Miyakogusa Predicted Gene
- Lj6g3v1966340.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1966340.1 tr|C6ZJY9|C6ZJY9_SOYBN Serine
hydroxymethyltransferase 4 OS=Glycine max PE=2
SV=1,84.01,0,SHMT,Serine hydroxymethyltransferase; PLP-dependent
transferases,Pyridoxal phosphate-dependent trans,CUFF.60308.1
(516 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G32520.2 | Symbols: SHM3 | serine hydroxymethyltransferase 3 ... 827 0.0
AT4G32520.1 | Symbols: SHM3, AtSHMT3 | serine hydroxymethyltrans... 827 0.0
AT4G37930.1 | Symbols: SHM1, STM, SHMT1 | serine transhydroxymet... 591 e-169
AT5G26780.1 | Symbols: SHM2 | serine hydroxymethyltransferase 2 ... 587 e-168
AT5G26780.2 | Symbols: SHM2 | serine hydroxymethyltransferase 2 ... 577 e-165
AT5G26780.3 | Symbols: SHM2 | serine hydroxymethyltransferase 2 ... 577 e-165
AT4G13930.1 | Symbols: SHM4 | serine hydroxymethyltransferase 4 ... 549 e-156
AT4G13890.1 | Symbols: SHM5, EDA36, EDA37 | Pyridoxal phosphate ... 530 e-150
AT1G22020.1 | Symbols: SHM6 | serine hydroxymethyltransferase 6 ... 496 e-140
AT1G36370.1 | Symbols: SHM7 | serine hydroxymethyltransferase 7 ... 479 e-135
>AT4G32520.2 | Symbols: SHM3 | serine hydroxymethyltransferase 3 |
chr4:15689642-15692334 REVERSE LENGTH=529
Length = 529
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/529 (75%), Positives = 444/529 (83%), Gaps = 13/529 (2%)
Query: 1 MQACTGVAMMGSMQQPAWTKGQSFPAIGYGSNGFIPQVKFCNVKPCKASSL--------- 51
MQAC G M S+QQP +G FP I F Q+KF KP ++S L
Sbjct: 1 MQACCGGNSMASLQQPGRVQGSVFPPIMPPVTKFSQQLKFNISKPFRSSFLKRNLVSEMR 60
Query: 52 --SISVPEIKGDGSRI--LDSGLSEVDPEVYAIIGKEKDRQFKSLELIASENFTSRAVME 107
S+S+P ++ I D GL EVDPEV II KEKDRQF+SLELIASENFTSRAVME
Sbjct: 61 ASSVSLPNVEISSKEIPFEDYGLGEVDPEVRTIITKEKDRQFRSLELIASENFTSRAVME 120
Query: 108 AVGSCLTNKYSEGLPGKRYYGGNEFIDELEIKCQERALAAFHVDGNKWGVNVQPLSGSPA 167
AVGSCLTNKYSEGLPGKRYYGGNE+ID+LE CQ RALAAF +D KWGVNVQPLSGSPA
Sbjct: 121 AVGSCLTNKYSEGLPGKRYYGGNEYIDQLETLCQNRALAAFRLDSTKWGVNVQPLSGSPA 180
Query: 168 NFAVYTALLKPHDRIMGLDLPHGGHLSHGFMTPKRRVSATSIYFESMPYRLDESTGFIDY 227
NFAVYTA+L PHDRIMGLDLPHGGHLSHGFMT KRRVS TSIYFESMPYRLDESTG +DY
Sbjct: 181 NFAVYTAILSPHDRIMGLDLPHGGHLSHGFMTAKRRVSGTSIYFESMPYRLDESTGIVDY 240
Query: 228 DMLEKTAILFRPKLIIAGASAYPRDIDYPRMRKIADQVGAFLMMDMAHISGLVAASVLAN 287
DMLEKTA LFRPKLIIAGASAY RD DYPRMRKIAD VGAFLMMDMAHISGLVAASV+A+
Sbjct: 241 DMLEKTATLFRPKLIIAGASAYSRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVAD 300
Query: 288 PFDFCDIVTTTTHKSLRGPRGGMIFFKKDTVHGVDLEPAINNAVFPGLQGGPHNHTIGGL 347
PF++CDIVTTTTHKSLRGPRGGMIFF+KD ++GVDLE A+NNAVFPGLQGGPHNHTIGGL
Sbjct: 301 PFEYCDIVTTTTHKSLRGPRGGMIFFRKDPINGVDLESAVNNAVFPGLQGGPHNHTIGGL 360
Query: 348 AVCLEHAQSPEFKVYQNQVVANCRALANRLVELGYKLVSGGSDNHLVLVDLRPSGIDGAR 407
AVCL+HAQSPEFK YQ +VV+NCRALANRLVELG+KLVSGGSDNHLVLVDLRP G+DGAR
Sbjct: 361 AVCLKHAQSPEFKAYQKRVVSNCRALANRLVELGFKLVSGGSDNHLVLVDLRPMGMDGAR 420
Query: 408 TEKILDLASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLGEKEFALIADLIHEGVQIS 467
EKILD+ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGL EK+F ++AD I EGV+I+
Sbjct: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLSEKDFVVVADFIKEGVEIT 480
Query: 468 LEAKSLASGSKLQDFMNLVLSPEFPLQDKVTELRKKVEALATRYPIPGV 516
+EAK A GSKLQDF V SPEFPL+++V L+++VE +R+PIPGV
Sbjct: 481 MEAKKAAPGSKLQDFNKFVTSPEFPLKERVKSLKERVETFTSRFPIPGV 529
>AT4G32520.1 | Symbols: SHM3, AtSHMT3 | serine
hydroxymethyltransferase 3 | chr4:15689642-15692334
REVERSE LENGTH=529
Length = 529
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/529 (75%), Positives = 444/529 (83%), Gaps = 13/529 (2%)
Query: 1 MQACTGVAMMGSMQQPAWTKGQSFPAIGYGSNGFIPQVKFCNVKPCKASSL--------- 51
MQAC G M S+QQP +G FP I F Q+KF KP ++S L
Sbjct: 1 MQACCGGNSMASLQQPGRVQGSVFPPIMPPVTKFSQQLKFNISKPFRSSFLKRNLVSEMR 60
Query: 52 --SISVPEIKGDGSRI--LDSGLSEVDPEVYAIIGKEKDRQFKSLELIASENFTSRAVME 107
S+S+P ++ I D GL EVDPEV II KEKDRQF+SLELIASENFTSRAVME
Sbjct: 61 ASSVSLPNVEISSKEIPFEDYGLGEVDPEVRTIITKEKDRQFRSLELIASENFTSRAVME 120
Query: 108 AVGSCLTNKYSEGLPGKRYYGGNEFIDELEIKCQERALAAFHVDGNKWGVNVQPLSGSPA 167
AVGSCLTNKYSEGLPGKRYYGGNE+ID+LE CQ RALAAF +D KWGVNVQPLSGSPA
Sbjct: 121 AVGSCLTNKYSEGLPGKRYYGGNEYIDQLETLCQNRALAAFRLDSTKWGVNVQPLSGSPA 180
Query: 168 NFAVYTALLKPHDRIMGLDLPHGGHLSHGFMTPKRRVSATSIYFESMPYRLDESTGFIDY 227
NFAVYTA+L PHDRIMGLDLPHGGHLSHGFMT KRRVS TSIYFESMPYRLDESTG +DY
Sbjct: 181 NFAVYTAILSPHDRIMGLDLPHGGHLSHGFMTAKRRVSGTSIYFESMPYRLDESTGIVDY 240
Query: 228 DMLEKTAILFRPKLIIAGASAYPRDIDYPRMRKIADQVGAFLMMDMAHISGLVAASVLAN 287
DMLEKTA LFRPKLIIAGASAY RD DYPRMRKIAD VGAFLMMDMAHISGLVAASV+A+
Sbjct: 241 DMLEKTATLFRPKLIIAGASAYSRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVAD 300
Query: 288 PFDFCDIVTTTTHKSLRGPRGGMIFFKKDTVHGVDLEPAINNAVFPGLQGGPHNHTIGGL 347
PF++CDIVTTTTHKSLRGPRGGMIFF+KD ++GVDLE A+NNAVFPGLQGGPHNHTIGGL
Sbjct: 301 PFEYCDIVTTTTHKSLRGPRGGMIFFRKDPINGVDLESAVNNAVFPGLQGGPHNHTIGGL 360
Query: 348 AVCLEHAQSPEFKVYQNQVVANCRALANRLVELGYKLVSGGSDNHLVLVDLRPSGIDGAR 407
AVCL+HAQSPEFK YQ +VV+NCRALANRLVELG+KLVSGGSDNHLVLVDLRP G+DGAR
Sbjct: 361 AVCLKHAQSPEFKAYQKRVVSNCRALANRLVELGFKLVSGGSDNHLVLVDLRPMGMDGAR 420
Query: 408 TEKILDLASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLGEKEFALIADLIHEGVQIS 467
EKILD+ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGL EK+F ++AD I EGV+I+
Sbjct: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLSEKDFVVVADFIKEGVEIT 480
Query: 468 LEAKSLASGSKLQDFMNLVLSPEFPLQDKVTELRKKVEALATRYPIPGV 516
+EAK A GSKLQDF V SPEFPL+++V L+++VE +R+PIPGV
Sbjct: 481 MEAKKAAPGSKLQDFNKFVTSPEFPLKERVKSLKERVETFTSRFPIPGV 529
>AT4G37930.1 | Symbols: SHM1, STM, SHMT1 | serine
transhydroxymethyltransferase 1 | chr4:17831891-17834742
REVERSE LENGTH=517
Length = 517
Score = 591 bits (1524), Expect = e-169, Method: Compositional matrix adjust.
Identities = 288/483 (59%), Positives = 362/483 (74%), Gaps = 15/483 (3%)
Query: 46 CKASSLSISVPEIKGDGSRI-----LDSGLSEVDPEVYAIIGKEKDRQFKSLELIASENF 100
C SSL + K + SR+ L++ L EVDPE+ II EK RQ+K LELI SENF
Sbjct: 27 CYMSSLPSEAVDEK-ERSRVTWPKQLNAPLEEVDPEIADIIEHEKARQWKGLELIPSENF 85
Query: 101 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEFIDELEIKCQERALAAFHVDGNKWGVNVQ 160
TS +VM+AVGS +TNKYSEG PG RYYGGNE+ID E CQ+RAL AF +D KWGVNVQ
Sbjct: 86 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPEKWGVNVQ 145
Query: 161 PLSGSPANFAVYTALLKPHDRIMGLDLPHGGHLSHGFMTPKRRVSATSIYFESMPYRLDE 220
PLSGSPANF VYTALLKPH+RIM LDLPHGGHLSHG+ T +++SA SI+FE+MPYRLDE
Sbjct: 146 PLSGSPANFHVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE 205
Query: 221 STGFIDYDMLEKTAILFRPKLIIAGASAYPRDIDYPRMRKIADQVGAFLMMDMAHISGLV 280
STG+IDYD +EK+A LFRPKLI+AGASAY R DY R+RK+ ++ A ++ DMAHISGLV
Sbjct: 206 STGYIDYDQMEKSATLFRPKLIVAGASAYARLYDYARIRKVCNKQKAVMLADMAHISGLV 265
Query: 281 AASVLANPFDFCDIVTTTTHKSLRGPRGGMIFFKKDTVH--------GVDLEPAINNAVF 332
AA+V+ +PFD+ D+VTTTTHKSLRGPRG MIFF+K D E IN AVF
Sbjct: 266 AANVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVLYDFEDKINQAVF 325
Query: 333 PGLQGGPHNHTIGGLAVCLEHAQSPEFKVYQNQVVANCRALANRLVELGYKLVSGGSDNH 392
PGLQGGPHNHTI GLAV L+ A + E+K YQ QV++N A L+E GY+LVSGG+DNH
Sbjct: 326 PGLQGGPHNHTITGLAVALKQATTSEYKAYQEQVLSNSAKFAQTLMERGYELVSGGTDNH 385
Query: 393 LVLVDLRPSGIDGARTEKILDLASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLGEKE 452
LVLV+L+P GIDG+R EK+L+ I NKN+VPGD SA+VPGGIR+G+PA+T+RG E++
Sbjct: 386 LVLVNLKPKGIDGSRVEKVLEAVHIASNKNTVPGDVSAMVPGGIRMGTPALTSRGFVEED 445
Query: 453 FALIADLIHEGVQISLEAKSLASGSKLQDFMNLVLSPEFPLQDKVTELRKKVEALATRYP 512
FA +A+ + V I+L+ KS A G+KL+DF++ + S +Q ++ +LR +VE A ++P
Sbjct: 446 FAKVAEYFDKAVTIALKVKSEAQGTKLKDFVSAMESSS-TIQSEIAKLRHEVEEFAKQFP 504
Query: 513 IPG 515
G
Sbjct: 505 TIG 507
>AT5G26780.1 | Symbols: SHM2 | serine hydroxymethyltransferase 2 |
chr5:9418299-9421725 FORWARD LENGTH=517
Length = 517
Score = 587 bits (1513), Expect = e-168, Method: Compositional matrix adjust.
Identities = 279/458 (60%), Positives = 353/458 (77%), Gaps = 9/458 (1%)
Query: 66 LDSGLSEVDPEVYAIIGKEKDRQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKR 125
L++ L E+DPEV II EK RQ+K ELI SENFTS +VM+AVGS +TNKYSEG PG R
Sbjct: 51 LNASLDEIDPEVADIIELEKARQWKGFELIPSENFTSLSVMQAVGSVMTNKYSEGYPGAR 110
Query: 126 YYGGNEFIDELEIKCQERALAAFHVDGNKWGVNVQPLSGSPANFAVYTALLKPHDRIMGL 185
YYGGNE+ID E CQ+RAL AF +D +KWGVNVQ LSGSPANF VYTALLKPH+RIM L
Sbjct: 111 YYGGNEYIDMAETLCQKRALEAFQLDPSKWGVNVQSLSGSPANFQVYTALLKPHERIMAL 170
Query: 186 DLPHGGHLSHGFMTPKRRVSATSIYFESMPYRLDESTGFIDYDMLEKTAILFRPKLIIAG 245
DLPHGGHLSHG+ T +++SA SI+FE+MPYRLDE+TG+IDYD LEK+A+LFRPKLI+AG
Sbjct: 171 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDENTGYIDYDQLEKSAVLFRPKLIVAG 230
Query: 246 ASAYPRDIDYPRMRKIADQVGAFLMMDMAHISGLVAASVLANPFDFCDIVTTTTHKSLRG 305
ASAY R DY R+RK+ ++ A ++ DMAHISGLVAA V+ +PF++ D+VTTTTHKSLRG
Sbjct: 231 ASAYARLYDYARIRKVCNKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG 290
Query: 306 PRGGMIFFKKDTVH--------GVDLEPAINNAVFPGLQGGPHNHTIGGLAVCLEHAQSP 357
PRG MIFF+K D E IN AVFPGLQGGPHNHTI GLAV L+ A++P
Sbjct: 291 PRGAMIFFRKGLKEINKQGKEVMYDYEDRINQAVFPGLQGGPHNHTITGLAVALKQARTP 350
Query: 358 EFKVYQNQVVANCRALANRLVELGYKLVSGGSDNHLVLVDLRPSGIDGARTEKILDLASI 417
E+K YQ+QV+ NC A L+ GY LVSGG+DNHLVLV+L+ GIDG+R EK+L+L I
Sbjct: 351 EYKAYQDQVLRNCSKFAETLLAKGYDLVSGGTDNHLVLVNLKNKGIDGSRVEKVLELVHI 410
Query: 418 TLNKNSVPGDKSALVPGGIRIGSPAMTTRGLGEKEFALIADLIHEGVQISLEAKSLASGS 477
NKN+VPGD SA+VPGGIR+G+PA+T+RG E++FA +A+ V+I+L+ K+ + G+
Sbjct: 411 AANKNTVPGDVSAMVPGGIRMGTPALTSRGFIEEDFAKVAEYFDLAVKIALKIKAESQGT 470
Query: 478 KLQDFMNLVLSPEFPLQDKVTELRKKVEALATRYPIPG 515
KL+DF+ + S E LQ ++++LR+ VE A ++P G
Sbjct: 471 KLKDFVATMQSNE-KLQSEMSKLREMVEEYAKQFPTIG 507
>AT5G26780.2 | Symbols: SHM2 | serine hydroxymethyltransferase 2 |
chr5:9418299-9421725 FORWARD LENGTH=533
Length = 533
Score = 577 bits (1487), Expect = e-165, Method: Compositional matrix adjust.
Identities = 279/474 (58%), Positives = 353/474 (74%), Gaps = 25/474 (5%)
Query: 66 LDSGLSEVDPEVYAIIGKEKDRQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKR 125
L++ L E+DPEV II EK RQ+K ELI SENFTS +VM+AVGS +TNKYSEG PG R
Sbjct: 51 LNASLDEIDPEVADIIELEKARQWKGFELIPSENFTSLSVMQAVGSVMTNKYSEGYPGAR 110
Query: 126 YYGGNEFIDELEIKCQERALAAFHVDGNKWGVNVQPLSGSPANFAVYTALLKPHDRIMGL 185
YYGGNE+ID E CQ+RAL AF +D +KWGVNVQ LSGSPANF VYTALLKPH+RIM L
Sbjct: 111 YYGGNEYIDMAETLCQKRALEAFQLDPSKWGVNVQSLSGSPANFQVYTALLKPHERIMAL 170
Query: 186 DLPHGGHLSHGFMTPKRRVSATSIYFESMPYRLDESTGFIDYDMLEKTAILFRPKLIIAG 245
DLPHGGHLSHG+ T +++SA SI+FE+MPYRLDE+TG+IDYD LEK+A+LFRPKLI+AG
Sbjct: 171 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDENTGYIDYDQLEKSAVLFRPKLIVAG 230
Query: 246 ASAYPRDIDYPRMRKIADQVGAFLMMDMAHISGLVAASVLANPFDFCDIVTTTTHKSLRG 305
ASAY R DY R+RK+ ++ A ++ DMAHISGLVAA V+ +PF++ D+VTTTTHKSLRG
Sbjct: 231 ASAYARLYDYARIRKVCNKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG 290
Query: 306 PRGGMIFFKKDTVH--------GVDLEPAINNAVFPGLQGGPHNHTIGGLAVCLEHAQSP 357
PRG MIFF+K D E IN AVFPGLQGGPHNHTI GLAV L+ A++P
Sbjct: 291 PRGAMIFFRKGLKEINKQGKEVMYDYEDRINQAVFPGLQGGPHNHTITGLAVALKQARTP 350
Query: 358 EFKVYQNQVVANCRALA----------------NRLVELGYKLVSGGSDNHLVLVDLRPS 401
E+K YQ+QV+ NC A L+ GY LVSGG+DNHLVLV+L+
Sbjct: 351 EYKAYQDQVLRNCSKFAELDIRPTVIISYGLSMQTLLAKGYDLVSGGTDNHLVLVNLKNK 410
Query: 402 GIDGARTEKILDLASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLGEKEFALIADLIH 461
GIDG+R EK+L+L I NKN+VPGD SA+VPGGIR+G+PA+T+RG E++FA +A+
Sbjct: 411 GIDGSRVEKVLELVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFIEEDFAKVAEYFD 470
Query: 462 EGVQISLEAKSLASGSKLQDFMNLVLSPEFPLQDKVTELRKKVEALATRYPIPG 515
V+I+L+ K+ + G+KL+DF+ + S E LQ ++++LR+ VE A ++P G
Sbjct: 471 LAVKIALKIKAESQGTKLKDFVATMQSNE-KLQSEMSKLREMVEEYAKQFPTIG 523
>AT5G26780.3 | Symbols: SHM2 | serine hydroxymethyltransferase 2 |
chr5:9418299-9421725 FORWARD LENGTH=533
Length = 533
Score = 577 bits (1487), Expect = e-165, Method: Compositional matrix adjust.
Identities = 279/474 (58%), Positives = 353/474 (74%), Gaps = 25/474 (5%)
Query: 66 LDSGLSEVDPEVYAIIGKEKDRQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKR 125
L++ L E+DPEV II EK RQ+K ELI SENFTS +VM+AVGS +TNKYSEG PG R
Sbjct: 51 LNASLDEIDPEVADIIELEKARQWKGFELIPSENFTSLSVMQAVGSVMTNKYSEGYPGAR 110
Query: 126 YYGGNEFIDELEIKCQERALAAFHVDGNKWGVNVQPLSGSPANFAVYTALLKPHDRIMGL 185
YYGGNE+ID E CQ+RAL AF +D +KWGVNVQ LSGSPANF VYTALLKPH+RIM L
Sbjct: 111 YYGGNEYIDMAETLCQKRALEAFQLDPSKWGVNVQSLSGSPANFQVYTALLKPHERIMAL 170
Query: 186 DLPHGGHLSHGFMTPKRRVSATSIYFESMPYRLDESTGFIDYDMLEKTAILFRPKLIIAG 245
DLPHGGHLSHG+ T +++SA SI+FE+MPYRLDE+TG+IDYD LEK+A+LFRPKLI+AG
Sbjct: 171 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDENTGYIDYDQLEKSAVLFRPKLIVAG 230
Query: 246 ASAYPRDIDYPRMRKIADQVGAFLMMDMAHISGLVAASVLANPFDFCDIVTTTTHKSLRG 305
ASAY R DY R+RK+ ++ A ++ DMAHISGLVAA V+ +PF++ D+VTTTTHKSLRG
Sbjct: 231 ASAYARLYDYARIRKVCNKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG 290
Query: 306 PRGGMIFFKKDTVH--------GVDLEPAINNAVFPGLQGGPHNHTIGGLAVCLEHAQSP 357
PRG MIFF+K D E IN AVFPGLQGGPHNHTI GLAV L+ A++P
Sbjct: 291 PRGAMIFFRKGLKEINKQGKEVMYDYEDRINQAVFPGLQGGPHNHTITGLAVALKQARTP 350
Query: 358 EFKVYQNQVVANCRALA----------------NRLVELGYKLVSGGSDNHLVLVDLRPS 401
E+K YQ+QV+ NC A L+ GY LVSGG+DNHLVLV+L+
Sbjct: 351 EYKAYQDQVLRNCSKFAELDIRPTVIISYGLSMQTLLAKGYDLVSGGTDNHLVLVNLKNK 410
Query: 402 GIDGARTEKILDLASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLGEKEFALIADLIH 461
GIDG+R EK+L+L I NKN+VPGD SA+VPGGIR+G+PA+T+RG E++FA +A+
Sbjct: 411 GIDGSRVEKVLELVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFIEEDFAKVAEYFD 470
Query: 462 EGVQISLEAKSLASGSKLQDFMNLVLSPEFPLQDKVTELRKKVEALATRYPIPG 515
V+I+L+ K+ + G+KL+DF+ + S E LQ ++++LR+ VE A ++P G
Sbjct: 471 LAVKIALKIKAESQGTKLKDFVATMQSNE-KLQSEMSKLREMVEEYAKQFPTIG 523
>AT4G13930.1 | Symbols: SHM4 | serine hydroxymethyltransferase 4 |
chr4:8048013-8050021 REVERSE LENGTH=471
Length = 471
Score = 549 bits (1414), Expect = e-156, Method: Compositional matrix adjust.
Identities = 273/459 (59%), Positives = 337/459 (73%), Gaps = 16/459 (3%)
Query: 67 DSGLSEVDPEVYAIIGKEKDRQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRY 126
++ L VDPE++ +I KEK RQ + +ELIASENFTS AV+EA+GS LTNKYSEG+PG RY
Sbjct: 9 NTSLVSVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGIPGNRY 68
Query: 127 YGGNEFIDELEIKCQERALAAFHVDGNKWGVNVQPLSGSPANFAVYTALLKPHDRIMGLD 186
YGGNEFIDE+E C+ RAL AFH D WGVNVQP SGSPANFA YTALL+PHDRIMGLD
Sbjct: 69 YGGNEFIDEIENLCRSRALEAFHCDPAAWGVNVQPYSGSPANFAAYTALLQPHDRIMGLD 128
Query: 187 LPHGGHLSHGFMTP-KRRVSATSIYFESMPYRLDESTGFIDYDMLEKTAILFRPKLIIAG 245
LP GGHL+HG+ T +++SATSIYFES+PY+++ +TG+IDYD LE+ A+ FRPKL+I G
Sbjct: 129 LPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKALDFRPKLLICG 188
Query: 246 ASAYPRDIDYPRMRKIADQVGAFLMMDMAHISGLVAASVLANPFDFCDIVTTTTHKSLRG 305
SAYPRD DY R R IAD+VGA L+ DMAHISGLVAA ANPF++CD+VTTTTHKSLRG
Sbjct: 189 GSAYPRDWDYARFRAIADKVGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTHKSLRG 248
Query: 306 PRGGMIFF-------KKDTVHGV--DLEPAINNAVFPGLQGGPHNHTIGGLAVCLEHAQS 356
PR GMIF+ KK G D E IN AVFP LQGGPHNH IG LAV L+ A +
Sbjct: 249 PRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPALQGGPHNHQIGALAVALKQANT 308
Query: 357 PEFKVYQNQVVANCRALANRLVELGYKLVSGGSDNHLVLVDLRPSGIDGARTEKILDLAS 416
P FKVY QV AN AL N L+ GY++V+ G++NHLVL DLRP G+ G + EK+ DL S
Sbjct: 309 PGFKVYAKQVKANAVALGNYLMSKGYQIVTNGTENHLVLWDLRPLGLTGNKVEKLCDLCS 368
Query: 417 ITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLGEKEFALIADLIHEGVQISLEAKSLASG 476
ITLNKN+V GD SAL PGG+RIG+PAMT+RGL EK+F I + + V ++L+ + G
Sbjct: 369 ITLNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIGEFLSRAVTLTLDIQK-TYG 427
Query: 477 SKLQDFMNLVLSPEFPLQDKVTELRKKVEALATRYPIPG 515
L+DF +++ + +L+ VE + Y +PG
Sbjct: 428 KLLKDFNKGLVN-----NKDLDQLKADVEKFSASYEMPG 461
>AT4G13890.1 | Symbols: SHM5, EDA36, EDA37 | Pyridoxal phosphate
(PLP)-dependent transferases superfamily protein |
chr4:8032146-8033718 REVERSE LENGTH=470
Length = 470
Score = 530 bits (1365), Expect = e-150, Method: Compositional matrix adjust.
Identities = 257/459 (55%), Positives = 332/459 (72%), Gaps = 16/459 (3%)
Query: 67 DSGLSEVDPEVYAIIGKEKDRQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRY 126
++ L VDPE+Y +I KEK RQ + +ELIA+ENFTS AVMEA+GSCLTNKYSEG+PG RY
Sbjct: 9 NTHLDFVDPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYSEGMPGNRY 68
Query: 127 YGGNEFIDELEIKCQERALAAFHVDGNKWGVNVQPLSGSPANFAVYTALLKPHDRIMGLD 186
YGG EFIDE+E C+ R+L AFH + KWGVNVQP SGSPANFA YTALL+PHDRIMGLD
Sbjct: 69 YGGTEFIDEIESLCRSRSLEAFHCNPEKWGVNVQPYSGSPANFAAYTALLQPHDRIMGLD 128
Query: 187 LPHGGHLSHGFMTP-KRRVSATSIYFESMPYRLDESTGFIDYDMLEKTAILFRPKLIIAG 245
LP GGH++HG+ + + +SATSIYFE++PY++D TG+IDYD LE+ A+ FRPKLII G
Sbjct: 129 LPSGGHITHGYYSSGGKNISATSIYFENLPYKVDSKTGYIDYDKLEEKAMDFRPKLIICG 188
Query: 246 ASAYPRDIDYPRMRKIADQVGAFLMMDMAHISGLVAASVLANPFDFCDIVTTTTHKSLRG 305
++YPR+ DY R R +AD+VGAFL+ DMAH S LVAA A+PF++CD+VTT+THKSLRG
Sbjct: 189 GTSYPREWDYARFRAVADKVGAFLLCDMAHNSALVAAQEAADPFEYCDVVTTSTHKSLRG 248
Query: 306 PRGGMIFF-------KKDTVHG--VDLEPAINNAVFPGLQGGPHNHTIGGLAVCLEHAQS 356
PR GMIF+ KK G D + IN+AVFP LQ GPHN+ IG LAV L+ +
Sbjct: 249 PRAGMIFYRKGPKPAKKGQPEGEVYDFDAKINSAVFPALQSGPHNNKIGALAVALKQVMA 308
Query: 357 PEFKVYQNQVVANCRALANRLVELGYKLVSGGSDNHLVLVDLRPSGIDGARTEKILDLAS 416
P FKVY QV AN LA+ L+ GY LV+ G+DNHL+L DLRP G+ G + EK+ +L
Sbjct: 309 PSFKVYAKQVKANAACLASYLINKGYTLVTDGTDNHLILWDLRPLGLTGNKVEKVCELCY 368
Query: 417 ITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLGEKEFALIADLIHEGVQISLEAKSLASG 476
ITLN+N+V GD S L PGG+RIG+PAMT+RGL EK+F I + +H V I+L+ + G
Sbjct: 369 ITLNRNAVFGDTSFLAPGGVRIGTPAMTSRGLVEKDFEKIGEFLHRAVTITLDIQE-QYG 427
Query: 477 SKLQDFMNLVLSPEFPLQDKVTELRKKVEALATRYPIPG 515
++DF +++ ++ E++ VE + +PG
Sbjct: 428 KVMKDFNKGLVN-----NKEIDEIKADVEEFTYDFDMPG 461
>AT1G22020.1 | Symbols: SHM6 | serine hydroxymethyltransferase 6 |
chr1:7754599-7757087 FORWARD LENGTH=599
Length = 599
Score = 496 bits (1277), Expect = e-140, Method: Compositional matrix adjust.
Identities = 247/503 (49%), Positives = 333/503 (66%), Gaps = 25/503 (4%)
Query: 28 GYGSNGFIPQVKFCNVKPCKASSLSISVPEIKGDGSRILDSGLSEVDPEVYAIIGKEKDR 87
G G N + + PCK + + + + + E DPE++ + KEK R
Sbjct: 104 GRGGNSY----SLASSSPCKRFVVDSGIESRRAVVRAWGNQSIEEADPEIHEFMEKEKQR 159
Query: 88 QFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEFIDELEIKCQERALAA 147
QF+ +ELIASENF RAVMEA+GS LTNKYSEG+PG RYY GN++ID++EI CQERALAA
Sbjct: 160 QFRGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIEILCQERALAA 219
Query: 148 FHVDGNKWGVNVQPLSGSPANFAVYTALLKPHDRIMGLDLPHGGHLSHGFMTP-KRRVSA 206
F ++ KWGVNVQP S + ANFAV+T LL P +RIMGLD P GGH+SHG+ TP ++VS
Sbjct: 220 FGLNHEKWGVNVQPYSCTSANFAVFTGLLMPGERIMGLDSPSGGHMSHGYYTPGGKKVSG 279
Query: 207 TSIYFESMPYRLDESTGFIDYDMLEKTAILFRPKLIIAGASAYPRDIDYPRMRKIADQVG 266
SI+FES PY++D TG+IDYD LE+ A+ +RPK++I G S+YPRD ++PR R IAD+ G
Sbjct: 280 ASIFFESFPYKVDPRTGYIDYDKLEEKALDYRPKILICGGSSYPRDWEFPRFRHIADKCG 339
Query: 267 AFLMMDMAHISGLVAASVLANPFDFCDIVTTTTHKSLRGPRGGMIFFKK----------- 315
A LM DMA ISGLVAA NPFD+CDIVT+TTHKSLRGPRGG+IF+K+
Sbjct: 340 AVLMFDMAQISGLVAAKESPNPFDYCDIVTSTTHKSLRGPRGGIIFYKRGLKPKKQSINL 399
Query: 316 ---DTVHGVDLEPAINNAVFPGLQGGPHNHTIGGLAVCLEHAQSPEFKVYQNQVVANCRA 372
++ D E IN +VFP LQGGPHN+ I LA+ L+ A SPE+K+Y QV N +A
Sbjct: 400 NHCESNIQYDFEEKINFSVFPSLQGGPHNNHIAALAIALKQAASPEYKLYMRQVKKNAKA 459
Query: 373 LANRLVELGYKLVSGGSDNHLVLVDLRPSGIDGARTEKILDLASITLNKNSVPGDKSALV 432
LA+ L+ KL++GG+DNHL+L DL P G+ G EK+ ++ IT+NK ++ + +
Sbjct: 460 LASALISRKCKLITGGTDNHLLLWDLTPLGLTGKVYEKVCEMCHITVNKVAIFSENGVIS 519
Query: 433 PGGIRIGSPAMTTRGLGEKEFALIADLIHEGVQISLEAKSLASGSKLQDFMNLVLSPEFP 492
PGG+RIGSPAMT+RG E EF +AD ++ QI+ A+ + + ++ E
Sbjct: 520 PGGVRIGSPAMTSRGCLEPEFETMADFLYRAAQIASAAQREHGKLQKEPLKSIYHCKE-- 577
Query: 493 LQDKVTELRKKVEALATRYPIPG 515
+ +LR +VEA AT++ +P
Sbjct: 578 ----IADLRNQVEAFATQFAMPA 596
>AT1G36370.1 | Symbols: SHM7 | serine hydroxymethyltransferase 7 |
chr1:13696240-13698576 REVERSE LENGTH=598
Length = 598
Score = 479 bits (1233), Expect = e-135, Method: Compositional matrix adjust.
Identities = 239/464 (51%), Positives = 318/464 (68%), Gaps = 21/464 (4%)
Query: 67 DSGLSEVDPEVYAIIGKEKDRQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRY 126
D + DP+++ ++ KEK RQ + +ELIASENF RAVMEA+GS LTNKYSEG+PG RY
Sbjct: 135 DQPIHLADPDIHELMEKEKQRQVRGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARY 194
Query: 127 YGGNEFIDELEIKCQERALAAFHVDGNKWGVNVQPLSGSPANFAVYTALLKPHDRIMGLD 186
Y GN++ID++E C ERAL AF ++ +KWGVNVQP S + ANFAVYT LL P +RIMGLD
Sbjct: 195 YTGNQYIDQIENLCIERALTAFGLESDKWGVNVQPYSCTSANFAVYTGLLLPGERIMGLD 254
Query: 187 LPHGGHLSHGFMTP-KRRVSATSIYFESMPYRLDESTGFIDYDMLEKTAILFRPKLIIAG 245
P GGH+SHG+ TP +++SA SI+FES PY+++ TG+IDYD LE A+ +RPK++I G
Sbjct: 255 SPSGGHMSHGYCTPGGKKISAASIFFESFPYKVNPQTGYIDYDKLEDKALDYRPKILICG 314
Query: 246 ASAYPRDIDYPRMRKIADQVGAFLMMDMAHISGLVAASVLANPFDFCDIVTTTTHKSLRG 305
S+YPRD D+ R+R+IAD+ GA LM DMAHISGLVA +NPFD CDIVT+TTHK LRG
Sbjct: 315 GSSYPRDWDFARVRQIADKCGAVLMCDMAHISGLVATKECSNPFDHCDIVTSTTHKGLRG 374
Query: 306 PRGGMIFFKK--------------DTVHGVDLEPAINNAVFPGLQGGPHNHTIGGLAVCL 351
PRGG+IF+++ DT DLE IN AVFP LQGGPHN+ I LA+ L
Sbjct: 375 PRGGIIFYRRGPKIRKQGHHSSHCDTSTHYDLEEKINFAVFPSLQGGPHNNHIAALAIAL 434
Query: 352 EHAQSPEFKVYQNQVVANCRALANRLVELGYKLVSGGSDNHLVLVDLRPSGIDGARTEKI 411
+ +PE+K Y Q+ N +ALA L+ +LV+GG+DNHL+L DL P G+ G EK+
Sbjct: 435 KQVATPEYKAYIQQMKKNAQALAAALLRRKCRLVTGGTDNHLLLWDLTPMGLTGKVYEKV 494
Query: 412 LDLASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLGEKEFALIADLIHEGVQISLEAK 471
++ ITLNK ++ GD + PGG+RIG+PAMTTRG E +F +AD + + QI+ A
Sbjct: 495 CEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTTRGCIESDFETMADFLIKAAQIT-SAL 553
Query: 472 SLASGSKLQDFMNLVLSPEFPLQDKVTELRKKVEALATRYPIPG 515
G ++F+ + + + ELR +VEA A +Y +P
Sbjct: 554 QREHGKSHKEFVKSLCT-----NKDIAELRNRVEAFALQYEMPA 592