Miyakogusa Predicted Gene
- Lj6g3v1970220.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1970220.1 tr|G7ILU6|G7ILU6_MEDTR U-box domain-containing
protein OS=Medicago truncatula GN=MTR_2g018010 PE=4
S,87.6,0,ANKYRIN-REPEAT-ARM DOMAIN PROTEIN,NULL; BETA CATENIN-RELATED
ARMADILLO REPEAT-CONTAINING,NULL; Arm,A,CUFF.60369.1
(715 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 | chr1:10... 793 0.0
AT5G01830.1 | Symbols: | ARM repeat superfamily protein | chr5:... 308 8e-84
AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 | chr3:17... 286 3e-77
AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 | chr3:20... 259 4e-69
AT1G23030.1 | Symbols: | ARM repeat superfamily protein | chr1:... 245 8e-65
AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 | chr2:12... 236 5e-62
AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 | chr5:16928086-16... 230 2e-60
AT1G71020.1 | Symbols: | ARM repeat superfamily protein | chr1:... 223 3e-58
AT1G71020.2 | Symbols: | ARM repeat superfamily protein | chr1:... 223 4e-58
AT1G60190.1 | Symbols: | ARM repeat superfamily protein | chr1:... 201 2e-51
AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 | chr1:34... 176 5e-44
AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23548... 153 5e-37
AT2G23140.2 | Symbols: | RING/U-box superfamily protein with AR... 140 2e-33
AT2G23140.1 | Symbols: | RING/U-box superfamily protein with AR... 140 3e-33
AT5G67340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 140 4e-33
AT5G18320.1 | Symbols: | ARM repeat superfamily protein | chr5:... 140 5e-33
AT3G54790.2 | Symbols: | ARM repeat superfamily protein | chr3:... 127 2e-29
AT3G54790.1 | Symbols: | ARM repeat superfamily protein | chr3:... 127 3e-29
AT3G01400.1 | Symbols: | ARM repeat superfamily protein | chr3:... 114 2e-25
AT5G58680.1 | Symbols: | ARM repeat superfamily protein | chr5:... 113 5e-25
AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 | chr4:11356143... 110 2e-24
AT1G67530.2 | Symbols: | ARM repeat superfamily protein | chr1:... 105 1e-22
AT1G67530.1 | Symbols: | ARM repeat superfamily protein | chr1:... 105 1e-22
AT1G24330.1 | Symbols: | ARM repeat superfamily protein | chr1:... 102 9e-22
AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 | chr1:97... 101 2e-21
AT1G49780.1 | Symbols: PUB26 | plant U-box 26 | chr1:18429024-18... 100 4e-21
AT3G19380.1 | Symbols: PUB25 | plant U-box 25 | chr3:6714602-671... 98 2e-20
AT4G16490.1 | Symbols: | ARM repeat superfamily protein | chr4:... 97 4e-20
AT5G37490.1 | Symbols: | ARM repeat superfamily protein | chr5:... 94 3e-19
AT5G18340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 94 3e-19
AT5G18330.1 | Symbols: | ARM repeat superfamily protein | chr5:... 93 6e-19
AT3G18710.1 | Symbols: PUB29, ATPUB29 | plant U-box 29 | chr3:64... 91 2e-18
AT5G65920.1 | Symbols: | ARM repeat superfamily protein | chr5:... 89 1e-17
AT3G49810.1 | Symbols: | ARM repeat superfamily protein | chr3:... 88 3e-17
AT3G52450.1 | Symbols: PUB22 | plant U-box 22 | chr3:19440943-19... 87 5e-17
AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | CYS, MET, PRO, and GLY p... 87 6e-17
AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY p... 86 7e-17
AT5G09800.1 | Symbols: | ARM repeat superfamily protein | chr5:... 86 8e-17
AT2G35930.1 | Symbols: PUB23 | plant U-box 23 | chr2:15083101-15... 81 2e-15
AT2G45920.1 | Symbols: | U-box domain-containing protein | chr2... 80 4e-15
AT3G07360.3 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23556... 80 5e-15
AT3G07360.2 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23556... 80 5e-15
AT1G01660.1 | Symbols: | RING/U-box superfamily protein | chr1:... 79 1e-14
AT1G08315.1 | Symbols: | ARM repeat superfamily protein | chr1:... 79 1e-14
AT4G36550.1 | Symbols: | ARM repeat superfamily protein | chr4:... 78 2e-14
AT3G61390.2 | Symbols: | RING/U-box superfamily protein | chr3:... 77 4e-14
AT5G62560.1 | Symbols: | RING/U-box superfamily protein with AR... 77 5e-14
AT3G11840.1 | Symbols: PUB24 | plant U-box 24 | chr3:3736578-373... 71 3e-12
AT1G56040.1 | Symbols: | HEAT/U-box domain-containing protein |... 71 3e-12
AT1G01680.1 | Symbols: ATPUB54, PUB54 | plant U-box 54 | chr1:24... 70 6e-12
AT4G12710.1 | Symbols: | ARM repeat superfamily protein | chr4:... 69 1e-11
AT2G45910.1 | Symbols: | U-box domain-containing protein kinase... 66 8e-11
AT5G65500.1 | Symbols: | U-box domain-containing protein kinase... 64 4e-10
AT5G57035.1 | Symbols: | U-box domain-containing protein kinase... 64 5e-10
AT5G51270.1 | Symbols: | U-box domain-containing protein kinase... 63 6e-10
AT5G40140.1 | Symbols: | RING/U-box superfamily protein with AR... 63 6e-10
AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 | senescence-associ... 62 1e-09
AT2G19410.1 | Symbols: | U-box domain-containing protein kinase... 62 1e-09
AT1G01670.1 | Symbols: | RING/U-box superfamily protein | chr1:... 62 1e-09
AT3G47820.1 | Symbols: PUB39 | PLANT U-BOX 39 | chr3:17644434-17... 62 1e-09
AT5G65200.1 | Symbols: PUB38, ATPUB38 | plant U-box 38 | chr5:26... 62 1e-09
AT4G31890.2 | Symbols: | ARM repeat superfamily protein | chr4:... 62 2e-09
AT4G31890.1 | Symbols: | ARM repeat superfamily protein | chr4:... 62 2e-09
AT3G03440.1 | Symbols: | ARM repeat superfamily protein | chr3:... 62 2e-09
AT1G76390.2 | Symbols: | ARM repeat superfamily protein | chr1:... 61 3e-09
AT1G76390.1 | Symbols: | ARM repeat superfamily protein | chr1:... 61 3e-09
AT3G49060.1 | Symbols: | U-box domain-containing protein kinase... 60 4e-09
AT3G49060.2 | Symbols: | U-box domain-containing protein kinase... 60 4e-09
AT4G25160.1 | Symbols: | U-box domain-containing protein kinase... 60 5e-09
AT5G61560.1 | Symbols: | U-box domain-containing protein kinase... 60 7e-09
AT5G61560.2 | Symbols: | U-box domain-containing protein kinase... 60 8e-09
AT1G66160.2 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY p... 59 2e-08
AT1G56030.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 3e-07
AT3G07370.1 | Symbols: ATCHIP, CHIP | carboxyl terminus of HSC70... 52 2e-06
>AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 |
chr1:10264412-10266601 FORWARD LENGTH=729
Length = 729
Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/737 (58%), Positives = 513/737 (69%), Gaps = 30/737 (4%)
Query: 1 MASGAIFASLRRRRSPTLDAFLAPVDLSDVALVQTLVAVAGELVSCFSKRPFFFQSKNSR 60
MAS AIF+SLRRRRSP+L+AFLAPVDLS VALVQTL +++ E+VSCF+ F FQ KN+R
Sbjct: 1 MASAAIFSSLRRRRSPSLEAFLAPVDLSGVALVQTLASISSEVVSCFTSVRFSFQRKNAR 60
Query: 61 SLIRKVEVFQLLLEYLSDSGSGACLPP--------------TAXXXXXXXXXXXXXXXXX 106
SLIRK+E+F +L E+L DS G+ TA
Sbjct: 61 SLIRKIEIFVVLFEFLVDSNWGSTTTRTRARRRSKSSVSESTALLCLKELYLLLYRSKIL 120
Query: 107 XXXCAQSSKLWLLLQNHSISGHFHDLNQEISTLLDVFPIKDVRLSKDVREQVELLQKQSR 166
CAQSSKLWLLLQN SISG+FHDLNQEISTLLDV P+ D+ LS D+REQ+ELLQ+QSR
Sbjct: 121 VDYCAQSSKLWLLLQNPSISGYFHDLNQEISTLLDVLPVNDLGLSDDIREQIELLQRQSR 180
Query: 167 RAKLFIDKKDDALRIRFFSFLDEFEKGQIPGSAELQSFYVDKLQILDASGCRNEIDALEE 226
+A+L+IDK D++LR F+SFLD FE G+IP S +L+ F+V+KL I D+ CR+EI+ LEE
Sbjct: 181 KARLYIDKNDESLRESFYSFLDGFENGKIPSSVDLRMFFVEKLGIRDSKSCRSEIEFLEE 240
Query: 227 QIVNHEGDIEPTISVLKGLVAMTRYCRXXXXXXXXXXXXXXXXSM-KKSKRRLITQEIAE 285
QIVNH+GD+EPT SV+ G VA+TRYCR + KK ++ + QEI +
Sbjct: 241 QIVNHDGDLEPTGSVINGFVAITRYCRFLLFGFEEDGMEWWIENNPKKPRKGFVAQEIGD 300
Query: 286 TFLTVPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVP 345
TF+TVPKDF CPISLDLM DPVIISTGQTY+R+SI+RW+EEGH TCPKTGQML +R+VP
Sbjct: 301 TFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIVP 360
Query: 346 NRALRNLIVQWCSAHGVPL-----DPPEVLEAEAFASACPXXXXXXXXXXXXXXXIQQLA 400
NRAL+NLIVQWC+A G+ D P E+FASA P I+ LA
Sbjct: 361 NRALKNLIVQWCTASGISYESEFTDSPN----ESFASALPTKAAVEANKATVSILIKYLA 416
Query: 401 NGSQFGKTIAAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQENSVTALLNLS 460
+GSQ +T+AAREIR LAKTG+ENRA+IAEAGAIP+L LL+S NA+AQENSVTA+LNLS
Sbjct: 417 DGSQAAQTVAAREIRLLAKTGKENRAYIAEAGAIPHLCRLLTSENAIAQENSVTAMLNLS 476
Query: 461 IFDKNKSRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGAVE 520
I++KNKSRIM+E CL SIV VL G T EA+ENAAATLFSLSAVH+YKK IA VE
Sbjct: 477 IYEKNKSRIMEEGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRIAIVDQCVE 536
Query: 521 ALAGLLQDGTPRGKKDAVTALFNLSTHTENCVRMIEXXXXXXXXXXXXXXXXXXXXXXXX 580
ALA LLQ+GTPRGKKDAVTAL+NLSTH +NC RMIE
Sbjct: 537 ALALLLQNGTPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVGALKNEGVAEEAAGAL 596
Query: 581 XXXXRQPIGAKAVVTEDEAVVGLIGMMRCGTPRGKENAVAALLELCRGGGAAATERVVKA 640
RQ +GA+A+ ED AV GL+GMMRCGTPRGKENAVAALLELCR GGAA E+V++A
Sbjct: 597 ALLVRQSLGAEAIGKEDSAVAGLMGMMRCGTPRGKENAVAALLELCRSGGAAVAEKVLRA 656
Query: 641 PALAGLLQTLLFTGTXXXXXXXXXXXXVFQRCENASLHYGGLGVGYALASNSAPTRDTSY 700
PA+AGLLQTLLFTGT VFQR ENA++ G Y N+ RD +
Sbjct: 657 PAIAGLLQTLLFTGTKRARRKAASLARVFQRRENAAMRSG----VYGFVGNTNGNRDGGF 712
Query: 701 AGDVSVP--MSISVPVL 715
DVSVP +SISVPVL
Sbjct: 713 TTDVSVPISISISVPVL 729
>AT5G01830.1 | Symbols: | ARM repeat superfamily protein |
chr5:320983-323007 FORWARD LENGTH=674
Length = 674
Score = 308 bits (789), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 208/647 (32%), Positives = 318/647 (49%), Gaps = 31/647 (4%)
Query: 11 RRRRSPTLDAFLAPVDLSDVALVQTLVAVAGELVSCFSKRPFFFQSKNSRSLIRKVEVFQ 70
R+RR + +F +P SD L ++L + E +S PF + +NS SLIRKV++
Sbjct: 12 RKRRPLVVGSFESPKLSSDTKLTRSLFLASHE-ISSMQPLPFILR-RNSLSLIRKVKILA 69
Query: 71 LLL-EYLSDSGSGACLPPTAXXXXXXXXXXXXXXXXXXXXCAQSSKLWLLLQNHSISGHF 129
+ E L +A C++ SKLWLLLQ ++ +F
Sbjct: 70 SVFDELLLPRSQLVVYSQSAHLCFEEMQIVMQRIKSLIDDCSRVSKLWLLLQIDIVAFNF 129
Query: 130 HDLNQEISTLLDVFPIKDVRLSKDVREQVELLQKQSRRAKLFIDKKDDALRIRFFSFLDE 189
H+L ++ST+LD+ P+ D LS D ++ + LL KQ + F+D +D ALR + +
Sbjct: 130 HELVTDLSTVLDILPLHDFDLSDDAQDLISLLTKQCSDSVQFVDARDVALRRKVTDTIAG 189
Query: 190 FEKGQIPGSAELQSFYVDKLQILDASGCRNEIDALEEQIVNHEGDIEPTISVLKGLVAMT 249
+ P + L + D L + D++ +EI LE++I + D + S L+ +
Sbjct: 190 IKHQISPDHSTLIKIFND-LGLSDSASLTDEIQRLEDEIQDQIDD--RSKSAAASLIGLV 246
Query: 250 RYCRXXXXXXXXXXXXXXXXSMKKSKRRLITQEIAETFLTVPKDFCCPISLDLMRDPVII 309
RY + + RR Q +++ +P DF CPI+L+LMRDPV++
Sbjct: 247 RYSKCVLYGPS---------TPAPDFRR--HQSLSDA--NIPADFRCPITLELMRDPVVV 293
Query: 310 STGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRALRNLIVQWCSAHGVPLDPPEV 369
+TGQTY+R SI W++ GH TCPKTGQ+L H LVPNRAL+NLIV WC +P +
Sbjct: 294 ATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRALKNLIVLWCRDQKIPFE---- 349
Query: 370 LEAEAFASACPXXXXXXXXXXXXXXXIQQLANGSQFGKTIAAREIRFLAKTGRENRAFIA 429
L + P I++L+ G E+R LAK+ RA IA
Sbjct: 350 LYGDGGGEPAPCKEAVEFTKMMVSFLIEKLSVADSNGVVF---ELRALAKSDTVARACIA 406
Query: 430 EAGAIPYLRNLLSSHNAVAQENSVTALLNLSIFDKNKSRIMDEEGCLGSIVDVLRFGHTT 489
EAGAIP L L++ Q N+VT +LNLSI ++NK+RIM+ +G L +++VLR G T
Sbjct: 407 EAGAIPKLVRYLATECPSLQINAVTTILNLSILEQNKTRIMETDGALNGVIEVLRSGATW 466
Query: 490 EARENAAATLFSLSAVHDYKKVIADRTGAVEALAGLLQDGTPRGKKDAVTALFNLSTHTE 549
EA+ NAAATLFSL+ V Y++ + + V L L + G K+DA+ A+ NL E
Sbjct: 467 EAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVDLAKQGPTSSKRDALVAILNLVAERE 526
Query: 550 NCVRMIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQPIGAKAVVTEDEAVVGLIG-MMR 608
N R +E G V+ +++ L+G +MR
Sbjct: 527 NVGRFVEAGVMGAAGDAFQELPEEAVAVVEAVVRR----GGLMAVSAAFSLIRLLGEVMR 582
Query: 609 CGTPRGKENAVAALLELCRGGGAAATERVVKAPALAGLLQTLLFTGT 655
G +E+A A L+ +CR GG+ + P + ++ ++ GT
Sbjct: 583 EGADTTRESAAATLVTMCRKGGSELVAEMAAIPGIERVIWEMIGAGT 629
>AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 |
chr3:17124106-17126539 REVERSE LENGTH=660
Length = 660
Score = 286 bits (733), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 189/522 (36%), Positives = 265/522 (50%), Gaps = 18/522 (3%)
Query: 110 CAQSSKLWLLLQNHSISGHFHDLNQEISTLLDVFPIKDVRLSKDVREQVELLQKQSRRAK 169
C+Q SK++L+++ ++ +++ ++ L P +++ +S +VREQVEL+ Q RRAK
Sbjct: 82 CSQGSKIYLVMEREQVTSKLMEVSVKLEQSLSQIPYEELDISDEVREQVELVLSQFRRAK 141
Query: 170 LFIDKKDDALRIRFFSFLDEFEKGQIPGSAELQSFYVDKLQILDASGCRNEIDALEEQIV 229
+D DD L S ++ + + KL +++ E AL E +
Sbjct: 142 GRVDVSDDELYEDLQSLCNK--SSDVDAYQPVLERVAKKLHLMEIPDLAQESVALHEMVA 199
Query: 230 NHEGDIEPTISVLKGLVAMTRYCRXXXXXXXXXXXXXXXXSMKKSKRRLITQEIAETFLT 289
+ GD+ I + ++ M + +Q+I
Sbjct: 200 SSGGDVGENIEEMAMVLKMIKDFVQTEDDNGEEQKVGVNSRSNGQTSTAASQKIP----V 255
Query: 290 VPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRAL 349
+P DF CPISL++MRDPVI+S+GQTYER+ I +W+E GH+TCPKT Q L L PN L
Sbjct: 256 IPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVL 315
Query: 350 RNLIVQWCSAHGV-PLDPPEVLEAEAFASACPXXXXXXXXXXXXXXXIQQLANGSQFGKT 408
R+LI QWC A+ + P PP L +S + +LA G+ +
Sbjct: 316 RSLIAQWCEANDIEPPKPPSSLRPRKVSS-----FSSPAEANKIEDLMWRLAYGNPEDQR 370
Query: 409 IAAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQENSVTALLNLSIFDKNKSR 468
AA EIR LAK +NR IAEAGAIP L LLS+ ++ QE+SVTALLNLSI + NK
Sbjct: 371 SAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENNKGA 430
Query: 469 IMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGAVEALAGLLQD 528
I+ G + IV VL+ G + EARENAAATLFSLS + D KV GA+ L LL +
Sbjct: 431 IVS-AGAIPGIVQVLKKG-SMEARENAAATLFSLSVI-DENKVTIGALGAIPPLVVLLNE 487
Query: 529 GTPRGKKDAVTALFNLSTHTENCVRMIEXXXXXXXXXXXXX--XXXXXXXXXXXXXXXRQ 586
GT RGKKDA TALFNL + N + I
Sbjct: 488 GTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAILSSH 547
Query: 587 PIGAKAVVTEDEAVVGLIGMMRCGTPRGKENAVAALLELCRG 628
P G KA++ +AV L+ +R G+PR +ENA A L+ LC G
Sbjct: 548 PEG-KAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSG 588
>AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 |
chr3:20321524-20323848 FORWARD LENGTH=632
Length = 632
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 189/522 (36%), Positives = 269/522 (51%), Gaps = 37/522 (7%)
Query: 114 SKLWLLLQNHSISGHFHDLNQEISTLLDVFPIKDVRLSKDVREQVELLQKQSRRAKLFID 173
SKL+ L S+ F D+ EI L P + + +S++VREQV+LL Q +RAK +
Sbjct: 90 SKLFQLFDRDSLVEKFRDMTVEIEAALSQIPYEKIEVSEEVREQVQLLHFQFKRAKERWE 149
Query: 174 KKDDALRIRFFSFLDEFEKGQIPGSAELQSFYVDKLQILDASGCRNEIDALEEQIVNHEG 233
+ D ++ L E P L+ +LQ+ + E A+ E ++++G
Sbjct: 150 ESD----LQLSHDLAMAENVMDPDPIILKRLS-QELQLTTIDELKKESHAIHEYFLSYDG 204
Query: 234 D----IEPTISVLKGLVAMTRYCRXXXXXXXXXXXXXXXXSMKKSKRRLITQEIAETFLT 289
D E S+LK LV + R++++ +
Sbjct: 205 DPDDCFERMSSLLKNLVDFV--------------TMESSDPDPSTGSRIVSRHRSPV--- 247
Query: 290 VPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRAL 349
+P+ F CPISL+LM+DPVI+STGQTYERSSI +W++ GH TCPK+ + L H L PN L
Sbjct: 248 IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVL 307
Query: 350 RNLIVQWCSAHGVPLDPPEVLEAEAFASACPXXXXXXXXXXXXXXXIQQLANGSQFGKTI 409
++LI WC ++G+ L P+ + + +++LANG+ +
Sbjct: 308 KSLIALWCESNGIEL--PQN-QGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQRA 364
Query: 410 AAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQENSVTALLNLSIFDKNKSRI 469
AA E+R LAK +NR IAEAGAIP L LLSS + QE+SVTALLNLSI + NK I
Sbjct: 365 AAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSINEGNKGAI 424
Query: 470 MDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGAVEALAGLLQDG 529
+D G + IV+VL+ G + EARENAAATLFSLS + D KV GA++AL LL++G
Sbjct: 425 VD-AGAITDIVEVLKNG-SMEARENAAATLFSLSVI-DENKVAIGAAGAIQALISLLEEG 481
Query: 530 TPRGKKDAVTALFNLSTHTENCVRMIEXXXXXXXXXXXXXX---XXXXXXXXXXXXXXRQ 586
T RGKKDA TA+FNL + N R ++ Q
Sbjct: 482 TRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAILSTNQ 541
Query: 587 PIGAKAVVTEDEAVVGLIGMMRCGTPRGKENAVAALLELCRG 628
K + E E++ L+ ++R G+PR +ENA A L LC G
Sbjct: 542 E--GKTAIAEAESIPVLVEIIRTGSPRNRENAAAILWYLCIG 581
>AT1G23030.1 | Symbols: | ARM repeat superfamily protein |
chr1:8156745-8158842 FORWARD LENGTH=612
Length = 612
Score = 245 bits (625), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 145/342 (42%), Positives = 192/342 (56%), Gaps = 15/342 (4%)
Query: 288 LTVPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNR 347
LT+P DF CP+SL+LM+DPVI++TGQTYER+ I RW++ G+ TCPKT Q L + L PN
Sbjct: 239 LTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTPNY 298
Query: 348 ALRNLIVQWCSAHGVPLDPPEVLEAEAFASACPXXXXXXXXXXXXXXXIQQLANGSQFGK 407
LR+LI +WC+ H + E A +Q+L++ S +
Sbjct: 299 VLRSLISRWCAEHNI----------EQPAGYINGRTKNSGDMSVIRALVQRLSSRSTEDR 348
Query: 408 TIAAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQENSVTALLNLSIFDKNKS 467
A EIR L+K +NR IAEAGAIP L NLL+S + QEN++T +LNLSI++ NK
Sbjct: 349 RNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQENAITCVLNLSIYENNKE 408
Query: 468 RIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGAVEALAGLLQ 527
IM G + SIV VLR G T EARENAAATLFSLS + D K+I +GA+ AL LL+
Sbjct: 409 LIM-FAGAVTSIVQVLRAG-TMEARENAAATLFSLS-LADENKIIIGGSGAIPALVDLLE 465
Query: 528 DGTPRGKKDAVTALFNLSTHTENCVRMIEX--XXXXXXXXXXXXXXXXXXXXXXXXXXXR 585
+GTPRGKKDA TALFNL + N R +
Sbjct: 466 NGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLA 525
Query: 586 QPIGAKAVVTEDEAVVGLIGMMRCGTPRGKENAVAALLELCR 627
AK+ + + + LIG+++ R +ENA A LL LC+
Sbjct: 526 NNQDAKSAIVKANTLPALIGILQTDQTRNRENAAAILLSLCK 567
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 79/187 (42%), Gaps = 43/187 (22%)
Query: 396 IQQLANGSQFGKTIAAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQENSVTA 455
+Q L G+ + AA + F EN+ I +GAIP L +LL + ++++ TA
Sbjct: 420 VQVLRAGTMEARENAAATL-FSLSLADENKIIIGGSGAIPALVDLLENGTPRGKKDAATA 478
Query: 456 LLNLSIFDKNKSR---------------------IMDEE--------------------G 474
L NL I+ NK R ++DE
Sbjct: 479 LFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDAKSAIVKAN 538
Query: 475 CLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGAVEALAGLLQDGTPRGK 534
L +++ +L+ T RENAAA L SL K + R GAV L L ++GT RGK
Sbjct: 539 TLPALIGILQTDQTRN-RENAAAILLSLCKRDTEKLITIGRLGAVVPLMDLSKNGTERGK 597
Query: 535 KDAVTAL 541
+ A++ L
Sbjct: 598 RKAISLL 604
>AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 |
chr2:12367001-12370608 REVERSE LENGTH=962
Length = 962
Score = 236 bits (602), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 176/519 (33%), Positives = 262/519 (50%), Gaps = 19/519 (3%)
Query: 114 SKLWLLLQNHSISGHFHDLNQEISTLLDVFPIKDVRLSKDVREQVELLQKQSRRA--KLF 171
SK++L+L+ + F + + L + P +++ +S +++EQVEL+ Q RR+ K
Sbjct: 86 SKIYLVLERDQVMVKFQKVTSLLEQALSIIPYENLEISDELKEQVELVLVQLRRSLGKRG 145
Query: 172 IDKKDDALRIRFFSFLDEFEKGQIPGSAELQSFYVDKLQILDASGCRNEIDALEEQIVNH 231
D DD L S +G + S ++ +KLQ++ + E AL + + +
Sbjct: 146 GDVYDDELYKDVLSLYSG--RGSVMES-DMVRRVAEKLQLMTITDLTQESLALLDMVSSS 202
Query: 232 EGDIEPTISVLKGLVAMTRYCRXXXXXXXXXXXXXXXXSMKKSKRRLITQEIAETFLTVP 291
GD +P S K M+ + ++ +++ L P
Sbjct: 203 GGD-DPGESFEK----MSMVLKKIKDFVQTYNPNLDDAPLRLKSSLPKSRDDDRDMLIPP 257
Query: 292 KDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRALRN 351
++F CPISL+LM DPVI+S+GQTYER I +W+E GH TCPKT + L + + PN LR+
Sbjct: 258 EEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTSDIMTPNYVLRS 317
Query: 352 LIVQWCSAHGV-PLDPPEVLEAEAFASACPXXXXXXXXXXXXXXXIQQLANGSQFGKTIA 410
LI QWC ++G+ P P + + + AS+ + +L + + A
Sbjct: 318 LIAQWCESNGIEPPKRPNISQPSSKASS--SSSAPDDEHNKIEELLLKLTSQQPEDRRSA 375
Query: 411 AREIRFLAKTGRENRAFIAEAGAIPYLRNLLS-SHNAVAQENSVTALLNLSIFDKNKSRI 469
A EIR LAK NR IA +GAIP L NLL+ S+++ QE++VT++LNLSI +NK +I
Sbjct: 376 AGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHAVTSILNLSICQENKGKI 435
Query: 470 MDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGAVEALAGLLQDG 529
+ G + IV VL+ G + EARENAAATLFSLS + D KV GA+ L LL +G
Sbjct: 436 VYSSGAVPGIVHVLQKG-SMEARENAAATLFSLSVI-DENKVTIGAAGAIPPLVTLLSEG 493
Query: 530 TPRGKKDAVTALFNLSTHTENCVRMIEX--XXXXXXXXXXXXXXXXXXXXXXXXXXXRQP 587
+ RGKKDA TALFNL N + + P
Sbjct: 494 SQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESGMVDESLSILAILSSHP 553
Query: 588 IGAKAVVTEDEAVVGLIGMMRCGTPRGKENAVAALLELC 626
G K+ V +AV L+ +R G+PR KEN+ A L+ LC
Sbjct: 554 DG-KSEVGAADAVPVLVDFIRSGSPRNKENSAAVLVHLC 591
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 41/163 (25%)
Query: 423 ENRAFIAEAGAIPYLRNLLSSHNAVAQENSVTALLNLSIFDKNKSR-------------- 468
EN+ I AGAIP L LLS + ++++ TAL NL IF NK +
Sbjct: 472 ENKVTIGAAGAIPPLVTLLSEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLL 531
Query: 469 ------IMDEEGCLGSI--------------------VDVLRFGHTTEARENAAATLFSL 502
++DE + +I VD +R G + +EN+AA L L
Sbjct: 532 TEPESGMVDESLSILAILSSHPDGKSEVGAADAVPVLVDFIRSG-SPRNKENSAAVLVHL 590
Query: 503 SAVHDYKKVIADRTGAVEALAGLLQDGTPRGKKDAVTALFNLS 545
+ + + A + G ++ L + ++GT RGK+ A L S
Sbjct: 591 CSWNQQHLIEAQKLGIMDLLIEMAENGTDRGKRKAAQLLNRFS 633
>AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 |
chr5:16928086-16930367 REVERSE LENGTH=660
Length = 660
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 165/521 (31%), Positives = 259/521 (49%), Gaps = 37/521 (7%)
Query: 110 CAQSSKLWLLLQNHSISGHFHDLNQEISTLLDVFPIKDVRLSKDVREQVELLQKQSRRAK 169
C+ SK+++ L ++ FH + ++++ +L P ++ +S D +++++ L KQ ++AK
Sbjct: 124 CSNGSKIYMALDGETMMTRFHSIYEKLNRVLVKAPFDELMISGDAKDEIDSLCKQLKKAK 183
Query: 170 LFIDKKDDALRIRFFSFLDEFEKGQIPGSAE--LQSFYVDKLQILDASGCRNEIDALEEQ 227
D +D L + + + P +A+ + KL++ + E A++
Sbjct: 184 RRTDTQDIELAVDMMVVFSKTD----PRNADSAIIERLAKKLELQTIDDLKTETIAIQSL 239
Query: 228 IVNHEG-DIEPTISVLKGLVAMTRYCRXXXXXXXXXXXXXXXXSMKKSKRRLITQEIAET 286
I + G +IE +++ L + ++ KS T
Sbjct: 240 IQDKGGLNIETKQHIIELLNKFKKL--QGLEATDILYQPVINKAITKS-----------T 286
Query: 287 FLTVPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPN 346
L +P +F CPI+L++M DPVII+TGQTYE+ SI +W + GH TCPKT Q L H L PN
Sbjct: 287 SLILPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPN 346
Query: 347 RALRNLIVQWCSAHGVPLDPPEVLEAEAFASACPXXXXXXXXXXXXXXXIQQLANGSQFG 406
AL+NLI+QWC + + EV ++ L++
Sbjct: 347 FALKNLIMQWCEKNNFKIPEKEV-----------SPDSQNEQKDEVSLLVEALSSSQLEE 395
Query: 407 KTIAAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQENSVTALLNLSIFDKNK 466
+ + +++R LA+ ENR IA AGAIP L LLS ++ QEN+VT LLNLSI + NK
Sbjct: 396 QRRSVKQMRLLARENPENRVLIANAGAIPLLVQLLSYPDSGIQENAVTTLLNLSIDEVNK 455
Query: 467 SRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGAVEALAGLL 526
+++ EG + +I+++L G+ EAREN+AA LFSLS + D KV + + L LL
Sbjct: 456 -KLISNEGAIPNIIEILENGN-REARENSAAALFSLSML-DENKVTIGLSNGIPPLVDLL 512
Query: 527 QDGTPRGKKDAVTALFNLSTHTENCVRMIEX--XXXXXXXXXXXXXXXXXXXXXXXXXXX 584
Q GT RGKKDA+TALFNLS ++ N R I+
Sbjct: 513 QHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMIDEALSILLLLA 572
Query: 585 RQPIGAKAVVTEDEAVVGLIGMMRCGTPRGKENAVAALLEL 625
P G +A + + + L+ +R GTP+ KE A + LLEL
Sbjct: 573 SHPEGRQA-IGQLSFIETLVEFIRQGTPKNKECATSVLLEL 612
>AT1G71020.1 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26793105 REVERSE LENGTH=628
Length = 628
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 144/343 (41%), Positives = 188/343 (54%), Gaps = 8/343 (2%)
Query: 288 LTVPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNR 347
LT+P+DF CPISL+LM+DP I+STGQTYERS I RW++ G+ +CPKT Q L + L PN
Sbjct: 241 LTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNY 300
Query: 348 ALRNLIVQWCSAHGVPLDPPEVLEAEAFASACPXXXXXXXXXXXXXXXIQQLANGSQFGK 407
LR+LI QWC+ H + + P ++ + +L++ S +
Sbjct: 301 VLRSLISQWCTKHNI--EQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIEDR 358
Query: 408 TIAAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSH-NAVAQENSVTALLNLSIFDKNK 466
A EIR L+K +NR IAEAGAIP L LL+S + QEN+VT +LNLSI++ NK
Sbjct: 359 RTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIYEHNK 418
Query: 467 SRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGAVEALAGLL 526
IM G + SIV VLR G + EARENAAATLFSLS + D K+I +GA+ AL LL
Sbjct: 419 ELIM-LAGAVTSIVLVLRAG-SMEARENAAATLFSLS-LADENKIIIGASGAIMALVDLL 475
Query: 527 QDGTPRGKKDAVTALFNLSTHTENCVRMIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQ 586
Q G+ RGKKDA TALFNL + N R +
Sbjct: 476 QYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADEALTILSVL 535
Query: 587 PIG--AKAVVTEDEAVVGLIGMMRCGTPRGKENAVAALLELCR 627
AK + A+ LI ++ PR +ENA A LL LC+
Sbjct: 536 ASNQVAKTAILRANAIPPLIDCLQKDQPRNRENAAAILLCLCK 578
>AT1G71020.2 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26792357 REVERSE LENGTH=480
Length = 480
Score = 223 bits (568), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 144/343 (41%), Positives = 188/343 (54%), Gaps = 8/343 (2%)
Query: 288 LTVPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNR 347
LT+P+DF CPISL+LM+DP I+STGQTYERS I RW++ G+ +CPKT Q L + L PN
Sbjct: 93 LTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNY 152
Query: 348 ALRNLIVQWCSAHGVPLDPPEVLEAEAFASACPXXXXXXXXXXXXXXXIQQLANGSQFGK 407
LR+LI QWC+ H + + P ++ + +L++ S +
Sbjct: 153 VLRSLISQWCTKHNI--EQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIEDR 210
Query: 408 TIAAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSH-NAVAQENSVTALLNLSIFDKNK 466
A EIR L+K +NR IAEAGAIP L LL+S + QEN+VT +LNLSI++ NK
Sbjct: 211 RTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIYEHNK 270
Query: 467 SRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGAVEALAGLL 526
IM G + SIV VLR G + EARENAAATLFSLS + D K+I +GA+ AL LL
Sbjct: 271 ELIM-LAGAVTSIVLVLRAG-SMEARENAAATLFSLS-LADENKIIIGASGAIMALVDLL 327
Query: 527 QDGTPRGKKDAVTALFNLSTHTENCVRMIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQ 586
Q G+ RGKKDA TALFNL + N R +
Sbjct: 328 QYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADEALTILSVL 387
Query: 587 PIG--AKAVVTEDEAVVGLIGMMRCGTPRGKENAVAALLELCR 627
AK + A+ LI ++ PR +ENA A LL LC+
Sbjct: 388 ASNQVAKTAILRANAIPPLIDCLQKDQPRNRENAAAILLCLCK 430
>AT1G60190.1 | Symbols: | ARM repeat superfamily protein |
chr1:22198403-22200463 FORWARD LENGTH=686
Length = 686
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 180/662 (27%), Positives = 295/662 (44%), Gaps = 54/662 (8%)
Query: 13 RRSPTLDAFLAPVDLSDVALVQTLVAVAGELVSCFSKRPFFFQSKNSRSLIRKVEVFQLL 72
RR T A +S LV +L+ +AGE++S F + F ++ + +R V+ +
Sbjct: 10 RRILTFPAVNPCESISLTTLVDSLLQLAGEILS-FKPKHFSTNKRSVKETLRHVQTLVIF 68
Query: 73 LEYLSDSGSGACLPP--TAXXXXXXXXXXXXXXXXXXXXCAQS-SKLWLLLQNHSISGHF 129
E L +P + C + +KL++L+ + +S HF
Sbjct: 69 FEELRIQIRVGSIPAGRSVILSLSELHVIFQKLKFLLDDCTRDGAKLYMLMNSGQVSAHF 128
Query: 130 HDLNQEISTLLDVFPIKDVRLSKDVREQVELLQKQSRRAKLFIDKKDDALRIRFFSFLDE 189
DL + IST LD FP++ V L +V E + L+ +Q+R+++ D+ D + F +
Sbjct: 129 RDLTRSISTSLDTFPVRSVDLPGEVNELIYLVMRQTRKSEARPDRDDKRAIDSVYWFFNL 188
Query: 190 FEKGQIPGSAELQSFYVDKLQILDASGCRNEIDALEEQI-VNHEGDIEPTISVLKGLVAM 248
FE P S E+ +D + + C EID L E+I V + +IE I +L L+
Sbjct: 189 FENRINPNSDEILRV-LDHIGVRKWRDCVKEIDFLREEISVGKKSNIE--IELLSNLMGF 245
Query: 249 TRYCRXXXXXXXXXXXXXXXXSMKKSKRRLITQEIAETFLTVPKDFCCPISLDLMRDPVI 308
YCR + ++ ++ D CPISL++M DPV+
Sbjct: 246 ICYCR---------CVILRGIDVDDEEKDKEEDDLMMVRSLNVDDLRCPISLEIMSDPVV 296
Query: 309 ISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRALRNLIVQWCSAHGVPL---D 365
+ +G TY+RSSI++W G+ TCPKTG+ L LV N +++ +I + +GV +
Sbjct: 297 LESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQVIQSYSKQNGVVMGQKG 356
Query: 366 PPEVLEAEAFASACPXXXXXXXXXXXXXXXIQQLANGSQFGKTIAAREIRFLAKTGRENR 425
+V AE+ A+ +L G + A EIR L KT R
Sbjct: 357 KKKVDVAESLAAE-------EAGKLTAEFLAGELIKGDEEEMVKALVEIRILTKTSTFYR 409
Query: 426 AFIAEAGAIPYLRNLLSSHNAVAQENSVTALLNLSIFDKNKSRIMDEE-GCLGSIVDVLR 484
+ + EAG + L +L S + QEN++ ++NLS K+RI+ E+ G L IV+VL
Sbjct: 410 SCLVEAGVVESLMKILRSDDPRIQENAMAGIMNLSKDIAGKTRIVGEDGGGLRLIVEVLN 469
Query: 485 FGHTTEARENAAATLFSLSAVHDYKKVIADRTGAVEALAGLLQ--DGTPRGKKDAVTALF 542
G E+R+ AAA LF LS++ DY ++I + + A+ L +++ D K++A+ A+
Sbjct: 470 DGARRESRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVRIVKSCDYGDSAKRNALIAIR 529
Query: 543 N-LSTHTENCVRMIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQPIGAKAVVTEDEAVV 601
+ L +N R++ I AK D
Sbjct: 530 SLLMNQPDNHWRIL-----AAGIVPVLLDLVKSEEISDGVTADSMAILAKMAEYPD---- 580
Query: 602 GLIGMMRCG--------------TPRGKENAVAALLELCRGGGAAATERVVKAPALAGLL 647
G+I ++R G +P K++ VA LL LC GG+ + K P++ G L
Sbjct: 581 GMISVLRRGGLKLAVKILGSSEVSPATKQHCVALLLNLCHNGGSDVVGSLAKNPSIMGSL 640
Query: 648 QT 649
T
Sbjct: 641 YT 642
>AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 |
chr1:3484613-3486706 FORWARD LENGTH=697
Length = 697
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 151/574 (26%), Positives = 252/574 (43%), Gaps = 61/574 (10%)
Query: 13 RRSPTLDAFLAPVDLSDVALVQTLVAVAGELVSCFSKRPFFFQSKNSRSLIRKVEVFQLL 72
RR T +S V L+ +L+ +AG++++ F + F ++ R +R+++ ++
Sbjct: 10 RRILTFPTVEPSESISIVTLLDSLIQLAGDILT-FKSKHFSTNKQSFRETLRRIQNLLVV 68
Query: 73 LE-----------YLSDSGSGACLPPTAXXXXXXXXXXXXXXXXXXXXCAQS-SKLWLLL 120
E Y DS + + L C + ++L +++
Sbjct: 69 FEEIRIRIRNSRRYFHDSAAASSLKEI--------HVGFQKLKFLLEDCTRDGARLCMMM 120
Query: 121 QNHSISGHFHDLNQEISTLLDVFPIKDVRLSKDVREQVELLQKQSRRAKLFIDKKDDALR 180
+ +S H L + IST L FP+ V L+ +V E ++L+ +Q+R+ + + D
Sbjct: 121 NSDQVSDHLRVLTRSISTSLSAFPVASVDLTTEVNELIDLVVRQARKYGVQPETNDKRAV 180
Query: 181 IRFFSFLDEFEKGQIPGSAELQSFYVDKLQILDASGCRNEIDALEEQIVNHEGDIEPT-- 238
L F +P E+ +D + I C EI+ L E+I D +
Sbjct: 181 SSINRILALFVNRVVPDPDEINRI-LDHVGIRKWGDCVKEINFLGEEIDAERLDEKKKKS 239
Query: 239 ---ISVLKGLVAMTRYCRXXXXXXXXXXXXXXXXSMKKSKRRLITQEIAETFLTVPKDFC 295
+ +L L+ YCR K + + + +D
Sbjct: 240 SDQVELLSSLMGFICYCRCIILGRIERDDHHNHHEDGIKKDHDLIRGLK------VEDLL 293
Query: 296 CPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRALRNLIVQ 355
CPISL++M DPV+I TG TY+RSSI++W G+ TCP TG++L LV N ++R +I +
Sbjct: 294 CPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDNVSVRQVIRK 353
Query: 356 WCSAHGVPLDP------------PEVLEAEAFASACPXXXXXXXXXXXXXXXIQQLANGS 403
C +G+ L PE L A+ +L NG
Sbjct: 354 HCKTNGIVLAGISRRRKSHDDVVPESLAAKGAGKLIAKFLT------------SELINGG 401
Query: 404 QFGKTIAAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQENSVTALLNLSIFD 463
+ A REIR KT NR+ + +AGA+ L LLSS + QEN++ +LNLS
Sbjct: 402 EEMIYRAVREIRVQTKTSSFNRSCLVKAGAVTPLLKLLSSVDIRIQENAMAGILNLSKHV 461
Query: 464 KNKSRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGAVEALA 523
KS+I E L +V++L G TE R +A+ LF LS+V DY ++I + A+ L
Sbjct: 462 TGKSKIAGE--GLKILVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPGLM 519
Query: 524 GLLQ--DGTPRGKKDAVTALFNLSTHTENCVRMI 555
+++ D K+ A+ A+ L ++N R++
Sbjct: 520 NIVKGDDYGDSAKRSALLAVMGLLMQSDNHWRVL 553
>AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
chr3:2354884-2356613 FORWARD LENGTH=460
Length = 460
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 154/283 (54%), Gaps = 21/283 (7%)
Query: 282 EIAETFLTVPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHN 341
E+ ET ++ P++F CP+S +LMRDPV++++GQTY++ I +W+ G+ TCPKT Q+L H
Sbjct: 67 EMLET-VSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHT 125
Query: 342 RLVPNRALRNLIVQWCSAHGVP----LDPPEVLEAEAFASACPXXXXXXXXXXXXXXXIQ 397
L PN +R +I +WC +G+ P V E E + +
Sbjct: 126 ALTPNLLIREMISKWCKKNGLETKSQYHPNLVNEDETVTRS---------DREIFNSLLC 176
Query: 398 QLANGSQFGKTIAAREIRFLAKTGRENRAFIAEA-GAIPYLRNLL---SSHNAVAQENSV 453
++++ + + AA+E+R L + G E RA E+ I L N L S+ + QE+ V
Sbjct: 177 KVSSSNLQDQKSAAKELRLLTRKGTEFRALFGESPDEITRLVNPLLHGSNPDEKLQEDVV 236
Query: 454 TALLNLSIF-DKNKSRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVI 512
T LLN+SI D NK + + + ++D LR G T R NAAA +F+LSA+ D KV+
Sbjct: 237 TTLLNISIHDDSNKKLVCENPNVIPLLIDALRRG-TVATRSNAAAAIFTLSAL-DSNKVL 294
Query: 513 ADRTGAVEALAGLLQDGTPRGKKDAVTALFNLSTHTENCVRMI 555
++G ++ L LL++G P KD A+F L EN R +
Sbjct: 295 IGKSGILKPLIDLLEEGNPLAIKDVAAAIFTLCIAHENRSRAV 337
>AT2G23140.2 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9848762 REVERSE LENGTH=826
Length = 826
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 128/235 (54%), Gaps = 3/235 (1%)
Query: 396 IQQLANGSQFGKTIAAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQENSVTA 455
+++L + S + A E+R LAK +NR I +GAI L LL S ++ QEN+VTA
Sbjct: 547 VEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQENAVTA 606
Query: 456 LLNLSIFDKNKSRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADR 515
LLNLSI D NK I D G + ++ VL G ++EA+EN+AATLFSLS + + K I +
Sbjct: 607 LLNLSINDNNKKAIAD-AGAIEPLIHVLENG-SSEAKENSAATLFSLSVIEENKIKIG-Q 663
Query: 516 TGAVEALAGLLQDGTPRGKKDAVTALFNLSTHTENCVRMIEXXXXXXXXXXXXXXXXXXX 575
+GA+ L LL +GTPRGKKDA TALFNLS H EN +++
Sbjct: 664 SGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLMDPAAGMVD 723
Query: 576 XXXXXXXXXRQPIGAKAVVTEDEAVVGLIGMMRCGTPRGKENAVAALLELCRGGG 630
+ + ++ + L+ ++ G+ RGKENA AALL+L G
Sbjct: 724 KAVAVLANLATIPEGRNAIGQEGGIPLLVEVVELGSARGKENAAAALLQLSTNSG 778
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 60/93 (64%)
Query: 275 KRRLITQEIAETFLTVPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKT 334
+R L+ ++ + + + DF CP+SL++M DPVI+S+GQTYE++ I RW++ G CPKT
Sbjct: 215 ERLLLIKQTQTSSVAILADFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKT 274
Query: 335 GQMLGHNRLVPNRALRNLIVQWCSAHGVPLDPP 367
Q L H L+PN ++ LI WC + V L P
Sbjct: 275 RQTLTHTTLIPNYTVKALIANWCETNDVKLPDP 307
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Query: 399 LANGSQFGKTIAAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQENSVTALLN 458
L NG+ GK AA + F +EN+A I ++GA+ YL +L+ + + +V L N
Sbjct: 674 LGNGTPRGKKDAATAL-FNLSIHQENKAMIVQSGAVRYLIDLMDPAAGMV-DKAVAVLAN 731
Query: 459 LSIFDKNKSRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGA 518
L+ + ++ I +EG + +V+V+ G + +ENAAA L LS + + GA
Sbjct: 732 LATIPEGRNAI-GQEGGIPLLVEVVELG-SARGKENAAAALLQLSTNSGRFCNMVLQEGA 789
Query: 519 VEALAGLLQDGTPRGKKDA 537
V L L Q GTPR ++ A
Sbjct: 790 VPPLVALSQSGTPRAREKA 808
>AT2G23140.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9849105 REVERSE LENGTH=829
Length = 829
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 128/235 (54%), Gaps = 3/235 (1%)
Query: 396 IQQLANGSQFGKTIAAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQENSVTA 455
+++L + S + A E+R LAK +NR I +GAI L LL S ++ QEN+VTA
Sbjct: 550 VEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQENAVTA 609
Query: 456 LLNLSIFDKNKSRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADR 515
LLNLSI D NK I D G + ++ VL G ++EA+EN+AATLFSLS + + K I +
Sbjct: 610 LLNLSINDNNKKAIAD-AGAIEPLIHVLENG-SSEAKENSAATLFSLSVIEENKIKIG-Q 666
Query: 516 TGAVEALAGLLQDGTPRGKKDAVTALFNLSTHTENCVRMIEXXXXXXXXXXXXXXXXXXX 575
+GA+ L LL +GTPRGKKDA TALFNLS H EN +++
Sbjct: 667 SGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLMDPAAGMVD 726
Query: 576 XXXXXXXXXRQPIGAKAVVTEDEAVVGLIGMMRCGTPRGKENAVAALLELCRGGG 630
+ + ++ + L+ ++ G+ RGKENA AALL+L G
Sbjct: 727 KAVAVLANLATIPEGRNAIGQEGGIPLLVEVVELGSARGKENAAAALLQLSTNSG 781
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 60/93 (64%)
Query: 275 KRRLITQEIAETFLTVPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKT 334
+R L+ ++ + + + DF CP+SL++M DPVI+S+GQTYE++ I RW++ G CPKT
Sbjct: 218 ERLLLIKQTQTSSVAILADFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKT 277
Query: 335 GQMLGHNRLVPNRALRNLIVQWCSAHGVPLDPP 367
Q L H L+PN ++ LI WC + V L P
Sbjct: 278 RQTLTHTTLIPNYTVKALIANWCETNDVKLPDP 310
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Query: 399 LANGSQFGKTIAAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQENSVTALLN 458
L NG+ GK AA + F +EN+A I ++GA+ YL +L+ + + +V L N
Sbjct: 677 LGNGTPRGKKDAATAL-FNLSIHQENKAMIVQSGAVRYLIDLMDPAAGMV-DKAVAVLAN 734
Query: 459 LSIFDKNKSRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGA 518
L+ + ++ I +EG + +V+V+ G + +ENAAA L LS + + GA
Sbjct: 735 LATIPEGRNAI-GQEGGIPLLVEVVELG-SARGKENAAAALLQLSTNSGRFCNMVLQEGA 792
Query: 519 VEALAGLLQDGTPRGKKDA 537
V L L Q GTPR ++ A
Sbjct: 793 VPPLVALSQSGTPRAREKA 811
>AT5G67340.1 | Symbols: | ARM repeat superfamily protein |
chr5:26864996-26867450 FORWARD LENGTH=707
Length = 707
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 123/231 (53%), Gaps = 2/231 (0%)
Query: 396 IQQLANGSQFGKTIAAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQENSVTA 455
I L + S + A IR LA+ +NR IA AIP L +LL S + Q ++VT
Sbjct: 427 IDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDERIQADAVTC 486
Query: 456 LLNLSIFDKNKSRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADR 515
LLNLSI D NKS ++ E G + ++ VL+ G+ EA+ N+AATLFSLS + +YK I +
Sbjct: 487 LLNLSINDNNKS-LIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGE- 544
Query: 516 TGAVEALAGLLQDGTPRGKKDAVTALFNLSTHTENCVRMIEXXXXXXXXXXXXXXXXXXX 575
GA+E L LL G+ GKKDA TALFNLS H EN ++IE
Sbjct: 545 AGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELMDPAFGMVE 604
Query: 576 XXXXXXXXXRQPIGAKAVVTEDEAVVGLIGMMRCGTPRGKENAVAALLELC 626
K + E+ + L+ ++ G+ RGKENA AALL+LC
Sbjct: 605 KAVVVLANLATVREGKIAIGEEGGIPVLVEVVELGSARGKENATAALLQLC 655
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 122/274 (44%), Gaps = 30/274 (10%)
Query: 290 VPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRAL 349
VP DF C +SL+LM DPVI+++GQT+ER I +W++ G CPKT Q L H L PN +
Sbjct: 240 VPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNFIV 299
Query: 350 RNLIVQWCSAHGV-PLDPPEVLE-AEAFASACPXXXXXXXXXXXXXXXIQQLANGSQFGK 407
R + WC + V P DP E++ +E F ++ ++ + +
Sbjct: 300 RAFLASWCETNNVYPPDPLELIHSSEPFP--------------LLVESVRASSSENGHSE 345
Query: 408 TIAAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQENSV-----------TAL 456
++ A E+R + ++E N ++ ++ + N+ +
Sbjct: 346 SLDAEELRQVFSRSASAPGIVSEVVCKTKRNNNAAADRSLTRSNTPWKFPEERHWRHPGI 405
Query: 457 LNLSIFDKNKSRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRT 516
+ ++ + S ++ E + ++D L+ RE A D + VIA R
Sbjct: 406 IPATVRETGSSSSIETE--VKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIA-RC 462
Query: 517 GAVEALAGLLQDGTPRGKKDAVTALFNLSTHTEN 550
A+ +L LL R + DAVT L NLS + N
Sbjct: 463 EAIPSLVSLLYSTDERIQADAVTCLLNLSINDNN 496
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 73/128 (57%), Gaps = 8/128 (6%)
Query: 423 ENRAFIAEAGAIPYLRNLLSSHNAVAQENSVTALLNLSIFDKNKSRIMDEEGCLGSIVDV 482
E + I EAGAI L +LL S + ++++ TAL NLSI +NK++++ E G + +V++
Sbjct: 537 EYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVI-EAGAVRYLVEL 595
Query: 483 LR--FGHTTEARENAAATLFSLSAVHDYKKVIADRTGAVEALAGLLQDGTPRGKKDAVTA 540
+ FG E A L +L+ V + K I + G + L +++ G+ RGK++A A
Sbjct: 596 MDPAFGMV----EKAVVVLANLATVREGKIAIGEE-GGIPVLVEVVELGSARGKENATAA 650
Query: 541 LFNLSTHT 548
L L TH+
Sbjct: 651 LLQLCTHS 658
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 74/158 (46%), Gaps = 10/158 (6%)
Query: 399 LANGSQFGKTIAAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQENSVTALLN 458
L +GS GK AA + F EN+ + EAGA+ YL L+ + E +V L N
Sbjct: 555 LGSGSLSGKKDAATAL-FNLSIHHENKTKVIEAGAVRYLVELMDPAFGMV-EKAVVVLAN 612
Query: 459 LSIFDKNKSRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYK---KVIADR 515
L+ + K I EEG + +V+V+ G + +ENA A L L H K VI R
Sbjct: 613 LATVREGKIAI-GEEGGIPVLVEVVELG-SARGKENATAALLQL-CTHSPKFCNNVI--R 667
Query: 516 TGAVEALAGLLQDGTPRGKKDAVTALFNLSTHTENCVR 553
G + L L + GT RGK+ A L H ++ R
Sbjct: 668 EGVIPPLVALTKSGTARGKEKAQNLLKYFKAHRQSNQR 705
>AT5G18320.1 | Symbols: | ARM repeat superfamily protein |
chr5:6064431-6066186 REVERSE LENGTH=458
Length = 458
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/272 (36%), Positives = 141/272 (51%), Gaps = 28/272 (10%)
Query: 290 VPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRAL 349
VPK+F C +S +M +PVII++GQTYE+ I+ W++ TCPKT Q+L H +PN +
Sbjct: 72 VPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKH-ERTCPKTKQVLSHRLWIPNHLI 130
Query: 350 RNLIVQWCSAHGVP-LDPPEVLEAEAFASACPXXXXXXXXXXXXXXXIQQLANGSQFGKT 408
+LI QWC + P + L AE F S +Q++++ S
Sbjct: 131 SDLITQWCLVNKYDHQKPSDELVAELFTSDIE-------------ALLQRVSSSSSVADQ 177
Query: 409 I-AAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAV---------AQENSVTALLN 458
I AA+E+R K R F AG + LLS + + QEN VTAL N
Sbjct: 178 IEAAKELRHQTKKFPNVRVFFV-AGIHDSITRLLSPLSTLDEAVDSSLELQENIVTALFN 236
Query: 459 LSIFDKNKSRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGA 518
LSI + NK+ I + + + L+ G T E R NAAATL SLSA+ D K+I + A
Sbjct: 237 LSILESNKTVIAENCLVIPLLTKSLKQG-TDETRRNAAATLSSLSAI-DSNKIIIGNSEA 294
Query: 519 VEALAGLLQDGTPRGKKDAVTALFNLSTHTEN 550
V+AL L+++G K+A + +FNL EN
Sbjct: 295 VKALIDLIEEGDLLATKEATSTVFNLCIVLEN 326
>AT3G54790.2 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284255 REVERSE LENGTH=724
Length = 724
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 121/231 (52%), Gaps = 2/231 (0%)
Query: 396 IQQLANGSQFGKTIAAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQENSVTA 455
++ L +GS KT AA EIR L ENR I GAI L +LL S + QE++VTA
Sbjct: 442 VEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAVTA 501
Query: 456 LLNLSIFDKNKSRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADR 515
LLNLSI + NK+ I+ E G + +V VL G+ A+EN+AA+LFSLS + ++ I
Sbjct: 502 LLNLSISELNKAMIV-EVGAIEPLVHVLNTGN-DRAKENSAASLFSLSVLQVNRERIGQS 559
Query: 516 TGAVEALAGLLQDGTPRGKKDAVTALFNLSTHTENCVRMIEXXXXXXXXXXXXXXXXXXX 575
A++AL LL GT RGKKDA +ALFNLS +N R+++
Sbjct: 560 NAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELLDPDLEMVD 619
Query: 576 XXXXXXXXXRQPIGAKAVVTEDEAVVGLIGMMRCGTPRGKENAVAALLELC 626
+ + + + L+ + G+ RGKENA + LL+LC
Sbjct: 620 KAVALLANLSAVGEGRQAIVREGGIPLLVETVDLGSQRGKENAASVLLQLC 670
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 54/77 (70%)
Query: 288 LTVPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNR 347
+++P F CP+S +LM DPVI+++GQT++R+SI +W++ G CP+T Q+L H L+PN
Sbjct: 200 ISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNY 259
Query: 348 ALRNLIVQWCSAHGVPL 364
++ +I W A+ + L
Sbjct: 260 TVKAMIASWLEANRINL 276
>AT3G54790.1 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284363 REVERSE LENGTH=760
Length = 760
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 121/231 (52%), Gaps = 2/231 (0%)
Query: 396 IQQLANGSQFGKTIAAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQENSVTA 455
++ L +GS KT AA EIR L ENR I GAI L +LL S + QE++VTA
Sbjct: 478 VEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAVTA 537
Query: 456 LLNLSIFDKNKSRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADR 515
LLNLSI + NK+ I+ E G + +V VL G+ A+EN+AA+LFSLS + ++ I
Sbjct: 538 LLNLSISELNKAMIV-EVGAIEPLVHVLNTGN-DRAKENSAASLFSLSVLQVNRERIGQS 595
Query: 516 TGAVEALAGLLQDGTPRGKKDAVTALFNLSTHTENCVRMIEXXXXXXXXXXXXXXXXXXX 575
A++AL LL GT RGKKDA +ALFNLS +N R+++
Sbjct: 596 NAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELLDPDLEMVD 655
Query: 576 XXXXXXXXXRQPIGAKAVVTEDEAVVGLIGMMRCGTPRGKENAVAALLELC 626
+ + + + L+ + G+ RGKENA + LL+LC
Sbjct: 656 KAVALLANLSAVGEGRQAIVREGGIPLLVETVDLGSQRGKENAASVLLQLC 706
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 54/77 (70%)
Query: 288 LTVPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNR 347
+++P F CP+S +LM DPVI+++GQT++R+SI +W++ G CP+T Q+L H L+PN
Sbjct: 236 ISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNY 295
Query: 348 ALRNLIVQWCSAHGVPL 364
++ +I W A+ + L
Sbjct: 296 TVKAMIASWLEANRINL 312
>AT3G01400.1 | Symbols: | ARM repeat superfamily protein |
chr3:151920-152987 FORWARD LENGTH=355
Length = 355
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 114/218 (52%), Gaps = 4/218 (1%)
Query: 410 AAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQENSVTALLNLSIFDKNKSRI 469
AA EIR L+K ENR IA+AGAI L +L+SS + QE VTA+LNLS+ D+NK I
Sbjct: 83 AAMEIRLLSKNKPENRIKIAKAGAIKPLISLISSSDLQLQEYGVTAILNLSLCDENKESI 142
Query: 470 MDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGAVEALAGLLQDG 529
G + +V L+ G T A+ENAA L LS + + K I R+GA+ L LL+ G
Sbjct: 143 AS-SGAIKPLVRALKMGTPT-AKENAACALLRLSQIEENKVAIG-RSGAIPLLVNLLETG 199
Query: 530 TPRGKKDAVTALFNLSTHTENCVRMIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQPI- 588
R KKDA TAL++L + EN +R ++ +
Sbjct: 200 GFRAKKDASTALYSLCSAKENKIRAVQSGIMKPLVELMADFGSNMVDKSAFVMSLLMSVP 259
Query: 589 GAKAVVTEDEAVVGLIGMMRCGTPRGKENAVAALLELC 626
+K + E+ V L+ ++ GT R KE AV+ LL+LC
Sbjct: 260 ESKPAIVEEGGVPVLVEIVEVGTQRQKEMAVSILLQLC 297
>AT5G58680.1 | Symbols: | ARM repeat superfamily protein |
chr5:23708247-23709320 REVERSE LENGTH=357
Length = 357
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 114/218 (52%), Gaps = 4/218 (1%)
Query: 410 AAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQENSVTALLNLSIFDKNKSRI 469
AA EIR L+K ENR +A+AGAI L +L+SS + QE VTA+LNLS+ D+NK I
Sbjct: 81 AAMEIRLLSKNKPENRIKLAKAGAIKPLVSLISSSDLQLQEYGVTAVLNLSLCDENKEMI 140
Query: 470 MDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGAVEALAGLLQDG 529
+ G + +V+ LR G T +ENAA L LS V + K I R+GA+ L LL++G
Sbjct: 141 VS-SGAVKPLVNALRLGTPT-TKENAACALLRLSQVEENKITIG-RSGAIPLLVNLLENG 197
Query: 530 TPRGKKDAVTALFNLSTHTENCVRMIEXXXXXXXXXXXXX-XXXXXXXXXXXXXXXRQPI 588
R KKDA TAL++L + EN R +E
Sbjct: 198 GFRAKKDASTALYSLCSTNENKTRAVESGIMKPLVELMIDFESDMVDKSAFVMNLLMSAP 257
Query: 589 GAKAVVTEDEAVVGLIGMMRCGTPRGKENAVAALLELC 626
+K V E+ V L+ ++ GT R KE +V+ LL+LC
Sbjct: 258 ESKPAVVEEGGVPVLVEIVEAGTQRQKEISVSILLQLC 295
>AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 |
chr4:11356143-11357267 REVERSE LENGTH=374
Length = 374
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 138/270 (51%), Gaps = 19/270 (7%)
Query: 290 VPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHN-RLVPNRA 348
+P DF CPISL++M DPVI+ +G T++R SI +W++ G+ TCP T L L+PN A
Sbjct: 5 LPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHA 64
Query: 349 LRNLIVQWCSAHGVPLDPPEVLEAEAFASACPXXXXXXXXXXXXXXXIQQLANGSQFGKT 408
LR+LI+ + P + + + + I L + S +
Sbjct: 65 LRSLILNFAHVSLKESSRPRTQQEHSHSQS--------------QALISTLVSQSSSNAS 110
Query: 409 IAAREIRFLAKTGREN--RAFIAEAGAIPYLRNLLSSHNAVAQENSVTALLNLSIFDKNK 466
R + T R++ R + E+GA+ + + S N V QE S++ LLNLS+ D NK
Sbjct: 111 KLESLTRLVRLTKRDSSIRRKVTESGAVRAALDCVDSCNQVLQEKSLSLLLNLSLEDDNK 170
Query: 467 SRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGAVEALAGLL 526
++ +G + IV VLR G + + + AA L SL+ V K I A+ AL LL
Sbjct: 171 VGLV-ADGVIRRIVTVLRVG-SPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLL 228
Query: 527 QDGTPRGKKDAVTALFNLSTHTENCVRMIE 556
+ G R +K++ TAL+ L + +N R+++
Sbjct: 229 RVGNDRERKESATALYALCSFPDNRKRVVD 258
>AT1G67530.2 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 126/275 (45%), Gaps = 21/275 (7%)
Query: 291 PKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRALR 350
P++ CPISL LM DPVII++GQTYER I +W +GH TCPKT Q L H L PN ++
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCVK 332
Query: 351 NLIVQWCSAHG--VPLDPPEVLEAEAFASACPXXXXXXXXXXXXXXXIQ----QLANGSQ 404
LI WC +G +P PPE + + + A + ++ +
Sbjct: 333 GLIASWCEQNGTQIPSGPPESQDLDYWRLALSDSESTKSQSVNSIGSYKLKGVKIVPLEE 392
Query: 405 FGKTIAAR---EIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQENSVTALLNLSI 461
G T+ R E F++ E + I L +L+ + ++ V + L +
Sbjct: 393 NGTTVVERQNTEESFVSDDDDEEDSDINVLERYQDLLAVLNEEEGLEKKCKVVEKIRLLL 452
Query: 462 FDKNKSRIMDEEGCLGSIVDVLRF------GHTTEARENAAATLFSLSAVHDYKKVIADR 515
D ++RI G G + +LRF + A+++ A LF+L+ ++ K +
Sbjct: 453 KDDEEARIF--MGANGFVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVNNNRNKELMLT 510
Query: 516 TGAVEALAGLLQDGTPRGKKDAVTALF-NLSTHTE 549
+G + L ++ G + TAL+ NLS E
Sbjct: 511 SGVIRLLEKMISSAESHG---SATALYLNLSCLDE 542
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 407 KTIAAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSS----HNAVAQENSVTALLNLSIF 462
K +IR L K E R F+ G + L L S +NA AQ++ AL NL++
Sbjct: 441 KCKVVEKIRLLLKDDEEARIFMGANGFVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVN 500
Query: 463 DKNKSRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGAVEAL 522
+ +M G + + ++ + E+ +A A +LS + + K VI + AV L
Sbjct: 501 NNRNKELMLTSGVIRLLEKMI---SSAESHGSATALYLNLSCLDEAKSVIGS-SQAVPFL 556
Query: 523 AGLLQ-DGTPRGKKDAVTALFNLSTHTEN 550
LLQ + + K DA+ AL+NLST++ N
Sbjct: 557 VQLLQKEIETQCKLDALHALYNLSTYSPN 585
>AT1G67530.1 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 126/275 (45%), Gaps = 21/275 (7%)
Query: 291 PKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRALR 350
P++ CPISL LM DPVII++GQTYER I +W +GH TCPKT Q L H L PN ++
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCVK 332
Query: 351 NLIVQWCSAHG--VPLDPPEVLEAEAFASACPXXXXXXXXXXXXXXXIQ----QLANGSQ 404
LI WC +G +P PPE + + + A + ++ +
Sbjct: 333 GLIASWCEQNGTQIPSGPPESQDLDYWRLALSDSESTKSQSVNSIGSYKLKGVKIVPLEE 392
Query: 405 FGKTIAAR---EIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQENSVTALLNLSI 461
G T+ R E F++ E + I L +L+ + ++ V + L +
Sbjct: 393 NGTTVVERQNTEESFVSDDDDEEDSDINVLERYQDLLAVLNEEEGLEKKCKVVEKIRLLL 452
Query: 462 FDKNKSRIMDEEGCLGSIVDVLRF------GHTTEARENAAATLFSLSAVHDYKKVIADR 515
D ++RI G G + +LRF + A+++ A LF+L+ ++ K +
Sbjct: 453 KDDEEARIF--MGANGFVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVNNNRNKELMLT 510
Query: 516 TGAVEALAGLLQDGTPRGKKDAVTALF-NLSTHTE 549
+G + L ++ G + TAL+ NLS E
Sbjct: 511 SGVIRLLEKMISSAESHG---SATALYLNLSCLDE 542
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 407 KTIAAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSS----HNAVAQENSVTALLNLSIF 462
K +IR L K E R F+ G + L L S +NA AQ++ AL NL++
Sbjct: 441 KCKVVEKIRLLLKDDEEARIFMGANGFVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVN 500
Query: 463 DKNKSRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGAVEAL 522
+ +M G + + ++ + E+ +A A +LS + + K VI + AV L
Sbjct: 501 NNRNKELMLTSGVIRLLEKMI---SSAESHGSATALYLNLSCLDEAKSVIGS-SQAVPFL 556
Query: 523 AGLLQ-DGTPRGKKDAVTALFNLSTHTEN 550
LLQ + + K DA+ AL+NLST++ N
Sbjct: 557 VQLLQKEIETQCKLDALHALYNLSTYSPN 585
>AT1G24330.1 | Symbols: | ARM repeat superfamily protein |
chr1:8631779-8634835 FORWARD LENGTH=771
Length = 771
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Query: 291 PKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRALR 350
P++ CPISL LM DPVII++GQTYER I +W +GH +CPKT Q L H L PN ++
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVK 335
Query: 351 NLIVQWCSAHG--VPLDPPEVLE 371
LI WC +G VP PPE L+
Sbjct: 336 GLIASWCEQNGITVPTGPPESLD 358
>AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 |
chr1:9720962-9723975 REVERSE LENGTH=768
Length = 768
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Query: 291 PKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRALR 350
P++ CPISL LM DPVII++GQTYER I +W +GH TCPKT Q L H L PN ++
Sbjct: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCVK 339
Query: 351 NLIVQWCSAHG--VPLDPPEVLE 371
LI WC +G VP PPE L+
Sbjct: 340 ALISSWCEQNGVQVPDGPPESLD 362
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 93/227 (40%), Gaps = 11/227 (4%)
Query: 407 KTIAAREIRFLAKTGRENRAFIAEAGAIP----YLRNLLSSHNAVAQENSVTALLNLSIF 462
K +IR L K E R + E G + +L + L+ +NA AQ+ AL NL++
Sbjct: 439 KCRVVEQIRVLLKDDEEARILMGENGCVEALLQFLGSALNENNASAQKVGAMALFNLAVD 498
Query: 463 DKNKSRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGAVEAL 522
+ +M G + + ++L H+ + A +LS + + K VI + AV +
Sbjct: 499 NNRNKELMLASGIIPLLEEMLCNPHS---HGSVTAIYLNLSCLEEAKPVIGS-SLAVPFM 554
Query: 523 AGLLQDGTP-RGKKDAVTALFNLSTHTEN--CVRMIEXXXXXXXXXXXXXXXXXXXXXXX 579
LL T + K DA+ +LF+LST+ N C+ +
Sbjct: 555 VNLLWTETEVQCKVDALHSLFHLSTYPPNIPCLLSADLVNALQSLTISDEQRWTEKSLAV 614
Query: 580 XXXXXRQPIGAKAVVTEDEAVVGLIGMMRCGTPRGKENAVAALLELC 626
G +V+ V L ++ G P +E AV+ LL LC
Sbjct: 615 LLNLVLNEAGKDEMVSAPSLVSNLCTILDTGEPNEQEQAVSLLLILC 661
>AT1G49780.1 | Symbols: PUB26 | plant U-box 26 |
chr1:18429024-18430289 REVERSE LENGTH=421
Length = 421
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 123/278 (44%), Gaps = 39/278 (14%)
Query: 288 LTVPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNR 347
+ +P F CPISLDLM DPV ISTGQTY+R+SI W+ G+TTCP T L L+PN
Sbjct: 12 IQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIPNH 71
Query: 348 ALRNLIVQWCSA---HGV--------PLDPPEVLEAEAFASACPXXXXXXXXXXXXXXXI 396
LR LI +WC A +GV P DP V + ASA
Sbjct: 72 TLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITG--------------- 116
Query: 397 QQLANGSQFGKTIAAREIRFLAKTGRENRAFIAEAGAIPYLRNLL-----SSHNAVAQEN 451
+ S + A R +R LA+ +NR IA A L +L ++ + +
Sbjct: 117 ---THVSVRSRAAAIRRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVS 173
Query: 452 SVTALLNLSIFDKNKSRIMDEEGCLGSIVDVLRFGHTTEARENAAATL---FSLSAVHDY 508
ALL L + + + + + L F + E R NAAA + + + D
Sbjct: 174 ESLALLVLLHMTETECEAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDL 233
Query: 509 KKVIADRTGAVEALAGLLQD--GTPRGKKDAVTALFNL 544
K +I+ E + LL++ + R K + A+F L
Sbjct: 234 KLIISGSDSIFEGVLDLLKNPISSRRALKIGIKAIFAL 271
>AT3G19380.1 | Symbols: PUB25 | plant U-box 25 |
chr3:6714602-6715867 REVERSE LENGTH=421
Length = 421
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 123/276 (44%), Gaps = 37/276 (13%)
Query: 288 LTVPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEG-HTTCPKTGQMLGHNRLVPN 346
+ +P F CPISL+LM+DPV + TGQTY+R+SI W+ G +TTCP T L L+PN
Sbjct: 12 IQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPN 71
Query: 347 RALRNLIVQWCSA---HGV--------PLDPPEVLEAEAFASACPXXXXXXXXXXXXXXX 395
LR LI +WC A +GV P DP V + ASA
Sbjct: 72 HTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITG-------------- 117
Query: 396 IQQLANGSQFGKTIAAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQ--ENSV 453
+ S + A R +R A+ +NR IA A L +L S ++ S+
Sbjct: 118 ----THVSVRSRAAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESL 173
Query: 454 TALLNLSIFDKNKSRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSA---VHDYKK 510
L+ L I + N+ + + + L F + E R NAAA + +S D K
Sbjct: 174 ALLVMLPITEPNQFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKG 233
Query: 511 VIADRTGAVEALAGLLQD--GTPRGKKDAVTALFNL 544
I++ E + LL++ + R K + LF L
Sbjct: 234 SISNSESVFEGVLDLLRNPISSRRALKIGIKTLFAL 269
>AT4G16490.1 | Symbols: | ARM repeat superfamily protein |
chr4:9293891-9295530 REVERSE LENGTH=472
Length = 472
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 124/248 (50%), Gaps = 10/248 (4%)
Query: 407 KTIAAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQENSVTALLNLSIFDKNK 466
K AA ++R LAK +NR I E+GAI L LL ++ QE++VTALLNLS+ D+NK
Sbjct: 200 KRSAAAKLRLLAKNRADNRVLIGESGAIQALIPLLRCNDPWTQEHAVTALLNLSLHDQNK 259
Query: 467 SRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGAVEALAGLL 526
+ ++ G + S+V VL+ G T +++NAA L SL+ + + K I GA+ L LL
Sbjct: 260 A-VIAAGGAIKSLVWVLKTGTET-SKQNAACALLSLALLEENKGSIG-ACGAIPPLVSLL 316
Query: 527 QDGTPRGKKDAVTALFNLSTHTENCVRMIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQ 586
+G+ RGKKDA+T L+ L T +N R +
Sbjct: 317 LNGSCRGKKDALTTLYKLCTLQQNKERAVTAGAVKPLVDLVAEEGTGMAEKAMVVLSSLA 376
Query: 587 PI-GAKAVVTEDEAVVGLIGMMRCGTPRGKENAVAALLELC----RGGGAAATERVVKAP 641
I K + E+ + L+ + G+ +GKE A+ LL+LC R G E + P
Sbjct: 377 AIDDGKEAIVEEGGIAALVEAIEDGSVKGKEFAILTLLQLCSDSVRNRGLLVREGAI--P 434
Query: 642 ALAGLLQT 649
L GL Q+
Sbjct: 435 PLVGLSQS 442
>AT5G37490.1 | Symbols: | ARM repeat superfamily protein |
chr5:14887744-14889051 FORWARD LENGTH=435
Length = 435
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 53/80 (66%)
Query: 285 ETFLTVPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLV 344
E+ +T+P +F CPIS+DLM+DPVIISTG TY+R SI W+ G+ TCP T +L +
Sbjct: 26 ESEITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQI 85
Query: 345 PNRALRNLIVQWCSAHGVPL 364
PN +R +I WC G PL
Sbjct: 86 PNHTIRKMIQGWCVEKGSPL 105
>AT5G18340.1 | Symbols: | ARM repeat superfamily protein |
chr5:6070640-6072198 REVERSE LENGTH=456
Length = 456
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 134/287 (46%), Gaps = 33/287 (11%)
Query: 273 KSKRRLITQEIAETFLTVPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCP 332
+SK+R +E + + VPK+F C +S +M DPVII +GQTYE+ I+ W+ TCP
Sbjct: 59 ESKKR--KRESDSSSVEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLNHD-LTCP 115
Query: 333 KTGQMLGHNRLVPNRALRNLIVQWCSAHGV--PLDPPEVLE--AEAFASACPXXXXXXXX 388
Q+L L PN + LI +WC A+ P P ++ E F
Sbjct: 116 TAKQVLYRVCLTPNHLINELITRWCLANKYDRPAPKPSDIDYVTELFTDGIE-------- 167
Query: 389 XXXXXXXIQQLA--NGSQFGKTIAAREIRFLAKTGRENRAFIAEA--GAIPYLRNLLS-- 442
+Q+++ + S +T AA+E+ + R F + +I L LS
Sbjct: 168 -----SLLQRISSPSSSVADQTEAAKELALQTEKFVNVRDFFIKELPDSITRLLTPLSVL 222
Query: 443 ----SHNAVAQENSVTALLNLSIFDKNKSRIMDEEGCLGSIVDVLRFGHTTEARENAAAT 498
N QEN VTAL N+S F+KNK+ + + + + ++ G R NA T
Sbjct: 223 GDEVDSNPELQENIVTALFNMSTFEKNKTVLAENHQVIPLLAKSMKQGSVV-TRRNATLT 281
Query: 499 LFSLSAVHDYKKVIADRTGAVEALAGLLQD-GTPRGKKDAVTALFNL 544
L SLS + D K+I + A++AL L+ + DA+ A+ +L
Sbjct: 282 LASLSDI-DSNKIIIGNSVALKALIDLIGELDDLSATHDALCAVIDL 327
>AT5G18330.1 | Symbols: | ARM repeat superfamily protein |
chr5:6068474-6070042 REVERSE LENGTH=445
Length = 445
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 130/265 (49%), Gaps = 30/265 (11%)
Query: 290 VPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRAL 349
VPK+F C +S +M +P++I++GQT+E+S I W++ TCP+T Q+L H ++PN +
Sbjct: 65 VPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLKHER-TCPRTKQVLYHRFMIPNHLI 123
Query: 350 RNLIVQWCSAHGV--PLDPPEVLEAEAFASACPXXXXXXXXXXXXXXXIQQLANGSQF-G 406
+I +WC H P EV++ +Q++++ S
Sbjct: 124 NEVIKEWCLIHNFDRPKTSDEVID---------------LFTGDLESLLQRISSPSSVED 168
Query: 407 KTIAAREIRFLAKTGRENRAFIAEAGAIP-YLRNLLS------SHNAVAQENSVTALLNL 459
+T AA+E+ AK R + + IP + LL+ N EN VTAL
Sbjct: 169 QTEAAKELALKAK--RFSSVCVYFVAKIPDSITRLLTPLSISEDSNPEFLENIVTALHIF 226
Query: 460 SIFDKNKSRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGAV 519
S +KNK+ + + L + ++ G T R ++AAT+ SLS D K+I + +
Sbjct: 227 STSEKNKTLVAENPLVLPLLAKYMKQG-TVLTRIHSAATVNSLSYT-DSNKIIIGNSEVL 284
Query: 520 EALAGLLQDGTPRGKKDAVTALFNL 544
+AL ++++G +A +AL NL
Sbjct: 285 KALIHVIEEGDSLATSEAFSALSNL 309
>AT3G18710.1 | Symbols: PUB29, ATPUB29 | plant U-box 29 |
chr3:6434234-6435481 REVERSE LENGTH=415
Length = 415
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 52/78 (66%)
Query: 284 AETFLTVPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRL 343
ET++TVP F CPISLD+MR PV + TG TY+R+SI RW++ G+ TCP T Q+L
Sbjct: 6 TETYITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDF 65
Query: 344 VPNRALRNLIVQWCSAHG 361
VPN L+ LI W + G
Sbjct: 66 VPNLTLQRLINIWSDSIG 83
>AT5G65920.1 | Symbols: | ARM repeat superfamily protein |
chr5:26364323-26365657 REVERSE LENGTH=444
Length = 444
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 131/281 (46%), Gaps = 27/281 (9%)
Query: 275 KRRLITQE-IAETFL-TVPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCP 332
K++L +E I+E L +P F CPISL+ M+DPV + TGQTYERS+I +W GH TCP
Sbjct: 43 KKKLDLKEMISELELPEIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCP 102
Query: 333 KTGQMLGHNRLVPNRALRNLIVQWCSAHGVPLDP-PEVLEAEAFASACPXXXXXXXXXXX 391
T Q L + + PN+ L LI W S V + E ++ A
Sbjct: 103 TTMQELWDDLVTPNKTLHQLIYTWFSQKYVLMKKRSEDVQGRAIE--------------- 147
Query: 392 XXXXIQQLANGSQFGKTIAAREIRFLAKTGRENRAFIAEAGAIPYLRNLLS--SHNAVAQ 449
+ L K A E++ + + + + G + + +LLS + +AV
Sbjct: 148 ---ILGTLRKAKGKAKVHALSELKQVVMAHAIAKKTVVDEGGVFVISSLLSPFTSHAVGS 204
Query: 450 ENSVTALLNLSIFDKNKSRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYK 509
E ++ L+NL + +K+ +M + + +VD+L G + E + N A + L ++
Sbjct: 205 E-AIAILVNLELDSDSKAGLM-QPARVSLMVDMLNDG-SIETKINCARLIGRLVEEKGFR 261
Query: 510 KVIADRTGAVEALAGLLQDGTPR-GKKDAVTALFNLSTHTE 549
+ + L L++D R G A+T L ++S H +
Sbjct: 262 AELVSSHSLLVGLMRLVKDRRRRNGVSPALTLLKSVSVHKQ 302
>AT3G49810.1 | Symbols: | ARM repeat superfamily protein |
chr3:18474936-18476282 REVERSE LENGTH=448
Length = 448
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 116/263 (44%), Gaps = 23/263 (8%)
Query: 290 VPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRAL 349
+P F CPISL+ M+DPV + TGQTYER +I +W GH TCP T Q L + + PN+ L
Sbjct: 64 IPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTPNKTL 123
Query: 350 RNLIVQWCSAHGVPLDP-PEVLEAEAFASACPXXXXXXXXXXXXXXXIQQLANGSQFGKT 408
+LI W S V + E ++ A + L +
Sbjct: 124 HHLIYTWFSQKYVLMKKRSEDVQGRAIE------------------ILGTLKKAKGQARV 165
Query: 409 IAAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQENSVTALL-NLSIFDKNKS 467
A E++ + R + E G + + +LL + A + V A+L +L + +KS
Sbjct: 166 HALSELKQIVIAHLMARKTVVEEGGVSVISSLLGPFTSHAVGSEVVAILVSLDLDSDSKS 225
Query: 468 RIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGAVEALAGLLQ 527
+M + + IVD+L G + E + N A + L ++ + + L L++
Sbjct: 226 GLM-QPAKVSLIVDMLNDG-SNETKINCARLIRGLVEEKGFRAELVSSHSLLVGLMRLVK 283
Query: 528 DGTPR-GKKDAVTALFNLSTHTE 549
D R G A+ L +S H +
Sbjct: 284 DKRHRNGVSPALRLLKPISVHKQ 306
>AT3G52450.1 | Symbols: PUB22 | plant U-box 22 |
chr3:19440943-19442250 REVERSE LENGTH=435
Length = 435
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 288 LTVPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEG-HTTCPKTGQMLGHNRLVPN 346
+ +P F CPISLD+M+DPVI+STG TY+R SI +W+ G +CP T Q++ L PN
Sbjct: 5 IEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTPN 64
Query: 347 RALRNLIVQWCSAHG------VPLDPPEVLEAE 373
LR LI WC+ + +P P + ++E
Sbjct: 65 HTLRRLIQSWCTLNASYGIERIPTPKPPICKSE 97
>AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | CYS, MET, PRO, and GLY
protein 2 | chr5:25842119-25843381 REVERSE LENGTH=420
Length = 420
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 49/69 (71%)
Query: 288 LTVPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNR 347
+TVP F CPISLD+M+ PV + TG TY+R+SI RW++ G+ TCP T Q+L + +PNR
Sbjct: 8 ITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNR 67
Query: 348 ALRNLIVQW 356
L+ LI W
Sbjct: 68 TLQRLIEIW 76
>AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY
protein 1 | chr1:24637218-24638513 FORWARD LENGTH=431
Length = 431
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%)
Query: 285 ETFLTVPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLV 344
E +T+P F CPIS +LM+DPVII++G TY+R +I +W E G+ TCP T +L +
Sbjct: 28 EVEITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQI 87
Query: 345 PNRALRNLIVQWCSA 359
PN +R +I WC +
Sbjct: 88 PNHTIRRMIQGWCGS 102
>AT5G09800.1 | Symbols: | ARM repeat superfamily protein |
chr5:3043123-3044352 REVERSE LENGTH=409
Length = 409
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 47/68 (69%)
Query: 289 TVPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRA 348
TVP F CPISLD+M+ PV +STG TY+R SI RW+++G+ TCP T Q+L + VPN
Sbjct: 10 TVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLT 69
Query: 349 LRNLIVQW 356
L LI W
Sbjct: 70 LHRLIDHW 77
>AT2G35930.1 | Symbols: PUB23 | plant U-box 23 |
chr2:15083101-15084336 REVERSE LENGTH=411
Length = 411
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 59/98 (60%), Gaps = 7/98 (7%)
Query: 283 IAETFLTVPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEG-HTTCPKTGQMLGHN 341
I + + +P F CPISL++M+DPVI+STG TY+R SI +W+ G +CP T Q +
Sbjct: 5 IMDEEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDA 64
Query: 342 RLVPNRALRNLIVQWCS---AHGV---PLDPPEVLEAE 373
L PN LR LI WC+ ++GV P P + ++E
Sbjct: 65 DLTPNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSE 102
>AT2G45920.1 | Symbols: | U-box domain-containing protein |
chr2:18899363-18901097 FORWARD LENGTH=400
Length = 400
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 46/69 (66%)
Query: 291 PKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRALR 350
P+ F CPISL++M+DP + + G TYE +IS W++ GH T P T L H +LVPN ALR
Sbjct: 326 PQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKLHHTKLVPNLALR 385
Query: 351 NLIVQWCSA 359
+ I +W A
Sbjct: 386 SAIQEWLHA 394
>AT3G07360.3 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
chr3:2355636-2356613 FORWARD LENGTH=325
Length = 325
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 83/151 (54%), Gaps = 7/151 (4%)
Query: 410 AAREIRFLAKTGRENRAFIAEA-GAIPYLRNLL---SSHNAVAQENSVTALLNLSIFD-K 464
AA+E+R L + G E RA E+ I L N L S+ + QE+ VT LLN+SI D
Sbjct: 54 AAKELRLLTRKGTEFRALFGESPDEITRLVNPLLHGSNPDEKLQEDVVTTLLNISIHDDS 113
Query: 465 NKSRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGAVEALAG 524
NK + + + ++D LR G T R NAAA +F+LSA+ D KV+ ++G ++ L
Sbjct: 114 NKKLVCENPNVIPLLIDALRRG-TVATRSNAAAAIFTLSAL-DSNKVLIGKSGILKPLID 171
Query: 525 LLQDGTPRGKKDAVTALFNLSTHTENCVRMI 555
LL++G P KD A+F L EN R +
Sbjct: 172 LLEEGNPLAIKDVAAAIFTLCIAHENRSRAV 202
>AT3G07360.2 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
chr3:2355636-2356613 FORWARD LENGTH=325
Length = 325
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 83/151 (54%), Gaps = 7/151 (4%)
Query: 410 AAREIRFLAKTGRENRAFIAEA-GAIPYLRNLL---SSHNAVAQENSVTALLNLSIFD-K 464
AA+E+R L + G E RA E+ I L N L S+ + QE+ VT LLN+SI D
Sbjct: 54 AAKELRLLTRKGTEFRALFGESPDEITRLVNPLLHGSNPDEKLQEDVVTTLLNISIHDDS 113
Query: 465 NKSRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGAVEALAG 524
NK + + + ++D LR G T R NAAA +F+LSA+ D KV+ ++G ++ L
Sbjct: 114 NKKLVCENPNVIPLLIDALRRG-TVATRSNAAAAIFTLSAL-DSNKVLIGKSGILKPLID 171
Query: 525 LLQDGTPRGKKDAVTALFNLSTHTENCVRMI 555
LL++G P KD A+F L EN R +
Sbjct: 172 LLEEGNPLAIKDVAAAIFTLCIAHENRSRAV 202
>AT1G01660.1 | Symbols: | RING/U-box superfamily protein |
chr1:240057-242608 REVERSE LENGTH=568
Length = 568
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 42/66 (63%)
Query: 291 PKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRALR 350
P F CPIS ++MR+P + + G TYE S+ W++ GH T P T L HN LVPN ALR
Sbjct: 498 PSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHALR 557
Query: 351 NLIVQW 356
+ I +W
Sbjct: 558 SAIQEW 563
>AT1G08315.1 | Symbols: | ARM repeat superfamily protein |
chr1:2620500-2621477 REVERSE LENGTH=325
Length = 325
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 8/166 (4%)
Query: 396 IQQLANGSQFGKTIAAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQENSVTA 455
+ +L++ S+ + A E+R ++K ++R IA+AGAIPYL L S + +QEN+
Sbjct: 13 VSRLSSVSEQTRAAALAELRLISKQDPDSRLIIADAGAIPYLAETLYSSSHSSQENAAAT 72
Query: 456 LLNLSIFDKNKSRIMDEEGCLGSIVDVLRFGHTTE---ARENAAATLFS-LSAVHDYKKV 511
LLNLSI + +M G L ++ LR TT A +++AAT++S L A Y+ +
Sbjct: 73 LLNLSITSREP--LMSSRGLLDALSHALRHHDTTTSPAAVQSSAATIYSLLIAEESYRPI 130
Query: 512 IADRTGAVEALAGLLQ--DGTPRGKKDAVTALFNLSTHTENCVRMI 555
I + + +L +++ D PR KD++ ALF ++ + N MI
Sbjct: 131 IGSKRDIIFSLIHIIRYPDSHPRSIKDSLKALFAIALYPMNRSTMI 176
>AT4G36550.1 | Symbols: | ARM repeat superfamily protein |
chr4:17245400-17247926 REVERSE LENGTH=718
Length = 718
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 289 TVPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRA 348
T+P+ F C +S +M DPVIIS+G T+ER I +W +EG+ +CP + + L L PN
Sbjct: 218 TLPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVE 277
Query: 349 LRNLIVQWCSAHGVPLDPP 367
L++ I +WC+ +G+ + P
Sbjct: 278 LKSQISEWCAKNGLDVQDP 296
>AT3G61390.2 | Symbols: | RING/U-box superfamily protein |
chr3:22716418-22718270 FORWARD LENGTH=435
Length = 435
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 42/66 (63%)
Query: 291 PKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRALR 350
P+ F CPI+ D+M DP + + G TYE +ISRW E GH T P + L H LVPN ALR
Sbjct: 354 PQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTSLVPNLALR 413
Query: 351 NLIVQW 356
+ I +W
Sbjct: 414 SAIQEW 419
>AT5G62560.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr5:25110073-25111752 FORWARD
LENGTH=559
Length = 559
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 9/220 (4%)
Query: 414 IRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQENSVTALLNLSIFDKNKSRIMDEE 473
+R + ++ + R + + +LR+LL S + Q N+ +++NLS+ +NK +I+
Sbjct: 258 LRKMTRSSEDLRVSLCTDRILSFLRSLLVSRYNLVQTNAAASVVNLSLEKQNKVKIV-RS 316
Query: 474 GCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGAVEALAGLLQDG-TPR 532
G + ++DVL+ G TTEA+E+ A LFSL A+ D K++ GAVE L L+ + R
Sbjct: 317 GFVPLLIDVLKSG-TTEAQEHVAGALFSL-ALEDENKMVIGVLGAVEPLLHALRSSESER 374
Query: 533 GKKDAVTALFNLSTHTENCVRMIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQPIGAKA 592
++DA AL++LS N R++ P G K
Sbjct: 375 ARQDAALALYHLSLIPSNRTRLVRAGAVPTLLSMVRSGDSTSRILLVLCNLAACPDG-KG 433
Query: 593 VVTEDEAVVGLIGMMR----CGTPRGKENAVAALLELCRG 628
+ + AV L+G +R + +EN VA LL LC+G
Sbjct: 434 AMLDGNAVAILVGKLREVGGGDSEAARENCVAVLLTLCQG 473
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 290 VPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRAL 349
P +F CPI+ LM DPV++S+GQT+ER S+ G+ G + ++PN A+
Sbjct: 31 TPPEFLCPITGFLMSDPVVVSSGQTFERLSVQVCRNLGYIPDLLDGTRPDLSTVIPNLAM 90
Query: 350 RNLIVQWCSAHGVPLD-PPEVLEAEAFASA 378
++ I WC V PP+ E A
Sbjct: 91 KSTIFSWCDRQKVDHPRPPDAAYVEGVVRA 120
>AT3G11840.1 | Symbols: PUB24 | plant U-box 24 |
chr3:3736578-3738250 REVERSE LENGTH=470
Length = 470
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 72/163 (44%), Gaps = 39/163 (23%)
Query: 285 ETFLTVPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLG-HNRL 343
E + +P F CPISL++M+DPV +G TY+R +I +W+E+ +CP T Q L + L
Sbjct: 19 EEEIEIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWLEKV-PSCPVTKQPLPLDSDL 77
Query: 344 VPNRALRNLIVQWC---SAHGV-----PLDPPEVLEAEAFASACPXXXXXXXXXXXXXXX 395
PN LR LI WC GV P PP L
Sbjct: 78 TPNHMLRRLIQHWCVENETRGVVRISTPRVPPGKLNV----------------------- 114
Query: 396 IQQLANGSQFGKTIAARE-----IRFLAKTGRENRAFIAEAGA 433
++++ N +FG+ RE + LA G NR + E G
Sbjct: 115 VEEIKNLKKFGQEALGREETLQKLEVLAMDGN-NRRLMCECGV 156
>AT1G56040.1 | Symbols: | HEAT/U-box domain-containing protein |
chr1:20960356-20962334 REVERSE LENGTH=485
Length = 485
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 39/63 (61%)
Query: 291 PKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRALR 350
P F CPI+ ++M+DP + G TYE SI +W+ GH T P T L H LVPNRALR
Sbjct: 419 PSSFFCPITQEVMKDPHFAADGFTYEAESIRKWLSTGHQTSPMTNLRLSHLTLVPNRALR 478
Query: 351 NLI 353
+ I
Sbjct: 479 SAI 481
>AT1G01680.1 | Symbols: ATPUB54, PUB54 | plant U-box 54 |
chr1:246411-248329 REVERSE LENGTH=308
Length = 308
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 270 SMKKSKRRLITQEIAETFLTVPK--DFCCPISLDLMRDPVIISTGQTYERSSISRWMEEG 327
S KK ++ I + + P+ DF CPIS+++MRDP + + G TYE +W+ G
Sbjct: 211 SPKKGRKETIEKSKSNESDEDPRLEDFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSG 270
Query: 328 HTTCPKTGQMLGHNRLVPNRALRNLIVQW 356
T PKT + L ++ LVPN LR +I W
Sbjct: 271 GRTSPKTNKPLENHNLVPNHTLRIIIKDW 299
>AT4G12710.1 | Symbols: | ARM repeat superfamily protein |
chr4:7485040-7486733 REVERSE LENGTH=402
Length = 402
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 124/262 (47%), Gaps = 12/262 (4%)
Query: 397 QQLANGSQFGKTIAAREIRFLAKTG---RENRAFIAEAGAIPYLRNLLSSHNAVAQENSV 453
++L +G + AA+EIR L + R+ +A+AG IP L +L S N A+ S+
Sbjct: 52 KKLLHGDLDFRIEAAKEIRKLLRKSPVKSSARSKLADAGVIPPLVPMLFSSNVDARHASL 111
Query: 454 TALLNLSI-FDKNKSRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVI 512
ALLNL++ ++NK I+ + G + ++ +L+ H RE A A + +LSA K +I
Sbjct: 112 LALLNLAVRNERNKIEIV-KAGAVPPLIQILKL-HNASLRELATAAILTLSAAPANKAMI 169
Query: 513 ADRTGAVEALAGLLQDGTPRGKKDAVTALFNLSTHTENCVRMIEXXXXXXXXXXXXXXXX 572
+G L +L GT +GK DAVTAL NLS E +++
Sbjct: 170 IS-SGVPPLLIQMLSSGTVQGKVDAVTALHNLSACKEYSAPILDAKAVYPLIHLLKECKK 228
Query: 573 XXXXXXXXXXXXRQPI-----GAKAVVTEDEAVVGLIGMMRCGTPRGKENAVAALLELCR 627
+ G A+ + ++ ++ L+ + G+P E+AV ALL LCR
Sbjct: 229 HSKFAEKATALVEMILSHSEDGRNAITSCEDGILTLVETVEDGSPLSIEHAVGALLSLCR 288
Query: 628 GGGAAATERVVKAPALAGLLQT 649
+ ++K A+ GLL +
Sbjct: 289 SDRDKYRKLILKEGAIPGLLSS 310
>AT2G45910.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr2:18894520-18898212 FORWARD
LENGTH=834
Length = 834
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%)
Query: 291 PKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRALR 350
P F CPI ++M+DP + + G TYE +I W++ H T P T L H L+ N ALR
Sbjct: 764 PPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVKLSHTSLIANHALR 823
Query: 351 NLIVQWCSAH 360
+ I +W H
Sbjct: 824 SAIQEWLQHH 833
>AT5G65500.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:26181093-26183997 REVERSE
LENGTH=791
Length = 791
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%)
Query: 290 VPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRAL 349
+P F CPI ++M++P + + G +YE +I W+ GH T P T L + L PN L
Sbjct: 715 IPSVFMCPILQEVMKNPHVAADGFSYELEAIQEWLSMGHDTSPMTNLRLDYQMLTPNHTL 774
Query: 350 RNLIVQWCS 358
R+LI W S
Sbjct: 775 RSLIQDWHS 783
>AT5G57035.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:23080743-23083819 FORWARD
LENGTH=789
Length = 789
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%)
Query: 291 PKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRALR 350
P + CPI ++M DP I + G TYER +I W+++ P T L H+ L PN LR
Sbjct: 709 PTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVSPVTKHRLKHSDLTPNHTLR 768
Query: 351 NLIVQWCS 358
+ I +W S
Sbjct: 769 SAIREWRS 776
>AT5G51270.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:20835137-20838262 REVERSE
LENGTH=819
Length = 819
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 291 PKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRALR 350
P F CP+ D+M++P I + G TY+R +I WM E H T P T L + L+PN L
Sbjct: 750 PSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWM-ENHRTSPVTNSPLQNVNLLPNHTLY 808
Query: 351 NLIVQW 356
IV+W
Sbjct: 809 AAIVEW 814
>AT5G40140.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr5:16057347-16058999 FORWARD
LENGTH=550
Length = 550
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 72/137 (52%), Gaps = 3/137 (2%)
Query: 414 IRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQENSVTALLNLSIFDKNKSRIMDEE 473
IR + + +R + I L++L+ S A Q N L+NLS+ NK +I+
Sbjct: 252 IRRITRIDESSRISLCTTRVISALKSLIVSRYATVQVNVTAVLVNLSLEKSNKVKIV-RS 310
Query: 474 GCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGAVEALAGLLQDGTPRG 533
G + ++DVL+ G + EA+E++A +FSL A+ D K G +E L L++ GT
Sbjct: 311 GIVPPLIDVLKCG-SVEAQEHSAGVIFSL-ALEDENKTAIGVLGGLEPLLHLIRVGTELT 368
Query: 534 KKDAVTALFNLSTHTEN 550
+ D+ AL++LS N
Sbjct: 369 RHDSALALYHLSLVQSN 385
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 286 TFLTVPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVP 345
T +P +F CPIS LM DP+I+S+G +YER+ + G T P + ++P
Sbjct: 54 TKTEIPAEFLCPISGSLMADPIIVSSGHSYERACVIACKTLGFTPTPPP----DFSTVIP 109
Query: 346 NRALRNLIVQWCSAHGVPLDPPEVLEAEA 374
N AL++ I WC P PP+ L + A
Sbjct: 110 NLALKSAIHSWCERRCFP--PPKPLNSAA 136
>AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 |
senescence-associated E3 ubiquitin ligase 1 |
chr1:7217812-7220609 FORWARD LENGTH=801
Length = 801
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 111/268 (41%), Gaps = 33/268 (12%)
Query: 294 FCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHT-----TCPKTGQMLGHNRLVPNRA 348
F CP++ ++M DPV + G+T+ER +I +W +E +CP T Q L + + A
Sbjct: 27 FICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSASIA 86
Query: 349 LRNLIVQWCSAH-GVPLD-----------PPEVLEA----EAFASACPXXXXXXXXXXXX 392
LRN I +W S + LD ++L+A
Sbjct: 87 LRNTIEEWRSRNDAAKLDIARQSLFLGNAETDILQALMHVRQICRTIRSNRHGVRNSQLI 146
Query: 393 XXXIQQLANGSQFGKTIAAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQENS 452
I L + S + A + ++ + + E++A +AE + L LS + +E +
Sbjct: 147 HMIIDMLKSTSHRVRYKALQTLQVVVEGDDESKAIVAEGDTVRTLVKFLSHEPSKGREAA 206
Query: 453 VTALLNLSIFDKNKSRIMDEEGCLGSIVDVLRFGHTTEAREN------AAATLFSLSAVH 506
V+ L LS + +I G L +L G T+ EN A TL ++
Sbjct: 207 VSLLFELSKSEALCEKIGSIHGAL-----ILLVGLTSSNSENVSIVEKADRTLENMERSE 261
Query: 507 DYKKVIADRTGAVEALAGLLQDGTPRGK 534
+ + +A G ++ L G L +G+P K
Sbjct: 262 EIVRQMAS-YGRLQPLLGKLLEGSPETK 288
>AT2G19410.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr2:8404901-8409012 REVERSE LENGTH=801
Length = 801
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 288 LTVPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNR 347
L P + CPI ++M +P I + G TYER +I W+E+ H P T Q L H +L PN
Sbjct: 723 LRAPSHYFCPILREIMEEPEIAADGFTYERKAILAWLEK-HNISPVTRQKLDHFKLTPNH 781
Query: 348 ALRNLIVQWCS 358
LR+ I W S
Sbjct: 782 TLRSAIRDWKS 792
>AT1G01670.1 | Symbols: | RING/U-box superfamily protein |
chr1:242943-245163 REVERSE LENGTH=365
Length = 365
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 291 PKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRALR 350
P+ F CPIS D+M++P + + G TYE RW+ G P T L + L+PN LR
Sbjct: 295 PQCFICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKSPMTNLRLENRNLIPNLVLR 354
Query: 351 NLIVQWCSAH 360
+ I W H
Sbjct: 355 SAIKDWLQQH 364
>AT3G47820.1 | Symbols: PUB39 | PLANT U-BOX 39 |
chr3:17644434-17645963 FORWARD LENGTH=509
Length = 509
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 80/144 (55%), Gaps = 7/144 (4%)
Query: 417 LAKTGREN---RAFIAEAGAIPYLRNLLSSHNAVAQENSVTALLNLSIFDKNKSRIMDEE 473
L KT R N R + + LR+L+ S + Q N+ +++NLS+ NK +I+
Sbjct: 207 LRKTTRSNETTRISLCTDRILSLLRSLIVSRYNIVQTNAAASIVNLSLEKPNKLKIV-RS 265
Query: 474 GCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGAVEALAGLLQDG-TPR 532
G + ++DVL+ G +TEA+E+ LFSL AV + K++ GAVE L L+ + R
Sbjct: 266 GFVPLLIDVLKSG-STEAQEHVIGALFSL-AVEEENKMVIGVLGAVEPLLHALRSSESER 323
Query: 533 GKKDAVTALFNLSTHTENCVRMIE 556
++DA AL++LS N R+++
Sbjct: 324 ARQDAALALYHLSLIPNNRSRLVK 347
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 290 VPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRAL 349
P +F CPI+ LM DPV++++GQT+ER S+ G + ++PN A+
Sbjct: 10 TPTEFLCPITGFLMSDPVVVASGQTFERISVQVCRNLSFAPKLHDGTQPDLSTVIPNLAM 69
Query: 350 RNLIVQWC 357
++ I+ WC
Sbjct: 70 KSTILSWC 77
>AT5G65200.1 | Symbols: PUB38, ATPUB38 | plant U-box 38 |
chr5:26048173-26049843 REVERSE LENGTH=556
Length = 556
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 82/143 (57%), Gaps = 4/143 (2%)
Query: 414 IRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQENSVTALLNLSIFDKNKSRIMDEE 473
+R + +T E R + + L+N++ S ++ Q N++ +L+NLS+ KNK I+
Sbjct: 248 MRKMTRTNDEARVSLCSPRILSLLKNMIVSRYSLVQTNALASLVNLSLDKKNKLTIV-RL 306
Query: 474 GCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGAVEALAGLLQDG-TPR 532
G + ++DVL+ G + EA+E+AA T+FSLS D K I GA++ L L+ + R
Sbjct: 307 GFVPILIDVLKSG-SREAQEHAAGTIFSLSLEDDNKMPIG-VLGALQPLLHALRAAESDR 364
Query: 533 GKKDAVTALFNLSTHTENCVRMI 555
+ D+ AL++L+ + N +++
Sbjct: 365 TRHDSALALYHLTLNQTNRSKLV 387
>AT4G31890.2 | Symbols: | ARM repeat superfamily protein |
chr4:15427290-15429049 REVERSE LENGTH=518
Length = 518
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 83/158 (52%), Gaps = 10/158 (6%)
Query: 407 KTIAAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAV-AQENSVTALLNLSI-FDK 464
K AA E+R LAK E R +A GAIP L +++ V AQ S+ ALLNL I D
Sbjct: 160 KITAASEVRLLAKEDSEARVTLAMLGAIPPLVSMIDDSRIVDAQIASLYALLNLGIGNDA 219
Query: 465 NKSRIMDEEGCLGSIVDVLRFGHT--TEARENAAATLFSLSAVHDYKKVIADRTGAVEAL 522
NK+ I+ + G + ++ ++ +T E E A LSA+ K +I +GA+ L
Sbjct: 220 NKAAIV-KAGAVHKMLKLIESPNTPDQEIAEAVVANFLGLSALDSNKPIIGS-SGAIIFL 277
Query: 523 AGLLQD----GTPRGKKDAVTALFNLSTHTENCVRMIE 556
LQ+ + + ++DA+ AL+NLS + N ++E
Sbjct: 278 VKTLQNLDETSSSQAREDALRALYNLSIYQPNVSFILE 315
>AT4G31890.1 | Symbols: | ARM repeat superfamily protein |
chr4:15427290-15429049 REVERSE LENGTH=518
Length = 518
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 83/158 (52%), Gaps = 10/158 (6%)
Query: 407 KTIAAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAV-AQENSVTALLNLSI-FDK 464
K AA E+R LAK E R +A GAIP L +++ V AQ S+ ALLNL I D
Sbjct: 160 KITAASEVRLLAKEDSEARVTLAMLGAIPPLVSMIDDSRIVDAQIASLYALLNLGIGNDA 219
Query: 465 NKSRIMDEEGCLGSIVDVLRFGHT--TEARENAAATLFSLSAVHDYKKVIADRTGAVEAL 522
NK+ I+ + G + ++ ++ +T E E A LSA+ K +I +GA+ L
Sbjct: 220 NKAAIV-KAGAVHKMLKLIESPNTPDQEIAEAVVANFLGLSALDSNKPIIGS-SGAIIFL 277
Query: 523 AGLLQD----GTPRGKKDAVTALFNLSTHTENCVRMIE 556
LQ+ + + ++DA+ AL+NLS + N ++E
Sbjct: 278 VKTLQNLDETSSSQAREDALRALYNLSIYQPNVSFILE 315
>AT3G03440.1 | Symbols: | ARM repeat superfamily protein |
chr3:815709-818568 FORWARD LENGTH=408
Length = 408
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 124/256 (48%), Gaps = 13/256 (5%)
Query: 407 KTIAAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQENSVTALLNLSIFD-KN 465
+ AA+EIR L KT R ++A P + L E ++ ALLNL++ D KN
Sbjct: 81 RLFAAKEIRRLTKTSHRCRRHFSQA-VEPLVSMLRFDSPESHHEAALLALLNLAVKDEKN 139
Query: 466 KSRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGAVEALAGL 525
K I+ E G L I++ L+ T +E A+A+L +LSA + K +I G V L +
Sbjct: 140 KVSII-EAGALEPIINFLQSNSPT-LQEYASASLLTLSASANNKPIIG-ANGVVPLLVKV 196
Query: 526 LQDGTPRGKKDAVTALFNLSTHTENCVRMIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXR 585
++ G+P+ K DAV AL NLST +N + MI
Sbjct: 197 IKHGSPQAKADAVMALSNLSTLPDN-LSMILATKPLSPILNLLKSSKKSSKTSEKCCSLI 255
Query: 586 QPI---GAKA---VVTEDEAVVGLIGMMRCGTPRGKENAVAALLELCRGGGAAATERVVK 639
+ + G +A +V+++ V+ ++ ++ G+ + +E+AV LL LC+ + E +++
Sbjct: 256 EALMVSGEEARTGLVSDEGGVLAVVEVLENGSLQAREHAVGVLLTLCQSDRSKYREPILR 315
Query: 640 APALAGLLQTLLFTGT 655
+ GLL+ L GT
Sbjct: 316 EGVIPGLLE-LTVQGT 330
>AT1G76390.2 | Symbols: | ARM repeat superfamily protein |
chr1:28655914-28658531 FORWARD LENGTH=811
Length = 811
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 110/273 (40%), Gaps = 44/273 (16%)
Query: 294 FCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHT-----TCPKTGQMLGHNRLVPNRA 348
F CP++ +M +PV + GQT+ER +I +W +E +CP T + L L P+ A
Sbjct: 29 FICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSPSIA 88
Query: 349 LRNLIVQWCSAH-GVPLDPPEVLEAEAFASACPXXXXXXXXXXXXXXXIQQLANG-SQFG 406
LRN I +W + + + LD Q L G ++
Sbjct: 89 LRNTIEEWRARNDALKLDIAR----------------------------QSLYLGNAETN 120
Query: 407 KTIAAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQENSVTALLNLSIF---D 463
+A + +R + + R+ R + + + ++L S + E AL L + D
Sbjct: 121 ILLALKNVREICRNIRKIRQRVCNPQLVRLITDMLKSS---SHEVRCKALQTLQVVVEGD 177
Query: 464 KNKSRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGAVEALA 523
+ I+ E + +IV L ++ RE A + LF LS + I GA+ L
Sbjct: 178 EESKAIVAEGDTVRTIVKFLS-QEPSKGREAAVSVLFELSKSEALCEKIGSIHGAIILLV 236
Query: 524 GLLQDGTPRGK--KDAVTALFNLSTHTENCVRM 554
GL + + A L NL EN +M
Sbjct: 237 GLTSSKSENVSTVEKADKTLTNLERSEENVRQM 269
>AT1G76390.1 | Symbols: | ARM repeat superfamily protein |
chr1:28655914-28658531 FORWARD LENGTH=811
Length = 811
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 110/273 (40%), Gaps = 44/273 (16%)
Query: 294 FCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHT-----TCPKTGQMLGHNRLVPNRA 348
F CP++ +M +PV + GQT+ER +I +W +E +CP T + L L P+ A
Sbjct: 29 FICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSPSIA 88
Query: 349 LRNLIVQWCSAH-GVPLDPPEVLEAEAFASACPXXXXXXXXXXXXXXXIQQLANG-SQFG 406
LRN I +W + + + LD Q L G ++
Sbjct: 89 LRNTIEEWRARNDALKLDIAR----------------------------QSLYLGNAETN 120
Query: 407 KTIAAREIRFLAKTGRENRAFIAEAGAIPYLRNLLSSHNAVAQENSVTALLNLSIF---D 463
+A + +R + + R+ R + + + ++L S + E AL L + D
Sbjct: 121 ILLALKNVREICRNIRKIRQRVCNPQLVRLITDMLKSS---SHEVRCKALQTLQVVVEGD 177
Query: 464 KNKSRIMDEEGCLGSIVDVLRFGHTTEARENAAATLFSLSAVHDYKKVIADRTGAVEALA 523
+ I+ E + +IV L ++ RE A + LF LS + I GA+ L
Sbjct: 178 EESKAIVAEGDTVRTIVKFLS-QEPSKGREAAVSVLFELSKSEALCEKIGSIHGAIILLV 236
Query: 524 GLLQDGTPRGK--KDAVTALFNLSTHTENCVRM 554
GL + + A L NL EN +M
Sbjct: 237 GLTSSKSENVSTVEKADKTLTNLERSEENVRQM 269
>AT3G49060.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr3:18187386-18191878 REVERSE
LENGTH=805
Length = 805
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%)
Query: 291 PKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRALR 350
P + CPI ++M+DP+I + G TYE +I W+ GH T P T + L+PN AL
Sbjct: 736 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALH 795
Query: 351 NLIVQW 356
I W
Sbjct: 796 LAIQDW 801
>AT3G49060.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr3:18187054-18191878 REVERSE
LENGTH=795
Length = 795
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%)
Query: 291 PKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRALR 350
P + CPI ++M+DP+I + G TYE +I W+ GH T P T + L+PN AL
Sbjct: 726 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALH 785
Query: 351 NLIVQW 356
I W
Sbjct: 786 LAIQDW 791
>AT4G25160.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr4:12903360-12906669 REVERSE
LENGTH=835
Length = 835
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 291 PKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRALR 350
P F CP+ D+M +P + + G TY+R +I W++E H T P T L L+PN L
Sbjct: 767 PTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLKE-HNTSPMTDSPLHSKNLLPNYTLY 825
Query: 351 NLIVQWCS 358
I++W S
Sbjct: 826 TAIMEWRS 833
>AT5G61560.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24753476-24756506 FORWARD
LENGTH=796
Length = 796
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 276 RRLITQEIAETFLTVPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTG 335
R + + + P F CPI+ D+M +P + S G TYE+ +I W+++ H + P T
Sbjct: 711 RNMFADNLIDHHHNAPTHFYCPITKDVMENPCVASDGYTYEKRAIKEWLQKNHKS-PMTD 769
Query: 336 QMLGHNRLVPNRALRNLIVQWCS 358
+ L+PN +L + I +W S
Sbjct: 770 LPFPSDSLLPNHSLLSAIKEWRS 792
>AT5G61560.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24753476-24756506 FORWARD
LENGTH=794
Length = 794
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 276 RRLITQEIAETFLTVPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTG 335
R + + + P F CPI+ D+M +P + S G TYE+ +I W+++ H + P T
Sbjct: 709 RNMFADNLIDHHHNAPTHFYCPITKDVMENPCVASDGYTYEKRAIKEWLQKNHKS-PMTD 767
Query: 336 QMLGHNRLVPNRALRNLIVQWCS 358
+ L+PN +L + I +W S
Sbjct: 768 LPFPSDSLLPNHSLLSAIKEWRS 790
>AT1G66160.2 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY
protein 1 | chr1:24637218-24638513 FORWARD LENGTH=415
Length = 415
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 18/88 (20%)
Query: 274 SKRRLI--TQEIAETFLTVPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTC 331
SK+ +I T E +T+P F CPIS +LM+DP W E G+ TC
Sbjct: 15 SKKEIIPVTSCSEEVEITIPSQFQCPISYELMKDP----------------WFESGYQTC 58
Query: 332 PKTGQMLGHNRLVPNRALRNLIVQWCSA 359
P T +L +PN +R +I WC +
Sbjct: 59 PVTNTVLTSLEQIPNHTIRRMIQGWCGS 86
>AT1G56030.1 | Symbols: | RING/U-box superfamily protein |
chr1:20957098-20958550 REVERSE LENGTH=371
Length = 371
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 298 ISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRALRNLI 353
+ D+M++P + + G TYE +I +W+ GH T P T L H PNRALR+ I
Sbjct: 311 LKTDVMKNPHMAADGFTYELEAIQKWINTGHRTSPMTNLKLSHFSFFPNRALRSAI 366
>AT3G07370.1 | Symbols: ATCHIP, CHIP | carboxyl terminus of
HSC70-interacting protein | chr3:2358323-2360301 REVERSE
LENGTH=278
Length = 278
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%)
Query: 290 VPKDFCCPISLDLMRDPVIISTGQTYERSSISRWMEEGHTTCPKTGQMLGHNRLVPNRAL 349
VP CC I+L++ RDPVI +G TYER++I +++ P T + + LVPN A+
Sbjct: 200 VPDYLCCNITLEIFRDPVISPSGVTYERAAILEHLKKVGKFDPITREKIDPANLVPNLAI 259
Query: 350 RNLIVQWCSAH 360
+ + + H
Sbjct: 260 KEAVAAYLEKH 270