Miyakogusa Predicted Gene

Lj6g3v1949720.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1949720.1 Non Chatacterized Hit- tr|G7IP39|G7IP39_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,74.91,0,seg,NULL,CUFF.60283.1
         (511 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G34640.1 | Symbols: PTAC12, HMR | plastid transcriptionally a...   515   e-146

>AT2G34640.1 | Symbols: PTAC12, HMR | plastid transcriptionally
           active 12 | chr2:14582061-14584345 REVERSE LENGTH=527
          Length = 527

 Score =  515 bits (1327), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 270/449 (60%), Positives = 308/449 (68%), Gaps = 17/449 (3%)

Query: 63  LEHVSVERPPYYSYMDSTSGQLEPASGARSSLPEEDLWPEGTVNQVRAGRAXXXXXXXXX 122
            E+V+VER PY+SYMDSTSG+LEPASGAR+S+P ED WPEGT ++VRA RA         
Sbjct: 77  FEYVTVERHPYHSYMDSTSGKLEPASGARASIPGEDYWPEGTSSRVRAARAPQPAGESSS 136

Query: 123 XXXXXXKPGSRRKKGRTXXXXXXXXXXXXXXXXXXTDTALLEVXXXXXXXXXXXXXXXXX 182
                  PGSRRKK R                    +T                      
Sbjct: 137 FPSYGKNPGSRRKKNR-----------KATEENVTVETNDEVSDSEDSSEEEENDSSDGF 185

Query: 183 XXXXXXXPVEEEASEFDLDKRLGVPHPFVDPKIKKPIEGTLTSEELWWNWRKPEKEQWSR 242
                    EEE + F+LDK+LG PHPF+DP  KK IE TLTS+E WWNWRKPEKEQWSR
Sbjct: 186 VTYKNEFEREEEETGFELDKKLGRPHPFIDPTKKKQIEKTLTSDESWWNWRKPEKEQWSR 245

Query: 243 WQRRRPDVETVFLKAMAETGQVKLYGEEPTLTECALYRARRHLYKXXXXXXXXXXXXXIG 302
           WQRRRPDVETVFLKAMAETGQVKLYGEEPTLTE +LYRARRHL+K              G
Sbjct: 246 WQRRRPDVETVFLKAMAETGQVKLYGEEPTLTETSLYRARRHLFKEERLQAERERLAKEG 305

Query: 303 PMAYYSEWVKVWKGDTSREAIQKHFEDTGEDENTQLIEMFSHQTAEEYRIMMGTDLRIPR 362
           PMA+YSEWVK WK DTSREA+QKHFE+TGEDENTQLIEMFSHQT  EYRIMMGTD+RI R
Sbjct: 306 PMAFYSEWVKAWKRDTSREAVQKHFEETGEDENTQLIEMFSHQTDREYRIMMGTDIRIKR 365

Query: 363 DPLAMRMREDQIKQIWGGDPVYPTVNYIQDPDVVIDFRGPDFHEPTPDMLAYLKEHGKII 422
           DPLAMRMREDQIKQIWGGDPVYPT+NYIQDP+ V+DFRGPDFHEPTP+ML+YLKE+GK+I
Sbjct: 366 DPLAMRMREDQIKQIWGGDPVYPTINYIQDPNAVMDFRGPDFHEPTPNMLSYLKENGKVI 425

Query: 423 SREELDKILAKEKNEQVELTDMDEAMAKAVDIXXXXXXXXXXXXXXXXXXXXXXXKIDRK 482
           SRE  + +L KEK EQ+E+ DMD+AMA+AV                         K+ R 
Sbjct: 426 SREMHEALLTKEKTEQLEVPDMDDAMAQAV------DIGENDDDEDDADVEKDDEKVPRN 479

Query: 483 WSVLKTTPQPRKSKAKPKKDGPMSLEEAV 511
           WSVLK TP+ R +K KPKK+G MSL+EAV
Sbjct: 480 WSVLKETPELRTAKPKPKKEGRMSLDEAV 508