Miyakogusa Predicted Gene
- Lj6g3v1947610.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1947610.1 Non Chatacterized Hit- tr|I1JV24|I1JV24_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,30.26,1e-18,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; SUBFAMILY NOT NAMED,NULL; FAMILY NOT N,CUFF.60269.1
(369 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 461 e-130
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 2e-54
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 1e-25
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 5e-25
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 2e-24
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 3e-24
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 4e-24
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 6e-24
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 108 8e-24
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 2e-23
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 3e-23
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 5e-23
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 8e-23
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 2e-21
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 4e-21
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 99 4e-21
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 5e-21
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 98 8e-21
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 8e-21
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 1e-20
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 1e-20
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 96 3e-20
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 96 3e-20
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 96 4e-20
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 6e-20
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 95 8e-20
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 1e-19
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 3e-19
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 4e-19
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 4e-19
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 5e-19
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 5e-19
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 5e-19
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 92 6e-19
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 92 7e-19
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 92 8e-19
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 1e-18
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 1e-18
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 2e-18
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 4e-18
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 5e-18
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 5e-18
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 89 5e-18
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 6e-18
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 8e-18
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 8e-18
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 1e-17
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 2e-17
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 7e-17
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 7e-17
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 8e-17
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 84 1e-16
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 84 2e-16
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 3e-16
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 3e-16
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 80 3e-15
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 3e-15
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 3e-15
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 8e-15
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 8e-15
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 8e-15
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 9e-15
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 1e-14
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 1e-14
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 77 2e-14
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 3e-14
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 8e-14
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 74 2e-13
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 73 3e-13
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 73 4e-13
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 3e-12
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 4e-12
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 4e-12
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 9e-12
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 1e-11
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 68 1e-11
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 67 2e-11
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 67 2e-11
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 67 3e-11
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 5e-11
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 65 1e-10
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 64 2e-10
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 63 3e-10
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 63 4e-10
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 63 4e-10
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 61 1e-09
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 60 3e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 60 3e-09
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 58 9e-09
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 58 1e-08
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 55 5e-08
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 55 8e-08
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 54 1e-07
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 54 2e-07
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 53 3e-07
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 53 3e-07
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 4e-06
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 461 bits (1186), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/319 (69%), Positives = 266/319 (83%)
Query: 48 LEKQFETWVNHLKPGFTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQ 107
LE QFETW+ +LKPGFT SDV AL + SDPDLALDIFRWTAQQR Y H Y T+IKQ
Sbjct: 58 LETQFETWIQNLKPGFTNSDVVIALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQ 117
Query: 108 LNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCK 167
G+R ETL+EEVIAGAC+ S+PLYN IIRFCCGRKFLF+RAFDVYNKMLRS+D K
Sbjct: 118 AITGKRNNFVETLIEEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSK 177
Query: 168 PDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCL 227
PDLETYTLL +SLL+RFNKL+VCYVYLHAVRSLTKQMK+ GVIPDTFVLNMIIKAY+KCL
Sbjct: 178 PDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCL 237
Query: 228 EVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYV 287
EVDEAIRVF EM LYG EPNAY+YSY+ +G+CEKGRV QGLGFYKEM+ K + P+ S Y+
Sbjct: 238 EVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYM 297
Query: 288 IIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKR 347
+++CSL+M+RR ++A+EV++DML NS SPD LTY TVL LCR R EA ++++E KKR
Sbjct: 298 VLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKR 357
Query: 348 DISMSEKMYKTLLDDLHYV 366
D M E+ Y+TL+D+++++
Sbjct: 358 DPVMGERNYRTLMDEVYFL 376
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 108/317 (34%), Positives = 187/317 (58%), Gaps = 5/317 (1%)
Query: 51 QFETWVNHLKPGFTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNA 110
+F ++ L P FTP ++ A+T DP L +F W +QQ + H + +Y I++L A
Sbjct: 125 KFHETISKLPPRFTPEELADAITLEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKLGA 184
Query: 111 GRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSED--CKP 168
+ YQ+ + +V +V++ G+ LYNSII F + RA +++ M+ S++ C+P
Sbjct: 185 AKMYQEMDDIVNQVLSVRHIGNENLYNSII-FYFTKAGKLIRAVNIFRHMVTSKNLECRP 243
Query: 169 DLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLE 228
+ TY +L+ +LL R N ++ +VY+ VRSL +QM G+ PD F LN ++K Y L
Sbjct: 244 TIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLH 303
Query: 229 VDEAIRVFHEMGL-YGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYV 287
V++A+R+FH+M + Y CEPN+++Y Y+ GLC +GR EMK K P+ +Y
Sbjct: 304 VNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYN 363
Query: 288 IIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKR 347
+V + A+ +DA++ L++M+ N R D ++Y+T+++ CR+ + DEA LL+ +++
Sbjct: 364 SLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREK 423
Query: 348 DISMSEKMYKTLLDDLH 364
+ + Y L++ LH
Sbjct: 424 QL-VDRDSYDKLVNVLH 439
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 132/265 (49%), Gaps = 16/265 (6%)
Query: 104 IIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRS 163
I++ + + R+ AE L+ +++ S+ +N +I F C RK L RA D+ KM +
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC-RKGLLGRAIDILEKMPQ- 372
Query: 164 EDCKPDLETYTLLYNSLLRRF---NKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMII 220
C+P+ +L YN LL F K+ YL ++M + G PD N ++
Sbjct: 373 HGCQPN----SLSYNPLLHGFCKEKKMDRAIEYL-------ERMVSRGCYPDIVTYNTML 421
Query: 221 KAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLR 280
A K +V++A+ + +++ GC P +Y+ + GL + G+ + + EM+ K L+
Sbjct: 422 TALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLK 481
Query: 281 PSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDL 340
P T TY +V L+ + + ++AI+ + P+ +T+ +++ GLC+ R+ D A D
Sbjct: 482 PDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDF 541
Query: 341 LDECKKRDISMSEKMYKTLLDDLHY 365
L R +E Y L++ L Y
Sbjct: 542 LVFMINRGCKPNETSYTILIEGLAY 566
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 131/293 (44%), Gaps = 31/293 (10%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
+ Y TI++ L + +QA +++ ++ C + Y +I C R A + +
Sbjct: 205 VTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATC-RDSGVGHAMKLLD 263
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRS------------------- 199
+M R C PD+ TY +L N + + +L +L+ + S
Sbjct: 264 EM-RDRGCTPDVVTYNVLVNGICKE-GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321
Query: 200 ---------LTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYS 250
L M G P N++I + + AI + +M +GC+PN+ S
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381
Query: 251 YSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDML 310
Y+ + G C++ ++++ + + + M + P TY ++ +L D + EDA+E+L +
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS 441
Query: 311 GNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
SP +TY TV++GL + + +A LLDE + +D+ Y +L+ L
Sbjct: 442 SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 123/262 (46%), Gaps = 23/262 (8%)
Query: 111 GRRYQQAETLVEEVIAGACDGSIP---LYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCK 167
G+ + A+ L E++ G+ G++P YN +I C + + A V ++M S
Sbjct: 151 GKTRKAAKIL--EILEGS--GAVPDVITYNVMISGYC-KAGEINNALSVLDRMSVS---- 201
Query: 168 PDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCL 227
PD+ TY + SL L + +M PD ++I+A +
Sbjct: 202 PDVVTYNTILRSLCDSGK--------LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDS 253
Query: 228 EVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYV 287
V A+++ EM GC P+ +Y+ + G+C++GR+++ + F +M +P+ T+
Sbjct: 254 GVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN 313
Query: 288 IIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKR 347
II+ S+ R+ DA ++L DML SP +T+ ++ LCR+ A D+L++ +
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 348 DISMSEKMYKTLLDDLHYVCRE 369
+ Y L LH C+E
Sbjct: 374 GCQPNSLSYNPL---LHGFCKE 392
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 123/256 (48%), Gaps = 16/256 (6%)
Query: 59 LKPGFTPSDVD-----RALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRR 113
L+ GF+PS V L A+DI Q ++ L+Y ++ ++
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS-LSYNPLLHGFCKEKK 394
Query: 114 YQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETY 173
+A +E +++ C I YN+++ C + A ++ N+ L S+ C P L TY
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALC-KDGKVEDAVEILNQ-LSSKGCSPVLITY 452
Query: 174 TLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAI 233
+ + L + A++ L +M+A + PDT + ++ S+ +VDEAI
Sbjct: 453 NTVIDGLAKAGKT-------GKAIK-LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504
Query: 234 RVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSL 293
+ FHE G PNA +++ I GLC+ + ++ + F M + +P+ ++Y I++ L
Sbjct: 505 KFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGL 564
Query: 294 AMDRRFEDAIEVLFDM 309
A + ++A+E+L ++
Sbjct: 565 AYEGMAKEALELLNEL 580
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 82/187 (43%), Gaps = 10/187 (5%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
+ Y T++ L + + A ++ ++ + C + YN++I + +A + +
Sbjct: 415 VTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL-AKAGKTGKAIKLLD 473
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
+M R++D KPD TY+ L L R K+ + H + + +G+ P+ N
Sbjct: 474 EM-RAKDLKPDTITYSSLVGGLSRE-GKVDEAIKFFH-------EFERMGIRPNAVTFNS 524
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
I+ K + D AI M GC+PN SY+ + GL +G + L E+ K
Sbjct: 525 IMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Query: 279 LRPSTST 285
L +S
Sbjct: 585 LMKKSSA 591
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 155/313 (49%), Gaps = 22/313 (7%)
Query: 63 FTPSDVDRALTSVSDPDLALDIFRWTAQQ--RSYNHTDLNYLTIIKQLNAGRRYQQAETL 120
TPS V + + + D + ++ +F + Y H ++ ++ +L + +++ AE L
Sbjct: 14 ITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDL 73
Query: 121 VEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFD---VYNKMLRSEDCKPDLETYTLLY 177
+ + C S + SI R GR R FD V++KM + DC P + Y +
Sbjct: 74 IVRMKIENCVVSEDILLSICR-GYGR---VHRPFDSLRVFHKM-KDFDCDPSQKAYVTVL 128
Query: 178 NSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKC-LEVDEAIRVF 236
++L N+L++ + + K M+ +G+ P LN++IKA + VD +++F
Sbjct: 129 -AILVEENQLNLAFKFY-------KNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIF 180
Query: 237 HEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMD 296
EM GC+P++Y+Y + GLC GR+++ + EM EK P+ TY ++ L
Sbjct: 181 LEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGS 240
Query: 297 RRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMY 356
+ ++A+ L +M P+ TY ++++GLC++ R+ +A +L + R + Y
Sbjct: 241 KNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTY 300
Query: 357 KTLLDDLHYVCRE 369
TL+ L C+E
Sbjct: 301 TTLITGL---CKE 310
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 9/212 (4%)
Query: 132 SIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCY 191
++ N +I+ C ++ +M + C PD TY L + L R +
Sbjct: 155 TVASLNVLIKALCRNDGTVDAGLKIFLEMPK-RGCDPDSYTYGTLISGLCR--------F 205
Query: 192 VYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSY 251
+ + L +M P +I VDEA+R EM G EPN ++Y
Sbjct: 206 GRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTY 265
Query: 252 SYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLG 311
S + GLC+ GR Q + ++ M + RP+ TY ++ L +++ ++A+E+L M
Sbjct: 266 SSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNL 325
Query: 312 NSRSPDHLTYKTVLEGLCRERRADEAFDLLDE 343
PD Y V+ G C + EA + LDE
Sbjct: 326 QGLKPDAGLYGKVISGFCAISKFREAANFLDE 357
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 108/242 (44%), Gaps = 22/242 (9%)
Query: 128 ACDGSIPLYNSIIRFCC--GRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFN 185
CD Y ++I C GR A ++ +M+ +DC P + TYT L N L N
Sbjct: 187 GCDPDSYTYGTLISGLCRFGR---IDEAKKLFTEMVE-KDCAPTVVTYTSLINGLCGSKN 242
Query: 186 KLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCE 245
A+R L ++MK+ G+ P+ F + ++ K +A+ +F M GC
Sbjct: 243 -------VDEAMRYL-EEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCR 294
Query: 246 PNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEV 305
PN +Y+ + GLC++ ++ + + M + L+P Y ++ +F +A
Sbjct: 295 PNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANF 354
Query: 306 LFDMLGNSRSPDHLTYKT-------VLEGLCRERRADEAFDLLDECKKRDISMSEKMYKT 358
L +M+ +P+ LT+ V+ GLC AF L + R IS+ + ++
Sbjct: 355 LDEMILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSRGISVEVETLES 413
Query: 359 LL 360
L+
Sbjct: 414 LV 415
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 120/292 (41%), Gaps = 25/292 (8%)
Query: 79 DLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNS 138
D L IF +R + Y T+I L R +A+ L E++ C ++ Y S
Sbjct: 174 DAGLKIF-LEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTS 232
Query: 139 IIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVR 198
+I CG K + A Y + ++S+ +P++ TY+ L + L + L ++
Sbjct: 233 LINGLCGSKNV-DEAMR-YLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELF----- 285
Query: 199 SLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGL 258
+ M A G P+ +I K ++ EA+ + M L G +P+A Y + G
Sbjct: 286 ---EMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGF 342
Query: 259 CEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIV----------CSLAMDRRFEDAIEVLFD 308
C + + F EM + P+ T+ I V C+ R F +
Sbjct: 343 CAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFT----LYLS 398
Query: 309 MLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
M S + T +++++ LC++ +A L+DE S+ +K L+
Sbjct: 399 MRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 141/326 (43%), Gaps = 45/326 (13%)
Query: 78 PDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYN 137
PD+A F W+ +Q+ Y H Y++++ L + + + E+ ++ N
Sbjct: 132 PDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAAN 191
Query: 138 SIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAV 197
++I+ G+ + V+ KM + +P L TY L N L V +++ +
Sbjct: 192 ALIK-SFGKLGMVEELLWVWRKM-KENGIEPTLYTYNFLMNGL--------VSAMFVDSA 241
Query: 198 RSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEA------------------------- 232
+ + M++ + PD N +IK Y K + +A
Sbjct: 242 ERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQA 301
Query: 233 ----------IRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPS 282
+ ++ EM G + +++S + GLC++G++N+G ++ M K +P+
Sbjct: 302 CYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPN 361
Query: 283 TSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLD 342
+ Y +++ A EDAI +L M+ PD +TY V+ GLC+ R +EA D
Sbjct: 362 VAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFH 421
Query: 343 ECKKRDISMSEKMYKTLLDDLHYVCR 368
C+ ++++ Y +L+D L R
Sbjct: 422 TCRFDGLAINSMFYSSLIDGLGKAGR 447
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 119/272 (43%), Gaps = 13/272 (4%)
Query: 90 QQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFL 149
+ R + + Y+T+I+ A + L +E+ ++ +I C ++
Sbjct: 284 ETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLC-KEGK 342
Query: 150 FSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGV 209
+ + V+ M+R + KP++ YT+L + + + A+R L +M G
Sbjct: 343 LNEGYTVFENMIR-KGSKPNVAIYTVLIDGYAKSGS-------VEDAIR-LLHRMIDEGF 393
Query: 210 IPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLG 269
PD ++++ K V+EA+ FH G N+ YS + GL + GRV++
Sbjct: 394 KPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAER 453
Query: 270 FYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHL--TYKTVLEG 327
++EM EK + Y ++ + R+ ++AI LF + D TY +L G
Sbjct: 454 LFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAI-ALFKRMEEEEGCDQTVYTYTILLSG 512
Query: 328 LCRERRADEAFDLLDECKKRDISMSEKMYKTL 359
+ +E R +EA L D + I+ + ++ L
Sbjct: 513 MFKEHRNEEALKLWDMMIDKGITPTAACFRAL 544
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 109/241 (45%), Gaps = 11/241 (4%)
Query: 104 IIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRS 163
+I L + + T+ E +I ++ +Y +I + A + ++M+
Sbjct: 333 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLID-GYAKSGSVEDAIRLLHRMI-D 390
Query: 164 EDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAY 223
E KPD+ TY+++ N L + ++ Y H R G+ ++ + +I
Sbjct: 391 EGFKPDVVTYSVVVNGLCKN-GRVEEALDYFHTCR-------FDGLAINSMFYSSLIDGL 442
Query: 224 SKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEK-CLRPS 282
K VDEA R+F EM GC ++Y Y+ + + +V++ + +K M+E+ +
Sbjct: 443 GKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQT 502
Query: 283 TSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLD 342
TY I++ + + R E+A+++ M+ +P ++ + GLC + A +LD
Sbjct: 503 VYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILD 562
Query: 343 E 343
E
Sbjct: 563 E 563
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 113/252 (44%), Gaps = 17/252 (6%)
Query: 130 DGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDC--KPDLETYTLLYNSLLRRFNKL 187
DGS + +++ FC RKFL + + + +L+S++ KPD+ ++ +++
Sbjct: 94 DGSASMESNLDGFC--RKFLIKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHN 151
Query: 188 HVCYVYLHAVRSLTKQMKAVGVI---------PDTF-VLNMIIKAYSKCLEVDEAIRVFH 237
CYV L V +L K + + + P T N +IK++ K V+E + V+
Sbjct: 152 LECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWR 211
Query: 238 EMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDR 297
+M G EP Y+Y+++ GL V+ ++ M+ ++P TY ++
Sbjct: 212 KMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAG 271
Query: 298 RFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYK 357
+ + A+E L DM D +TY T+++ + L E ++ I + +
Sbjct: 272 QTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFS 331
Query: 358 TLLDDLHYVCRE 369
++ L C+E
Sbjct: 332 LVIGGL---CKE 340
>AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=575
Length = 575
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 143/319 (44%), Gaps = 81/319 (25%)
Query: 49 EKQFETWVNHLKPGFTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQL 108
E +F+ ++ L P FTP ++ A+T DP L +F W +QQ + H + +Y I++L
Sbjct: 116 ESKFQETISKLPPRFTPEELADAITLEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKL 175
Query: 109 NAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSE--DC 166
A + G+ RA +++ M+ S +C
Sbjct: 176 GAAK-------------------------------SGK---LIRAVNIFRHMVNSRNLEC 201
Query: 167 KPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKC 226
+P + TY +L+ +LL R N + ++Y+ VRSL +QM G+ PD F LN ++K +
Sbjct: 202 RPTMRTYHILFKALLGRGNNSFINHLYMETVRSLFRQMVDSGIEPDVFALNCLVKG--RT 259
Query: 227 LEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTY 286
+ E + EM G PN SY+
Sbjct: 260 INTRE---LLSEMKGKGFVPNGKSYNS--------------------------------- 283
Query: 287 VIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKK 346
+V + A+ +DA++ L++M+ N R D ++Y+T+++ CR+ + DEA LL+ ++
Sbjct: 284 --LVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLRE 341
Query: 347 R---DISMSE--KMYKTLL 360
+ DI + KMY+ ++
Sbjct: 342 KQLVDIDSDDKLKMYQMVI 360
>AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=550
Length = 550
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 143/319 (44%), Gaps = 81/319 (25%)
Query: 49 EKQFETWVNHLKPGFTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQL 108
E +F+ ++ L P FTP ++ A+T DP L +F W +QQ + H + +Y I++L
Sbjct: 91 ESKFQETISKLPPRFTPEELADAITLEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKL 150
Query: 109 NAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSE--DC 166
A + G+ RA +++ M+ S +C
Sbjct: 151 GAAK-------------------------------SGK---LIRAVNIFRHMVNSRNLEC 176
Query: 167 KPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKC 226
+P + TY +L+ +LL R N + ++Y+ VRSL +QM G+ PD F LN ++K +
Sbjct: 177 RPTMRTYHILFKALLGRGNNSFINHLYMETVRSLFRQMVDSGIEPDVFALNCLVKG--RT 234
Query: 227 LEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTY 286
+ E + EM G PN SY+
Sbjct: 235 INTRE---LLSEMKGKGFVPNGKSYNS--------------------------------- 258
Query: 287 VIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKK 346
+V + A+ +DA++ L++M+ N R D ++Y+T+++ CR+ + DEA LL+ ++
Sbjct: 259 --LVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLRE 316
Query: 347 R---DISMSE--KMYKTLL 360
+ DI + KMY+ ++
Sbjct: 317 KQLVDIDSDDKLKMYQMVI 335
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 143/325 (44%), Gaps = 41/325 (12%)
Query: 49 EKQFETWVNHLKPGFTPSDVDRALTSVSDPD-LALDIFRWTAQQRSYNHTDLNYLTIIKQ 107
+ + ET +N +P+ ++ L +S+ LAL +F+W Q+ + HT NY +I+
Sbjct: 78 DSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIES 137
Query: 108 LNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRK-------------FLFSRAF 154
L ++++ +LV+++ A R+ RK F F
Sbjct: 138 LGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMES 197
Query: 155 DVYNKML-------------------RSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLH 195
+N+ML + + +PD+++YT+L + N L V V
Sbjct: 198 SDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEV--- 254
Query: 196 AVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIA 255
++MK G PD +II A+ K + +EAIR F+EM C+P+ + + +
Sbjct: 255 -----NREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLI 309
Query: 256 RGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRS 315
GL + ++N L F++ K TY +V + +R EDA + + +M
Sbjct: 310 NGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVG 369
Query: 316 PDHLTYKTVLEGLCRERRADEAFDL 340
P+ TY +L L R +R+ EA+++
Sbjct: 370 PNARTYDIILHHLIRMQRSKEAYEV 394
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 98/231 (42%), Gaps = 17/231 (7%)
Query: 136 YNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLH 195
Y II C K + A +N+M +CKP + L N L KL+ +
Sbjct: 270 YGIIINAHCKAK-KYEEAIRFFNEM-EQRNCKPSPHIFCSLINGLGSE-KKLNDALEFF- 325
Query: 196 AVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIA 255
++ K+ G + N ++ AY +++A + EM L G PNA +Y I
Sbjct: 326 ------ERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIIL 379
Query: 256 RGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRS 315
L R + Y+ M P+ STY I+V R + AI++ +M G
Sbjct: 380 HHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVL 436
Query: 316 PDHLTYKTVLEGLCRERRADEA----FDLLDECKKRDISMSEKMYKTLLDD 362
P + +++ LC E + DEA ++LD + M ++ +TLLD+
Sbjct: 437 PGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDE 487
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 87/188 (46%), Gaps = 7/188 (3%)
Query: 177 YNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIP-DTFVLNMIIKAYSKCLEVDEAIRV 235
YN+L+ K+ + SL MKA ++ +TF L I + Y++ +V EAI
Sbjct: 131 YNALIESLGKIK----QFKLIWSLVDDMKAKKLLSKETFAL--ISRRYARARKVKEAIGA 184
Query: 236 FHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAM 295
FH+M +G + + ++ + L + V + +MK+K P +Y I++
Sbjct: 185 FHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQ 244
Query: 296 DRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKM 355
+ EV +M PD + Y ++ C+ ++ +EA +E ++R+ S +
Sbjct: 245 ELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHI 304
Query: 356 YKTLLDDL 363
+ +L++ L
Sbjct: 305 FCSLINGL 312
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 105/243 (43%), Gaps = 17/243 (6%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKM 160
Y II ++Y++A E+ C S ++ S+I K L + A + +
Sbjct: 270 YGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKL-NDALEFFE-- 326
Query: 161 LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVY-LHAVRSLTKQMKAVGVIPDTFVLNMI 219
RS+ LE T YN+L+ + C+ + +M+ GV P+ ++I
Sbjct: 327 -RSKSSGFPLEAPT--YNALVGAY-----CWSQRMEDAYKTVDEMRLKGVGPNARTYDII 378
Query: 220 IKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCL 279
+ + EA V+ M CEP +Y + R C K R++ + + EMK K +
Sbjct: 379 LHHLIRMQRSKEAYEVYQTMS---CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGV 435
Query: 280 RPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLG-NSRSPDHLTYKTVLEGLCRERRADEAF 338
P + ++ +L + + ++A E +ML R P H+ + + + L E R D+
Sbjct: 436 LPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHM-FSRLKQTLLDEGRKDKVT 494
Query: 339 DLL 341
DL+
Sbjct: 495 DLV 497
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 145/312 (46%), Gaps = 19/312 (6%)
Query: 57 NHLKPGFTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQ 116
N P +P+ V + + S SDP LA +IF + +QQ ++ H+ ++L +I +L GR +
Sbjct: 43 NPKSPIGSPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYF-- 100
Query: 117 AETLVEEVIAGACDGSIPLYNSIIRFCC---GRKFLFSRAFDVYNKMLRSEDCKPDLETY 173
L+++V+A PL I + L + + KML +
Sbjct: 101 --NLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEF--------NF 150
Query: 174 TLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAI 233
T L R + L YL L K + GV+P+T N++++A+ CL D +I
Sbjct: 151 TPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAF--CLNDDLSI 208
Query: 234 --RVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVC 291
++F +M P+ SY + +G C KG+VN + +M K P +Y ++
Sbjct: 209 AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLN 268
Query: 292 SLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISM 351
SL + +A ++L M +PD + Y T++ G CRE RA +A +LD+ S
Sbjct: 269 SLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSP 328
Query: 352 SEKMYKTLLDDL 363
+ Y+TL+ L
Sbjct: 329 NSVSYRTLIGGL 340
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 108/237 (45%), Gaps = 14/237 (5%)
Query: 114 YQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETY 173
YQ ++E + D Y +I+ C RK + A ++ + ML ++ PD +Y
Sbjct: 210 YQLFGKMLERDVVPDVDS----YKILIQGFC-RKGQVNGAMELLDDML-NKGFVPDRLSY 263
Query: 174 TLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAI 233
T L NSL R+ L L +MK G PD N +I + + +A
Sbjct: 264 TTLLNSLCRK--------TQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDAR 315
Query: 234 RVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSL 293
+V +M GC PN+ SY + GLC++G ++G + +EM K P S +V
Sbjct: 316 KVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGF 375
Query: 294 AMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDIS 350
+ E+A +V+ ++ N + T++ V+ +C E +++ L++ K +I+
Sbjct: 376 CSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEIT 432
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 118/288 (40%), Gaps = 25/288 (8%)
Query: 85 FRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIP---LYNSIIR 141
F +T Q + N I+ L + R Y Q E + G +P YN +++
Sbjct: 148 FNFTPQPKHLNR-------ILDVLVSHRGYLQKA--FELFKSSRLHGVMPNTRSYNLLMQ 198
Query: 142 FCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLT 201
C L S A+ ++ KML D PD+++Y +L R+ ++ L
Sbjct: 199 AFCLNDDL-SIAYQLFGKMLE-RDVVPDVDSYKILIQGFCRKGQ--------VNGAMELL 248
Query: 202 KQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEK 261
M G +PD ++ + + ++ EA ++ M L GC P+ Y+ + G C +
Sbjct: 249 DDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCRE 308
Query: 262 GRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTY 321
R +M P++ +Y ++ L F++ + L +M+ SP
Sbjct: 309 DRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVS 368
Query: 322 KTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCRE 369
+++G C + +EA D+++ K ++ ++ ++ +C E
Sbjct: 369 NCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIP---LICNE 413
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 133/290 (45%), Gaps = 17/290 (5%)
Query: 58 HLKPGFTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQA 117
H + + V + L + P L F W + + ++H + ++ +++ L R A
Sbjct: 61 HPSQTISRTTVLQTLRLIKVPADGLRFFDWVSN-KGFSHKEQSFFLMLEFLGRARNLNVA 119
Query: 118 ETLVEEVIAGACDGSIPL----YNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETY 173
+ I +G + L +NS+IR G LF + ++ M + P + T+
Sbjct: 120 RNFLFS-IERRSNGCVKLQDRYFNSLIR-SYGNAGLFQESVKLFQTM-KQMGISPSVLTF 176
Query: 174 TLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAI 233
L + LL+R + + + +R + GV PD++ N +I + K VDEA
Sbjct: 177 NSLLSILLKR-GRTGMAHDLFDEMR------RTYGVTPDSYTFNTLINGFCKNSMVDEAF 229
Query: 234 RVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC--LRPSTSTYVIIVC 291
R+F +M LY C P+ +Y+ I GLC G+V M +K + P+ +Y +V
Sbjct: 230 RIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVR 289
Query: 292 SLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLL 341
M + ++A+ V DML P+ +TY T+++GL R DE D+L
Sbjct: 290 GYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDIL 339
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 129/278 (46%), Gaps = 26/278 (9%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACD--GSIPLYNSIIRFCCGRKFLFSRAFDV 156
+ Y TII L + + A ++ ++ A D ++ Y +++R C ++ + A V
Sbjct: 245 VTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEI-DEAVLV 303
Query: 157 YNKMLRSEDCKPDLETYTLLYNSLLRRFNKLH----VCYVYLHAVRSLTKQMKAVGVIPD 212
++ ML S KP+ TY N+L++ ++ H + + + + T PD
Sbjct: 304 FHDML-SRGLKPNAVTY----NTLIKGLSEAHRYDEIKDILIGGNDAFTT------FAPD 352
Query: 213 TFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
N++IKA+ +D A++VF EM P++ SYS + R LC + ++ +
Sbjct: 353 ACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFN 412
Query: 273 EMKEKCL-------RPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVL 325
E+ EK + +P + Y + L + + + A E +F L D +YKT++
Sbjct: 413 ELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQA-EKVFRQLMKRGVQDPPSYKTLI 471
Query: 326 EGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
G CRE + A++LL +R+ + Y+ L+D L
Sbjct: 472 TGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGL 509
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 71/148 (47%), Gaps = 3/148 (2%)
Query: 216 LNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMK 275
N +I++Y E++++F M G P+ +++ + L ++GR + EM+
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 276 EK-CLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRA 334
+ P + T+ ++ + ++A + DM +PD +TY T+++GLCR +
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 335 DEAFDLLDECKKR--DISMSEKMYKTLL 360
A ++L K+ D+ + Y TL+
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLV 288
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 151/358 (42%), Gaps = 50/358 (13%)
Query: 48 LEKQFETWVNHLKPGFTPSDVDRALTSV-SDPDLALDIFRWTAQQRSYNHTDLNYLTIIK 106
LEK F+ L P + P R L + DP LA F+W+ + + H+ +Y +
Sbjct: 98 LEKLFDL---TLAPIWVP----RVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAH 150
Query: 107 QLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKF-----LFSRAFDVYNKML 161
L R Y A ++++E++ D + R C F LFS D+ +
Sbjct: 151 ILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDL-GMLE 209
Query: 162 RSEDCKPDLETYTLLY-----NSLLRRFNKLH-------------------VCYVY---- 193
+ C ++ + + N LL RF KL + Y
Sbjct: 210 EAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMI 269
Query: 194 --------LHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCE 245
+ A R L ++MK G++PDT N +I + K +D+ + F EM CE
Sbjct: 270 DCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCE 329
Query: 246 PNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEV 305
P+ +Y+ + C+ G++ GL FY+EMK L+P+ +Y +V + + + AI+
Sbjct: 330 PDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKF 389
Query: 306 LFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
DM P+ TY ++++ C+ +AF L +E + + + Y L+D L
Sbjct: 390 YVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGL 447
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 120/264 (45%), Gaps = 12/264 (4%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIR-FCCGRKFLFSRAFDVY 157
+ Y ++I R EE+ C+ + YN++I FC K F Y
Sbjct: 298 VTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEF--Y 355
Query: 158 NKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLN 217
+M + KP++ +Y+ L ++ + Y+ M+ VG++P+ +
Sbjct: 356 REM-KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYV--------DMRRVGLVPNEYTYT 406
Query: 218 MIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEK 277
+I A K + +A R+ +EM G E N +Y+ + GLC+ R+ + + +M
Sbjct: 407 SLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 466
Query: 278 CLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEA 337
+ P+ ++Y ++ + + A+E+L ++ G PD L Y T + GLC + + A
Sbjct: 467 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 526
Query: 338 FDLLDECKKRDISMSEKMYKTLLD 361
+++E K+ I + +Y TL+D
Sbjct: 527 KVVMNEMKECGIKANSLIYTTLMD 550
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/244 (18%), Positives = 107/244 (43%), Gaps = 13/244 (5%)
Query: 120 LVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNS 179
L E++ + ++ Y ++I C + + A +++ KM + P+L +Y L +
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAERM-KEAEELFGKM-DTAGVIPNLASYNALIHG 481
Query: 180 LLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEM 239
++ N + L ++K G+ PD + I +++ A V +EM
Sbjct: 482 FVKAKN--------MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM 533
Query: 240 GLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRF 299
G + N+ Y+ + + G +GL EMKE + + T+ +++ L ++
Sbjct: 534 KECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLV 593
Query: 300 EDAIEVLFDMLGN--SRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYK 357
A++ F+ + N + + +++GLC++ + + A L ++ ++ + Y
Sbjct: 594 SKAVD-YFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYT 652
Query: 358 TLLD 361
+L+D
Sbjct: 653 SLMD 656
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 22/275 (8%)
Query: 84 IFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSI---------P 134
+F W A ++ H ++L + + L A R+ L+ V A C S P
Sbjct: 99 VFNWAATLDTFRHDHDSFLWMSRSLAATHRFDDLYRLLSFVAANPCPCSSGIFSCPELEP 158
Query: 135 LYNSII-RFCCGRKFLFSR-AFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYV 192
++ S I +C RK ++ AFD +++ D KP++ Y + N ++ +
Sbjct: 159 IFRSAIDAYCRARKMDYALLAFDTMKRLI---DGKPNVGVYNTVVNGYVKSGDMDKALRF 215
Query: 193 YLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYS 252
Y ++M PD N++I Y + + D A+ +F EM GCEPN S++
Sbjct: 216 Y--------QRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFN 267
Query: 253 YIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGN 312
+ RG G++ +G+ EM E R S +T I+V L + R +DA ++ D+L
Sbjct: 268 TLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNK 327
Query: 313 SRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKR 347
P Y +++E LC E +A A ++++E K+
Sbjct: 328 RVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKK 362
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
Query: 220 IKAYSKCLEVDEAIRVFHEMG-LYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
I AY + ++D A+ F M L +PN Y+ + G + G +++ L FY+ M ++
Sbjct: 164 IDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKER 223
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
+P T+ I++ +F+ A+++ +M P+ +++ T++ G + +E
Sbjct: 224 AKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGV 283
Query: 339 DLLDECKKRDISMSEKMYKTLLDDLHYVCRE 369
+ E + SE + L+D L CRE
Sbjct: 284 KMAYEMIELGCRFSEATCEILVDGL---CRE 311
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 114/291 (39%), Gaps = 17/291 (5%)
Query: 76 SDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPL 135
D D AL ++ ++R+ + +I ++ A L E+ C+ ++
Sbjct: 207 GDMDKALRFYQRMGKERAKPDV-CTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVS 265
Query: 136 YNSIIRFCCGRKFLFSRAFDVYNKM---LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYV 192
+N++IR FL S + KM + C+ T +L + L R C +
Sbjct: 266 FNTLIR-----GFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGL 320
Query: 193 YLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYS 252
L L K+ V+P F +++ + A+ + E+ G P + +
Sbjct: 321 VLDL---LNKR-----VLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACT 372
Query: 253 YIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGN 312
+ GL + GR + GF ++M + P + T+ +++ L DA +
Sbjct: 373 TLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSK 432
Query: 313 SRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
PD TY ++ G +E R E L++E +D+ Y L+D L
Sbjct: 433 GYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGL 483
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 141/314 (44%), Gaps = 25/314 (7%)
Query: 62 GFTPSDVDRA-----LTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQ 116
GF P +V L + LALD+FR ++R+ + + Y +I L +
Sbjct: 205 GFQPDEVTYGPVLNRLCKSGNSALALDLFR-KMEERNIKASVVQYSIVIDSLCKDGSFDD 263
Query: 117 AETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLR---SEDCKPDLETY 173
A +L E+ + Y+S+I C +D KMLR + PD+ T+
Sbjct: 264 ALSLFNEMEMKGIKADVVTYSSLIGGLCN-----DGKWDDGAKMLREMIGRNIIPDVVTF 318
Query: 174 TLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAI 233
+ L + ++ L + L +M G+ PDT N +I + K + EA
Sbjct: 319 SALIDVFVKEGKLLEA--------KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370
Query: 234 RVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSL 293
++F M GCEP+ +YS + C+ RV+ G+ ++E+ K L P+T TY +V
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 430
Query: 294 AMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSE 353
+ A E+ +M+ P +TY +L+GLC ++A ++ ++ +K +++
Sbjct: 431 CQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGI 490
Query: 354 KMYKTLLDDLHYVC 367
+Y + +H +C
Sbjct: 491 GIYNII---IHGMC 501
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 117/252 (46%), Gaps = 24/252 (9%)
Query: 116 QAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLF--SRAFDVYNKMLRSEDCKPDLETY 173
+A+ L E+I YNS+I C L ++ FD ++ S+ C+PD+ TY
Sbjct: 333 EAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD----LMVSKGCEPDIVTY 388
Query: 174 TLLYNSLLRRFNKLHVCYVYLHAVR-----SLTKQMKAVGVIPDTFVLNMIIKAYSKCLE 228
++L NS Y A R L +++ + G+IP+T N ++ + + +
Sbjct: 389 SILINS-------------YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 229 VDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVI 288
++ A +F EM G P+ +Y + GLC+ G +N+ L +++M++ + Y I
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Query: 289 IVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRD 348
I+ + + +DA + + PD +TY ++ GLC++ EA L + K+
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Query: 349 ISMSEKMYKTLL 360
+ + Y L+
Sbjct: 556 CTPDDFTYNILI 567
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 11/220 (5%)
Query: 142 FCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLT 201
+C +K LF AF V + + +PD T++ L N + +L
Sbjct: 115 YCRKKKLLF--AFSVLGRAWKL-GYEPDTITFSTLVNGFCLEGR--------VSEAVALV 163
Query: 202 KQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEK 261
+M + PD ++ +I V EA+ + M YG +P+ +Y + LC+
Sbjct: 164 DRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKS 223
Query: 262 GRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTY 321
G L +++M+E+ ++ S Y I++ SL D F+DA+ + +M D +TY
Sbjct: 224 GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283
Query: 322 KTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
+++ GLC + + D+ +L E R+I + L+D
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALID 323
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%)
Query: 197 VRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIAR 256
V K M+ G+ D + + ++I Y + ++ A V G EP+ ++S +
Sbjct: 89 VLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVN 148
Query: 257 GLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSP 316
G C +GRV++ + M E RP T ++ L + R +A+ ++ M+ P
Sbjct: 149 GFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQP 208
Query: 317 DHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
D +TY VL LC+ + A DL + ++R+I S Y ++D L
Sbjct: 209 DEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSL 255
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 103/223 (46%), Gaps = 20/223 (8%)
Query: 151 SRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVI 210
S A + ++M+ + +PDL T + L N L + + L +M G
Sbjct: 157 SEAVALVDRMVEMKQ-RPDLVTVSTLINGLCLKGR--------VSEALVLIDRMVEYGFQ 207
Query: 211 PDTF----VLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQ 266
PD VLN + K+ + L +D +F +M + + YS + LC+ G +
Sbjct: 208 PDEVTYGPVLNRLCKSGNSALALD----LFRKMEERNIKASVVQYSIVIDSLCKDGSFDD 263
Query: 267 GLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLE 326
L + EM+ K ++ TY ++ L D +++D ++L +M+G + PD +T+ +++
Sbjct: 264 ALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALID 323
Query: 327 GLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCRE 369
+E + EA +L +E R I+ Y +L+D C+E
Sbjct: 324 VFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF---CKE 363
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 123/254 (48%), Gaps = 14/254 (5%)
Query: 113 RYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLET 172
+ +A L+EE+ + ++ Y S+I R + Y ML E +E
Sbjct: 602 KVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK----IDRLDEAY--MLFEEAKSKRIEL 655
Query: 173 YTLLYNSLLRRFNKL-HVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDE 231
++Y+SL+ F K+ + YL + +++ G+ P+ + N ++ A K E++E
Sbjct: 656 NVVIYSSLIDGFGKVGRIDEAYL-----ILEELMQKGLTPNLYTWNSLLDALVKAEEINE 710
Query: 232 AIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVC 291
A+ F M C PN +Y + GLC+ + N+ F++EM+++ ++PST +Y ++
Sbjct: 711 ALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMIS 770
Query: 292 SLAMDRRFEDAIEVLFDML-GNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDIS 350
LA +A LFD N PD Y ++EGL RA +AF L +E ++R +
Sbjct: 771 GLAKAGNIAEA-GALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLP 829
Query: 351 MSEKMYKTLLDDLH 364
+ K LLD LH
Sbjct: 830 IHNKTCVVLLDTLH 843
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 138/312 (44%), Gaps = 13/312 (4%)
Query: 53 ETWVNHLKPG-FTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAG 111
E N LKP T + + L + D A+++F + R T Y T+I +
Sbjct: 263 EIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCT-YAYNTMIMGYGSA 321
Query: 112 RRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLE 171
++ +A +L+E A S+ YN I+ C + A V+ +M +D P+L
Sbjct: 322 GKFDEAYSLLERQRAKGSIPSVIAYNCILT-CLRKMGKVDEALKVFEEM--KKDAAPNLS 378
Query: 172 TYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDE 231
TY +L + +L R KL + L M+ G+ P+ +N+++ K ++DE
Sbjct: 379 TYNILID-MLCRAGKLDTAF-------ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDE 430
Query: 232 AIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVC 291
A +F EM C P+ ++ + GL + GRV+ Y++M + R ++ Y ++
Sbjct: 431 ACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIK 490
Query: 292 SLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISM 351
+ R ED ++ DM+ + SPD T ++ + + ++ + +E K R
Sbjct: 491 NFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVP 550
Query: 352 SEKMYKTLLDDL 363
+ Y L+ L
Sbjct: 551 DARSYSILIHGL 562
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 144/313 (46%), Gaps = 17/313 (5%)
Query: 59 LKPGFTP-SDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQA 117
+P F+ + + A ++V+ D+ L +F+ Q+ Y T + T+I+ R A
Sbjct: 164 FRPAFSAYTTLIGAFSAVNHSDMMLTLFQ-QMQELGYEPTVHLFTTLIRGFAKEGRVDSA 222
Query: 118 ETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLY 177
+L++E+ + + D I LYN I G+ A+ +++ + + KPD TYT +
Sbjct: 223 LSLLDEMKSSSLDADIVLYNVCID-SFGKVGKVDMAWKFFHE-IEANGLKPDEVTYTSMI 280
Query: 178 NSLLR--RFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRV 235
L + R ++ + +L R +P T+ N +I Y + DEA +
Sbjct: 281 GVLCKANRLDEAVEMFEHLEKNRR----------VPCTYAYNTMIMGYGSAGKFDEAYSL 330
Query: 236 FHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAM 295
G P+ +Y+ I L + G+V++ L ++EMK K P+ STY I++ L
Sbjct: 331 LERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCR 389
Query: 296 DRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKM 355
+ + A E+ M P+ T +++ LC+ ++ DEA + +E + + E
Sbjct: 390 AGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEIT 449
Query: 356 YKTLLDDLHYVCR 368
+ +L+D L V R
Sbjct: 450 FCSLIDGLGKVGR 462
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 17/220 (7%)
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRS----LTKQMKAVG 208
A+ VY KML S DC+ T +++Y SL++ F + H + + K M
Sbjct: 466 AYKVYEKMLDS-DCR----TNSIVYTSLIKNF--------FNHGRKEDGHKIYKDMINQN 512
Query: 209 VIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGL 268
PD +LN + K E ++ +F E+ P+A SYS + GL + G N+
Sbjct: 513 CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETY 572
Query: 269 GFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGL 328
+ MKE+ T Y I++ + A ++L +M P +TY +V++GL
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Query: 329 CRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCR 368
+ R DEA+ L +E K + I ++ +Y +L+D V R
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGR 672
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 139/331 (41%), Gaps = 40/331 (12%)
Query: 65 PSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEV 124
P V L + D + A++ FRW ++ H +Y +++ + R + + ++ E+
Sbjct: 65 PEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEM 124
Query: 125 IAGACDGSIPLYNSIIRFCCG-----------------RKFLFSRAFDVYNKMLR--SED 165
+ G P N+ I G RKF F AF Y ++ S
Sbjct: 125 ---SVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAV 181
Query: 166 CKPDL-------------ETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPD 212
D+ E L+ +L+R F K + + SL +MK+ + D
Sbjct: 182 NHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEG----RVDSALSLLDEMKSSSLDAD 237
Query: 213 TFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
+ N+ I ++ K +VD A + FHE+ G +P+ +Y+ + LC+ R+++ + ++
Sbjct: 238 IVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFE 297
Query: 273 EMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRER 332
+++ P T Y ++ +F++A +L P + Y +L L +
Sbjct: 298 HLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMG 357
Query: 333 RADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+ DEA + +E KK D + + Y L+D L
Sbjct: 358 KVDEALKVFEEMKK-DAAPNLSTYNILIDML 387
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 127/295 (43%), Gaps = 33/295 (11%)
Query: 98 DLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIR--FCCGRKFLFSRAFD 155
++ + ++I L R A + E+++ C + +Y S+I+ F GRK
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRK---EDGHK 503
Query: 156 VYNKMLRSEDCKPDLETYTLLYNSLL-----------------RRFNKLHVCY-VYLHAV 197
+Y M+ +++C PDL+ + + RRF Y + +H +
Sbjct: 504 IYKDMI-NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL 562
Query: 198 ---------RSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNA 248
L MK G + DT N++I + KC +V++A ++ EM G EP
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622
Query: 249 YSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFD 308
+Y + GL + R+++ ++E K K + + Y ++ R ++A +L +
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682
Query: 309 MLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
++ +P+ T+ ++L+ L + +EA K+ + ++ Y L++ L
Sbjct: 683 LMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 143/324 (44%), Gaps = 29/324 (8%)
Query: 63 FTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVE 122
FT V +A +V++ D AL + R + ++ + Y T+I L+ R +A L+E
Sbjct: 218 FTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVI-YQTLIHSLSKCNRVNEALQLLE 276
Query: 123 EVIAGACDGSIPLYNSIIRFCCGRKF-LFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLL 181
E+ C +N +I C KF + A + N+ML PD TY L N L
Sbjct: 277 EMFLMGCVPDAETFNDVILGLC--KFDRINEAAKMVNRML-IRGFAPDDITYGYLMNGLC 333
Query: 182 RR--------------------FNKL---HVCYVYLHAVRS-LTKQMKAVGVIPDTFVLN 217
+ FN L V + L ++ L+ + + G++PD N
Sbjct: 334 KIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYN 393
Query: 218 MIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEK 277
+I Y K V A+ V H+M GC+PN YSY+ + G C+ G++++ EM
Sbjct: 394 SLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD 453
Query: 278 CLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEA 337
L+P+T + ++ + + R +A+E+ +M PD T+ +++ GLC A
Sbjct: 454 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 513
Query: 338 FDLLDECKKRDISMSEKMYKTLLD 361
LL + + + Y TL++
Sbjct: 514 LWLLRDMISEGVVANTVTYNTLIN 537
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 140/290 (48%), Gaps = 25/290 (8%)
Query: 62 GFTPSDVD-----RALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQ 116
GF P D+ L + D A D+F R + + T+I R
Sbjct: 317 GFAPDDITYGYLMNGLCKIGRVDAAKDLF-----YRIPKPEIVIFNTLIHGFVTHGRLDD 371
Query: 117 AETLVEEVIAGACDGSIP---LYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETY 173
A+ ++ +++ G +P YNS+I + ++ L A +V + M R++ CKP++ +Y
Sbjct: 372 AKAVLSDMVTSY--GIVPDVCTYNSLI-YGYWKEGLVGLALEVLHDM-RNKGCKPNVYSY 427
Query: 174 TLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAI 233
T+L + + K+ Y L+ +M A G+ P+T N +I A+ K + EA+
Sbjct: 428 TILVDGFCK-LGKIDEAYNVLN-------EMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 234 RVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSL 293
+F EM GC+P+ Y+++ + GLCE + L ++M + + +T TY ++ +
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 539
Query: 294 AMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDE 343
++A +++ +M+ D +TY ++++GLCR D+A L ++
Sbjct: 540 LRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEK 589
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 127/293 (43%), Gaps = 21/293 (7%)
Query: 63 FTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVE 122
TP + + L + ++++F WT Q Y H+ Y +I +L A ++ + L+
Sbjct: 76 ITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLI 135
Query: 123 EVIAGACDGSIPLYNSIIR------FCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLL 176
++ L+ SI+R F L +VY+ C+P ++Y ++
Sbjct: 136 QMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYS-------CEPTFKSYNVV 188
Query: 177 YNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVF 236
L+ C+ ++ M + + P F +++KA+ E+D A+ +
Sbjct: 189 LEILVS-----GNCH---KVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLL 240
Query: 237 HEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMD 296
+M +GC PN+ Y + L + RVN+ L +EM P T+ ++ L
Sbjct: 241 RDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKF 300
Query: 297 RRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDI 349
R +A +++ ML +PD +TY ++ GLC+ R D A DL K +I
Sbjct: 301 DRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEI 353
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 121/256 (47%), Gaps = 13/256 (5%)
Query: 113 RYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLET 172
+ +A ++ E+ A + +N +I C ++ A +++ +M R + CKPD+ T
Sbjct: 439 KIDEAYNVLNEMSADGLKPNTVGFNCLISAFC-KEHRIPEAVEIFREMPR-KGCKPDVYT 496
Query: 173 YTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEA 232
+ L + L H + L + M + GV+ +T N +I A+ + E+ EA
Sbjct: 497 FNSLISGLCEVDEIKHALW--------LLRDMISEGVVANTVTYNTLINAFLRRGEIKEA 548
Query: 233 IRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCS 292
++ +EM G + +Y+ + +GLC G V++ +++M PS + I++
Sbjct: 549 RKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILING 608
Query: 293 LAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMS 352
L E+A+E +M+ +PD +T+ +++ GLCR R ++ + + + I
Sbjct: 609 LCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPD 668
Query: 353 EKMYKTLLDDLHYVCR 368
+ TL+ ++C+
Sbjct: 669 TVTFNTLMS---WLCK 681
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 105/251 (41%), Gaps = 10/251 (3%)
Query: 113 RYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLET 172
R +A + E+ C + +NS+I C + A + M+ SE + T
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI-KHALWLLRDMI-SEGVVANTVT 531
Query: 173 YTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEA 232
Y L N+ LRR + R L +M G D N +IK + EVD+A
Sbjct: 532 YNTLINAFLRRGE--------IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKA 583
Query: 233 IRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCS 292
+F +M G P+ S + + GLC G V + + F KEM + P T+ ++
Sbjct: 584 RSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLING 643
Query: 293 LAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMS 352
L R ED + + + PD +T+ T++ LC+ +A LLDE + +
Sbjct: 644 LCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN 703
Query: 353 EKMYKTLLDDL 363
+ + LL +
Sbjct: 704 HRTWSILLQSI 714
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 98/213 (46%), Gaps = 11/213 (5%)
Query: 156 VYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFV 215
V + M+ S PD+ TY NSL+ + K + + L + M+ G P+ +
Sbjct: 375 VLSDMVTSYGIVPDVCTY----NSLIYGYWKEGLVGLALEVLH----DMRNKGCKPNVYS 426
Query: 216 LNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMK 275
+++ + K ++DEA V +EM G +PN ++ + C++ R+ + + ++EM
Sbjct: 427 YTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMP 486
Query: 276 EKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRAD 335
K +P T+ ++ L + A+ +L DM+ + +TY T++ R
Sbjct: 487 RKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK 546
Query: 336 EAFDLLDECKKRDISMSEKMYKTLLDDLHYVCR 368
EA L++E + + E Y +L+ L CR
Sbjct: 547 EARKLVNEMVFQGSPLDEITYNSLIKGL---CR 576
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 124/272 (45%), Gaps = 12/272 (4%)
Query: 68 VDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAG 127
++ L ++D AL F W +Q + H Y T++ L +++ L++E++
Sbjct: 334 ANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRD 393
Query: 128 ACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKL 187
C + YN +I GR + A +V+N+M + CKPD TY L + +
Sbjct: 394 GCQPNTVTYNRLIH-SYGRANYLNEAMNVFNQM-QEAGCKPDRVTYCTLID--------I 443
Query: 188 HVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPN 247
H +L + ++M+A G+ PDTF ++II K + A ++F EM GC PN
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 248 AYSYSYIARGLCEKGRVNQ-GLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVL 306
+Y+ I L K R Q L Y++M+ P TY I++ L E+A V
Sbjct: 504 LVTYN-IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 562
Query: 307 FDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
+M + PD Y +++ + ++A+
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 101/247 (40%), Gaps = 43/247 (17%)
Query: 150 FSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGV 209
+ A + + R K D TYT + +L R A+ L +M G
Sbjct: 344 YGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQ--------FGAINKLLDEMVRDGC 395
Query: 210 IPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLG 269
P+T N +I +Y + ++EA+ VF++M GC+P+ +Y + + G ++ +
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 270 FYKEMKEKCLRPSTSTYVIIVCSLA------------------------------MD--- 296
Y+ M+ L P T TY +I+ L MD
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 297 --RRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEK 354
R +++A+++ DM PD +TY V+E L +EA + E ++++ E
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 355 MYKTLLD 361
+Y L+D
Sbjct: 576 VYGLLVD 582
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 138 SIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAV 197
S+I C G+ A ++ +M+ + C P+L TY ++ + + N Y +A+
Sbjct: 473 SVIINCLGKAGHLPAAHKLFCEMV-DQGCTPNLVTYNIMMDLHAKARN-------YQNAL 524
Query: 198 RSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARG 257
+ L + M+ G PD +++++ C ++EA VF EM P+ Y +
Sbjct: 525 K-LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDL 583
Query: 258 LCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPD 317
+ G V + +Y+ M LRP+ T ++ + + +A E+L +ML P
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPS 643
Query: 318 HLTYKTVLEGLCRERRA 334
TY T+L C + R+
Sbjct: 644 LQTY-TLLLSCCTDGRS 659
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 124/272 (45%), Gaps = 12/272 (4%)
Query: 68 VDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAG 127
++ L ++D AL F W +Q + H Y T++ L +++ L++E++
Sbjct: 334 ANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRD 393
Query: 128 ACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKL 187
C + YN +I GR + A +V+N+M + CKPD TY L + +
Sbjct: 394 GCQPNTVTYNRLIH-SYGRANYLNEAMNVFNQM-QEAGCKPDRVTYCTLID--------I 443
Query: 188 HVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPN 247
H +L + ++M+A G+ PDTF ++II K + A ++F EM GC PN
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 248 AYSYSYIARGLCEKGRVNQ-GLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVL 306
+Y+ I L K R Q L Y++M+ P TY I++ L E+A V
Sbjct: 504 LVTYN-IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 562
Query: 307 FDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
+M + PD Y +++ + ++A+
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 101/247 (40%), Gaps = 43/247 (17%)
Query: 150 FSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGV 209
+ A + + R K D TYT + +L R A+ L +M G
Sbjct: 344 YGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQ--------FGAINKLLDEMVRDGC 395
Query: 210 IPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLG 269
P+T N +I +Y + ++EA+ VF++M GC+P+ +Y + + G ++ +
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 270 FYKEMKEKCLRPSTSTYVIIVCSLA------------------------------MD--- 296
Y+ M+ L P T TY +I+ L MD
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 297 --RRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEK 354
R +++A+++ DM PD +TY V+E L +EA + E ++++ E
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 355 MYKTLLD 361
+Y L+D
Sbjct: 576 VYGLLVD 582
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 138 SIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAV 197
S+I C G+ A ++ +M+ + C P+L TY ++ + + N Y +A+
Sbjct: 473 SVIINCLGKAGHLPAAHKLFCEMV-DQGCTPNLVTYNIMMDLHAKARN-------YQNAL 524
Query: 198 RSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARG 257
+ L + M+ G PD +++++ C ++EA VF EM P+ Y +
Sbjct: 525 K-LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDL 583
Query: 258 LCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPD 317
+ G V + +Y+ M LRP+ T ++ + + +A E+L +ML P
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPS 643
Query: 318 HLTYKTVLEGLCRERRA 334
TY T+L C + R+
Sbjct: 644 LQTY-TLLLSCCTDGRS 659
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 124/272 (45%), Gaps = 12/272 (4%)
Query: 68 VDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAG 127
++ L ++D AL F W +Q + H Y T++ L +++ L++E++
Sbjct: 334 ANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRD 393
Query: 128 ACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKL 187
C + YN +I GR + A +V+N+M + CKPD TY L + +
Sbjct: 394 GCQPNTVTYNRLIH-SYGRANYLNEAMNVFNQM-QEAGCKPDRVTYCTLID--------I 443
Query: 188 HVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPN 247
H +L + ++M+A G+ PDTF ++II K + A ++F EM GC PN
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 248 AYSYSYIARGLCEKGRVNQ-GLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVL 306
+Y+ I L K R Q L Y++M+ P TY I++ L E+A V
Sbjct: 504 LVTYN-IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 562
Query: 307 FDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
+M + PD Y +++ + ++A+
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 101/247 (40%), Gaps = 43/247 (17%)
Query: 150 FSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGV 209
+ A + + R K D TYT + +L R A+ L +M G
Sbjct: 344 YGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQ--------FGAINKLLDEMVRDGC 395
Query: 210 IPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLG 269
P+T N +I +Y + ++EA+ VF++M GC+P+ +Y + + G ++ +
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 270 FYKEMKEKCLRPSTSTYVIIVCSLA------------------------------MD--- 296
Y+ M+ L P T TY +I+ L MD
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 297 --RRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEK 354
R +++A+++ DM PD +TY V+E L +EA + E ++++ E
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 355 MYKTLLD 361
+Y L+D
Sbjct: 576 VYGLLVD 582
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 138 SIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAV 197
S+I C G+ A ++ +M+ + C P+L TY ++ + + N Y +A+
Sbjct: 473 SVIINCLGKAGHLPAAHKLFCEMV-DQGCTPNLVTYNIMMDLHAKARN-------YQNAL 524
Query: 198 RSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARG 257
+ L + M+ G PD +++++ C ++EA VF EM P+ Y +
Sbjct: 525 K-LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDL 583
Query: 258 LCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPD 317
+ G V + +Y+ M LRP+ T ++ + + +A E+L +ML P
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPS 643
Query: 318 HLTYKTVLEGLCRERRA 334
TY T+L C + R+
Sbjct: 644 LQTY-TLLLSCCTDGRS 659
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 133/289 (46%), Gaps = 20/289 (6%)
Query: 77 DPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLY 136
D D A +F + ++ Y +I L RR +A L ++ C ++ Y
Sbjct: 268 DLDSAFKVFN-EMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTY 326
Query: 137 NSIIRFCCG--RKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLR--RFNKLHVCYV 192
+I+ CG RK S A ++ +M KP++ TYT+L +SL +F K
Sbjct: 327 TVLIKSLCGSERK---SEALNLVKEM-EETGIKPNIHTYTVLIDSLCSQCKFEK------ 376
Query: 193 YLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYS 252
R L QM G++P+ N +I Y K +++A+ V M PN +Y+
Sbjct: 377 ----ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYN 432
Query: 253 YIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGN 312
+ +G C K V++ +G +M E+ + P TY ++ F+ A +L M
Sbjct: 433 ELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDR 491
Query: 313 SRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
PD TY ++++ LC+ +R +EA DL D +++ ++ + MY L+D
Sbjct: 492 GLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 146/361 (40%), Gaps = 74/361 (20%)
Query: 62 GFTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQL-NAGRRYQQAETL 120
+PS V + DP AL+ W +Q Y H+ +Y +++ L N G Y
Sbjct: 87 AISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNG--YVGVVFK 144
Query: 121 VEEVIAGACDGS--------------------------IPLYNSIIRFCCGRKFLFSRAF 154
+ ++ +CD I YN+++ R L
Sbjct: 145 IRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLN-SLARFGLVDEMK 203
Query: 155 DVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTF 214
VY +ML + C P++ TY + N + N + ++ G+ PD F
Sbjct: 204 QVYMEMLEDKVC-PNIYTYNKMVNGYCKLGN--------VEEANQYVSKIVEAGLDPDFF 254
Query: 215 VLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFY--- 271
+I Y + ++D A +VF+EM L GC N +Y+++ GLC R+++ + +
Sbjct: 255 TYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKM 314
Query: 272 --------------------------------KEMKEKCLRPSTSTYVIIVCSLAMDRRF 299
KEM+E ++P+ TY +++ SL +F
Sbjct: 315 KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKF 374
Query: 300 EDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTL 359
E A E+L ML P+ +TY ++ G C+ ++A D+++ + R +S + + Y L
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNEL 434
Query: 360 L 360
+
Sbjct: 435 I 435
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 10/225 (4%)
Query: 136 YNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLH 195
YNS+I C R F A+ + + ++ PD TYT + +SL + C
Sbjct: 465 YNSLIDGQC-RSGNFDSAYRLLS-LMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC----- 517
Query: 196 AVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIA 255
L ++ GV P+ + +I Y K +VDEA + +M C PN+ +++ +
Sbjct: 518 ---DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 256 RGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRS 315
GLC G++ + ++M + L+P+ ST I++ L D F+ A ML +
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK 634
Query: 316 PDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
PD TY T ++ CRE R +A D++ + ++ +S Y +L+
Sbjct: 635 PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 112/243 (46%), Gaps = 12/243 (4%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKM 160
Y +I L + ++++A L+ +++ ++ YN++I C R + A DV ++
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG-MIEDAVDVV-EL 418
Query: 161 LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMII 220
+ S P+ TY N L++ + C +H + +M V+PD N +I
Sbjct: 419 MESRKLSPNTRTY----NELIKGY-----CKSNVHKAMGVLNKMLERKVLPDVVTYNSLI 469
Query: 221 KAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLR 280
+ D A R+ M G P+ ++Y+ + LC+ RV + + +++K +
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVN 529
Query: 281 PSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDL 340
P+ Y ++ + ++A +L ML + P+ LT+ ++ GLC + + EA L
Sbjct: 530 PNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA-TL 588
Query: 341 LDE 343
L+E
Sbjct: 589 LEE 591
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 118/265 (44%), Gaps = 12/265 (4%)
Query: 79 DLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNS 138
D A+D+F + T Y +IK L R +A LV+E+ +I Y
Sbjct: 305 DEAMDLFVKMKDDECF-PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 139 IIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVR 198
+I C + F +A ++ +ML + P++ TY L N +R +
Sbjct: 364 LIDSLCSQ-CKFEKARELLGQMLE-KGLMPNVITYNALINGYCKRG--------MIEDAV 413
Query: 199 SLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGL 258
+ + M++ + P+T N +IK Y K V +A+ V ++M P+ +Y+ + G
Sbjct: 414 DVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQ 472
Query: 259 CEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDH 318
C G + M ++ L P TY ++ SL +R E+A ++ + +P+
Sbjct: 473 CRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNV 532
Query: 319 LTYKTVLEGLCRERRADEAFDLLDE 343
+ Y +++G C+ + DEA +L++
Sbjct: 533 VMYTALIDGYCKAGKVDEAHLMLEK 557
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 127/317 (40%), Gaps = 66/317 (20%)
Query: 81 ALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSII 140
A D+F + +Q+ N + Y +I + +A ++E++++ C + +N++I
Sbjct: 516 ACDLFD-SLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 141 RFCCGRKFL----------------------------------FSRAFDVYNKMLRSEDC 166
C L F A+ + +ML S
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML-SSGT 633
Query: 167 KPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKC 226
KPD TYT + R L + +M+ GV PD F + +IK Y
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDA--------EDMMAKMRENGVSPDLFTYSSLIKGYGDL 685
Query: 227 LEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTY 286
+ + A V M GCEP+ +++ + + L E K K+K P
Sbjct: 686 GQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE----------MKYGKQKGSEPE---- 731
Query: 287 VIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRE---RRADEAFDLLDE 343
+C+++ F+ +E+L M+ +S +P+ +Y+ ++ G+C R A++ FD +
Sbjct: 732 ---LCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQ- 787
Query: 344 CKKRDISMSEKMYKTLL 360
+ IS SE ++ LL
Sbjct: 788 -RNEGISPSELVFNALL 803
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 138/332 (41%), Gaps = 48/332 (14%)
Query: 70 RALTSVSDPDLALDI----FRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVI 125
R + S+ + D+ +++ F+W ++R++ H Y+T+I+ L R Y + ++EV+
Sbjct: 94 RLVRSILEIDVEINVKIQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVV 153
Query: 126 AGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFN 185
P S + GR + S+A V+ + + CKP TY + L++
Sbjct: 154 RNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQA-KGRKCKPTSSTYNSVILMLMQEGQ 212
Query: 186 KLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEM------ 239
V VY T+ PDT + +I +Y K D AIR+F EM
Sbjct: 213 HEKVHEVY-------TEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQ 265
Query: 240 ----------GLY-------------------GCEPNAYSYSYIARGLCEKGRVNQGLGF 270
G+Y GC P Y+Y+ + +GL + GRV++ GF
Sbjct: 266 PTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGF 325
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
YK+M L P ++ L R E+ V +M +P ++Y TV++ L
Sbjct: 326 YKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFE 385
Query: 331 ER-RADEAFDLLDECKKRDISMSEKMYKTLLD 361
+ E D+ K +S SE Y L+D
Sbjct: 386 SKAHVSEVSSWFDKMKADSVSPSEFTYSILID 417
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 127/297 (42%), Gaps = 31/297 (10%)
Query: 100 NYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNK 159
N + I+ ++ R ++ + E+ C ++ YN++I+ K S ++K
Sbjct: 343 NLMNILGKVG---RVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDK 399
Query: 160 MLRSEDCKPDLETYTLLYN----------SLL-------RRFNKLHVCYVYL-------- 194
M +++ P TY++L + +LL + F Y L
Sbjct: 400 M-KADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAK 458
Query: 195 --HAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYS 252
A L K++K + V ++IK + KC ++ EA+ +F+EM G P+ Y+Y+
Sbjct: 459 RYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYN 518
Query: 253 YIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGN 312
+ G+ + G +N+ ++M+E R +++ II+ A AIE+ + +
Sbjct: 519 ALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHS 578
Query: 313 SRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCRE 369
PD +TY T+L +EA ++ E K + Y ++LD + V E
Sbjct: 579 GIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDHE 635
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 107/255 (41%), Gaps = 17/255 (6%)
Query: 113 RYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLET 172
+ ++A L EE+ C ++ Y +I+ G+ A+ Y MLR + PD+
Sbjct: 283 KVEKALDLFEEMKRAGCSPTVYTYTELIK-GLGKAGRVDEAYGFYKDMLR-DGLTPDV-- 338
Query: 173 YTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGV---IPDTFVLNMIIKA-YSKCLE 228
+ N+L+ K+ V LT +G+ P N +IKA +
Sbjct: 339 --VFLNNLMNILGKVG-------RVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAH 389
Query: 229 VDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVI 288
V E F +M P+ ++YS + G C+ RV + L +EM EK P + Y
Sbjct: 390 VSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCS 449
Query: 289 IVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRD 348
++ +L +R+E A E+ ++ N + Y +++ + + EA DL +E K +
Sbjct: 450 LINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQG 509
Query: 349 ISMSEKMYKTLLDDL 363
Y L+ +
Sbjct: 510 SGPDVYAYNALMSGM 524
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 112/267 (41%), Gaps = 10/267 (3%)
Query: 75 VSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIP 134
V + ALD+F ++ + T Y +IK L R +A ++++ +
Sbjct: 281 VGKVEKALDLFE-EMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVV 339
Query: 135 LYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYL 194
N+++ G+ +V+++M C P + +Y + +L +K HV
Sbjct: 340 FLNNLMNIL-GKVGRVEELTNVFSEMGMWR-CTPTVVSYNTVIKALFE--SKAHVS---- 391
Query: 195 HAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYI 254
V S +MKA V P F +++I Y K V++A+ + EM G P +Y +
Sbjct: 392 -EVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSL 450
Query: 255 ARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSR 314
L + R +KE+KE S+ Y +++ + +A+++ +M
Sbjct: 451 INALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGS 510
Query: 315 SPDHLTYKTVLEGLCRERRADEAFDLL 341
PD Y ++ G+ + +EA LL
Sbjct: 511 GPDVYAYNALMSGMVKAGMINEANSLL 537
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 135/282 (47%), Gaps = 31/282 (10%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKM 160
Y ++I L +A L E + ++ LYN++I+ + + A + N+M
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAA-QLANEM 417
Query: 161 LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMII 220
+ P+++T+ +L N L + C + L K M + G PD F N++I
Sbjct: 418 -SEKGLIPEVQTFNILVNGLCKMG-----C---VSDADGLVKVMISKGYFPDIFTFNILI 468
Query: 221 KAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLR 280
YS L+++ A+ + M G +P+ Y+Y+ + GLC+ + + YK M EK
Sbjct: 469 HGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCA 528
Query: 281 PSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDL 340
P+ T+ I++ SL R+ ++A+ +L +M S +PD +T+ T+++G C+ D A+ L
Sbjct: 529 PNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTL 588
Query: 341 LDE---------------------CKKRDISMSEKMYKTLLD 361
+ +K +++M+EK+++ ++D
Sbjct: 589 FRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVD 630
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 122/302 (40%), Gaps = 53/302 (17%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCC--GRKFLFSRAFD- 155
+ Y +I L ++Q+AE + +++ + YN++I C G L R
Sbjct: 287 ITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGD 346
Query: 156 -VYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTF 214
V+N + PD TY L + L + +L + G+ P+
Sbjct: 347 AVFNGFV------PDQFTYRSLIDGLCHEGET--------NRALALFNEALGKGIKPNVI 392
Query: 215 VLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEM 274
+ N +IK S + EA ++ +EM G P +++ + GLC+ G V+ G K M
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Query: 275 KEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEG------- 327
K P T+ I++ + + E+A+E+L ML N PD TY ++L G
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKF 512
Query: 328 ----------------------------LCRERRADEAFDLLDECKKRDISMSEKMYKTL 359
LCR R+ DEA LL+E K + ++ + TL
Sbjct: 513 EDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTL 572
Query: 360 LD 361
+D
Sbjct: 573 ID 574
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 125/290 (43%), Gaps = 30/290 (10%)
Query: 77 DPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLY 136
D + D++ +T + +S+ T R A L+ + + C+ ++ Y
Sbjct: 139 DRGITPDVYSFTIRMKSFCKTS--------------RPHAALRLLNNMSSQGCEMNVVAY 184
Query: 137 NSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHA 196
+++ F + ++++ KML S + L FNKL
Sbjct: 185 CTVVGGFYEENFK-AEGYELFGKMLASG------------VSLCLSTFNKLLRVLCKKGD 231
Query: 197 VRSLTKQMKAV---GVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSY 253
V+ K + V GV+P+ F N+ I+ + E+D A+R+ + G +P+ +Y+
Sbjct: 232 VKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNN 291
Query: 254 IARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNS 313
+ GLC+ + + + +M + L P + TY ++ + A ++ D + N
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351
Query: 314 RSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
PD TY+++++GLC E + A L +E + I + +Y TL+ L
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 131/305 (42%), Gaps = 33/305 (10%)
Query: 59 LKPGFTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAE 118
+ P P V + DP AL++F ++ + HT Y ++I++L +++ E
Sbjct: 1 MGPPLLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAME 60
Query: 119 TLV--------EEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDL 170
++ ++ G G++ Y GRK A +V+ +M DC+P +
Sbjct: 61 EVLVDMRENVGNHMLEGVYVGAMKNY--------GRKGKVQEAVNVFERM-DFYDCEPTV 111
Query: 171 ETYTLLYNSLLRR--FNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLE 228
+Y + + L+ F++ H Y+ +M+ G+ PD + + +K++ K
Sbjct: 112 FSYNAIMSVLVDSGYFDQAHKVYM----------RMRDRGITPDVYSFTIRMKSFCKTSR 161
Query: 229 VDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVI 288
A+R+ + M GCE N +Y + G E+ +G + +M + ST+
Sbjct: 162 PHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNK 221
Query: 289 IVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFD----LLDEC 344
++ L ++ ++L ++ P+ TY ++GLC+ D A L+++
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281
Query: 345 KKRDI 349
K D+
Sbjct: 282 PKPDV 286
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 115/293 (39%), Gaps = 25/293 (8%)
Query: 50 KQFETWVNHLKPGFTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLN 109
+ F VN L SD D + + DIF + Y+ QL
Sbjct: 427 QTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYS----------TQL- 475
Query: 110 AGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPD 169
+ + A +++ ++ D + YNS++ C + F + Y M+ + C P+
Sbjct: 476 ---KMENALEILDVMLDNGVDPDVYTYNSLLNGLC-KTSKFEDVMETYKTMVE-KGCAPN 530
Query: 170 LETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEV 229
L T+ +L SL R Y L L ++MK V PD +I + K ++
Sbjct: 531 LFTFNILLESLCR--------YRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDL 582
Query: 230 DEAIRVFHEMG-LYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVI 288
D A +F +M Y + +Y+ I EK V ++EM ++CL P TY +
Sbjct: 583 DGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRL 642
Query: 289 IVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLL 341
+V + L +M+ N P T V+ LC E R EA ++
Sbjct: 643 MVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGII 695
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%)
Query: 220 IKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCL 279
+K Y + +V EA+ VF M Y CEP +SY+ I L + G +Q Y M+++ +
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
Query: 280 RPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFD 339
P ++ I + S R A+ +L +M + + Y TV+ G E E ++
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 340 LLDECKKRDISMSEKMYKTLL 360
L + +S+ + LL
Sbjct: 203 LFGKMLASGVSLCLSTFNKLL 223
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 126/266 (47%), Gaps = 11/266 (4%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
+ Y +I L A L+ ++ G + + +YN+II C K + AFD++N
Sbjct: 216 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHM-DDAFDLFN 274
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
KM ++ KPD+ TY L + L Y L M + PD N
Sbjct: 275 KM-ETKGIKPDVFTYNPLISCLCN--------YGRWSDASRLLSDMLEKNINPDLVFFNA 325
Query: 219 IIKAYSKCLEVDEAIRVFHEM-GLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEK 277
+I A+ K ++ EA +++ EM C P+ +Y+ + +G C+ RV +G+ ++EM ++
Sbjct: 326 LIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQR 385
Query: 278 CLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEA 337
L +T TY ++ R ++A V M+ + PD +TY +L+GLC + A
Sbjct: 386 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETA 445
Query: 338 FDLLDECKKRDISMSEKMYKTLLDDL 363
+ + +KRD+ + Y T+++ L
Sbjct: 446 LVVFEYMQKRDMKLDIVTYTTMIEAL 471
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 131/283 (46%), Gaps = 12/283 (4%)
Query: 79 DLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNS 138
D A D+F + + Y +I L R+ A L+ +++ + + +N+
Sbjct: 267 DDAFDLFN-KMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNA 325
Query: 139 II-RFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAV 197
+I F K + A +Y++M++S+ C PD+ + YN+L++ F K Y +
Sbjct: 326 LIDAFVKEGKLV--EAEKLYDEMVKSKHCFPDV----VAYNTLIKGFCK----YKRVEEG 375
Query: 198 RSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARG 257
+ ++M G++ +T +I + + + D A VF +M G P+ +Y+ + G
Sbjct: 376 MEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDG 435
Query: 258 LCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPD 317
LC G V L ++ M+++ ++ TY ++ +L + ED ++ + P+
Sbjct: 436 LCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPN 495
Query: 318 HLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
+TY T++ G CR+ +EA L E K+ + Y TL+
Sbjct: 496 VVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 101/211 (47%), Gaps = 9/211 (4%)
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPD 212
A ++ M++S +E LL S + + NK + V SL +QM+ +G+ +
Sbjct: 59 AIGLFGDMVKSRPFPSIVEFSKLL--SAIAKMNKFDL-------VISLGEQMQNLGISHN 109
Query: 213 TFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
+ ++ I + + ++ A+ + +M G P+ + + + G C R+++ +
Sbjct: 110 LYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 169
Query: 273 EMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRER 332
+M E +P T T+ +V L + +A+ ++ M+ PD +TY V+ GLC+
Sbjct: 170 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 229
Query: 333 RADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
D A +LL++ +K I +Y T++D L
Sbjct: 230 EPDLALNLLNKMEKGKIEADVVIYNTIIDGL 260
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 114/261 (43%), Gaps = 15/261 (5%)
Query: 102 LTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKML 161
L+ I ++N ++ +L E++ ++ Y+ I + C R+ S A + KM+
Sbjct: 82 LSAIAKMN---KFDLVISLGEQMQNLGISHNLYTYSIFINYFC-RRSQLSLALAILGKMM 137
Query: 162 RSEDCKPDLETYTLLYNSLLRRFNKLHVCYVY-LHAVRSLTKQMKAVGVIPDTFVLNMII 220
+ P + T NSLL F C+ + +L QM +G PDT ++
Sbjct: 138 KL-GYGPSIVTL----NSLLNGF-----CHGNRISEAVALVDQMVEMGYQPDTVTFTTLV 187
Query: 221 KAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLR 280
+ + EA+ + M + GC+P+ +Y + GLC++G + L +M++ +
Sbjct: 188 HGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE 247
Query: 281 PSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDL 340
Y I+ L + +DA ++ M PD TY ++ LC R +A L
Sbjct: 248 ADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRL 307
Query: 341 LDECKKRDISMSEKMYKTLLD 361
L + +++I+ + L+D
Sbjct: 308 LSDMLEKNINPDLVFFNALID 328
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 12/216 (5%)
Query: 132 SIPLYNSIIR-FCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVC 190
SI NS++ FC G + S A + ++M+ +PD T+T L + L + NK
Sbjct: 144 SIVTLNSLLNGFCHGNRI--SEAVALVDQMVEM-GYQPDTVTFTTLVHGLFQH-NKAS-- 197
Query: 191 YVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYS 250
AV +L ++M G PD +I K E D A+ + ++M E +
Sbjct: 198 ----EAV-ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 251 YSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDML 310
Y+ I GLC+ ++ + +M+ K ++P TY ++ L R+ DA +L DML
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 311 GNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKK 346
+ +PD + + +++ +E + EA L DE K
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 13/223 (5%)
Query: 116 QAETLVEEVIAGA-CDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYT 174
+AE L +E++ C + YN++I+ C K + +V+ +M + L T
Sbjct: 338 EAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV-EEGMEVFREM-----SQRGLVGNT 391
Query: 175 LLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIR 234
+ Y +L+ F + C + + KQM + GV PD N+++ V+ A+
Sbjct: 392 VTYTTLIHGFFQARDC----DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALV 447
Query: 235 VFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLA 294
VF M + + +Y+ + LC+ G+V G + + K ++P+ TY ++
Sbjct: 448 VFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507
Query: 295 MDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEA 337
E+A + +M + P+ TY T++ R R DEA
Sbjct: 508 RKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA--RLRDGDEA 548
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 105/242 (43%), Gaps = 19/242 (7%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFD----V 156
Y T+IK +R ++ + E+ G+ Y ++I F +R D V
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH-----GFFQARDCDNAQMV 413
Query: 157 YNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVL 216
+ +M+ S+ PD+ TY +L + L N V+ + + + MK D
Sbjct: 414 FKQMV-SDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQK---RDMKL-----DIVTY 464
Query: 217 NMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKE 276
+I+A K +V++ +F + L G +PN +Y+ + G C KG + + EMKE
Sbjct: 465 TTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKE 524
Query: 277 KCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADE 336
P++ TY ++ + D + E++ +M + D T+ V L + R D+
Sbjct: 525 DGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML-HDGRLDK 583
Query: 337 AF 338
+F
Sbjct: 584 SF 585
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 10/283 (3%)
Query: 81 ALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSII 140
AL +F +++ + ++Y +I L R ++A L +++ C S Y +I
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308
Query: 141 RFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSL 200
+ C R L +AF+++++M+ CKP++ TYT+L + L R + +
Sbjct: 309 KALCDRG-LIDKAFNLFDEMI-PRGCKPNVHTYTVLIDGLCRDGK--------IEEANGV 358
Query: 201 TKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCE 260
++M + P N +I Y K V A + M C+PN +++ + GLC
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 261 KGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLT 320
G+ + + K M + L P +Y +++ L + A ++L M PD LT
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLT 478
Query: 321 YKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+ ++ C++ +AD A L ++ IS+ E TL+D +
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGV 521
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 123/274 (44%), Gaps = 18/274 (6%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEV--IAGACDGSIPLYNSIIRFCCGRKFLFSRAFDV 156
++Y TI+ L + AE + ++ I D I + ++ FC R A V
Sbjct: 196 IDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIG-TSLLLGFC--RGLNLRDALKV 252
Query: 157 YNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYV-YLHAVRSLTKQMKAVGVIPDTFV 215
++ M + C P+ +Y++L + L C V L L QM G P T
Sbjct: 253 FDVMSKEVTCAPNSVSYSILIHGL---------CEVGRLEEAFGLKDQMGEKGCQPSTRT 303
Query: 216 LNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMK 275
++IKA +D+A +F EM GC+PN ++Y+ + GLC G++ + G ++M
Sbjct: 304 YTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMV 363
Query: 276 EKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRAD 335
+ + PS TY ++ D R A E+L M + P+ T+ ++EGLCR +
Sbjct: 364 KDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPY 423
Query: 336 EAFDLLDECKKRDISMSEKMYKTLLDDLHYVCRE 369
+A LL +S Y L+D L CRE
Sbjct: 424 KAVHLLKRMLDNGLSPDIVSYNVLIDGL---CRE 454
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 140/347 (40%), Gaps = 62/347 (17%)
Query: 51 QFETWVNHLKPGFTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNA 110
++ V+H+ P + SD D+ + F W + SY ++K + +
Sbjct: 59 SLKSLVSHMNPNVASQVIS---LQRSDNDICVRFFMWVCKHSSYCFDPTQKNQLLKLIVS 115
Query: 111 GRRYQQAETLVEEVIAGACDGSIPLYNSIIRFC--CGRKFL-FSRAFDVYNKMLRSEDCK 167
Y+ A ++ ++I+ C C ++ L FD ++
Sbjct: 116 SGLYRVAHAVIV---------------ALIKECSRCEKEMLKLMYCFDELREVFGFRLNY 160
Query: 168 PDLETYTLLYNSLLRRFNKLHVCYV-------------------------------YLHA 196
P Y+SLL KL + ++ Y A
Sbjct: 161 P-------CYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEA 213
Query: 197 VRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGL-YGCEPNAYSYSYIA 255
++ +G + D+ + ++ + + L + +A++VF M C PN+ SYS +
Sbjct: 214 AEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILI 273
Query: 256 RGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFD-MLGNSR 314
GLCE GR+ + G +M EK +PST TY +++ +L DR D LFD M+
Sbjct: 274 HGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALC-DRGLIDKAFNLFDEMIPRGC 332
Query: 315 SPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
P+ TY +++GLCR+ + +EA + + K I S Y L++
Sbjct: 333 KPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALIN 379
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 72/155 (46%), Gaps = 3/155 (1%)
Query: 199 SLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGL 258
++ ++ +G++P ++ + ++ + R+ M L GC PN Y Y+ I GL
Sbjct: 567 AMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGL 626
Query: 259 CEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDH 318
C+ GRV + M++ + P+ TY ++V + + + A+E + M+ +
Sbjct: 627 CQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELND 686
Query: 319 LTYKTVLEGLCRERRADEAFDLLDECKKRDISMSE 353
Y ++L+G ++ D +E DI++ E
Sbjct: 687 RIYSSLLQGFVLSQK---GIDNSEESTVSDIALRE 718
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 71/145 (48%)
Query: 216 LNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMK 275
LN+I+ SK +V E + + ++ G P+ +Y+ + GL G + + MK
Sbjct: 549 LNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMK 608
Query: 276 EKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRAD 335
P+ Y II+ L R E+A ++L M + SP+H+TY +++G + D
Sbjct: 609 LSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLD 668
Query: 336 EAFDLLDECKKRDISMSEKMYKTLL 360
A + + +R +++++Y +LL
Sbjct: 669 RALETVRAMVERGYELNDRIYSSLL 693
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 150/349 (42%), Gaps = 50/349 (14%)
Query: 51 QFETWVNHLKPGFTPS--DVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQL 108
+ ET ++ L+ F P+ + ++L V + D AL +FRW +Q Y +D Y+ + L
Sbjct: 158 ELETQLDKLQ--FVPNMVHITQSLKIVKEVDAALSLFRWAKKQPWYLPSDECYVVLFDGL 215
Query: 109 NAGRRYQQAETLVEEVIAGAC---DGSIPLYNSIIR-----------FCCGRK------- 147
N GR + ++L EE++ + D S YN +I+ FCC +K
Sbjct: 216 NQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCK 275
Query: 148 ----------FLF------SRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCY 191
LF +AF++Y M ++ D D TY L+ SL +
Sbjct: 276 IDTQTYNNLMMLFLNKGLPYKAFEIYESMEKT-DSLLDGSTYELIIPSLAKSGR------ 328
Query: 192 VYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSY 251
L A L +QMK + P V + ++ + K +D +++V+ EM +G P+A +
Sbjct: 329 --LDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMF 386
Query: 252 SYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLG 311
+ + G+++ L + EMK+ RP+ Y +I+ S A + E A+ V DM
Sbjct: 387 VSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEK 446
Query: 312 NSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
P TY +LE + D A + + + Y +LL
Sbjct: 447 AGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLL 495
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%)
Query: 200 LTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLC 259
L +MK G P+ + MII++++K +++ A+ VF +M G P +YS +
Sbjct: 405 LWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHA 464
Query: 260 EKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPD 317
G+V+ + Y M LRP S+Y+ ++ LA R + A ++L +M S D
Sbjct: 465 GSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVD 522
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 139/281 (49%), Gaps = 15/281 (5%)
Query: 67 DVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIA 126
DV + L S LAL F+ A + HT L + +I++L + + L++++
Sbjct: 45 DVVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKL 104
Query: 127 GACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNK 186
S L+ S+I + L RA +++ + ++ C P ++ Y + ++LL N+
Sbjct: 105 QGFHCSEDLFISVISV-YRQVGLAERAVEMFYR-IKEFGCDPSVKIYNHVLDTLLGE-NR 161
Query: 187 LHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEP 246
+ + Y+ + + MK G P+ F N+++KA K +VD A ++ EM GC P
Sbjct: 162 IQMIYM-------VYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCP 214
Query: 247 NAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVL 306
+A SY+ + +CE G V +G +E+ E+ P S Y ++ L + ++ A E++
Sbjct: 215 DAVSYTTVISSMCEVGLVKEG----RELAER-FEPVVSVYNALINGLCKEHDYKGAFELM 269
Query: 307 FDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKR 347
+M+ SP+ ++Y T++ LC + + AF L + KR
Sbjct: 270 REMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKR 310
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 10/263 (3%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
++Y T+I L + + A + + +++ C +I +S+++ C R F A D++N
Sbjct: 282 ISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFD-ALDLWN 340
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
+M+R +P++ Y L N + V+ H M+ +G P+
Sbjct: 341 QMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSH--------MEEIGCSPNIRTYGS 392
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
+I ++K +D A+ ++++M GC PN Y+ + LC + + + M ++
Sbjct: 393 LINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKEN 452
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHL-TYKTVLEGLCRERRADEA 337
PS T+ + L R + A +V M R P ++ TY +L+GL + R +EA
Sbjct: 453 CAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEA 512
Query: 338 FDLLDECKKRDISMSEKMYKTLL 360
+ L E R + S Y TLL
Sbjct: 513 YGLTREIFMRGVEWSSSTYNTLL 535
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 122/266 (45%), Gaps = 16/266 (6%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
++Y T+I + ++ L E + + +YN++I C ++ + AF++
Sbjct: 217 VSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYNALINGLC-KEHDYKGAFELMR 270
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
+M+ + P++ +Y+ L N L ++ + + +L QM G P+ + L+
Sbjct: 271 EMVE-KGISPNVISYSTLINVLCNS-GQIELAFSFL-------TQMLKRGCHPNIYTLSS 321
Query: 219 IIKAYSKCLEVDEAIRVFHEM-GLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEK 277
++K +A+ ++++M +G +PN +Y+ + +G C G + + + + M+E
Sbjct: 322 LVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEI 381
Query: 278 CLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEA 337
P+ TY ++ A + A+ + ML + P+ + Y ++E LCR + EA
Sbjct: 382 GCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEA 441
Query: 338 FDLLDECKKRDISMSEKMYKTLLDDL 363
L++ K + + S + + L
Sbjct: 442 ESLIEIMSKENCAPSVPTFNAFIKGL 467
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 96/231 (41%), Gaps = 42/231 (18%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCC--GRKFLFSRAFDVYN 158
Y +++ L ++++AE+L+E + C S+P +N+ I+ C GR A V+
Sbjct: 425 YTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGR---LDWAEKVFR 481
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCY-----VYLHAVR--------------- 198
+M + C P++ TY L + L + N++ Y +++ V
Sbjct: 482 QMEQQHRCPPNIVTYNELLDGLAKA-NRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCN 540
Query: 199 --------SLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGC-----E 245
L +M G PD +NMII AY K +A R + L C
Sbjct: 541 AGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCK---QGKAERAAQMLDLVSCGRRKWR 597
Query: 246 PNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMD 296
P+ SY+ + GLC G+ + M + PS +T+ +++ +D
Sbjct: 598 PDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFILD 648
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 136/290 (46%), Gaps = 17/290 (5%)
Query: 81 ALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSII 140
AL+ + + Q + + T++ L + A +++ ++ D + YNS+I
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337
Query: 141 RFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSL 200
C + A +V ++M+ + DC P+ TY L ++L + + L
Sbjct: 338 SGLC-KLGEVKEAVEVLDQMI-TRDCSPNTVTYNTLISTLCKENQ--------VEEATEL 387
Query: 201 TKQMKAVGVIPDTFVLNMIIKAYSKCLEVDE--AIRVFHEMGLYGCEPNAYSYSYIARGL 258
+ + + G++PD N +I+ CL + A+ +F EM GCEP+ ++Y+ + L
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGL--CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSL 445
Query: 259 CEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDH 318
C KG++++ L K+M+ S TY ++ + +A E+ +M + S +
Sbjct: 446 CSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNS 505
Query: 319 LTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCR 368
+TY T+++GLC+ RR ++A L+D+ + Y +LL + CR
Sbjct: 506 VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLT---HFCR 552
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 18/207 (8%)
Query: 167 KPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRS---LTKQMKAVGVIPDTFVLNMIIKAY 223
KPD+ T+ +L +L R H +R + + M + G++PD +++ Y
Sbjct: 186 KPDVSTFNVLIKALCRA-----------HQLRPAILMLEDMPSYGLVPDEKTFTTVMQGY 234
Query: 224 SKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEM-KEKCLRPS 282
+ ++D A+R+ +M +GC + S + I G C++GRV L F +EM + P
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 283 TSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLD 342
T+ +V L + AIE++ ML PD TY +V+ GLC+ EA ++LD
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 343 ECKKRDISMSEKMYKTLLDDLHYVCRE 369
+ RD S + Y TL+ L C+E
Sbjct: 355 QMITRDCSPNTVTYNTLISTL---CKE 378
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 123/273 (45%), Gaps = 12/273 (4%)
Query: 92 RSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIR-FCCGRKFLF 150
R + + Y T+I L + ++A L + + + +NS+I+ C R
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV 418
Query: 151 SRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVI 210
A +++ +M RS+ C+PD TY +L +SL + L ++ KQM+ G
Sbjct: 419 --AMELFEEM-RSKGCEPDEFTYNMLIDSLCSKGK--------LDEALNMLKQMELSGCA 467
Query: 211 PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGF 270
N +I + K + EA +F EM ++G N+ +Y+ + GLC+ RV
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
+M + +P TY ++ + A +++ M N PD +TY T++ GLC+
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587
Query: 331 ERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
R + A LL + + I+++ Y ++ L
Sbjct: 588 AGRVEVASKLLRSIQMKGINLTPHAYNPVIQGL 620
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 107/240 (44%), Gaps = 9/240 (3%)
Query: 122 EEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLL 181
E+++ C S N I+ C ++ A + +M + PD T+ L N L
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFC-KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 182 RRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGL 241
+ HV HA+ + ++ G PD + N +I K EV EA+ V +M
Sbjct: 307 KAG---HV----KHAIEIMDVMLQE-GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMIT 358
Query: 242 YGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFED 301
C PN +Y+ + LC++ +V + + + K + P T+ ++ L + R
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV 418
Query: 302 AIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
A+E+ +M PD TY +++ LC + + DEA ++L + + + S Y TL+D
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 109/253 (43%), Gaps = 22/253 (8%)
Query: 98 DLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVY 157
+ Y +I L + + +A +++++ C S+ YN++I C
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA----------- 483
Query: 158 NKMLRSEDCKPDLETY-----TLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPD 212
NK +E+ ++E + ++ YN+L+ K + L QM G PD
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSR----RVEDAAQLMDQMIMEGQKPD 539
Query: 213 TFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
+ N ++ + + ++ +A + M GCEP+ +Y + GLC+ GRV +
Sbjct: 540 KYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLR 599
Query: 273 EMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDML-GNSRSPDHLTYKTVLEGLCRE 331
++ K + + Y ++ L R+ +AI + +ML N PD ++Y+ V GLC
Sbjct: 600 SIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNG 659
Query: 332 RRA-DEAFDLLDE 343
EA D L E
Sbjct: 660 GGPIREAVDFLVE 672
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 114/246 (46%), Gaps = 16/246 (6%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSII-RFCCGRKFLFSRAFDVY 157
+ Y T+I L RR + A L++++I YNS++ FC G +A D+
Sbjct: 506 VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDI--KKAADIV 563
Query: 158 NKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLN 217
M S C+PD+ TY L + L + ++ V L ++ QMK + + P + N
Sbjct: 564 QAM-TSNGCEPDIVTYGTLISGLCKA-GRVEVASKLLRSI-----QMKGINLTPHAY--N 614
Query: 218 MIIKAYSKCLEVDEAIRVFHEMGLYG-CEPNAYSYSYIARGLCE-KGRVNQGLGFYKEMK 275
+I+ + + EAI +F EM P+A SY + RGLC G + + + F E+
Sbjct: 615 PVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELL 674
Query: 276 EKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRAD 335
EK P S+ ++ L E ++++ ++ +R + ++++GL + R+
Sbjct: 675 EKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEV--SMVKGLLKIRKFQ 732
Query: 336 EAFDLL 341
+A L
Sbjct: 733 DALATL 738
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 117/259 (45%), Gaps = 12/259 (4%)
Query: 81 ALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSII 140
AL F W +Q + H Y T++ L +++ + L++E++ C + YN +I
Sbjct: 342 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLI 401
Query: 141 RFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSL 200
GR A +V+N+M + C+PD TY L + +H +L +
Sbjct: 402 H-SYGRANYLKEAMNVFNQM-QEAGCEPDRVTYCTLID--------IHAKAGFLDIAMDM 451
Query: 201 TKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCE 260
++M+ G+ PDTF ++II K + A R+F EM GC PN +++ I L
Sbjct: 452 YQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFN-IMIALHA 510
Query: 261 KGR-VNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHL 319
K R L Y++M+ +P TY I++ L E+A V +M + PD
Sbjct: 511 KARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEP 570
Query: 320 TYKTVLEGLCRERRADEAF 338
Y +++ + D+A+
Sbjct: 571 VYGLLVDLWGKAGNVDKAW 589
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 102/249 (40%), Gaps = 47/249 (18%)
Query: 150 FSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLR--RFNKLHVCYVYLHAVRSLTKQMKAV 207
++ A + + R K D TYT + +L R +F + + L +M
Sbjct: 339 YANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGE----------INKLLDEMVRD 388
Query: 208 GVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQG 267
G P+T N +I +Y + + EA+ VF++M GCEP+ +Y + + G ++
Sbjct: 389 GCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIA 448
Query: 268 LGFYKEMKEKCLRPSTSTYVIIVCSL---------------------------------- 293
+ Y+ M+E L P T TY +I+ L
Sbjct: 449 MDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIAL 508
Query: 294 -AMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMS 352
A R +E A+++ DM PD +TY V+E L +EA + E ++++
Sbjct: 509 HAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPD 568
Query: 353 EKMYKTLLD 361
E +Y L+D
Sbjct: 569 EPVYGLLVD 577
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 130/267 (48%), Gaps = 10/267 (3%)
Query: 81 ALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSII 140
A+ +F + +S N T + +I+ L + ++A L+ + C+ I YN++I
Sbjct: 190 AMKLFDEHLRFQSCNDTK-TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLI 248
Query: 141 RFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSL 200
+ C L ++A +++ + C PD+ TYT S++ + K + SL
Sbjct: 249 QGFCKSNEL-NKASEMFKDVKSGSVCSPDVVTYT----SMISGYCKAG----KMREASSL 299
Query: 201 TKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCE 260
M +G+ P N+++ Y+K E+ A + +M +GC P+ +++ + G C
Sbjct: 300 LDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCR 359
Query: 261 KGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLT 320
G+V+QG ++EM + + P+ TY I++ +L + R A E+L + P
Sbjct: 360 VGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFM 419
Query: 321 YKTVLEGLCRERRADEAFDLLDECKKR 347
Y V++G C+ + +EA +++E +K+
Sbjct: 420 YNPVIDGFCKAGKVNEANVIVEEMEKK 446
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 94/213 (44%), Gaps = 12/213 (5%)
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYV-YLHAVRSLTKQMKAVGVIP 211
A ++++ LR + C D +T+ +L L C V L M G P
Sbjct: 190 AMKLFDEHLRFQSCN-DTKTFNILIRGL---------CGVGKAEKALELLGVMSGFGCEP 239
Query: 212 DTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYG-CEPNAYSYSYIARGLCEKGRVNQGLGF 270
D N +I+ + K E+++A +F ++ C P+ +Y+ + G C+ G++ +
Sbjct: 240 DIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
+M + P+ T+ ++V A A E+ M+ PD +T+ ++++G CR
Sbjct: 300 LDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCR 359
Query: 331 ERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+ + F L +E R + + Y L++ L
Sbjct: 360 VGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 130/267 (48%), Gaps = 10/267 (3%)
Query: 81 ALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSII 140
A+ +F + +S N T + +I+ L + ++A L+ + C+ I YN++I
Sbjct: 190 AMKLFDEHLRFQSCNDTK-TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLI 248
Query: 141 RFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSL 200
+ C L ++A +++ + C PD+ TYT S++ + K + SL
Sbjct: 249 QGFCKSNEL-NKASEMFKDVKSGSVCSPDVVTYT----SMISGYCKAG----KMREASSL 299
Query: 201 TKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCE 260
M +G+ P N+++ Y+K E+ A + +M +GC P+ +++ + G C
Sbjct: 300 LDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCR 359
Query: 261 KGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLT 320
G+V+QG ++EM + + P+ TY I++ +L + R A E+L + P
Sbjct: 360 VGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFM 419
Query: 321 YKTVLEGLCRERRADEAFDLLDECKKR 347
Y V++G C+ + +EA +++E +K+
Sbjct: 420 YNPVIDGFCKAGKVNEANVIVEEMEKK 446
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 94/213 (44%), Gaps = 12/213 (5%)
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYV-YLHAVRSLTKQMKAVGVIP 211
A ++++ LR + C D +T+ +L L C V L M G P
Sbjct: 190 AMKLFDEHLRFQSCN-DTKTFNILIRGL---------CGVGKAEKALELLGVMSGFGCEP 239
Query: 212 DTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYG-CEPNAYSYSYIARGLCEKGRVNQGLGF 270
D N +I+ + K E+++A +F ++ C P+ +Y+ + G C+ G++ +
Sbjct: 240 DIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
+M + P+ T+ ++V A A E+ M+ PD +T+ ++++G CR
Sbjct: 300 LDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCR 359
Query: 331 ERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+ + F L +E R + + Y L++ L
Sbjct: 360 VGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 120/259 (46%), Gaps = 9/259 (3%)
Query: 105 IKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSE 164
++ L R +A+ L++E+ YN +++ C K L ++ ++M
Sbjct: 166 VRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHV-VYEFVDEMRDDF 224
Query: 165 DCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYS 224
D KPDL ++T+L +++ N Y L ++ G PD F+ N I+K +
Sbjct: 225 DVKPDLVSFTILIDNVCNSKNLREAMY--------LVSKLGNAGFKPDCFLYNTIMKGFC 276
Query: 225 KCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTS 284
+ EA+ V+ +M G EP+ +Y+ + GL + GRV + + K M + P T+
Sbjct: 277 TLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTA 336
Query: 285 TYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDEC 344
TY ++ + A+ +L +M +P+ TY T+L GLC+ R D+ +L +
Sbjct: 337 TYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMM 396
Query: 345 KKRDISMSEKMYKTLLDDL 363
K + + Y TL+ L
Sbjct: 397 KSSGVKLESNGYATLVRSL 415
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 99/205 (48%), Gaps = 16/205 (7%)
Query: 135 LYNSIIR-FCCGRKFLFSRAFDVYNKMLRSEDCKPDLETY-TLLYNSLLRRFNKLHVCYV 192
LYN+I++ FC K S A VY KM + E +PD TY TL++ L + ++ +
Sbjct: 267 LYNTIMKGFCTLSKG--SEAVGVYKKM-KEEGVEPDQITYNTLIFG--LSKAGRVEEARM 321
Query: 193 YLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYS 252
YL K M G PDT ++ + E A+ + EM GC PN +Y+
Sbjct: 322 YL-------KTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYN 374
Query: 253 YIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGN 312
+ GLC+ +++G+ Y+ MK ++ ++ Y +V SL + +A EV FD +
Sbjct: 375 TLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEV-FDYAVD 433
Query: 313 SRS-PDHLTYKTVLEGLCRERRADE 336
S+S D Y T+ L ++A E
Sbjct: 434 SKSLSDASAYSTLETTLKWLKKAKE 458
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 97/255 (38%), Gaps = 40/255 (15%)
Query: 150 FSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGV 209
S A ++N + + DL+ +NS+L+ + + V + + + K
Sbjct: 65 LSDAKSLFNSIAATSRIPLDLK----FHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 210 IPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLG 269
TF++ + + + RV + M G EP+ + R LCE GRV++
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKD 180
Query: 270 FYKEMKEKCLRPSTSTYVIIVCSLA-----------MDRRFED--------AIEVLFDML 310
KE+ EK P T TY ++ L +D +D + +L D +
Sbjct: 181 LMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNV 240
Query: 311 GNSRS-----------------PDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSE 353
NS++ PD Y T+++G C + EA + + K+ + +
Sbjct: 241 CNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQ 300
Query: 354 KMYKTLLDDLHYVCR 368
Y TL+ L R
Sbjct: 301 ITYNTLIFGLSKAGR 315
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 131/314 (41%), Gaps = 37/314 (11%)
Query: 79 DLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNS 138
D L++F Q + + +Y +I RY+ + L++ + SI YN+
Sbjct: 158 DKCLEVFDEMPSQ-GVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNT 216
Query: 139 IIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLL---------------------- 176
+I C + ++ +M R E +PD+ TY L
Sbjct: 217 VINACARGGLDWEGLLGLFAEM-RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMND 275
Query: 177 ---------YNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCL 227
Y+ L+ F KL L V L +M + G +PD N++++AY+K
Sbjct: 276 GGIVPDLTTYSHLVETFGKLR----RLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSG 331
Query: 228 EVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYV 287
+ EA+ VFH+M GC PNA +YS + + GR + + EMK P +TY
Sbjct: 332 SIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYN 391
Query: 288 IIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKR 347
I++ F++ + + DM+ + PD TY+ ++ + ++A +L
Sbjct: 392 ILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAN 451
Query: 348 DISMSEKMYKTLLD 361
DI S K Y +++
Sbjct: 452 DIVPSSKAYTGVIE 465
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 88/196 (44%), Gaps = 11/196 (5%)
Query: 150 FSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGV 209
+ R+ ++ M R CKP+ YT++ SLL R L C + +M + GV
Sbjct: 121 WQRSLRLFKYMQRQIWCKPNEHIYTIMI-SLLGREGLLDKCL-------EVFDEMPSQGV 172
Query: 210 IPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQG-L 268
F +I AY + + ++ + M P+ +Y+ + G +G L
Sbjct: 173 SRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLL 232
Query: 269 GFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSR-SPDHLTYKTVLEG 327
G + EM+ + ++P TY ++ + A+ R D E++F + + PD TY ++E
Sbjct: 233 GLFAEMRHEGIQPDIVTYNTLLSACAI-RGLGDEAEMVFRTMNDGGIVPDLTTYSHLVET 291
Query: 328 LCRERRADEAFDLLDE 343
+ RR ++ DLL E
Sbjct: 292 FGKLRRLEKVCDLLGE 307
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 99/249 (39%), Gaps = 10/249 (4%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKM 160
Y ++ RY L E+ + D YN +I G F +++ M
Sbjct: 355 YSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIE-VFGEGGYFKEVVTLFHDM 413
Query: 161 LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMII 220
+ E+ +PD+ETY + + + LH R + + M A ++P + +I
Sbjct: 414 VE-ENIEPDMETYEGIIFACGK--GGLH------EDARKILQYMTANDIVPSSKAYTGVI 464
Query: 221 KAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLR 280
+A+ + +EA+ F+ M G P+ ++ + G V + + + +
Sbjct: 465 EAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIP 524
Query: 281 PSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDL 340
+ T+ + + +FE+A++ DM + PD T + VL R DE +
Sbjct: 525 RNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQ 584
Query: 341 LDECKKRDI 349
+E K DI
Sbjct: 585 FEEMKASDI 593
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 124/299 (41%), Gaps = 34/299 (11%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKM 160
Y +I+ G +++ TL +++ + + Y II F CG+ L A + M
Sbjct: 390 YNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGII-FACGKGGLHEDARKILQYM 448
Query: 161 LRSEDCKPDLETYT---------LLYNSLLRRFNKLHVC-----------YVYLHAVRSL 200
+ D P + YT LY L FN +H +Y A L
Sbjct: 449 T-ANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGL 507
Query: 201 TKQMKAV------GVIP---DTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSY 251
K+ +A+ IP DTF N I+AY + + +EA++ + +M C+P+ +
Sbjct: 508 VKESEAILSRLVDSGIPRNRDTF--NAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTL 565
Query: 252 SYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLG 311
+ V++ ++EMK + PS Y +++ R++D E+L +ML
Sbjct: 566 EAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLS 625
Query: 312 NSRSPDHLTYKTVLEGLCRERRADEAFD-LLDECKKRDISMSEKMYKTLLDDLHYVCRE 369
N S H +++G + + + +LD+ + + Y LLD L ++ ++
Sbjct: 626 NRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQK 684
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 139/295 (47%), Gaps = 24/295 (8%)
Query: 66 SDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVI 125
SD R L+ + + + D+F ++A +I + +AE L +E++
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSA--------------LIDAFVKEGKLVEAEKLYDEMV 353
Query: 126 AGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFN 185
+ D SI Y+S+I C L A ++ M+ S+ C PD+ TY N+L++ F
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRL-DEAKQMFEFMV-SKHCFPDVVTY----NTLIKGFC 407
Query: 186 KLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCE 245
K Y + + ++M G++ +T N++I+ + + D A +F EM G
Sbjct: 408 K----YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 463
Query: 246 PNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEV 305
PN +Y+ + GLC+ G++ + + ++ ++ + P+ TY I++ + + ED ++
Sbjct: 464 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 306 LFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
++ PD + Y T++ G CR+ +EA L E K+ + Y TL+
Sbjct: 524 FCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 125/271 (46%), Gaps = 10/271 (3%)
Query: 93 SYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSR 152
Y + + T+I L + +A L++ ++A C + Y ++ C R
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT-DL 239
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPD 212
AF++ NKM + + LE L+YN+++ K Y ++ +L K+M+ G+ P+
Sbjct: 240 AFNLLNKMEQGK-----LEPGVLIYNTIIDGLCK----YKHMDDALNLFKEMETKGIRPN 290
Query: 213 TFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
+ +I +A R+ +M P+ +++S + ++G++ + Y
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350
Query: 273 EMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRER 332
EM ++ + PS TY ++ M R ++A ++ M+ PD +TY T+++G C+ +
Sbjct: 351 EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 410
Query: 333 RADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
R +E ++ E +R + + Y L+ L
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGL 441
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 106/211 (50%), Gaps = 9/211 (4%)
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPD 212
A ++ +M++S +E LL S + + NK V V SL +QM+ +G+ +
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLL--SAIAKMNKFDV-------VISLGEQMQNLGIPHN 115
Query: 213 TFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
+ +++I + + ++ A+ V +M G EPN + S + G C R+++ +
Sbjct: 116 HYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVD 175
Query: 273 EMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRER 332
+M +P+T T+ ++ L + + +A+ ++ M+ PD +TY V+ GLC+
Sbjct: 176 QMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235
Query: 333 RADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
D AF+LL++ ++ + +Y T++D L
Sbjct: 236 DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 266
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 136/298 (45%), Gaps = 15/298 (5%)
Query: 68 VDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAG 127
V L D DLA ++ +Q L Y TII L + A L +E+
Sbjct: 227 VVNGLCKRGDTDLAFNLLN-KMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 285
Query: 128 ACDGSIPLYNSIIRFCC--GRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFN 185
++ Y+S+I C GR +S A + + M+ + PD+ T++ L ++ ++
Sbjct: 286 GIRPNVVTYSSLISCLCNYGR---WSDASRLLSDMIERK-INPDVFTFSALIDAFVKEGK 341
Query: 186 KLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCE 245
L L +M + P + +I + +DEA ++F M C
Sbjct: 342 --------LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 393
Query: 246 PNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEV 305
P+ +Y+ + +G C+ RV +G+ ++EM ++ L +T TY I++ L + A E+
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 306 LFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+M+ + P+ +TY T+L+GLC+ + ++A + + ++ + + Y +++ +
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 511
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 109/264 (41%), Gaps = 54/264 (20%)
Query: 138 SIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAV 197
SI+ C R+ A V KM++ +P++ T + L N Y H+
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKL-GYEPNIVTLSSLLNG-------------YCHSK 165
Query: 198 R-----SLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYS 252
R +L QM G P+T N +I + EA+ + M GC+P+ +Y
Sbjct: 166 RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYG 225
Query: 253 YIARGLCEKG----------RVNQG-------------------------LGFYKEMKEK 277
+ GLC++G ++ QG L +KEM+ K
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 285
Query: 278 CLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEA 337
+RP+ TY ++ L R+ DA +L DM+ +PD T+ +++ +E + EA
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 338 FDLLDECKKRDISMSEKMYKTLLD 361
L DE KR I S Y +L++
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLIN 369
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 90/189 (47%), Gaps = 8/189 (4%)
Query: 172 TYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDE 231
TY++L N RR ++L + A+ L K MK +G P+ L+ ++ Y + E
Sbjct: 118 TYSILINCFCRR-SQLPL------ALAVLGKMMK-LGYEPNIVTLSSLLNGYCHSKRISE 169
Query: 232 AIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVC 291
A+ + +M + G +PN +++ + GL + ++ + M K +P TY ++V
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 229
Query: 292 SLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISM 351
L + A +L M P L Y T+++GLC+ + D+A +L E + + I
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 289
Query: 352 SEKMYKTLL 360
+ Y +L+
Sbjct: 290 NVVTYSSLI 298
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 116/264 (43%), Gaps = 20/264 (7%)
Query: 79 DLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNS 138
D A +F + + + + Y T+IK +R ++ + E+ G+ YN
Sbjct: 378 DEAKQMFEFMVSKHCFPDV-VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 139 IIR--FCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLR--RFNKLHVCYVYL 194
+I+ F G A +++ +M+ S+ P++ TY L + L + + K V + YL
Sbjct: 437 LIQGLFQAGD---CDMAQEIFKEMV-SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 195 HAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYI 254
+ + P + N++I+ K +V++ +F + L G +P+ +Y+ +
Sbjct: 493 QRSK----------MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 542
Query: 255 ARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSR 314
G C KG + +KEMKE P++ Y ++ + D E + E++ +M
Sbjct: 543 ISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 602
Query: 315 SPDHLTYKTVLEGLCRERRADEAF 338
+ D T V L + R D++F
Sbjct: 603 AGDASTIGLVTNML-HDGRLDKSF 625
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 146/313 (46%), Gaps = 19/313 (6%)
Query: 62 GFTPS-----DVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQ 116
GF P+ V L D + AL++F + +++ + Y T+I L+ R+
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVF-YCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 117 AETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLL 176
A L+ +++ D ++ + ++I L A ++Y +M+R P++ TY
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE-ARNLYKEMIR-RSVVPNVFTY--- 292
Query: 177 YNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVF 236
NSL+ F +H C L + + M + G PD N +I + K V++ +++F
Sbjct: 293 -NSLINGFC-IHGC---LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLF 347
Query: 237 HEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMD 296
EM G +A++Y+ + G C+ G++N + M + + P TY I++ L +
Sbjct: 348 CEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNN 407
Query: 297 RRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMY 356
+ E A+ ++ D+ + D +TY +++GLCR + EA+ L ++ + Y
Sbjct: 408 GKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAY 467
Query: 357 KTLLDDLHYVCRE 369
T++ L CR+
Sbjct: 468 ITMISGL---CRK 477
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 126/288 (43%), Gaps = 29/288 (10%)
Query: 103 TIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLR 162
+++ G R+Q+A +LV+ + ++ +YN++I C + L + A +V+ M
Sbjct: 154 SLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDL-NNALEVFYCM-E 211
Query: 163 SEDCKPDLETYTLLYNSL----------------LRR--------FNKLHVCYV---YLH 195
+ + D TY L + L ++R F L +V L
Sbjct: 212 KKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLL 271
Query: 196 AVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIA 255
R+L K+M V+P+ F N +I + + +A +F M GC P+ +Y+ +
Sbjct: 272 EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLI 331
Query: 256 RGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRS 315
G C+ RV G+ + EM + L TY ++ + A +V M+ S
Sbjct: 332 TGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVS 391
Query: 316 PDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
PD +TY +L+ LC + ++A ++++ +K ++ + Y ++ L
Sbjct: 392 PDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 439
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 88/193 (45%), Gaps = 8/193 (4%)
Query: 169 DLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLE 228
DL ++T+L + R C A+ L K MK +G P L ++ + +
Sbjct: 113 DLYSFTILIHCFCR-------CSRLSLALALLGKMMK-LGFRPSIVTLGSLLNGFCQGNR 164
Query: 229 VDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVI 288
EA+ + M +G PN Y+ + GLC+ +N L + M++K +R TY
Sbjct: 165 FQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNT 224
Query: 289 IVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRD 348
++ L+ R+ DA +L DM+ P+ + + +++ +E EA +L E +R
Sbjct: 225 LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 284
Query: 349 ISMSEKMYKTLLD 361
+ + Y +L++
Sbjct: 285 VVPNVFTYNSLIN 297
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 5/175 (2%)
Query: 194 LHAVR-----SLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNA 248
LH ++ SL +M IP ++ +K + D I ++H+M G +
Sbjct: 55 LHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDL 114
Query: 249 YSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFD 308
YS++ + C R++ L +M + RPS T ++ RF++A+ ++
Sbjct: 115 YSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDS 174
Query: 309 MLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
M G P+ + Y TV+ GLC+ R + A ++ +K+ I Y TL+ L
Sbjct: 175 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGL 229
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 138/326 (42%), Gaps = 29/326 (8%)
Query: 63 FTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVE 122
+P V + L S +P A +F + Y H+ + Y I+++L+ R +VE
Sbjct: 8 LSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVE 67
Query: 123 EVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLL- 181
+ + C + S+I+ G+ + +A DV+ +M C+P + +Y L N+ +
Sbjct: 68 LIRSQECKCDEDVALSVIK-TYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVE 126
Query: 182 -RRFNKLHVCYVYLHAV-------------------------RSLTKQMKAVGVIPDTFV 215
+++ K+ + Y R M G PD F
Sbjct: 127 AKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFS 186
Query: 216 LNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMK 275
+ +I +K ++D+A+ +F EM G P+ Y+ + G ++ + + +
Sbjct: 187 YSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLL 246
Query: 276 E-KCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRA 334
E + P+ T+ I++ L+ R +D +++ M N R D TY +++ GLC
Sbjct: 247 EDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNV 306
Query: 335 DEAFDLLDECKKRDISMSEKMYKTLL 360
D+A + +E +R S+ Y T+L
Sbjct: 307 DKAESVFNELDERKASIDVVTYNTML 332
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 124/286 (43%), Gaps = 12/286 (4%)
Query: 81 ALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSII 140
+L+++R + S N N L IK L + +A + + A Y I
Sbjct: 344 SLELWRIMEHKNSVNIVSYNIL--IKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFI 401
Query: 141 RFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSL 200
C ++ ++A V + + S D+ Y + + L ++ L +L
Sbjct: 402 HGLCVNGYV-NKALGVMQE-VESSGGHLDVYAYASIIDCLCKKKR--------LEEASNL 451
Query: 201 TKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCE 260
K+M GV ++ V N +I + + EA EMG GC P SY+ + GLC+
Sbjct: 452 VKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCK 511
Query: 261 KGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLT 320
G+ + F KEM E +P TY I++C L DR+ + A+E+ L + D +
Sbjct: 512 AGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMM 571
Query: 321 YKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYV 366
+ ++ GLC + D+A ++ + R+ + + Y TL++ V
Sbjct: 572 HNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKV 617
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 135/305 (44%), Gaps = 37/305 (12%)
Query: 67 DVDRALTSV------SDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETL 120
D D AL+ + S PD ALD+F+ + +Y T++ +++ + E+L
Sbjct: 77 DEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESL 136
Query: 121 VEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSL 180
++ YN +I+ C +K F +A + M + E KPD+ +Y+ + N L
Sbjct: 137 FAYFETAGVAPNLQTYNVLIKMSCKKK-EFEKARGFLDWMWK-EGFKPDVFSYSTVINDL 194
Query: 181 ---------LRRFNKLH--------VCYVYL-----------HAVRSLTKQMKAVGVIPD 212
L F+++ CY L A+ + ++ V P+
Sbjct: 195 AKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPN 254
Query: 213 TFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
N++I SKC VD+ ++++ M E + Y+YS + GLC+ G V++ +
Sbjct: 255 VKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFN 314
Query: 273 EMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRER 332
E+ E+ TY ++ + ++++E L+ ++ + S + ++Y +++GL
Sbjct: 315 ELDERKASIDVVTYNTMLGGFCRCGKIKESLE-LWRIMEHKNSVNIVSYNILIKGLLENG 373
Query: 333 RADEA 337
+ DEA
Sbjct: 374 KIDEA 378
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 92/216 (42%), Gaps = 16/216 (7%)
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSL--TKQMKAVGVIP----- 211
K+L+SE + L++S R H VY H +R L T+ + V I
Sbjct: 15 KLLKSE---KNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRS 71
Query: 212 -----DTFVLNMIIKAYSKCLEVDEAIRVFHEM-GLYGCEPNAYSYSYIARGLCEKGRVN 265
D V +IK Y K D+A+ VF M ++GCEP SY+ + E +
Sbjct: 72 QECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWV 131
Query: 266 QGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVL 325
+ + + + P+ TY +++ + FE A L M PD +Y TV+
Sbjct: 132 KVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVI 191
Query: 326 EGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
L + + D+A +L DE +R ++ Y L+D
Sbjct: 192 NDLAKAGKLDDALELFDEMSERGVAPDVTCYNILID 227
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/292 (18%), Positives = 122/292 (41%), Gaps = 29/292 (9%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
+Y T+I L + A L +E+ + YN +I K A ++++
Sbjct: 185 FSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKD-HKTAMELWD 243
Query: 159 KMLRSEDCKPDLETYTLLYNSLLR------------------RFNKLHVCYVYLHAVRSL 200
++L P+++T+ ++ + L + R L+ +H +
Sbjct: 244 RLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDA 303
Query: 201 TKQMKAVGVIP---------DTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSY 251
KA V D N ++ + +C ++ E++ ++ M + N SY
Sbjct: 304 GNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIME-HKNSVNIVSY 362
Query: 252 SYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLG 311
+ + +GL E G++++ ++ M K +TY I + L ++ A+ V+ ++
Sbjct: 363 NILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVES 422
Query: 312 NSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+ D Y ++++ LC+++R +EA +L+ E K + ++ + L+ L
Sbjct: 423 SGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGL 474
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 111/227 (48%), Gaps = 11/227 (4%)
Query: 136 YNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYV-YL 194
YN+++ K S A +V+ +ML S+ P++ TY N L+R F C+ +
Sbjct: 172 YNAVLDATIRSKRNISFAENVFKEMLESQ-VSPNVFTY----NILIRGF-----CFAGNI 221
Query: 195 HAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYI 254
+L +M+ G +P+ N +I Y K ++D+ ++ M L G EPN SY+ +
Sbjct: 222 DVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVV 281
Query: 255 ARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSR 314
GLC +GR+ + EM + TY ++ + F A+ + +ML +
Sbjct: 282 INGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL 341
Query: 315 SPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
+P +TY +++ +C+ + A + LD+ + R + +E+ Y TL+D
Sbjct: 342 TPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD 388
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 125/279 (44%), Gaps = 10/279 (3%)
Query: 90 QQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFL 149
+R Y+ ++ Y T+IK + QA + E++ S+ Y S+I C +
Sbjct: 302 NRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMC-KAGN 360
Query: 150 FSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGV 209
+RA + ++M R P+ TYT L + ++ Y++ + ++M G
Sbjct: 361 MNRAMEFLDQM-RVRGLCPNERTYTTLVDGFSQKG--------YMNEAYRVLREMNDNGF 411
Query: 210 IPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLG 269
P N +I + ++++AI V +M G P+ SYS + G C V++ L
Sbjct: 412 SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALR 471
Query: 270 FYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLC 329
+EM EK ++P T TY ++ RR ++A ++ +ML PD TY ++ C
Sbjct: 472 VKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYC 531
Query: 330 RERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCR 368
E ++A L +E ++ + Y L++ L+ R
Sbjct: 532 MEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSR 570
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 133/335 (39%), Gaps = 42/335 (12%)
Query: 62 GFTP------SDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQ 115
GF P + +D + S + A ++F+ + + + Y +I+
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNV-FTYNILIRGFCFAGNID 222
Query: 116 QAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCK---PDLET 172
A TL +++ C ++ YN++I C R D K+LRS K P+L +
Sbjct: 223 VALTLFDKMETKGCLPNVVTYNTLIDGYCKL-----RKIDDGFKLLRSMALKGLEPNLIS 277
Query: 173 YTLLYNSLLRRFNKLHVCYVY---------------------------LHAVRSLTKQMK 205
Y ++ N L R V +V H + +M
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 337
Query: 206 AVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVN 265
G+ P +I + K ++ A+ +M + G PN +Y+ + G +KG +N
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397
Query: 266 QGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVL 325
+ +EM + PS TY ++ + + EDAI VL DM SPD ++Y TVL
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Query: 326 EGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
G CR DEA + E ++ I Y +L+
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 147/344 (42%), Gaps = 44/344 (12%)
Query: 50 KQFETWVNHLKPGFTPSDVDRAL-TSVSDPDLALDIFRWTAQQRSYNH----TDLNYLTI 104
K+ ++HL FTP L S +D L L W + + L+ LT
Sbjct: 33 KRHPYQLHHLSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILTK 92
Query: 105 IKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSII--------RFCCGRKFLFSRAFDV 156
K Y+ A+ L E+V A D Y S++ C +F
Sbjct: 93 FK------LYKTAQILAEDVAAKTLDDE---YASLVFKSLQETYDLCYSTSSVFDLVVKS 143
Query: 157 YNKM------------LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQM 204
Y+++ ++ P + +Y + ++ +R +K ++ + ++ K+M
Sbjct: 144 YSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIR--SKRNISFA-----ENVFKEM 196
Query: 205 KAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRV 264
V P+ F N++I+ + +D A+ +F +M GC PN +Y+ + G C+ ++
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 265 NQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTV 324
+ G + M K L P+ +Y +++ L + R ++ VL +M S D +TY T+
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 325 LEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCR 368
++G C+E +A + E + ++ S Y +L +H +C+
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSL---IHSMCK 357
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 25/267 (9%)
Query: 113 RYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLET 172
+ + A ++E++ + Y++++ C R + A V +M+ + KPD T
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC-RSYDVDEALRVKREMVE-KGIKPDTIT 487
Query: 173 YTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEA 232
Y+ L + C +Y ++M VG+ PD F +I AY ++++A
Sbjct: 488 YSSLIQGFCEQRRTKEACDLY--------EEMLRVGLPPDEFTYTALINAYCMEGDLEKA 539
Query: 233 IRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLG-----FYKE----------MKEK 277
+++ +EM G P+ +YS + GL ++ R + FY+E + E
Sbjct: 540 LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Query: 278 CLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEA 337
C + V ++ M +A +V MLG + PD Y ++ G CR +A
Sbjct: 600 CSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKA 659
Query: 338 FDLLDECKKRDISMSEKMYKTLLDDLH 364
+ L E K + L+ LH
Sbjct: 660 YTLYKEMVKSGFLLHTVTVIALVKALH 686
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 118/277 (42%), Gaps = 10/277 (3%)
Query: 77 DPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLY 136
D D AL + R ++ T + Y ++I+ RR ++A L EE++ Y
Sbjct: 465 DVDEALRVKREMVEKGIKPDT-ITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523
Query: 137 NSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSL-----LRRFNKLHVCY 191
++I C L +A ++N+M+ + PD+ TY++L N L R +L +
Sbjct: 524 TALINAYCMEGDL-EKALQLHNEMVE-KGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Query: 192 VYLHAVRSLTKQMKAVGVIPDTFVLNMI--IKAYSKCLEVDEAIRVFHEMGLYGCEPNAY 249
Y +V S + + +++ IK + + EA +VF M +P+
Sbjct: 582 FYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGT 641
Query: 250 SYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDM 309
+Y+ + G C G + + YKEM + T T + +V +L + + + V+ +
Sbjct: 642 AYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHV 701
Query: 310 LGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKK 346
L + + K ++E RE D D+L E K
Sbjct: 702 LRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAK 738
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 110/229 (48%), Gaps = 8/229 (3%)
Query: 135 LYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYL 194
++N +++ C + + AF V +M RS P+ TY+ L + L
Sbjct: 198 IFNILVKHHC-KNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE------ 250
Query: 195 HAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYI 254
AV + G+ PD N++I + + EV+ A ++ M GC PN Y+YS +
Sbjct: 251 -AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSAL 309
Query: 255 ARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSR 314
G C+ G++ + + E+K+ L+ T Y ++ + ++A+++L +M +
Sbjct: 310 MNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRC 369
Query: 315 SPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
D LTY +L GL E R++EA +LD+ + +++ Y+ +L+ L
Sbjct: 370 RADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNAL 418
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 128/287 (44%), Gaps = 10/287 (3%)
Query: 77 DPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLY 136
DP LDIF +QQ+ +NH + Y ++ L +++ + ++ ++ C L+
Sbjct: 68 DPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLF 127
Query: 137 NSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHA 196
+++R R L + +++N + KP L + N L+ + L+A
Sbjct: 128 LNLMRH-FSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYA 186
Query: 197 VRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCE-PNAYSYSYIA 255
+L G+ P+T + N+++K + K +++ A V EM G PN+ +YS +
Sbjct: 187 KHNL-------GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLM 239
Query: 256 RGLCEKGRVNQGLGFYKEMKEK-CLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSR 314
L R + + +++M K + P T+ +++ E A ++L M N
Sbjct: 240 DCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGC 299
Query: 315 SPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
+P+ Y ++ G C+ + EA DE KK + + Y TL++
Sbjct: 300 NPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMN 346
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 113/274 (41%), Gaps = 30/274 (10%)
Query: 97 TDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPL-YNSIIRFCCGRKFLFSRAFD 155
+ Y T++ L A R ++A L E++I+ P+ +N +I C R RA
Sbjct: 231 NSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFC-RAGEVERAKK 289
Query: 156 VYNKMLRSEDCKPDLETYTLLYNSLLR---------RFNKLHVCYVYLHAV--------- 197
+ + M + C P++ Y+ L N + F+++ + L V
Sbjct: 290 ILDFM-KKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCF 348
Query: 198 ---------RSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNA 248
L +MKA DT N+I++ S +EA+++ + G G N
Sbjct: 349 CRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNK 408
Query: 249 YSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFD 308
SY I LC G + + + F M E+ + P +T+ +V L E + VL
Sbjct: 409 GSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIG 468
Query: 309 MLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLD 342
L P ++ V+E +C+ER+ F+LLD
Sbjct: 469 FLRIGLIPGPKSWGAVVESICKERKLVHVFELLD 502
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 5/195 (2%)
Query: 172 TYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDE 231
T T++YN++ KL + + L ++MK G PD F N++I ++ + EVDE
Sbjct: 440 TDTMMYNTVFSALGKLK----QISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDE 495
Query: 232 AIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVC 291
AI +F E+ C+P+ SY+ + L + G V++ +KEM+EK L P TY ++
Sbjct: 496 AINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLME 555
Query: 292 SLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISM 351
R E A + +ML P+ +TY +L+ L + R EA DL + K++ ++
Sbjct: 556 CFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTP 615
Query: 352 SEKMYKTLLDDLHYV 366
Y T+L+ L V
Sbjct: 616 DSITY-TVLERLQSV 629
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 120/272 (44%), Gaps = 13/272 (4%)
Query: 90 QQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFL 149
++R + Y +I+ + + +A L E+I ++ YN++++ K +
Sbjct: 262 KKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGK-M 320
Query: 150 FSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGV 209
+A V+++M+ + C+P+ TY+LL N L+ V L V ++K+ G+
Sbjct: 321 VDKAIQVFSRMVET-GCRPNEYTYSLLLNLLVAEGQ-----LVRLDGVVEISKRYMTQGI 374
Query: 210 IPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLG 269
+ +++ SK V EA R+F +M + + SY + LC G+ + +
Sbjct: 375 ------YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIE 428
Query: 270 FYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLC 329
++ EK + T Y + +L ++ ++ M + SPD TY ++
Sbjct: 429 MLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFG 488
Query: 330 RERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
R DEA ++ +E ++ D Y +L++
Sbjct: 489 RVGEVDEAINIFEELERSDCKPDIISYNSLIN 520
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 111/263 (42%), Gaps = 45/263 (17%)
Query: 136 YNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLH 195
YN +I C R L A V N++L S++C+P + TYT+L + + +
Sbjct: 196 YNIMIGSLCSRGKL-DLALKVLNQLL-SDNCQPTVITYTILIEATMLEGG--------VD 245
Query: 196 AVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEP--------- 246
L +M + G+ PD F N II+ K VD A + + L GCEP
Sbjct: 246 EALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILL 305
Query: 247 --------------------------NAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLR 280
N +YS + LC G++ + + K MKEK L
Sbjct: 306 RALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT 365
Query: 281 PSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDL 340
P +Y ++ + + R + AIE L M+ + PD + Y TVL LC+ +AD+A ++
Sbjct: 366 PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEI 425
Query: 341 LDECKKRDISMSEKMYKTLLDDL 363
+ + S + Y T+ L
Sbjct: 426 FGKLGEVGCSPNSSSYNTMFSAL 448
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 139/309 (44%), Gaps = 12/309 (3%)
Query: 59 LKPG-FTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQA 117
LKP FT + + R + D A ++ R + + ++Y +++ L ++++
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVR-NLELKGCEPDVISYNILLRALLNQGKWEEG 317
Query: 118 ETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLY 177
E L+ ++ + CD ++ Y+ +I C R A ++ K+++ + PD +Y L
Sbjct: 318 EKLMTKMFSEKCDPNVVTYSILITTLC-RDGKIEEAMNLL-KLMKEKGLTPDAYSYDPLI 375
Query: 178 NSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFH 237
+ R +L V +L M + G +PD N ++ K + D+A+ +F
Sbjct: 376 AAFCRE-GRLDVAIEFLET-------MISDGCLPDIVNYNTVLATLCKNGKADQALEIFG 427
Query: 238 EMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDR 297
++G GC PN+ SY+ + L G + L EM + P TY ++ L +
Sbjct: 428 KLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREG 487
Query: 298 RFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYK 357
++A E+L DM P +TY VL G C+ R ++A ++L+ +E Y
Sbjct: 488 MVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYT 547
Query: 358 TLLDDLHYV 366
L++ + +
Sbjct: 548 VLIEGIGFA 556
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 80/151 (52%), Gaps = 5/151 (3%)
Query: 196 AVRSLTKQMKAVGVI-----PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYS 250
+R++ K ++ + ++ PD F N +I + K +D+A RV M P+ +
Sbjct: 136 TLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVT 195
Query: 251 YSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDML 310
Y+ + LC +G+++ L ++ +P+ TY I++ + ++ ++A++++ +ML
Sbjct: 196 YNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEML 255
Query: 311 GNSRSPDHLTYKTVLEGLCRERRADEAFDLL 341
PD TY T++ G+C+E D AF+++
Sbjct: 256 SRGLKPDMFTYNTIIRGMCKEGMVDRAFEMV 286
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 89/198 (44%), Gaps = 10/198 (5%)
Query: 113 RYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLET 172
R A +E +I+ C I YN+++ C + +A +++ K L C P+ +
Sbjct: 383 RLDVAIEFLETMISDGCLPDIVNYNTVLATLC-KNGKADQALEIFGK-LGEVGCSPNSSS 440
Query: 173 YTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEA 232
Y ++++L +K+ ++ L +M + G+ PD N +I + VDEA
Sbjct: 441 YNTMFSALWSSGDKIRALHMIL--------EMMSNGIDPDEITYNSMISCLCREGMVDEA 492
Query: 233 IRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCS 292
+ +M P+ +Y+ + G C+ R+ + + M RP+ +TY +++
Sbjct: 493 FELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552
Query: 293 LAMDRRFEDAIEVLFDML 310
+ +A+E+ D++
Sbjct: 553 IGFAGYRAEAMELANDLV 570
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 103/238 (43%), Gaps = 46/238 (19%)
Query: 167 KPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKC 226
+PD+ YN+L+ F K++ + + +M++ PDT N++I +
Sbjct: 155 QPDV----FAYNALINGFCKMN----RIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSR 206
Query: 227 LEVDEAIRVFHEMGLYGCEPNAYSYSY--------------------------------- 253
++D A++V +++ C+P +Y+
Sbjct: 207 GKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTY 266
Query: 254 --IARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLG 311
I RG+C++G V++ + ++ K P +Y I++ +L ++E+ +++ M
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Query: 312 NSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCRE 369
P+ +TY ++ LCR+ + +EA +LL K++ ++ Y L+ CRE
Sbjct: 327 EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF---CRE 381
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 127/270 (47%), Gaps = 10/270 (3%)
Query: 91 QRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLF 150
+R N + + ++I + +AE L +E+I + D +I YNS+I C L
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL- 361
Query: 151 SRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVI 210
A ++ M+ S+DC PD+ TY N+L+ F K + R ++++ G++
Sbjct: 362 DEAQQIFTLMV-SKDCLPDVVTY----NTLINGFCKAKKVVDGMELFRDMSRR----GLV 412
Query: 211 PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGF 270
+T +I + + + D A VF +M G PN +Y+ + GLC+ G++ + +
Sbjct: 413 GNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 472
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
++ +++ + P TY I+ + + ED ++ + PD + Y T++ G C+
Sbjct: 473 FEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCK 532
Query: 331 ERRADEAFDLLDECKKRDISMSEKMYKTLL 360
+ +EA+ L + K+ Y TL+
Sbjct: 533 KGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 121/270 (44%), Gaps = 10/270 (3%)
Query: 91 QRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLF 150
+ Y + + T++ L + +A LVE ++ C + Y ++I C R
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP- 221
Query: 151 SRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVI 210
A ++ NKM + + + D+ Y+ + +SL + Y ++ +L +M G+
Sbjct: 222 DLALNLLNKMEKGK-IEADVVIYSTVIDSLCK--------YRHVDDALNLFTEMDNKGIR 272
Query: 211 PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGF 270
PD F + +I +A R+ +M PN +++ + ++G++ +
Sbjct: 273 PDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKL 332
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
+ EM ++ + P+ TY ++ M R ++A ++ M+ PD +TY T++ G C+
Sbjct: 333 FDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCK 392
Query: 331 ERRADEAFDLLDECKKRDISMSEKMYKTLL 360
++ + +L + +R + + Y TL+
Sbjct: 393 AKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 126/284 (44%), Gaps = 13/284 (4%)
Query: 79 DLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNS 138
D A+D+F + R + + + ++ + +++ + E++ ++ YN
Sbjct: 47 DEAVDLFGEMVKSRPFPSI-VEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 139 IIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVY-LHAV 197
+I C R+ S A + KM++ P + T NSLL F C+ +
Sbjct: 106 MINCLC-RRSQLSFALAILGKMMKL-GYGPSIVTL----NSLLNGF-----CHGNRISEA 154
Query: 198 RSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARG 257
+L QM +G PDT ++ + + EA+ + M + GC+P+ +Y + G
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214
Query: 258 LCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPD 317
LC++G + L +M++ + Y ++ SL R +DA+ + +M PD
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD 274
Query: 318 HLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
TY +++ LC R +A LL + +R I+ + + +L+D
Sbjct: 275 VFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLID 318
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 109/231 (47%), Gaps = 12/231 (5%)
Query: 132 SIPLYNSIIR-FCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVC 190
SI NS++ FC G + S A + ++M+ +PD T+T L + L + NK
Sbjct: 134 SIVTLNSLLNGFCHGNRI--SEAVALVDQMVEM-GYQPDTVTFTTLVHGLFQH-NKAS-- 187
Query: 191 YVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYS 250
AV +L ++M G PD +I K E D A+ + ++M E +
Sbjct: 188 ----EAV-ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 242
Query: 251 YSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDML 310
YS + LC+ V+ L + EM K +RP TY ++ L R+ DA +L DML
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 311 GNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
+P+ +T+ ++++ +E + EA L DE +R I + Y +L++
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN 353
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 115/256 (44%), Gaps = 20/256 (7%)
Query: 111 GRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLF-----SRAFDVYNKMLRSED 165
G R +A LV++++ + +++ LF S A + +M+ +
Sbjct: 148 GNRISEAVALVDQMVEMGYQPDTVTFTTLVHG------LFQHNKASEAVALVERMV-VKG 200
Query: 166 CKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSK 225
C+PDL TY + N L +R +L +M+ + D + + +I + K
Sbjct: 201 CQPDLVTYGAVINGLCKRGEP--------DLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Query: 226 CLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTST 285
VD+A+ +F EM G P+ ++YS + LC GR + +M E+ + P+ T
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 286 YVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECK 345
+ ++ + A + + +A ++ +M+ S P+ +TY +++ G C R DEA +
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 346 KRDISMSEKMYKTLLD 361
+D Y TL++
Sbjct: 373 SKDCLPDVVTYNTLIN 388
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 101/211 (47%), Gaps = 9/211 (4%)
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPD 212
A D++ +M++S +E LL S + + K + V S ++M+ +GV +
Sbjct: 49 AVDLFGEMVKSRPFPSIVEFSKLL--SAIAKMKKFDL-------VISFGEKMEILGVSHN 99
Query: 213 TFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
+ N++I + ++ A+ + +M G P+ + + + G C R+++ +
Sbjct: 100 LYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 159
Query: 273 EMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRER 332
+M E +P T T+ +V L + +A+ ++ M+ PD +TY V+ GLC+
Sbjct: 160 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 219
Query: 333 RADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
D A +LL++ +K I +Y T++D L
Sbjct: 220 EPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 74/168 (44%)
Query: 175 LLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIR 234
L Y+ + ++ + ++ L L +M P + ++ A +K + D I
Sbjct: 27 LSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVIS 86
Query: 235 VFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLA 294
+M + G N Y+Y+ + LC + +++ L +M + PS T ++
Sbjct: 87 FGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFC 146
Query: 295 MDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLD 342
R +A+ ++ M+ PD +T+ T++ GL + +A EA L++
Sbjct: 147 HGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVE 194
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 128/270 (47%), Gaps = 10/270 (3%)
Query: 91 QRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLF 150
+R N + + +I + +AE L +E+I + D I Y+S+I C L
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL- 379
Query: 151 SRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVI 210
A ++ M+ S+DC P++ TY+ +L++ F K + L ++M G++
Sbjct: 380 DEAKHMFELMI-SKDCFPNVVTYS----TLIKGFCKAK----RVEEGMELFREMSQRGLV 430
Query: 211 PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGF 270
+T +I + + + D A VF +M G PN +Y+ + GLC+ G++ + +
Sbjct: 431 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 490
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
++ ++ + P TY I++ + + ED E+ ++ SP+ + Y T++ G CR
Sbjct: 491 FEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCR 550
Query: 331 ERRADEAFDLLDECKKRDISMSEKMYKTLL 360
+ +EA LL + K+ + Y TL+
Sbjct: 551 KGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 9/211 (4%)
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPD 212
A D++ M++S +E LL S + + NK + V SL +QM+ +G+ D
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLL--SAVAKMNKFEL-------VISLGEQMQTLGISHD 117
Query: 213 TFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
+ ++ I + + ++ A+ V +M G EP+ + S + G C R++ +
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177
Query: 273 EMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRER 332
+M E +P T T+ ++ L + + +A+ ++ M+ PD +TY TV+ GLC+
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 333 RADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
D A LL + +K I +Y T++D L
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 9/210 (4%)
Query: 151 SRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVI 210
S A + ++M++ C+PDL TY + N L +R + + SL K+M+ +
Sbjct: 205 SEAVALVDQMVQ-RGCQPDLVTYGTVVNGLCKRGD--------IDLALSLLKKMEKGKIE 255
Query: 211 PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGF 270
D + N II K +D+A+ +F EM G P+ ++YS + LC GR +
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
+M E+ + P+ T+ ++ + + + +A ++ +M+ S PD TY +++ G C
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Query: 331 ERRADEAFDLLDECKKRDISMSEKMYKTLL 360
R DEA + + +D + Y TL+
Sbjct: 376 HDRLDEAKHMFELMISKDCFPNVVTYSTLI 405
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 133/297 (44%), Gaps = 25/297 (8%)
Query: 72 LTSVSDPDLALDIFRWTAQQRSY-NHTDLN-YLTIIKQLNAGRRYQQAETLVEEVIAGAC 129
L+ + D A+D+F + R + + + N L+ + ++N +++ +L E++
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMN---KFELVISLGEQMQTLGI 114
Query: 130 DGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHV 189
+ Y+ I C R+ S A V KM++ +PD+ T + L N
Sbjct: 115 SHDLYTYSIFINCFC-RRSQLSLALAVLAKMMKL-GYEPDIVTLSSLLNG---------- 162
Query: 190 CYVYLHAVR-----SLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGC 244
Y H+ R +L QM +G PDTF +I + EA+ + +M GC
Sbjct: 163 ---YCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219
Query: 245 EPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIE 304
+P+ +Y + GLC++G ++ L K+M++ + Y I+ L + +DA+
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALN 279
Query: 305 VLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
+ +M PD TY +++ LC R +A LL + +R I+ + + L+D
Sbjct: 280 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 336
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 33/277 (11%)
Query: 91 QRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLF 150
QR + Y T++ L A +L++++ G + + +YN+II C K +
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHM- 274
Query: 151 SRAFDVYNKMLRSEDCKPDLETYT-----------------LLYNSLLRRFNKLHVCYVY 193
A +++ +M ++ +PD+ TY+ LL + + R+ N V +
Sbjct: 275 DDALNLFTEM-DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Query: 194 LHAVRSLTKQMKAV------------GVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGL 241
L + + K+ K V + PD F + +I + +DEA +F M
Sbjct: 334 L--IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 391
Query: 242 YGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFED 301
C PN +YS + +G C+ RV +G+ ++EM ++ L +T TY ++ R ++
Sbjct: 392 KDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 451
Query: 302 AIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
A V M+ P+ LTY +L+GLC+ + +A
Sbjct: 452 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 488
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 117/255 (45%), Gaps = 10/255 (3%)
Query: 91 QRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLF 150
+RS + Y ++I R +A+ + E +I+ C ++ Y+++I+ C K +
Sbjct: 356 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV- 414
Query: 151 SRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVI 210
+++ +M + L T+ Y +L+ F + C + + KQM +VGV
Sbjct: 415 EEGMELFREM-----SQRGLVGNTVTYTTLIHGFFQARDC----DNAQMVFKQMVSVGVH 465
Query: 211 PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGF 270
P+ N+++ K ++ +A+ VF + EP+ Y+Y+ + G+C+ G+V G
Sbjct: 466 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWEL 525
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
+ + K + P+ Y ++ E+A +L M + P+ TY T++ R
Sbjct: 526 FCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLR 585
Query: 331 ERRADEAFDLLDECK 345
+ + + +L+ E +
Sbjct: 586 DGDREASAELIKEMR 600
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 23/246 (9%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFD--- 155
+ Y T+IK +R ++ L E+ G+ Y ++I F +R D
Sbjct: 399 VTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH-----GFFQARDCDNAQ 453
Query: 156 -VYNKMLRSEDCKPDLETYTLLYNSLLR--RFNKLHVCYVYLHAVRSLTKQMKAVGVIPD 212
V+ +M+ S P++ TY +L + L + + K V + YL RS + PD
Sbjct: 454 MVFKQMV-SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ--RSTME--------PD 502
Query: 213 TFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
+ N++I+ K +V++ +F + L G PN +Y+ + G C KG + K
Sbjct: 503 IYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLK 562
Query: 273 EMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRER 332
+MKE P++ TY ++ + D E + E++ +M + D T V L +
Sbjct: 563 KMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDG 621
Query: 333 RADEAF 338
R D++F
Sbjct: 622 RLDKSF 627
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 139/316 (43%), Gaps = 38/316 (12%)
Query: 65 PSDVDRALTSVSDPDLALDIFRWTAQQR-SYNHTDLNYLTIIKQLNAGRRYQQAETLVEE 123
P + +T + DLAL IF + + + H Y +I+ +L+ R + E+L+ +
Sbjct: 49 PKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMAD 108
Query: 124 VIAGACDGSIPLYNSIIRFCCGRKFLFS--RAFDVYNK-------MLRSED--CKPDLET 172
L NS CG R + + + LR D K + +
Sbjct: 109 -----------LRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRS 157
Query: 173 YTLLYNSLLR--RFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVD 230
L N L++ RF+ +H + ++ G+ P+ F N+++KA K +++
Sbjct: 158 LNTLLNVLIQNQRFDLVHAMF---------KNSKESFGITPNIFTCNLLVKALCKKNDIE 208
Query: 231 EAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIV 290
A +V E+ G PN +Y+ I G +G + +EM ++ P +TY +++
Sbjct: 209 SAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLM 268
Query: 291 CSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKR--- 347
RF +A V+ DM N P+ +TY ++ LC+E+++ EA ++ DE +R
Sbjct: 269 DGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFM 328
Query: 348 -DISMSEKMYKTLLDD 362
D S+ K+ L +D
Sbjct: 329 PDSSLCCKVIDALCED 344
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 107/229 (46%), Gaps = 11/229 (4%)
Query: 113 RYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLET 172
R+ +A T+++++ + + Y +IR C K A +++++ML PD
Sbjct: 276 RFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEK-KSGEARNMFDEMLE-RSFMPDSSL 333
Query: 173 YTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEA 232
+ ++L C L ++M +PD +L+ +I K V EA
Sbjct: 334 CCKVIDALCEDHKVDEAC--------GLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEA 385
Query: 233 IRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCS 292
++F E G P+ +Y+ + G+CEKG + + + +M E+ +P+ TY +++
Sbjct: 386 RKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEG 444
Query: 293 LAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLL 341
L+ + ++ + VL +ML P+ T+ + EGL + + ++A ++
Sbjct: 445 LSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIV 493
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 117/273 (42%), Gaps = 15/273 (5%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCC--GRKFLFSRAFDV 156
+ Y TI+ A + A+ ++EE++ Y ++ C GR FS A V
Sbjct: 227 VTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGR---FSEAATV 283
Query: 157 YNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVL 216
+ M ++E +P+ TY ++ +L + R++ +M +PD+ +
Sbjct: 284 MDDMEKNE-IEPNEVTYGVMIRALCKEKKS--------GEARNMFDEMLERSFMPDSSLC 334
Query: 217 NMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKE 276
+I A + +VDEA ++ +M C P+ S + LC++GRV + + E E
Sbjct: 335 CKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF-E 393
Query: 277 KCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADE 336
K PS TY ++ + +A + DM P+ TY ++EGL + E
Sbjct: 394 KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKE 453
Query: 337 AFDLLDECKKRDISMSEKMYKTLLDDLHYVCRE 369
+L+E + ++ + L + L + +E
Sbjct: 454 GVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKE 486
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 99/217 (45%), Gaps = 11/217 (5%)
Query: 90 QQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFL 149
++ ++ Y +I+ L ++ +A + +E++ + L +I C
Sbjct: 288 EKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALC-EDHK 346
Query: 150 FSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGV 209
A ++ KML++ +C PD N+LL + R L + + G
Sbjct: 347 VDEACGLWRKMLKN-NCMPD--------NALLSTLIHWLCKEGRVTEARKLFDEFEK-GS 396
Query: 210 IPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLG 269
IP N +I + E+ EA R++ +M C+PNA++Y+ + GL + G V +G+
Sbjct: 397 IPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVR 456
Query: 270 FYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVL 306
+EM E P+ +T++I+ L + EDA++++
Sbjct: 457 VLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIV 493
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 133/287 (46%), Gaps = 14/287 (4%)
Query: 60 KPGFTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAET 119
K P++V + +V DP L ++ ++++ Y T+ Y +I + + Y + E
Sbjct: 57 KDWLAPNEVLKIFDNVKDPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEE 116
Query: 120 LVEEV-IAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYN 178
++ + + C S + +++R +RA ++ M C P +++ + N
Sbjct: 117 VMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGM-PDFGCWPSSKSFNFILN 175
Query: 179 SLL--RRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVF 236
L+ + F+++H +V +GV D LN++IK + ++ A+++
Sbjct: 176 LLVSAKLFDEIHKIFV----------SAPKLGVEIDACCLNILIKGLCESGNLEAALQLL 225
Query: 237 HEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMD 296
E PN ++S + RG C KG+ + + M+++ + P T T+ I++ L
Sbjct: 226 DEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKK 285
Query: 297 RRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDE 343
R E+ I++L M P+ TY+ VL GL ++R EA +++ +
Sbjct: 286 GRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQ 332
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%)
Query: 200 LTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLC 259
L ++M+ + PDT N++I K V+E I + M + GCEPN +Y + GL
Sbjct: 259 LLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLL 318
Query: 260 EKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHL 319
+K R + +M +RPS +Y +V L + + VL M+ + P L
Sbjct: 319 DKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTL 378
Query: 320 TYKTVLEGLCRERRADEAFDL 340
+ V++ + + D +L
Sbjct: 379 MWWKVVQCVVSKNNDDSQANL 399
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 10/227 (4%)
Query: 135 LYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYL 194
+Y SII C R + A + +++M+R + PD YT L + +R + +
Sbjct: 318 IYGSIIGLLC-RICKLAEAEEAFSEMIR-QGILPDTVVYTTLIDGFCKRGD--------I 367
Query: 195 HAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYI 254
A +M + + PD II + + ++ EA ++FHEM G EP++ +++ +
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 255 ARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSR 314
G C+ G + + M + P+ TY ++ L + + A E+L +M
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 315 SPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
P+ TY +++ GLC+ +EA L+ E + ++ Y TL+D
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 118/261 (45%), Gaps = 10/261 (3%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKM 160
Y +II L + +AE E+I +Y ++I C R + RA +
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI--RAASKFFYE 376
Query: 161 LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMII 220
+ S D PD+ TYT + + + + + ++ +M G+ PD+ +I
Sbjct: 377 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF--------HEMFCKGLEPDSVTFTELI 428
Query: 221 KAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLR 280
Y K + +A RV + M GC PN +Y+ + GLC++G ++ EM + L+
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 281 PSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDL 340
P+ TY IV L E+A++++ + + D +TY T+++ C+ D+A ++
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 341 LDECKKRDISMSEKMYKTLLD 361
L E + + + + L++
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMN 569
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 119/303 (39%), Gaps = 29/303 (9%)
Query: 85 FRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCC 144
F + R L Y II +A L E+ + + +I C
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 145 GRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLY------------NSLLRRFNKLHV--- 189
+ AF V+N M+++ C P++ TYT L N LL K+ +
Sbjct: 433 KAGHM-KDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 190 CYVYLHAVRSLTK------------QMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFH 237
+ Y V L K + +A G+ DT ++ AY K E+D+A +
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 238 EMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDR 297
EM G +P +++ + G C G + G M K + P+ +T+ +V +
Sbjct: 551 EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRN 610
Query: 298 RFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYK 357
+ A + DM PD TY+ +++G C+ R EA+ L E K + S+S Y
Sbjct: 611 NLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYS 670
Query: 358 TLL 360
L+
Sbjct: 671 VLI 673
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 106/246 (43%), Gaps = 18/246 (7%)
Query: 126 AGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSE--DCKPDLETYTLLYNSLLRR 183
G C ++ YN +I F C R + ++ +L E PD+ +Y+ + N R
Sbjct: 240 VGVC-WNVASYNIVIHFVCQ----LGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR- 293
Query: 184 FNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYG 243
+ L V L + MK G+ P++++ II + ++ EA F EM G
Sbjct: 294 -------FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 244 CEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAI 303
P+ Y+ + G C++G + F+ EM + + P TY I+ +A
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 304 EVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
++ +M PD +T+ ++ G C+ +AF + + + S + Y TL+D L
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 364 HYVCRE 369
C+E
Sbjct: 467 ---CKE 469
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%)
Query: 203 QMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKG 262
+M G++PDT V +I + K ++ A + F+EM P+ +Y+ I G C+ G
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 263 RVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYK 322
+ + + EM K L P + T+ ++ +DA V M+ SP+ +TY
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 460
Query: 323 TVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
T+++GLC+E D A +LL E K + + Y ++++ L
Sbjct: 461 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 101/245 (41%), Gaps = 10/245 (4%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
Y +I+ L ++A LV E A + Y +++ C + +A ++
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC-KSGEMDKAQEILK 550
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
+ML + +P + T+ +L N LH L L M A G+ P+ N
Sbjct: 551 EML-GKGLQPTIVTFNVLMNGFC-----LHG---MLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
++K Y + A ++ +M G P+ +Y + +G C+ + + ++EMK K
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
S STY +++ ++F +A EV M + D + + + +R D
Sbjct: 662 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIV 721
Query: 339 DLLDE 343
D +DE
Sbjct: 722 DPIDE 726
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 124/303 (40%), Gaps = 28/303 (9%)
Query: 77 DPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLN-AGRRYQQAETLVEEVIAGACDGSIPL 135
D L LD F W +R N L L I+ L A + + A++L+ + +
Sbjct: 100 DYRLVLDFFDWARSRRDSN---LESLCIVIHLAVASKDLKVAQSLISSFWERP---KLNV 153
Query: 136 YNSIIRFCCGRKFLFS------RAFDVYNKML-------RSEDCKPDLETYTLLY----- 177
+S ++F + + R FDV+ ++L + + Y L+
Sbjct: 154 TDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSC 213
Query: 178 NSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFH 237
N L R +K CY A+ + ++ VGV + N++I + + EA +
Sbjct: 214 NVYLTRLSK--DCYKTATAI-IVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLL 270
Query: 238 EMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDR 297
M L G P+ SYS + G C G +++ + MK K L+P++ Y I+ L
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 298 RFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYK 357
+ +A E +M+ PD + Y T+++G C+ A E RDI+ Y
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 358 TLL 360
++
Sbjct: 391 AII 393
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/263 (18%), Positives = 109/263 (41%), Gaps = 10/263 (3%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
+ Y T+I L A L+ E+ +I YNSI+ C + A +
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC-KSGNIEEAVKLVG 515
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
+ + D TYT L ++ + + + + K+M G+ P N+
Sbjct: 516 E-FEAAGLNADTVTYTTLMDAYCKSGE--------MDKAQEILKEMLGKGLQPTIVTFNV 566
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
++ + +++ ++ + M G PNA +++ + + C + + YK+M +
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
+ P TY +V R ++A + +M G S TY +++G + ++ EA
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAR 686
Query: 339 DLLDECKKRDISMSEKMYKTLLD 361
++ D+ ++ ++ ++++ D
Sbjct: 687 EVFDQMRREGLAADKEIFDFFSD 709
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 10/227 (4%)
Query: 135 LYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYL 194
+Y SII C R + A + +++M+R + PD YT L + +R + +
Sbjct: 318 IYGSIIGLLC-RICKLAEAEEAFSEMIR-QGILPDTVVYTTLIDGFCKRGD--------I 367
Query: 195 HAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYI 254
A +M + + PD II + + ++ EA ++FHEM G EP++ +++ +
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 255 ARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSR 314
G C+ G + + M + P+ TY ++ L + + A E+L +M
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 315 SPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
P+ TY +++ GLC+ +EA L+ E + ++ Y TL+D
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 118/261 (45%), Gaps = 10/261 (3%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKM 160
Y +II L + +AE E+I +Y ++I C R + RA +
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI--RAASKFFYE 376
Query: 161 LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMII 220
+ S D PD+ TYT + + + + + ++ +M G+ PD+ +I
Sbjct: 377 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF--------HEMFCKGLEPDSVTFTELI 428
Query: 221 KAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLR 280
Y K + +A RV + M GC PN +Y+ + GLC++G ++ EM + L+
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 281 PSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDL 340
P+ TY IV L E+A++++ + + D +TY T+++ C+ D+A ++
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 341 LDECKKRDISMSEKMYKTLLD 361
L E + + + + L++
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMN 569
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 119/303 (39%), Gaps = 29/303 (9%)
Query: 85 FRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCC 144
F + R L Y II +A L E+ + + +I C
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 145 GRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLY------------NSLLRRFNKLHV--- 189
+ AF V+N M+++ C P++ TYT L N LL K+ +
Sbjct: 433 KAGHM-KDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 190 CYVYLHAVRSLTK------------QMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFH 237
+ Y V L K + +A G+ DT ++ AY K E+D+A +
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 238 EMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDR 297
EM G +P +++ + G C G + G M K + P+ +T+ +V +
Sbjct: 551 EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRN 610
Query: 298 RFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYK 357
+ A + DM PD TY+ +++G C+ R EA+ L E K + S+S Y
Sbjct: 611 NLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYS 670
Query: 358 TLL 360
L+
Sbjct: 671 VLI 673
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 106/246 (43%), Gaps = 18/246 (7%)
Query: 126 AGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSE--DCKPDLETYTLLYNSLLRR 183
G C ++ YN +I F C R + ++ +L E PD+ +Y+ + N R
Sbjct: 240 VGVC-WNVASYNIVIHFVCQ----LGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR- 293
Query: 184 FNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYG 243
+ L V L + MK G+ P++++ II + ++ EA F EM G
Sbjct: 294 -------FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 244 CEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAI 303
P+ Y+ + G C++G + F+ EM + + P TY I+ +A
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 304 EVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
++ +M PD +T+ ++ G C+ +AF + + + S + Y TL+D L
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 364 HYVCRE 369
C+E
Sbjct: 467 ---CKE 469
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%)
Query: 203 QMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKG 262
+M G++PDT V +I + K ++ A + F+EM P+ +Y+ I G C+ G
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 263 RVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYK 322
+ + + EM K L P + T+ ++ +DA V M+ SP+ +TY
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 460
Query: 323 TVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
T+++GLC+E D A +LL E K + + Y ++++ L
Sbjct: 461 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 101/245 (41%), Gaps = 10/245 (4%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
Y +I+ L ++A LV E A + Y +++ C + +A ++
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC-KSGEMDKAQEILK 550
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
+ML + +P + T+ +L N LH L L M A G+ P+ N
Sbjct: 551 EML-GKGLQPTIVTFNVLMNGFC-----LHG---MLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
++K Y + A ++ +M G P+ +Y + +G C+ + + ++EMK K
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
S STY +++ ++F +A EV M + D + + + +R D
Sbjct: 662 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIV 721
Query: 339 DLLDE 343
D +DE
Sbjct: 722 DPIDE 726
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 124/303 (40%), Gaps = 28/303 (9%)
Query: 77 DPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLN-AGRRYQQAETLVEEVIAGACDGSIPL 135
D L LD F W +R N L L I+ L A + + A++L+ + +
Sbjct: 100 DYRLVLDFFDWARSRRDSN---LESLCIVIHLAVASKDLKVAQSLISSFWERP---KLNV 153
Query: 136 YNSIIRFCCGRKFLFS------RAFDVYNKML-------RSEDCKPDLETYTLLY----- 177
+S ++F + + R FDV+ ++L + + Y L+
Sbjct: 154 TDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSC 213
Query: 178 NSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFH 237
N L R +K CY A+ + ++ VGV + N++I + + EA +
Sbjct: 214 NVYLTRLSK--DCYKTATAI-IVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLL 270
Query: 238 EMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDR 297
M L G P+ SYS + G C G +++ + MK K L+P++ Y I+ L
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 298 RFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYK 357
+ +A E +M+ PD + Y T+++G C+ A E RDI+ Y
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 358 TLL 360
++
Sbjct: 391 AII 393
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/263 (18%), Positives = 109/263 (41%), Gaps = 10/263 (3%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
+ Y T+I L A L+ E+ +I YNSI+ C + A +
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC-KSGNIEEAVKLVG 515
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
+ + D TYT L ++ + + + + K+M G+ P N+
Sbjct: 516 E-FEAAGLNADTVTYTTLMDAYCKSGE--------MDKAQEILKEMLGKGLQPTIVTFNV 566
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
++ + +++ ++ + M G PNA +++ + + C + + YK+M +
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
+ P TY +V R ++A + +M G S TY +++G + ++ EA
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAR 686
Query: 339 DLLDECKKRDISMSEKMYKTLLD 361
++ D+ ++ ++ ++++ D
Sbjct: 687 EVFDQMRREGLAADKEIFDFFSD 709
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 138/299 (46%), Gaps = 17/299 (5%)
Query: 68 VDRALTSVSDPDLALDIF-RWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIA 126
V L D DLAL++ + A + + N TII L R A L +E+
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN--TIIDSLCKYRHVDDALNLFKEMET 288
Query: 127 GACDGSIPLYNSIIRFCC--GRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRF 184
++ Y+S+I C GR +S A + + M+ + P+L T+ L ++ ++
Sbjct: 289 KGIRPNVVTYSSLISCLCSYGR---WSDASQLLSDMIEKK-INPNLVTFNALIDAFVKEG 344
Query: 185 NKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGC 244
+ +Y ++ + PD F N ++ + +D+A ++F M C
Sbjct: 345 KFVEAEKLYDDMIKR--------SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396
Query: 245 EPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIE 304
P+ +Y+ + +G C+ RV G ++EM + L T TY ++ L D ++A +
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 456
Query: 305 VLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
V M+ + PD +TY +L+GLC + ++A ++ D +K +I + +Y T+++ +
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 515
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 127/270 (47%), Gaps = 10/270 (3%)
Query: 91 QRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLF 150
++ N + + +I ++ +AE L +++I + D I YNS++ C L
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL- 381
Query: 151 SRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVI 210
+A ++ M+ S+DC PD+ TY N+L++ F K + L ++M G++
Sbjct: 382 DKAKQMFEFMV-SKDCFPDVVTY----NTLIKGFCKSK----RVEDGTELFREMSHRGLV 432
Query: 211 PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGF 270
DT +I+ + D A +VF +M G P+ +YS + GLC G++ + L
Sbjct: 433 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 492
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
+ M++ ++ Y ++ + + +D ++ + P+ +TY T++ GLC
Sbjct: 493 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 552
Query: 331 ERRADEAFDLLDECKKRDISMSEKMYKTLL 360
+R EA+ LL + K+ + Y TL+
Sbjct: 553 KRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 133/287 (46%), Gaps = 15/287 (5%)
Query: 79 DLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNS 138
D AL++F+ + + + Y ++I L + R+ A L+ ++I + ++ +N+
Sbjct: 277 DDALNLFK-EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 139 II-RFCCGRKFLFSRAFDVYNKML-RSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHA 196
+I F KF+ A +Y+ M+ RS D PD+ TY NSL+ F + L
Sbjct: 336 LIDAFVKEGKFV--EAEKLYDDMIKRSID--PDIFTY----NSLVNGF----CMHDRLDK 383
Query: 197 VRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIAR 256
+ + + M + PD N +IK + K V++ +F EM G + +Y+ + +
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 257 GLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSP 316
GL G + +K+M + P TY I++ L + + E A+EV M +
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503
Query: 317 DHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
D Y T++EG+C+ + D+ +DL + + + Y T++ L
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 550
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 126/293 (43%), Gaps = 51/293 (17%)
Query: 111 GRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFD---VYNKMLRSEDCK 167
G+R A LV++++ + ++I FL ++A + + ++M++ C+
Sbjct: 168 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGL----FLHNKASEAVALVDRMVQ-RGCQ 222
Query: 168 PDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCL 227
P+L TY ++ N L +R + +L +M+A + D + N II + K
Sbjct: 223 PNLVTYGVVVNGLCKRGDT--------DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYR 274
Query: 228 EVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYV 287
VD+A+ +F EM G PN +YS + LC GR + +M EK + P+ T+
Sbjct: 275 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 334
Query: 288 IIVCSLAMDRRFEDAIEVLFDMLGNSRSPD-------------H---------------- 318
++ + + +F +A ++ DM+ S PD H
Sbjct: 335 ALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK 394
Query: 319 ------LTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHY 365
+TY T+++G C+ +R ++ +L E R + Y TL+ L +
Sbjct: 395 DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 108/266 (40%), Gaps = 55/266 (20%)
Query: 136 YNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLH 195
YN +I C R+ S A + KM++ +P + T + L N Y H
Sbjct: 123 YNILINCFC-RRSQISLALALLGKMMKL-GYEPSIVTLSSLLNG-------------YCH 167
Query: 196 AVR-----SLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYS 250
R +L QM +G PDT +I + EA+ + M GC+PN +
Sbjct: 168 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 227
Query: 251 YSYIARGLCEKG-----------------------------------RVNQGLGFYKEMK 275
Y + GLC++G V+ L +KEM+
Sbjct: 228 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 287
Query: 276 EKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRAD 335
K +RP+ TY ++ L R+ DA ++L DM+ +P+ +T+ +++ +E +
Sbjct: 288 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 347
Query: 336 EAFDLLDECKKRDISMSEKMYKTLLD 361
EA L D+ KR I Y +L++
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVN 373
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 99/211 (46%), Gaps = 9/211 (4%)
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPD 212
A ++ M++S +E +N LL K+ V SL ++M+ + ++
Sbjct: 69 AIGLFGGMVKSRPLPSIVE-----FNKLLSAIAKMK----KFDVVISLGEKMQRLEIVHG 119
Query: 213 TFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
+ N++I + + ++ A+ + +M G EP+ + S + G C R++ +
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 273 EMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRER 332
+M E RP T T+ ++ L + + +A+ ++ M+ P+ +TY V+ GLC+
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 333 RADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
D A +LL++ + I ++ T++D L
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSL 270
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 121/296 (40%), Gaps = 13/296 (4%)
Query: 68 VDRALTSVSDPDLA---LDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEV 124
V R L +P +A +D+ R+++ +Y I++ + A L +
Sbjct: 17 VHRNLQGKGNPRIAPSSIDLCGMCYWGRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGM 76
Query: 125 IAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRF 184
+ SI +N ++ K F + KM R E L TY +L N RR
Sbjct: 77 VKSRPLPSIVEFNKLLSAIAKMK-KFDVVISLGEKMQRLEIVH-GLYTYNILINCFCRRS 134
Query: 185 NKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGC 244
+ +L +M +G P L+ ++ Y + +A+ + +M G
Sbjct: 135 Q--------ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 245 EPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIE 304
P+ +++ + GL + ++ + M ++ +P+ TY ++V L + A+
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246
Query: 305 VLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
+L M D + + T+++ LC+ R D+A +L E + + I + Y +L+
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 130/279 (46%), Gaps = 10/279 (3%)
Query: 90 QQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFL 149
Q+R YLTI K L+ +QA + ++ + YN +I +F
Sbjct: 145 QKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFC 204
Query: 150 FSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGV 209
+ A +VY +M+ E +P L+TY+ L L +R + + +V L K+M+ +G+
Sbjct: 205 -TEAMEVYRRMIL-EGFRPSLQTYSSLMVGLGKRRD--------IDSVMGLLKEMETLGL 254
Query: 210 IPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLG 269
P+ + + I+ + +++EA + M GC P+ +Y+ + LC +++
Sbjct: 255 KPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKE 314
Query: 270 FYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLC 329
+++MK +P TY+ ++ + +R + + +M + PD +T+ +++ LC
Sbjct: 315 VFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALC 374
Query: 330 RERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCR 368
+ EAFD LD + + I + Y TL+ L V R
Sbjct: 375 KAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHR 413
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 11/267 (4%)
Query: 104 IIKQLNAGRRYQQAETLVEEVIA-GACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLR 162
+I + A A + E ++A G C + IIR+ C + S A ++ K +
Sbjct: 719 LIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNV-SGARTLFEKFTK 777
Query: 163 SEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKA 222
+P L TY LL LL + + + Q+K+ G IPD N ++ A
Sbjct: 778 DLGVQPKLPTYNLLIGGLLEA--------DMIEIAQDVFLQVKSTGCIPDVATYNFLLDA 829
Query: 223 YSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKE-MKEKCLRP 281
Y K ++DE ++ EM + CE N +++ + GL + G V+ L Y + M ++ P
Sbjct: 830 YGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSP 889
Query: 282 STSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLL 341
+ TY ++ L+ R +A ++ ML P+ Y ++ G + AD A L
Sbjct: 890 TACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALF 949
Query: 342 DECKKRDISMSEKMYKTLLDDLHYVCR 368
K + K Y L+D L V R
Sbjct: 950 KRMVKEGVRPDLKTYSVLVDCLCMVGR 976
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 130/289 (44%), Gaps = 42/289 (14%)
Query: 87 WTAQQRSYNHTDLNYLTII-----KQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIR 141
W+ ++ + D+ TI+ K N G + + + ++ I ++ YN++I
Sbjct: 351 WSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILP----NLHTYNTLI- 405
Query: 142 FCCG--RKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYN---------SLLRRFNKLH-- 188
CG R A +++ M S KP TY + + S L F K+
Sbjct: 406 --CGLLRVHRLDDALELFGNM-ESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK 462
Query: 189 -------VCYVYLHAV---------RSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEA 232
C L+++ + + +K +G++PD+ NM++K YSK E+DEA
Sbjct: 463 GIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEA 522
Query: 233 IRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCS 292
I++ EM GCEP+ + + L + RV++ + MKE L+P+ TY ++
Sbjct: 523 IKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAG 582
Query: 293 LAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLL 341
L + + ++AIE+ M+ P+ +T+ T+ + LC+ A +L
Sbjct: 583 LGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 631
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 11/196 (5%)
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPD 212
A D+Y ++ D P TY L + L + L+ + L + M G P+
Sbjct: 874 ALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR--------LYEAKQLFEGMLDYGCRPN 925
Query: 213 TFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
+ N++I + K E D A +F M G P+ +YS + LC GRV++GL ++K
Sbjct: 926 CAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFK 985
Query: 273 EMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSR--SPDHLTYKTVLEGLCR 330
E+KE L P Y +I+ L R E+A+ VLF+ + SR +PD TY +++ L
Sbjct: 986 ELKESGLNPDVVCYNLIINGLGKSHRLEEAL-VLFNEMKTSRGITPDLYTYNSLILNLGI 1044
Query: 331 ERRADEAFDLLDECKK 346
+EA + +E ++
Sbjct: 1045 AGMVEEAGKIYNEIQR 1060
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 120/264 (45%), Gaps = 17/264 (6%)
Query: 63 FTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVE 122
T + V L + D ALD++ R ++ T Y +I L+ R +A+ L E
Sbjct: 856 ITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFE 915
Query: 123 EVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLL- 181
++ C + +YN +I G+ A ++ +M++ E +PDL+TY++L + L
Sbjct: 916 GMLDYGCRPNCAIYNILIN-GFGKAGEADAACALFKRMVK-EGVRPDLKTYSVLVDCLCM 973
Query: 182 --RRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEM 239
R LH K++K G+ PD N+II K ++EA+ +F+EM
Sbjct: 974 VGRVDEGLH-----------YFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Query: 240 GLY-GCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRR 298
G P+ Y+Y+ + L G V + Y E++ L P+ T+ ++ ++ +
Sbjct: 1023 KTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1082
Query: 299 FEDAIEVLFDMLGNSRSPDHLTYK 322
E A V M+ SP+ TY+
Sbjct: 1083 PEHAYAVYQTMVTGGFSPNTGTYE 1106
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 127/296 (42%), Gaps = 17/296 (5%)
Query: 71 ALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACD 130
AL + D A ++F R + + Y+T++ + + R + E+ D
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGR-HKPDRVTYITLLDRFSDNRDLDSVKQFWSEM---EKD 357
Query: 131 GSIP---LYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKL 187
G +P + ++ C + F AFD + M R + P+L TY L LLR +
Sbjct: 358 GHVPDVVTFTILVDALC-KAGNFGEAFDTLDVM-RDQGILPNLHTYNTLICGLLR----V 411
Query: 188 HVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPN 247
H L L M+++GV P + + I Y K + A+ F +M G PN
Sbjct: 412 H----RLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPN 467
Query: 248 AYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLF 307
+ + L + GR + + +K+ L P + TY +++ + ++AI++L
Sbjct: 468 IVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLS 527
Query: 308 DMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+M+ N PD + +++ L + R DEA+ + K+ + + Y TLL L
Sbjct: 528 EMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGL 583
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 109/243 (44%), Gaps = 12/243 (4%)
Query: 100 NYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSII-RFCCGRKFLFSRAFDVYN 158
+Y T+I+ G+ ++A L E+ C S+ + +I FC K + F
Sbjct: 179 SYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM 238
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
K + LE ++Y SL+R F L ++L ++ G P N
Sbjct: 239 KFM-------GLEADLVVYTSLIRGFCDCG----ELDRGKALFDEVLERGDSPCAITYNT 287
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
+I+ + K ++ EA +F M G PN Y+Y+ + GLC G+ + L M EK
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
P+ TY II+ L D DA+E++ M PD++TY +L GLC + DEA
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407
Query: 339 DLL 341
LL
Sbjct: 408 KLL 410
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 134/274 (48%), Gaps = 12/274 (4%)
Query: 91 QRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIR-FCCGRKFL 149
+R + N+ ++K L +A +L+ E+ + + YN++IR FC G++
Sbjct: 135 KRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKEL- 193
Query: 150 FSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGV 209
+A ++ N+M + C L T+ +L ++ + K+ +L K+MK +G+
Sbjct: 194 -EKALELANEM-KGSGCSWSLVTWGILIDAFCKA-GKMDEAMGFL-------KEMKFMGL 243
Query: 210 IPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLG 269
D V +I+ + C E+D +F E+ G P A +Y+ + RG C+ G++ +
Sbjct: 244 EADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASE 303
Query: 270 FYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLC 329
++ M E+ +RP+ TY ++ L + ++A+++L M+ P+ +TY ++ LC
Sbjct: 304 IFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLC 363
Query: 330 RERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
++ +A ++++ KKR Y LL L
Sbjct: 364 KDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Query: 212 DTFV----LNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQG 267
DTF+ L+ +++ Y + + A V M G N Y+++ + +GLC +
Sbjct: 102 DTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKA 161
Query: 268 LGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEG 327
+ +EM+ L P +Y ++ + E A+E+ +M G+ S +T+ +++
Sbjct: 162 VSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDA 221
Query: 328 LCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
C+ + DEA L E K + +Y +L+
Sbjct: 222 FCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLI 254
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 127/302 (42%), Gaps = 22/302 (7%)
Query: 71 ALTSVSDPDLALDIFRWTAQQRSYNHTD-LNYLTIIKQLNAGRRYQQA----ETLVEEVI 125
L + D D A + + SY D ++Y +I L R QA + LVE++
Sbjct: 396 GLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG 455
Query: 126 AGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFN 185
AG + L NS ++ G ++A +++ ++ S+ + +TYT + + +
Sbjct: 456 AGDRVTTNILLNSTLK--AGD---VNKAMELWKQISDSKIVRNS-DTYTAMIDGFCKTG- 508
Query: 186 KLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCE 245
L+ + L +M+ + P F N ++ + K +D+A R+F EM
Sbjct: 509 -------MLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNF 561
Query: 246 PNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEV 305
P+ S++ + G + G + M L P TY ++ ++AI
Sbjct: 562 PDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISF 621
Query: 306 LFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHY 365
M+ + PD +VL+ + D+ +L+ + +DI + +++ T++D Y
Sbjct: 622 FDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMD---Y 678
Query: 366 VC 367
+C
Sbjct: 679 MC 680
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 138/307 (44%), Gaps = 11/307 (3%)
Query: 62 GFTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLV 121
G + + V +AL + D A+++FR +++ Y T++ L R +A L+
Sbjct: 187 GLSFNLVIKALCKLRFVDRAIEVFRGMPERKCL-PDGYTYCTLMDGLCKEERIDEAVLLL 245
Query: 122 EEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLL 181
+E+ + C S +YN +I C + L V N L+ C P+ TY L + L
Sbjct: 246 DEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKG--CVPNEVTYNTLIHGLC 303
Query: 182 RRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGL 241
+ L SL ++M + IP+ +I K +A+R+ M
Sbjct: 304 LKGK--------LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEE 355
Query: 242 YGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFED 301
G N + YS + GL ++G+ + + +++M EK +P+ Y ++V L + + +
Sbjct: 356 RGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNE 415
Query: 302 AIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
A E+L M+ + P+ TY ++++G + +EA + E K S ++ Y L+D
Sbjct: 416 AKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLID 475
Query: 362 DLHYVCR 368
L V R
Sbjct: 476 GLCGVGR 482
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 118/251 (47%), Gaps = 17/251 (6%)
Query: 97 TDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIR--FCCGRKFLFSRAF 154
D+ Y T+I L RR A L+ + + +Y+ +I F G+ A
Sbjct: 326 NDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKA---EEAM 382
Query: 155 DVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTF 214
++ KM + CKP++ Y++L + L R + + + +M A G +P+ +
Sbjct: 383 SLWRKMAE-KGCKPNIVVYSVLVDGLCREGKP--------NEAKEILNRMIASGCLPNAY 433
Query: 215 VLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEM 274
+ ++K + K +EA++V+ EM GC N + YS + GLC GRV + + + +M
Sbjct: 434 TYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKM 493
Query: 275 KEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSR---SPDHLTYKTVLEGLCRE 331
++P T Y I+ L + A+++ +ML PD +TY +L+GLC +
Sbjct: 494 LTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQ 553
Query: 332 RRADEAFDLLD 342
+ A DLL+
Sbjct: 554 KDISRAVDLLN 564
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 135/307 (43%), Gaps = 19/307 (6%)
Query: 68 VDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAG 127
V RA PD A+D+F + + ++ +++ + Y + + V+
Sbjct: 118 VFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNS 177
Query: 128 ACDGSIPL----YNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRR 183
+ +I +N +I+ C +F+ RA +V+ M C PD TY L + L +
Sbjct: 178 NMNMNISPNGLSFNLVIKALCKLRFV-DRAIEVFRGM-PERKCLPDGYTYCTLMDGLCKE 235
Query: 184 FNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYG 243
+ L +M++ G P + N++I K ++ ++ M L G
Sbjct: 236 ER--------IDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKG 287
Query: 244 CEPNAYSYSYIARGLCEKGRVNQGLGFYKEM-KEKCLRPSTSTYVIIVCSLAMDRRFEDA 302
C PN +Y+ + GLC KG++++ + + M KC+ P+ TY ++ L RR DA
Sbjct: 288 CVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCI-PNDVTYGTLINGLVKQRRATDA 346
Query: 303 IEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDD 362
+ +L M + Y ++ GL +E +A+EA L + ++ + +Y L+D
Sbjct: 347 VRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDG 406
Query: 363 LHYVCRE 369
L CRE
Sbjct: 407 L---CRE 410
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 7/160 (4%)
Query: 209 VIPDTFVLNMIIKAYSKCLEVDEAIRVFHEM-GLYGCEPNAYSYSYIARGLCEKGRVNQG 267
+I +F++ + +AY K D+A+ +FH M + C+ + S++ + + +G ++G
Sbjct: 110 IIERSFIV--VFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRG 167
Query: 268 LGFYKEMKEKCLR----PSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKT 323
L FY + + P+ ++ +++ +L R + AIEV M PD TY T
Sbjct: 168 LEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCT 227
Query: 324 VLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+++GLC+E R DEA LLDE + S S +Y L+D L
Sbjct: 228 LMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGL 267
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/307 (19%), Positives = 123/307 (40%), Gaps = 61/307 (19%)
Query: 88 TAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRK 147
+ ++R Y+ Y +I L + ++A +L ++ C +I +Y+ ++ C R+
Sbjct: 352 SMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLC-RE 410
Query: 148 FLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTK----- 202
+ A ++ N+M+ S C P+ TY+ SL++ F K +C + + + K
Sbjct: 411 GKPNEAKEILNRMIAS-GCLPNAYTYS----SLMKGFFKTGLCEEAVQVWKEMDKTGCSR 465
Query: 203 --------------------------QMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVF 236
+M +G+ PDT + IIK +D A++++
Sbjct: 466 NKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLY 525
Query: 237 HEMGLY---GCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVI----- 288
HEM +P+ +Y+ + GLC + +++ + M ++ P T
Sbjct: 526 HEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTL 585
Query: 289 ----------------IVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRER 332
+V L +R A ++ MLG +P T+ ++ +C+ +
Sbjct: 586 SEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPK 645
Query: 333 RADEAFD 339
+ + A D
Sbjct: 646 KINAAID 652
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 131/288 (45%), Gaps = 11/288 (3%)
Query: 76 SDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPL 135
D LALD+ R ++R+ Y TII L A +L +E+ S+
Sbjct: 207 GDTSLALDLLR-KMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 136 YNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLH 195
YNS++R C A + K + S + P++ T+ +L + ++ L
Sbjct: 266 YNSLVRGLCKAGKWNDGALLL--KDMVSREIVPNVITFNVLLDVFVKEGK--------LQ 315
Query: 196 AVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIA 255
L K+M G+ P+ N ++ Y + EA + M C P+ +++ +
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Query: 256 RGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRS 315
+G C RV+ G+ ++ + ++ L + TY I+V + + A E+ +M+ +
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Query: 316 PDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
PD +TY +L+GLC + ++A ++ ++ +K + + MY T+++ +
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 121/268 (45%), Gaps = 10/268 (3%)
Query: 93 SYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSR 152
Y + T+IK L + +A LV+ ++ C + YNSI+ C R S
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC-RSGDTSL 211
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPD 212
A D+ KM + K D+ TY+ + +SL R C + A SL K+M+ G+
Sbjct: 212 ALDLLRKM-EERNVKADVFTYSTIIDSLCR-----DGC---IDAAISLFKEMETKGIKSS 262
Query: 213 TFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
N +++ K + ++ + +M PN +++ + ++G++ + YK
Sbjct: 263 VVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYK 322
Query: 273 EMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRER 332
EM + + P+ TY ++ M R +A +L M+ N SPD +T+ ++++G C +
Sbjct: 323 EMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVK 382
Query: 333 RADEAFDLLDECKKRDISMSEKMYKTLL 360
R D+ + KR + + Y L+
Sbjct: 383 RVDDGMKVFRNISKRGLVANAVTYSILV 410
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 126/248 (50%), Gaps = 10/248 (4%)
Query: 113 RYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLET 172
+ Q+A L +E+I +I YN+++ C + L S A ++ + M+R++ C PD+ T
Sbjct: 313 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL-SEANNMLDLMVRNK-CSPDIVT 370
Query: 173 YTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEA 232
+T SL++ + + + R+++K+ G++ + +++++ + + ++ A
Sbjct: 371 FT----SLIKGYCMVKRVDDGMKVFRNISKR----GLVANAVTYSILVQGFCQSGKIKLA 422
Query: 233 IRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCS 292
+F EM +G P+ +Y + GLC+ G++ + L ++++++ + Y I+
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 482
Query: 293 LAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMS 352
+ + EDA + + P+ +TY ++ GLC++ EA LL + ++ + +
Sbjct: 483 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 542
Query: 353 EKMYKTLL 360
+ Y TL+
Sbjct: 543 DCTYNTLI 550
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 5/172 (2%)
Query: 190 CYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAY 249
C+ Y S+ ++ +G PDT N +IK +V EA+ + M GC+P+
Sbjct: 140 CFAY-----SVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVV 194
Query: 250 SYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDM 309
+Y+ I G+C G + L ++M+E+ ++ TY I+ SL D + AI + +M
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254
Query: 310 LGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
+TY +++ GLC+ + ++ LL + R+I + + LLD
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 100/213 (46%), Gaps = 13/213 (6%)
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSLLR--RFNKLHVCYVYLHAVRSLTKQMKAVGVI 210
A ++ +M+RS P L ++ ++++ R +FN V KQ++ G+
Sbjct: 72 AIALFQEMIRSRPL-PSLVDFSRFFSAIARTKQFN----------LVLDFCKQLELNGIA 120
Query: 211 PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGF 270
+ + LN++I + +C + A V ++ G EP+ +++ + +GL +G+V++ +
Sbjct: 121 HNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVL 180
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
M E +P TY IV + A+++L M + D TY T+++ LCR
Sbjct: 181 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 240
Query: 331 ERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+ D A L E + + I S Y +L+ L
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 13/219 (5%)
Query: 143 CCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTK 202
CC F A+ V K+++ +PD T+ L L K+ V L
Sbjct: 136 CCKTCF----AYSVLGKVMKL-GYEPDTTTFNTLIKGLFLE-GKVSEAVV-------LVD 182
Query: 203 QMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKG 262
+M G PD N I+ + + A+ + +M + + ++YS I LC G
Sbjct: 183 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 242
Query: 263 RVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYK 322
++ + +KEM+ K ++ S TY +V L ++ D +L DM+ P+ +T+
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302
Query: 323 TVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
+L+ +E + EA +L E R IS + Y TL+D
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 341
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 120/253 (47%), Gaps = 16/253 (6%)
Query: 111 GRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFD---VYNKMLRSEDCK 167
G+R A LV++++ + ++I FL ++A + + ++M++ C+
Sbjct: 93 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGL----FLHNKASEAVALVDRMVQ-RGCQ 147
Query: 168 PDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCL 227
P+L TY ++ N L +R + + +L +M+A + D + N II + K
Sbjct: 148 PNLVTYGVVVNGLCKRGD--------IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 199
Query: 228 EVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYV 287
VD+A+ +F EM G PN +YS + LC GR + +M EK + P+ T+
Sbjct: 200 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 259
Query: 288 IIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKR 347
++ + + +F +A ++ DM+ S PD TY +++ G C R D+A + + +
Sbjct: 260 ALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 319
Query: 348 DISMSEKMYKTLL 360
D Y TL+
Sbjct: 320 DCFPDLDTYNTLI 332
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 127/270 (47%), Gaps = 10/270 (3%)
Query: 91 QRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLF 150
++ N + + +I ++ +AE L +++I + D I YNS+I C L
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL- 306
Query: 151 SRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVI 210
+A ++ M+ S+DC PDL+TY N+L++ F K + L ++M G++
Sbjct: 307 DKAKQMFEFMV-SKDCFPDLDTY----NTLIKGFCKSK----RVEDGTELFREMSHRGLV 357
Query: 211 PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGF 270
DT +I+ + D A +VF +M G P+ +YS + GLC G++ + L
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
+ M++ ++ Y ++ + + +D ++ + P+ +TY T++ GLC
Sbjct: 418 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 477
Query: 331 ERRADEAFDLLDECKKRDISMSEKMYKTLL 360
+R EA+ LL + K+ Y TL+
Sbjct: 478 KRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 125/263 (47%), Gaps = 14/263 (5%)
Query: 103 TIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCC--GRKFLFSRAFDVYNKM 160
TII L R A L +E+ ++ Y+S+I C GR +S A + + M
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR---WSDASQLLSDM 246
Query: 161 LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMII 220
+ + P+L T+ L ++ ++ ++ A + L M + PD F N +I
Sbjct: 247 IEKK-INPNLVTFNALIDAFVKEGK-------FVEAEK-LHDDMIKRSIDPDIFTYNSLI 297
Query: 221 KAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLR 280
+ +D+A ++F M C P+ +Y+ + +G C+ RV G ++EM + L
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Query: 281 PSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDL 340
T TY ++ L D ++A +V M+ + PD +TY +L+GLC + ++A ++
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417
Query: 341 LDECKKRDISMSEKMYKTLLDDL 363
D +K +I + +Y T+++ +
Sbjct: 418 FDYMQKSEIKLDIYIYTTMIEGM 440
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 133/287 (46%), Gaps = 15/287 (5%)
Query: 79 DLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNS 138
D AL++F+ + + + Y ++I L + R+ A L+ ++I + ++ +N+
Sbjct: 202 DDALNLFK-EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 260
Query: 139 II-RFCCGRKFLFSRAFDVYNKML-RSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHA 196
+I F KF+ A +++ M+ RS D PD+ TY NSL+ F + L
Sbjct: 261 LIDAFVKEGKFV--EAEKLHDDMIKRSID--PDIFTY----NSLINGF----CMHDRLDK 308
Query: 197 VRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIAR 256
+ + + M + PD N +IK + K V++ +F EM G + +Y+ + +
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Query: 257 GLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSP 316
GL G + +K+M + P TY I++ L + + E A+EV M +
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428
Query: 317 DHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
D Y T++EG+C+ + D+ +DL + + + Y T++ L
Sbjct: 429 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 475
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 92/187 (49%), Gaps = 4/187 (2%)
Query: 177 YNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVF 236
+N LL K+ V SL ++M+ +G+ + + N++I + + ++ A+ +
Sbjct: 13 FNKLLSAIAKMK----KFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68
Query: 237 HEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMD 296
+M G EP+ + S + G C R++ + +M E RP T T+ ++ L +
Sbjct: 69 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128
Query: 297 RRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMY 356
+ +A+ ++ M+ P+ +TY V+ GLC+ D AF+LL++ + I ++
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 188
Query: 357 KTLLDDL 363
T++D L
Sbjct: 189 NTIIDSL 195
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 108/266 (40%), Gaps = 55/266 (20%)
Query: 136 YNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLH 195
YN +I C R+ S A + KM++ +P + T + L N Y H
Sbjct: 48 YNILINCFC-RRSQISLALALLGKMMKL-GYEPSIVTLSSLLNG-------------YCH 92
Query: 196 AVR-----SLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYS 250
R +L QM +G PDT +I + EA+ + M GC+PN +
Sbjct: 93 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 152
Query: 251 YSYIARGLCEKG-----------------------------------RVNQGLGFYKEMK 275
Y + GLC++G V+ L +KEM+
Sbjct: 153 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 212
Query: 276 EKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRAD 335
K +RP+ TY ++ L R+ DA ++L DM+ +P+ +T+ +++ +E +
Sbjct: 213 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272
Query: 336 EAFDLLDECKKRDISMSEKMYKTLLD 361
EA L D+ KR I Y +L++
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLIN 298
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 84/192 (43%), Gaps = 8/192 (4%)
Query: 169 DLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLE 228
+L TY +L N RR + +L +M +G P L+ ++ Y
Sbjct: 44 NLYTYNILINCFCRRSQ--------ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 95
Query: 229 VDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVI 288
+ +A+ + +M G P+ +++ + GL + ++ + M ++ +P+ TY +
Sbjct: 96 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 155
Query: 289 IVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRD 348
+V L + A +L M D + + T+++ LC+ R D+A +L E + +
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215
Query: 349 ISMSEKMYKTLL 360
I + Y +L+
Sbjct: 216 IRPNVVTYSSLI 227
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 70/154 (45%)
Query: 210 IPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLG 269
+P F N ++ A +K + D I + +M G N Y+Y+ + C + +++ L
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 270 FYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLC 329
+M + PS T ++ +R DA+ ++ M+ PD +T+ T++ GL
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 330 RERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+A EA L+D +R + Y +++ L
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 160
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 120/263 (45%), Gaps = 14/263 (5%)
Query: 103 TIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSII-RFCCGRKFLFSRA-FDVYNKM 160
++++ L + ++A LV+ V+ ++ +YN++I C GRKF + FD K+
Sbjct: 337 SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKI 396
Query: 161 LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMII 220
+P+ TY++L + RR L S +M G+ + N +I
Sbjct: 397 ----GLRPNDVTYSILIDMFCRRGK--------LDTALSFLGEMVDTGLKLSVYPYNSLI 444
Query: 221 KAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLR 280
+ K ++ A EM EP +Y+ + G C KG++N+ L Y EM K +
Sbjct: 445 NGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA 504
Query: 281 PSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDL 340
PS T+ ++ L DA+++ +M + P+ +TY ++EG C E +AF+
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 341 LDECKKRDISMSEKMYKTLLDDL 363
L E ++ I Y+ L+ L
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGL 587
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 140/311 (45%), Gaps = 30/311 (9%)
Query: 72 LTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDG 131
+ ++ DP L L F + R ++H+ ++ +I L + A +L++ ++ A
Sbjct: 78 IGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKP 137
Query: 132 SIPLYNSIIRFCCGRK--FLFSRAFD-----------------VYNKMLRSEDCKPDLET 172
S ++N + F C K S +FD V+ M+ P++ T
Sbjct: 138 S-DVFN--VLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRT 194
Query: 173 YTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEA 232
+ L + L++ + + L M +VG+ PD ++ +I++ + ++ A
Sbjct: 195 LSALLHGLVK--------FRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRA 246
Query: 233 IRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCS 292
+ M GC+ N Y+ + GLC+K +V + +G K++ K L+P TY +V
Sbjct: 247 KEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYG 306
Query: 293 LAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMS 352
L + FE +E++ +ML SP +++EGL + + +EA +L+ +S +
Sbjct: 307 LCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPN 366
Query: 353 EKMYKTLLDDL 363
+Y L+D L
Sbjct: 367 LFVYNALIDSL 377
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 125/266 (46%), Gaps = 14/266 (5%)
Query: 98 DLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVY 157
D+ Y +I + A + + E++ S+ YNS+I C KF A + +
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHC--KFGDISAAEGF 459
Query: 158 NKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLN 217
+ ++ +P + TYT L + K++ A+R L +M G+ P +
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSK-GKIN------KALR-LYHEMTGKGIAPSIYTFT 511
Query: 218 MIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEK 277
++ + + +A+++F+EM + +PN +Y+ + G CE+G +++ F KEM EK
Sbjct: 512 TLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK 571
Query: 278 CLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDML--GNSRSPDHLTYKTVLEGLCRERRAD 335
+ P T +Y ++ L + + +A +V D L GN + + Y +L G CRE + +
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCEL-NEICYTGLLHGFCREGKLE 629
Query: 336 EAFDLLDECKKRDISMSEKMYKTLLD 361
EA + E +R + + Y L+D
Sbjct: 630 EALSVCQEMVQRGVDLDLVCYGVLID 655
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 117/269 (43%), Gaps = 20/269 (7%)
Query: 100 NYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNK 159
+Y +I L + +A+ V+ + G C+ + Y ++ C R+ A V +
Sbjct: 579 SYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFC-REGKLEEALSVCQE 637
Query: 160 MLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMI 219
M++ DL Y +L + L+ ++ L K+M G+ PD + +
Sbjct: 638 MVQ-RGVDLDLVCYGVLIDGSLKHKDR--------KLFFGLLKEMHDRGLKPDDVIYTSM 688
Query: 220 IKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCL 279
I A SK + EA ++ M GC PN +Y+ + GLC+ G VN+ +M+
Sbjct: 689 IDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSS 748
Query: 280 RPSTSTY-----VIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRA 334
P+ TY ++ + M + E +L +L N+ TY ++ G CR+ R
Sbjct: 749 VPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTA-----TYNMLIRGFCRQGRI 803
Query: 335 DEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+EA +L+ +S Y T++++L
Sbjct: 804 EEASELITRMIGDGVSPDCITYTTMINEL 832
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 11/210 (5%)
Query: 150 FSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGV 209
F AF +++ M+ +E C P+ TYT + N L + +++ L +M+ V
Sbjct: 698 FKEAFGIWDLMI-NEGCVPNEVTYTAVINGLCKAG--------FVNEAEVLCSKMQPVSS 748
Query: 210 IPDTFVLNMIIKAYSKCLEVDEAIRV-FHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGL 268
+P+ + +K EVD V H L G N +Y+ + RG C +GR+ +
Sbjct: 749 VPNQVTYGCFLDILTKG-EVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEAS 807
Query: 269 GFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGL 328
M + P TY ++ L + AIE+ M PD + Y T++ G
Sbjct: 808 ELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGC 867
Query: 329 CRERRADEAFDLLDECKKRDISMSEKMYKT 358
C +A +L +E ++ + + K +T
Sbjct: 868 CVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 110/245 (44%), Gaps = 10/245 (4%)
Query: 117 AETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLL 176
AE + E+I + ++ Y S++ C + + ++A +Y++M + P + T+T L
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI-NKALRLYHEM-TGKGIAPSIYTFTTL 513
Query: 177 YNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVF 236
+ L R + AV+ L +M V P+ N++I+ Y + ++ +A
Sbjct: 514 LSGLFR-------AGLIRDAVK-LFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFL 565
Query: 237 HEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMD 296
EM G P+ YSY + GLC G+ ++ F + + + Y ++ +
Sbjct: 566 KEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCRE 625
Query: 297 RRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMY 356
+ E+A+ V +M+ D + Y +++G + + F LL E R + + +Y
Sbjct: 626 GKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIY 685
Query: 357 KTLLD 361
+++D
Sbjct: 686 TSMID 690
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 114/262 (43%), Gaps = 14/262 (5%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKM 160
Y +I+ L + +A+ ++ + A CD +I YN +I C ++ ++ K
Sbjct: 230 YTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVG--IKKD 287
Query: 161 LRSEDCKPDLETY-TLLYNSLLRRFNKLHVCYVYLHAVR-SLTKQMKAVGVIPDTFVLNM 218
L +D KPD+ TY TL+Y +C V + + +M + P ++
Sbjct: 288 LAGKDLKPDVVTYCTLVYG----------LCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS 337
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
+++ K +++EA+ + + +G PN + Y+ + LC+ + ++ + M +
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
LRP+ TY I++ + + A+ L +M+ Y +++ G C+ A
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 339 DLLDECKKRDISMSEKMYKTLL 360
+ E + + + Y +L+
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLM 479
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 123/298 (41%), Gaps = 45/298 (15%)
Query: 64 TPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEE 123
TPS V L +D +A F W +Q+ Y H
Sbjct: 124 TPSIVAEVLKLGNDAAVAAKFFHWAGKQKGYKH--------------------------- 156
Query: 124 VIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRR 183
YN+ +C R F RA D +++ S+ P + + +L
Sbjct: 157 --------DFAAYNAFA-YCLNRNGHF-RAADQLPELMDSQGRPPSEKQFEILIRMHADN 206
Query: 184 FNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYG 243
L V YVY ++MK G P F+ N I+ A K D A+ V+ + G
Sbjct: 207 RRGLRVYYVY--------EKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDG 258
Query: 244 CEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAI 303
+ ++ + +GLC+ GR+ + L + M+E +P Y ++ +L + + ++
Sbjct: 259 LVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASL 318
Query: 304 EVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
V +M + PD + Y T++ GLC++ R + ++L E K + I + ++Y+ L++
Sbjct: 319 RVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIE 376
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 128/290 (44%), Gaps = 29/290 (10%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKM 160
Y +I+ A + + A L E+++ I +YN++I+ C + +A+ ++
Sbjct: 371 YRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQV-DKAYKLFQVA 429
Query: 161 LRSEDCKPDLETYTLL------------YNSLLRRFNKLH--VCYVYLHAVRSLTKQMKA 206
+ E+ +PD ET + + ++++L R +L V + L +
Sbjct: 430 IE-EELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEK 488
Query: 207 VGVIPDTF------------VLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYI 254
+ D F V N++++A K ++ +++ +F+EM G EP++ SYS
Sbjct: 489 NAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIA 548
Query: 255 ARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSR 314
EKG V F++++ E PS + Y+ + L + + ++ + LGN
Sbjct: 549 ICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVE 608
Query: 315 S-PDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
S P Y + +C+ A++ ++DE + + ++E +Y ++ +
Sbjct: 609 SGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGM 658
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 141/340 (41%), Gaps = 41/340 (12%)
Query: 48 LEKQFETWVNHLKPGFTPSDVDRALTSVS-DPDLALDIFRWTAQQRSYNHTDLNYLTIIK 106
+EKQ + + P+++ R L S DPDL L + W + + + ++
Sbjct: 50 IEKQHWSKLGVHVTDINPNELFRQLISSELDPDLCLRYYSWLVKNSDISVSLELTFKLLH 109
Query: 107 QLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFC---CGRKFL-------------F 150
L +RY + + ++ + D + I C C + F
Sbjct: 110 SLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRF 169
Query: 151 SRAFDVYNK------MLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQM 204
F+ + + L + CKP L +LL+ V YVY K+M
Sbjct: 170 ELGFEAFKRSGYYGYKLSALSCKP-------LMIALLKENRSADVEYVY--------KEM 214
Query: 205 KAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCE---K 261
+ P+ F N++I A K ++++A V +M +YGC PN SY+ + G C+
Sbjct: 215 IRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGN 274
Query: 262 GRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTY 321
G++ + KEM E + P+ +T+ I++ D +++V +ML P+ ++Y
Sbjct: 275 GKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISY 334
Query: 322 KTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
+++ GLC + EA + D+ + + Y L++
Sbjct: 335 NSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALIN 374
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 14/227 (6%)
Query: 136 YNSIIR-FCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYL 194
YNS+I C G K S A + +KM+ S +P+L TY L N + N + L
Sbjct: 334 YNSLINGLCNGGKI--SEAISMRDKMV-SAGVQPNLITYNALINGFCK--NDM------L 382
Query: 195 HAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYI 254
+ +K G +P T + NM+I AY K ++D+ + EM G P+ +Y+ +
Sbjct: 383 KEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442
Query: 255 ARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSR 314
GLC G + + ++ K L P T+ I++ A +L +M
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGL 501
Query: 315 SPDHLTYKTVLEGLCRERRADEAFDLLDEC-KKRDISMSEKMYKTLL 360
P HLTY V++G C+E A ++ + K+R + M+ Y LL
Sbjct: 502 KPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLL 548
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 117/256 (45%), Gaps = 10/256 (3%)
Query: 113 RYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLET 172
R E + +E+I ++ +N +I C + ++A DV M + C P++ +
Sbjct: 203 RSADVEYVYKEMIRRKIQPNVFTFNVVINALC-KTGKMNKARDVMEDM-KVYGCSPNVVS 260
Query: 173 YTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEA 232
Y N+L+ + KL ++ ++ K+M V P+ N++I + K + +
Sbjct: 261 Y----NTLIDGYCKLG-GNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGS 315
Query: 233 IRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCS 292
++VF EM +PN SY+ + GLC G++++ + +M ++P+ TY ++
Sbjct: 316 MKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALING 375
Query: 293 LAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMS 352
+ ++A+++ + G P Y +++ C+ + D+ F L +E ++ I
Sbjct: 376 FCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPD 435
Query: 353 EKMYKTLLDDLHYVCR 368
Y L+ L CR
Sbjct: 436 VGTYNCLIAGL---CR 448
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 118/274 (43%), Gaps = 48/274 (17%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFL--------- 149
++Y ++I L G + +A ++ +++++ ++ YN++I C L
Sbjct: 332 ISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGS 391
Query: 150 ------------FSRAFDVYNKM------------LRSEDCKPDLETYTLLYNSLLRRFN 185
++ D Y K+ + E PD+ TY L L R N
Sbjct: 392 VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN 451
Query: 186 KLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCE 245
+ A + L Q+ + G +PD +++++ Y + E +A + EM G +
Sbjct: 452 --------IEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 502
Query: 246 PNAYSYSYIARGLCEKGRVNQGLGFYKEM-KEKCLRPSTSTYVIIVCSLAMDRRFEDAIE 304
P +Y+ + +G C++G + +M KE+ LR + ++Y +++ + + EDA
Sbjct: 503 PRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANM 562
Query: 305 VLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
+L +ML P+ +TY+ V +E D+ F
Sbjct: 563 LLNEMLEKGLVPNRITYEIV-----KEEMVDQGF 591
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 107/249 (42%), Gaps = 11/249 (4%)
Query: 103 TIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCC--GRKFLFSRAFDVYNKM 160
+I L + +A ++E++ C ++ YN++I C G +A V +M
Sbjct: 228 VVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEM 287
Query: 161 LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMII 220
+ + D P+L T+ +L + + N L + K+M V P+ N +I
Sbjct: 288 VEN-DVSPNLTTFNILIDGFWKDDN--------LPGSMKVFKEMLDQDVKPNVISYNSLI 338
Query: 221 KAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLR 280
++ EAI + +M G +PN +Y+ + G C+ + + L + +K +
Sbjct: 339 NGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV 398
Query: 281 PSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDL 340
P+T Y +++ + + +D + +M PD TY ++ GLCR + A L
Sbjct: 399 PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKL 458
Query: 341 LDECKKRDI 349
D+ + +
Sbjct: 459 FDQLTSKGL 467
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 140/345 (40%), Gaps = 42/345 (12%)
Query: 59 LKPGFTPSDVD-----RALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRR 113
++ GF P++V + LA+++ R ++R+ + Y II L
Sbjct: 220 VETGFQPNEVTYGPVLNVMCKSGQTALAMELLR-KMEERNIKLDAVKYSIIIDGLCKDGS 278
Query: 114 YQQAETLVEEVIAGACDGSIPLYNSIIRFCC-------GRKFL--------------FSR 152
A L E+ I YN++I C G K L FS
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 153 AFDVYNK--------MLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQM 204
D + K L E + + T+ YNSL+ F K + L + M
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKEN----RLEEAIQMVDLM 394
Query: 205 KAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRV 264
+ G PD N++I Y K +D+ + +F EM L G N +Y+ + +G C+ G++
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 265 NQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTV 324
++EM + +RP +Y I++ L + E A+E+ + + D Y +
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMII 514
Query: 325 LEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCRE 369
+ G+C + D+A+DL + + + + Y ++ +L CR+
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISEL---CRK 556
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 128/285 (44%), Gaps = 15/285 (5%)
Query: 79 DLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNS 138
D A+D+FR Q R T +++ + + ++Y+ L +++ + SI +
Sbjct: 70 DDAVDLFRDMIQSRPL-PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 139 IIR-FCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHV-CYVYLHA 196
+I FC RK S AF K++ K E T+++N+LL N L + C V
Sbjct: 129 MINCFCRCRKL--SYAFSTMGKIM-----KLGYEPDTVIFNTLL---NGLCLECRV--SE 176
Query: 197 VRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIAR 256
L +M +G P LN ++ +V +A+ + M G +PN +Y +
Sbjct: 177 ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN 236
Query: 257 GLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSP 316
+C+ G+ + ++M+E+ ++ Y II+ L D ++A + +M
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 296
Query: 317 DHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
D +TY T++ G C R D+ LL + KR IS + + L+D
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLID 341
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 86/167 (51%)
Query: 197 VRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIAR 256
V +L KQM++ G+ + L+++I + +C ++ A ++ G EP+ ++ +
Sbjct: 107 VLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLN 166
Query: 257 GLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSP 316
GLC + RV++ L M E +P+ T +V L ++ + DA+ ++ M+ P
Sbjct: 167 GLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQP 226
Query: 317 DHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+ +TY VL +C+ + A +LL + ++R+I + Y ++D L
Sbjct: 227 NEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 111/252 (44%), Gaps = 20/252 (7%)
Query: 91 QRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLF 150
+R + + + +I + ++A+ L++E++ + YNS+I C L
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL- 384
Query: 151 SRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVR-----SLTKQMK 205
A + + M+ S+ C PD+ T+ +L N Y A R L ++M
Sbjct: 385 EEAIQMVDLMI-SKGCDPDIMTFNILING-------------YCKANRIDDGLELFREMS 430
Query: 206 AVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVN 265
GVI +T N +++ + + +++ A ++F EM P+ SY + GLC+ G +
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELE 490
Query: 266 QGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVL 325
+ L + ++++ + Y+II+ + + +DA ++ + D Y ++
Sbjct: 491 KALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMI 550
Query: 326 EGLCRERRADEA 337
LCR+ +A
Sbjct: 551 SELCRKDSLSKA 562
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 92/175 (52%), Gaps = 4/175 (2%)
Query: 174 TLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAI 233
T+ YN+L+R L L V L ++ G+ P+ F + +++A K DEA+
Sbjct: 176 TVTYNALVRGLCMLGSLNQSLQFVERLMQK----GLAPNAFTYSFLLEAAYKERGTDEAV 231
Query: 234 RVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSL 293
++ E+ + G EPN SY+ + G C++GR + + ++E+ K + + +Y I++ L
Sbjct: 232 KLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCL 291
Query: 294 AMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRD 348
D R+E+A +L +M G R+P +TY ++ L R ++A +L E K +
Sbjct: 292 CCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGN 346
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 99/195 (50%), Gaps = 10/195 (5%)
Query: 167 KPDLETYT-LLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSK 225
KP++ T LLY+ L + N+L A+R + + M + G+IPD ++ K
Sbjct: 103 KPNVAHSTQLLYD--LCKANRLK------KAIR-VIELMVSSGIIPDASAYTYLVNQLCK 153
Query: 226 CLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTST 285
V A+++ +M +G N +Y+ + RGLC G +NQ L F + + +K L P+ T
Sbjct: 154 RGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFT 213
Query: 286 YVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECK 345
Y ++ + +R ++A+++L +++ P+ ++Y +L G C+E R D+A L E
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELP 273
Query: 346 KRDISMSEKMYKTLL 360
+ + Y LL
Sbjct: 274 AKGFKANVVSYNILL 288
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 120/258 (46%), Gaps = 21/258 (8%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPL--YNSIIRFCC--GRKFLFSRAF 154
+ Y +I L R +QA +++E+ G + YN +I C G+ L +
Sbjct: 317 VTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCL 376
Query: 155 D--VYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPD 212
D +Y + CKP+ TY + SL +K+ + + ++SL+ + K D
Sbjct: 377 DEMIYRR------CKPNEGTYNAI-GSLCEHNSKVQEAF---YIIQSLSNKQKCC--THD 424
Query: 213 TFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
+ +I + + A ++ +EM G +P+A++YS + RGLC +G +
Sbjct: 425 FY--KSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLS 482
Query: 273 EMKE-KCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRE 331
M+E + +P+ + ++ L RR + A+EV M+ R P+ TY ++EG+ E
Sbjct: 483 IMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHE 542
Query: 332 RRADEAFDLLDECKKRDI 349
+ A ++LDE + R +
Sbjct: 543 DELELAKEVLDELRLRKV 560
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 108/256 (42%), Gaps = 16/256 (6%)
Query: 112 RRYQQAETLVEEVIAGACDGSIPLYNSIIRFCC--GRKFLFSRAFDVYNKMLRSEDCKPD 169
R +A L++E+I + ++ YN ++ C GR A ++ + L ++ K +
Sbjct: 225 RGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRT---DDAMALFRE-LPAKGFKAN 280
Query: 170 LETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEV 229
+ +Y +L L C SL +M P N++I + +
Sbjct: 281 VVSYNILLRCL--------CCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRT 332
Query: 230 DEAIRVFHEM--GLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYV 287
++A++V EM G + A SY+ + LC++G+V+ + EM + +P+ TY
Sbjct: 333 EQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYN 392
Query: 288 IIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKR 347
I + + ++A ++ + + H YK+V+ LCR+ AF LL E +
Sbjct: 393 AIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRC 452
Query: 348 DISMSEKMYKTLLDDL 363
Y L+ L
Sbjct: 453 GFDPDAHTYSALIRGL 468
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 99/234 (42%), Gaps = 18/234 (7%)
Query: 113 RYQQAETLVEEVIAGACDGSIPLYNSIIR-FCC-GRKFLFSRAFDVYNKMLRSEDCKPDL 170
R A L E+ A ++ YN ++R CC GR + A + +M D P +
Sbjct: 261 RTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGR---WEEANSLLAEM-DGGDRAPSV 316
Query: 171 ETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVD 230
TY +L NSL L ++ ++K V ++ N +I K +VD
Sbjct: 317 VTYNILINSLAFHGRTEQA----LQVLKEMSKGNHQFRVTATSY--NPVIARLCKEGKVD 370
Query: 231 EAIRVFHEMGLYGCEPNAYSYSYIARGLCE-KGRVNQGLGFYKEM--KEKCLRPSTSTYV 287
++ EM C+PN +Y+ I LCE +V + + + K+KC + Y
Sbjct: 371 LVVKCLDEMIYRRCKPNEGTYNAIG-SLCEHNSKVQEAFYIIQSLSNKQKCC--THDFYK 427
Query: 288 IIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLL 341
++ SL A ++L++M PD TY ++ GLC E A ++L
Sbjct: 428 SVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVL 481
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 117/250 (46%), Gaps = 10/250 (4%)
Query: 111 GRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDL 170
G R A +LV +++ +N++I R S A + ++M+ + C+PDL
Sbjct: 164 GNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLF-RHNRASEAVALVDRMV-VKGCQPDL 221
Query: 171 ETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVD 230
TY ++ N L +R + + SL K+M+ + P + N II A V+
Sbjct: 222 VTYGIVVNGLCKRGD--------IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVN 273
Query: 231 EAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIV 290
+A+ +F EM G PN +Y+ + R LC GR + +M E+ + P+ T+ ++
Sbjct: 274 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 333
Query: 291 CSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDIS 350
+ + + +A ++ +M+ S PD TY +++ G C R DEA + + +D
Sbjct: 334 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 393
Query: 351 MSEKMYKTLL 360
+ Y TL+
Sbjct: 394 PNVVTYNTLI 403
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 123/270 (45%), Gaps = 10/270 (3%)
Query: 91 QRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLF 150
+R N + + +I + +AE L +E+I + D I Y+S+I C L
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL- 377
Query: 151 SRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVI 210
A ++ M+ S+DC P++ TY N+L++ F K + L ++M G++
Sbjct: 378 DEAKHMFELMI-SKDCFPNVVTY----NTLIKGFCKAK----RVDEGMELFREMSQRGLV 428
Query: 211 PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGF 270
+T +I + + E D A VF +M G P+ +YS + GLC G+V L
Sbjct: 429 GNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVV 488
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
++ ++ + P TY I++ + + ED ++ + P+ +TY T++ G CR
Sbjct: 489 FEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548
Query: 331 ERRADEAFDLLDECKKRDISMSEKMYKTLL 360
+ +EA L E K+ Y TL+
Sbjct: 549 KGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 11/225 (4%)
Query: 138 SIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVY-LHA 196
SI+ C R+ S A V KM++ +PD+ T NSLL F C+ +
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKL-GYEPDIVTL----NSLLNGF-----CHGNRISD 169
Query: 197 VRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIAR 256
SL QM +G PD+F N +I + EA+ + M + GC+P+ +Y +
Sbjct: 170 AVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVN 229
Query: 257 GLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSP 316
GLC++G ++ L K+M++ + P Y I+ +L + DA+ + +M P
Sbjct: 230 GLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289
Query: 317 DHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
+ +TY +++ LC R +A LL + +R I+ + + L+D
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 334
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 15/273 (5%)
Query: 68 VDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAG 127
V L D DLAL + + Q + + Y TII L + A L E+
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI-YNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 128 ACDGSIPLYNSIIRFCC--GRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFN 185
++ YNS+IR C GR +S A + + M+ + P++ T++ L ++ ++
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGR---WSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGK 341
Query: 186 KLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCE 245
L L +M + PD F + +I + +DEA +F M C
Sbjct: 342 --------LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 393
Query: 246 PNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEV 305
PN +Y+ + +G C+ RV++G+ ++EM ++ L +T TY ++ R ++A V
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453
Query: 306 LFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
M+ + PD +TY +L+GLC + + A
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL 486
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 101/211 (47%), Gaps = 9/211 (4%)
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPD 212
A +++ M++S +E LL S + + NK + V SL +QM+ +G+ +
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLL--SAIAKMNKFDL-------VISLGEQMQNLGISHN 115
Query: 213 TFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
+ +++I + + ++ A+ V +M G EP+ + + + G C R++ +
Sbjct: 116 LYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVG 175
Query: 273 EMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRER 332
+M E +P + T+ ++ L R +A+ ++ M+ PD +TY V+ GLC+
Sbjct: 176 QMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRG 235
Query: 333 RADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
D A LL + ++ I +Y T++D L
Sbjct: 236 DIDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 116/255 (45%), Gaps = 10/255 (3%)
Query: 91 QRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLF 150
+RS + Y ++I R +A+ + E +I+ C ++ YN++I+ C K +
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV- 412
Query: 151 SRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVI 210
+++ +M + L T+ Y +L+ F + C + + KQM + GV+
Sbjct: 413 DEGMELFREM-----SQRGLVGNTVTYTTLIHGFFQAREC----DNAQIVFKQMVSDGVL 463
Query: 211 PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGF 270
PD ++++ +V+ A+ VF + EP+ Y+Y+ + G+C+ G+V G
Sbjct: 464 PDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
+ + K ++P+ TY ++ E+A + +M PD TY T++ R
Sbjct: 524 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583
Query: 331 ERRADEAFDLLDECK 345
+ + +L+ E +
Sbjct: 584 DGDKAASAELIREMR 598
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 113/254 (44%), Gaps = 31/254 (12%)
Query: 138 SIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLR--------------- 182
S+I GR+ LFS DV M+ E PDLE T+ +S +R
Sbjct: 155 SVILRALGRRKLFSFMMDVLKGMV-CEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESE 213
Query: 183 ---------RFNKLHVCYV---YLHAVRSLTKQMKAVGVIP-DTFVLNMIIKAYSKCLEV 229
FN L C ++ A +S+ K G IP D+ N++I +SK EV
Sbjct: 214 SFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKK--GNIPFDSCSYNIMISGWSKLGEV 271
Query: 230 DEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVII 289
+E +V EM G P+ SYS++ GL GR+N + + +K K P + Y +
Sbjct: 272 EEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAM 331
Query: 290 VCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDI 349
+C+ R F++++ ML P+ TY ++ GL + R+ +A ++ +E R +
Sbjct: 332 ICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGV 391
Query: 350 SMSEKMYKTLLDDL 363
+ + + L L
Sbjct: 392 LPTTGLVTSFLKPL 405
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 99/223 (44%), Gaps = 21/223 (9%)
Query: 131 GSIP---LYNSIIRFCCGRKFLFSRAFD----VYNKMLRSEDCKPDLETYTLLYNSLLRR 183
G++P +YN++I C F+ +R FD Y +ML E+C+P+LETY+ L + L++
Sbjct: 320 GNVPDANVYNAMI---C--NFISARDFDESMRYYRRML-DEECEPNLETYSKLVSGLIKG 373
Query: 184 FNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYG 243
++ ++M + GV+P T ++ +K A+ ++ + G
Sbjct: 374 RKVSDALEIF--------EEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAG 425
Query: 244 CEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAI 303
C + +Y + + L G+ L + EM+E Y IV L + E+A+
Sbjct: 426 CRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAV 485
Query: 304 EVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKK 346
V+ + + P+ Y + L + + A+ L + KK
Sbjct: 486 LVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKK 528
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 132/292 (45%), Gaps = 33/292 (11%)
Query: 70 RALTSVSDPDL----------------ALDIFRWTAQQRSY-NHTDLN-YLTIIKQLNAG 111
RA +SVS DL A+D+F + R + + D N L+ I +L
Sbjct: 42 RASSSVSGGDLRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKL--- 98
Query: 112 RRYQQAETLVEEVIAGACDGSIPLYNSIIR-FCCGRKFLFSRAFDVYNKMLRSEDCKPDL 170
++Y +L +++ + +N +I FCC F S A + KML+ +PD
Sbjct: 99 KKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCC--FQVSLALSILGKMLKL-GYEPDR 155
Query: 171 ETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVD 230
T L N RR N++ AV SL +M +G PD N II + K V+
Sbjct: 156 VTIGSLVNGFCRR-NRVS------DAV-SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 231 EAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIV 290
+A F E+ G PN +Y+ + GLC R + +M +K + P+ TY ++
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 291 CSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLD 342
+ + + +A E+ +M+ S PD +TY +++ GLC R DEA + D
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD 319
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 9/216 (4%)
Query: 146 RKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMK 205
R + A D+++ M++S ++ +N LL KL V SL K+M+
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVD-----FNRLLSAIVKLK----KYDVVISLGKKME 112
Query: 206 AVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVN 265
+G+ D + N++I + C +V A+ + +M G EP+ + + G C + RV+
Sbjct: 113 VLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVS 172
Query: 266 QGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVL 325
+ +M E +P Y I+ SL +R DA + ++ P+ +TY ++
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232
Query: 326 EGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
GLC R +A LL + K+ I+ + Y LLD
Sbjct: 233 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLD 268
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 129/277 (46%), Gaps = 28/277 (10%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
+ Y ++ + +A+ L EE++ + D I Y+S+I C L R D N
Sbjct: 261 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC----LHDR-IDEAN 315
Query: 159 KM---LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFV 215
+M + S+ C D+ +Y N+L+ F K + L ++M G++ +T
Sbjct: 316 QMFDLMVSKGCLADVVSY----NTLINGFCKAK----RVEDGMKLFREMSQRGLVSNTVT 367
Query: 216 LNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMK 275
N +I+ + + +VD+A F +M +G P+ ++Y+ + GLC+ G + + L +++M+
Sbjct: 368 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 427
Query: 276 EKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRAD 335
++ + TY ++ + + E+A + + PD +TY T++ GLC +
Sbjct: 428 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLH 487
Query: 336 EAFDLLDECKKR------------DISMSEKMYKTLL 360
E L + K+ DI++S ++ K +L
Sbjct: 488 EVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKML 524
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 8/197 (4%)
Query: 167 KPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKC 226
+ DL T+ ++ N C + S+ +M +G PD + ++ + +
Sbjct: 117 RNDLYTFNIVINCF--------CCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRR 168
Query: 227 LEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTY 286
V +A+ + +M G +P+ +Y+ I LC+ RVN F+KE++ K +RP+ TY
Sbjct: 169 NRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTY 228
Query: 287 VIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKK 346
+V L R+ DA +L DM+ +P+ +TY +L+ + + EA +L +E +
Sbjct: 229 TALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
Query: 347 RDISMSEKMYKTLLDDL 363
I Y +L++ L
Sbjct: 289 MSIDPDIVTYSSLINGL 305
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 126/284 (44%), Gaps = 13/284 (4%)
Query: 81 ALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSII 140
A D F+ +++ + Y ++ L R+ A L+ ++I ++ Y++++
Sbjct: 209 AFDFFK-EIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 141 -RFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRS 199
F K L A +++ +M+R PD+ TY+ L N L LH +
Sbjct: 268 DAFVKNGKVL--EAKELFEEMVRMS-IDPDIVTYSSLINGLC-----LHD---RIDEANQ 316
Query: 200 LTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLC 259
+ M + G + D N +I + K V++ +++F EM G N +Y+ + +G
Sbjct: 317 MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF 376
Query: 260 EKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHL 319
+ G V++ F+ +M + P TY I++ L + E A+ + DM D +
Sbjct: 377 QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Query: 320 TYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
TY TV+ G+C+ + +EA+ L + + Y T++ L
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 132/302 (43%), Gaps = 15/302 (4%)
Query: 64 TPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEE 123
T V L D DLAL++ R + + + TII L R + A L E
Sbjct: 225 TYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI-FNTIIDSLCKYRHVEVAVDLFTE 283
Query: 124 VIAGACDGSIPLYNSIIRFCC--GRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLL 181
+ ++ YNS+I C GR +S A + + ML + P++ T+ L ++
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGR---WSDASRLLSNMLEKK-INPNVVTFNALIDAFF 339
Query: 182 RRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGL 241
+ L L ++M + PDT N++I + +DEA ++F M
Sbjct: 340 KEGK--------LVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS 391
Query: 242 YGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFED 301
C PN +Y+ + G C+ RV G+ ++EM ++ L +T TY I+ +
Sbjct: 392 KDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDS 451
Query: 302 AIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
A V M+ N D +TY +L GLC + D A + +K ++ ++ +Y T+++
Sbjct: 452 AQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIE 511
Query: 362 DL 363
+
Sbjct: 512 GM 513
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 104/211 (49%), Gaps = 9/211 (4%)
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPD 212
A D++ M++S +E LL S + + NK + V SL +QM+ +G+ D
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLL--SAVAKMNKFEL-------VISLGEQMQTLGISHD 117
Query: 213 TFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
+ ++ I + + ++ A+ V +M G EP+ + S + G C R++ +
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177
Query: 273 EMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRER 332
+M E +P T T+ ++ L + + +A+ ++ M+ PD +TY TV+ GLC+
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 333 RADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
D A +LL++ + I + ++ T++D L
Sbjct: 238 DIDLALNLLNKMEAARIKANVVIFNTIIDSL 268
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 134/297 (45%), Gaps = 25/297 (8%)
Query: 72 LTSVSDPDLALDIFRWTAQQRSY-NHTDLN-YLTIIKQLNAGRRYQQAETLVEEVIAGAC 129
L+ + D A+D+F + R + + + N L+ + ++N +++ +L E++
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMN---KFELVISLGEQMQTLGI 114
Query: 130 DGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHV 189
+ Y SI C R+ S A V KM++ +PD+ T + L N
Sbjct: 115 SHDLYTY-SIFINCFCRRSQLSLALAVLAKMMKL-GYEPDIVTLSSLLNG---------- 162
Query: 190 CYVYLHAVR-----SLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGC 244
Y H+ R +L QM +G PDTF +I + EA+ + +M GC
Sbjct: 163 ---YCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219
Query: 245 EPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIE 304
+P+ +Y + GLC++G ++ L +M+ ++ + + I+ SL R E A++
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVD 279
Query: 305 VLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
+ +M P+ +TY +++ LC R +A LL ++ I+ + + L+D
Sbjct: 280 LFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALID 336
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 113/245 (46%), Gaps = 13/245 (5%)
Query: 116 QAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTL 175
+AE L EE+I + D YN +I C L A ++ K + S+DC P+++TY
Sbjct: 346 EAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL-DEAKQMF-KFMVSKDCLPNIQTYNT 403
Query: 176 LYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRV 235
L N + C V L ++M G++ +T II+ + + + D A V
Sbjct: 404 LINGFCK-------CKRVEDGVE-LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455
Query: 236 FHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAM 295
F +M + +YS + GLC G+++ L +K +++ + + Y ++ +
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCK 515
Query: 296 DRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKM 355
+ +A ++ + S PD +TY T++ GLC +R EA DL + K+ +
Sbjct: 516 AGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGT 572
Query: 356 YKTLL 360
Y TL+
Sbjct: 573 YNTLI 577
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 117/248 (47%), Gaps = 14/248 (5%)
Query: 103 TIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSII-RFC-CGRKFLFSRAFDVYNKM 160
I+ +L + A+ L E+ ++ YN +I FC GR +S A + M
Sbjct: 15 AIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR---WSDADQLLRHM 71
Query: 161 LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMII 220
+ + PD+ T++ L N+ ++ + + K+M + P T N +I
Sbjct: 72 IEKQ-INPDIVTFSALINAFVKERK--------VSEAEEIYKEMLRWSIFPTTITYNSMI 122
Query: 221 KAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLR 280
+ K VD+A R+ M GC P+ ++S + G C+ RV+ G+ + EM + +
Sbjct: 123 DGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 182
Query: 281 PSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDL 340
+T TY ++ + A ++L +M+ +PD++T+ +L GLC ++ +AF +
Sbjct: 183 ANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 242
Query: 341 LDECKKRD 348
L++ +K +
Sbjct: 243 LEDLQKSE 250
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 90/202 (44%), Gaps = 11/202 (5%)
Query: 167 KPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKC 226
K D+ T + + L + N ++ ++L +M G+ P+ N +I ++
Sbjct: 7 KADVVISTAIVDRLCKDGNHINA--------QNLFTEMHEKGIFPNVLTYNCMIDSFCHS 58
Query: 227 LEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTY 286
+A ++ M P+ ++S + ++ +V++ YKEM + P+T TY
Sbjct: 59 GRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITY 118
Query: 287 VIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKK 346
++ R +DA +L M SPD +T+ T++ G C+ +R D ++ E +
Sbjct: 119 NSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 178
Query: 347 RDISMSEKMYKTLLDDLHYVCR 368
R I + Y TL +H C+
Sbjct: 179 RGIVANTVTYTTL---IHGFCQ 197
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 142/318 (44%), Gaps = 26/318 (8%)
Query: 57 NHLKPGFTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQ 116
N P +P+ V + + S SDP LA +IF + +QQ ++ H+ ++L +I +L GR +
Sbjct: 43 NPKSPIGSPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYF-- 100
Query: 117 AETLVEEVIAGACDGSIPLYNSIIRFCC---GRKFLFSRAFDVYNKMLRSEDCKPDLETY 173
L+++V+A PL I + L + + KML +
Sbjct: 101 --NLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEF--------NF 150
Query: 174 TLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAI 233
T L R + L YL L K + GV+P+T N++++A+ CL D +I
Sbjct: 151 TPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAF--CLNDDLSI 208
Query: 234 --RVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVC 291
++F +M P+ SY + +G C KG+VN + +M K P T + +C
Sbjct: 209 AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD-RTLIGGLC 267
Query: 292 SLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISM 351
M F++ + L +M+ SP +++G C + +EA D+++ K ++
Sbjct: 268 DQGM---FDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETL 324
Query: 352 SEKMYKTLLDDLHYVCRE 369
++ ++ +C E
Sbjct: 325 HSDTWEMVIP---LICNE 339
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 146/331 (44%), Gaps = 27/331 (8%)
Query: 48 LEKQFETWVNHLKPGFTPSDVDRALTSVSDP-------DLALDIFRWTAQQRSYNHTDLN 100
+EK F+ + + GF+P+ V T++ D + A D+F + + +
Sbjct: 179 IEKSFDLLIELTEFGFSPNVV--IYTTLIDGCCKKGEIEKAKDLF-FEMGKLGLVANERT 235
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCC--GRKFLFSRAFDVYN 158
Y +I L +Q + E++ ++ YN ++ C GR AF V++
Sbjct: 236 YTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRT---KDAFQVFD 292
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
+M R ++ TY L L R L+ + QMK+ G+ P+ N
Sbjct: 293 EM-RERGVSCNIVTYNTLIGGLCREMK--------LNEANKVVDQMKSDGINPNLITYNT 343
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
+I + ++ +A+ + ++ G P+ +Y+ + G C KG + KEM+E+
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
++PS TY I++ + A E AI++ M PD TY ++ G C + + +EA
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS 463
Query: 339 DLLDECKKRDISMSEKMYKTLLDDLHYVCRE 369
L +++ +E +Y T++ L Y C+E
Sbjct: 464 RLFKSMVEKNCEPNEVIYNTMI--LGY-CKE 491
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 125/254 (49%), Gaps = 10/254 (3%)
Query: 90 QQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFL 149
++R + + Y T+I L + +A +V+++ + + ++ YN++I CG L
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL 354
Query: 150 FSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGV 209
+A + + L+S P L TY +L + R+ + + K+M+ G+
Sbjct: 355 -GKALSLC-RDLKSRGLSPSLVTYNILVSGFCRKGDT--------SGAAKMVKEMEERGI 404
Query: 210 IPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLG 269
P ++I +++ +++AI++ M G P+ ++YS + G C KG++N+
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASR 464
Query: 270 FYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLC 329
+K M EK P+ Y ++ + A+++L +M +P+ +Y+ ++E LC
Sbjct: 465 LFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLC 524
Query: 330 RERRADEAFDLLDE 343
+ER++ EA L+++
Sbjct: 525 KERKSKEAERLVEK 538
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 3/161 (1%)
Query: 209 VIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGL 268
V+ D + ++IK + E++++ + E+ +G PN Y+ + G C+KG + +
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 269 GFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGL 328
+ EM + L + TY +++ L + + E+ M + P+ TY V+ L
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Query: 329 CRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCRE 369
C++ R +AF + DE ++R +S + Y TL+ L CRE
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL---CRE 316
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 104/223 (46%), Gaps = 10/223 (4%)
Query: 95 NHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAF 154
N + Y T+I + +A +L ++ + S+ YN ++ C RK S A
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFC-RKGDTSGAA 393
Query: 155 DVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTF 214
+ +M KP TYT+L ++ R N + L M+ +G++PD
Sbjct: 394 KMVKEM-EERGIKPSKVTYTILIDTFARSDN--------MEKAIQLRLSMEELGLVPDVH 444
Query: 215 VLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEM 274
+++I + +++EA R+F M CEPN Y+ + G C++G + L KEM
Sbjct: 445 TYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEM 504
Query: 275 KEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPD 317
+EK L P+ ++Y ++ L +R+ ++A ++ M+ + P
Sbjct: 505 EEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 116/271 (42%), Gaps = 15/271 (5%)
Query: 79 DLALDIFRWTAQQRSYNHTDLNYLT--IIKQLNAGRRYQQAETLVEEVIAGACDGSIPLY 136
DLAL F W +Q+ Y N + II L R A + + + Y
Sbjct: 152 DLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSY 211
Query: 137 NSIIRFCC--GRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYL 194
S+I GR + A +V+ KM + CKP L TY N +L F K+ +
Sbjct: 212 TSLISAFANSGR---YREAVNVFKKM-EEDGCKPTLITY----NVILNVFGKMGTPW--- 260
Query: 195 HAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYI 254
+ + SL ++MK+ G+ PD + N +I + EA +VF EM G + +Y+ +
Sbjct: 261 NKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNAL 320
Query: 255 ARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSR 314
+ R + + EM PS TY ++ + A D ++A+E+ M
Sbjct: 321 LDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGT 380
Query: 315 SPDHLTYKTVLEGLCRERRADEAFDLLDECK 345
PD TY T+L G R + + A + +E +
Sbjct: 381 KPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 120/268 (44%), Gaps = 10/268 (3%)
Query: 93 SYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSR 152
+++ + Y ++ R ++A ++ E++ SI YNS+I R +
Sbjct: 309 GFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS-AYARDGMLDE 367
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPD 212
A ++ N+M + KPD+ TYT L + R + + S+ ++M+ G P+
Sbjct: 368 AMELKNQMAE-KGTKPDVFTYTTLLSGFERAGK--------VESAMSIFEEMRNAGCKPN 418
Query: 213 TFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
N IK Y + E +++F E+ + G P+ +++ + + G ++ G +K
Sbjct: 419 ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFK 478
Query: 273 EMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRER 332
EMK P T+ ++ + + FE A+ V ML +PD TY TVL L R
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538
Query: 333 RADEAFDLLDECKKRDISMSEKMYKTLL 360
+++ +L E + +E Y +LL
Sbjct: 539 MWEQSEKVLAEMEDGRCKPNELTYCSLL 566
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 111/252 (44%), Gaps = 10/252 (3%)
Query: 97 TDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDV 156
+L Y +++ G+ +L EEV +G + L +++ C + L A
Sbjct: 558 NELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLV-LVCSKCDLLPEAERA 616
Query: 157 YNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVL 216
+++ L+ PD+ T NS++ + + + + + MK G P
Sbjct: 617 FSE-LKERGFSPDITTL----NSMVSIYGRRQM----VAKANGVLDYMKERGFTPSMATY 667
Query: 217 NMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKE 276
N ++ +S+ + ++ + E+ G +P+ SY+ + C R+ + EM+
Sbjct: 668 NSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRN 727
Query: 277 KCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADE 336
+ P TY + S A D FE+AI V+ M+ + P+ TY ++++G C+ R DE
Sbjct: 728 SGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDE 787
Query: 337 AFDLLDECKKRD 348
A +++ + D
Sbjct: 788 AKLFVEDLRNLD 799
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 102/245 (41%), Gaps = 33/245 (13%)
Query: 144 CGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLR-------------------RF 184
CG F +A VY +ML + PDL TY + +L R +
Sbjct: 502 CGS---FEQAMTVYRRMLDA-GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKP 557
Query: 185 NKLHVCYVYLHA---------VRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRV 235
N+L C + LHA + SL +++ + + P +L ++ SKC + EA R
Sbjct: 558 NELTYCSL-LHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERA 616
Query: 236 FHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAM 295
F E+ G P+ + + + + V + G MKE+ PS +TY ++ +
Sbjct: 617 FSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSR 676
Query: 296 DRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKM 355
F + E+L ++L PD ++Y TV+ CR R +A + E + I
Sbjct: 677 SADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVIT 736
Query: 356 YKTLL 360
Y T +
Sbjct: 737 YNTFI 741
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 18/236 (7%)
Query: 62 GFTPSDVD-RALTSVSDPDLALDIFRWTAQQRSYNHTD---LNYLTIIKQLNAGRRYQQA 117
GF+PS V +L S D LD Q + T Y T++ + + A
Sbjct: 344 GFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESA 403
Query: 118 ETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLY 177
++ EE+ C +I +N+ I+ G + F+ ++++ + PD+ T+
Sbjct: 404 MSIFEEMRNAGCKPNICTFNAFIKMY-GNRGKFTEMMKIFDE-INVCGLSPDIVTW---- 457
Query: 178 NSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFH 237
N+LL F + + V + K+MK G +P+ N +I AYS+C ++A+ V+
Sbjct: 458 NTLLAVFGQNGMD----SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYR 513
Query: 238 EMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSL 293
M G P+ +Y+ + L G Q EM++ +P+ TY CSL
Sbjct: 514 RMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTY----CSL 565
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 115/264 (43%), Gaps = 16/264 (6%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIR-FCCGRK--FLFSRAFDVY 157
Y T++ L G ++Q+E ++ E+ G C + Y S++ + G++ + S A +VY
Sbjct: 527 YNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVY 586
Query: 158 NKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLN 217
+ ++ E +L +L+ +K C + A R+ + ++K G PD LN
Sbjct: 587 SGVI---------EPRAVLLKTLVLVCSK---CDLLPEAERAFS-ELKERGFSPDITTLN 633
Query: 218 MIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEK 277
++ Y + V +A V M G P+ +Y+ + + +E+ K
Sbjct: 634 SMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAK 693
Query: 278 CLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEA 337
++P +Y ++ + + R DA + +M + PD +TY T + + +EA
Sbjct: 694 GIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEA 753
Query: 338 FDLLDECKKRDISMSEKMYKTLLD 361
++ K ++ Y +++D
Sbjct: 754 IGVVRYMIKHGCRPNQNTYNSIVD 777
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 1/151 (0%)
Query: 212 DTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFY 271
D V+ +II K V A +F+ + G + YSY+ + GR + + +
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 272 KEMKEKCLRPSTSTYVIIVCSLA-MDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
K+M+E +P+ TY +I+ M + ++ M + +PD TY T++ R
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKR 291
Query: 331 ERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
EA + +E K S + Y LLD
Sbjct: 292 GSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 119/265 (44%), Gaps = 10/265 (3%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
+ Y T+I+ L R A L ++ ++ YN+++ C A+ + +
Sbjct: 189 VTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRD 248
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
M R + P++ T+T L ++ ++ L + L M + V PD F
Sbjct: 249 MMKRRIE--PNVITFTALIDAFVKVGK--------LMEAKELYNVMIQMSVYPDVFTYGS 298
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
+I +DEA ++F+ M GC PN Y+ + G C+ RV G+ + EM +K
Sbjct: 299 LINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKG 358
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
+ +T TY +++ + R + A EV M PD TY +L+GLC + ++A
Sbjct: 359 VVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKAL 418
Query: 339 DLLDECKKRDISMSEKMYKTLLDDL 363
+ + +KR++ ++ Y ++ +
Sbjct: 419 MIFEYMRKREMDINIVTYTIIIQGM 443
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 130/300 (43%), Gaps = 36/300 (12%)
Query: 81 ALDIFRWTAQQRSY----NHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLY 136
ALD+F R + T L L++I ++N RY +L E++ G PL
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRL--LSVIAKMN---RYDVVISLFEQM---QILGIPPLL 118
Query: 137 NS--IIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYL 194
+ I+ C RA KM++ +PDL T+T L N Y
Sbjct: 119 CTCNIVMHCVCLSSQPCRASCFLGKMMKL-GFEPDLVTFTSLLNG-------------YC 164
Query: 195 HAVR-----SLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAY 249
H R +L Q+ +G P+ +I+ K ++ A+ +F++MG G PN
Sbjct: 165 HWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVV 224
Query: 250 SYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDM 309
+Y+ + GLCE GR ++M ++ + P+ T+ ++ + + +A E+ M
Sbjct: 225 TYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVM 284
Query: 310 LGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCRE 369
+ S PD TY +++ GLC DEA + ++ +E +Y TL +H C+
Sbjct: 285 IQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTL---IHGFCKS 341
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 134/311 (43%), Gaps = 18/311 (5%)
Query: 59 LKPGFTPSDVD-----RALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRR 113
L GF P+ V R L + A+++F S + + Y ++ L R
Sbjct: 180 LGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNV-VTYNALVTGLCEIGR 238
Query: 114 YQQAETLVEEVIAGACDGSIPLYNSII-RFCCGRKFLFSRAFDVYNKMLRSEDCKPDLET 172
+ A L+ +++ + ++ + ++I F K + A ++YN M++ PD+ T
Sbjct: 239 WGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLM--EAKELYNVMIQMS-VYPDVFT 295
Query: 173 YTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEA 232
Y L N L Y L R + M+ G P+ + +I + K V++
Sbjct: 296 YGSLINGLCM--------YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDG 347
Query: 233 IRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCS 292
+++F+EM G N +Y+ + +G C GR + + +M + P TY +++
Sbjct: 348 MKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDG 407
Query: 293 LAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMS 352
L + + E A+ + M + +TY +++G+C+ + ++AFDL + + +
Sbjct: 408 LCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPN 467
Query: 353 EKMYKTLLDDL 363
Y T++
Sbjct: 468 VITYTTMISGF 478
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 76/155 (49%)
Query: 203 QMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKG 262
+M GV+ +T ++I+ Y D A VF++M P+ +Y+ + GLC G
Sbjct: 353 EMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNG 412
Query: 263 RVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYK 322
+V + L ++ M+++ + + TY II+ + + EDA ++ + P+ +TY
Sbjct: 413 KVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYT 472
Query: 323 TVLEGLCRERRADEAFDLLDECKKRDISMSEKMYK 357
T++ G CR EA L + K+ +E +YK
Sbjct: 473 TMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 104/241 (43%), Gaps = 28/241 (11%)
Query: 150 FSRAFDVYNKMLRSEDCKPDLETYTLL---------YNSLLRRFNKLHV---------CY 191
F+ A D++ +M+ S P + +T L Y+ ++ F ++ + C
Sbjct: 64 FNDALDLFTRMVHSRPL-PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 192 VYLHAV---------RSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLY 242
+ +H V +M +G PD ++ Y +++AI +F ++
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 243 GCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDA 302
G +PN +Y+ + R LC+ +N + + +M RP+ TY +V L R+ DA
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 303 IEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDD 362
+L DM+ P+ +T+ +++ + + EA +L + + + Y +L++
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 363 L 363
L
Sbjct: 303 L 303
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 128/270 (47%), Gaps = 10/270 (3%)
Query: 91 QRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLF 150
+R N + + +I + +AE L +E+I + D I Y+S+I C L
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL- 376
Query: 151 SRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVI 210
A ++ M+ S+DC P++ TY N+L++ F K + L ++M G++
Sbjct: 377 DEAKHMFELMI-SKDCFPNVVTY----NTLIKGFCKAK----RVEEGMELFREMSQRGLV 427
Query: 211 PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGF 270
+T N +I+ + + D A ++F +M G P+ +YS + GLC+ G++ + L
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 487
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
++ +++ + P TY I++ + + ED ++ + P+ + Y T++ G CR
Sbjct: 488 FEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547
Query: 331 ERRADEAFDLLDECKKRDISMSEKMYKTLL 360
+ +EA L E K+ + Y TL+
Sbjct: 548 KGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 117/252 (46%), Gaps = 14/252 (5%)
Query: 111 GRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLR--SEDCKP 168
G+R +A LV+++ + +N++I FL ++A + + R + C+P
Sbjct: 163 GKRISEAVALVDQMFVMEYQPNTVTFNTLIHGL----FLHNKASEAVALIDRMVARGCQP 218
Query: 169 DLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLE 228
DL TY + N L +R + + SL K+M+ + D + II A
Sbjct: 219 DLFTYGTVVNGLCKRGD--------IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN 270
Query: 229 VDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVI 288
V++A+ +F EM G PN +Y+ + R LC GR + +M E+ + P+ T+
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 289 IVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRD 348
++ + + + +A ++ +M+ S PD TY +++ G C R DEA + + +D
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 349 ISMSEKMYKTLL 360
+ Y TL+
Sbjct: 391 CFPNVVTYNTLI 402
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 136/303 (44%), Gaps = 15/303 (4%)
Query: 63 FTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVE 122
FT V L D DLAL + + + + + Y TII L + A L
Sbjct: 221 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI-YTTIIDALCNYKNVNDALNLFT 279
Query: 123 EVIAGACDGSIPLYNSIIRFCC--GRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSL 180
E+ ++ YNS+IR C GR +S A + + M+ + P++ T++ L ++
Sbjct: 280 EMDNKGIRPNVVTYNSLIRCLCNYGR---WSDASRLLSDMIERK-INPNVVTFSALIDAF 335
Query: 181 LRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMG 240
++ L L +M + PD F + +I + +DEA +F M
Sbjct: 336 VKEGK--------LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Query: 241 LYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFE 300
C PN +Y+ + +G C+ RV +G+ ++EM ++ L +T TY ++ L +
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 301 DAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
A ++ M+ + PD +TY +L+GLC+ + ++A + + +K + Y ++
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 361 DDL 363
+ +
Sbjct: 508 EGM 510
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 103/211 (48%), Gaps = 9/211 (4%)
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPD 212
A D++ +M++S +E LL S + + NK + V SL ++M+ + + D
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLL--SAIAKMNKFDL-------VISLGERMQNLRISYD 114
Query: 213 TFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
+ N++I + + ++ A+ V +M G EP+ + S + G C R+++ +
Sbjct: 115 LYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVD 174
Query: 273 EMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRER 332
+M +P+T T+ ++ L + + +A+ ++ M+ PD TY TV+ GLC+
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 234
Query: 333 RADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
D A LL + +K I +Y T++D L
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDAL 265
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 106/266 (39%), Gaps = 55/266 (20%)
Query: 136 YNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLH 195
YN +I C R+ A V KM++ +PD+ T + L N Y H
Sbjct: 118 YNILINCFC-RRSQLPLALAVLGKMMKL-GYEPDIVTLSSLLNG-------------YCH 162
Query: 196 AVR-----SLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYS 250
R +L QM + P+T N +I + EA+ + M GC+P+ ++
Sbjct: 163 GKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFT 222
Query: 251 YSYIARGLCEKG-----------------------------------RVNQGLGFYKEMK 275
Y + GLC++G VN L + EM
Sbjct: 223 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMD 282
Query: 276 EKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRAD 335
K +RP+ TY ++ L R+ DA +L DM+ +P+ +T+ +++ +E +
Sbjct: 283 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 342
Query: 336 EAFDLLDECKKRDISMSEKMYKTLLD 361
EA L DE KR I Y +L++
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLIN 368
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 118/255 (46%), Gaps = 10/255 (3%)
Query: 91 QRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLF 150
+RS + Y ++I R +A+ + E +I+ C ++ YN++I+ C K +
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV- 411
Query: 151 SRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVI 210
+++ +M + L T+ YN+L++ + C + + K+M + GV
Sbjct: 412 EEGMELFREM-----SQRGLVGNTVTYNTLIQGLFQAGDC----DMAQKIFKKMVSDGVP 462
Query: 211 PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGF 270
PD ++++ K ++++A+ VF + EP+ Y+Y+ + G+C+ G+V G
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
+ + K ++P+ Y ++ E+A + +M + P+ TY T++ R
Sbjct: 523 FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLR 582
Query: 331 ERRADEAFDLLDECK 345
+ + +L+ E +
Sbjct: 583 DGDKAASAELIKEMR 597
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 8/192 (4%)
Query: 169 DLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLE 228
DL +Y +L N RR ++L + A+ L K MK +G PD L+ ++ Y
Sbjct: 114 DLYSYNILINCFCRR-SQLPL------ALAVLGKMMK-LGYEPDIVTLSSLLNGYCHGKR 165
Query: 229 VDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVI 288
+ EA+ + +M + +PN +++ + GL + ++ + M + +P TY
Sbjct: 166 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 225
Query: 289 IVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRD 348
+V L + A+ +L M D + Y T+++ LC + ++A +L E +
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 349 ISMSEKMYKTLL 360
I + Y +L+
Sbjct: 286 IRPNVVTYNSLI 297
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 128/297 (43%), Gaps = 26/297 (8%)
Query: 66 SDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVI 125
D R L + + +A DIF YN ++I L+ +R +A + + E++
Sbjct: 469 GDAMRVLKEMKEQGIAPDIF-------CYN-------SLIIGLSKAKRMDEARSFLVEMV 514
Query: 126 AGACDGSIPLYNSIIR-FCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRF 184
+ Y + I + +F + D Y K +R P+ T L N ++
Sbjct: 515 ENGLKPNAFTYGAFISGYIEASEF---ASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571
Query: 185 NKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGC 244
+ C Y RS+ Q G++ D +++ K +VD+A +F EM G
Sbjct: 572 KVIEACSAY----RSMVDQ----GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Query: 245 EPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIE 304
P+ +SY + G + G + + + EM E+ L P+ Y +++ E A E
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 305 VLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
+L +M P+ +TY T+++G C+ EAF L DE K + + +Y TL+D
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 75/178 (42%), Gaps = 8/178 (4%)
Query: 169 DLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLE 228
D +TYT+L N L + + + ++M+ G+ PD F ++I +SK
Sbjct: 591 DAKTYTVLMNGLFKNDK--------VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 229 VDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVI 288
+ +A +F EM G PN Y+ + G C G + + EM K L P+ TY
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 289 IVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKK 346
I+ +A + +M PD Y T+++G CR + A + KK
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK 760
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 124/312 (39%), Gaps = 49/312 (15%)
Query: 79 DLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETL--VEEVIAGA---CDGSI 133
DL D+++ ++ ++ II AG + L E+ A DG++
Sbjct: 203 DLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGAL 262
Query: 134 PLYNSIIRFCCGR---KFLFSRAFDVYNKMLRSEDCKP------------DLETYTLLYN 178
L S+I C G K+ + D K+ R ED K D TY+LL +
Sbjct: 263 KLKESMI--CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320
Query: 179 SLLRRFNK------LH-----------------VCYVYLHAV----RSLTKQMKAVGVIP 211
LL+ N +H +C + V ++L M A G+IP
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380
Query: 212 DTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFY 271
+I+ Y + V + + EM + Y+Y + +G+C G ++
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440
Query: 272 KEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRE 331
KEM RP+ Y ++ + + RF DA+ VL +M +PD Y +++ GL +
Sbjct: 441 KEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKA 500
Query: 332 RRADEAFDLLDE 343
+R DEA L E
Sbjct: 501 KRMDEARSFLVE 512
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 98/237 (41%), Gaps = 21/237 (8%)
Query: 95 NHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCC----GRKFLF 150
NHT Y +I L GR A+ LV E+++ + +Y+ CC ++ +
Sbjct: 312 NHT---YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYD-----CCICVMSKEGVM 363
Query: 151 SRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVI 210
+A +++ M+ S P + Y L R N + L +MK ++
Sbjct: 364 EKAKALFDGMIAS-GLIPQAQAYASLIEGYCREKN--------VRQGYELLVEMKKRNIV 414
Query: 211 PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGF 270
+ ++K ++D A + EM GC PN Y+ + + + R +
Sbjct: 415 ISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRV 474
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEG 327
KEMKE+ + P Y ++ L+ +R ++A L +M+ N P+ TY + G
Sbjct: 475 LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 99/224 (44%), Gaps = 16/224 (7%)
Query: 154 FDVYNKMLRSEDCKPDLETYTLLY-------------NSLLRRFNKLHVCYVYLHAVRSL 200
+DVY M+ + D++TY +L + L + + + + L
Sbjct: 206 WDVYKGMVE-RNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKL 264
Query: 201 TKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCE 260
+ M G++P + +++I K +++A + EM G + ++YS + GL +
Sbjct: 265 KESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK 324
Query: 261 KGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFD-MLGNSRSPDHL 319
+ G EM + Y +C ++ + E A + LFD M+ + P
Sbjct: 325 GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKA-KALFDGMIASGLIPQAQ 383
Query: 320 TYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
Y +++EG CRE+ + ++LL E KKR+I +S Y T++ +
Sbjct: 384 AYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGM 427
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 97/217 (44%), Gaps = 20/217 (9%)
Query: 152 RAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIP 211
+A ++++M+ E P++ Y +L R + + L +M G+ P
Sbjct: 645 KASSIFDEMVE-EGLTPNVIIYNMLLGGFCRSGE--------IEKAKELLDEMSVKGLHP 695
Query: 212 DTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFY 271
+ II Y K ++ EA R+F EM L G P+++ Y+ + G C V + + +
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Query: 272 KEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVL-------FDMLGNSRSPDHLTYKTV 324
K+ C ST+ + ++ + + E EVL FD G P+ +TY +
Sbjct: 756 GTNKKGC-ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGK---PNDVTYNIM 811
Query: 325 LEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
++ LC+E + A +L + + ++ + Y +LL+
Sbjct: 812 IDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 131/289 (45%), Gaps = 22/289 (7%)
Query: 80 LALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSI 139
L F+W+ +QR Y H+ Y +I+ R+Y+ L+ ++I + ++
Sbjct: 116 LTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYK----LMWDLINAMRKKKML---NV 168
Query: 140 IRFC-CGRKFLFSRAFD----VYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYL 194
FC RK+ ++ D +N M + D P+L + L ++L + N V+
Sbjct: 169 ETFCIVMRKYARAQKVDEAIYAFNVMEKY-DLPPNLVAFNGLLSALCKSKNVRKAQEVFE 227
Query: 195 HAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYI 254
+ T PD+ +++++ + K + +A VF EM GC P+ +YS +
Sbjct: 228 NMRDRFT---------PDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIM 278
Query: 255 ARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSR 314
LC+ GRV++ LG + M +P+T Y ++V + + R E+A++ +M +
Sbjct: 279 VDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGM 338
Query: 315 SPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
D + +++ C+ R + +L E K + ++ + K +L L
Sbjct: 339 KADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHL 387
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 117/241 (48%), Gaps = 12/241 (4%)
Query: 96 HTDL-NYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAF 154
H D+ Y ++ L R +A +V + C + +Y S++ G + A
Sbjct: 269 HPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIY-SVLVHTYGTENRLEEAV 327
Query: 155 DVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTF 214
D + +M RS ++ ++NSL+ F K + + V + K+MK+ GV P++
Sbjct: 328 DTFLEMERS-----GMKADVAVFNSLIGAFCKAN----RMKNVYRVLKEMKSKGVTPNSK 378
Query: 215 VLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEM 274
N+I++ + E DEA VF +M + CEP+A +Y+ + + CEK + +K M
Sbjct: 379 SCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYM 437
Query: 275 KEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRA 334
++K + PS T+ +++ L +R + A +L +M+ P +T+ + + L +E R
Sbjct: 438 RKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEERE 497
Query: 335 D 335
D
Sbjct: 498 D 498
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 21/233 (9%)
Query: 116 QAETLVEEVIAGACDGSIPLYNSIIRFCC--GRKFLFSRAFDVYNKMLRSED---CKPDL 170
+A + E+I C I Y+ ++ C GR D ++RS D CKP
Sbjct: 255 KAREVFREMIDAGCHPDIVTYSIMVDILCKAGR-------VDEALGIVRSMDPSICKPTT 307
Query: 171 ETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVD 230
Y++L ++ N+L AV + +M+ G+ D V N +I A+ K +
Sbjct: 308 FIYSVLVHTYGTE-NRLE------EAVDTFL-EMERSGMKADVAVFNSLIGAFCKANRMK 359
Query: 231 EAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIV 290
RV EM G PN+ S + I R L E+G ++ +++M + C P TY +++
Sbjct: 360 NVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVC-EPDADTYTMVI 418
Query: 291 CSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDE 343
+ E A +V M P T+ ++ GLC ER +A LL+E
Sbjct: 419 KMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEE 471
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 107/228 (46%), Gaps = 14/228 (6%)
Query: 138 SIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLR--RFNKLHVCYVYLH 195
SI+ G++ +A +V+ +M+ + C PD+ TY+++ + L + R ++ L
Sbjct: 241 SILLEGWGKEPNLPKAREVFREMIDA-GCHPDIVTYSIMVDILCKAGRVDEA------LG 293
Query: 196 AVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIA 255
VRS+ + P TF+ ++++ Y ++EA+ F EM G + + ++ +
Sbjct: 294 IVRSMDPSI----CKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLI 349
Query: 256 RGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRS 315
C+ R+ KEMK K + P++ + II+ L ++A +V M+
Sbjct: 350 GAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVC-E 408
Query: 316 PDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
PD TY V++ C ++ + A + +K+ + S + L++ L
Sbjct: 409 PDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGL 456
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 122/248 (49%), Gaps = 10/248 (4%)
Query: 117 AETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLL 176
AE L+ E+ + + + ++N++I C RK + A +Y+ M + + D+ T
Sbjct: 383 AEILMNEMQSKGVNITQVVFNTLIDGYC-RKGMVDEASMIYDVM-EQKGFQADVFTC--- 437
Query: 177 YNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVF 236
N++ FN+L Y A + L + M+ GV T +I Y K V+EA R+F
Sbjct: 438 -NTIASCFNRLKR---YDEAKQWLFRMMEG-GVKLSTVSYTNLIDVYCKEGNVEEAKRLF 492
Query: 237 HEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMD 296
EM G +PNA +Y+ + C++G++ + M+ + P + TY ++ +
Sbjct: 493 VEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIA 552
Query: 297 RRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMY 356
++A+ + +M + +TY ++ GL + ++DEAF L DE K++ ++ K+Y
Sbjct: 553 DNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVY 612
Query: 357 KTLLDDLH 364
L+ +H
Sbjct: 613 TALIGSMH 620
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 94/213 (44%), Gaps = 19/213 (8%)
Query: 154 FDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDT 213
+++ +M+ S K + + T++ L RR + + L K+ G+ P+
Sbjct: 209 LEIFRRMVDS-GVKITVYSLTIVVEGLCRRGE--------VEKSKKLIKEFSVKGIKPEA 259
Query: 214 FVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKE 273
+ N II AY K + V M G N +Y+ + + G+++ + E
Sbjct: 260 YTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDE 319
Query: 274 MKEKCLRPSTSTYVIIV---CSLA-MDRRFEDAIEVLFDMLG-NSRSPDHLTYKTVLEGL 328
M+E+ + Y ++ C M R F +LFD L SP TY +++G+
Sbjct: 320 MRERGIESDVHVYTSLISWNCRKGNMKRAF-----LLFDELTEKGLSPSSYTYGALIDGV 374
Query: 329 CRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
C+ A L++E + + +++++ ++ TL+D
Sbjct: 375 CKVGEMGAAEILMNEMQSKGVNITQVVFNTLID 407
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 3/148 (2%)
Query: 222 AYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRP 281
A K +D + +F M G + YS + + GLC +G V + KE K ++P
Sbjct: 198 AAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKP 257
Query: 282 STSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLL 341
TY I+ + R F VL M + + +TY ++E + + +A L
Sbjct: 258 EAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLF 317
Query: 342 DECKKRDISMSEKMYKTLLDDLHYVCRE 369
DE ++R I +Y +L + + CR+
Sbjct: 318 DEMRERGIESDVHVYTSL---ISWNCRK 342
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 85/188 (45%), Gaps = 12/188 (6%)
Query: 190 CYVYLHAVR---------SLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMG 240
C V+L A + + ++M GV + L ++++ + EV+++ ++ E
Sbjct: 192 CIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFS 251
Query: 241 LYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFE 300
+ G +P AY+Y+ I ++ + G K MK+ + + TY +++ + +
Sbjct: 252 VKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMS 311
Query: 301 DAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
DA ++ +M D Y +++ CR+ AF L DE ++ +S S Y L+
Sbjct: 312 DAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALI 371
Query: 361 DDLHYVCR 368
D VC+
Sbjct: 372 DG---VCK 376
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 81/200 (40%), Gaps = 8/200 (4%)
Query: 161 LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMII 220
+R + D+ YT L + R+ N ++ ++ G+ P ++ +I
Sbjct: 320 MRERGIESDVHVYTSLISWNCRKGNMKRAFLLF--------DELTEKGLSPSSYTYGALI 371
Query: 221 KAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLR 280
K E+ A + +EM G ++ + G C KG V++ Y M++K +
Sbjct: 372 DGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQ 431
Query: 281 PSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDL 340
T I +R+++A + LF M+ ++Y +++ C+E +EA L
Sbjct: 432 ADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRL 491
Query: 341 LDECKKRDISMSEKMYKTLL 360
E + + + Y ++
Sbjct: 492 FVEMSSKGVQPNAITYNVMI 511
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 112/242 (46%), Gaps = 10/242 (4%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
+ Y ++I L + R+ A +V + + +N++I C ++ S A + Y
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACV-KEGRVSEAEEFYE 280
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
+M+R PD+ TY+LL L Y L + M + G PD ++
Sbjct: 281 EMIR-RSLDPDIVTYSLLIYGLCM--------YSRLDEAEEMFGFMVSKGCFPDVVTYSI 331
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
+I Y K +V+ +++F EM G N +Y+ + +G C G++N ++ M
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG 391
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
+ P+ TY +++ L + + E A+ +L DM N D +TY ++ G+C+ +A+
Sbjct: 392 VHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAW 451
Query: 339 DL 340
D+
Sbjct: 452 DI 453
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 130/284 (45%), Gaps = 33/284 (11%)
Query: 66 SDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVI 125
SD R ++ ++ ++ D+F + A +I R +AE EE+I
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNA--------------LIDACVKEGRVSEAEEFYEEMI 283
Query: 126 AGACDGSIPLYNSIIRFCCGRKFLFSR---AFDVYNKMLRSEDCKPDLETYTLLYNSLLR 182
+ D I Y+ +I C ++SR A +++ M+ S+ C PD+ TY++L N +
Sbjct: 284 RRSLDPDIVTYSLLIYGLC----MYSRLDEAEEMFGFMV-SKGCFPDVVTYSILINGYCK 338
Query: 183 RFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLY 242
K+ H ++ L +M GV+ +T ++I+ Y + +++ A +F M
Sbjct: 339 S-KKVE------HGMK-LFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFC 390
Query: 243 GCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDA 302
G PN +Y+ + GLC+ G++ + L +M++ + TY II+ + DA
Sbjct: 391 GVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADA 450
Query: 303 IEVLFDMLGNSRSPDHLTYKTVLEGLCRE---RRADEAFDLLDE 343
++ + PD TY T++ GL ++ R AD F + E
Sbjct: 451 WDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKE 494
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 103/258 (39%), Gaps = 44/258 (17%)
Query: 138 SIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAV 197
+I+ C R S A KM++ +P + T+ L N R Y++
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGH-EPSIVTFGSLLNGFCRGDRVYDALYMF---- 174
Query: 198 RSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARG 257
QM +G P+ + N II K +VD A+ + + M G P+ +Y+ + G
Sbjct: 175 ----DQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG 230
Query: 258 LC-----------------------------------EKGRVNQGLGFYKEMKEKCLRPS 282
LC ++GRV++ FY+EM + L P
Sbjct: 231 LCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPD 290
Query: 283 TSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLD 342
TY +++ L M R ++A E+ M+ PD +TY ++ G C+ ++ + L
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350
Query: 343 ECKKRDISMSEKMYKTLL 360
E +R + + Y L+
Sbjct: 351 EMSQRGVVRNTVTYTILI 368
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 114/285 (40%), Gaps = 45/285 (15%)
Query: 111 GRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDL 170
G R A + ++++ ++ +YN+II C K + A D+ N+M + PD+
Sbjct: 164 GDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQV-DNALDLLNRM-EKDGIGPDV 221
Query: 171 ETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKA-------- 222
TY L + L + A R + M + PD F N +I A
Sbjct: 222 VTYNSLISGLCSSGR-------WSDATR-MVSCMTKREIYPDVFTFNALIDACVKEGRVS 273
Query: 223 -------------------------YSKCL--EVDEAIRVFHEMGLYGCEPNAYSYSYIA 255
Y C+ +DEA +F M GC P+ +YS +
Sbjct: 274 EAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILI 333
Query: 256 RGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRS 315
G C+ +V G+ + EM ++ + +T TY I++ + A E+ M+
Sbjct: 334 NGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVH 393
Query: 316 PDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
P+ +TY +L GLC + ++A +L + +K + Y ++
Sbjct: 394 PNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 79/162 (48%)
Query: 200 LTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLC 259
L +QM+ +G+ + N+++ + +C ++ A+ +M G EP+ ++ + G C
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC 162
Query: 260 EKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHL 319
RV L + +M +P+ Y I+ L ++ ++A+++L M + PD +
Sbjct: 163 RGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVV 222
Query: 320 TYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
TY +++ GLC R +A ++ KR+I + L+D
Sbjct: 223 TYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALID 264
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 72/154 (46%)
Query: 210 IPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLG 269
+P + ++ A SK + D I ++ +M + G N + + + C +++ L
Sbjct: 78 LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137
Query: 270 FYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLC 329
F +M + PS T+ ++ R DA+ + M+G P+ + Y T+++GLC
Sbjct: 138 FLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
Query: 330 RERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+ ++ D A DLL+ +K I Y +L+ L
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGL 231
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 142/334 (42%), Gaps = 18/334 (5%)
Query: 49 EKQFETWVNHLKPGFTP-----SDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDL-NYL 102
EK F + GF P S V L + S +LA +F +R D+ Y
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFE--EMKRGGLVADVYTYT 522
Query: 103 TIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLR 162
++ +QA E+ C ++ Y ++I K + S A +++ ML
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKV-SYANELFETML- 580
Query: 163 SEDCKPDLETYTLLYNSLLRRFNKLHVCYVY--------LHAVRSLTKQMKAVGVIPDTF 214
SE C P++ TY+ L + + C ++ + V KQ P+
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 640
Query: 215 VLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEM 274
++ + K V+EA ++ M + GCEPN Y + GLC+ G++++ EM
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700
Query: 275 KEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRA 334
E + TY ++ +R + A +VL ML NS +P+ + Y +++GLC+ +
Sbjct: 701 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 760
Query: 335 DEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCR 368
DEA+ L+ +++ + Y ++D + +
Sbjct: 761 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 133/328 (40%), Gaps = 55/328 (16%)
Query: 86 RWTAQQRSYNHTD--LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFC 143
+W + R T + Y +I ++ A L E +++ C +I Y+++I
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Query: 144 CGRKFLFSRAFDVYNKMLRSEDCKPDLETY------------TLLYNSLLRRFNKLHVCY 191
C + +A ++ +M S+D PD++ Y + Y +LL F K H
Sbjct: 599 C-KAGQVEKACQIFERMCGSKDV-PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH--- 653
Query: 192 VYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYG-------- 243
+ R L M G P+ V + +I K ++DEA V EM +G
Sbjct: 654 -RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTY 712
Query: 244 ---------------------------CEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKE 276
C PN Y+ + GLC+ G+ ++ + M+E
Sbjct: 713 SSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE 772
Query: 277 KCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADE 336
K +P+ TY ++ M + E +E+L M +P+++TY+ +++ C+ D
Sbjct: 773 KGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDV 832
Query: 337 AFDLLDECKKRDISMSEKMYKTLLDDLH 364
A +LL+E K+ Y+ +++ +
Sbjct: 833 AHNLLEEMKQTHWPTHTAGYRKVIEGFN 860
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 124/287 (43%), Gaps = 26/287 (9%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
+N + + L + +Y++A +++ E+I Y+ ++ + C + AF ++
Sbjct: 449 INVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKM-ELAFLLFE 507
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
+M R D+ TYT++ +S + + R +M+ VG P+
Sbjct: 508 EMKRG-GLVADVYTYTIMVDSFCKAG--------LIEQARKWFNEMREVGCTPNVVTYTA 558
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLG--------- 269
+I AY K +V A +F M GC PN +YS + G C+ G+V +
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618
Query: 270 -------FYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYK 322
++K+ + RP+ TY ++ R E+A ++L M P+ + Y
Sbjct: 619 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678
Query: 323 TVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCRE 369
+++GLC+ + DEA ++ E + + Y +L+D V R+
Sbjct: 679 ALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQ 725
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 118/278 (42%), Gaps = 18/278 (6%)
Query: 90 QQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFL 149
+ + T Y ++I + +R A ++ +++ +C ++ +Y +I C
Sbjct: 701 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK---- 756
Query: 150 FSRAFDVYN--KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAV 207
+ + Y +M+ + C+P++ TYT + + K+ C L ++M +
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF-GMIGKIETCL-------ELLERMGSK 808
Query: 208 GVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQG 267
GV P+ ++I K +D A + EM + Y + G +
Sbjct: 809 GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIES 866
Query: 268 LGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRS-PDHL-TYKTVL 325
LG E+ + P S Y +++ +L +R E A+ +L ++ S + D+ TY +++
Sbjct: 867 LGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLI 926
Query: 326 EGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
E LC + + AF L E K+ + + + +L+ L
Sbjct: 927 ESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGL 964
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 117/267 (43%), Gaps = 18/267 (6%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIR--FCCGRKFLFSRAFDVYN 158
Y +I L + +A+ + E+ ++ Y+S+I F R+ L S+ V +
Sbjct: 677 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK---VLS 733
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
KML + C P++ YT + + L + K Y L + M+ G P+
Sbjct: 734 KMLENS-CAPNVVIYTEMIDGLCK-VGKTDEAY-------KLMQMMEEKGCQPNVVTYTA 784
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
+I + +++ + + MG G PN +Y + C+ G ++ +EMK+
Sbjct: 785 MIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH 844
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
T+ Y ++ ++ F +++ +L ++ + +P Y+ +++ L + +R + A
Sbjct: 845 WPTHTAGYRKVI--EGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMAL 902
Query: 339 DLLDECKKRDISMSE--KMYKTLLDDL 363
LL+E ++ + Y +L++ L
Sbjct: 903 RLLEEVATFSATLVDYSSTYNSLIESL 929
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 98/220 (44%), Gaps = 14/220 (6%)
Query: 128 ACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKL 187
C S ++NS++ C S A+ + KM++ P Y +L S+ + L
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGD-HSYAYKLLKKMVKCGH-MPGYVVYNILIGSICGDKDSL 424
Query: 188 HVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMI-IKAYSKCL----EVDEAIRVFHEMGLY 242
+ C + A ++ + +M A GV VLN I + ++++CL + ++A V EM
Sbjct: 425 N-CDLLDLAEKAYS-EMLAAGV-----VLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 477
Query: 243 GCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDA 302
G P+ +YS + LC ++ ++EMK L TY I+V S E A
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 303 IEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLD 342
+ +M +P+ +TY ++ + ++ A +L +
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 138/317 (43%), Gaps = 25/317 (7%)
Query: 59 LKPGFTPSDVD-----RALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRR 113
++ GF P++V + + LA+++ R ++R + Y II L
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLR-KMEERKIKLDAVKYSIIIDGLCKDGS 262
Query: 114 YQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLR---SEDCKPDL 170
A L E+ I +Y ++IR F ++ +D K+LR PD+
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIR-----GFCYAGRWDDGAKLLRDMIKRKITPDV 317
Query: 171 ETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVD 230
++ L + ++ L L K+M G+ PDT +I + K ++D
Sbjct: 318 VAFSALIDCFVKEGK--------LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 231 EAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIV 290
+A + M GC PN +++ + G C+ ++ GL +++M + + T TY ++
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 291 CSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDIS 350
+ E A E+ +M+ PD ++YK +L+GLC ++A ++ ++ +K +
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Query: 351 MSEKMYKTLLDDLHYVC 367
+ +Y + +H +C
Sbjct: 490 LDIGIYNII---IHGMC 503
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 107/211 (50%), Gaps = 9/211 (4%)
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPD 212
A D++ +M RS +P L ++ L+ S++ R + + V L KQM+ G+ +
Sbjct: 56 AVDLFQEMTRSRP-RPRLIDFSRLF-SVVARTKQYDL-------VLDLCKQMELKGIAHN 106
Query: 213 TFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
+ L+++I +C ++ A ++ G EP+ ++S + GLC +GRV++ L
Sbjct: 107 LYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVD 166
Query: 273 EMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRER 332
M E +P+ T +V L ++ + DA+ ++ M+ P+ +TY VL+ +C+
Sbjct: 167 RMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSG 226
Query: 333 RADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+ A +LL + ++R I + Y ++D L
Sbjct: 227 QTALAMELLRKMEERKIKLDAVKYSIIIDGL 257
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 106/232 (45%), Gaps = 17/232 (7%)
Query: 113 RYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLR---SEDCKPD 169
+ ++AE L +E+I Y S+I C L D N ML S+ C P+
Sbjct: 332 KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL-----DKANHMLDLMVSKGCGPN 386
Query: 170 LETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEV 229
+ T+ +L N + K ++ L L ++M GV+ DT N +I+ + + ++
Sbjct: 387 IRTFNILING----YCKANLIDDGLE----LFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 230 DEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVII 289
+ A +F EM P+ SY + GLC+ G + L ++++++ + Y II
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 290 VCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLL 341
+ + + +DA ++ + PD TY ++ GLC++ EA DLL
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA-DLL 549
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 96/224 (42%), Gaps = 9/224 (4%)
Query: 138 SIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAV 197
SI+ CC R S AF K+++ +PD T++ L N L +
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKL-GYEPDTVTFSTLINGLCLEGR--------VSEA 161
Query: 198 RSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARG 257
L +M +G P LN ++ +V +A+ + M G +PN +Y + +
Sbjct: 162 LELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKV 221
Query: 258 LCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPD 317
+C+ G+ + ++M+E+ ++ Y II+ L D ++A + +M D
Sbjct: 222 MCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 281
Query: 318 HLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
+ Y T++ G C R D+ LL + KR I+ + L+D
Sbjct: 282 IIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID 325
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 120/274 (43%), Gaps = 12/274 (4%)
Query: 91 QRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLF 150
QR + + Y ++I + +A +++ +++ C +I +N +I C + L
Sbjct: 345 QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYC-KANLI 403
Query: 151 SRAFDVYNKM-LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGV 209
+++ KM LR + T+ YN+L++ F +L L + L ++M + V
Sbjct: 404 DDGLELFRKMSLRG------VVADTVTYNTLIQGFCELG----KLEVAKELFQEMVSRRV 453
Query: 210 IPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLG 269
PD +++ E ++A+ +F ++ E + Y+ I G+C +V+
Sbjct: 454 RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 513
Query: 270 FYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLC 329
+ + K ++P TY I++ L +A + M + SP+ TY ++
Sbjct: 514 LFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHL 573
Query: 330 RERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
E A ++ L++E K+ S+ K ++D L
Sbjct: 574 GEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 117/264 (44%), Gaps = 10/264 (3%)
Query: 97 TDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDV 156
T Y T+IK + AE L++E+++ + + + S+I C +F A
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH-LMFDSALRF 457
Query: 157 YNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVL 216
+ML + P T L + L + ++ Q G + DT
Sbjct: 458 VGEMLL-RNMSPGGGLLTTLISGLCKHGKHSKALELWF--------QFLNKGFVVDTRTS 508
Query: 217 NMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKE 276
N ++ + ++DEA R+ E+ GC + SY+ + G C K ++++ F EM +
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 277 KCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADE 336
+ L+P TY I++C L + E+AI+ D N PD TY +++G C+ R +E
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 337 AFDLLDECKKRDISMSEKMYKTLL 360
+ DE +++ + +Y L+
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLI 652
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 140/322 (43%), Gaps = 26/322 (8%)
Query: 63 FTPSDVDRALT---SVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAET 119
+P + DR S +P ALD FR + S++ + +Y +I L A
Sbjct: 88 LSPLEFDRLFPEFRSKVNPKTALDFFRLASDSFSFSFSLRSYCLLIGLLLDANLLSAARV 147
Query: 120 LVEEVIAGAC--------DGSIPLYNSI--IRFCCG---RKFLFSRAFDVYNKMLRSEDC 166
++ +I G D + + +++ + C R+ + +VY + + C
Sbjct: 148 VLIRLINGNVPVLPCGLRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGC 207
Query: 167 KPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAV--------GVIPDTFVLNM 218
L+ + +L N + F C + L ++ + K GV PD ++
Sbjct: 208 YLALDVFPVLANKGM--FPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTT 265
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
I A+ K +V+EA+++F +M G PN +++ + GL GR ++ F ++M E+
Sbjct: 266 AINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERG 325
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
+ P+ TY I+V L +R DA VL +M P+ + Y +++ ++A
Sbjct: 326 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI 385
Query: 339 DLLDECKKRDISMSEKMYKTLL 360
++ D + +S++ Y TL+
Sbjct: 386 EIKDLMVSKGLSLTSSTYNTLI 407
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 123/283 (43%), Gaps = 45/283 (15%)
Query: 113 RYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLET 172
+ +A + +E++ C YN++I CCG+K L AF ++M++ KPD T
Sbjct: 520 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL-DEAFMFLDEMVK-RGLKPDNYT 577
Query: 173 YTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEA 232
Y++L L NK+ A++ K G++PD + +++I K +E
Sbjct: 578 YSILICGLFN-MNKVE------EAIQ-FWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 233 IRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCS 292
F EM +PN Y+++ R C GR++ L ++MK K + P+++TY ++
Sbjct: 630 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Query: 293 LAMDRRFEDA----------------------------------IEVLF-DMLGNSRSPD 317
+++ R E+A +E L +M + P+
Sbjct: 690 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 749
Query: 318 HLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
+TY ++ G R+ EA LL+E +++ I YK +
Sbjct: 750 KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 792
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 13/217 (5%)
Query: 130 DGSIP---LYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNK 186
+G +P Y+ +I CC + + +++M+ S++ +P+ T++YN L+R + +
Sbjct: 604 NGMLPDVYTYSVMIDGCC-KAERTEEGQEFFDEMM-SKNVQPN----TVVYNHLIRAYCR 657
Query: 187 LHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEP 246
L L + MK G+ P++ +IK S V+EA +F EM + G EP
Sbjct: 658 SG----RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 713
Query: 247 NAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVL 306
N + Y+ + G + G++ + +EM K + P+ TY +++ A D +A +L
Sbjct: 714 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 773
Query: 307 FDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDE 343
+M PD +TYK + G ++ EAF DE
Sbjct: 774 NEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 80/159 (50%)
Query: 203 QMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKG 262
+M G+ PD + +++I +V+EAI+ + + G P+ Y+YS + G C+
Sbjct: 565 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 624
Query: 263 RVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYK 322
R +G F+ EM K ++P+T Y ++ + R A+E+ DM SP+ TY
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 684
Query: 323 TVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
++++G+ R +EA L +E + + + Y L+D
Sbjct: 685 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 723
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 77/169 (45%)
Query: 200 LTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLC 259
+ K++ G + D N +I ++DEA EM G +P+ Y+YS + GL
Sbjct: 527 IQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF 586
Query: 260 EKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHL 319
+V + + F+ + K + P TY +++ R E+ E +M+ + P+ +
Sbjct: 587 NMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTV 646
Query: 320 TYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCR 368
Y ++ CR R A +L ++ K + IS + Y +L+ + + R
Sbjct: 647 VYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 107/242 (44%), Gaps = 14/242 (5%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFC--CGRKFLFSRAFDVYN 158
+ T I G + ++A L ++ ++ +N++I CGR + AF
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR---YDEAFMFKE 319
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
KM+ +P L TY++L L R ++ Y L K+M G P+ V N
Sbjct: 320 KMVE-RGMEPTLITYSILVKGLTRA-KRIGDAYFVL-------KEMTKKGFPPNVIVYNN 370
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
+I ++ + +++AI + M G + +Y+ + +G C+ G+ + KEM
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 430
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
+ ++ ++C L F+ A+ + +ML + SP T++ GLC+ + +A
Sbjct: 431 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 490
Query: 339 DL 340
+L
Sbjct: 491 EL 492
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 105/262 (40%), Gaps = 10/262 (3%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
+ + T+I L RY +A E+++ + ++ Y+ +++ K R D Y
Sbjct: 296 VTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAK----RIGDAY- 350
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
+ E K ++YN+L+ F + L+ + M + G+ + N
Sbjct: 351 -FVLKEMTKKGFPPNVIVYNNLIDSFIEAG----SLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
+IK Y K + D A R+ EM G N S++ + LC + L F EM +
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
+ P ++ L + A+E+ F L D T +L GLC + DEAF
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 339 DLLDECKKRDISMSEKMYKTLL 360
+ E R M Y TL+
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLI 547
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 117/264 (44%), Gaps = 10/264 (3%)
Query: 97 TDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDV 156
T Y T+IK + AE L++E+++ + + + S+I C +F A
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH-LMFDSALRF 457
Query: 157 YNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVL 216
+ML + P T L + L + ++ Q G + DT
Sbjct: 458 VGEMLL-RNMSPGGGLLTTLISGLCKHGKHSKALELWF--------QFLNKGFVVDTRTS 508
Query: 217 NMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKE 276
N ++ + ++DEA R+ E+ GC + SY+ + G C K ++++ F EM +
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 277 KCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADE 336
+ L+P TY I++C L + E+AI+ D N PD TY +++G C+ R +E
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 337 AFDLLDECKKRDISMSEKMYKTLL 360
+ DE +++ + +Y L+
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLI 652
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 140/322 (43%), Gaps = 26/322 (8%)
Query: 63 FTPSDVDRALT---SVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAET 119
+P + DR S +P ALD FR + S++ + +Y +I L A
Sbjct: 88 LSPLEFDRLFPEFRSKVNPKTALDFFRLASDSFSFSFSLRSYCLLIGLLLDANLLSAARV 147
Query: 120 LVEEVIAGAC--------DGSIPLYNSI--IRFCCG---RKFLFSRAFDVYNKMLRSEDC 166
++ +I G D + + +++ + C R+ + +VY + + C
Sbjct: 148 VLIRLINGNVPVLPCGLRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGC 207
Query: 167 KPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAV--------GVIPDTFVLNM 218
L+ + +L N + F C + L ++ + K GV PD ++
Sbjct: 208 YLALDVFPVLANKGM--FPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTT 265
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
I A+ K +V+EA+++F +M G PN +++ + GL GR ++ F ++M E+
Sbjct: 266 AINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERG 325
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
+ P+ TY I+V L +R DA VL +M P+ + Y +++ ++A
Sbjct: 326 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI 385
Query: 339 DLLDECKKRDISMSEKMYKTLL 360
++ D + +S++ Y TL+
Sbjct: 386 EIKDLMVSKGLSLTSSTYNTLI 407
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 123/283 (43%), Gaps = 45/283 (15%)
Query: 113 RYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLET 172
+ +A + +E++ C YN++I CCG+K L AF ++M++ KPD T
Sbjct: 520 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL-DEAFMFLDEMVK-RGLKPDNYT 577
Query: 173 YTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEA 232
Y++L L NK+ A++ K G++PD + +++I K +E
Sbjct: 578 YSILICGLFN-MNKVE------EAIQ-FWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 233 IRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCS 292
F EM +PN Y+++ R C GR++ L ++MK K + P+++TY ++
Sbjct: 630 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Query: 293 LAMDRRFEDA----------------------------------IEVLF-DMLGNSRSPD 317
+++ R E+A +E L +M + P+
Sbjct: 690 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 749
Query: 318 HLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
+TY ++ G R+ EA LL+E +++ I YK +
Sbjct: 750 KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 792
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 13/217 (5%)
Query: 130 DGSIP---LYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNK 186
+G +P Y+ +I CC + + +++M+ S++ +P+ T++YN L+R + +
Sbjct: 604 NGMLPDVYTYSVMIDGCC-KAERTEEGQEFFDEMM-SKNVQPN----TVVYNHLIRAYCR 657
Query: 187 LHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEP 246
L L + MK G+ P++ +IK S V+EA +F EM + G EP
Sbjct: 658 SG----RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 713
Query: 247 NAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVL 306
N + Y+ + G + G++ + +EM K + P+ TY +++ A D +A +L
Sbjct: 714 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 773
Query: 307 FDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDE 343
+M PD +TYK + G ++ EAF DE
Sbjct: 774 NEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 80/159 (50%)
Query: 203 QMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKG 262
+M G+ PD + +++I +V+EAI+ + + G P+ Y+YS + G C+
Sbjct: 565 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 624
Query: 263 RVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYK 322
R +G F+ EM K ++P+T Y ++ + R A+E+ DM SP+ TY
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 684
Query: 323 TVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
++++G+ R +EA L +E + + + Y L+D
Sbjct: 685 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 723
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 77/169 (45%)
Query: 200 LTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLC 259
+ K++ G + D N +I ++DEA EM G +P+ Y+YS + GL
Sbjct: 527 IQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF 586
Query: 260 EKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHL 319
+V + + F+ + K + P TY +++ R E+ E +M+ + P+ +
Sbjct: 587 NMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTV 646
Query: 320 TYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCR 368
Y ++ CR R A +L ++ K + IS + Y +L+ + + R
Sbjct: 647 VYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 107/242 (44%), Gaps = 14/242 (5%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFC--CGRKFLFSRAFDVYN 158
+ T I G + ++A L ++ ++ +N++I CGR + AF
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR---YDEAFMFKE 319
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
KM+ +P L TY++L L R ++ Y L K+M G P+ V N
Sbjct: 320 KMVE-RGMEPTLITYSILVKGLTRA-KRIGDAYFVL-------KEMTKKGFPPNVIVYNN 370
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
+I ++ + +++AI + M G + +Y+ + +G C+ G+ + KEM
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 430
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
+ ++ ++C L F+ A+ + +ML + SP T++ GLC+ + +A
Sbjct: 431 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 490
Query: 339 DL 340
+L
Sbjct: 491 EL 492
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 105/262 (40%), Gaps = 10/262 (3%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
+ + T+I L RY +A E+++ + ++ Y+ +++ K R D Y
Sbjct: 296 VTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAK----RIGDAY- 350
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
+ E K ++YN+L+ F + L+ + M + G+ + N
Sbjct: 351 -FVLKEMTKKGFPPNVIVYNNLIDSFIEAG----SLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
+IK Y K + D A R+ EM G N S++ + LC + L F EM +
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
+ P ++ L + A+E+ F L D T +L GLC + DEAF
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 339 DLLDECKKRDISMSEKMYKTLL 360
+ E R M Y TL+
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLI 547
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 132/291 (45%), Gaps = 20/291 (6%)
Query: 80 LALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSI 139
LA+++ R ++R+ + Y II L A L E+ +I YN +
Sbjct: 246 LAMELLR-KMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNIL 304
Query: 140 IRFCCGRKFLFSRAFDVYNKMLR---SEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHA 196
I C + +D K+LR P++ T+++L +S ++ L
Sbjct: 305 IGGFCN-----AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK--------LRE 351
Query: 197 VRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIAR 256
L K+M G+ PDT +I + K +D+A ++ M GC+PN +++ +
Sbjct: 352 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Query: 257 GLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSP 316
G C+ R++ GL +++M + + T TY ++ + A E+ +M+ P
Sbjct: 412 GYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP 471
Query: 317 DHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVC 367
+ +TYK +L+GLC +++A ++ ++ +K + + +Y + +H +C
Sbjct: 472 NIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII---IHGMC 519
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 113/237 (47%), Gaps = 14/237 (5%)
Query: 140 IRFCCGRKF-LFSRAFDVYNKMLRSE--DCKPD--LETYTLLYNS--------LLRRFNK 186
+ FCC R F FS Y + LRS D K D ++ + + +S R F+
Sbjct: 38 LSFCCERGFSAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSA 97
Query: 187 LHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEP 246
+ Y V +L KQM+ G+ + + L+++I + +C ++ A ++ G EP
Sbjct: 98 IAKTKQY-DLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEP 156
Query: 247 NAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVL 306
N ++S + GLC +GRV++ L M E +P T +V L + + +A+ ++
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216
Query: 307 FDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
M+ P+ +TY VL +C+ + A +LL + ++R+I + Y ++D L
Sbjct: 217 DKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 122/284 (42%), Gaps = 13/284 (4%)
Query: 79 DLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEV-IAGACDGSIPLYN 137
D A+D+FR R T +++ + + ++Y L +++ + G L
Sbjct: 70 DDAIDLFRDMIHSRPL-PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 138 SIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAV 197
I FC RK AF K+++ +P+ T++ L N L +
Sbjct: 129 MINCFCRCRKLCL--AFSAMGKIIKL-GYEPNTITFSTLINGLCLEGR--------VSEA 177
Query: 198 RSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARG 257
L +M +G PD +N ++ + EA+ + +M YGC+PNA +Y +
Sbjct: 178 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNV 237
Query: 258 LCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPD 317
+C+ G+ + ++M+E+ ++ Y II+ L ++A + +M + +
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 297
Query: 318 HLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
+TY ++ G C R D+ LL + KR I+ + + L+D
Sbjct: 298 IITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLID 341
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 108/255 (42%), Gaps = 26/255 (10%)
Query: 91 QRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLF 150
+R N + + +I + ++AE L +E+I Y S+I C L
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL- 384
Query: 151 SRAFDVYNKM---LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVR-----SLTK 202
D N+M + S+ C P++ T+ +L N Y A R L +
Sbjct: 385 ----DKANQMVDLMVSKGCDPNIRTFNILING-------------YCKANRIDDGLELFR 427
Query: 203 QMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKG 262
+M GV+ DT N +I+ + + +++ A +F EM PN +Y + GLC+ G
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487
Query: 263 RVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYK 322
+ L ++++++ + Y II+ + + +DA ++ + P TY
Sbjct: 488 ESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYN 547
Query: 323 TVLEGLCRERRADEA 337
++ GLC++ EA
Sbjct: 548 IMIGGLCKKGPLSEA 562
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 121/275 (44%), Gaps = 14/275 (5%)
Query: 91 QRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLF 150
R + Y ++I +A +V+ +++ CD +I +N +I C +
Sbjct: 361 HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYC-KANRI 419
Query: 151 SRAFDVYNKM-LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGV 209
+++ KM LR + T+ YN+L++ F +L L+ + L ++M + V
Sbjct: 420 DDGLELFRKMSLRG------VVADTVTYNTLIQGFCELG----KLNVAKELFQEMVSRKV 469
Query: 210 IPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLG 269
P+ +++ E ++A+ +F ++ E + Y+ I G+C +V+
Sbjct: 470 PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 529
Query: 270 FYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLF-DMLGNSRSPDHLTYKTVLEGL 328
+ + K ++P TY I++ L +A E+LF M + +PD TY ++
Sbjct: 530 LFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEA-ELLFRKMEEDGHAPDGWTYNILIRAH 588
Query: 329 CRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+ A ++ L++E K+ S+ K ++D L
Sbjct: 589 LGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 109/231 (47%), Gaps = 15/231 (6%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKM 160
Y +I L RR A +VE++ G + YN +I C + + A VY +
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDK----NNAEKVYEML 569
Query: 161 --LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
+ E KPD ++ YN+L+ F K + +V + +QM+ G+ P
Sbjct: 570 TDMEKEGKKPD----SITYNTLISFFGK----HKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYG-CEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEK 277
+I AY E+DEA+++F +MGL+ PN Y+ + + G Q L +EMK K
Sbjct: 622 VIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMK 681
Query: 278 CLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGL 328
+RP+ TY + L + E ++++ +M+ S P+ +T + ++E L
Sbjct: 682 MVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 107/265 (40%), Gaps = 19/265 (7%)
Query: 104 IIKQLNAGRRYQQAETLVEEVIAGACDGSIPL------YNSIIRFCC--GRKFLFSRAFD 155
+I L RR +A + E++ D + +N++I C GR A +
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGR---LKEAEE 391
Query: 156 VYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFV 215
+ +M E C P+ TY L + R L + + +MK + P+
Sbjct: 392 LLVRMKLEERCVPNAVTYNCLIDGYCRAGK--------LETAKEVVSRMKEDEIKPNVVT 443
Query: 216 LNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMK 275
+N I+ + ++ A+ F +M G + N +Y + C V + + +Y++M
Sbjct: 444 VNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKML 503
Query: 276 EKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRAD 335
E P Y ++ L RR DAI V+ + S D L Y ++ C + A+
Sbjct: 504 EAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAE 563
Query: 336 EAFDLLDECKKRDISMSEKMYKTLL 360
+ +++L + +K Y TL+
Sbjct: 564 KVYEMLTDMEKEGKKPDSITYNTLI 588
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 119/290 (41%), Gaps = 13/290 (4%)
Query: 84 IFRWTAQQRSYNHTDLNYLT-IIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRF 142
I R+++ S N +LT I L R A ++ +++ P +N+++
Sbjct: 247 ISRFSSHGVSPNSV---WLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLS- 302
Query: 143 CCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLL--RRFNKLHVCYVYLHAVRSL 200
C GR SR D+ KM + +PD+ T +L N+L RR ++ + + R+
Sbjct: 303 CLGRNMDISRMNDLVLKMDEVK-IRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTD 361
Query: 201 TKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYG-CEPNAYSYSYIARGLC 259
+ + D+ N +I K + EA + M L C PNA +Y+ + G C
Sbjct: 362 DGNV----IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYC 417
Query: 260 EKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHL 319
G++ MKE ++P+ T IV + A+ DM + +
Sbjct: 418 RAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVV 477
Query: 320 TYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCRE 369
TY T++ C ++A ++ + S K+Y L+ L V R+
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 124/289 (42%), Gaps = 16/289 (5%)
Query: 79 DLALDIFRWTAQQRSYNHT-----DLNYLTIIKQL-NAGRRYQQAETLVEEVIAGACDGS 132
D AL++F +R+ + +++ T+I L GR + E LV + C +
Sbjct: 346 DEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPN 405
Query: 133 IPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYV 192
YN +I C R A +V ++M + ++ KP++ T + + R + L++ V
Sbjct: 406 AVTYNCLIDGYC-RAGKLETAKEVVSRM-KEDEIKPNVVTVNTIVGGMCRH-HGLNMAVV 462
Query: 193 YLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYS 252
+ M+ GV + +I A V++A+ + +M GC P+A Y
Sbjct: 463 FFM-------DMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYY 515
Query: 253 YIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGN 312
+ GLC+ R + + +++KE Y +++ E E+L DM
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKE 575
Query: 313 SRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
+ PD +TY T++ + + + ++++ ++ + + Y ++D
Sbjct: 576 GKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVID 624
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 102/254 (40%), Gaps = 35/254 (13%)
Query: 131 GSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSL---------L 181
G++ Y ++I CC + +A Y KML + C PD + Y L + L +
Sbjct: 474 GNVVTYMTLIHACCSVSNV-EKAMYWYEKMLEA-GCSPDAKIYYALISGLCQVRRDHDAI 531
Query: 182 RRFNKLH--------VCYVYL----------HAVRSLTKQMKAVGVIPDTFVLNMIIKAY 223
R KL + Y L V + M+ G PD+ N +I +
Sbjct: 532 RVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFF 591
Query: 224 SKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMK-EKCLRPS 282
K + + R+ +M G +P +Y + C G +++ L +K+M + P+
Sbjct: 592 GKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPN 651
Query: 283 TSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLD 342
T Y I++ + + F A+ + +M P+ TY + + L + + + L+D
Sbjct: 652 TVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMD 711
Query: 343 E-----CKKRDISM 351
E C+ I+M
Sbjct: 712 EMVEQSCEPNQITM 725
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 135/297 (45%), Gaps = 11/297 (3%)
Query: 72 LTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDG 131
L + DP+ AL +F Q+ + H +Y ++I +L R + + ++ V
Sbjct: 56 LKEIEDPEEALSLFH-QYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRC 114
Query: 132 SIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCY 191
L+ +I+ G+ +A DV++K + S DC +++ L N L+
Sbjct: 115 RESLFMGLIQHY-GKAGSVDKAIDVFHK-ITSFDCVRTIQSLNTLINVLVDNGE------ 166
Query: 192 VYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSY 251
L +S K + + P++ N++IK + + + A +VF EM +P+ +Y
Sbjct: 167 --LEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTY 224
Query: 252 SYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLG 311
+ + LC + + ++M +K +RP+ T+ +++ L + +A +++FDM
Sbjct: 225 NSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEY 284
Query: 312 NSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCR 368
P + Y ++ L + R DEA LL E KKR I +Y L++ L CR
Sbjct: 285 RGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECR 341
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 108/250 (43%), Gaps = 10/250 (4%)
Query: 114 YQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETY 173
++ A + +E++ S+ YNS+I F C R +A + M++ +P+ T+
Sbjct: 202 WEAACKVFDEMLEMEVQPSVVTYNSLIGFLC-RNDDMGKAKSLLEDMIKKR-IRPNAVTF 259
Query: 174 TLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAI 233
LL L C + + L M+ G P +++ K +DEA
Sbjct: 260 GLLMKGL--------CCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAK 311
Query: 234 RVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSL 293
+ EM +P+ Y+ + LC + RV + EM+ K +P+ +TY +++
Sbjct: 312 LLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGF 371
Query: 294 AMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSE 353
F+ + VL ML + P T+ ++ GL + D A +L+ K+++S
Sbjct: 372 CRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGS 431
Query: 354 KMYKTLLDDL 363
++ LL DL
Sbjct: 432 GAWQNLLSDL 441
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 24/238 (10%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIR-FCC------GRKFLFS 151
+ Y ++I L +A++L+E++I + + +++ CC +K +F
Sbjct: 222 VTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFD 281
Query: 152 RAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIP 211
+ CKP L Y +L + L +R + + L +MK + P
Sbjct: 282 MEY---------RGCKPGLVNYGILMSDLGKRGR--------IDEAKLLLGEMKKRRIKP 324
Query: 212 DTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFY 271
D + N+++ V EA RV EM + GC+PNA +Y + G C + GL
Sbjct: 325 DVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVL 384
Query: 272 KEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLC 329
M P+ +T+V +V L + A VL M + S ++ +L LC
Sbjct: 385 NAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 110/245 (44%), Gaps = 18/245 (7%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCC--GRKFLFSRAFDV 156
+ + +I ++ +A L EE+ D + YNS+I C GR + D
Sbjct: 245 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD- 303
Query: 157 YNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVL 216
++ ++ C PD+ TY L N + + L ++M G++ DT
Sbjct: 304 ---LMVTKGCLPDVVTYNTLINGFCKSKR--------VDEGTKLFREMAQRGLVGDTITY 352
Query: 217 NMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKE 276
N II+ Y + D A +F M PN +YS + GLC RV + L ++ M++
Sbjct: 353 NTIIQGYFQAGRPDAAQEIFSRMD---SRPNIRTYSILLYGLCMNWRVEKALVLFENMQK 409
Query: 277 KCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADE 336
+ +TY I++ + EDA ++ + PD ++Y T++ G CR+R+ D+
Sbjct: 410 SEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDK 469
Query: 337 AFDLL 341
+ DLL
Sbjct: 470 S-DLL 473
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 149/321 (46%), Gaps = 22/321 (6%)
Query: 48 LEKQFETWVNHLKPGFTPSDVD--RALTSVSDP---DLALDIFRWTAQQRSYNHTDLNYL 102
LE++ + + ++ PS VD + L+ ++ DL + +F + H +Y
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFH-HMEVCGIGHDLYSYN 108
Query: 103 TIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIR-FCCGRKFLFSRAFDVYNKML 161
+I L R+ A ++V +++ + + +S+I FC G +R FD + +
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQG-----NRVFDAIDLVS 163
Query: 162 RSEDC--KPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMI 219
+ E+ +PD+ ++YN+++ K+ + ++ L +M+ GV D N +
Sbjct: 164 KMEEMGFRPDV----VIYNTIIDGSCKIGL----VNDAVELFDRMERDGVRADAVTYNSL 215
Query: 220 IKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCL 279
+ +A R+ +M + PN +++ + ++G+ ++ + Y+EM +C+
Sbjct: 216 VAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCV 275
Query: 280 RPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFD 339
P TY ++ L M R ++A ++L M+ PD +TY T++ G C+ +R DE
Sbjct: 276 DPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTK 335
Query: 340 LLDECKKRDISMSEKMYKTLL 360
L E +R + Y T++
Sbjct: 336 LFREMAQRGLVGDTITYNTII 356
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 121/288 (42%), Gaps = 41/288 (14%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
+ Y +++ L R+ A L+ +++ ++ + ++I ++ FS A +Y
Sbjct: 210 VTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFV-KEGKFSEAMKLYE 268
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAV----GVIPDTF 214
+M R PD+ TY L N L +H KQM + G +PD
Sbjct: 269 EMTR-RCVDPDVFTYNSLINGLC------------MHGRVDEAKQMLDLMVTKGCLPDVV 315
Query: 215 VLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEM 274
N +I + K VDE ++F EM G + +Y+ I +G + GR + + M
Sbjct: 316 TYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 375
Query: 275 KEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRA 334
RP+ TY I++ L M+ R E A+ + +M + D TY V+ G+C+
Sbjct: 376 DS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 432
Query: 335 DEAFDLLDE--------------------CKKRDISMSEKMYKTLLDD 362
++A+DL C+KR S+ +Y+ + +D
Sbjct: 433 EDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQED 480
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 104/245 (42%), Gaps = 10/245 (4%)
Query: 103 TIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLR 162
++I G R A LV ++ + +YN+II C + L + A +++++M R
Sbjct: 144 SLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC-KIGLVNDAVELFDRMER 202
Query: 163 SEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKA 222
+ + D TY L L C L + M ++P+ +I
Sbjct: 203 -DGVRADAVTYNSLVAGL--------CCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 253
Query: 223 YSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPS 282
+ K + EA++++ EM +P+ ++Y+ + GLC GRV++ M K P
Sbjct: 254 FVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPD 313
Query: 283 TSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLD 342
TY ++ +R ++ ++ +M D +TY T+++G + R D A ++
Sbjct: 314 VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS 373
Query: 343 ECKKR 347
R
Sbjct: 374 RMDSR 378
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 65/154 (42%)
Query: 210 IPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLG 269
+P + ++ +K D I +FH M + G + YSY+ + LC R L
Sbjct: 66 LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 125
Query: 270 FYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLC 329
+M + P T ++ R DAI+++ M PD + Y T+++G C
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 185
Query: 330 RERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+ ++A +L D ++ + Y +L+ L
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGL 219
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 81/185 (43%), Gaps = 17/185 (9%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIR--FCCGRKFLFSRAFDV 156
+ Y T+I +R + L E+ G YN+II+ F GR A ++
Sbjct: 315 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP---DAAQEI 371
Query: 157 YNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVL 216
+++M D +P++ TY++L L + + L + M+ + D
Sbjct: 372 FSRM----DSRPNIRTYSILLYGLCMNWR--------VEKALVLFENMQKSEIELDITTY 419
Query: 217 NMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKE 276
N++I K V++A +F + G +P+ SY+ + G C K + ++ Y++M+E
Sbjct: 420 NIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQE 479
Query: 277 KCLRP 281
L P
Sbjct: 480 DGLLP 484
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 96/179 (53%), Gaps = 10/179 (5%)
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPD 212
A ++N ++ E KP L TYT L +L R+ + H++ SL +++ G+ PD
Sbjct: 338 AHSIFNTLIE-EGHKPSLITYTTLVTALTRQ--------KHFHSLLSLISKVEKNGLKPD 388
Query: 213 TFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
T + N II A S+ +D+A+++F +M GC+P A +++ + +G + G++ +
Sbjct: 389 TILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLD 448
Query: 273 EM-KEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
M +++ L+P+ T I+V + R+ E+A +++ M PD +T+ T+ + R
Sbjct: 449 MMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYAR 507
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 90/188 (47%), Gaps = 5/188 (2%)
Query: 175 LLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIR 234
++NSL++ F ++ + V + M+ GV PD + ++ A+S ++
Sbjct: 567 FVFNSLIKGFLNIN----DMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEE 622
Query: 235 VFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLA 294
++ +M G +P+ +++S +A+G G + +M++ +RP+ Y I+
Sbjct: 623 IYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWC 682
Query: 295 MDRRFEDAIEVLFDMLG-NSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSE 353
+ A++V M G SP+ TY+T++ G ++ +A +LL + + +++ +
Sbjct: 683 SAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTR 742
Query: 354 KMYKTLLD 361
K + + D
Sbjct: 743 KTMQLIAD 750
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 112/285 (39%), Gaps = 48/285 (16%)
Query: 78 PDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYN 137
P A IF T + + + + Y T++ L + + +L+ +V L+N
Sbjct: 335 PQEAHSIFN-TLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFN 393
Query: 138 SIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKL---------- 187
+II L +A ++ KM + CKP T +N+L++ + K+
Sbjct: 394 AIINASSESGNL-DQAMKIFEKM-KESGCKPTAST----FNTLIKGYGKIGKLEESSRLL 447
Query: 188 -------------HVCYVYLHA---------VRSLTKQMKAVGVIPDTFVLNMIIKAY-- 223
C + + A ++ +M++ GV PD N + KAY
Sbjct: 448 DMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYAR 507
Query: 224 --SKCLEVDEAI-RVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLR 280
S C D I R+ H +PN + I G CE+G++ + L F+ MKE +
Sbjct: 508 IGSTCTAEDMIIPRMLHNK----VKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVH 563
Query: 281 PSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVL 325
P+ + ++ + EV+ M PD +T+ T++
Sbjct: 564 PNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLM 608
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 69/159 (43%), Gaps = 1/159 (0%)
Query: 203 QMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKG 262
+MK +GV P+ FV N +IK + ++D V M +G +P+ ++S + G
Sbjct: 556 RMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVG 615
Query: 263 RVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYK 322
+ + Y +M E + P + I+ A E A ++L M P+ + Y
Sbjct: 616 DMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYT 675
Query: 323 TVLEGLCRERRADEAFDLLDE-CKKRDISMSEKMYKTLL 360
++ G C +A + + C +S + Y+TL+
Sbjct: 676 QIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLI 714
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 129/300 (43%), Gaps = 27/300 (9%)
Query: 81 ALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSI- 139
AL+ F W ++H ++ + L G ++ + +V ++ SI
Sbjct: 110 ALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASIT 169
Query: 140 -IRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVR 198
+ C G + A + +M + CKPD+ Y + N+L R N R
Sbjct: 170 CLMKCLGEEGFVKEALATFYRM-KEYHCKPDVYAYNTIINALCRVGN--------FKKAR 220
Query: 199 SLTKQMKAVGV--IPDTFVLNMIIKAY------SKCLE-----VDEAIRVFHEMGLYGCE 245
L QM+ G PDT+ ++I +Y + C + + EA R+F EM G
Sbjct: 221 FLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFV 280
Query: 246 PNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEV 305
P+ +Y+ + G C+ R+ + L +++MK K P+ TY + ++ E AIE+
Sbjct: 281 PDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEM 340
Query: 306 LFDM--LGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+ M LG+ P TY ++ L RRA EA DL+ E + + E YK + D L
Sbjct: 341 MRTMKKLGHG-VPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDAL 399
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 141/310 (45%), Gaps = 48/310 (15%)
Query: 81 ALDIFRWTAQQRSYNHTDLN-YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSI 139
+L F W + Y+H + Y +I R++ A L++ + + + SI + +
Sbjct: 133 SLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTIL 192
Query: 140 IRFCCGRKFLFSRAFDVYNKMLRSED--CKPDLETYTLLYNSLLRR---------FNKLH 188
IR R L S A +N+M ED C PD ++++ ++L R+ F+ L
Sbjct: 193 IRRYV-RAGLASEAVHCFNRM---EDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLK 248
Query: 189 VCY-----VYLHAVRS------------LTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDE 231
+ VY + VR + K+MK G+ P+ + +++I A +C ++
Sbjct: 249 DRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISR 308
Query: 232 AIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVC 291
A VF +M GC PNA +++ + R + GR + L Y +MK+ P T TY ++
Sbjct: 309 AHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIE 368
Query: 292 SLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISM 351
+ D E+A++VL M+ + T+ T+ F ++ KKRD++
Sbjct: 369 AHCRDENLENAVKVLNTMIKKKCEVNASTFNTI-------------FRYIE--KKRDVNG 413
Query: 352 SEKMYKTLLD 361
+ +MY +++
Sbjct: 414 AHRMYSKMME 423
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 125/264 (47%), Gaps = 11/264 (4%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKM 160
Y +++ +AE + +E+ + ++ Y+ +I C R SRA DV+ M
Sbjct: 258 YTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALC-RCGQISRAHDVFADM 316
Query: 161 LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMII 220
L S C P+ + +N+L+R +HV V + QMK +G PDT N +I
Sbjct: 317 LDS-GCAPN----AITFNNLMR----VHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLI 367
Query: 221 KAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLR 280
+A+ + ++ A++V + M CE NA +++ I R + +K VN Y +M E
Sbjct: 368 EAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCE 427
Query: 281 PSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDL 340
P+T TY I++ + + +++ +M P+ TY+ ++ C + A+ L
Sbjct: 428 PNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKL 487
Query: 341 LDE-CKKRDISMSEKMYKTLLDDL 363
E +++ ++ S +Y+ +L L
Sbjct: 488 FKEMVEEKCLTPSLSLYEMVLAQL 511
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 123/287 (42%), Gaps = 37/287 (12%)
Query: 80 LALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEV-IAGACDGSIPLYNS 138
L+L+ F W + +H+ + ++ L R+++ AE+++ +V + G D
Sbjct: 97 LSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVD-------- 148
Query: 139 IIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVR 198
L ++ FD R D P R F+ L + +L R
Sbjct: 149 ----------LPAKVFDALLYSYRECDSTP-------------RVFDSLFKTFAHLKKFR 185
Query: 199 SLTK---QMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIA 255
+ T QMK G +P N + + VD A+R + EM PN Y+ + +
Sbjct: 186 NATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVM 245
Query: 256 RGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSR- 314
G C G++++G+ ++M+ R + +Y ++ A++ L +M+G S
Sbjct: 246 SGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALK-LKNMMGKSGL 304
Query: 315 SPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
P+ +T+ T++ G CR + EA + E K +++ + Y TL++
Sbjct: 305 QPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLIN 351
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 108/232 (46%), Gaps = 17/232 (7%)
Query: 136 YNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLH 195
YN++I C K L S A + N M +S +P++ T+ L + R + L
Sbjct: 276 YNTLIAGHC-EKGLLSSALKLKNMMGKS-GLQPNVVTFNTLIHGFCR--------AMKLQ 325
Query: 196 AVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIA 255
+ +MKAV V P+T N +I YS+ + + A R + +M G + + +Y+ +
Sbjct: 326 EASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALI 385
Query: 256 RGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRS 315
GLC++ + + F KE+ ++ L P++ST+ ++ + + + E+ M+ +
Sbjct: 386 FGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCH 445
Query: 316 PDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVC 367
P+ T+ ++ CR D A +L E +R I + + +H VC
Sbjct: 446 PNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRT-------VHQVC 490
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 123/287 (42%), Gaps = 37/287 (12%)
Query: 80 LALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEV-IAGACDGSIPLYNS 138
L+L+ F W + +H+ + ++ L R+++ AE+++ +V + G D
Sbjct: 97 LSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVD-------- 148
Query: 139 IIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVR 198
L ++ FD R D P R F+ L + +L R
Sbjct: 149 ----------LPAKVFDALLYSYRECDSTP-------------RVFDSLFKTFAHLKKFR 185
Query: 199 SLTK---QMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIA 255
+ T QMK G +P N + + VD A+R + EM PN Y+ + +
Sbjct: 186 NATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVM 245
Query: 256 RGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSR- 314
G C G++++G+ ++M+ R + +Y ++ A++ L +M+G S
Sbjct: 246 SGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALK-LKNMMGKSGL 304
Query: 315 SPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
P+ +T+ T++ G CR + EA + E K +++ + Y TL++
Sbjct: 305 QPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLIN 351
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 108/232 (46%), Gaps = 17/232 (7%)
Query: 136 YNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLH 195
YN++I C K L S A + N M +S +P++ T+ L + R + L
Sbjct: 276 YNTLIAGHC-EKGLLSSALKLKNMMGKS-GLQPNVVTFNTLIHGFCR--------AMKLQ 325
Query: 196 AVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIA 255
+ +MKAV V P+T N +I YS+ + + A R + +M G + + +Y+ +
Sbjct: 326 EASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALI 385
Query: 256 RGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRS 315
GLC++ + + F KE+ ++ L P++ST+ ++ + + + E+ M+ +
Sbjct: 386 FGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCH 445
Query: 316 PDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVC 367
P+ T+ ++ CR D A +L E +R I + + +H VC
Sbjct: 446 PNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRT-------VHQVC 490
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 116/247 (46%), Gaps = 10/247 (4%)
Query: 91 QRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLF 150
+R N + + +I + +AE L +E+I + D I Y+S+I C L
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL- 381
Query: 151 SRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVI 210
A ++ M+ S+DC P++ TY N+L+ F K + L ++M G++
Sbjct: 382 DEAKHMFELMI-SKDCFPNVVTY----NTLINGFCKAK----RIDEGVELFREMSQRGLV 432
Query: 211 PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGF 270
+T +I + + + D A VF +M G PN +Y+ + GLC+ G++ + +
Sbjct: 433 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 492
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
++ ++ + P+ TY I++ + + ED ++ + PD + Y T++ G CR
Sbjct: 493 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCR 552
Query: 331 ERRADEA 337
+ +EA
Sbjct: 553 KGLKEEA 559
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 132/296 (44%), Gaps = 11/296 (3%)
Query: 68 VDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAG 127
V L D DLA ++ + + + Y T+I L R A L E+
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI-YSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 128 ACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKL 187
++ Y+S+I C + +S A + + M+ + P++ T+ L ++ ++
Sbjct: 290 GVRPNVITYSSLISCLCNYE-RWSDASRLLSDMIERK-INPNVVTFNALIDAFVKEGK-- 345
Query: 188 HVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPN 247
L L +M + PD F + +I + +DEA +F M C PN
Sbjct: 346 ------LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 399
Query: 248 AYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLF 307
+Y+ + G C+ R+++G+ ++EM ++ L +T TY ++ R ++A V
Sbjct: 400 VVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 459
Query: 308 DMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
M+ + P+ +TY T+L+GLC+ + ++A + + ++ + + Y +++ +
Sbjct: 460 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 515
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 107/225 (47%), Gaps = 11/225 (4%)
Query: 150 FSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLR--------RFNKLHVCYVYLHA---VR 198
FS Y ++LR+ L+ L+ +++ FNKL + V
Sbjct: 46 FSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVI 105
Query: 199 SLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGL 258
SL ++M+ +G+ + + N++I + + ++ A+ + +M G EP+ + S + G
Sbjct: 106 SLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGY 165
Query: 259 CEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDH 318
C R++ + +M E RP T T+ ++ L + + +A+ ++ M+ P+
Sbjct: 166 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 225
Query: 319 LTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+TY V+ GLC+ D AF+LL++ + I + +Y T++D L
Sbjct: 226 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL 270
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 20/231 (8%)
Query: 136 YNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLH 195
YN +I C R+ S A + KM++ +P + T + L N Y H
Sbjct: 123 YNILINCFC-RRSQISLALALLGKMMKL-GYEPSIVTLSSLLNG-------------YCH 167
Query: 196 AVR-----SLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYS 250
R +L QM +G PDT +I + EA+ + M GC+PN +
Sbjct: 168 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 227
Query: 251 YSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDML 310
Y + GLC++G ++ +M+ + + Y ++ SL R +DA+ + +M
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
Query: 311 GNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
P+ +TY +++ LC R +A LL + +R I+ + + L+D
Sbjct: 288 NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID 338
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 119/254 (46%), Gaps = 16/254 (6%)
Query: 111 GRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFD---VYNKMLRSEDCK 167
G+R A LV++++ + ++I FL ++A + + ++M++ C+
Sbjct: 168 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGL----FLHNKASEAVALVDRMVQ-RGCQ 222
Query: 168 PDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCL 227
P+L TY ++ N L +R + + +L +M+A + + + + +I + K
Sbjct: 223 PNLVTYGVVVNGLCKRGD--------IDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYR 274
Query: 228 EVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYV 287
D+A+ +F EM G PN +YS + LC R + +M E+ + P+ T+
Sbjct: 275 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFN 334
Query: 288 IIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKR 347
++ + + + +A ++ +M+ S PD TY +++ G C R DEA + + +
Sbjct: 335 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 394
Query: 348 DISMSEKMYKTLLD 361
D + Y TL++
Sbjct: 395 DCFPNVVTYNTLIN 408
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 134/306 (43%), Gaps = 18/306 (5%)
Query: 66 SDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVI 125
S V +L D AL++F + + + Y ++I L R+ A L+ ++I
Sbjct: 264 STVIDSLCKYRHEDDALNLFT-EMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 126 AGACDGSIPLYNSII-RFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRF 184
+ ++ +N++I F K + A +Y++M++ PD+ TY+ L N
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLV--EAEKLYDEMIK-RSIDPDIFTYSSLINGF---- 375
Query: 185 NKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGC 244
+ L + + + M + P+ N +I + K +DE + +F EM G
Sbjct: 376 ----CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGL 431
Query: 245 EPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIE 304
N +Y+ + G + + +K+M + P+ TY ++ L + + E A+
Sbjct: 432 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM- 490
Query: 305 VLFDMLGNSR-SPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
V+F+ L S+ P TY ++EG+C+ + ++ +DL + + +Y T++
Sbjct: 491 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGF 550
Query: 364 HYVCRE 369
CR+
Sbjct: 551 ---CRK 553
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 84/192 (43%), Gaps = 8/192 (4%)
Query: 169 DLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLE 228
+L TY +L N RR + +L +M +G P L+ ++ Y
Sbjct: 119 NLYTYNILINCFCRRSQ--------ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 229 VDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVI 288
+ +A+ + +M G P+ +++ + GL + ++ + M ++ +P+ TY +
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 289 IVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRD 348
+V L + A +L M + + Y TV++ LC+ R D+A +L E + +
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 349 ISMSEKMYKTLL 360
+ + Y +L+
Sbjct: 291 VRPNVITYSSLI 302
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 100/230 (43%), Gaps = 10/230 (4%)
Query: 91 QRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLF 150
+RS + Y ++I R +A+ + E +I+ C ++ YN++I C K +
Sbjct: 358 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRI- 416
Query: 151 SRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVI 210
+++ +M + L T+ Y +L+ F + C + + KQM + GV
Sbjct: 417 DEGVELFREM-----SQRGLVGNTVTYTTLIHGFFQARDC----DNAQMVFKQMVSDGVH 467
Query: 211 PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGF 270
P+ N ++ K ++++A+ VF + EP Y+Y+ + G+C+ G+V G
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLT 320
+ + K ++P Y ++ E+A + M + PD T
Sbjct: 528 FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 130/271 (47%), Gaps = 19/271 (7%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
+ + T++ L R QA LV+ ++ +G P Y +II C S A ++ +
Sbjct: 11 VTFTTLMNGLCCEGRVLQALALVDRMVE---EGHQP-YGTIINGLCKMGDTES-ALNLLS 65
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNK-LHVCYVYLHAVRSLTKQMKAVGVIPDTFVLN 217
KM + ++ + ++YN+++ R K H ++HA ++L +M G+ PD +
Sbjct: 66 KMEETH-----IKAHVVIYNAIIDRLCKDGH----HIHA-QNLFTEMHDKGIFPDVITYS 115
Query: 218 MIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEK 277
+I ++ + +A ++ +M P+ ++S + L ++G+V++ Y +M +
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 278 CLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEA 337
+ P+T TY ++ R DA +L M S SPD +T+ T++ G C+ +R D
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 338 FDLLDECKKRDISMSEKMYKTLLDDLHYVCR 368
++ E +R I + Y TL +H C+
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTL---IHGFCQ 263
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 132/291 (45%), Gaps = 12/291 (4%)
Query: 59 LKPGFTP-SDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQA 117
++ G P + L + D + AL++ + H + Y II +L + A
Sbjct: 37 VEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVI-YNAIIDRLCKDGHHIHA 95
Query: 118 ETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLY 177
+ L E+ + Y+ +I C R ++ A + M+ + PD+ T++ L
Sbjct: 96 QNLFTEMHDKGIFPDVITYSGMIDSFC-RSGRWTDAEQLLRDMIERQ-INPDVVTFSALI 153
Query: 178 NSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFH 237
N+L++ +Y +R G+ P T N +I + K +++A R+
Sbjct: 154 NALVKEGKVSEAEEIYGDMLRR--------GIFPTTITYNSMIDGFCKQDRLNDAKRMLD 205
Query: 238 EMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDR 297
M C P+ ++S + G C+ RV+ G+ + EM + + +T TY ++
Sbjct: 206 SMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVG 265
Query: 298 RFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRD 348
+ A ++L M+ + +P+++T++++L LC ++ +AF +L++ +K +
Sbjct: 266 DLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSE 316
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 114/266 (42%), Gaps = 16/266 (6%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSII-RFCCGRKFLFSRAFDVYNK 159
Y TII L + A L+ ++ + +YN+II R C + ++ +++ +
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQ--NLFTE 101
Query: 160 MLRSEDCKPDLETYTLLYNSLLR--RFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLN 217
M + PD+ TY+ + +S R R+ L + M + PD +
Sbjct: 102 M-HDKGIFPDVITYSGMIDSFCRSGRWTD----------AEQLLRDMIERQINPDVVTFS 150
Query: 218 MIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEK 277
+I A K +V EA ++ +M G P +Y+ + G C++ R+N M K
Sbjct: 151 ALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASK 210
Query: 278 CLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEA 337
P T+ ++ +R ++ +E+ +M + +TY T++ G C+ D A
Sbjct: 211 SCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAA 270
Query: 338 FDLLDECKKRDISMSEKMYKTLLDDL 363
DLL+ ++ + ++++L L
Sbjct: 271 QDLLNVMISSGVAPNYITFQSMLASL 296
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 111/247 (44%), Gaps = 10/247 (4%)
Query: 100 NYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNK 159
YL +++ L +R+ + + ++++ S+ YN++I C + + + A ++
Sbjct: 392 GYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAA--MFLT 449
Query: 160 MLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMI 219
++ P+L T+ + R + + V + +++ G PD ++I
Sbjct: 450 EMQDRGISPNLVTFNTFLSGYSVRGD--------VKKVHGVLEKLLVHGFKPDVITFSLI 501
Query: 220 IKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCL 279
I + E+ +A F EM +G EPN +Y+ + R C G ++ + + +MKE L
Sbjct: 502 INCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGL 561
Query: 280 RPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFD 339
P Y + S R+ + A E+L ML PD+ TY T+++ L R EA +
Sbjct: 562 SPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEARE 621
Query: 340 LLDECKK 346
+ ++
Sbjct: 622 MFSSIER 628
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 86/158 (54%)
Query: 203 QMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKG 262
Q+ +G+ P T + N +I A K +D A F +M GC+P+ ++Y+ + G+C+KG
Sbjct: 170 QISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKG 229
Query: 263 RVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYK 322
V++ + K+M+++ RP+ TY I++ + R ++A++ L M +P+ T +
Sbjct: 230 VVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIR 289
Query: 323 TVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
T + G+ R +AF++L ++D ++ Y +L
Sbjct: 290 TFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVL 327
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 95/234 (40%), Gaps = 27/234 (11%)
Query: 163 SEDCKPDLETYTLLYNSLL--RRFNK-------------LHVCYVYLHAVRSLTK----- 202
S KP Y +L +LL +RF++ L Y Y + L K
Sbjct: 383 SRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIE 442
Query: 203 -------QMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIA 255
+M+ G+ P+ N + YS +V + V ++ ++G +P+ ++S I
Sbjct: 443 NAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLII 502
Query: 256 RGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRS 315
LC + +KEM E + P+ TY I++ S + ++++ M N S
Sbjct: 503 NCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLS 562
Query: 316 PDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCRE 369
PD Y ++ C+ R+ +A +LL + + Y TL+ L RE
Sbjct: 563 PDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRE 616
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 8/181 (4%)
Query: 167 KPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKC 226
KP Y + ++L++ N L + Y+ +QM++ G PD F N++I K
Sbjct: 177 KPSTRLYNAVIDALVKS-NSLDLAYLKF-------QQMRSDGCKPDRFTYNILIHGVCKK 228
Query: 227 LEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTY 286
VDEAIR+ +M G PN ++Y+ + G GRV++ L + M+ + L P+ +T
Sbjct: 229 GVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATI 288
Query: 287 VIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKK 346
V + A EVL + + + Y VL L A E L + +
Sbjct: 289 RTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGE 348
Query: 347 R 347
R
Sbjct: 349 R 349
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 73/188 (38%), Gaps = 35/188 (18%)
Query: 208 GVIPDTFVLNMIIKAYSKCLEVDEAIRVF------------------------------- 236
G IPD+ N + K ++ E R+F
Sbjct: 350 GYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEG 409
Query: 237 ----HEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCS 292
+MG+ G + YSY+ + LC+ R+ F EM+++ + P+ T+ +
Sbjct: 410 DRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSG 469
Query: 293 LAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMS 352
++ + VL +L + PD +T+ ++ LCR + +AFD E + I +
Sbjct: 470 YSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPN 529
Query: 353 EKMYKTLL 360
E Y L+
Sbjct: 530 EITYNILI 537
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 10/152 (6%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
+ + II L + + A +E++ + + YN +IR CC R+ ++
Sbjct: 496 ITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDT-DRSVKLFA 554
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
KM + PDL YN+ ++ F K+ + L K M +G+ PD F +
Sbjct: 555 KM-KENGLSPDLYA----YNATIQSFCKMR----KVKKAEELLKTMLRIGLKPDNFTYST 605
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYS 250
+IKA S+ EA +F + +GC P++Y+
Sbjct: 606 LIKALSESGRESEAREMFSSIERHGCVPDSYT 637
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 133/301 (44%), Gaps = 12/301 (3%)
Query: 51 QFETWVNHLKPGFTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNA 110
+ + + L P + S V L + AL FRWT + H ++ +IK L
Sbjct: 103 RLQNSIRDLVPEWDHSLVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGE 162
Query: 111 GRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDL 170
+ A ++ ++ ++ +I G+ + + ++ KM + + +
Sbjct: 163 VSKLNHARCILLDMPEKGVPWDEDMFVVLIE-SYGKAGIVQESVKIFQKM-KDLGVERTI 220
Query: 171 ETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVD 230
++Y L+ +LRR Y+ A R K M + GV P N+++ + L ++
Sbjct: 221 KSYNSLFKVILRRGR-------YMMAKRYFNK-MVSEGVEPTRHTYNLMLWGFFLSLRLE 272
Query: 231 EAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIV 290
A+R F +M G P+ +++ + G C ++++ + EMK + PS +Y ++
Sbjct: 273 TALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMI 332
Query: 291 CS-LAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDI 349
LA+DR +D + + +M + P+ TY T+L GLC + EA ++L + I
Sbjct: 333 KGYLAVDR-VDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHI 391
Query: 350 S 350
+
Sbjct: 392 A 392
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%)
Query: 194 LHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSY 253
L+ R + M GV D + ++I++Y K V E++++F +M G E SY+
Sbjct: 166 LNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNS 225
Query: 254 IARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNS 313
+ + + +GR ++ +M + + P+ TY +++ + R E A+ DM
Sbjct: 226 LFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRG 285
Query: 314 RSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
SPD T+ T++ G CR ++ DEA L E K I S Y T++
Sbjct: 286 ISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMI 332
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 142/348 (40%), Gaps = 47/348 (13%)
Query: 58 HLKPGFTPSDVDRALTSVSDPDLALDIFR----------------WTAQQRSYNHTDLNY 101
H +P + AL + P ++ +F W +++ +
Sbjct: 108 HSEPSNMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMKCSPDSKAC 167
Query: 102 LTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKML 161
L+I+ L RR+ + +I+ + +Y + + CC ++ L+S+ + ++M
Sbjct: 168 LSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQ-CCFKQGLYSKKEKLLDEM- 225
Query: 162 RSEDCKPDLETYTLL---------------YNSLLRRFNKLHVCYVY------------L 194
S KP++ YT+ L+++ L Y Y +
Sbjct: 226 TSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNV 285
Query: 195 HAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYI 254
L K++ ++P+ V ++ + K E+ A +F M +G +PN Y Y+ +
Sbjct: 286 RQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCL 345
Query: 255 ARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSR 314
G C+ G + + +G EM+ L P TY I++ L ++ + +A LF + N R
Sbjct: 346 IHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEA-NRLFQKMKNER 404
Query: 315 S-PDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
P TY +++ G C+E ++A DL E + + + TL+D
Sbjct: 405 IFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLID 452
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 113/261 (43%), Gaps = 10/261 (3%)
Query: 103 TIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLR 162
T++ R A +L ++ D ++ +YN +I C + A + ++M
Sbjct: 309 TLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNML-EAVGLLSEM-E 366
Query: 163 SEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKA 222
S + PD+ TYT+L N L + L ++MK + P + N +I
Sbjct: 367 SLNLSPDVFTYTILINGLCIEDQ--------VAEANRLFQKMKNERIFPSSATYNSLIHG 418
Query: 223 YSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPS 282
Y K +++A+ + EM G EPN ++S + G C + +G Y EM K + P
Sbjct: 419 YCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPD 478
Query: 283 TSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLD 342
TY ++ + + ++A+ + DML P+ T+ +++G +E R A D
Sbjct: 479 VVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQ 538
Query: 343 ECKKRDISMSEKMYKTLLDDL 363
E ++ + + L++ L
Sbjct: 539 ENNQQRSCWNHVGFTCLIEGL 559
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 135/328 (41%), Gaps = 45/328 (13%)
Query: 81 ALDIFRWTAQQRSYNHTDL-NYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIP----- 134
A +F +++ R DL ++ +I L +Y A L++ +I S P
Sbjct: 57 AFKLFETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSH 116
Query: 135 -LYNSI-----IRFCCG------RKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLR 182
L+N++ +F G +FL F+ + R C PD + + N L+R
Sbjct: 117 RLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMKCSPDSKACLSILNGLVR 176
Query: 183 R--FNKLHVCY-----------VYLHAV--------------RSLTKQMKAVGVIPDTFV 215
R F+ + V Y V+++ V L +M ++G+ P+ ++
Sbjct: 177 RRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYI 236
Query: 216 LNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMK 275
+ I + +++EA ++F M +G PN Y+YS + G C+ G V Q G YKE+
Sbjct: 237 YTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEIL 296
Query: 276 EKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRAD 335
L P+ + +V R A + M+ P+ Y ++ G C+
Sbjct: 297 VAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNML 356
Query: 336 EAFDLLDECKKRDISMSEKMYKTLLDDL 363
EA LL E + ++S Y L++ L
Sbjct: 357 EAVGLLSEMESLNLSPDVFTYTILINGL 384
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 101/210 (48%), Gaps = 9/210 (4%)
Query: 152 RAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIP 211
+A+ +Y ++L +E L +++ +L+ F K L RSL M GV P
Sbjct: 287 QAYGLYKEILVAE-----LLPNVVVFGTLVDGFCKAR----ELVTARSLFVHMVKFGVDP 337
Query: 212 DTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFY 271
+ +V N +I + K + EA+ + EM P+ ++Y+ + GLC + +V + +
Sbjct: 338 NLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLF 397
Query: 272 KEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRE 331
++MK + + PS++TY ++ + E A+++ +M + P+ +T+ T+++G C
Sbjct: 398 QKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNV 457
Query: 332 RRADEAFDLLDECKKRDISMSEKMYKTLLD 361
R A L E + I Y L+D
Sbjct: 458 RDIKAAMGLYFEMTIKGIVPDVVTYTALID 487
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 125/271 (46%), Gaps = 28/271 (10%)
Query: 72 LTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQL-NAGRRYQQAETLVEEVIAGACD 130
L+ + +L+ D+F +T +N L I Q+ A R +Q+ + E + +
Sbjct: 362 LSEMESLNLSPDVFTYTIL--------INGLCIEDQVAEANRLFQKMKN--ERIFPSSAT 411
Query: 131 GSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVC 190
YNS+I C +++ +A D+ ++M S +P++ T++ L + C
Sbjct: 412 -----YNSLIHGYC-KEYNMEQALDLCSEMTAS-GVEPNIITFSTLIDG---------YC 455
Query: 191 YVY-LHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAY 249
V + A L +M G++PD +I A+ K + EA+R++ +M G PN +
Sbjct: 456 NVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDH 515
Query: 250 SYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDM 309
+++ + G ++GR++ + FY+E ++ + + ++ L + A DM
Sbjct: 516 TFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDM 575
Query: 310 LGNSRSPDHLTYKTVLEGLCRERRADEAFDL 340
+PD +Y ++L+G +E+R + L
Sbjct: 576 RSCGITPDICSYVSMLKGHLQEKRITDTMML 606
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 11/229 (4%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKM 160
Y +I L RR A +VE++ G + YN +I C + + +++ M
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNT-EKVYEMLTDM 572
Query: 161 LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMII 220
E KPD ++ YN+L+ F K + +V + +QM+ G+ P +I
Sbjct: 573 -EKEGKKPD----SITYNTLISFFGK----HKDFESVERMMEQMREDGLDPTVTTYGAVI 623
Query: 221 KAYSKCLEVDEAIRVFHEMGLYG-CEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCL 279
AY E+DEA+++F +MGL+ PN Y+ + + G Q L +EMK K +
Sbjct: 624 DAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMV 683
Query: 280 RPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGL 328
RP+ TY + L + E ++++ +M+ S P+ +T + ++E L
Sbjct: 684 RPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 93/227 (40%), Gaps = 13/227 (5%)
Query: 136 YNSIIRFCC--GRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVY 193
+N++I C GR A ++ +M E C P+ TY L + R
Sbjct: 373 FNTLIDGLCKVGR---LKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGK-------- 421
Query: 194 LHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSY 253
L + + +MK + P+ +N I+ + ++ A+ F +M G + N +Y
Sbjct: 422 LETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMT 481
Query: 254 IARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNS 313
+ C V + + +Y++M E P Y ++ L RR DAI V+ +
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541
Query: 314 RSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
S D L Y ++ C + ++ +++L + +K Y TL+
Sbjct: 542 FSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLI 588
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 119/290 (41%), Gaps = 13/290 (4%)
Query: 84 IFRWTAQQRSYNHTDLNYLT-IIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRF 142
I R+++ S N +LT I L R A ++ +++ P +N+++
Sbjct: 247 ISRFSSHGVSPNSV---WLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLS- 302
Query: 143 CCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLL--RRFNKLHVCYVYLHAVRSL 200
C GR SR D+ KM + +PD+ T +L N+L RR ++ + + R+
Sbjct: 303 CLGRNMDISRMNDLVLKMDEVK-IRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTD 361
Query: 201 TKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYG-CEPNAYSYSYIARGLC 259
+ + D+ N +I K + EA + M L C PNA +Y+ + G C
Sbjct: 362 DGNV----IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYC 417
Query: 260 EKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHL 319
G++ MKE ++P+ T IV + A+ DM + +
Sbjct: 418 RAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVV 477
Query: 320 TYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCRE 369
TY T++ C ++A ++ + S K+Y L+ L V R+
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 124/289 (42%), Gaps = 16/289 (5%)
Query: 79 DLALDIFRWTAQQRSYNHT-----DLNYLTIIKQL-NAGRRYQQAETLVEEVIAGACDGS 132
D AL++F +R+ + +++ T+I L GR + E LV + C +
Sbjct: 346 DEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPN 405
Query: 133 IPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYV 192
YN +I C R A +V ++M + ++ KP++ T + + R + L++ V
Sbjct: 406 AVTYNCLIDGYC-RAGKLETAKEVVSRM-KEDEIKPNVVTVNTIVGGMCRH-HGLNMAVV 462
Query: 193 YLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYS 252
+ M+ GV + +I A V++A+ + +M GC P+A Y
Sbjct: 463 FFM-------DMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYY 515
Query: 253 YIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGN 312
+ GLC+ R + + +++KE Y +++ E E+L DM
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKE 575
Query: 313 SRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
+ PD +TY T++ + + + ++++ ++ + + Y ++D
Sbjct: 576 GKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVID 624
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 102/254 (40%), Gaps = 35/254 (13%)
Query: 131 GSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSL---------L 181
G++ Y ++I CC + +A Y KML + C PD + Y L + L +
Sbjct: 474 GNVVTYMTLIHACCSVSNV-EKAMYWYEKMLEA-GCSPDAKIYYALISGLCQVRRDHDAI 531
Query: 182 RRFNKLH--------VCYVYL----------HAVRSLTKQMKAVGVIPDTFVLNMIIKAY 223
R KL + Y L V + M+ G PD+ N +I +
Sbjct: 532 RVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFF 591
Query: 224 SKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMK-EKCLRPS 282
K + + R+ +M G +P +Y + C G +++ L +K+M + P+
Sbjct: 592 GKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPN 651
Query: 283 TSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLD 342
T Y I++ + + F A+ + +M P+ TY + + L + + + L+D
Sbjct: 652 TVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMD 711
Query: 343 E-----CKKRDISM 351
E C+ I+M
Sbjct: 712 EMVEQSCEPNQITM 725
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 140/320 (43%), Gaps = 20/320 (6%)
Query: 50 KQF----ETWVNHLKPGFTPSD-----VDRALTSVSDPDLALDIFRWTAQQRSYNHTDLN 100
KQF ++N L+ F PS +A +SD L++F R Y +
Sbjct: 158 KQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFI- 216
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKM 160
Y +I L G+R AE L +E++A S+ YN++I C + ++F V +M
Sbjct: 217 YNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYC-KAGNPEKSFKVRERM 275
Query: 161 LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMII 220
+++ +P L T +N+LL+ K + + ++ K+MK +G +PD F +++
Sbjct: 276 -KADHIEPSLIT----FNTLLKGLFKAGM----VEDAENVLKEMKDLGFVPDAFTFSILF 326
Query: 221 KAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLR 280
YS + + A+ V+ G + NAY+ S + LC++G++ + K L
Sbjct: 327 DGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLV 386
Query: 281 PSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDL 340
P+ Y ++ A + M PDHL Y ++ C + A
Sbjct: 387 PNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKE 446
Query: 341 LDECKKRDISMSEKMYKTLL 360
+++ K + +S S + Y L+
Sbjct: 447 VNKMKLKGVSPSVETYNILI 466
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 109/250 (43%), Gaps = 11/250 (4%)
Query: 111 GRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDL 170
G+ + E L E+ G + +YN++I C + L + + + + KPD
Sbjct: 368 GKIEKAEEILGREMAKGLVPNEV-IYNTMIDGYCRKGDLVGARMKI--EAMEKQGMKPD- 423
Query: 171 ETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVD 230
L YN L+RRF +L + +MK GV P N++I Y + E D
Sbjct: 424 ---HLAYNCLIRRFCELG----EMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFD 476
Query: 231 EAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIV 290
+ + EM G PN SY + LC+ ++ + ++M+++ + P Y +++
Sbjct: 477 KCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLI 536
Query: 291 CSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDIS 350
+ EDA +ML + +TY T+++GL + EA DLL E ++ +
Sbjct: 537 DGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLK 596
Query: 351 MSEKMYKTLL 360
Y +L+
Sbjct: 597 PDVFTYNSLI 606
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 107/262 (40%), Gaps = 14/262 (5%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
++Y T+I L G + +A+ + ++ + +YN +I CC + + AF
Sbjct: 495 VSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKI-EDAFRFSK 553
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
+ML K +E + YN+L+ + L L ++ G+ PD F N
Sbjct: 554 EML-----KKGIELNLVTYNTLIDGLSMTG----KLSEAEDLLLEISRKGLKPDVFTYNS 604
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
+I Y V I ++ EM G +P +Y ++ LC K + + EM
Sbjct: 605 LISGYGFAGNVQRCIALYEEMKRSGIKPTLKTY-HLLISLCTKEGIELTERLFGEMS--- 660
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
L+P Y ++ A+ E A + M+ S D TY +++ G + + E
Sbjct: 661 LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVR 720
Query: 339 DLLDECKKRDISMSEKMYKTLL 360
L+DE R++ Y ++
Sbjct: 721 SLIDEMNAREMEPEADTYNIIV 742
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%)
Query: 208 GVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQG 267
G+ P + L +++ K + I VF + P+ + Y + + V +G
Sbjct: 139 GIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKG 198
Query: 268 LGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEG 327
L + MK + PS Y +++ L +R DA ++ +ML P +TY T+++G
Sbjct: 199 LELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDG 258
Query: 328 LCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
C+ +++F + + K I S + TLL L
Sbjct: 259 YCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGL 294
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 94/211 (44%), Gaps = 9/211 (4%)
Query: 151 SRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVI 210
+ +++N+M + + P + Y +L + L + ++ L +M A ++
Sbjct: 196 GKGLELFNRM-KHDRIYPSVFIYNVLIDGLCKGKR--------MNDAEQLFDEMLARRLL 246
Query: 211 PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGF 270
P N +I Y K +++ +V M EP+ +++ + +GL + G V
Sbjct: 247 PSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENV 306
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
KEMK+ P T+ I+ + + + E A+ V + + + T +L LC+
Sbjct: 307 LKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCK 366
Query: 331 ERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
E + ++A ++L + + +E +Y T++D
Sbjct: 367 EGKIEKAEEILGREMAKGLVPNEVIYNTMID 397
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 100/248 (40%), Gaps = 31/248 (12%)
Query: 149 LFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRS--------- 199
+ S A D++ LR+E P ++ TLL + L++ V+L+ + S
Sbjct: 124 MISEAADLFFA-LRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMY 182
Query: 200 ------------------LTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGL 241
L +MK + P F+ N++I K +++A ++F EM
Sbjct: 183 GKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLA 242
Query: 242 YGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFED 301
P+ +Y+ + G C+ G + + MK + PS T+ ++ L ED
Sbjct: 243 RRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVED 302
Query: 302 AIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
A VL +M PD T+ + +G +A+ A + + + M+ LL+
Sbjct: 303 AENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLN 362
Query: 362 DLHYVCRE 369
L C+E
Sbjct: 363 AL---CKE 367
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 109/258 (42%), Gaps = 35/258 (13%)
Query: 83 DIFRWTAQ--QRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSII 140
D FR++ + ++ + Y T+I L+ + +AE L+ E+ + YNS+I
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606
Query: 141 RFCCGRKFL--FSRAFDVYNKMLRSEDCKPDLETYTLLYN-------SLLRR-------- 183
G F R +Y +M RS KP L+TY LL + L R
Sbjct: 607 ---SGYGFAGNVQRCIALYEEMKRS-GIKPTLKTYHLLISLCTKEGIELTERLFGEMSLK 662
Query: 184 -----FNKLHVCYVY---LHAVRSLTKQM--KAVGVIPDTFVLNMIIKAYSKCLEVDEAI 233
+N + CY + +L KQM K++G+ T+ N +I K ++ E
Sbjct: 663 PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTY--NSLILGQLKVGKLCEVR 720
Query: 234 RVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSL 293
+ EM EP A +Y+ I +G CE +Y+EM+EK +V L
Sbjct: 721 SLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGL 780
Query: 294 AMDRRFEDAIEVLFDMLG 311
+ R ++A V+ +M G
Sbjct: 781 KEEWRSKEAEIVISEMNG 798
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 143/311 (45%), Gaps = 14/311 (4%)
Query: 62 GFTPS--DVDRALTSV--SDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQA 117
GF PS + L SV S D+++ F +R + +I L A ++++
Sbjct: 193 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 252
Query: 118 ETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLY 177
L++++ +I YN+++ + C +K F A ++ + M +S+ D+ TY +L
Sbjct: 253 SYLMQKMEKSGYAPTIVTYNTVLHWYC-KKGRFKAAIELLDHM-KSKGVDADVCTYNMLI 310
Query: 178 NSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFH 237
+ L R N++ Y+ L R + K+M + P+ N +I +S +V A ++ +
Sbjct: 311 HDLCRS-NRIAKGYLLL---RDMRKRM----IHPNEVTYNTLINGFSNEGKVLIASQLLN 362
Query: 238 EMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDR 297
EM +G PN +++ + G +G + L + M+ K L PS +Y +++ L +
Sbjct: 363 EMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNA 422
Query: 298 RFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYK 357
F+ A M N +TY +++GLC+ DEA LL+E K I Y
Sbjct: 423 EFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYS 482
Query: 358 TLLDDLHYVCR 368
L++ V R
Sbjct: 483 ALINGFCKVGR 493
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 111/266 (41%), Gaps = 11/266 (4%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
+ Y +I R++ A+ +V + + +Y+++I CC R A +Y
Sbjct: 479 VTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC-RMGCLKEAIRIYE 537
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
M+ E D T+ +L SL + + + M + G++P+T +
Sbjct: 538 AMIL-EGHTRDHFTFNVLVTSLCKAGK--------VAEAEEFMRCMTSDGILPNTVSFDC 588
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
+I Y E +A VF EM G P ++Y + +GLC+ G + + F K +
Sbjct: 589 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 648
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
T Y ++ ++ A+ + +M+ S PD TY +++ GLCR+ + A
Sbjct: 649 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 708
Query: 339 DLLDECKKRDISMSEK-MYKTLLDDL 363
E + R + K MY +D +
Sbjct: 709 LFAKEAEARGNVLPNKVMYTCFVDGM 734
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 3/155 (1%)
Query: 215 VLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEM 274
V +++I+ Y + + +++ +F MGLYG P+ Y+ + I + + G F KEM
Sbjct: 165 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 224
Query: 275 KEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRA 334
++ + P +T+ I++ L + FE + ++ M + +P +TY TVL C++ R
Sbjct: 225 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 284
Query: 335 DEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCRE 369
A +LLD K + + Y L+ DL CR
Sbjct: 285 KAAIELLDHMKSKGVDADVCTYNMLIHDL---CRS 316
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 113/296 (38%), Gaps = 20/296 (6%)
Query: 80 LALDIFRWTAQQRSYNHTDLNYLTIIKQ--LNAGRRYQQAETLVEEV--IAGACDGSIPL 135
LAL +W +Q + L I L R Y A +++E+ ++G
Sbjct: 92 LALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGA 151
Query: 136 YNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFN-KLHVCYVYL 194
+ R C ++ VY LR + LE + L+ L FN ++ C L
Sbjct: 152 LMTTYRLCNSNPSVYDILIRVY---LREGMIQDSLEIFRLMG---LYGFNPSVYTCNAIL 205
Query: 195 HAV---------RSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCE 245
+V S K+M + PD N++I +++ + +M G
Sbjct: 206 GSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYA 265
Query: 246 PNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEV 305
P +Y+ + C+KGR + MK K + TY +++ L R +
Sbjct: 266 PTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL 325
Query: 306 LFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
L DM P+ +TY T++ G E + A LL+E +S + + L+D
Sbjct: 326 LRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALID 381
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 125/324 (38%), Gaps = 34/324 (10%)
Query: 62 GFTPSDV--DRALTSVSDPDLALDIFRWTAQQRSYNH--TDLNYLTIIKQLNAGRRYQQA 117
G P+ V D + + L F + H T Y +++K L G ++A
Sbjct: 578 GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA 637
Query: 118 ETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLY 177
E ++ + A +YN+++ C L ++A ++ +M++ PD TYT L
Sbjct: 638 EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNL-AKAVSLFGEMVQ-RSILPDSYTYTSLI 695
Query: 178 NSLLRR--------FNK-------------LHVCYV-------YLHAVRSLTKQMKAVGV 209
+ L R+ F K ++ C+V A +QM +G
Sbjct: 696 SGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGH 755
Query: 210 IPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLG 269
PD N +I YS+ ++++ + EMG PN +Y+ + G ++ V+
Sbjct: 756 TPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFL 815
Query: 270 FYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLC 329
Y+ + + P T +V + E +++L + D T+ ++ C
Sbjct: 816 LYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCC 875
Query: 330 RERRADEAFDLLDECKKRDISMSE 353
+ AFDL+ IS+ +
Sbjct: 876 ANGEINWAFDLVKVMTSLGISLDK 899
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 79/183 (43%), Gaps = 8/183 (4%)
Query: 161 LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMII 220
+ +++ P+L TY +L + +R + V +L L + + G++PD + ++
Sbjct: 785 MGNQNGGPNLTTYNILLHGYSKRKD---VSTSFL-----LYRSIILNGILPDKLTCHSLV 836
Query: 221 KAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLR 280
+ ++ +++ G E + Y+++ + C G +N K M +
Sbjct: 837 LGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGIS 896
Query: 281 PSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDL 340
T +V L + RF+++ VL +M SP+ Y ++ GLCR AF +
Sbjct: 897 LDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVV 956
Query: 341 LDE 343
+E
Sbjct: 957 KEE 959
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 141/323 (43%), Gaps = 39/323 (12%)
Query: 76 SDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPL 135
S P LA F + + + + ++I G R ++A ++V +++ + +
Sbjct: 121 SQPYLA-SSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVM 179
Query: 136 YNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYN------------SLLR- 182
Y +II C + + A ++++M + +PD+ YT L N SLLR
Sbjct: 180 YTTIIDSLCKNGHV-NYALSLFDQM-ENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRG 237
Query: 183 -----------RFNKLHVCYV----YLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCL 227
FN L +V +L A L +M + + P+ F +I + C+
Sbjct: 238 MTKRKIKPDVITFNALIDAFVKEGKFLDA-EELYNEMIRMSIAPNIFTYTSLINGF--CM 294
Query: 228 E--VDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTST 285
E VDEA ++F+ M GC P+ +Y+ + G C+ +V+ + + EM +K L +T T
Sbjct: 295 EGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTIT 354
Query: 286 YVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECK 345
Y ++ + A EV M+ P+ TY +L LC + +A + ++ +
Sbjct: 355 YTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQ 414
Query: 346 KRD---ISMSEKMYKTLLDDLHY 365
KR+ ++ + Y LL L Y
Sbjct: 415 KREMDGVAPNIWTYNVLLHGLCY 437
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 129/302 (42%), Gaps = 50/302 (16%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSII-RFCCGRKFLFSRAFDVYNK 159
Y +++ L R++ A++L+ + + +N++I F KFL A ++YN+
Sbjct: 215 YTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFL--DAEELYNE 272
Query: 160 MLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMI 219
M+R P++ TYT L N + C + R + M+ G PD +
Sbjct: 273 MIRMS-IAPNIFTYTSLINGFC-----MEGC---VDEARQMFYLMETKGCFPDVVAYTSL 323
Query: 220 IKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARG---------------------- 257
I + KC +VD+A+++F+EM G N +Y+ + +G
Sbjct: 324 INGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGV 383
Query: 258 -------------LCEKGRVNQGLGFYKEMKEK---CLRPSTSTYVIIVCSLAMDRRFED 301
LC G+V + L +++M+++ + P+ TY +++ L + + E
Sbjct: 384 PPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEK 443
Query: 302 AIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
A+ V DM +TY +++G+C+ + A +L + + + Y T++
Sbjct: 444 ALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMIS 503
Query: 362 DL 363
L
Sbjct: 504 GL 505
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 104/239 (43%), Gaps = 28/239 (11%)
Query: 150 FSRAFDVYNKMLRSEDCKPDLETYTLLYNSL--LRRFN----------------KLHVCY 191
F+ A D++ M+ S P + +T L N + +++F+ L+ C
Sbjct: 53 FNEALDLFTHMVESRPL-PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 192 VYLHA---------VRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLY 242
+ ++ S +M +G PD +I + ++EA+ + ++M
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 243 GCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDA 302
G +P+ Y+ I LC+ G VN L + +M+ +RP Y +V L R+ DA
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 303 IEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
+L M PD +T+ +++ +E + +A +L +E + I+ + Y +L++
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/154 (18%), Positives = 65/154 (42%)
Query: 210 IPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLG 269
+P ++ +K + D I + + + G + Y+ + + C+ +
Sbjct: 69 LPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASS 128
Query: 270 FYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLC 329
F +M + P T+ ++ + R E+A+ ++ M+ PD + Y T+++ LC
Sbjct: 129 FLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLC 188
Query: 330 RERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+ + A L D+ + I MY +L++ L
Sbjct: 189 KNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 8/176 (4%)
Query: 162 RSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIK 221
R + KP + Y LL S ++ V ++Y K M G+ P T+ N++I+
Sbjct: 104 RFPENKPSVYLYNLLLESCIKERRVEFVSWLY--------KDMVLCGIAPQTYTFNLLIR 155
Query: 222 AYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRP 281
A VD A +F EM GC+PN +++ + RG C+ G ++GL M+ + P
Sbjct: 156 ALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLP 215
Query: 282 STSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEA 337
+ Y IV S + R +D+ +++ M PD +T+ + + LC+E + +A
Sbjct: 216 NKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDA 271
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 19/208 (9%)
Query: 161 LRSEDCKPDLETYTLLYNSLLR--RFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
L +C PDL TY+ L N L + RF + ++L +M + PD+ N+
Sbjct: 515 LIENNCLPDLITYSTLLNGLCKAGRFAE----------AKNLFAEMMGEKLQPDSVAYNI 564
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
I + K ++ A RV +M GC + +Y+ + GL K ++ + G EMKEK
Sbjct: 565 FIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKG 624
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
+ P+ TY + L + EDA +L +M+ + +P+ ++K ++E C+ F
Sbjct: 625 ISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKV----PDF 680
Query: 339 DLLDECKKRDISM---SEKMYKTLLDDL 363
D+ E + +S+ E +Y + ++L
Sbjct: 681 DMAQEVFETAVSICGQKEGLYSLMFNEL 708
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 95/234 (40%), Gaps = 34/234 (14%)
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
K + + P + +Y +L + L + L +++ MK GV PD
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCK--------LGMLSDAKTIVGLMKRNGVCPDAVTYGC 401
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
++ Y +VD A + EM C PNAY+ + + L + GR+++ ++M EK
Sbjct: 402 LLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKG 461
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDM----------LGNSRS------------- 315
T T IIV L + AIE++ M LGNS
Sbjct: 462 YGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCL 521
Query: 316 PDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCRE 369
PD +TY T+L GLC+ R EA +L E + Y +H+ C++
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIF---IHHFCKQ 572
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 108/237 (45%), Gaps = 16/237 (6%)
Query: 132 SIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCY 191
S+ LYN ++ C + + ++ +Y M+ C +TYT +N L+R C
Sbjct: 111 SVYLYNLLLESCIKERRVEFVSW-LYKDMVL---CGIAPQTYT--FNLLIRALCD-SSC- 162
Query: 192 VYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSY 251
+ A R L +M G P+ F ++++ Y K D+ + + + M +G PN Y
Sbjct: 163 --VDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIY 220
Query: 252 SYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDM-- 309
+ I C +GR + ++M+E+ L P T+ + +L + + DA + DM
Sbjct: 221 NTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMEL 280
Query: 310 ---LGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
LG R P+ +TY +L+G C+ ++A L + ++ D S + Y L L
Sbjct: 281 DEYLGLPR-PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGL 336
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 92/195 (47%), Gaps = 6/195 (3%)
Query: 155 DVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTF 214
+++N +L S K L + L S+ + N + + VRS + K P +
Sbjct: 60 ELHNLILSSSIQKTKLSSL-LSVVSIFAKSNHIDKAFPQFQLVRSRFPENK-----PSVY 113
Query: 215 VLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEM 274
+ N+++++ K V+ ++ +M L G P Y+++ + R LC+ V+ + EM
Sbjct: 114 LYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEM 173
Query: 275 KEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRA 334
EK +P+ T+ I+V + +E+L M P+ + Y T++ CRE R
Sbjct: 174 PEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRN 233
Query: 335 DEAFDLLDECKKRDI 349
D++ ++++ ++ +
Sbjct: 234 DDSEKMVEKMREEGL 248
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 8/181 (4%)
Query: 161 LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMII 220
+R D L++Y + L+R H ++ ++ KQM G+ P + N+++
Sbjct: 317 IRENDDLASLQSYNIWLQGLVR-----HGKFI---EAETVLKQMTDKGIGPSIYSYNILM 368
Query: 221 KAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLR 280
K + +A + M G P+A +Y + G C G+V+ +EM
Sbjct: 369 DGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCL 428
Query: 281 PSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDL 340
P+ T I++ SL R +A E+L M D +T +++GLC D+A ++
Sbjct: 429 PNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEI 488
Query: 341 L 341
+
Sbjct: 489 V 489
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 103/248 (41%), Gaps = 14/248 (5%)
Query: 117 AETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLL 176
A L +E+ C + + ++R C + L + ++ N M S P+ Y +
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYC-KAGLTDKGLELLNAM-ESFGVLPNKVIYNTI 223
Query: 177 YNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVF 236
+S R + ++M+ G++PD N I A K +V +A R+F
Sbjct: 224 VSSFCREGRN--------DDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIF 275
Query: 237 HEMGL---YGC-EPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCS 292
+M L G PN+ +Y+ + +G C+ G + ++ ++E S +Y I +
Sbjct: 276 SDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQG 335
Query: 293 LAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMS 352
L +F +A VL M P +Y +++GLC+ +A ++ K+ +
Sbjct: 336 LVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPD 395
Query: 353 EKMYKTLL 360
Y LL
Sbjct: 396 AVTYGCLL 403
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 103/265 (38%), Gaps = 11/265 (4%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
+ Y T++ L R+ +A+ L E++ YN I C ++ S AF V
Sbjct: 525 ITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFC-KQGKISSAFRVLK 583
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
M + C LETY NSL+ + + + L +MK G+ P+ N
Sbjct: 584 DM-EKKGCHKSLETY----NSLILGLGIKNQIF----EIHGLMDEMKEKGISPNICTYNT 634
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
I+ + +V++A + EM PN +S+ Y+ C+ + ++ C
Sbjct: 635 AIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSIC 694
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
+ Y ++ L + A E+L +L YK ++E LC++ + A
Sbjct: 695 GQ-KEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVAS 753
Query: 339 DLLDECKKRDISMSEKMYKTLLDDL 363
+L + R ++D L
Sbjct: 754 GILHKMIDRGYGFDPAALMPVIDGL 778
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 105/232 (45%), Gaps = 14/232 (6%)
Query: 136 YNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLH 195
+N +IR C + A +++++M + CKP+ T+ +L +R + K + L
Sbjct: 150 FNLLIRALCDSSCV-DAARELFDEM-PEKGCKPNEFTFGIL----VRGYCKAGLTDKGLE 203
Query: 196 AVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIA 255
L M++ GV+P+ + N I+ ++ + D++ ++ +M G P+ +++
Sbjct: 204 ----LLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRI 259
Query: 256 RGLCEKGRVNQGLGFYKEMKE----KCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLG 311
LC++G+V + +M+ RP++ TY +++ EDA + +
Sbjct: 260 SALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRE 319
Query: 312 NSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
N +Y L+GL R + EA +L + + I S Y L+D L
Sbjct: 320 NDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGL 371
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 115/251 (45%), Gaps = 10/251 (3%)
Query: 113 RYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLET 172
R+ +A +LV++++ + ++ +YN+II C K + A DV M + +PD+ T
Sbjct: 164 RFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLC-EKGQVNTALDVLKHM-KKMGIRPDVVT 221
Query: 173 YTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEA 232
Y NSL+ R V + R L+ M+ +G+ PD + +I Y K ++ EA
Sbjct: 222 Y----NSLITRLFHSGTWGV---SARILSDMMR-MGISPDVITFSALIDVYGKEGQLLEA 273
Query: 233 IRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCS 292
+ ++EM PN +Y+ + GLC G +++ + K P+ TY ++
Sbjct: 274 KKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLING 333
Query: 293 LAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMS 352
+R +D +++L M + D TY T+ +G C+ + A +L +
Sbjct: 334 YCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPD 393
Query: 353 EKMYKTLLDDL 363
+ LLD L
Sbjct: 394 MYTFNILLDGL 404
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 110/245 (44%), Gaps = 22/245 (8%)
Query: 116 QAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTL 175
+A+ E+I + + +I YNS+I C L A V N +L S+ P+ TY
Sbjct: 272 EAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLL-DEAKKVLN-VLVSKGFFPNAVTYNT 329
Query: 176 LYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAV------GVIPDTFVLNMIIKAYSKCLEV 229
L N Y A R + MK + GV DTF N + + Y + +
Sbjct: 330 LING-------------YCKAKR-VDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKF 375
Query: 230 DEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVII 289
A +V M G P+ Y+++ + GLC+ G++ + L +++++ TY II
Sbjct: 376 SAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNII 435
Query: 290 VCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDI 349
+ L + EDA + + SPD +TY T++ GL R+R EA +L + +K D
Sbjct: 436 IKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDG 495
Query: 350 SMSEK 354
M K
Sbjct: 496 LMPIK 500
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 1/168 (0%)
Query: 196 AVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIA 255
A+ L K MK +G P ++ + EA+ + ++ G EPN Y+ I
Sbjct: 133 ALSCLGKMMK-LGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTII 191
Query: 256 RGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRS 315
LCEKG+VN L K MK+ +RP TY ++ L + + +L DM+ S
Sbjct: 192 DSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGIS 251
Query: 316 PDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
PD +T+ +++ +E + EA +E +R ++ + Y +L++ L
Sbjct: 252 PDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL 299
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 90/207 (43%), Gaps = 9/207 (4%)
Query: 157 YNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVL 216
YN+M++ P++ TY L N L + L + + + + G P+
Sbjct: 277 YNEMIQ-RSVNPNIVTYNSLINGL--------CIHGLLDEAKKVLNVLVSKGFFPNAVTY 327
Query: 217 NMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKE 276
N +I Y K VD+ +++ M G + + ++Y+ + +G C+ G+ + M
Sbjct: 328 NTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVS 387
Query: 277 KCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADE 336
+ P T+ I++ L + A+ L D+ + +TY +++GLC+ + ++
Sbjct: 388 CGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVED 447
Query: 337 AFDLLDECKKRDISMSEKMYKTLLDDL 363
A+ L + +S Y T++ L
Sbjct: 448 AWYLFCSLALKGVSPDVITYITMMIGL 474
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 72/156 (46%)
Query: 210 IPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLG 269
+P + ++ A +K + + I +F + + G + YS++ + C R++ L
Sbjct: 76 LPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALS 135
Query: 270 FYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLC 329
+M + PS T+ +V RF +A+ ++ ++G P+ + Y T+++ LC
Sbjct: 136 CLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLC 195
Query: 330 RERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHY 365
+ + + A D+L KK I Y +L+ L +
Sbjct: 196 EKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFH 231
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 70/166 (42%)
Query: 196 AVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIA 255
AV SL + ++ +G+ D + +I + +C + A+ +M G EP+ ++ +
Sbjct: 97 AVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLV 156
Query: 256 RGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRS 315
G C R + + ++ P+ Y I+ SL + A++VL M
Sbjct: 157 NGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIR 216
Query: 316 PDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
PD +TY +++ L + +L + + IS + L+D
Sbjct: 217 PDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALID 262
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 126/309 (40%), Gaps = 39/309 (12%)
Query: 61 PGFTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETL 120
P +TPS V + DP AL W ++ ++ H +Y +++ L + + +
Sbjct: 23 PFYTPSHVSSLFSLNLDPQTALSFSDWISRIPNFKHNVTSYASLVTLLCSQEIPYEVPKI 82
Query: 121 VEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDV--------YNKMLRS--------- 163
+I L+ ++ FC R +F++ YN +L S
Sbjct: 83 TILMIKSCNSVRDALF--VVDFC--RTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEE 138
Query: 164 ---------ED-CKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDT 213
ED PD+ T +N+L+ + KL Y+ + + G PD
Sbjct: 139 MKRLYTEMLEDLVSPDIYT----FNTLVNGYCKLG----YVVEAKQYVTWLIQAGCDPDY 190
Query: 214 FVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKE 273
F I + + EVD A +VF EM GC N SY+ + GL E ++++ L +
Sbjct: 191 FTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVK 250
Query: 274 MKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERR 333
MK+ P+ TY +++ +L + +A+ + M + PD Y +++ C
Sbjct: 251 MKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDT 310
Query: 334 ADEAFDLLD 342
DEA LL+
Sbjct: 311 LDEASGLLE 319
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 11/226 (4%)
Query: 116 QAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTL 175
+A+ V +I CD Y S I C RK + AF V+ +M ++ C + +YT
Sbjct: 173 EAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEV-DAAFKVFKEMTQN-GCHRNEVSYTQ 230
Query: 176 LYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRV 235
L L + SL +MK P+ ++I A + EA+ +
Sbjct: 231 LIYGLFEAKK--------IDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNL 282
Query: 236 FHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAM 295
F +M G +P+ Y+ + + C +++ G + M E L P+ TY ++
Sbjct: 283 FKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFC- 341
Query: 296 DRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLL 341
+ A+ +L ML + PD +TY T++ G C D A+ LL
Sbjct: 342 KKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLL 387
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 101/241 (41%), Gaps = 19/241 (7%)
Query: 50 KQFETWVNHLKPG-----FTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTI 104
KQ+ TW+ ++ G FT + + D A +F+ Q + + +++Y +
Sbjct: 175 KQYVTWL--IQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRN-EVSYTQL 231
Query: 105 IKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSE 164
I L ++ +A +L+ ++ C ++ Y +I CG S A +++ +M S
Sbjct: 232 IYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSG-QKSEAMNLFKQMSES- 289
Query: 165 DCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYS 224
KPD YT+L S L L + M G++P+ N +IK +
Sbjct: 290 GIKPDDCMYTVLIQSFCSGDT--------LDEASGLLEHMLENGLMPNVITYNALIKGFC 341
Query: 225 KCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTS 284
K V +A+ + +M P+ +Y+ + G C G ++ M+E L P+
Sbjct: 342 K-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQR 400
Query: 285 T 285
T
Sbjct: 401 T 401
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 128/302 (42%), Gaps = 8/302 (2%)
Query: 59 LKPGFTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAE 118
L P V+ L LA F W ++Q Y + Y + L+ R+ +
Sbjct: 67 LSPELNTKVVETVLNGFKRWGLAYLFFNWASKQEGYRNDMYAYNAMASILSRARQNASLK 126
Query: 119 TLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYN 178
LV +V+ C S + IR C G L A V++++ C P+ YT YN
Sbjct: 127 ALVVDVLNSRCFMSPGAFGFFIR-CLGNAGLVDEASSVFDRVREMGLCVPN--AYT--YN 181
Query: 179 SLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHE 238
LL +K + V L V + K+M+ G D F L +++ Y + + A+ VF+E
Sbjct: 182 CLLEAISKSNSSSVEL--VEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNE 239
Query: 239 MGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRR 298
+ G S + + C+ G+V++ + ++E+ +R + TY +++ + R
Sbjct: 240 ILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESR 298
Query: 299 FEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKT 358
+ A ++ M + D Y ++ GLC+ + + A L E K+ I +
Sbjct: 299 IDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGK 358
Query: 359 LL 360
LL
Sbjct: 359 LL 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%)
Query: 200 LTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLC 259
L + + A G PD +++IKA K EA +F+EM G +P +Y+ + G C
Sbjct: 601 LFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWC 660
Query: 260 EKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHL 319
++G +++GL M E P TY ++ L R +AI +M G P+ +
Sbjct: 661 KEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRI 720
Query: 320 TYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMY 356
T+ +++GLC+ + EA E +++++ +Y
Sbjct: 721 TFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 18/191 (9%)
Query: 169 DLETYTLLYNSLLRRFNK---LHVCYVYLH---------AVRSLTKQMK--AVGVIPDTF 214
D ++ LLY SL F + +H Y ++ V + K +K ++PD+
Sbjct: 381 DKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSD 440
Query: 215 VLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEM 274
L+++I K +VD A+ + H++ G P Y+ I G+C++GR + L EM
Sbjct: 441 SLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEM 500
Query: 275 KEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSP--DHLTYKTVLEGLCRER 332
K+ + PS T I LA F A+++L M P H T+ +++ LC
Sbjct: 501 KDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTF--LVKKLCENG 558
Query: 333 RADEAFDLLDE 343
RA +A LD+
Sbjct: 559 RAVDACKYLDD 569
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 107/264 (40%), Gaps = 12/264 (4%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKM 160
Y II+ + R +++ L+ E+ + S N I C + F A D+ KM
Sbjct: 477 YNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYG-CLAERCDFVGALDLLKKM 535
Query: 161 LRSEDCKPDLETYTLLYNSLLRRFNKLHVC-YVYLHAVRSLTKQMKAVGVIPDTFVLNMI 219
R +P ++ T L L + C Y+ A M A D + N
Sbjct: 536 -RFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNE- 593
Query: 220 IKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCL 279
VD + +F ++ G P+ +Y + + LC+ R + + EM K L
Sbjct: 594 --------GVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGL 645
Query: 280 RPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFD 339
+P+ +TY ++ + + + + M + ++PD +TY +++ GLC R EA
Sbjct: 646 KPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIF 705
Query: 340 LLDECKKRDISMSEKMYKTLLDDL 363
+E K +D + + L+ L
Sbjct: 706 RWNEMKGKDCYPNRITFMALIQGL 729
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 27/219 (12%)
Query: 152 RAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIP 211
+AF ++ KM R D+ Y +L L + + L SL ++K G+ P
Sbjct: 301 KAFQLFEKM-RRMGMNADIALYDVLIGGLCKHKD--------LEMALSLYLEIKRSGIPP 351
Query: 212 DTFVLNMIIKAYSKCLEVDEAIRVF-------HEMGLY-----GCEPN-----AYSYSYI 254
D +L ++ ++S+ E+ V M LY G N AYS+
Sbjct: 352 DRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQN 411
Query: 255 ARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSR 314
G E V++ + K+ + L S S ++I C L + + A+ +L D++ N
Sbjct: 412 LMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINC-LVKANKVDMAVTLLHDIVQNGL 470
Query: 315 SPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSE 353
P + Y ++EG+C+E R++E+ LL E K + S+
Sbjct: 471 IPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQ 509
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 88/222 (39%), Gaps = 21/222 (9%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
+ Y +IK L R +A+ L E+++ ++ YNS+I C ++ R
Sbjct: 615 IAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWC-KEGEIDRGLSCIV 673
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
+M E PD+ TYT L + L + + +MK P+
Sbjct: 674 RMYEDEK-NPDVITYTSLIHGLCASGRPSEAIFRW--------NEMKGKDCYPNRITFMA 724
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
+I+ KC EA+ F EM EP++ Y + +N G G ++EM K
Sbjct: 725 LIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKG 784
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLT 320
P +++DR + A+ V + + R+ +LT
Sbjct: 785 RFP-----------VSVDRNYMLAVNVTSKFVEDLRTSCYLT 815
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 123/266 (46%), Gaps = 16/266 (6%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKM 160
Y T+I L +Y++A+ + E++ Y S++ C +K V++ M
Sbjct: 308 YNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEAC-KKGDVVETEKVFSDM 366
Query: 161 LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMII 220
RS D PDL ++ + SL R L +Y ++V K G+IPD + ++I
Sbjct: 367 -RSRDVVPDLVCFSSMM-SLFTRSGNLDKALMYFNSV-------KEAGLIPDNVIYTILI 417
Query: 221 KAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLR 280
+ Y + + A+ + +EM GC + +Y+ I GLC++ + + + EM E+ L
Sbjct: 418 QGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477
Query: 281 PSTSTYVIIV---CSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEA 337
P + T I++ C L ++A+E+ M D +TY T+L+G + D A
Sbjct: 478 PDSYTLTILIDGHCKLG---NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTA 534
Query: 338 FDLLDECKKRDISMSEKMYKTLLDDL 363
++ + ++I + Y L++ L
Sbjct: 535 KEIWADMVSKEILPTPISYSILVNAL 560
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 123/282 (43%), Gaps = 10/282 (3%)
Query: 85 FRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCC 144
F Q++ + Y T+I ++ ++A L+ + + YN++I C
Sbjct: 257 FLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC 316
Query: 145 GRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQM 204
+ + RA +V+ +MLRS PD TY L ++ + + V+ M
Sbjct: 317 -KHGKYERAKEVFAEMLRS-GLSPDSTTYRSLLMEACKKGDVVETEKVF--------SDM 366
Query: 205 KAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRV 264
++ V+PD + ++ +++ +D+A+ F+ + G P+ Y+ + +G C KG +
Sbjct: 367 RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMI 426
Query: 265 NQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTV 324
+ + EM ++ TY I+ L + +A ++ +M + PD T +
Sbjct: 427 SVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTIL 486
Query: 325 LEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYV 366
++G C+ A +L + K++ I + Y TLLD V
Sbjct: 487 IDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKV 528
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 104/253 (41%), Gaps = 11/253 (4%)
Query: 117 AETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLL 176
A L E++ C + YN+I+ C RK L A ++N+M PD T T+L
Sbjct: 429 AMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML-GEADKLFNEMTERA-LFPDSYTLTIL 486
Query: 177 YNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVF 236
+ H L L ++MK + D N ++ + K ++D A ++
Sbjct: 487 IDG--------HCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIW 538
Query: 237 HEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMD 296
+M P SYS + LC KG + + + EM K ++P+ ++
Sbjct: 539 ADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRS 598
Query: 297 RRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMY 356
D L M+ PD ++Y T++ G RE +AF L+ + ++ + ++
Sbjct: 599 GNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVF 658
Query: 357 KTLLDDLHYVCRE 369
T LH CR+
Sbjct: 659 -TYNSILHGFCRQ 670
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 72/144 (50%)
Query: 217 NMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKE 276
N +I + + V+ A V+ E+ G N Y+ + + LC+ G++ + F +++E
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 277 KCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADE 336
K + P TY ++ + + E+A E++ M G SP TY TV+ GLC+ + +
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 337 AFDLLDECKKRDISMSEKMYKTLL 360
A ++ E + +S Y++LL
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLL 347
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 103/251 (41%), Gaps = 47/251 (18%)
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPD 212
A+ VY ++ RS ++ T ++ N+L + + V + Q++ GV PD
Sbjct: 219 AWGVYQEISRS-GVGINVYTLNIMVNALCKDGK--------MEKVGTFLSQVQEKGVYPD 269
Query: 213 TFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
N +I AYS ++EA + + M G P Y+Y+ + GLC+ G+ + +
Sbjct: 270 IVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFA 329
Query: 273 EMKEKCLRPSTSTY------------VIIVCSLAMDRRFEDAIE---------VLFDMLG 311
EM L P ++TY V+ + D R D + LF G
Sbjct: 330 EMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSG 389
Query: 312 N--------------SRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYK 357
N PD++ Y +++G CR+ A +L +E ++ +M Y
Sbjct: 390 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYN 449
Query: 358 TLLDDLHYVCR 368
T+ LH +C+
Sbjct: 450 TI---LHGLCK 457
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 11/204 (5%)
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPD 212
A +++ M+ S++ P +Y++L N+L +K H+ + ++K +K P
Sbjct: 534 AKEIWADMV-SKEILPTPISYSILVNALC---SKGHLAEAFRVWDEMISKNIK-----PT 584
Query: 213 TFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
+ N +IK Y + + +M G P+ SY+ + G + +++ G K
Sbjct: 585 VMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVK 644
Query: 273 EMKEK--CLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
+M+E+ L P TY I+ + ++A VL M+ +PD TY ++ G
Sbjct: 645 KMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVS 704
Query: 331 ERRADEAFDLLDECKKRDISMSEK 354
+ EAF + DE +R S +K
Sbjct: 705 QDNLTEAFRIHDEMLQRGFSPDDK 728
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 85/190 (44%), Gaps = 8/190 (4%)
Query: 160 MLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMI 219
+LRS+ ++ L SL+R + +V L + +++ GV + + LN++
Sbjct: 190 LLRSKGFTVSIDACNALIGSLVR------IGWVEL--AWGVYQEISRSGVGINVYTLNIM 241
Query: 220 IKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCL 279
+ A K ++++ ++ G P+ +Y+ + KG + + M K
Sbjct: 242 VNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGF 301
Query: 280 RPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFD 339
P TY ++ L ++E A EV +ML + SPD TY+++L C++ E
Sbjct: 302 SPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEK 361
Query: 340 LLDECKKRDI 349
+ + + RD+
Sbjct: 362 VFSDMRSRDV 371
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 86/184 (46%), Gaps = 12/184 (6%)
Query: 136 YNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLH 195
Y+ ++ C + L + AF V+++M+ S++ KP + ++ NS+++ + +
Sbjct: 553 YSILVNALCSKGHL-AEAFRVWDEMI-SKNIKPTV----MICNSMIKGYCRSGNA----S 602
Query: 196 AVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMG--LYGCEPNAYSYSY 253
S ++M + G +PD N +I + + + +A + +M G P+ ++Y+
Sbjct: 603 DGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNS 662
Query: 254 IARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNS 313
I G C + ++ + ++M E+ + P STY ++ +A + +ML
Sbjct: 663 ILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Query: 314 RSPD 317
SPD
Sbjct: 723 FSPD 726
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 110/273 (40%), Gaps = 49/273 (17%)
Query: 130 DGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHV 189
D + +++SI+R C + L A + KM+ S P L T+ L N L +
Sbjct: 118 DDCLSIHSSIMRDLCLQGKL-DAALWLRKKMIYS-GVIPGLITHNHLLNGLCKAG----- 170
Query: 190 CYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAY 249
Y+ L ++M+ +G P+ N +IK VD+A+ +F+ M YG PN
Sbjct: 171 ---YIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRV 227
Query: 250 SYSYIARGLCEKG---------------------------------------RVNQGLGF 270
+ + I LC+KG V Q L
Sbjct: 228 TCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEV 287
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
+KEM +K + + Y +I+ L A + DM+ +PD TY T++ LC+
Sbjct: 288 WKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCK 347
Query: 331 ERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
E + DEA DL + ++ + YK ++ L
Sbjct: 348 EGKFDEACDLHGTMQNGGVAPDQISYKVIIQGL 380
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 120/271 (44%), Gaps = 11/271 (4%)
Query: 81 ALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSII 140
AL++++ Q++ + Y II+ L + A + +++ + + YN++I
Sbjct: 284 ALEVWK-EMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLI 342
Query: 141 RFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSL 200
C ++ F A D++ M ++ PD +Y ++ L + ++
Sbjct: 343 SALC-KEGKFDEACDLHGTM-QNGGVAPDQISYKVIIQGLCIHGD--------VNRANEF 392
Query: 201 TKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCE 260
M ++P+ + N++I Y + + A+ V + M YG +PN Y+ + + G +
Sbjct: 393 LLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVK 452
Query: 261 KGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLT 320
GR+ EM+ + P T+TY +++ + A ++ +ML PD +T
Sbjct: 453 GGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIIT 512
Query: 321 YKTVLEGLCRERRADEAFDLLDECKKRDISM 351
Y ++ GLC + R +A LL + I++
Sbjct: 513 YTELVRGLCWKGRLKKAESLLSRIQATGITI 543
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 66/128 (51%), Gaps = 3/128 (2%)
Query: 212 DTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFY 271
D + +++ + K V +A+ V+ EM ++ Y+ I RGLC G + GF
Sbjct: 264 DIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFM 323
Query: 272 KEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRE 331
+M ++ + P TY ++ +L + +F++A ++ M +PD ++YK +++GLC
Sbjct: 324 CDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIH 383
Query: 332 ---RRADE 336
RA+E
Sbjct: 384 GDVNRANE 391
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 116/295 (39%), Gaps = 15/295 (5%)
Query: 70 RALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQL-NAGRRYQQAETLVEEVIAGA 128
+ L SV++ D AL +F T + + I+ L G + L+EE++ +
Sbjct: 199 KGLCSVNNVDKALYLFN-TMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSS 257
Query: 129 CDGSIPL---YNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFN 185
+ PL +I+ C + +A +V+ +M ++ D Y ++ L N
Sbjct: 258 -QANAPLDIVICTILMDSCFKNGNVVQALEVWKEM-SQKNVPADSVVYNVIIRGLCSSGN 315
Query: 186 KLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCE 245
+ A M GV PD F N +I A K + DEA + M G
Sbjct: 316 MV--------AAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVA 367
Query: 246 PNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEV 305
P+ SY I +GLC G VN+ F M + L P + +++ A+ V
Sbjct: 368 PDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSV 427
Query: 306 LFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
L ML P+ T ++ G + R +A+ + +E + I Y LL
Sbjct: 428 LNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLL 482
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 119/264 (45%), Gaps = 12/264 (4%)
Query: 78 PDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYN 137
P+LA+++ + + Y T++ + A + E++ A C + YN
Sbjct: 278 PNLAVELLD-MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYN 336
Query: 138 SIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAV 197
++I GR L + A ++ + L + PD TY L + R N V VY
Sbjct: 337 AMIS-VYGRCGLAAEAERLFME-LELKGFFPDAVTYNSLLYAFARERNTEKVKEVY---- 390
Query: 198 RSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEM-GLYGCEPNAYSYSYIAR 256
+QM+ +G D N II Y K ++D A++++ +M GL G P+A +Y+ +
Sbjct: 391 ----QQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLID 446
Query: 257 GLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSP 316
L + R + EM + ++P+ TY ++C A + E+A + ML + P
Sbjct: 447 SLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKP 506
Query: 317 DHLTYKTVLEGLCRERRADEAFDL 340
D+L Y +L+ L R +A+ L
Sbjct: 507 DNLAYSVMLDVLLRGNETRKAWGL 530
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 133/312 (42%), Gaps = 18/312 (5%)
Query: 63 FTPSDVDRALTSVSDPDL--ALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETL 120
TP+D + SV AL++F W R ++ + + I L R+ Q E+L
Sbjct: 154 MTPTDYCFVVKSVGQESWQRALEVFEWL-NLRHWHSPNARMVAAI--LGVLGRWNQ-ESL 209
Query: 121 VEEVIAGA---CDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLY 177
E+ A + +YN+++ R FS+A ++ + M R C PDL ++ L
Sbjct: 210 AVEIFTRAEPTVGDRVQVYNAMMG-VYSRSGKFSKAQELVDAM-RQRGCVPDLISFNTLI 267
Query: 178 NSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFH 237
N+ L+ V L ++ G+ PD N ++ A S+ +D A++VF
Sbjct: 268 NARLKSGGLTPNLAV------ELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFE 321
Query: 238 EMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDR 297
+M + C+P+ ++Y+ + G + + E++ K P TY ++ + A +R
Sbjct: 322 DMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARER 381
Query: 298 RFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKM-Y 356
E EV M D +TY T++ ++ + D A L + K + + Y
Sbjct: 382 NTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITY 441
Query: 357 KTLLDDLHYVCR 368
L+D L R
Sbjct: 442 TVLIDSLGKANR 453
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/289 (20%), Positives = 118/289 (40%), Gaps = 33/289 (11%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRF--CCGRKFLFSRAFDVYN 158
Y II+ + +Q+AE++V + + +NS++ CG + RA ++N
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCG---CYERARAIFN 811
Query: 159 KMLRSEDCKPDLETYTLLYNSLL--RRFNKLHVCYVYLH--------------------- 195
M+R + P +E+ +L ++L R +L+V L
Sbjct: 812 TMMR-DGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARA 870
Query: 196 ----AVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSY 251
V+ + MKA G +P + M+I+ K V +A + EM + +
Sbjct: 871 GNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIW 930
Query: 252 SYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLG 311
+ + + + + Y+ +KE L P +TY ++ DRR E+ ++ M
Sbjct: 931 NSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRN 990
Query: 312 NSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
P TYK+++ +++ ++A L +E + + + Y T++
Sbjct: 991 LGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMM 1039
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/263 (18%), Positives = 109/263 (41%), Gaps = 15/263 (5%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKM 160
Y T++ A Y +A + ++ C+ S + S++ C F A V N+
Sbjct: 684 YETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFP-ETAHQVVNQA 742
Query: 161 LRSE---DCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLN 217
C P +Y ++ + K + S+ ++ G PD N
Sbjct: 743 ETKGFHFACSP-------MYTDIIEAYGKQKLW----QKAESVVGNLRQSGRTPDLKTWN 791
Query: 218 MIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEK 277
++ AY++C + A +F+ M G P S + + LC GR+ + +E+++
Sbjct: 792 SLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDM 851
Query: 278 CLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEA 337
+ S S+ ++++ + A + ++ M P Y+ ++E LC+ +R +A
Sbjct: 852 GFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDA 911
Query: 338 FDLLDECKKRDISMSEKMYKTLL 360
++ E ++ + + ++ ++L
Sbjct: 912 EIMVSEMEEANFKVELAIWNSML 934
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/256 (19%), Positives = 114/256 (44%), Gaps = 10/256 (3%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKM 160
Y +I+ L G+R + AE +V E+ + ++NS+++ + + + VY +
Sbjct: 895 YRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIED-YKKTVQVYQR- 952
Query: 161 LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMII 220
++ +PD TY L + R + Y+ L +QM+ +G+ P +I
Sbjct: 953 IKETGLEPDETTYNTLI-IMYCRDRRPEEGYL-------LMQQMRNLGLDPKLDTYKSLI 1004
Query: 221 KAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLR 280
A+ K +++A ++F E+ G + + Y + + + G ++ + MK +
Sbjct: 1005 SAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIE 1064
Query: 281 PSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDL 340
P+ +T +++ S + ++A +VL ++ L Y +V++ R + + +
Sbjct: 1065 PTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIER 1124
Query: 341 LDECKKRDISMSEKMY 356
L E KK + +++
Sbjct: 1125 LLEMKKEGLEPDHRIW 1140
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 134/319 (42%), Gaps = 21/319 (6%)
Query: 53 ETWVNHLKPGFTPSDVDRALTSVS-----DPDLALDIFRWTAQQRSYNHTDLNYLTIIKQ 107
E W ++ G +P + A V DLA ++ + + + Y +I
Sbjct: 170 EIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISG 229
Query: 108 LNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCK 167
R ++AE L + C+ + YN ++ + L RA V +M+RS
Sbjct: 230 FCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNML-KRAEGVMAEMVRS---G 285
Query: 168 PDLETYTLLYNSLLRRFNKLH---VCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYS 224
L+ Y+ YN LL+R ++ CY ++ K+M+ G D + +I+ +
Sbjct: 286 IQLDAYS--YNQLLKRHCRVSHPDKCYNFM------VKEMEPRGFC-DVVSYSTLIETFC 336
Query: 225 KCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTS 284
+ +A R+F EM G N +Y+ + + +G + +M E L P
Sbjct: 337 RASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRI 396
Query: 285 TYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDEC 344
Y I+ L + A V DM+ + +PD ++Y +++ GLCR R EA L ++
Sbjct: 397 FYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDM 456
Query: 345 KKRDISMSEKMYKTLLDDL 363
K ++ E +K ++ L
Sbjct: 457 KGKECCPDELTFKFIIGGL 475
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 12/203 (5%)
Query: 127 GACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNK 186
G CD + Y+++I C R +A+ ++ +M R + ++ TYT L + LR N
Sbjct: 321 GFCD--VVSYSTLIETFC-RASNTRKAYRLFEEM-RQKGMVMNVVTYTSLIKAFLREGNS 376
Query: 187 LHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEP 246
+ L QM +G+ PD I+ K VD+A VF++M + P
Sbjct: 377 --------SVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITP 428
Query: 247 NAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVL 306
+A SY+ + GLC GRV + + +++MK K P T+ I+ L ++ A +V
Sbjct: 429 DAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVW 488
Query: 307 FDMLGNSRSPDHLTYKTVLEGLC 329
M+ + D T+++ C
Sbjct: 489 DQMMDKGFTLDRDVSDTLIKASC 511
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 66/142 (46%), Gaps = 1/142 (0%)
Query: 197 VRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIAR 256
+ +L M+ +G IPD + N+ + + +V A++ F M G EP+ SY+ +
Sbjct: 98 IDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILIN 157
Query: 257 GLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSP 316
GL G+V + + M + P +V L R+ + A E++ + + ++R
Sbjct: 158 GLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVK 217
Query: 317 -DHLTYKTVLEGLCRERRADEA 337
+ Y ++ G C+ R ++A
Sbjct: 218 LSTVVYNALISGFCKAGRIEKA 239
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 73/158 (46%), Gaps = 1/158 (0%)
Query: 204 MKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGR 263
MK +G F + I K + D + +M G P+ ++++ LC + +
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 264 VNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKT 323
V + + M ++ P +Y I++ L + DA+E+ M+ + SPD+
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189
Query: 324 VLEGLCRERRADEAFDLL-DECKKRDISMSEKMYKTLL 360
++ GLC R+ D A++++ +E K + +S +Y L+
Sbjct: 190 LVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALI 227
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 74/140 (52%)
Query: 209 VIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGL 268
+ P T N +I + K VD+A R+ M GC P+ ++S + G C+ RV+ G+
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 269 GFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGL 328
+ EM + + +T TY ++ + A ++L +M+ +PD++T+ +L GL
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 329 CRERRADEAFDLLDECKKRD 348
C ++ +AF +L++ +K +
Sbjct: 126 CSKKELRKAFAILEDLQKSE 145
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 10/173 (5%)
Query: 196 AVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDE-----AIRVFHEMGLYGCEPNAYS 250
AV S + MK PD F N+I++ + +E A V++EM C PN Y+
Sbjct: 146 AVESFGR-MKEFDCRPDVFTYNVILRVMMR----EEVFFMLAFAVYNEMLKCNCSPNLYT 200
Query: 251 YSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDML 310
+ + GL +KGR + + +M + + P+ TY I++ L +DA ++ ++M
Sbjct: 201 FGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQ 260
Query: 311 GNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+ PD + + +L+G C+ R EAF+LL +K + + Y +L+D L
Sbjct: 261 TSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGL 313
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 106/260 (40%), Gaps = 51/260 (19%)
Query: 129 CDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLH 188
C + YN I+R + F AF VYN+ML+ +C P+L T+ +L + L ++
Sbjct: 158 CRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKC-NCSPNLYTFGILMDGLYKKGRT-- 214
Query: 189 VCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNA 248
+ + M G+ P+ ++I + D+A ++F+EM G P++
Sbjct: 215 ------SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDS 268
Query: 249 YSYSYIARGLCEKGRV-----------------------------------NQGLGFYKE 273
+++ + G C+ GR+ Q Y
Sbjct: 269 VAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYAN 328
Query: 274 MKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERR 333
M +K ++P Y I++ L+ + EDA+++L M SPD Y V++ LC
Sbjct: 329 MLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGR-- 386
Query: 334 ADEAFDLLDECKKRDISMSE 353
LL+E + + MSE
Sbjct: 387 -----GLLEEGRSLQLEMSE 401
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 110/264 (41%), Gaps = 58/264 (21%)
Query: 150 FSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGV 209
+++AF++Y ML+ ++ KPD+ YT+L L + + L M + G+
Sbjct: 319 YTQAFELYANMLK-KNIKPDIILYTILIQGLSKAGK--------IEDALKLLSSMPSKGI 369
Query: 210 IPDTFVLNMIIKAY---------------------------------SKCLE--VDEAIR 234
PDT+ N +IKA S C V EA
Sbjct: 370 SPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEE 429
Query: 235 VFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLA 294
+F E+ GC P+ +++ + GLC+ G + + +M+ RP++ + + S +
Sbjct: 430 IFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVG--RPAS---LFLRLSHS 484
Query: 295 MDRRFEDAIEV---------LFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECK 345
+R F+ +E L SPD ++Y ++ G CR D A LL+ +
Sbjct: 485 GNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQ 544
Query: 346 KRDISMSEKMYKTLLDDLHYVCRE 369
+ +S Y TL++ LH V RE
Sbjct: 545 LKGLSPDSVTYNTLINGLHRVGRE 568
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 96/212 (45%), Gaps = 8/212 (3%)
Query: 152 RAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIP 211
+A + + +M + DC+PD+ TY N +LR + V ++ AV + +M P
Sbjct: 145 KAVESFGRM-KEFDCRPDVFTY----NVILRVMMREEVFFMLAFAVYN---EMLKCNCSP 196
Query: 212 DTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFY 271
+ + +++ K +A ++F +M G PN +Y+ + GLC++G + +
Sbjct: 197 NLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLF 256
Query: 272 KEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRE 331
EM+ P + + ++ R +A E+L + Y ++++GL R
Sbjct: 257 YEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRA 316
Query: 332 RRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
RR +AF+L K++I +Y L+ L
Sbjct: 317 RRYTQAFELYANMLKKNIKPDIILYTILIQGL 348
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 163 SEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKA 222
+ DCKPD+ TY +L N L + K + G+IP+ +I+A
Sbjct: 338 ANDCKPDVATYNILINRLCKEGKK--------EVAVGFLDEASKKGLIPNNLSYAPLIQA 389
Query: 223 YSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPS 282
Y K E D A ++ +M GC+P+ +Y + GL G ++ + ++ ++ + P
Sbjct: 390 YCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPD 449
Query: 283 TSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEA 337
+ Y +++ L RF A + +ML + PD Y T+++G R DEA
Sbjct: 450 AAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEA 504
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 119/267 (44%), Gaps = 14/267 (5%)
Query: 100 NYLT--IIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVY 157
NY T ++K + + + L+E C +I YN+II C + A+ V+
Sbjct: 205 NYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYC-KLGDIENAYLVF 263
Query: 158 NKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLN 217
K L+ + P LET+ + N + + + A L ++K G+ + LN
Sbjct: 264 -KELKLKGFMPTLETFGTMINGFCKEGDFV--------ASDRLLSEVKERGLRVSVWFLN 314
Query: 218 MIIKA-YSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKE 276
II A Y +VD A + + C+P+ +Y+ + LC++G+ +GF E +
Sbjct: 315 NIIDAKYRHGYKVDPAESIGWIIA-NDCKPDVATYNILINRLCKEGKKEVAVGFLDEASK 373
Query: 277 KCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADE 336
K L P+ +Y ++ + + ++ A ++L M PD +TY ++ GL D+
Sbjct: 374 KGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDD 433
Query: 337 AFDLLDECKKRDISMSEKMYKTLLDDL 363
A ++ + R +S +Y L+ L
Sbjct: 434 AVNMKVKLIDRGVSPDAAIYNMLMSGL 460
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 111/278 (39%), Gaps = 16/278 (5%)
Query: 89 AQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKF 148
A ++ +L+Y +I+ + Y A L+ ++ C I Y +I
Sbjct: 371 ASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIH-----GL 425
Query: 149 LFSRAFDVYNKM---LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMK 205
+ S D M L PD Y +L + L + L + L +M
Sbjct: 426 VVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFL--------PAKLLFSEML 477
Query: 206 AVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVN 265
++PD +V +I + + + DEA +VF G + + ++ + +G C G ++
Sbjct: 478 DRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLD 537
Query: 266 QGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVL 325
+ L M E+ L P TY I+ + AI++ M N P+ +TY +++
Sbjct: 538 EALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLI 597
Query: 326 EGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
G C + A + E + RD+ + Y TL+ L
Sbjct: 598 NGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSL 635
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 6/185 (3%)
Query: 148 FLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAV 207
F+ S FD K+ S + ++ + +N++++ F + + L + +M
Sbjct: 495 FIRSGDFDEARKVF-SLSVEKGVKVDVVHHNAMIKGFCRSGM----LDEALACMNRMNEE 549
Query: 208 GVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQG 267
++PD F + II Y K ++ AI++F M C+PN +Y+ + G C +G
Sbjct: 550 HLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMA 609
Query: 268 LGFYKEMKEKCLRPSTSTYVIIVCSLAMDRR-FEDAIEVLFDMLGNSRSPDHLTYKTVLE 326
+KEM+ + L P+ TY ++ SLA + E A+ M+ N P+ +T+ +L+
Sbjct: 610 EETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQ 669
Query: 327 GLCRE 331
G ++
Sbjct: 670 GFVKK 674
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%)
Query: 210 IPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLG 269
+PD N ++ K + +A +V+ EM G + YS + +G+C +G+V G
Sbjct: 167 VPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRK 226
Query: 270 FYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLC 329
+ K P+ Y I+ E+A V ++ P T+ T++ G C
Sbjct: 227 LIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFC 286
Query: 330 RERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
+E + LL E K+R + +S ++D
Sbjct: 287 KEGDFVASDRLLSEVKERGLRVSVWFLNNIID 318
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 91/180 (50%), Gaps = 14/180 (7%)
Query: 115 QQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFS--RAFDVYNKMLRSEDCKPDLET 172
+ A L E++ + S P+YNS+I G + L + A D+Y KML+ + + DL T
Sbjct: 671 ESASALFSELLEEGLNPSQPIYNSLI---SGFRNLGNMVAALDLYKKMLK-DGLRCDLGT 726
Query: 173 YTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEA 232
YT L + LL+ N + +Y +M+AVG++PD + +I+ SK + +
Sbjct: 727 YTTLIDGLLKDGNLILASELY--------TEMQAVGLVPDEIIYTVIVNGLSKKGQFVKV 778
Query: 233 IRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCS 292
+++F EM PN Y+ + G +G +++ + EM +K + P +T+ I+V
Sbjct: 779 VKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 120/260 (46%), Gaps = 12/260 (4%)
Query: 103 TIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLR 162
TII+ G+++++A L +E ++ + N+I+ + C ++ A ++ +KM
Sbjct: 414 TIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLC-KQGKTDEATELLSKM-E 470
Query: 163 SEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKA 222
S P++ +Y + R+ N + R + + G+ P+ + +++I
Sbjct: 471 SRGIGPNVVSYNNVMLGHCRQKN--------MDLARIVFSNILEKGLKPNNYTYSILIDG 522
Query: 223 YSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEM-KEKCLRP 281
+ + A+ V + M E N Y I GLC+ G+ ++ M +EK L
Sbjct: 523 CFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCV 582
Query: 282 STSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLL 341
S +Y I+ + + A+ +M GN SP+ +TY +++ GLC+ R D+A ++
Sbjct: 583 SCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMR 642
Query: 342 DECKKRDISMSEKMYKTLLD 361
DE K + + + Y L+D
Sbjct: 643 DEMKNKGVKLDIPAYGALID 662
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 109/251 (43%), Gaps = 10/251 (3%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
++Y +II A EE+ ++ Y S++ C + +A ++ +
Sbjct: 585 MSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLC-KNNRMDQALEMRD 643
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
+M +++ K D+ Y L + +R N + + +L ++ G+ P + N
Sbjct: 644 EM-KNKGVKLDIPAYGALIDGFCKRSN--------MESASALFSELLEEGLNPSQPIYNS 694
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
+I + + A+ ++ +M G + +Y+ + GL + G + Y EM+
Sbjct: 695 LISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVG 754
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
L P Y +IV L+ +F +++ +M N+ +P+ L Y V+ G RE DEAF
Sbjct: 755 LVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAF 814
Query: 339 DLLDECKKRDI 349
L DE + I
Sbjct: 815 RLHDEMLDKGI 825
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 116/292 (39%), Gaps = 36/292 (12%)
Query: 103 TIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLR 162
TI+ L + +A L+ ++ + ++ YN+++ C +K + A V++ +L
Sbjct: 448 TILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNM-DLARIVFSNILE 506
Query: 163 SEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFV------- 215
+ KP+ TY++L + R ++ + V H S ++ GV+ T +
Sbjct: 507 -KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSS---NIEVNGVVYQTIINGLCKVG 562
Query: 216 ------------------------LNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSY 251
N II + K E+D A+ + EM G PN +Y
Sbjct: 563 QTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITY 622
Query: 252 SYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLG 311
+ + GLC+ R++Q L EMK K ++ Y ++ E A + ++L
Sbjct: 623 TSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLE 682
Query: 312 NSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+P Y +++ G A DL + K + Y TL+D L
Sbjct: 683 EGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGL 734
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 122/262 (46%), Gaps = 15/262 (5%)
Query: 102 LTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKML 161
L +KQ N A L +E+++ ++ S+I C L S A +++KM
Sbjct: 312 LASVKQGN----MDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVS-ALVLFDKM- 365
Query: 162 RSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIK 221
E P+ T+++L R+ ++ + K+M+ +G+ P F ++ II+
Sbjct: 366 EKEGPSPNSVTFSVLI-EWFRKNGEMEKALEFY-------KKMEVLGLTPSVFHVHTIIQ 417
Query: 222 AYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRP 281
+ K + +EA+++F E G N + + I LC++G+ ++ +M+ + + P
Sbjct: 418 GWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGP 476
Query: 282 STSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLL 341
+ +Y ++ + + A V ++L P++ TY +++G R A +++
Sbjct: 477 NVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVV 536
Query: 342 DECKKRDISMSEKMYKTLLDDL 363
+ +I ++ +Y+T+++ L
Sbjct: 537 NHMTSSNIEVNGVVYQTIINGL 558
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 133/320 (41%), Gaps = 35/320 (10%)
Query: 66 SDVDRALTSVSDPDLALDIFRWTAQQR-SYNHTDLNYLTIIKQLNAGRRYQQAETLVEEV 124
S +D L ++P+ AL + W R S+ D+ ++ I +++ Y +A L+
Sbjct: 74 SVIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVSSPETYGRASDLLIRY 133
Query: 125 IAGACDGSIPLYNSIIR--FCCGRKFLF---SRAF-----------------DVYNKMLR 162
++ P+ + ++ + F F SRAF D+ N+ML
Sbjct: 134 VS--TSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLE 191
Query: 163 SEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKA 222
D P ++L++R + L + L +M A+GV D ++++A
Sbjct: 192 L-DVIPFFPYVNRTLSALVQRNS--------LTEAKELYSRMVAIGVDGDNVTTQLLMRA 242
Query: 223 YSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCL-RP 281
+ + EA+ V G EP++ YS + C+ + +EMKEK L P
Sbjct: 243 SLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVP 302
Query: 282 STSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLL 341
S TY ++ + +DAI + +ML + S + + +++ G C+ A L
Sbjct: 303 SQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLF 362
Query: 342 DECKKRDISMSEKMYKTLLD 361
D+ +K S + + L++
Sbjct: 363 DKMEKEGPSPNSVTFSVLIE 382
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 15/232 (6%)
Query: 136 YNSIIR--FCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVY 193
YNSII F G A Y +M P++ TYT L N L + N++
Sbjct: 587 YNSIIDGFFKEGE---MDSAVAAYEEMC-GNGISPNVITYTSLMNGLCKN-NRMDQAL-- 639
Query: 194 LHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSY 253
+ +MK GV D +I + K ++ A +F E+ G P+ Y+
Sbjct: 640 -----EMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNS 694
Query: 254 IARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNS 313
+ G G + L YK+M + LR TY ++ L D A E+ +M
Sbjct: 695 LISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVG 754
Query: 314 RSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHY 365
PD + Y ++ GL ++ + + + +E KK +++ + +Y ++ HY
Sbjct: 755 LVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAG-HY 805
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 99/229 (43%), Gaps = 11/229 (4%)
Query: 116 QAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTL 175
+A+ L ++A DG ++R R+ + A +V ++ + +PD Y+L
Sbjct: 216 EAKELYSRMVAIGVDGDNVTTQLLMRASL-REEKPAEALEVLSRAIE-RGAEPDSLLYSL 273
Query: 176 LYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGV-IPDTFVLNMIIKAYSKCLEVDEAIR 234
+ + + L SL ++MK + +P +I A K +D+AIR
Sbjct: 274 AVQACCKTLD--------LAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIR 325
Query: 235 VFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLA 294
+ EM G N + + + G C+ + L + +M+++ P++ T+ +++
Sbjct: 326 LKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFR 385
Query: 295 MDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDE 343
+ E A+E M +P T+++G + ++ +EA L DE
Sbjct: 386 KNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDE 434
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 132/306 (43%), Gaps = 33/306 (10%)
Query: 78 PDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYN 137
P L+ F WT S H+ + +I L + ++ A L++++ S PL
Sbjct: 60 PSLSWSFFIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSS-PL-- 116
Query: 138 SIIRFCCGR--------KFLFSRAFDVYNK------------MLRSEDCKPDLETYTLLY 177
++R G +FS Y K +RS KP L+ T+L
Sbjct: 117 -VLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLL 175
Query: 178 NSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFH 237
NSL+++ V + K+M +GV+ + V N+++ A SK + ++A ++
Sbjct: 176 NSLVKQ--------RLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLS 227
Query: 238 EMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDR 297
EM G P+ ++Y+ + C+K + L M+ + P+ TY + + +
Sbjct: 228 EMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREG 287
Query: 298 RFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYK 357
R +A LF + + + +H+TY T+++G CR DEA L + + R S Y
Sbjct: 288 RMREATR-LFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYN 346
Query: 358 TLLDDL 363
++L L
Sbjct: 347 SILRKL 352
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 115/283 (40%), Gaps = 50/283 (17%)
Query: 115 QQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYT 174
++AE L+ E+ I YN++I C + F A V ++M RS P++ TY
Sbjct: 220 EKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHF-EALSVQDRMERS-GVAPNIVTY- 276
Query: 175 LLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAV--GVIPDTFVLNMIIKAYSKCLEVDEA 232
NS + F++ +R T+ + + V + +I Y + ++DEA
Sbjct: 277 ---NSFIHGFSREG-------RMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEA 326
Query: 233 IRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTST------- 285
+R+ M G P +Y+ I R LCE GR+ + EM K + P T
Sbjct: 327 LRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINA 386
Query: 286 --------------YVIIVCSLAMDR--------------RFEDAIEVLFDMLGNSRSPD 317
+I L +D E+A E LF M+ SP
Sbjct: 387 YCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPG 446
Query: 318 HLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
+ TY +++G + + DE LL+E +KR + +Y+ L+
Sbjct: 447 YATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLI 489
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 13/215 (6%)
Query: 149 LFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVG 208
+ ++A VY M+ P + T+ + +S + + V ++L +MK
Sbjct: 218 MMNKASAVYETMI-EHGIMPTVITFNTMLDSCFKAGDLERVDKIWL--------EMKRRN 268
Query: 209 VIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGL 268
+ N++I +SK +++EA R +M G YS++ + G C++G +
Sbjct: 269 IEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAW 328
Query: 269 GFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGL 328
G EM + P+TSTY I +C+L R +DA E+L M +PD ++Y T++ G
Sbjct: 329 GVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGY 384
Query: 329 CRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+ + EA L D+ + DI S Y TL+D L
Sbjct: 385 IKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGL 419
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 127/322 (39%), Gaps = 48/322 (14%)
Query: 67 DVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIA 126
D L+S++ PD+ SYN Y+ + K + +A L +++ A
Sbjct: 361 DARELLSSMAAPDVV-----------SYNTLMHGYIKMGK-------FVEASLLFDDLRA 402
Query: 127 GACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNK 186
G SI YN++I C L + + ++ PD+ TYT L ++ N
Sbjct: 403 GDIHPSIVTYNTLIDGLCESGNL--EGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNL 460
Query: 187 LHVCYVYLHAVRSLTK------QMKAVGVI----------------------PDTFVLNM 218
VY +R K +AVG + PD + N+
Sbjct: 461 SMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNV 520
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
I K + +AI ++ G P+ +Y+ + RG E G+ Y EM K
Sbjct: 521 RIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKR 580
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
L PS TY +++ A R E A + +M P+ +T+ +L G+C+ DEA+
Sbjct: 581 LYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAY 640
Query: 339 DLLDECKKRDISMSEKMYKTLL 360
L + ++ I ++ Y L+
Sbjct: 641 RYLCKMEEEGIPPNKYSYTMLI 662
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 96/213 (45%), Gaps = 27/213 (12%)
Query: 152 RAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKL-----------------HVCYV-- 192
+AF ++ +M+ ++ PDL Y + + L + N + HV Y
Sbjct: 497 KAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTV 556
Query: 193 ---YLH-----AVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGC 244
YL R+L +M + P ++I ++K +++A + EM G
Sbjct: 557 IRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGV 616
Query: 245 EPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIE 304
PN +++ + G+C+ G +++ + +M+E+ + P+ +Y +++ ++E+ ++
Sbjct: 617 RPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVK 676
Query: 305 VLFDMLGNSRSPDHLTYKTVLEGLCRERRADEA 337
+ +ML PD T++ + + L ++ + E
Sbjct: 677 LYKEMLDKEIEPDGYTHRALFKHLEKDHESREV 709
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 131/314 (41%), Gaps = 42/314 (13%)
Query: 86 RWTAQQR--------SYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYN 137
RW+ QR N L + +I + +AE L +E++ YN
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405
Query: 138 SII-RFCCGRKF----------------LFSRAFDVYNKMLRSED--------CKPDLET 172
S+I FC +F F+ DVY + R ++ + L
Sbjct: 406 SMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465
Query: 173 YTLLYNSLLRRFNKLHVCYV-YLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDE 231
T YN+L+ F C V L+A + L ++M + GV PDT N+++ + + +++E
Sbjct: 466 NTTTYNTLIHGF-----CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Query: 232 AIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVC 291
A+ +F + + + + +Y+ I G+C+ +V++ + + + P TY +++
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Query: 292 SLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDIS- 350
DA + M N PD+ TY T++ G + D++ +L+ E + S
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSG 640
Query: 351 --MSEKMYKTLLDD 362
+ KM L+ D
Sbjct: 641 DAFTIKMVADLITD 654
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 130/293 (44%), Gaps = 18/293 (6%)
Query: 79 DLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNS 138
D A+D F + + R + +T ++ +I R A +L ++ +I +N
Sbjct: 88 DDAIDFFDYMVRSRPF-YTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 139 IIR-FCCGRKFLFSRAFDVYNKMLRSEDCKPDLETY-TLLYNSLLR-RFNKLHVCYVY-- 193
+I+ FC K FS + K+ + +PD+ T+ TLL+ L R ++ + Y
Sbjct: 147 LIKCFCDCHKLSFS--LSTFGKLTKL-GFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 194 ----LHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLE--VDEAIRVFHEMGLYGCEPN 247
L AV +L QM +G+ P N +I CLE V EA + ++M G +
Sbjct: 204 ETGFLEAV-ALFDQMVEIGLTPVVITFNTLINGL--CLEGRVLEAAALVNKMVGKGLHID 260
Query: 248 AYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLF 307
+Y I G+C+ G L +M+E ++P Y I+ L D DA +
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS 320
Query: 308 DMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
+ML +P+ TY +++G C R +A LL + +R+I+ + L+
Sbjct: 321 EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 107/243 (44%), Gaps = 17/243 (6%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
+ + TII +R + L+ E+ + YN++I C L + A D++
Sbjct: 433 VTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL-NAAQDLFQ 491
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRF---NKLHVCYVYLHAVRSLTKQMKAVGVIPDTFV 215
+M+ C PD T+ N LL F KL + QM + + DT
Sbjct: 492 EMISHGVC-PD----TITCNILLYGFCENEKLEEALELFEVI-----QMSKIDL--DTVA 539
Query: 216 LNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMK 275
N+II K +VDEA +F + ++G EP+ +Y+ + G C K ++ + +MK
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Query: 276 EKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRAD 335
+ P STY ++ + +IE++ +M N S D T K V + L + R D
Sbjct: 600 DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGRLD 658
Query: 336 EAF 338
++F
Sbjct: 659 KSF 661
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 106/238 (44%), Gaps = 14/238 (5%)
Query: 114 YQQAETLVEEVIAGACDGSIPLYNSIIRFCC--GRKFLFSRAFDVYNKMLRSEDCKPDLE 171
+ +A L ++++ + +N++I C GR A + NKM+ + D+
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVL---EAAALVNKMV-GKGLHIDVV 262
Query: 172 TYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDE 231
TY + N + + + + +L +M+ + PD + + II K +
Sbjct: 263 TYGTIVNGMCKMGDT--------KSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSD 314
Query: 232 AIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVC 291
A +F EM G PN ++Y+ + G C GR + ++M E+ + P T+ ++
Sbjct: 315 AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS 374
Query: 292 SLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDI 349
+ + + +A ++ +ML PD +TY +++ G C+ R D+A + D D+
Sbjct: 375 ASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDV 432
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 88/180 (48%), Gaps = 15/180 (8%)
Query: 199 SLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGL 258
SL ++M+ + + + N++IK + C ++ ++ F ++ G +P+ +++ + GL
Sbjct: 127 SLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGL 186
Query: 259 CEKGRVNQGL---------GF------YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAI 303
C + R+++ L GF + +M E L P T+ ++ L ++ R +A
Sbjct: 187 CLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA 246
Query: 304 EVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
++ M+G D +TY T++ G+C+ A +LL + ++ I +Y ++D L
Sbjct: 247 ALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 70/162 (43%)
Query: 199 SLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGL 258
+L +M G+ D I+ K + A+ + +M +P+ YS I L
Sbjct: 247 ALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306
Query: 259 CEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDH 318
C+ G + + EM EK + P+ TY ++ R+ DA +L DM+ +PD
Sbjct: 307 CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV 366
Query: 319 LTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
LT+ ++ +E + EA L DE R I Y +++
Sbjct: 367 LTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 82/202 (40%), Gaps = 23/202 (11%)
Query: 177 YNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLE-------- 228
+N L++ F H L LTK +G PD N ++ + CLE
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTK----LGFQPDVVTFNTLL--HGLCLEDRISEALA 197
Query: 229 ---------VDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCL 279
EA+ +F +M G P +++ + GLC +GRV + +M K L
Sbjct: 198 LFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 257
Query: 280 RPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFD 339
TY IV + + A+ +L M PD + Y +++ LC++ +A
Sbjct: 258 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY 317
Query: 340 LLDECKKRDISMSEKMYKTLLD 361
L E ++ I+ + Y ++D
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMID 339
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 93/196 (47%), Gaps = 19/196 (9%)
Query: 161 LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVR-----SLTKQMKAVGVIPDTFV 215
++ +PD+ +T L + Y HA + L M+ G P+
Sbjct: 262 MKEAGLEPDIVVFTNLLSG-------------YAHAGKMADAYDLMNDMRKRGFEPNVNC 308
Query: 216 LNMIIKAYSKCLE-VDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEM 274
++I+A + + +DEA+RVF EM YGCE + +Y+ + G C+ G +++G +M
Sbjct: 309 YTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDM 368
Query: 275 KEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRA 334
++K + PS TY+ I+ + +FE+ +E++ M PD L Y V+ C+
Sbjct: 369 RKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEV 428
Query: 335 DEAFDLLDECKKRDIS 350
EA L +E + +S
Sbjct: 429 KEAVRLWNEMEANGLS 444
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 83/171 (48%), Gaps = 6/171 (3%)
Query: 196 AVRSLTKQMKAVG---VIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYS 252
AV L ++M+ + P+ FV+ +++ ++ V +A+ V EM YG EP+ Y +
Sbjct: 149 AVWGLIEEMRKTNPELIEPELFVV--LMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFG 206
Query: 253 YIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGN 312
+ LC+ G V + +++M+EK P+ + ++ + + +A EVL M
Sbjct: 207 CLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEA 265
Query: 313 SRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
PD + + +L G + +A+DL+++ +KR + Y L+ L
Sbjct: 266 GLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQAL 316
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 136 YNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLH 195
Y +I+ C + A V+ +M R C+ D+ TYT L + + + +
Sbjct: 309 YTVLIQALCRTEKRMDEAMRVFVEMERY-GCEADIVTYTALISGFCK--------WGMID 359
Query: 196 AVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIA 255
S+ M+ GV+P I+ A+ K + +E + + +M GC P+ Y+ +
Sbjct: 360 KGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVI 419
Query: 256 RGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDML--GNS 313
R C+ G V + + + EM+ L P T+VI++ +A +M+ G
Sbjct: 420 RLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIF 479
Query: 314 RSPDHLTYKTVLEGLCRERRADEAFDL 340
+P + T K++L L R+ + + A D+
Sbjct: 480 SAPQYGTLKSLLNNLVRDDKLEMAKDV 506
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 118/298 (39%), Gaps = 47/298 (15%)
Query: 51 QFETWVNHLKPGFTPSDVDRALTSVSDP-DLALDIFRWTAQQRSYNHTDLNYLTIIKQLN 109
+ E +N P + R L+ D +L F W +Q Y H+ +++ L+
Sbjct: 83 KLELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILS 142
Query: 110 AGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPD 169
R++ L+EE+ + E +P+
Sbjct: 143 KMRQFGAVWGLIEEM----------------------------------RKTNPELIEPE 168
Query: 170 LETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEV 229
L + L+RRF ++ AV L +M G+ PD +V ++ A K V
Sbjct: 169 L------FVVLMRRFASANMVK---KAVEVLD-EMPKYGLEPDEYVFGCLLDALCKNGSV 218
Query: 230 DEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVII 289
EA +VF +M PN ++ + G C +G++ + +MKE L P + +
Sbjct: 219 KEASKVFEDM-REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNL 277
Query: 290 VCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR-ERRADEAFDLLDECKK 346
+ A + DA +++ DM P+ Y +++ LCR E+R DEA + E ++
Sbjct: 278 LSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMER 335
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 125/271 (46%), Gaps = 19/271 (7%)
Query: 81 ALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVI--AGACDGSIPLYN- 137
A F W Q Y+H + Y +I L++ + + +V +++ + ++ L +
Sbjct: 142 AFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDV 201
Query: 138 --SIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLH 195
I+R C R + F K +R + +P++ + +L ++L + C +
Sbjct: 202 LLEILRKYCERYLTHVQKF-AKRKRIRVK-TQPEINAFNMLLDALCK-------CGLVKE 252
Query: 196 AVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIA 255
+L ++M+ V PD N++ + + + +A+++ EM G +P ++Y
Sbjct: 253 G-EALLRRMRH-RVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAI 310
Query: 256 RGLCEKGRVNQGLGFYKEMKEK---CLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGN 312
C+ G V++ + M K P+ T+ +++ +LA + + E+ E++ M+
Sbjct: 311 DTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMIST 370
Query: 313 SRSPDHLTYKTVLEGLCRERRADEAFDLLDE 343
PD TYK V+EG+C + DEA+ LDE
Sbjct: 371 GCLPDVSTYKDVIEGMCMAEKVDEAYKFLDE 401
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 110/252 (43%), Gaps = 13/252 (5%)
Query: 112 RRYQQAETLVEEVI-AGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLR--SEDCKP 168
R ++A L+EE+I AG + +I FC + + A D+++ M+ S P
Sbjct: 282 RDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFC--QAGMVDEAADLFDFMITKGSAVSAP 339
Query: 169 DLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLE 228
+T+ L+ +L + +K C+ L +M + G +PD +I+ +
Sbjct: 340 TAKTFALMIVALAKN-DKAEECF-------ELIGRMISTGCLPDVSTYKDVIEGMCMAEK 391
Query: 229 VDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVI 288
VDEA + EM G P+ +Y+ R LCE + ++ L Y M E PS TY +
Sbjct: 392 VDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNM 451
Query: 289 IVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRD 348
++ + A +M D TY ++ GL RA EA LL+E +
Sbjct: 452 LISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKG 511
Query: 349 ISMSEKMYKTLL 360
+ + +++ + L
Sbjct: 512 LKLPYRVFDSFL 523
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 2/164 (1%)
Query: 200 LTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLC 259
+TK TF L +I A +K + +E + M GC P+ +Y + G+C
Sbjct: 330 ITKGSAVSAPTAKTFAL--MIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMC 387
Query: 260 EKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHL 319
+V++ F EM K P TY + L +R+ ++A+++ M+ + +P
Sbjct: 388 MAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQ 447
Query: 320 TYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
TY ++ D AF+ E KRD + Y +++ L
Sbjct: 448 TYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGL 491
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 137/307 (44%), Gaps = 16/307 (5%)
Query: 62 GFTPSDVD-----RALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQ 116
G P V R ++ D ++A +R ++ T Y T+I L + +
Sbjct: 322 GLVPDSVSYNILIRGCSNNGDLEMAF-AYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEA 380
Query: 117 AETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLL 176
AE L+ E+ YN +I C + +AF ++++M+ ++ +P TYT L
Sbjct: 381 AEILIREIREKGIVLDSVTYNILINGYC-QHGDAKKAFALHDEMM-TDGIQPTQFTYTSL 438
Query: 177 YNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVF 236
L R+ NK L +++ G+ PD ++N ++ + +D A +
Sbjct: 439 IYVLCRK-NKTR-------EADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLL 490
Query: 237 HEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMD 296
EM + P+ +Y+ + RGLC +G+ + EMK + ++P +Y ++ +
Sbjct: 491 KEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKK 550
Query: 297 RRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMY 356
+ A V +ML +P LTY +L+GL + + + A +LL E K I ++ +
Sbjct: 551 GDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSF 610
Query: 357 KTLLDDL 363
++++ +
Sbjct: 611 CSVIEAM 617
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 111/267 (41%), Gaps = 13/267 (4%)
Query: 97 TDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDV 156
T + Y T+++ + R + A ++ E+ + + YN I+ + C RA +V
Sbjct: 259 TIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNE----GRASEV 314
Query: 157 YNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVL 216
+M + PD +Y +L L + + Y +M G++P +
Sbjct: 315 LREM-KEIGLVPDSVSYNILIRGCSNN-GDLEMAFAY-------RDEMVKQGMVPTFYTY 365
Query: 217 NMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKE 276
N +I +++ A + E+ G ++ +Y+ + G C+ G + + EM
Sbjct: 366 NTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMT 425
Query: 277 KCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADE 336
++P+ TY ++ L + +A E+ ++G PD + T+++G C D
Sbjct: 426 DGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDR 485
Query: 337 AFDLLDECKKRDISMSEKMYKTLLDDL 363
AF LL E I+ + Y L+ L
Sbjct: 486 AFSLLKEMDMMSINPDDVTYNCLMRGL 512
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 125/293 (42%), Gaps = 39/293 (13%)
Query: 56 VNHLKPGFTPSDVDRALTS-VSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRY 114
V H+ TPS V L S V P+LA + R T + +I +L++ +
Sbjct: 62 VEHVADKLTPSLVSTTLLSLVKTPNLAFNFVNHIDLYRLDFQTQCLAIAVISKLSSPKPV 121
Query: 115 QQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLET-Y 173
Q L++EV+ NSI +++++++ + D LET
Sbjct: 122 TQ---LLKEVVTSR-------KNSI--------------RNLFDELVLAHD---RLETKS 154
Query: 174 TLLYNSLLRRFNKLHVCYVYLHAVRSLTK---QMKAVGVIPDTFVLNMIIKAYSKCLEVD 230
T+L++ L+R C L V + MK G P T N I+ S+ ++
Sbjct: 155 TILFDLLVR-------CCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIE 207
Query: 231 EAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIV 290
A + +M + N Y+++ + LC++G++ + GF M+ ++P+ TY +V
Sbjct: 208 NAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLV 267
Query: 291 CSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDE 343
++ R E A ++ +M PD TY +L +C E RA E + E
Sbjct: 268 QGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKE 320
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 109/288 (37%), Gaps = 27/288 (9%)
Query: 81 ALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYN-SI 139
A F W Q Y H+ Y ++ L R + LV E+ + L S
Sbjct: 149 AYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSK 208
Query: 140 IRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYL----- 194
+ + +++A D + +M +S K D L ++L++ + H V+L
Sbjct: 209 VMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT 268
Query: 195 ------------HA---------VRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAI 233
H R++ MK PD ++AY K +
Sbjct: 269 IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVN 328
Query: 234 RVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSL 293
+ EM GC PN +Y+ + L + +V + LG Y++MKE P Y ++ L
Sbjct: 329 EMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHIL 388
Query: 294 AMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLL 341
+ RF+DA E+ DM D L Y T++ R + A LL
Sbjct: 389 SKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLL 436
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 107/257 (41%), Gaps = 15/257 (5%)
Query: 111 GRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDL 170
R++ A +++ + + Y S + C ++ F R ++ +M R C P++
Sbjct: 286 ARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYC-KEGDFRRVNEMLEEM-RENGCNPNV 343
Query: 171 ETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVD 230
TYT++ +SL + VY ++MK G +PD + +I SK
Sbjct: 344 VTYTIVMHSLGKSKQVAEALGVY--------EKMKEDGCVPDAKFYSSLIHILSKTGRFK 395
Query: 231 EAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMK----EKCLRPSTSTY 286
+A +F +M G + Y+ + R L K M+ E C P+ TY
Sbjct: 396 DAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESC-SPNVETY 454
Query: 287 VIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKK 346
++ ++ + +L M+ N S D TY ++ GLC + +EA +E +
Sbjct: 455 APLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVR 514
Query: 347 RDISMSEKMYKTLLDDL 363
+ + + K L+D+L
Sbjct: 515 KGMVPRDSTCKMLVDEL 531
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 122/270 (45%), Gaps = 10/270 (3%)
Query: 91 QRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLF 150
+ Y + + T+I L + +A L++ ++ C + Y +++ C R
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDT- 234
Query: 151 SRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVI 210
A ++ NKM ++ +E ++Y++++ K Y + +L +M+ GV
Sbjct: 235 DLALNLLNKMEAAK-----IEANVVIYSTVIDSLCK----YRHEDDALNLFTEMENKGVR 285
Query: 211 PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGF 270
P+ + +I +A R+ +M PN ++S + +KG++ +
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 345
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
Y+EM ++ + P+ TY ++ M R +A ++L M+ P+ +TY T++ G C+
Sbjct: 346 YEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCK 405
Query: 331 ERRADEAFDLLDECKKRDISMSEKMYKTLL 360
+R D+ +L E +R + + Y TL+
Sbjct: 406 AKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 111/233 (47%), Gaps = 12/233 (5%)
Query: 142 FCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLR--------RFNKLHVCYVY 193
FC R F ++D Y ++LR+ +L+ L+ + + F+KL
Sbjct: 32 FCRRRAFSGKTSYD-YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAK 90
Query: 194 LHA---VRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYS 250
++ V S ++M+ +G+ + + N++I + +C + A+ + +M G EP+ +
Sbjct: 91 MNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVT 150
Query: 251 YSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDML 310
+ + G C R++ + +M E +P T T+ ++ L + + +A+ ++ M+
Sbjct: 151 LNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMV 210
Query: 311 GNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
PD +TY V+ GLC+ D A +LL++ + I + +Y T++D L
Sbjct: 211 QRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 133/302 (44%), Gaps = 15/302 (4%)
Query: 64 TPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEE 123
T V L D DLAL++ + + + Y T+I L R A L E
Sbjct: 220 TYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI-YSTVIDSLCKYRHEDDALNLFTE 278
Query: 124 VIAGACDGSIPLYNSIIRFCC--GRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLL 181
+ ++ Y+S+I C GR +S A + + M+ + P+L T++ L ++ +
Sbjct: 279 MENKGVRPNVITYSSLISCLCNYGR---WSDASRLLSDMIERK-INPNLVTFSALIDAFV 334
Query: 182 RRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGL 241
++ L L ++M + P+ F + +I + + EA ++ M
Sbjct: 335 KKGK--------LVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIR 386
Query: 242 YGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFED 301
C PN +Y+ + G C+ RV++G+ ++EM ++ L +T TY ++ R ++
Sbjct: 387 KDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 446
Query: 302 AIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
A V M+ P+ LTY +L+GLC+ + +A + + ++ + Y +++
Sbjct: 447 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 506
Query: 362 DL 363
+
Sbjct: 507 GM 508
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 116/254 (45%), Gaps = 16/254 (6%)
Query: 111 GRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFD---VYNKMLRSEDCK 167
G R A LV++++ + ++I FL ++A + + ++M++ C+
Sbjct: 161 GNRISDAVALVDQMVEMGYKPDTVTFTTLIHGL----FLHNKASEAVALIDRMVQ-RGCQ 215
Query: 168 PDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCL 227
PDL TY + N L +R + +L +M+A + + + + +I + K
Sbjct: 216 PDLVTYGAVVNGLCKRGDT--------DLALNLLNKMEAAKIEANVVIYSTVIDSLCKYR 267
Query: 228 EVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYV 287
D+A+ +F EM G PN +YS + LC GR + +M E+ + P+ T+
Sbjct: 268 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFS 327
Query: 288 IIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKR 347
++ + + A ++ +M+ S P+ TY +++ G C R EA +L+ ++
Sbjct: 328 ALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRK 387
Query: 348 DISMSEKMYKTLLD 361
D + Y TL++
Sbjct: 388 DCLPNVVTYNTLIN 401
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 130/292 (44%), Gaps = 15/292 (5%)
Query: 73 TSVSDPDL--ALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACD 130
T +SD +L A+ +F AQ R + + + + ++ + ++ + E++
Sbjct: 52 TGLSDIELDDAIGLFGVMAQSRPF-PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGIS 110
Query: 131 GSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVC 190
++ YN +I C R S A + KM++ +PD+ T NSLL F C
Sbjct: 111 HNLYTYNILINCFC-RCSRLSLALALLGKMMKL-GYEPDIVTL----NSLLNGF-----C 159
Query: 191 YVY-LHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAY 249
+ + +L QM +G PDT +I + EA+ + M GC+P+
Sbjct: 160 HGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLV 219
Query: 250 SYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDM 309
+Y + GLC++G + L +M+ + + Y ++ SL R +DA+ + +M
Sbjct: 220 TYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 279
Query: 310 LGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
P+ +TY +++ LC R +A LL + +R I+ + + L+D
Sbjct: 280 ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALID 331
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 120/271 (44%), Gaps = 17/271 (6%)
Query: 66 SDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVI 125
S V +L D AL++F + + + Y ++I L R+ A L+ ++I
Sbjct: 257 STVIDSLCKYRHEDDALNLFT-EMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 126 AGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKML-RSEDCKPDLETYTLLYNS--LLR 182
+ ++ ++++I +K +A +Y +M+ RS D P++ TY+ L N +L
Sbjct: 316 ERKINPNLVTFSALIDAFV-KKGKLVKAEKLYEEMIKRSID--PNIFTYSSLINGFCMLD 372
Query: 183 RFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLY 242
R L + + + M +P+ N +I + K VD+ + +F EM
Sbjct: 373 R----------LGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQR 422
Query: 243 GCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDA 302
G N +Y+ + G + + +K+M + P+ TY I++ L + + A
Sbjct: 423 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 482
Query: 303 IEVLFDMLGNSRSPDHLTYKTVLEGLCRERR 333
+ V + ++ PD TY ++EG+C+ +
Sbjct: 483 MVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 86/181 (47%), Gaps = 11/181 (6%)
Query: 91 QRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLF 150
+RS + Y ++I R +A+ ++E +I C ++ YN++I C K +
Sbjct: 351 KRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRV- 409
Query: 151 SRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVI 210
+ +++ +M + L T+ Y +L+ F + C + + KQM +VGV
Sbjct: 410 DKGMELFREM-----SQRGLVGNTVTYTTLIHGFFQARDC----DNAQMVFKQMVSVGVH 460
Query: 211 PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGF 270
P+ N+++ K ++ +A+ VF + EP+ Y+Y+ + G+C+ G+ G G
Sbjct: 461 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG-GI 519
Query: 271 Y 271
Y
Sbjct: 520 Y 520
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/319 (18%), Positives = 132/319 (41%), Gaps = 40/319 (12%)
Query: 81 ALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEE-------------VIAG 127
A F W A+++ + H Y +++ L R+++ +++EE +
Sbjct: 178 AFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMK 237
Query: 128 ACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRS------------------EDCKPD 169
A + ++ F +K+ F + N +L S E P+
Sbjct: 238 AFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPN 297
Query: 170 LETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEV 229
+ TYT+L N R N + ++ M G+ PD N++++ + ++
Sbjct: 298 MMTYTVLLNGWCRVRNLIEAARIW--------NDMIDHGLKPDIVAHNVMLEGLLRSMKK 349
Query: 230 DEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVII 289
+AI++FH M G PN SY+ + R C++ + + ++ +M + L+P + Y +
Sbjct: 350 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 409
Query: 290 VCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDI 349
+ ++ + E+L +M PD TY +++ + ++ + + ++ + +I
Sbjct: 410 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI 469
Query: 350 SMSEKMYKTLLDDLHYVCR 368
S + ++ ++V R
Sbjct: 470 EPSIHTFNMIMKS-YFVAR 487
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 92/239 (38%), Gaps = 28/239 (11%)
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNK------LHV---------CYVYLHAV 197
A ++N M+ KPD+ + ++ LLR K HV Y +
Sbjct: 317 AARIWNDMI-DHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMI 375
Query: 198 RSLTKQ------------MKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCE 245
R KQ M G+ PD V +I + ++D + EM G
Sbjct: 376 RDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP 435
Query: 246 PNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEV 305
P+ +Y+ + + + + G Y +M + + PS T+ +I+ S + R +E V
Sbjct: 436 PDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAV 495
Query: 306 LFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLH 364
+M+ PD +Y ++ GL E ++ EA L+E + + Y D H
Sbjct: 496 WDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFH 554
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 125/299 (41%), Gaps = 39/299 (13%)
Query: 86 RWTAQQR--------SYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYN 137
RW+ QR N L + +I + +AE L +E++ YN
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405
Query: 138 SII-RFCCGRKF----------------LFSRAFDVYNKMLRSED--------CKPDLET 172
S+I FC +F F+ DVY + R ++ + L
Sbjct: 406 SMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465
Query: 173 YTLLYNSLLRRFNKLHVCYV-YLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDE 231
T YN+L+ F C V L+A + L ++M + GV PDT N+++ + + +++E
Sbjct: 466 NTTTYNTLIHGF-----CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Query: 232 AIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVC 291
A+ +F + + + + +Y+ I G+C+ +V++ + + + P TY +++
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Query: 292 SLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDIS 350
DA + M N PD+ TY T++ G + D++ +L+ E + S
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFS 639
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 102/232 (43%), Gaps = 10/232 (4%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
+ + TII +R + L+ E+ + YN++I C L + A D++
Sbjct: 433 VTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL-NAAQDLFQ 491
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
+M+ C PD T+ N LL F + L L + ++ + DT N+
Sbjct: 492 EMISHGVC-PD----TITCNILLYGFCENE----KLEEALELFEVIQMSKIDLDTVAYNI 542
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
II K +VDEA +F + ++G EP+ +Y+ + G C K ++ + +MK+
Sbjct: 543 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
P STY ++ + +IE++ +M N S D T K E +CR
Sbjct: 603 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICR 654
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 128/293 (43%), Gaps = 18/293 (6%)
Query: 79 DLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNS 138
D A+D F + + R + +T ++ +I R A +L ++ +I +N
Sbjct: 88 DDAIDFFDYMVRSRPF-YTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 139 IIR-FCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLL--RRFNKLHVCYVY-- 193
+I+ FC K FS + K+ + +PD+ T+ L + L R ++ + Y
Sbjct: 147 LIKCFCDCHKLSFS--LSTFGKLTKL-GFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 194 ----LHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLE--VDEAIRVFHEMGLYGCEPN 247
L AV +L QM +G+ P N +I CLE V EA + ++M G +
Sbjct: 204 ETGFLEAV-ALFDQMVEIGLTPVVITFNTLINGL--CLEGRVLEAAALVNKMVGKGLHID 260
Query: 248 AYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLF 307
+Y I G+C+ G L +M+E ++P Y I+ L D DA +
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS 320
Query: 308 DMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
+ML +P+ TY +++G C R +A LL + +R+I+ + L+
Sbjct: 321 EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 113/271 (41%), Gaps = 23/271 (8%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKM 160
Y II +L + A+ L E++ ++ YN +I C F R D ++
Sbjct: 299 YSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS----FGRWSDA-QRL 353
Query: 161 LR---SEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLN 217
LR + PD+ T+ L ++ ++ L L +M + PDT N
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGK--------LFEAEKLCDEMLHRCIFPDTVTYN 405
Query: 218 MIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEK 277
+I + K D+A +F M P+ +++ I C RV++G+ +E+ +
Sbjct: 406 SMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461
Query: 278 CLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEA 337
L +T+TY ++ A ++ +M+ + PD +T +L G C + +EA
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521
Query: 338 FDLLDECKKRDISMSEKMYKTLLDDLHYVCR 368
+L + + I + Y + +H +C+
Sbjct: 522 LELFEVIQMSKIDLDTVAYNII---IHGMCK 549
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 111/250 (44%), Gaps = 18/250 (7%)
Query: 114 YQQAETLVEEVIAGACDGSIPLYNSIIRFCC--GRKFLFSRAFDVYNKMLRSEDCKPDLE 171
+ +A L ++++ + +N++I C GR A + NKM+ + D+
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVL---EAAALVNKMV-GKGLHIDVV 262
Query: 172 TYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDE 231
TY + N + + + + +L +M+ + PD + + II K +
Sbjct: 263 TYGTIVNGMCKMGDT--------KSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSD 314
Query: 232 AIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVC 291
A +F EM G PN ++Y+ + G C GR + ++M E+ + P T+ ++
Sbjct: 315 AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS 374
Query: 292 SLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISM 351
+ + + +A ++ +ML PD +TY +++ G C+ R D+A + D D+
Sbjct: 375 ASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVV- 433
Query: 352 SEKMYKTLLD 361
+ T++D
Sbjct: 434 ---TFNTIID 440
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 88/180 (48%), Gaps = 15/180 (8%)
Query: 199 SLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGL 258
SL ++M+ + + + N++IK + C ++ ++ F ++ G +P+ +++ + GL
Sbjct: 127 SLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGL 186
Query: 259 CEKGRVNQGL---------GF------YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAI 303
C + R+++ L GF + +M E L P T+ ++ L ++ R +A
Sbjct: 187 CLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA 246
Query: 304 EVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
++ M+G D +TY T++ G+C+ A +LL + ++ I +Y ++D L
Sbjct: 247 ALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 92/226 (40%), Gaps = 28/226 (12%)
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPD 212
A +Y KM E + L Y+ +N L++ F H L LTK +G PD
Sbjct: 125 AISLYRKM---EIRRIPLNIYS--FNILIKCFCDCHKLSFSLSTFGKLTK----LGFQPD 175
Query: 213 TFVLNMIIKAYSKCLE-----------------VDEAIRVFHEMGLYGCEPNAYSYSYIA 255
N ++ + CLE EA+ +F +M G P +++ +
Sbjct: 176 VVTFNTLL--HGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLI 233
Query: 256 RGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRS 315
GLC +GRV + +M K L TY IV + + A+ +L M
Sbjct: 234 NGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIK 293
Query: 316 PDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
PD + Y +++ LC++ +A L E ++ I+ + Y ++D
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 104/248 (41%), Gaps = 10/248 (4%)
Query: 116 QAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTL 175
+A ++E++ C I YNS++ + C R L A V +L LE T+
Sbjct: 262 RAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVA-SVIQHILSH-----GLELNTV 315
Query: 176 LYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRV 235
YN+LL + Y V + M P N++I K + AI
Sbjct: 316 TYNTLLHSL----CSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDF 371
Query: 236 FHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAM 295
F++M C P+ +Y+ + + ++G V+ + +K C P TY ++ LA
Sbjct: 372 FYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAK 431
Query: 296 DRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKM 355
+ A+E+ ML PD +T ++++ G CR +EA +L E R +
Sbjct: 432 KGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGST 491
Query: 356 YKTLLDDL 363
Y+ ++ L
Sbjct: 492 YRLVIQGL 499
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 6/167 (3%)
Query: 200 LTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLC 259
+ + M G +PDT NMII K + A+ + +M L G P+ +Y+ + R +
Sbjct: 161 ILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMF 220
Query: 260 EKGRVNQGLGFYKEMKEKCLRPSTSTYVI---IVCSLAMDRRFEDAIEVLFDMLGNSRSP 316
+ G Q + F+K+ + P TY + +VC R AIEVL DM P
Sbjct: 221 DYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSAR---AIEVLEDMAVEGCYP 277
Query: 317 DHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
D +TY +++ CR +E ++ + ++ Y TLL L
Sbjct: 278 DIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSL 324
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 106/229 (46%), Gaps = 12/229 (5%)
Query: 115 QQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYT 174
++ ++++ +++ + + YN+++ C ++ + ++ N M ++ C P + TY
Sbjct: 296 EEVASVIQHILSHGLELNTVTYNTLLHSLCSHEY-WDEVEEILNIMYQTSYC-PTVITYN 353
Query: 175 LLYNSLLR-RFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAI 233
+L N L + R + + Y QM +PD N ++ A SK VD+AI
Sbjct: 354 ILINGLCKARLLSRAIDFFY---------QMLEQKCLPDIVTYNTVLGAMSKEGMVDDAI 404
Query: 234 RVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSL 293
+ + C P +Y+ + GL +KG + + L Y +M + + P T ++
Sbjct: 405 ELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGF 464
Query: 294 AMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLD 342
E+A +VL + TY+ V++GLC+++ + A ++++
Sbjct: 465 CRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVE 513
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 102/239 (42%), Gaps = 10/239 (4%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
+ Y T++ L + + + E ++ + + ++ YN +I C + L SRA D +
Sbjct: 315 VTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLC-KARLLSRAIDFFY 373
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
+ML + C PD+ TY N++L +K + + L +K P N
Sbjct: 374 QMLE-QKCLPDIVTY----NTVLGAMSKEGM----VDDAIELLGLLKNTCCPPGLITYNS 424
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
+I +K + +A+ ++H+M G P+ + + G C V + KE +
Sbjct: 425 VIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRG 484
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEA 337
STY +++ L + E AIEV+ ML PD Y +++G+ EA
Sbjct: 485 NGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEA 543
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 86/212 (40%), Gaps = 13/212 (6%)
Query: 131 GSIP---LYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKL 187
G +P YN II C + + R V + + PD+ TY + + N
Sbjct: 169 GGVPDTITYNMIIGNLCKKGHI--RTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAE 226
Query: 188 HVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPN 247
A+R Q++ G P ++++ + AI V +M + GC P+
Sbjct: 227 Q-------AIRFWKDQLQN-GCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPD 278
Query: 248 AYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLF 307
+Y+ + C +G + + + + L +T TY ++ SL +++ E+L
Sbjct: 279 IVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILN 338
Query: 308 DMLGNSRSPDHLTYKTVLEGLCRERRADEAFD 339
M S P +TY ++ GLC+ R A D
Sbjct: 339 IMYQTSYCPTVITYNILINGLCKARLLSRAID 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 60/125 (48%)
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
+++ ++ ++D+A+ + M + G P+ +Y+ I LC+KG + L ++M
Sbjct: 145 LVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSG 204
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
P TY ++ + E AI D L N P +TY ++E +CR + A
Sbjct: 205 SPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAI 264
Query: 339 DLLDE 343
++L++
Sbjct: 265 EVLED 269
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 121/267 (45%), Gaps = 26/267 (9%)
Query: 90 QQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSII--RFCCGRK 147
+ + + T+ +Y +++ G Y E + + G S L +++ F C
Sbjct: 553 KSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRAL 612
Query: 148 FLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAV 207
RAF ++ K KPD+ +++NS+L F + ++ Y A + + ++
Sbjct: 613 AGSERAFTLFKK----HGYKPDM----VIFNSMLSIFTRNNM---YDQA-EGILESIRED 660
Query: 208 GVIPDTFVLNMIIKAY---SKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRV 264
G+ PD N ++ Y +C + +E ++ + L +P+ SY+ + +G C +G +
Sbjct: 661 GLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQL---KPDLVSYNTVIKGFCRRGLM 717
Query: 265 NQGLGFYKEMKEKCLRPSTSTYVIIVC---SLAMDRRFEDAIEVLFDMLGNSRSPDHLTY 321
+ + EM E+ +RP TY V ++ M ED IE M N P+ LT+
Sbjct: 718 QEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIEC---MAKNDCRPNELTF 774
Query: 322 KTVLEGLCRERRADEAFDLLDECKKRD 348
K V++G CR + EA D + + K D
Sbjct: 775 KMVVDGYCRAGKYSEAMDFVSKIKTFD 801
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 111/260 (42%), Gaps = 9/260 (3%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKM 160
Y TI+ + +Y++A L E + ++ YN I+ + + V ++M
Sbjct: 213 YTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEM 272
Query: 161 LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMII 220
RS+ K D T + + ++ R L + ++K+ G P T N ++
Sbjct: 273 -RSKGLKFDEFTCSTVLSACAREG--------LLREAKEFFAELKSCGYEPGTVTYNALL 323
Query: 221 KAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLR 280
+ + K EA+ V EM C ++ +Y+ + G + G + M +K +
Sbjct: 324 QVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVM 383
Query: 281 PSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDL 340
P+ TY ++ + + ++A+++ + M P+ TY VL L ++ R++E +
Sbjct: 384 PNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKM 443
Query: 341 LDECKKRDISMSEKMYKTLL 360
L + K S + + T+L
Sbjct: 444 LCDMKSNGCSPNRATWNTML 463
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 120/269 (44%), Gaps = 15/269 (5%)
Query: 97 TDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRF---CCGRKFLFSRA 153
TDL ++++K L+ +++A L E ++ + G++ L + +I GR+ +S A
Sbjct: 137 TDL--VSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVA 194
Query: 154 FDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDT 213
+ +K+ E D+ YT + ++ R Y A+ L ++MK +G P
Sbjct: 195 AKLLDKIPLQEYLL-DVRAYTTILHAYSRTGK-------YEKAI-DLFERMKEMGPSPTL 245
Query: 214 FVLNMIIKAYSKCLEVDEAI-RVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
N+I+ + K I V EM G + + ++ S + +G + + F+
Sbjct: 246 VTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFA 305
Query: 273 EMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRER 332
E+K P T TY ++ + +A+ VL +M NS D +TY ++ R
Sbjct: 306 ELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAG 365
Query: 333 RADEAFDLLDECKKRDISMSEKMYKTLLD 361
+ EA +++ K+ + + Y T++D
Sbjct: 366 FSKEAAGVIEMMTKKGVMPNAITYTTVID 394
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 122/304 (40%), Gaps = 57/304 (18%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
+ Y T+I + +A L + C + YN+++ G+K SR+ ++
Sbjct: 387 ITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLL-GKK---SRSNEMIK 442
Query: 159 KM--LRSEDCKPDLETY----TLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPD 212
+ ++S C P+ T+ L N + +F V + ++MK+ G PD
Sbjct: 443 MLCDMKSNGCSPNRATWNTMLALCGNKGMDKF------------VNRVFREMKSCGFEPD 490
Query: 213 TFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
N +I AY +C +A +++ EM G +Y+ + L KG G
Sbjct: 491 RDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVIS 550
Query: 273 EMKEKCLRPSTSTYVIIVCSLAMD------RRFEDAIE---------VLFDML------- 310
+MK K +P+ ++Y +++ A R E+ I+ +L +L
Sbjct: 551 DMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCR 610
Query: 311 ---GNSRS----------PDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYK 357
G+ R+ PD + + ++L R D+A +L+ ++ +S Y
Sbjct: 611 ALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYN 670
Query: 358 TLLD 361
+L+D
Sbjct: 671 SLMD 674
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 100/238 (42%), Gaps = 20/238 (8%)
Query: 117 AETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLL 176
A + E+ + + YN+++ RK + +V + M +S+ KP +Y+L+
Sbjct: 510 ASKMYGEMTRAGFNACVTTYNALLN-ALARKGDWRSGENVISDM-KSKGFKPTETSYSLM 567
Query: 177 YNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVF 236
+ N L + + ++K + P +L ++ A KC + + R F
Sbjct: 568 LQCYAKGGNYL--------GIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAF 619
Query: 237 HEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMD 296
+G +P+ ++ + +Q G + ++E L P TY + MD
Sbjct: 620 TLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSL-----MD 674
Query: 297 ---RRFE--DAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDI 349
RR E A E+L + + PD ++Y TV++G CR EA +L E +R I
Sbjct: 675 MYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGI 732
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/319 (18%), Positives = 132/319 (41%), Gaps = 40/319 (12%)
Query: 81 ALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEE-------------VIAG 127
A F W A+++ + H Y +++ L R+++ +++EE +
Sbjct: 177 AFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMK 236
Query: 128 ACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRS------------------EDCKPD 169
A + ++ F +K+ F + N +L S E P+
Sbjct: 237 AFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPN 296
Query: 170 LETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEV 229
+ TYT+L N R N + ++ M G+ PD N++++ + ++
Sbjct: 297 MMTYTVLLNGWCRVRNLIEAARIW--------NDMIDHGLKPDIVAHNVMLEGLLRSMKK 348
Query: 230 DEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVII 289
+AI++FH M G PN SY+ + R C++ + + ++ +M + L+P + Y +
Sbjct: 349 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 408
Query: 290 VCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDI 349
+ ++ + E+L +M PD TY +++ + ++ + + ++ + +I
Sbjct: 409 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI 468
Query: 350 SMSEKMYKTLLDDLHYVCR 368
S + ++ ++V R
Sbjct: 469 EPSIHTFNMIMKS-YFVAR 486
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 92/239 (38%), Gaps = 28/239 (11%)
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNK------LHV---------CYVYLHAV 197
A ++N M+ KPD+ + ++ LLR K HV Y +
Sbjct: 316 AARIWNDMI-DHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMI 374
Query: 198 RSLTKQ------------MKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCE 245
R KQ M G+ PD V +I + ++D + EM G
Sbjct: 375 RDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP 434
Query: 246 PNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEV 305
P+ +Y+ + + + + G Y +M + + PS T+ +I+ S + R +E V
Sbjct: 435 PDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAV 494
Query: 306 LFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLH 364
+M+ PD +Y ++ GL E ++ EA L+E + + Y D H
Sbjct: 495 WDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFH 553
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 124/285 (43%), Gaps = 34/285 (11%)
Query: 113 RYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLET 172
R ++A L+E++ + C Y +I+ + C K + D+ KM + PD T
Sbjct: 327 RVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVE-VRDLMKKMAKEHGLVPDQVT 385
Query: 173 YTLLYNSLLR-------------------RFNKLHVCYVYLHAV---------RSLTKQM 204
Y L + L + R +KL + +HA+ + L +M
Sbjct: 386 YNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAI-VHALCKEGRMSEAKDLINEM 444
Query: 205 KAVG-VIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGR 263
+ G PD ++ + + EVD+A ++ M +G +PN SY+ + G+C G+
Sbjct: 445 LSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGK 504
Query: 264 VNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKT 323
+ +E P++ TY +I+ L + + +A +V+ +M+ P +
Sbjct: 505 SLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINL 564
Query: 324 VLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCR 368
+L+ LCR+ R EA ++EC + +++ + T+ +H C+
Sbjct: 565 LLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTV---IHGFCQ 606
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 130/321 (40%), Gaps = 51/321 (15%)
Query: 51 QFETWVNHLKPGFTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNA 110
+ E + +L PS V L S D +AL F W +Q Y H + Y ++++ L+
Sbjct: 160 KHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSK 219
Query: 111 GRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGR-KFLFSRAFDVYNKMLRSEDCKPD 169
+ C GS + + R R FSR Y+ R+ +
Sbjct: 220 TK---------------LCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYS---RAGQLRDA 261
Query: 170 LETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEV 229
L+ TL M+ GV P+ + N I + + +
Sbjct: 262 LKVLTL----------------------------MQRAGVEPNLLICNTTIDVFVRANRL 293
Query: 230 DEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVII 289
++A+R M + G PN +Y+ + RG C+ RV + + ++M K P +Y I
Sbjct: 294 EKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTI 353
Query: 290 VCSLAMDRRFEDAIEVLFDMLG-NSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRD 348
+ L ++R + +++ M + PD +TY T++ L + ADEA L + +++
Sbjct: 354 MGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKG 413
Query: 349 ISMSEKMYKTLLDDLHYVCRE 369
+ + Y + +H +C+E
Sbjct: 414 FRIDKLGYSAI---VHALCKE 431
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 129/305 (42%), Gaps = 17/305 (5%)
Query: 62 GFTPSDVD-----RALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQ 116
G P V LT D AL F AQ++ + L Y I+ L R +
Sbjct: 378 GLVPDQVTYNTLIHMLTKHDHADEAL-WFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSE 436
Query: 117 AETLVEEVIA-GACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTL 175
A+ L+ E+++ G C + Y +++ C R +A + +++ + KP+ +YT
Sbjct: 437 AKDLINEMLSKGHCPPDVVTYTAVVNGFC-RLGEVDKAKKLL-QVMHTHGHKPNTVSYTA 494
Query: 176 LYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRV 235
L N + R L R + + P++ ++I+ + ++ EA V
Sbjct: 495 LLNGMCRTGKSLEA--------REMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDV 546
Query: 236 FHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAM 295
EM L G P + + + LC GR ++ F +E K + + ++
Sbjct: 547 VREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQ 606
Query: 296 DRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKM 355
+ + A+ VL DM ++ D TY T+++ L ++ R EA +L+ + + I +
Sbjct: 607 NDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVT 666
Query: 356 YKTLL 360
Y+T++
Sbjct: 667 YRTVI 671
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 112/251 (44%), Gaps = 10/251 (3%)
Query: 81 ALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSII 140
A+ +F +Q Y Y+ +I L ++ ++A L +E+I C + +Y +++
Sbjct: 133 AIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALV 192
Query: 141 RFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSL 200
R F AF + +M S +C+PD+ TY++L S L+ F V+ L
Sbjct: 193 S-AYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFA--------FDKVQDL 243
Query: 201 TKQMKAVGVIPDTFVLNMIIKAYSKC-LEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLC 259
M+ G+ P+T N +I AY K + V+ + +G C+P++++ + R
Sbjct: 244 LSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFG 303
Query: 260 EKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHL 319
G++ Y++ + + P+ T+ I++ S ++ V+ M S +
Sbjct: 304 GNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIV 363
Query: 320 TYKTVLEGLCR 330
TY V++ R
Sbjct: 364 TYNVVIDAFGR 374
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 88/189 (46%), Gaps = 15/189 (7%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKM 160
Y +I L RR A +VE++ G + YN +I C + + A VY +
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDK----NNAEKVYEML 569
Query: 161 --LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
+ E KPD ++ YN+L+ F K + +V + +QM+ G+ P
Sbjct: 570 TDMEKEGKKPD----SITYNTLISFFGK----HKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYG-CEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEK 277
+I AY E+DEA+++F +MGL+ PN Y+ + + G Q L +EMK K
Sbjct: 622 VIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMK 681
Query: 278 CLRPSTSTY 286
+RP+ TY
Sbjct: 682 MVRPNVETY 690
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 107/265 (40%), Gaps = 19/265 (7%)
Query: 104 IIKQLNAGRRYQQAETLVEEVIAGACDGSIPL------YNSIIRFCC--GRKFLFSRAFD 155
+I L RR +A + E++ D + +N++I C GR A +
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGR---LKEAEE 391
Query: 156 VYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFV 215
+ +M E C P+ TY L + R L + + +MK + P+
Sbjct: 392 LLVRMKLEERCVPNAVTYNCLIDGYCRAGK--------LETAKEVVSRMKEDEIKPNVVT 443
Query: 216 LNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMK 275
+N I+ + ++ A+ F +M G + N +Y + C V + + +Y++M
Sbjct: 444 VNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKML 503
Query: 276 EKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRAD 335
E P Y ++ L RR DAI V+ + S D L Y ++ C + A+
Sbjct: 504 EAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAE 563
Query: 336 EAFDLLDECKKRDISMSEKMYKTLL 360
+ +++L + +K Y TL+
Sbjct: 564 KVYEMLTDMEKEGKKPDSITYNTLI 588
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 119/290 (41%), Gaps = 13/290 (4%)
Query: 84 IFRWTAQQRSYNHTDLNYLT-IIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRF 142
I R+++ S N +LT I L R A ++ +++ P +N+++
Sbjct: 247 ISRFSSHGVSPNSV---WLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLS- 302
Query: 143 CCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLL--RRFNKLHVCYVYLHAVRSL 200
C GR SR D+ KM + +PD+ T +L N+L RR ++ + + R+
Sbjct: 303 CLGRNMDISRMNDLVLKMDEVK-IRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTD 361
Query: 201 TKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYG-CEPNAYSYSYIARGLC 259
+ + D+ N +I K + EA + M L C PNA +Y+ + G C
Sbjct: 362 DGNV----IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYC 417
Query: 260 EKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHL 319
G++ MKE ++P+ T IV + A+ DM + +
Sbjct: 418 RAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVV 477
Query: 320 TYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCRE 369
TY T++ C ++A ++ + S K+Y L+ L V R+
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 124/289 (42%), Gaps = 16/289 (5%)
Query: 79 DLALDIFRWTAQQRSYNHT-----DLNYLTIIKQL-NAGRRYQQAETLVEEVIAGACDGS 132
D AL++F +R+ + +++ T+I L GR + E LV + C +
Sbjct: 346 DEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPN 405
Query: 133 IPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYV 192
YN +I C R A +V ++M + ++ KP++ T + + R + L++ V
Sbjct: 406 AVTYNCLIDGYC-RAGKLETAKEVVSRM-KEDEIKPNVVTVNTIVGGMCRH-HGLNMAVV 462
Query: 193 YLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYS 252
+ M+ GV + +I A V++A+ + +M GC P+A Y
Sbjct: 463 FFM-------DMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYY 515
Query: 253 YIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGN 312
+ GLC+ R + + +++KE Y +++ E E+L DM
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKE 575
Query: 313 SRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
+ PD +TY T++ + + + ++++ ++ + + Y ++D
Sbjct: 576 GKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVID 624
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 97/241 (40%), Gaps = 30/241 (12%)
Query: 131 GSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSL---------L 181
G++ Y ++I CC + +A Y KML + C PD + Y L + L +
Sbjct: 474 GNVVTYMTLIHACCSVSNV-EKAMYWYEKMLEA-GCSPDAKIYYALISGLCQVRRDHDAI 531
Query: 182 RRFNKLH--------VCYVYL----------HAVRSLTKQMKAVGVIPDTFVLNMIIKAY 223
R KL + Y L V + M+ G PD+ N +I +
Sbjct: 532 RVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFF 591
Query: 224 SKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMK-EKCLRPS 282
K + + R+ +M G +P +Y + C G +++ L +K+M + P+
Sbjct: 592 GKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPN 651
Query: 283 TSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLD 342
T Y I++ + + F A+ + +M P+ TY + + L + + + L+D
Sbjct: 652 TVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMD 711
Query: 343 E 343
E
Sbjct: 712 E 712
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/311 (18%), Positives = 128/311 (41%), Gaps = 39/311 (12%)
Query: 81 ALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEE-------------VIAG 127
A F W A+++ + H Y +++ L R+++ +++EE +
Sbjct: 178 AFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMK 237
Query: 128 ACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRS------------------EDCKPD 169
A + ++ F +K+ F + N +L S E P+
Sbjct: 238 AFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPN 297
Query: 170 LETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEV 229
+ TYT+L N R N + ++ M G+ PD N++++ + +
Sbjct: 298 MMTYTVLLNGWCRVRNLIEAARIW--------NDMIDQGLKPDIVAHNVMLEGLLRSRKK 349
Query: 230 DEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVII 289
+AI++FH M G PN SY+ + R C++ + + ++ +M + L+P + Y +
Sbjct: 350 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 409
Query: 290 VCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDI 349
+ ++ + E+L +M PD TY +++ + ++ + A + ++ + +I
Sbjct: 410 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEI 469
Query: 350 SMSEKMYKTLL 360
S + ++
Sbjct: 470 EPSIHTFNMIM 480
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 92/211 (43%), Gaps = 9/211 (4%)
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPD 212
A ++N M+ + KPD+ + ++ LLR K ++ H MK+ G P+
Sbjct: 317 AARIWNDMI-DQGLKPDIVAHNVMLEGLLRSRKKSDAIKLF-HV-------MKSKGPCPN 367
Query: 213 TFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
++I+ + K ++ AI F +M G +P+A Y+ + G + +++ K
Sbjct: 368 VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 427
Query: 273 EMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRER 332
EM+EK P TY ++ +A + E A + M+ N P T+ +++ R
Sbjct: 428 EMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMAR 487
Query: 333 RADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+ + +E K+ I + Y L+ L
Sbjct: 488 NYEMGRAVWEEMIKKGICPDDNSYTVLIRGL 518
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 133/291 (45%), Gaps = 12/291 (4%)
Query: 71 ALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQ-LNAGRRYQQAETLVEEVIAGAC 129
L V A ++ + +++ Y+ + +Y +II + G ET E G
Sbjct: 563 GLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKS 622
Query: 130 DGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHV 189
+ + I FC + A ++ ++M +S + K DL Y L + ++ N +
Sbjct: 623 PNVVTFTSLINGFCKSNRM--DLALEMTHEM-KSMELKLDLPAYGALIDGFCKK-NDMKT 678
Query: 190 CYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAY 249
Y +L ++ +G++P+ V N +I + ++D AI ++ +M G + +
Sbjct: 679 AY-------TLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLF 731
Query: 250 SYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDM 309
+Y+ + GL + G +N Y E+ + + P ++++V L+ +F A ++L +M
Sbjct: 732 TYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEM 791
Query: 310 LGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
+P+ L Y TV+ G RE +EAF L DE ++ I + ++ L+
Sbjct: 792 KKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLV 842
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/298 (19%), Positives = 131/298 (43%), Gaps = 33/298 (11%)
Query: 78 PDL--ALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPL 135
PDL ALD+ R + + Y ++I ++A +++E++ S+
Sbjct: 288 PDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIA 347
Query: 136 YNSIIR-FCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYL 194
S++ +C G + +A D++N+M E PD ++++ + Y+
Sbjct: 348 ATSLVNGYCKGNEL--GKALDLFNRM-EEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYM 404
Query: 195 HAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYI 254
+MK+V + P + +++ +I+ K + A+ +F N S+I
Sbjct: 405 --------RMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIF----------NDSFESWI 446
Query: 255 ARGL---------CEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEV 305
A G C++G+V+ F K M++K + P+ Y ++ + + + A +
Sbjct: 447 AHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSI 506
Query: 306 LFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+ML P++ TY +++G + + A+D++++ + +E +Y T+++ L
Sbjct: 507 FSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGL 564
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 125/292 (42%), Gaps = 34/292 (11%)
Query: 95 NHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGAC---------------------DGSI 133
N + N +I Q+NA ++ E + +I G C S
Sbjct: 532 NKDEQNAWDVINQMNASN-FEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSC 590
Query: 134 PLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCK-PDLETYTLLYNSLLRRFNKLHVCYV 192
YNSII S A + Y +M SE+ K P++ T+T L N + N++ +
Sbjct: 591 TSYNSIIDGFVKVGDTDS-AVETYREM--SENGKSPNVVTFTSLINGFCKS-NRMDLAL- 645
Query: 193 YLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYS 252
+T +MK++ + D +I + K ++ A +F E+ G PN Y+
Sbjct: 646 ------EMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYN 699
Query: 253 YIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGN 312
+ G G+++ + YK+M + TY ++ L D A ++ ++L
Sbjct: 700 SLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDL 759
Query: 313 SRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLH 364
PD + + ++ GL ++ + +A +L+E KK+D++ + +Y T++ H
Sbjct: 760 GIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHH 811
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/165 (19%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
Query: 198 RSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARG 257
+ + +M +GV D ++++A + + +EA+++F + G EP+ +S +
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283
Query: 258 LCEKGRVNQGLGFYKEMKEKCLRP-STSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSP 316
C+ + L +EM+ K P S TY ++ + + E+A+ V+ +M+G
Sbjct: 284 ACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPM 343
Query: 317 DHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
+ +++ G C+ +A DL + ++ ++ + M+ +++
Sbjct: 344 SVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVE 388
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 1/164 (0%)
Query: 199 SLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGL 258
SL K++ + V+N II A+++ ++D+ + + EM + C+P+ +Y+ + L
Sbjct: 163 SLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDIL 222
Query: 259 CEKGRVNQGLGFYKEMKEKC-LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPD 317
G VN+ LG MKE C + + TY ++ + RF+ + + +M+ PD
Sbjct: 223 GRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPD 282
Query: 318 HLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
L+Y V++ L R E+ L DE K+R I S +Y+ L+D
Sbjct: 283 LLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALID 326
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 8/159 (5%)
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
K ++ +CKPD+ TY NS+L + + L V S K+ +V V + N
Sbjct: 201 KEMKEWECKPDVITY----NSVLDILGRAGLVNEIL-GVLSTMKEDCSVSV--NIITYNT 253
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
++ K D + +++EM G EP+ SY+ + L G V + L + EMK++
Sbjct: 254 VLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQ 313
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPD 317
+RPS Y ++ L F+ A++ L D L N+ S D
Sbjct: 314 IRPSVYVYRALIDCLKKSGDFQSALQ-LSDELKNTSSLD 351
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 13/176 (7%)
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNK---LHVCYVYLHAVRSLTKQMKAVGVIPDTFV 215
K L + PD TYT YN LL+ K LHV Y ++ +R V PD
Sbjct: 183 KELTEKHSPPD--TYT--YNFLLKHLCKCKDLHVVYEFVDEMRD------DFDVKPDLVS 232
Query: 216 LNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMK 275
++I + EA+ + ++G G +P+ + Y+ I +G C + ++ +G YK+MK
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMK 292
Query: 276 EKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRE 331
E+ + P TY ++ L+ R E+A L M+ PD TY +++ G+CR+
Sbjct: 293 EEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRK 348
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 97/255 (38%), Gaps = 40/255 (15%)
Query: 150 FSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGV 209
S A ++N + + DL+ +NS+L+ + + V + + + K
Sbjct: 65 LSDAKSLFNSIAATSRIPLDLK----FHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 210 IPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLG 269
TF++ + + + RV + M G EP+ + R LCE GRV++
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKD 180
Query: 270 FYKEMKEKCLRPSTSTYVIIVCSLA-----------MDRRFED--------AIEVLFDML 310
KE+ EK P T TY ++ L +D +D + +L D +
Sbjct: 181 LMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNV 240
Query: 311 GNSRS-----------------PDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSE 353
NS++ PD Y T+++G C + EA + + K+ + +
Sbjct: 241 CNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQ 300
Query: 354 KMYKTLLDDLHYVCR 368
Y TL+ L R
Sbjct: 301 ITYNTLIFGLSKAGR 315
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 77/185 (41%), Gaps = 28/185 (15%)
Query: 105 IKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSE 164
++ L R +A+ L++E+ YN +++ C K L ++ ++M
Sbjct: 166 VRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHV-VYEFVDEMRDDF 224
Query: 165 DCKPDLETYTLLYNSLLRRFNKLHV---------------CYVYLHAVRS---------- 199
D KPDL ++T+L +++ N C++Y ++
Sbjct: 225 DVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEA 284
Query: 200 --LTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARG 257
+ K+MK GV PD N +I SK V+EA M G EP+ +Y+ + G
Sbjct: 285 VGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNG 344
Query: 258 LCEKG 262
+C KG
Sbjct: 345 MCRKG 349
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 9/208 (4%)
Query: 157 YNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVL 216
Y KML S+ +PD+ +LYN+L+ F K L A R++ M G+ PD
Sbjct: 368 YQKML-SKGLQPDI----VLYNTLVNGFCK----NGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 217 NMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKE 276
+I + + +V+ A+ + EM G E + +S + G+C++GRV +EM
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLR 478
Query: 277 KCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADE 336
++P TY +++ + + ++L +M + P +TY +L GLC+ +
Sbjct: 479 AGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKN 538
Query: 337 AFDLLDECKKRDISMSEKMYKTLLDDLH 364
A LLD + + Y TLL+ H
Sbjct: 539 ADMLLDAMLNIGVVPDDITYNTLLEGHH 566
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 109/245 (44%), Gaps = 10/245 (4%)
Query: 117 AETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLL 176
A+ + +E+ + ++ +N++I C L F + ++M +S +PD+ TY+ L
Sbjct: 259 AQKVFDEITKRSLQPTVVSFNTLINGYCKVGNL-DEGFRLKHQMEKSR-TRPDVFTYSAL 316
Query: 177 YNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVF 236
N+L + NK+ L +M G+IP+ + +I +S+ E+D +
Sbjct: 317 INALCKE-NKMD-------GAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESY 368
Query: 237 HEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMD 296
+M G +P+ Y+ + G C+ G + M + LRP TY ++
Sbjct: 369 QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRG 428
Query: 297 RRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMY 356
E A+E+ +M N D + + ++ G+C+E R +A L E + I + Y
Sbjct: 429 GDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTY 488
Query: 357 KTLLD 361
++D
Sbjct: 489 TMMMD 493
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 134/309 (43%), Gaps = 18/309 (5%)
Query: 63 FTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVE 122
FT S + AL + D A +F + R D+ + T+I + + +
Sbjct: 311 FTYSALINALCKENKMDGAHGLFDEMCK-RGLIPNDVIFTTLIHGHSRNGEIDLMKESYQ 369
Query: 123 EVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLR 182
++++ I LYN+++ C L + A ++ + M+R +PD TYT L + R
Sbjct: 370 KMLSKGLQPDIVLYNTLVNGFCKNGDLVA-ARNIVDGMIR-RGLRPDKITYTTLIDGFCR 427
Query: 183 RFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLY 242
+ + + K+M G+ D + ++ K V +A R EM
Sbjct: 428 GGD--------VETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRA 479
Query: 243 GCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDA 302
G +P+ +Y+ + C+KG G KEM+ PS TY +++ L + ++A
Sbjct: 480 GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA 539
Query: 303 IEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKM--YKTLL 360
+L ML PD +TY T+LEG R + + + +K +I + + YK+++
Sbjct: 540 DMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRY-----IQKPEIGIVADLASYKSIV 594
Query: 361 DDLHYVCRE 369
++L ++
Sbjct: 595 NELDRASKD 603
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 127/325 (39%), Gaps = 54/325 (16%)
Query: 85 FRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGS-----IPLYNSI 139
F++ + Q + T Y + + L + +A++L+E V++ S I L
Sbjct: 105 FKFISSQPGFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEMR 164
Query: 140 IRFCCGRKFLFSRAFDVYNKMLRSEDC--------KPDLETYTLLYNSLLRRFNKLHVCY 191
+ CG FL Y + D K + +LL R KL+
Sbjct: 165 VTPMCG--FLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPT- 221
Query: 192 VYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSY 251
+ ++ G + +V N+++ + K + +A +VF E+ +P S+
Sbjct: 222 ---GTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSF 278
Query: 252 SYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDA--------- 302
+ + G C+ G +++G +M++ RP TY ++ +L + + + A
Sbjct: 279 NTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCK 338
Query: 303 -----IEVLFDML--GNSRS-------------------PDHLTYKTVLEGLCRERRADE 336
+V+F L G+SR+ PD + Y T++ G C+
Sbjct: 339 RGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVA 398
Query: 337 AFDLLDECKKRDISMSEKMYKTLLD 361
A +++D +R + + Y TL+D
Sbjct: 399 ARNIVDGMIRRGLRPDKITYTTLID 423
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 4/192 (2%)
Query: 176 LYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRV 235
+YN+L+ KL + + M+A G IPDT N ++ Y V +A+
Sbjct: 680 VYNTLIATLCKLGMT----KKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALST 735
Query: 236 FHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAM 295
+ M G PN +Y+ I RGL + G + + + EMK + +RP TY ++ A
Sbjct: 736 YSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAK 795
Query: 296 DRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKM 355
+ ++ + +M+ + P TY ++ + +A +LL E KR +S +
Sbjct: 796 IGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTST 855
Query: 356 YKTLLDDLHYVC 367
Y T++ L +C
Sbjct: 856 YCTMISGLCKLC 867
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 121/273 (44%), Gaps = 12/273 (4%)
Query: 97 TDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSII-RFCCGRKFLFSRAFD 155
++LN +T L++ E +++ D + ++SII R C G K L
Sbjct: 223 SELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEG---G 279
Query: 156 VYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFV 215
+ + + P+ TYT L +SL + +Y HA+ +L QM G+ D V
Sbjct: 280 LLLREMEEMSVYPNHVTYTTLVDSLFK-------ANIYRHAL-ALYSQMVVRGIPVDLVV 331
Query: 216 LNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMK 275
+++ K ++ EA + F + PN +Y+ + GLC+ G ++ +M
Sbjct: 332 YTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQML 391
Query: 276 EKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRAD 335
EK + P+ TY ++ E+A+ +L M + P+ TY TV++GL + + +
Sbjct: 392 EKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEE 451
Query: 336 EAFDLLDECKKRDISMSEKMYKTLLDDLHYVCR 368
A +L E + + + + L++ L + R
Sbjct: 452 MAIELSKEMRLIGVEENNYILDALVNHLKRIGR 484
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 90/185 (48%), Gaps = 7/185 (3%)
Query: 168 PDLETY-TLLYNSLLRRFNKLHV-CYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYS- 224
PDL T +Y SL +L++ C A R+L+ M GV+PD+ + N +I ++
Sbjct: 47 PDLAPIKTRVYVSLFHTLFRLYLSCERLYGAARTLS-AMCTFGVVPDSRLWNSLIHQFNV 105
Query: 225 KCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTS 284
L D+ ++ +M G P+ ++ + + C+ GR++ + ++ + + T
Sbjct: 106 NGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTV 162
Query: 285 TYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDEC 344
TY ++ L ++A + L +M+ PD ++Y T+++G C+ A L+DE
Sbjct: 163 TYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI 222
Query: 345 KKRDI 349
+ ++
Sbjct: 223 SELNL 227
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 5/162 (3%)
Query: 204 MKAVGVIPDTFVLNMIIKAYSKCLEV--DEAIRVFHEMGLYGCEPNAYSYSYIARGLCEK 261
M+ G+ D N++I K +V D A + E G+ EP+ +++ + ++
Sbjct: 530 MQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGI---EPDIATFNIMMNSQRKQ 586
Query: 262 GRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTY 321
G L + +MK ++PS + I+V L + + E+AI +L M+ P+ TY
Sbjct: 587 GDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTY 646
Query: 322 KTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+ L+ + +RAD F + I +S ++Y TL+ L
Sbjct: 647 RIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATL 688
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/298 (18%), Positives = 128/298 (42%), Gaps = 26/298 (8%)
Query: 57 NHLKPGFTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYL--TIIKQLNAGRRY 114
N + GFT V L ++A+++ + + R + NY+ ++ L R
Sbjct: 429 NVVPNGFTYGTVIDGLFKAGKEEMAIEL---SKEMRLIGVEENNYILDALVNHLKRIGRI 485
Query: 115 QQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKM-----LRSEDCKPD 169
++ + LV+++++ Y S+I +F + D + ++ D
Sbjct: 486 KEVKGLVKDMVSKGVTLDQINYTSLID-------VFFKGGDEEAALAWAEEMQERGMPWD 538
Query: 170 LETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEV 229
+ +Y +L + +L+ F K+ + Y K M+ G+ PD N+++ + K +
Sbjct: 539 VVSYNVLISGMLK-FGKVGADWAY--------KGMREKGIEPDIATFNIMMNSQRKQGDS 589
Query: 230 DEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVII 289
+ ++++ +M G +P+ S + + LCE G++ + + +M + P+ +TY I
Sbjct: 590 EGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIF 649
Query: 290 VCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKR 347
+ + + +R + + +L Y T++ LC+ +A ++ + + R
Sbjct: 650 LDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEAR 707
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 89/237 (37%), Gaps = 43/237 (18%)
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
K +R + +PD+ T+ ++ NS ++ + + L +MK+ G+ P N+
Sbjct: 562 KGMREKGIEPDIATFNIMMNSQRKQGDS--------EGILKLWDKMKSCGIKPSLMSCNI 613
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSY------------------------SY- 253
++ + +++EAI + ++M L PN +Y SY
Sbjct: 614 VVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYG 673
Query: 254 ----------IARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAI 303
+ LC+ G + +M+ + P T T+ ++ + A+
Sbjct: 674 IKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKAL 733
Query: 304 EVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
M+ SP+ TY T++ GL E L E K R + + Y L+
Sbjct: 734 STYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALI 790
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 12/176 (6%)
Query: 200 LTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLC 259
L K + G+ P N +I Y K + EA ++ + LYG P+ SY+ +
Sbjct: 490 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 549
Query: 260 EKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAM------------DRRFEDAIEVLF 307
G +EMK + + P+ TY +I L +R FE + L
Sbjct: 550 NCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLR 609
Query: 308 DMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
DM PD +TY T+++ LCR + AF L+ K R++ S Y L+D L
Sbjct: 610 DMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSL 665
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 99/209 (47%), Gaps = 9/209 (4%)
Query: 161 LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMII 220
LR+ + K D+ + +NS++ + KL ++ +S + G++P + N++I
Sbjct: 210 LRTSEWK-DIGPSVVSFNSIMSGYCKLG----FVDMAKSFFCTVLKCGLVPSVYSHNILI 264
Query: 221 KAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLR 280
+ EA+ + +M +G EP++ +Y+ +A+G G ++ ++M +K L
Sbjct: 265 NGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLS 324
Query: 281 PSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTV-LEGLCRERRADEAFD 339
P TY I++C + + +L DML + + +V L GLC+ R DEA
Sbjct: 325 PDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALS 384
Query: 340 LLDECKKRDISMSEKMYKTLLDDLHYVCR 368
L ++ K +S Y + +H +C+
Sbjct: 385 LFNQMKADGLSPDLVAYSIV---IHGLCK 410
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 132/327 (40%), Gaps = 29/327 (8%)
Query: 51 QFETWVNHLKPGFTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNA 110
F V+ L+ +D ++ SD L++ F+ ++ H+ + L + L
Sbjct: 39 HFRGLVSELRHVHVEEIMDELMSESSD--LSVWFFKELRDIYAFRHSSFSTLLVSHVLAG 96
Query: 111 GRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCK-PD 169
RR+++ + ++E+++ +G+ + S FL SR V + + + K +
Sbjct: 97 QRRFKELQVILEQLLQE--EGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQN 154
Query: 170 LETYTLLYNSLLRRF---NKLHVCY---------VYLHAVRSLTKQMKAVGVI------- 210
L T YNS+L F +K+ Y Y V L +Q K +
Sbjct: 155 LNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSE 214
Query: 211 -----PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVN 265
P N I+ Y K VD A F + G P+ YS++ + GLC G +
Sbjct: 215 WKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIA 274
Query: 266 QGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVL 325
+ L +M + + P + TY I+ + A EV+ DML SPD +TY +L
Sbjct: 275 EALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILL 334
Query: 326 EGLCRERRADEAFDLLDECKKRDISMS 352
G C+ D LL + R ++
Sbjct: 335 CGQCQLGNIDMGLVLLKDMLSRGFELN 361
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 105/212 (49%), Gaps = 8/212 (3%)
Query: 149 LFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVG 208
+ S A++V ML + PD+ TYT+L + N + + V L + L++ +
Sbjct: 307 MISGAWEVIRDML-DKGLSPDVITYTILLCGQCQLGN-IDMGLVLLKDM--LSRGFELNS 362
Query: 209 VIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGL 268
+IP + +L+ + K +DEA+ +F++M G P+ +YS + GLC+ G+ + L
Sbjct: 363 IIPCSVMLSGLCKTG----RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 418
Query: 269 GFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGL 328
Y EM +K + P++ T+ ++ L +A +L ++ + + D + Y V++G
Sbjct: 419 WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGY 478
Query: 329 CRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
+ +EA +L + I+ S + +L+
Sbjct: 479 AKSGCIEEALELFKVVIETGITPSVATFNSLI 510
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 92/202 (45%), Gaps = 5/202 (2%)
Query: 161 LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMII 220
L S+ K +E ++ YN L + F+ L + +R + + G+ PD +++
Sbjct: 279 LASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDK----GLSPDVITYTILL 334
Query: 221 KAYSKCLEVDEAIRVFHEMGLYGCEPNAY-SYSYIARGLCEKGRVNQGLGFYKEMKEKCL 279
+ +D + + +M G E N+ S + GLC+ GR+++ L + +MK L
Sbjct: 335 CGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGL 394
Query: 280 RPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFD 339
P Y I++ L +F+ A+ + +M P+ T+ +L GLC++ EA
Sbjct: 395 SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARS 454
Query: 340 LLDECKKRDISMSEKMYKTLLD 361
LLD ++ +Y ++D
Sbjct: 455 LLDSLISSGETLDIVLYNIVID 476
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 114/268 (42%), Gaps = 25/268 (9%)
Query: 113 RYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLET 172
R +A +L ++ A + Y+ +I C + F A +Y++M + P+ T
Sbjct: 378 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLC-KLGKFDMALWLYDEMC-DKRILPNSRT 435
Query: 173 YTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEA 232
+ L L ++ L RSL + + G D + N++I Y+K ++EA
Sbjct: 436 HGALLLGLCQKG--------MLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 233 IRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCS 292
+ +F + G P+ +++ + G C+ + + +K L PS +Y ++ +
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Query: 293 LAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDE-----CKK- 346
A + E+ +M P ++TY + +GLCR + + +L E CK+
Sbjct: 548 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG 607
Query: 347 -RD-----ISMSEKMYKTLLDDLHYVCR 368
RD I + Y T+ + Y+CR
Sbjct: 608 LRDMESEGIPPDQITYNTI---IQYLCR 632
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 110/268 (41%), Gaps = 29/268 (10%)
Query: 115 QQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFS--RAFDVYNKMLRSEDCKPDLET 172
++A L + VI S+ +NS+I C + + + DV ++ P + +
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDV----IKLYGLAPSVVS 540
Query: 173 YTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEA 232
YT L ++ N ++ L ++MKA G+ P ++I K + + +
Sbjct: 541 YTTLMDAYANCGNT--------KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENC 592
Query: 233 IRVFHE------------MGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLR 280
V E M G P+ +Y+ I + LC ++ F + MK + L
Sbjct: 593 NHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLD 652
Query: 281 PSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDL 340
S++TY I++ SL + A ++ + + S Y T+++ C + + A L
Sbjct: 653 ASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKL 712
Query: 341 LDECKKRDISMSEKMYKTLLDDLHYVCR 368
+ R ++S + Y +++ L CR
Sbjct: 713 FHQLLHRGFNVSIRDYSAVINRL---CR 737
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 113/261 (43%), Gaps = 14/261 (5%)
Query: 91 QRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCC--GRKF 148
+RS N + + +I +A+ L +E+I + D + YNSII C GR +
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLY 298
Query: 149 LFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVG 208
+ FD ++ S+ C P++ TY N+L+ F K + + L ++M G
Sbjct: 299 DAKKTFD----LMASKGCFPNVVTY----NTLISGFCKFRM----VDEGMKLFQRMSCEG 346
Query: 209 VIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGL 268
D F N +I Y + ++ A+ +F M P+ ++ + GLC G + L
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESAL 406
Query: 269 GFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGL 328
+ +M+E Y I++ L + E A E+ + PD TY ++ GL
Sbjct: 407 VKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466
Query: 329 CRERRADEAFDLLDECKKRDI 349
C+ EA +L+ K+ I
Sbjct: 467 CKNGPRREADELIRRMKEEGI 487
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 8/195 (4%)
Query: 169 DLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLE 228
DL ++T+L + R C A+ L K MK +G P ++ +
Sbjct: 105 DLYSFTILIHCFCR-------CSRLSFALSVLGKMMK-LGYEPSIVTFGSLLHGFCLVNR 156
Query: 229 VDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVI 288
+ +A + M G EPN Y+ + GLC+ G +N L EM++K L TY
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216
Query: 289 IVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRD 348
++ L R+ DA +L DM+ S +PD +T+ +++ ++ DEA +L E +
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276
Query: 349 ISMSEKMYKTLLDDL 363
+ + Y ++++ L
Sbjct: 277 VDPNNVTYNSIINGL 291
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/295 (19%), Positives = 130/295 (44%), Gaps = 16/295 (5%)
Query: 52 FETWVNHLKPGFTPSDV-----DRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIK 106
F + +K G+ P+ V L + ++AL++ +++ + Y T++
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLN-EMEKKGLGADVVTYNTLLT 219
Query: 107 QLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDC 166
L R+ A ++ +++ + + + + ++I + L A ++Y +M++S
Sbjct: 220 GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNL-DEAQELYKEMIQSS-V 277
Query: 167 KPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKC 226
P+ TY + N L + L+ + M + G P+ N +I + K
Sbjct: 278 DPNNVTYNSIINGL--------CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKF 329
Query: 227 LEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTY 286
VDE +++F M G + ++Y+ + G C+ G++ L + M + + P T+
Sbjct: 330 RMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITH 389
Query: 287 VIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLL 341
I++ L ++ E A+ DM + + + Y ++ GLC+ + ++A++L
Sbjct: 390 CILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELF 444
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 142 FC-CGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVY-LHAVRS 199
FC C R S A V KM+ K E + + SLL F C V + S
Sbjct: 116 FCRCSR---LSFALSVLGKMM-----KLGYEPSIVTFGSLLHGF-----CLVNRIGDAFS 162
Query: 200 LTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLC 259
L M G P+ V N +I K E++ A+ + +EM G + +Y+ + GLC
Sbjct: 163 LVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222
Query: 260 EKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHL 319
GR + ++M ++ + P T+ ++ ++A E+ +M+ +S P+++
Sbjct: 223 YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282
Query: 320 TYKTVLEGLCRERR---ADEAFDLL 341
TY +++ GLC R A + FDL+
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLM 307
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 13/214 (6%)
Query: 150 FSRAFDVYNKMLRSEDCKPDLETYTLLYNSL--LRRFNKLHVCYVYLHAVRSLTKQMKAV 207
F AF ++ +M+ S+ P + +T L + LRR+ V +++M+
Sbjct: 52 FEDAFALFFEMVHSQPL-PSIVDFTRLLTATANLRRY----------ETVIYFSQKMELY 100
Query: 208 GVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQG 267
G+ D + ++I + +C + A+ V +M G EP+ ++ + G C R+
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160
Query: 268 LGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEG 327
M + P+ Y ++ L + A+E+L +M D +TY T+L G
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220
Query: 328 LCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
LC R +A +L + KR I+ + L+D
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALID 254
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 116/280 (41%), Gaps = 17/280 (6%)
Query: 91 QRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCC--GRKF 148
+ Y + Y T+I L A L+ E+ + YN+++ C GR
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR-- 226
Query: 149 LFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVG 208
+S A + M++ PD+ T+T L + +++ N L + L K+M
Sbjct: 227 -WSDAARMLRDMMK-RSINPDVVTFTALIDVFVKQGN--------LDEAQELYKEMIQSS 276
Query: 209 VIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGL 268
V P+ N II + +A + F M GC PN +Y+ + G C+ V++G+
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGM 336
Query: 269 GFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGL 328
++ M + TY ++ + A+++ M+ +PD +T+ +L GL
Sbjct: 337 KLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396
Query: 329 CRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCR 368
C + A D+ ++ + + Y + +H +C+
Sbjct: 397 CVNGEIESALVKFDDMRESEKYIGIVAYNIM---IHGLCK 433
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 82/181 (45%), Gaps = 5/181 (2%)
Query: 193 YLHAVR-----SLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPN 247
+LH++R +L +M +P ++ A + + I +M LYG +
Sbjct: 46 FLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHD 105
Query: 248 AYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLF 307
YS++ + C R++ L +M + PS T+ ++ + R DA ++
Sbjct: 106 LYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI 165
Query: 308 DMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVC 367
M+ + P+ + Y T+++GLC+ + A +LL+E +K+ + Y TLL L Y
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG 225
Query: 368 R 368
R
Sbjct: 226 R 226
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 129/306 (42%), Gaps = 14/306 (4%)
Query: 58 HLKPGFTPSDVDRALTSVSDPDLALDIFRWTAQQRSY--NHTDLNYLTIIKQLNAGRRYQ 115
H +P + D R LT+ ++ + ++ + Y +H ++ +I R
Sbjct: 64 HSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLS 123
Query: 116 QAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTL 175
A +++ +++ + SI + S++ C L +R D ++ ++ K E +
Sbjct: 124 FALSVLGKMMKLGYEPSIVTFGSLLHGFC----LVNRIGDAFSLVILM--VKSGYEPNVV 177
Query: 176 LYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRV 235
+YN+L+ K L+ L +M+ G+ D N ++ +A R+
Sbjct: 178 VYNTLIDGLCK----NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 236 FHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAM 295
+M P+ +++ + ++G +++ YKEM + + P+ TY I+ L M
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM 293
Query: 296 DRRFEDAIEVLFDMLGNSRS-PDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEK 354
R DA + FD++ + P+ +TY T++ G C+ R DE L +
Sbjct: 294 HGRLYDAKKT-FDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352
Query: 355 MYKTLL 360
Y TL+
Sbjct: 353 TYNTLI 358
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 12/176 (6%)
Query: 200 LTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLC 259
L K + G+ P N +I Y K + EA ++ + LYG P+ SY+ +
Sbjct: 490 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 549
Query: 260 EKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAM------------DRRFEDAIEVLF 307
G +EMK + + P+ TY +I L +R FE + L
Sbjct: 550 NCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLR 609
Query: 308 DMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
DM PD +TY T+++ LCR + AF L+ K R++ S Y L+D L
Sbjct: 610 DMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSL 665
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 99/209 (47%), Gaps = 9/209 (4%)
Query: 161 LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMII 220
LR+ + K D+ + +NS++ + KL ++ +S + G++P + N++I
Sbjct: 210 LRTSEWK-DIGPSVVSFNSIMSGYCKLG----FVDMAKSFFCTVLKCGLVPSVYSHNILI 264
Query: 221 KAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLR 280
+ EA+ + +M +G EP++ +Y+ +A+G G ++ ++M +K L
Sbjct: 265 NGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLS 324
Query: 281 PSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTV-LEGLCRERRADEAFD 339
P TY I++C + + +L DML + + +V L GLC+ R DEA
Sbjct: 325 PDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALS 384
Query: 340 LLDECKKRDISMSEKMYKTLLDDLHYVCR 368
L ++ K +S Y + +H +C+
Sbjct: 385 LFNQMKADGLSPDLVAYSIV---IHGLCK 410
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 132/327 (40%), Gaps = 29/327 (8%)
Query: 51 QFETWVNHLKPGFTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNA 110
F V+ L+ +D ++ SD L++ F+ ++ H+ + L + L
Sbjct: 39 HFRGLVSELRHVHVEEIMDELMSESSD--LSVWFFKELRDIYAFRHSSFSTLLVSHVLAG 96
Query: 111 GRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCK-PD 169
RR+++ + ++E+++ +G+ + S FL SR V + + + K +
Sbjct: 97 QRRFKELQVILEQLLQE--EGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQN 154
Query: 170 LETYTLLYNSLLRRF---NKLHVCY---------VYLHAVRSLTKQMKAVGVI------- 210
L T YNS+L F +K+ Y Y V L +Q K +
Sbjct: 155 LNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSE 214
Query: 211 -----PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVN 265
P N I+ Y K VD A F + G P+ YS++ + GLC G +
Sbjct: 215 WKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIA 274
Query: 266 QGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVL 325
+ L +M + + P + TY I+ + A EV+ DML SPD +TY +L
Sbjct: 275 EALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILL 334
Query: 326 EGLCRERRADEAFDLLDECKKRDISMS 352
G C+ D LL + R ++
Sbjct: 335 CGQCQLGNIDMGLVLLKDMLSRGFELN 361
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 105/212 (49%), Gaps = 8/212 (3%)
Query: 149 LFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVG 208
+ S A++V ML + PD+ TYT+L + N + + V L + L++ +
Sbjct: 307 MISGAWEVIRDML-DKGLSPDVITYTILLCGQCQLGN-IDMGLVLLKDM--LSRGFELNS 362
Query: 209 VIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGL 268
+IP + +L+ + K +DEA+ +F++M G P+ +YS + GLC+ G+ + L
Sbjct: 363 IIPCSVMLSGLCKTG----RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 418
Query: 269 GFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGL 328
Y EM +K + P++ T+ ++ L +A +L ++ + + D + Y V++G
Sbjct: 419 WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGY 478
Query: 329 CRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
+ +EA +L + I+ S + +L+
Sbjct: 479 AKSGCIEEALELFKVVIETGITPSVATFNSLI 510
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 92/202 (45%), Gaps = 5/202 (2%)
Query: 161 LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMII 220
L S+ K +E ++ YN L + F+ L + +R + + G+ PD +++
Sbjct: 279 LASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDK----GLSPDVITYTILL 334
Query: 221 KAYSKCLEVDEAIRVFHEMGLYGCEPNAY-SYSYIARGLCEKGRVNQGLGFYKEMKEKCL 279
+ +D + + +M G E N+ S + GLC+ GR+++ L + +MK L
Sbjct: 335 CGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGL 394
Query: 280 RPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFD 339
P Y I++ L +F+ A+ + +M P+ T+ +L GLC++ EA
Sbjct: 395 SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARS 454
Query: 340 LLDECKKRDISMSEKMYKTLLD 361
LLD ++ +Y ++D
Sbjct: 455 LLDSLISSGETLDIVLYNIVID 476
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 114/268 (42%), Gaps = 25/268 (9%)
Query: 113 RYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLET 172
R +A +L ++ A + Y+ +I C + F A +Y++M + P+ T
Sbjct: 378 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLC-KLGKFDMALWLYDEMC-DKRILPNSRT 435
Query: 173 YTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEA 232
+ L L ++ L RSL + + G D + N++I Y+K ++EA
Sbjct: 436 HGALLLGLCQKG--------MLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 233 IRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCS 292
+ +F + G P+ +++ + G C+ + + +K L PS +Y ++ +
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Query: 293 LAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDE-----CKK- 346
A + E+ +M P ++TY + +GLCR + + +L E CK+
Sbjct: 548 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG 607
Query: 347 -RD-----ISMSEKMYKTLLDDLHYVCR 368
RD I + Y T+ + Y+CR
Sbjct: 608 LRDMESEGIPPDQITYNTI---IQYLCR 632
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 110/268 (41%), Gaps = 29/268 (10%)
Query: 115 QQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFS--RAFDVYNKMLRSEDCKPDLET 172
++A L + VI S+ +NS+I C + + + DV ++ P + +
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDV----IKLYGLAPSVVS 540
Query: 173 YTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEA 232
YT L ++ N ++ L ++MKA G+ P ++I K + + +
Sbjct: 541 YTTLMDAYANCGNT--------KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENC 592
Query: 233 IRVFHE------------MGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLR 280
V E M G P+ +Y+ I + LC ++ F + MK + L
Sbjct: 593 NHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLD 652
Query: 281 PSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDL 340
S++TY I++ SL + A ++ + + S Y T+++ C + + A L
Sbjct: 653 ASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKL 712
Query: 341 LDECKKRDISMSEKMYKTLLDDLHYVCR 368
+ R ++S + Y +++ L CR
Sbjct: 713 FHQLLHRGFNVSIRDYSAVINRL---CR 737
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 80/159 (50%)
Query: 202 KQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEK 261
K+MK G+ P+ + +I K + +A R HEM PN ++S + ++
Sbjct: 72 KRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKR 131
Query: 262 GRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTY 321
G++++ YK M + + P+ TY ++ L M R ++AI++L M+ +P+ +TY
Sbjct: 132 GKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTY 191
Query: 322 KTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
T+ G + R D+ LLD+ +R ++ + TL+
Sbjct: 192 STLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLI 230
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 8/193 (4%)
Query: 167 KPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKC 226
+PD+ T + L N + YV QM+ +G+ D V ++I K
Sbjct: 10 EPDIVTASSLVNGFCLSNSIKDAVYV--------AGQMEKMGIKRDVVVDTILIDTLCKN 61
Query: 227 LEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTY 286
V A+ V M G PN +YS + GLC+ GR+ EM K + P+ T+
Sbjct: 62 RLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITF 121
Query: 287 VIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKK 346
++ + A + V M+ S P+ TY +++ GLC R DEA +LD
Sbjct: 122 SALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMIS 181
Query: 347 RDISMSEKMYKTL 359
+ + + Y TL
Sbjct: 182 KGCTPNVVTYSTL 194
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 126/284 (44%), Gaps = 11/284 (3%)
Query: 81 ALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSII 140
AL++ + + R + + Y ++I L R AE + E+ + + ++ ++++I
Sbjct: 67 ALEVLKRM-KDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALI 125
Query: 141 RFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSL 200
R L S+ VY KM+ P++ TY+ L L N++ A++ L
Sbjct: 126 DAYAKRGKL-SKVDSVY-KMMIQMSIDPNVFTYSSLIYGLCMH-NRVD------EAIKML 176
Query: 201 TKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCE 260
M + G P+ + + + K VD+ I++ +M G N S + + +G +
Sbjct: 177 -DLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQ 235
Query: 261 KGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLT 320
G+++ LG + M L P+ +Y I++ L + E A+ M D +T
Sbjct: 236 AGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIIT 295
Query: 321 YKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLH 364
Y ++ G+C+ EA+DL + K + + K Y ++ +L+
Sbjct: 296 YTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELN 339
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 56/119 (47%)
Query: 243 GCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDA 302
G EP+ + S + G C + + +M++ ++ I++ +L +R A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 303 IEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
+EVL M SP+ +TY +++ GLC+ R +A L E + I+ + + L+D
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALID 126
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 132/323 (40%), Gaps = 30/323 (9%)
Query: 66 SDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVI 125
+D+ DP AL + AQ + ++II L R +AE L EE+
Sbjct: 273 NDIIMGFAKSGDPSKALQLLG-MAQATGLSAKTATLVSIISALADSGRTLEAEALFEELR 331
Query: 126 AGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLR--R 183
YN++++ L A + ++M PD TY+LL ++ + R
Sbjct: 332 QSGIKPRTRAYNALLKGYVKTGPL-KDAESMVSEM-EKRGVSPDEHTYSLLIDAYVNAGR 389
Query: 184 FNKLHVCYVYLHA-------------------------VRSLTKQMKAVGVIPDTFVLNM 218
+ + + A + K+MK++GV PD N+
Sbjct: 390 WESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNV 449
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
+I + K +D A+ F M G EP+ +++ + C+ GR ++ M+ +
Sbjct: 450 VIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRG 509
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
P +TY I++ S R++D +L M P+ +T+ T+++ + R ++A
Sbjct: 510 CLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAI 569
Query: 339 DLLDECKKRDISMSEKMYKTLLD 361
+ L+E K + S MY L++
Sbjct: 570 ECLEEMKSVGLKPSSTMYNALIN 592
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 18/199 (9%)
Query: 136 YNSIIRFCC--GRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSL--LRRFNKLHVCY 191
+N++I C GR + F+ + C P TY ++ NS R++ +
Sbjct: 482 WNTLIDCHCKHGRHIVAEEMFEAMER----RGCLPCATTYNIMINSYGDQERWDDM---- 533
Query: 192 VYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSY 251
+ L +MK+ G++P+ ++ Y K ++AI EM G +P++ Y
Sbjct: 534 ------KRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMY 587
Query: 252 SYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLG 311
+ + ++G Q + ++ M L+PS ++ + DRR +A VL M
Sbjct: 588 NALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKE 647
Query: 312 NSRSPDHLTYKTVLEGLCR 330
N PD +TY T+++ L R
Sbjct: 648 NGVKPDVVTYTTLMKALIR 666
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 111/268 (41%), Gaps = 22/268 (8%)
Query: 104 IIKQLNAGRR----YQQAETLVEEVIAGACDGSIPLYNSII----RFCCGRKFLFSRAFD 155
+ +L AG R +Q+ +++E+ + YN +I +F C A
Sbjct: 411 VFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNC-----LDHAMT 465
Query: 156 VYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFV 215
+++ML SE +PD T+ L + H + + + M+ G +P
Sbjct: 466 TFDRML-SEGIEPDRVTWNTLIDC--------HCKHGRHIVAEEMFEAMERRGCLPCATT 516
Query: 216 LNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMK 275
N++I +Y D+ R+ +M G PN +++ + + GR N + +EMK
Sbjct: 517 YNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMK 576
Query: 276 EKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRAD 335
L+PS++ Y ++ + A E A+ M + P L +++ +RR
Sbjct: 577 SVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDA 636
Query: 336 EAFDLLDECKKRDISMSEKMYKTLLDDL 363
EAF +L K+ + Y TL+ L
Sbjct: 637 EAFAVLQYMKENGVKPDVVTYTTLMKAL 664
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 119/282 (42%), Gaps = 15/282 (5%)
Query: 80 LALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPL-YNS 138
LA + W + +L Y +I L GR +E L E + PL YN+
Sbjct: 149 LAYAVVSWLQKHNLCFSYELLYSILIHAL--GR----SEKLYEAFLLSQKQTLTPLTYNA 202
Query: 139 IIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVR 198
+I C R +A ++ KM R + + D Y+L+ SL R NK+ +
Sbjct: 203 LIG-ACARNNDIEKALNLIAKM-RQDGYQSDFVNYSLVIQSLTRS-NKIDSVMLL----- 254
Query: 199 SLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGL 258
L K+++ + D ++N II ++K + +A+++ G + I L
Sbjct: 255 RLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISAL 314
Query: 259 CEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDH 318
+ GR + ++E+++ ++P T Y ++ +DA ++ +M SPD
Sbjct: 315 ADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDE 374
Query: 319 LTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
TY +++ R + A +L E + D+ + ++ LL
Sbjct: 375 HTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLL 416
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 74/159 (46%), Gaps = 12/159 (7%)
Query: 161 LRSEDCKPDLETYTLLYNSLLR--RFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
++S+ P++ T+T L + + RFN C ++MK+VG+ P + + N
Sbjct: 540 MKSQGILPNVVTHTTLVDVYGKSGRFNDAIECL----------EEMKSVGLKPSSTMYNA 589
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
+I AY++ ++A+ F M G +P+ + + + E R + + MKE
Sbjct: 590 LINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENG 649
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPD 317
++P TY ++ +L +F+ V +M+ + PD
Sbjct: 650 VKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 688
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 12/218 (5%)
Query: 156 VYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFV 215
++ +M C P++ +Y +L + R + + ++MK GV+ D
Sbjct: 267 IWREMEEEVGCSPNVYSYNVLMEAYCARG--------LMSEAEKVWEEMKVRGVVYDIVA 318
Query: 216 LNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMK 275
N +I EV +A +F +MGL G E +Y ++ G C+ G V+ GL Y+EMK
Sbjct: 319 YNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMK 378
Query: 276 EKCLRPSTSTYVIIVCSLAMDR---RFEDAIEVLFDMLGNSR-SPDHLTYKTVLEGLCRE 331
K T +V L DR R +A +++ D + + P Y+ +++ LC +
Sbjct: 379 RKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCED 438
Query: 332 RRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCRE 369
+ D A ++ E + S++ Y+ +D V E
Sbjct: 439 GKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDE 476
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 136/333 (40%), Gaps = 28/333 (8%)
Query: 59 LKP-GFTPSDVDR-ALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQ 116
L+P GFTPS L ++P L+L F +T + +H + T+I L+ R
Sbjct: 64 LQPSGFTPSQFSEITLCLRNNPHLSLRFFLFTRRYSLCSHDTHSCSTLIHILSRSRLKSH 123
Query: 117 AETLVEEVIAGAC-----DGSIPLYNSIIRF---CCGRKFLF---------SRAFD---V 156
A ++ + A D + ++ S+I+ C F+F S+ D +
Sbjct: 124 ASEIIRLALRLAATDEDEDRVLKVFRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVM 183
Query: 157 YNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVR----SLTKQMKAVGVI-P 211
+ LRS + T L + RR + +Y S+ + K +G I P
Sbjct: 184 VMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKP 243
Query: 212 DTFVLNMIIKAYSKCLEVDEAIRVFHEMGL-YGCEPNAYSYSYIARGLCEKGRVNQGLGF 270
+ N ++ ++ + E + R++ EM GC PN YSY+ + C +G +++
Sbjct: 244 NATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKV 303
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
++EMK + + Y ++ L + A E+ DM LTY+ ++ G C+
Sbjct: 304 WEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCK 363
Query: 331 ERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
D + E K++ + L++ L
Sbjct: 364 AGDVDSGLVVYREMKRKGFEADGLTIEALVEGL 396
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 129/298 (43%), Gaps = 20/298 (6%)
Query: 53 ETWVNHLKPGFTPSDVDRAL--TSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNA 110
E +N L+ T V R L TS S D +L F W SY T + Y + K L +
Sbjct: 65 ERSLNSLRLPVTSEFVFRVLRATSRSSND-SLRFFNWARSNPSYTPTSMEYEELAKSLAS 123
Query: 111 GRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCC---GRKFLFSRAFDVYNKMLRSEDCK 167
++Y+ +++++ D S+ + + F G+ +A +++N + ++ C+
Sbjct: 124 HKKYESMWKILKQMK----DLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQ 179
Query: 168 PDLETYTLLYNSLLRRFNKLHVCYVYL-HAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKC 226
++ +YNSLL +C V + H +L ++M G+ PD +++ +
Sbjct: 180 QTVD----VYNSLLHA-----LCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSA 230
Query: 227 LEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTY 286
++ EA EM G P A + GL G + +M + P T+
Sbjct: 231 GKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTF 290
Query: 287 VIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDEC 344
I++ +++ E IE+ + D TYKT++ + + + DEAF LL+ C
Sbjct: 291 NILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNC 348
>AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1918242-1919273 REVERSE
LENGTH=343
Length = 343
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 132 SIP--LYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHV 189
S+P +Y+S++ +C +F + + LRS C P+ +T+ LL ++ L R
Sbjct: 96 SLPKIVYSSLLTYCLQSSDPLPLSFAILQRTLRS-GCLPNPQTHLLLSDAWLERRRGSQ- 153
Query: 190 CYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAY 249
+V + +MK +G PDT N ++ + ++DEAI+V EM GC P+
Sbjct: 154 ------SVADIINEMKLIGYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMSAAGCIPDVE 207
Query: 250 SYSYIARGLCEKGRVNQGLGFYKEMKEKC-LRPSTSTYVIIVCSLAMDRRFEDAIEVLFD 308
SY + LC + + KEM K + P + +L +R AIE++
Sbjct: 208 SYGAVINSLCLARKTTDVVKIVKEMVSKAGISPRKGMLTKVAAALRANREIWKAIEMIEF 267
Query: 309 MLGNSRSPDHLTYKTVLEGLCRERR 333
+ + +Y+ V+EG C E R
Sbjct: 268 VESRDYPVEFESYEVVVEG-CLEVR 291
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 126/319 (39%), Gaps = 45/319 (14%)
Query: 80 LALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSI 139
LA F W+ +Q + HT +Y ++K Y+ LV+E++ + +N +
Sbjct: 131 LAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLL 190
Query: 140 IRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRS 199
I CG L +A + K ++ + +P +Y + NSLL + +VY
Sbjct: 191 I-CSCGEAGLAKQAVVQFMKS-KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVY------ 242
Query: 200 LTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIAR--- 256
KQM G PD N+++ + ++D R+F EM G P++Y+Y+ +
Sbjct: 243 --KQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILG 300
Query: 257 --------------------------------GLCEKGRVNQGLGFYKEMKEKCLRPSTS 284
GL G + F EM + RP
Sbjct: 301 KGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVV 360
Query: 285 TYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDEC 344
Y +++ + + A E+ +M + P+ TY +++ GLC EA LL E
Sbjct: 361 CYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEM 420
Query: 345 KKRDISMSEKMYKTLLDDL 363
+ R + + +Y TL+ L
Sbjct: 421 ESRGCNPNFVVYSTLVSYL 439
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 88 TAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSII--RFCCG 145
T R + H+ Y I+ L ++Y+ E + ++++ + YN ++ + G
Sbjct: 212 TFNYRPFKHS---YNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLG 268
Query: 146 RKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMK 205
+ F R FD +M R + PD TY +L + +L + NK L A+ +L MK
Sbjct: 269 KMDRFDRLFD---EMAR-DGFSPDSYTYNILLH-ILGKGNKP------LAALTTLN-HMK 316
Query: 206 AVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVN 265
VG+ P +I S+ ++ EM GC P+ Y+ + G G ++
Sbjct: 317 EVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELD 376
Query: 266 QGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVL 325
+ ++EM K P+ TY ++ L M F +A +L +M +P+ + Y T++
Sbjct: 377 KAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLV 436
Query: 326 EGLCRERRADEAFDLLDECKKRD--ISMSEKMYK 357
L + + EA ++ E K+ + + KM K
Sbjct: 437 SYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMK 470
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 130/302 (43%), Gaps = 14/302 (4%)
Query: 62 GFTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLV 121
G P +D + + ++ ++ ++ N + + L + R Y A + +
Sbjct: 445 GINPPVID----DLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRI 500
Query: 122 EEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLL 181
E+++ C YNS+I+ C ++ + + N +++ D PD++TY ++ N L
Sbjct: 501 EKMVNLGCTPLPFSYNSVIK-CLFQENIIEDLASLVN-IIQELDFVPDVDTYLIVVNELC 558
Query: 182 RRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGL 241
++ ++ A ++ M+ +G+ P + + II + K V EA F +M
Sbjct: 559 KKNDR--------DAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLE 610
Query: 242 YGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFED 301
G +P+ +Y + GR+++ +E+ + LRPS+ TY +++ E
Sbjct: 611 SGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEK 670
Query: 302 AIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
+ L ML + SP+ + Y ++ ++ +F L + DI Y TLL
Sbjct: 671 GCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLS 730
Query: 362 DL 363
L
Sbjct: 731 GL 732
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 129/303 (42%), Gaps = 46/303 (15%)
Query: 98 DLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVY 157
++ Y+ +I R +A LVEEV+ S Y +I + + +
Sbjct: 617 EIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFV-KMGMMEKGCQYL 675
Query: 158 NKMLRSEDCKPDLETYTLLYNSLLRR---------FNKL--------HVCYVYLHAV--R 198
+KML + P++ YT L L++ F + H+ Y+ L + R
Sbjct: 676 DKMLE-DGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWR 734
Query: 199 SLTKQMK-AVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCE------------ 245
++ ++ K V V P K + + + + +G YG +
Sbjct: 735 AMARKKKRQVIVEPGKE------KLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKK 788
Query: 246 ---PNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDA 302
PN Y ++ I G C GR+++ + M+++ + P+ TY I++ S E A
Sbjct: 789 SIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESA 848
Query: 303 IEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDD 362
I+ LF+ G + PD + Y T+L+GLC +R +A L+ E +K I+ ++ Y+ LL
Sbjct: 849 ID-LFE--GTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQC 905
Query: 363 LHY 365
L Y
Sbjct: 906 LCY 908
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Query: 202 KQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEK 261
+ M+ G++P+ +++K++ + +++ AI +F CEP+ YS + +GLC+
Sbjct: 818 ESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGTN---CEPDQVMYSTLLKGLCDF 874
Query: 262 GRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTY 321
R L EM++ + P+ +Y ++ L R +A++V+ DM P + +
Sbjct: 875 KRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINH 934
Query: 322 KTVLEGLCRERRADEA 337
++ LC E++ EA
Sbjct: 935 TWLIYILCEEKKLREA 950
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 3/141 (2%)
Query: 209 VIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGL 268
+IP+ ++ N II Y +DEA M G PN +Y+ + + E G + +
Sbjct: 790 IIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAI 849
Query: 269 GFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGL 328
++ C P Y ++ L +R DA+ ++ +M + +P+ +Y+ +L+ L
Sbjct: 850 DLFE--GTNC-EPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCL 906
Query: 329 CRERRADEAFDLLDECKKRDI 349
C R EA ++ + DI
Sbjct: 907 CYSRLTMEAVKVVKDMAALDI 927
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 110/250 (44%), Gaps = 10/250 (4%)
Query: 81 ALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSII 140
AL++F +Q Y + Y+ ++ L + +A+ L +E++ + ++ LY +++
Sbjct: 107 ALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALL 166
Query: 141 RFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSL 200
R L AF + +KM C+PD+ TY+ L K V V SL
Sbjct: 167 A-AYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLL--------KACVDASQFDLVDSL 217
Query: 201 TKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGL-YGCEPNAYSYSYIARGLC 259
K+M + P+T N+++ Y + D+ +V +M + C+P+ ++ + I
Sbjct: 218 YKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFG 277
Query: 260 EKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHL 319
G+++ +Y++ + + P T T+ I++ S R ++ V+ M
Sbjct: 278 NMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTS 337
Query: 320 TYKTVLEGLC 329
TY ++E
Sbjct: 338 TYNNIIEAFA 347
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 141/350 (40%), Gaps = 60/350 (17%)
Query: 55 WVNHLKPGFTPSD-----VDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLN 109
WV H + +TPS V R + D+A +F +QR+ Y T+I
Sbjct: 144 WV-HEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFD-EMRQRALAPDRYTYSTLITSFG 201
Query: 110 AGRRYQQAETLVEEVIAGACDGSIPLYNSII----RFCCGRKFLFSRAFDVYNKMLRSED 165
+ A + ++++ G + LY+++I R C +S+A +++++ RS
Sbjct: 202 KEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCD-----YSKAISIFSRLKRS-G 255
Query: 166 CKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSK 225
PDL + YNS++ + K + R L K+M GV+P+T + ++ Y +
Sbjct: 256 ITPDL----VAYNSMINVYGKAKL----FREARLLIKEMNEAGVLPNTVSYSTLLSVYVE 307
Query: 226 CLEVDEAIRVFHEMGLYGC-----------------------------------EPNAYS 250
+ EA+ VF EM C EPN S
Sbjct: 308 NHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVS 367
Query: 251 YSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDML 310
Y+ I R E + + ++ M+ K + + TY ++ E A ++ +M
Sbjct: 368 YNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQ 427
Query: 311 GNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
P+ +TY T++ + + D A L + + + + + +Y+T++
Sbjct: 428 SRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMI 477
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 114/259 (44%), Gaps = 27/259 (10%)
Query: 100 NYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRK-------FLFSR 152
Y+ + +Q R + L E ++ G SI + ++R+ G F SR
Sbjct: 300 TYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSR 359
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSL--LRRFNKLHVCYVYLHAVRSLTKQMKAVGVI 210
++ K L Y ++ SL + RF++ +TK M+ G
Sbjct: 360 KYESTGKSLSKA-------VYDGIHRSLTSVGRFDE----------AEEITKAMRNAGYE 402
Query: 211 PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGF 270
PD + ++ K ++EA V +M GC P+ +++ + +G C+ +++ L
Sbjct: 403 PDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALAC 462
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSR-SPDHLTYKTVLEGLC 329
+ M EK ++ +++ + +FE A L +M+ N+ P TYK +++ L
Sbjct: 463 FANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLL 522
Query: 330 RERRADEAFDLLDECKKRD 348
+ ++++EA DLL KK++
Sbjct: 523 KIKKSEEALDLLQMMKKQN 541
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 69/167 (41%), Gaps = 34/167 (20%)
Query: 195 HAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYI 254
H L Q+K +PD I++AY+ + E ++VF M G PNAY+YS +
Sbjct: 214 HEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVL 273
Query: 255 ARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSR 314
+GL G+ ++ DA + L +M+GN
Sbjct: 274 IKGLAADGKTHK----------------------------------DAKKYLLEMMGNGM 299
Query: 315 SPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
SP+ TY V E RE + + A +LL E K + EK + L+
Sbjct: 300 SPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEKAVREALE 346
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 89/170 (52%), Gaps = 2/170 (1%)
Query: 192 VYLH-AVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYS 250
++LH V SL +M+++ + P ++ + Y+ + D+A+++F M +GC + S
Sbjct: 104 LHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLAS 163
Query: 251 YSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDML 310
++ I LC+ RV + ++ ++ + T TY +I+ + +R A+EVL +M+
Sbjct: 164 FNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMV 222
Query: 311 GNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
+P+ TY T+L+G R + A++ E KKRD + Y T++
Sbjct: 223 ERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVV 272
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 124/259 (47%), Gaps = 18/259 (6%)
Query: 81 ALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSII 140
A ++FR A + ++ + Y I+ +R +A +++E++ + ++ YN+++
Sbjct: 180 AYELFR--ALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTML 237
Query: 141 R--FCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVR 198
+ F G+ A++ + +M + DC+ D+ TYT + + + R
Sbjct: 238 KGFFRAGQ---IRHAWEFFLEM-KKRDCEIDVVTYTTVVHGF--------GVAGEIKRAR 285
Query: 199 SLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGL 258
++ +M GV+P N +I+ K V+ A+ +F EM G EPN +Y+ + RGL
Sbjct: 286 NVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGL 345
Query: 259 CEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRS-PD 317
G ++G + M+ + P+ TY +++ + E A+ LF+ +G+ P+
Sbjct: 346 FHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALG-LFEKMGSGDCLPN 404
Query: 318 HLTYKTVLEGLCRERRADE 336
TY ++ G+ +R+++
Sbjct: 405 LDTYNILISGMFVRKRSED 423
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 90/213 (42%), Gaps = 10/213 (4%)
Query: 91 QRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLF 150
+R N Y T++K + + A E+ C+ + Y +++ G
Sbjct: 223 ERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVH-GFGVAGEI 281
Query: 151 SRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVI 210
RA +V+++M+R E P + TY + L ++ N + ++ VR G
Sbjct: 282 KRARNVFDEMIR-EGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRR--------GYE 332
Query: 211 PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGF 270
P+ N++I+ E + M GCEPN +Y+ + R E V + LG
Sbjct: 333 PNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGL 392
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAI 303
+++M P+ TY I++ + + +R ED +
Sbjct: 393 FEKMGSGDCLPNLDTYNILISGMFVRKRSEDMV 425
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 66/155 (42%)
Query: 212 DTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFY 271
DT N+I+ + +A+ V EM G PN +Y+ + +G G++ F+
Sbjct: 194 DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFF 253
Query: 272 KEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRE 331
EMK++ TY +V + + A V +M+ P TY +++ LC++
Sbjct: 254 LEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKK 313
Query: 332 RRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYV 366
+ A + +E +R + Y L+ L +
Sbjct: 314 DNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHA 348
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 90/203 (44%), Gaps = 15/203 (7%)
Query: 128 ACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNS--LLRRFN 185
C + +N+I+ C K + +A++++ + LR D TY ++ N L++R
Sbjct: 156 GCFQDLASFNTILDVLCKSKRV-EKAYELF-RALRGR-FSVDTVTYNVILNGWCLIKRTP 212
Query: 186 KLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCE 245
K + K+M G+ P+ N ++K + + ++ A F EM CE
Sbjct: 213 K----------ALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCE 262
Query: 246 PNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEV 305
+ +Y+ + G G + + + EM + + PS +TY ++ L E+A+ +
Sbjct: 263 IDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVM 322
Query: 306 LFDMLGNSRSPDHLTYKTVLEGL 328
+M+ P+ TY ++ GL
Sbjct: 323 FEEMVRRGYEPNVTTYNVLIRGL 345
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 113/292 (38%), Gaps = 14/292 (4%)
Query: 73 TSVSDPDLALDIFRWTAQQRSYNHTDL-NYLTIIKQLNAGRRYQQAETLVEEVIAGACDG 131
S PD A+ +F + + DL ++ TI+ L +R ++A L + G
Sbjct: 137 ASAGKPDKAVKLFLNMHEHGCFQ--DLASFNTILDVLCKSKRVEKAYELFR-ALRGRFSV 193
Query: 132 SIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCY 191
YN I+ C K +A +V +M+ P+L TY + R H
Sbjct: 194 DTVTYNVILNGWCLIKRT-PKALEVLKEMV-ERGINPNLTTYNTMLKGFFRAGQIRHAWE 251
Query: 192 VYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSY 251
+L +MK D ++ + E+ A VF EM G P+ +Y
Sbjct: 252 FFL--------EMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATY 303
Query: 252 SYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLG 311
+ + + LC+K V + ++EM + P+ +TY +++ L F E++ M
Sbjct: 304 NAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMEN 363
Query: 312 NSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
P+ TY ++ ++A L ++ D + Y L+ +
Sbjct: 364 EGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 110/244 (45%), Gaps = 9/244 (3%)
Query: 117 AETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLL 176
A+ + E AG ++ ++++I GR L A V+N M + +P+L TY
Sbjct: 252 AKRIFETAFAGGYGNTVYAFSALIS-AYGRSGLHEEAISVFNSM-KEYGLRPNLVTY--- 306
Query: 177 YNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVF 236
N+++ K + + V +M+ GV PD N ++ S+ + A +F
Sbjct: 307 -NAVIDACGKGGMEF---KQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLF 362
Query: 237 HEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMD 296
EM E + +SY+ + +C+ G+++ +M K + P+ +Y ++ A
Sbjct: 363 DEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKA 422
Query: 297 RRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMY 356
RF++A+ + +M + D ++Y T+L + R++EA D+L E I Y
Sbjct: 423 GRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTY 482
Query: 357 KTLL 360
LL
Sbjct: 483 NALL 486
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 117/253 (46%), Gaps = 14/253 (5%)
Query: 111 GRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDL 170
G ++ A L +E+ + + YN+++ C + AF++ +M + P++
Sbjct: 352 GGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC-KGGQMDLAFEILAQM-PVKRIMPNV 409
Query: 171 ETYTLLYNSLLR--RFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLE 228
+Y+ + + + RF++ +L +M+ +G+ D N ++ Y+K
Sbjct: 410 VSYSTVIDGFAKAGRFDE----------ALNLFGEMRYLGIALDRVSYNTLLSIYTKVGR 459
Query: 229 VDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVI 288
+EA+ + EM G + + +Y+ + G ++G+ ++ + EMK + + P+ TY
Sbjct: 460 SEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYST 519
Query: 289 IVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRD 348
++ + +++A+E+ + D + Y +++ LC+ A L+DE K
Sbjct: 520 LIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG 579
Query: 349 ISMSEKMYKTLLD 361
IS + Y +++D
Sbjct: 580 ISPNVVTYNSIID 592
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 108/257 (42%), Gaps = 16/257 (6%)
Query: 110 AGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPD 169
G ++Q +E+ +NS++ C R L+ A +++++M
Sbjct: 316 GGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCS-RGGLWEAARNLFDEMTNRR----- 369
Query: 170 LETYTLLYNSLLR---RFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKC 226
+E YN+LL + ++ + + L QM ++P+ + +I ++K
Sbjct: 370 IEQDVFSYNTLLDAICKGGQMDLAFEIL-------AQMPVKRIMPNVVSYSTVIDGFAKA 422
Query: 227 LEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTY 286
DEA+ +F EM G + SY+ + + GR + L +EM ++ TY
Sbjct: 423 GRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTY 482
Query: 287 VIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKK 346
++ ++++ +V +M P+ LTY T+++G + EA ++ E K
Sbjct: 483 NALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKS 542
Query: 347 RDISMSEKMYKTLLDDL 363
+ +Y L+D L
Sbjct: 543 AGLRADVVLYSALIDAL 559
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 4/163 (2%)
Query: 177 YNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVF 236
YN+LL + K+ L +R +M +VG+ D N ++ Y K + DE +VF
Sbjct: 447 YNTLLSIYTKVGRSEEALDILR----EMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 237 HEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMD 296
EM PN +YS + G + G + + ++E K LR Y ++ +L +
Sbjct: 503 TEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKN 562
Query: 297 RRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFD 339
A+ ++ +M SP+ +TY ++++ R D + D
Sbjct: 563 GLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 73/147 (49%), Gaps = 1/147 (0%)
Query: 203 QMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKG 262
+MK V + P N +I + + A+ F E+ G P+ +++ I G C++G
Sbjct: 511 EMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEG 570
Query: 263 RVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYK 322
RV + FY E + +P T I++ L + E A+ F+ L R D +TY
Sbjct: 571 RVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALN-FFNTLIEEREVDTVTYN 629
Query: 323 TVLEGLCRERRADEAFDLLDECKKRDI 349
T++ C++++ EA+DLL E +++ +
Sbjct: 630 TMISAFCKDKKLKEAYDLLSEMEEKGL 656
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 11/202 (5%)
Query: 168 PDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCL 227
PD+ TY L + L+ + L + ++M G+ +T LN I+ A K
Sbjct: 414 PDIVTYHTLIKAYLKVGD--------LSGALEMMREMGQKGIKMNTITLNTILDALCKER 465
Query: 228 EVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYV 287
++DEA + + G + +Y + G + +V + L + EMK+ + P+ ST+
Sbjct: 466 KLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFN 525
Query: 288 IIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKR 347
++ L + E A+E ++ + PD T+ +++ G C+E R ++AF+ +E K
Sbjct: 526 SLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKH 585
Query: 348 DISMSEKMYKTLLDDLHYVCRE 369
LL+ L C+E
Sbjct: 586 SFKPDNYTCNILLNGL---CKE 604
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 128/300 (42%), Gaps = 27/300 (9%)
Query: 62 GFTPSDVD-----RALTSVSDPDLALDIFRWTAQQR-SYNHTDLNYLTIIKQLNAGRRYQ 115
GF+P V +A V D AL++ R Q+ N LN TI+ L R+
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLN--TILDALCKERKLD 468
Query: 116 QAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTL 175
+A L+ Y ++I R+ +A +++++M + P + T+
Sbjct: 469 EAHNLLNSAHKRGFIVDEVTYGTLI-MGFFREEKVEKALEMWDEM-KKVKITPTVSTFNS 526
Query: 176 LYNSLLRRFNKLHVCYVYLHAVRSLT----KQMKAVGVIPDTFVLNMIIKAYSKCLEVDE 231
L L C+ H L ++ G++PD N II Y K V++
Sbjct: 527 LIGGL---------CH---HGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEK 574
Query: 232 AIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVC 291
A ++E + +P+ Y+ + + GLC++G + L F+ + E+ T TY ++
Sbjct: 575 AFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEE-REVDTVTYNTMIS 633
Query: 292 SLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISM 351
+ D++ ++A ++L +M PD TY + + L + + E +LL + + SM
Sbjct: 634 AFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSM 693
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 143/385 (37%), Gaps = 97/385 (25%)
Query: 58 HLKPGFTPSDVDRALTSV---SDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRY 114
HL P + + D AL++ P +AL IF+ + + N LT L RY
Sbjct: 124 HLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLK----LKPNLLTCNTLLIGLVRY 179
Query: 115 ------QQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKP 168
A + ++++ ++ +N ++ C L A + +M+ P
Sbjct: 180 PSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKL-EDALGMLERMVSEFKVNP 238
Query: 169 DLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLE 228
D + YN++L+ +K L ++ L MK G++P+ N ++ Y K
Sbjct: 239 D----NVTYNTILKAMSK----KGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGS 290
Query: 229 VDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVI 288
+ EA ++ M P+ +Y+ + GLC G + +GL MK L+P TY
Sbjct: 291 LKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNT 350
Query: 289 IV-------CSLA----MDRRFEDAIEV---------------------------LFDML 310
++ SL M++ D ++ L DM
Sbjct: 351 LIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMH 410
Query: 311 GNSRSPDHLTY-----------------------------------KTVLEGLCRERRAD 335
G SPD +TY T+L+ LC+ER+ D
Sbjct: 411 G--FSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLD 468
Query: 336 EAFDLLDECKKRDISMSEKMYKTLL 360
EA +LL+ KR + E Y TL+
Sbjct: 469 EAHNLLNSAHKRGFIVDEVTYGTLI 493
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 99/222 (44%), Gaps = 11/222 (4%)
Query: 148 FLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAV 207
F S A +V++ M++ +++T+ +L N KL A+ L + +
Sbjct: 183 FSISSAREVFDDMVKI-GVSLNVQTFNVLVNGYCLE-GKLE------DALGMLERMVSEF 234
Query: 208 GVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQG 267
V PD N I+KA SK + + + +M G PN +Y+ + G C+ G + +
Sbjct: 235 KVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEA 294
Query: 268 LGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEG 327
+ MK+ + P TY I++ L + +E++ M PD +TY T+++G
Sbjct: 295 FQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDG 354
Query: 328 LCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCRE 369
+ EA L+++ + + ++ + L ++C+E
Sbjct: 355 CFELGLSLEARKLMEQMENDGVKANQVTHNI---SLKWLCKE 393
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Query: 208 GVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQG 267
G PD + +IKAY K ++ A+ + EMG G + N + + I LC++ ++++
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEA 470
Query: 268 LGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEG 327
++ TY ++ + + E A+E+ +M +P T+ +++ G
Sbjct: 471 HNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGG 530
Query: 328 LCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCRE 369
LC + + A + DE + + + + +++ L Y C+E
Sbjct: 531 LCHHGKTELAMEKFDELAESGLLPDDSTFNSII--LGY-CKE 569
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 84/162 (51%), Gaps = 2/162 (1%)
Query: 204 MKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYG-CEPNAYSYSYIARGLCEKG 262
M++ G P F+ +KA + ++ EA+ V ++ + G C P Y+ + +GLC+ G
Sbjct: 324 MRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDG 383
Query: 263 RVNQGLGFYKEM-KEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTY 321
+ + +G+ K+M K+ + TY +V L D +F +A +V+ +ML S P TY
Sbjct: 384 KSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETY 443
Query: 322 KTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+++GLC R EA L+E +D+ ++K L + +
Sbjct: 444 HMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESV 485
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 112/259 (43%), Gaps = 26/259 (10%)
Query: 63 FTPSDVDRALTSVSDPDLALDIFRWTAQQR--SYNHTDLNYLTIIKQLNAGRRYQQAETL 120
TPS + + L +P AL +F A++R SY H Y T+I L R + + +
Sbjct: 10 LTPSLLSQILKKQKNPVTALKLFE-EAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYV 68
Query: 121 VEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN-----KMLRSEDCKPDLETYTL 175
+E + +C+ ++ S+IR FSRA + + K L +C ++L
Sbjct: 69 IERMKEDSCECKDSVFASVIR-------TFSRAGRLEDAISLFKSLHEFNCV----NWSL 117
Query: 176 LYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRV 235
+++LL+ K H R K V LN+++K + D A +V
Sbjct: 118 SFDTLLQEMVKESELEAACHIFR---KYCYGWEVNSRITALNLLMKVLCQVNRSDLASQV 174
Query: 236 FHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGL----GFYKEMKEKCLRPSTSTYVIIVC 291
F EM GC P+ SY + +G C +G++ + + + +K Y I++
Sbjct: 175 FQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLD 234
Query: 292 SLAMDRRFEDAIEVLFDML 310
+L +DAIE+L +L
Sbjct: 235 ALCDAGEVDDAIEILGKIL 253
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 3/137 (2%)
Query: 195 HAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMG-LYGCEPNAYSYSY 253
AV + K+M +P V N++IK + EA+ +M C N +Y
Sbjct: 351 EAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQT 410
Query: 254 IARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLA-MDRRFEDAIEVLFDMLGN 312
+ GLC G+ + +EM K P TY +++ L MDRR+E A+ L +M+
Sbjct: 411 LVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYE-AVMWLEEMVSQ 469
Query: 313 SRSPDHLTYKTVLEGLC 329
P+ +K + E +C
Sbjct: 470 DMVPESSVWKALAESVC 486
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 84/162 (51%), Gaps = 2/162 (1%)
Query: 204 MKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYG-CEPNAYSYSYIARGLCEKG 262
M++ G P F+ +KA + ++ EA+ V ++ + G C P Y+ + +GLC+ G
Sbjct: 324 MRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDG 383
Query: 263 RVNQGLGFYKEM-KEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTY 321
+ + +G+ K+M K+ + TY +V L D +F +A +V+ +ML S P TY
Sbjct: 384 KSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETY 443
Query: 322 KTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+++GLC R EA L+E +D+ ++K L + +
Sbjct: 444 HMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESV 485
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 112/259 (43%), Gaps = 26/259 (10%)
Query: 63 FTPSDVDRALTSVSDPDLALDIFRWTAQQR--SYNHTDLNYLTIIKQLNAGRRYQQAETL 120
TPS + + L +P AL +F A++R SY H Y T+I L R + + +
Sbjct: 10 LTPSLLSQILKKQKNPVTALKLFE-EAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYV 68
Query: 121 VEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN-----KMLRSEDCKPDLETYTL 175
+E + +C+ ++ S+IR FSRA + + K L +C ++L
Sbjct: 69 IERMKEDSCECKDSVFASVIR-------TFSRAGRLEDAISLFKSLHEFNCV----NWSL 117
Query: 176 LYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRV 235
+++LL+ K H R K V LN+++K + D A +V
Sbjct: 118 SFDTLLQEMVKESELEAACHIFR---KYCYGWEVNSRITALNLLMKVLCQVNRSDLASQV 174
Query: 236 FHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGL----GFYKEMKEKCLRPSTSTYVIIVC 291
F EM GC P+ SY + +G C +G++ + + + +K Y I++
Sbjct: 175 FQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLD 234
Query: 292 SLAMDRRFEDAIEVLFDML 310
+L +DAIE+L +L
Sbjct: 235 ALCDAGEVDDAIEILGKIL 253
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 3/137 (2%)
Query: 195 HAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMG-LYGCEPNAYSYSY 253
AV + K+M +P V N++IK + EA+ +M C N +Y
Sbjct: 351 EAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQT 410
Query: 254 IARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLA-MDRRFEDAIEVLFDMLGN 312
+ GLC G+ + +EM K P TY +++ L MDRR+E A+ L +M+
Sbjct: 411 LVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYE-AVMWLEEMVSQ 469
Query: 313 SRSPDHLTYKTVLEGLC 329
P+ +K + E +C
Sbjct: 470 DMVPESSVWKALAESVC 486
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 126/289 (43%), Gaps = 14/289 (4%)
Query: 59 LKPGF--TPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDL--NYLTIIKQLNAGRRY 114
+K G+ T + + + + LA D+ + +++N+ +Y I+ L ++Y
Sbjct: 179 IKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQY 238
Query: 115 QQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYT 174
+ + + E+++ + YN I+ F R R + + ++M++ + PDL TY
Sbjct: 239 KLIDWVYEQMLEDGFTPDVLTYN-IVMFANFRLGKTDRLYRLLDEMVK-DGFSPDLYTYN 296
Query: 175 LLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIR 234
+L + L L A +L M+ VGV P +I S+ +++
Sbjct: 297 ILLHHLATGNKPL--------AALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKY 348
Query: 235 VFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLA 294
E GC P+ Y+ + G G + + +KEM EK P+ TY ++
Sbjct: 349 FMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFC 408
Query: 295 MDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDE 343
M +F++A +L +M +P+ + Y T++ L + EA +++ +
Sbjct: 409 MAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKD 457
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 125/321 (38%), Gaps = 49/321 (15%)
Query: 80 LALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSI 139
LA F W Q ++ HT Y ++K Y+ L++E+I + +N +
Sbjct: 134 LAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLL 193
Query: 140 IRFCCGRKFLFSRAFDVYNKMLRSE--DCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAV 197
I CG L A DV + ++S+ + +P +Y + +SLL + +VY
Sbjct: 194 I-CTCGEAGL---ARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVY---- 245
Query: 198 RSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARG 257
+QM G PD N+++ A + + D R+ EM G P+ Y+Y+ +
Sbjct: 246 ----EQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHH 301
Query: 258 LCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIV-----------CSLAMDR--------- 297
L + L M+E + P + ++ C MD
Sbjct: 302 LATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPD 361
Query: 298 ---------------RFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLD 342
E A E+ +M + P+ TY +++ G C + EA LL
Sbjct: 362 VVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLK 421
Query: 343 ECKKRDISMSEKMYKTLLDDL 363
E + R + + +Y TL+++L
Sbjct: 422 EMESRGCNPNFVVYSTLVNNL 442
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 14/133 (10%)
Query: 166 CKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSK 225
C PD+ YT++ ++ L + K+M G +P+ F N +I+ +
Sbjct: 358 CTPDVVCYTVMITG--------YISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCM 409
Query: 226 CLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTST 285
+ EA + EM GC PN YS + L G+V + K+M EK
Sbjct: 410 AGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEK------GH 463
Query: 286 YVIIVCSLAMDRR 298
YV ++ L RR
Sbjct: 464 YVHLISKLKKYRR 476
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 9/198 (4%)
Query: 154 FDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDT 213
+ VY+ M R P+ T+ +L N N V ++M+ G PD
Sbjct: 221 WQVYSVMCRV-GIHPNTYTFNILTNVFCNDSN--------FREVDDFLEKMEEEGFEPDL 271
Query: 214 FVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKE 273
N ++ +Y + + EA ++ M P+ +Y+ + +GLC+ GRV + +
Sbjct: 272 VTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHR 331
Query: 274 MKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERR 333
M ++ ++P +Y ++ + + + + ++L +MLGNS PD T K ++EG RE R
Sbjct: 332 MVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGR 391
Query: 334 ADEAFDLLDECKKRDISM 351
A + + E ++ + +
Sbjct: 392 LLSAVNFVVELRRLKVDI 409
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 90/240 (37%), Gaps = 47/240 (19%)
Query: 167 KPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIP-----------DTFV 215
+P++ Y LL + L+ K + +L + LT + + V V D V
Sbjct: 110 RPNVGNYCLLLHILVSS-KKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDPVV 168
Query: 216 LNMIIKAYSKCLEVDEAIRVFHE-----------------------------------MG 240
+M++K Y K V+E RVF E M
Sbjct: 169 FDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMC 228
Query: 241 LYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFE 300
G PN Y+++ + C + F ++M+E+ P TY +V S R +
Sbjct: 229 RVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLK 288
Query: 301 DAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
+A + M PD +TY ++++GLC++ R EA R I Y TL+
Sbjct: 289 EAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLI 348
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 94/255 (36%), Gaps = 47/255 (18%)
Query: 142 FCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLT 201
FC F R D + + + E +PDL TY L +S RR Y+Y
Sbjct: 246 FCNDSNF---REVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLY-------- 294
Query: 202 KQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEK 261
K M V+PD +IK K V EA + FH M G +P+ SY+ + C++
Sbjct: 295 KIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKE 354
Query: 262 GRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDML----------- 310
G + Q EM + P T +IV + R A+ + ++
Sbjct: 355 GMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVC 414
Query: 311 ----------GNSRSPDHL---------------TYKTVLEGLCRERRADEAFDLLDECK 345
G + HL TY ++E L R +EA L + K
Sbjct: 415 DFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLK 474
Query: 346 KRDISMSEKMYKTLL 360
++ + K Y+ L+
Sbjct: 475 NQNQVLDAKTYRALI 489
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
Query: 174 TLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAI 233
T+ YN ++R F L+ L K+M VG+ PD +I Y ++D+A
Sbjct: 165 TVAYNLVIRLFADKG----DLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAW 220
Query: 234 RVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEK----CLRPSTSTYVII 289
R+ EM + C N+ +YS I G+C+ G + + L EM+++ + P+ TY ++
Sbjct: 221 RLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLV 280
Query: 290 VCSLAMDRRFEDAIEVLFDMLGNSRS-PDHLTYKTVLEGL 328
+ + RR E+A+ VL D +GN P+ +T +++G+
Sbjct: 281 IQAFCEKRRVEEALLVL-DRMGNRGCMPNRVTACVLIQGV 319
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 114/261 (43%), Gaps = 20/261 (7%)
Query: 81 ALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSII 140
AL I +W + + H+ Y + L +++ + + VE + D + L N++
Sbjct: 104 ALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRG---DKLVTL-NTVA 159
Query: 141 RFCCGRKFL----FSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHA 196
+ R+F + A ++++ L + + E+ LL ++L + +
Sbjct: 160 KIM--RRFAGAGEWEEAVGIFDR-LGEFGLEKNTESMNLLLDTLCKEKR--------VEQ 208
Query: 197 VRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIAR 256
R + Q+K+ + P+ N+ I + K V+EA+ EM +G P SY+ I R
Sbjct: 209 ARVVLLQLKS-HITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIR 267
Query: 257 GLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSP 316
C++ + EM+ P++ TY I+ SL + FE+A+ V M + P
Sbjct: 268 CYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKP 327
Query: 317 DHLTYKTVLEGLCRERRADEA 337
D L Y ++ L R R +EA
Sbjct: 328 DSLFYNCLIHTLARAGRLEEA 348
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 117/256 (45%), Gaps = 13/256 (5%)
Query: 111 GRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDL 170
R ++A ++E+ + Y +IIR C ++F F + +++ ++M + P+
Sbjct: 237 ANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYC-QQFEFIKVYEMLSEM-EANGSPPNS 294
Query: 171 ETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVD 230
TYT + +SL + + A+R T+ MK G PD+ N +I ++ ++
Sbjct: 295 ITYTTIMSSL-------NAQKEFEEALRVATR-MKRSGCKPDSLFYNCLIHTLARAGRLE 346
Query: 231 EAIRVFH-EMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCL-RPSTSTYVI 288
EA RVF EM G N +Y+ + C ++ + KEM+ L P TY
Sbjct: 347 EAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQP 406
Query: 289 IVCSLAMDRRFEDAIEVLFDMLGNSR-SPDHLTYKTVLEGLCRERRADEAFDLLDECKKR 347
++ S + ++L +M+ S D TY +++ LCR + A+ L +E +
Sbjct: 407 LLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQ 466
Query: 348 DISMSEKMYKTLLDDL 363
DI+ + LL+++
Sbjct: 467 DITPRHRTCLLLLEEV 482
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 70/156 (44%), Gaps = 1/156 (0%)
Query: 208 GVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQG 267
G+ +T +N+++ K V++A V ++ + PNA++++ G C+ RV +
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNIFIHGWCKANRVEEA 243
Query: 268 LGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEG 327
L +EMK RP +Y I+ F E+L +M N P+ +TY T++
Sbjct: 244 LWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS 303
Query: 328 LCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
L ++ +EA + K+ Y L+ L
Sbjct: 304 LNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTL 339
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 72/146 (49%), Gaps = 1/146 (0%)
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
I++ ++ E +EA+ +F +G +G E N S + + LC++ RV Q ++K
Sbjct: 161 IMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH- 219
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
+ P+ T+ I + R E+A+ + +M G+ P ++Y T++ C++ + +
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 339 DLLDECKKRDISMSEKMYKTLLDDLH 364
++L E + + Y T++ L+
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLN 305
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 104/248 (41%), Gaps = 20/248 (8%)
Query: 87 WTAQQ---RSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFC 143
WT Q+ + ++Y TII+ + + ++ E+ A + Y +I+
Sbjct: 245 WTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSL 304
Query: 144 CGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSL---LRRFNKLHVCYVYLHAVRSL 200
+K F A V +M RS CKPD +L YN L L R +L A R
Sbjct: 305 NAQKE-FEEALRVATRMKRS-GCKPD----SLFYNCLIHTLARAGRLE------EAERVF 352
Query: 201 TKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYG-CEPNAYSYSYIARGLC 259
+M +GV +T N +I Y E D+AI + EM C P+ ++Y + R
Sbjct: 353 RVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCF 412
Query: 260 EKGRVNQGLGFYKEMKEKC-LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDH 318
++G V + KEM K L STY ++ L E A + +M+ +P H
Sbjct: 413 KRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRH 472
Query: 319 LTYKTVLE 326
T +LE
Sbjct: 473 RTCLLLLE 480
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 114/261 (43%), Gaps = 20/261 (7%)
Query: 81 ALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSII 140
AL I +W + + H+ Y + L +++ + + VE + D + L N++
Sbjct: 104 ALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRG---DKLVTL-NTVA 159
Query: 141 RFCCGRKFL----FSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHA 196
+ R+F + A ++++ L + + E+ LL ++L + +
Sbjct: 160 KIM--RRFAGAGEWEEAVGIFDR-LGEFGLEKNTESMNLLLDTLCKEKR--------VEQ 208
Query: 197 VRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIAR 256
R + Q+K+ + P+ N+ I + K V+EA+ EM +G P SY+ I R
Sbjct: 209 ARVVLLQLKS-HITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIR 267
Query: 257 GLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSP 316
C++ + EM+ P++ TY I+ SL + FE+A+ V M + P
Sbjct: 268 CYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKP 327
Query: 317 DHLTYKTVLEGLCRERRADEA 337
D L Y ++ L R R +EA
Sbjct: 328 DSLFYNCLIHTLARAGRLEEA 348
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 117/256 (45%), Gaps = 13/256 (5%)
Query: 111 GRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDL 170
R ++A ++E+ + Y +IIR C ++F F + +++ ++M + P+
Sbjct: 237 ANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYC-QQFEFIKVYEMLSEM-EANGSPPNS 294
Query: 171 ETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVD 230
TYT + +SL + + A+R T+ MK G PD+ N +I ++ ++
Sbjct: 295 ITYTTIMSSL-------NAQKEFEEALRVATR-MKRSGCKPDSLFYNCLIHTLARAGRLE 346
Query: 231 EAIRVFH-EMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCL-RPSTSTYVI 288
EA RVF EM G N +Y+ + C ++ + KEM+ L P TY
Sbjct: 347 EAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQP 406
Query: 289 IVCSLAMDRRFEDAIEVLFDMLGNSR-SPDHLTYKTVLEGLCRERRADEAFDLLDECKKR 347
++ S + ++L +M+ S D TY +++ LCR + A+ L +E +
Sbjct: 407 LLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQ 466
Query: 348 DISMSEKMYKTLLDDL 363
DI+ + LL+++
Sbjct: 467 DITPRHRTCLLLLEEV 482
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 70/156 (44%), Gaps = 1/156 (0%)
Query: 208 GVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQG 267
G+ +T +N+++ K V++A V ++ + PNA++++ G C+ RV +
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNIFIHGWCKANRVEEA 243
Query: 268 LGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEG 327
L +EMK RP +Y I+ F E+L +M N P+ +TY T++
Sbjct: 244 LWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS 303
Query: 328 LCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
L ++ +EA + K+ Y L+ L
Sbjct: 304 LNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTL 339
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 72/146 (49%), Gaps = 1/146 (0%)
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
I++ ++ E +EA+ +F +G +G E N S + + LC++ RV Q ++K
Sbjct: 161 IMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH- 219
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
+ P+ T+ I + R E+A+ + +M G+ P ++Y T++ C++ + +
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 339 DLLDECKKRDISMSEKMYKTLLDDLH 364
++L E + + Y T++ L+
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLN 305
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 104/248 (41%), Gaps = 20/248 (8%)
Query: 87 WTAQQ---RSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFC 143
WT Q+ + ++Y TII+ + + ++ E+ A + Y +I+
Sbjct: 245 WTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSL 304
Query: 144 CGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSL---LRRFNKLHVCYVYLHAVRSL 200
+K F A V +M RS CKPD +L YN L L R +L A R
Sbjct: 305 NAQKE-FEEALRVATRMKRS-GCKPD----SLFYNCLIHTLARAGRLE------EAERVF 352
Query: 201 TKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYG-CEPNAYSYSYIARGLC 259
+M +GV +T N +I Y E D+AI + EM C P+ ++Y + R
Sbjct: 353 RVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCF 412
Query: 260 EKGRVNQGLGFYKEMKEKC-LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDH 318
++G V + KEM K L STY ++ L E A + +M+ +P H
Sbjct: 413 KRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRH 472
Query: 319 LTYKTVLE 326
T +LE
Sbjct: 473 RTCLLLLE 480
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 11/209 (5%)
Query: 139 IIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVR 198
I R+C + A +KML L+ ++ + +L+ + K+ +C L A+
Sbjct: 325 IDRYC--KNMNLPEALGFLDKML-----GKGLKVNCVIVSLILQCYCKMDMC---LEALE 374
Query: 199 SLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGL 258
K+ + + + D N+ A SK V+EA + EM G P+ +Y+ + G
Sbjct: 375 KF-KEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGY 433
Query: 259 CEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDH 318
C +G+V L EM + P TY ++V LA + E+ +E+ M P+
Sbjct: 434 CLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNA 493
Query: 319 LTYKTVLEGLCRERRADEAFDLLDECKKR 347
+T ++EGLC R+ EA D +++
Sbjct: 494 VTNSVIIEGLCFARKVKEAEDFFSSLEQK 522
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%)
Query: 194 LHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSY 253
+ A S+ +M+ +G D + +I Y K + + EA+ +M G + N S
Sbjct: 299 MKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSL 358
Query: 254 IARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNS 313
I + C+ + L +KE ++ + Y + +L+ R E+A E+L +M
Sbjct: 359 ILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRG 418
Query: 314 RSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
PD + Y T+++G C + + +A DL+DE +S Y L+ L
Sbjct: 419 IVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGL 468
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 75/181 (41%), Gaps = 13/181 (7%)
Query: 193 YLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYS 252
YL + K+M A V P + +I A+ K V EA +F M G P+ ++Y+
Sbjct: 571 YLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYT 630
Query: 253 YIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIV-------------CSLAMDRRF 299
+ C + + +++MK++ ++P TY +++ CS+ +
Sbjct: 631 IMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGK 690
Query: 300 EDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTL 359
A EVL + D + Y +++ C+ ++A +L D + Y TL
Sbjct: 691 RKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTL 750
Query: 360 L 360
+
Sbjct: 751 I 751
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 3/175 (1%)
Query: 194 LHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSY 253
L V L +M+ G D ++I Y K ++ + + VF +M G E +A +Y+
Sbjct: 205 LDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNI 264
Query: 254 IARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNS 313
+ R LC GR + L FYKEM EK + TY +++ +A + + + DM+
Sbjct: 265 MIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRIC 324
Query: 314 RSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCR 368
+H + +L+ C + EA +L+ E K +++ + K ++ L+ L CR
Sbjct: 325 EISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGL---CR 376
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 116/286 (40%), Gaps = 14/286 (4%)
Query: 63 FTPSDVDRALTS-VSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLV 121
F P V+ L P LA+ F W Q+ ++H Y T++ R + LV
Sbjct: 153 FEPEIVENVLKRCFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELV 212
Query: 122 EEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLL 181
E+ CD I + +I G+ + V+ KM +S E YN ++
Sbjct: 213 SEMEKNGCDKDIRTWTILISV-YGKAKKIGKGLLVFEKMRKS-----GFELDATAYNIMI 266
Query: 182 RRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGL 241
R + L K+M G+ M++ +K +VD + +M +
Sbjct: 267 RSLCIAGRGDLALE----FYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDM-V 321
Query: 242 YGCEPNAY-SYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFE 300
CE + + ++ Y+ + C G++ + L +E+K K + + I+V L R
Sbjct: 322 RICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMV 381
Query: 301 DAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKK 346
DA+E++ D++ + D Y ++ G R+ +A + + KK
Sbjct: 382 DALEIV-DIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKK 426
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 8/169 (4%)
Query: 169 DLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLE 228
D TY + + LL+R + L MK +G P V +I + K +
Sbjct: 853 DQYTYGSIVHGLLQRGD--------LQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQ 904
Query: 229 VDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVI 288
+++ + +M CEP+ +Y+ + G G+V + ++ M+E+ P TY
Sbjct: 905 LEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSK 964
Query: 289 IVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEA 337
+ L + EDA+++L +ML +P + ++TV GL RE + D A
Sbjct: 965 FINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLA 1013
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 130/338 (38%), Gaps = 37/338 (10%)
Query: 63 FTPSDVDRALTSVS-DPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLV 121
FTP V L + L F W ++ Y H Y IK G+ ++Q +L
Sbjct: 642 FTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLF 701
Query: 122 EEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLL 181
E+ C + + +I+ GR L + A + +M + P T+ L L
Sbjct: 702 YEMRRQGCLITQDTW-AIMIMQYGRTGLTNIAIRTFKEM-KDMGLIPSSSTFKCLITVLC 759
Query: 182 RRF--NKLHVCYVYLHAVRSL--------------------TKQMKA----VGVI--PDT 213
+ N + +RS TK K+ +G I P T
Sbjct: 760 EKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVT 819
Query: 214 FVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEP---NAYSYSYIARGLCEKGRVNQGLGF 270
++ I+A + +++EA+ E+ + E + Y+Y I GL ++G + + L
Sbjct: 820 VAYSIYIRALCRIGKLEEAL---SELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDK 876
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
MKE +P Y ++ +++ E +E M G S P +TY ++ G
Sbjct: 877 VNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMS 936
Query: 331 ERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCR 368
+ +EA++ ++R S K Y ++ L C+
Sbjct: 937 LGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACK 974
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 107/243 (44%), Gaps = 18/243 (7%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFL-FSRAFDVY 157
+ Y +++ L R + AE++V ++ D + +Y++II RK + +A DV+
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIE--GHRKNMNIPKAVDVF 349
Query: 158 NKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYL---HAVRSLTKQMKAVGVIPDTF 214
NKML+ ++ +S+L+ CY + L K+ + + D
Sbjct: 350 NKMLKKRK-----RINCVIVSSILQ-------CYCQMGNFSEAYDLFKEFRETNISLDRV 397
Query: 215 VLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEM 274
N+ A K +V+EAI +F EM G P+ +Y+ + G C +G+ + EM
Sbjct: 398 CYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEM 457
Query: 275 KEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRA 334
P Y ++ LA + ++A E L M P ++T+ V+EGL
Sbjct: 458 DGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGEL 517
Query: 335 DEA 337
D+A
Sbjct: 518 DKA 520
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/316 (18%), Positives = 124/316 (39%), Gaps = 45/316 (14%)
Query: 85 FRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCC 144
F W ++ + Y+ +++ L ++ E L+ ++ Y + I C
Sbjct: 204 FFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLC 263
Query: 145 GRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCY-VYLHAVRSLTKQ 203
+ F + + LR + D + Y ++R +CY + + S+
Sbjct: 264 LNQMTDIAYFLL--QPLRDANILVDKSDLGIAYRKVVR-----GLCYEMRIEDAESVVLD 316
Query: 204 MKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEM----------------GLYGCEPN 247
M+ G+ PD +V + II+ + K + + +A+ VF++M Y C+
Sbjct: 317 MEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCY-CQMG 375
Query: 248 AYS--------------------YSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYV 287
+S Y+ L + G+V + + ++EM K + P Y
Sbjct: 376 NFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYT 435
Query: 288 IIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKR 347
++ + + DA +++ +M G ++PD + Y + GL A EAF+ L + R
Sbjct: 436 TLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENR 495
Query: 348 DISMSEKMYKTLLDDL 363
+ + + +++ L
Sbjct: 496 GVKPTYVTHNMVIEGL 511
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 16/175 (9%)
Query: 150 FSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGV 209
+ + ++ M R E PD+ TYT+L NK R+L+++MKA V
Sbjct: 714 LKKVYALFKDMKRRE-IVPDVVTYTVLLK------NKPE---------RNLSREMKAFDV 757
Query: 210 IPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLG 269
PD F ++I K ++ EA R+F +M G +P+A Y+ + C+ G + +
Sbjct: 758 KPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKM 817
Query: 270 FYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTV 324
+ M E ++P Y ++ + A++++ +ML P + V
Sbjct: 818 IFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 101/236 (42%), Gaps = 36/236 (15%)
Query: 152 RAFDVYNKMLRSEDCKPDLETYTLLYNS-----LLRRFNKLHV--------------CYV 192
+A+ ++ M R D KPD+ TY++L NS + R V C++
Sbjct: 653 QAYALFEDMKR-RDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHL 711
Query: 193 Y-LHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSY 251
L V +L K MK ++PD + Y+ L+ + EM + +P+ + Y
Sbjct: 712 NDLKKVYALFKDMKRREIVPD-------VVTYTVLLKNKPERNLSREMKAFDVKPDVFYY 764
Query: 252 SYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTY-VIIVCSLAMDRRFEDAIEVLFD-M 309
+ + C+ G + + + +M E + P + Y +I C M + +++FD M
Sbjct: 765 TVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMG--YLKEAKMIFDRM 822
Query: 310 LGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHY 365
+ + PD + Y ++ G CR +A L+ E ++ I K K L +HY
Sbjct: 823 IESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGI----KPTKASLSAVHY 874
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 199 SLTKQMKAVGVIPDTFVL-----NMIIKAYSKCLEVDEAIRVFHEMGL-YGCEPNAYSYS 252
S+ +KA+G + + VL ++KAY+ DEAI +F G P+ + +
Sbjct: 127 SVMDLLKAIGEMEQSLVLLIRVSTALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALN 186
Query: 253 YIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDML-G 311
++ + GR + +GF+ E++ L TYV++V +L + E+ ++L +L
Sbjct: 187 FLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLIS 246
Query: 312 NSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDI 349
+R+P + Y +EGLC + D A+ LL + +I
Sbjct: 247 ETRNP-CVFYLNFIEGLCLNQMTDIAYFLLQPLRDANI 283
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 13/173 (7%)
Query: 193 YLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYS 252
Y+ + L +M +GV P+ + +I A+ + V +A F + P+ ++Y+
Sbjct: 580 YISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYT 639
Query: 253 YIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCS---LAMDRRFEDAIEVLFDM 309
+ C Q +++MK + ++P TY +++ S L M R E FD+
Sbjct: 640 IMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREME-----AFDV 694
Query: 310 LGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDD 362
+ PD + Y ++ C + + L + K+R+I Y LL +
Sbjct: 695 I-----PDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN 742
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 131/317 (41%), Gaps = 22/317 (6%)
Query: 56 VNHLKPGFTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQ 115
+ LKP P+ V L S DP+ ++F+ A R + + +L R
Sbjct: 31 IQGLKPLEEPALVK--LKSERDPEKLYNLFKANATNRLVIENRFAFEDTVSRLAGAGRLD 88
Query: 116 QAETLVEE---VIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLET 172
E L+E + G +G I I G+ + +A D + M CK +++
Sbjct: 89 FIEDLLEHQKTLPQGRREGFI----VRIIMLYGKAGMTKQALDTFFNM-DLYGCKRSVKS 143
Query: 173 YTLLYNSLLRRFNK-LHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDE 231
+ L FN LH + +LH S G+ D N+ IK++ + +D
Sbjct: 144 FNAALQVL--SFNPDLHTIWEFLHDAPS------KYGIDIDAVSFNIAIKSFCELGILDG 195
Query: 232 AIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVC 291
A EM G P+ +Y+ + L + R G G + M K +P+ +T+ + +
Sbjct: 196 AYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQ 255
Query: 292 SLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISM 351
L RR DA ++L M PD +TY V++G R D A + +
Sbjct: 256 FLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKP 315
Query: 352 SEKMYKTLLDDLHYVCR 368
+ K+Y+T+ +HY+C+
Sbjct: 316 NLKIYQTM---IHYLCK 329
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 109/249 (43%), Gaps = 9/249 (3%)
Query: 115 QQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYT 174
+ A L +E+ C+ ++ +N+++ K L A + ++ PDL TY
Sbjct: 139 EHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKL-DEAMKTFKELPEKLGITPDLVTYN 197
Query: 175 LLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIR 234
+ +L R+ + + + S+ ++++ G PD N +++ + + E R
Sbjct: 198 TMIKALCRKGS--------MDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDR 249
Query: 235 VFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLA 294
++ M PN SY+ RGL + L MK + + P TY ++ +
Sbjct: 250 IWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYR 309
Query: 295 MDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEK 354
+D E+ ++ +M +PD +TY ++ LC++ D A ++ +E K +
Sbjct: 310 VDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPN 369
Query: 355 MYKTLLDDL 363
MYK +++ L
Sbjct: 370 MYKPVVERL 378
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 102/228 (44%), Gaps = 10/228 (4%)
Query: 79 DLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNS 138
D A+ F+ ++ + Y T+IK L ++ EE+ + + +N+
Sbjct: 174 DEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNT 233
Query: 139 IIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVR 198
++ R+ LF +++ +++S++ P++ +Y L R NK + L V
Sbjct: 234 LLEEFY-RRELFVEGDRIWD-LMKSKNLSPNIRSYNSRVRGLTR--NKKFTDALNLIDV- 288
Query: 199 SLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGL 258
MK G+ PD N +I AY ++E ++ ++EM G P+ +Y + L
Sbjct: 289 -----MKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLL 343
Query: 259 CEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVL 306
C+KG +++ + +E + L + Y +V L + ++A +++
Sbjct: 344 CKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLV 391
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 8/211 (3%)
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPD 212
A + + S P+L TYT L ++L + + VR L ++++ G D
Sbjct: 190 ALGFFESAVDSGVLVPNLVTYTTLVSALCQLGK--------VDEVRDLVRRLEDEGFEFD 241
Query: 213 TFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
+ I Y K + +A+ EM G + SYS + GL ++G V + LG
Sbjct: 242 CVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLG 301
Query: 273 EMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRER 332
+M ++ + P+ TY I+ L + E+A + +L D Y T+++G+CR+
Sbjct: 302 KMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKG 361
Query: 333 RADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+ AF +L + ++R I S Y T+++ L
Sbjct: 362 NLNRAFSMLGDMEQRGIQPSILTYNTVINGL 392
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 72/160 (45%), Gaps = 5/160 (3%)
Query: 202 KQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEK 261
++M G+ D +++I SK V+EA+ + +M G EPN +Y+ I RGLC+
Sbjct: 266 REMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKM 325
Query: 262 GRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTY 321
G++ + + + + YV ++ + A +L DM P LTY
Sbjct: 326 GKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTY 385
Query: 322 KTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
TV+ GLC R EA DE K + Y TLLD
Sbjct: 386 NTVINGLCMAGRVSEA----DEVSKGVVG-DVITYSTLLD 420
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 127/314 (40%), Gaps = 17/314 (5%)
Query: 48 LEKQFETWVNHLKPGFTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQ 107
LE VN+ F S V + P+LAL F + Y T++
Sbjct: 157 LEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSA 216
Query: 108 LNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIR-FCCGRKFLFSRAFDVYNKMLRSEDC 166
L + + LV + + Y++ I + G + + D + + +
Sbjct: 217 LCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQD---REMVEKGM 273
Query: 167 KPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKC 226
D+ +Y++L + L + N + L +M GV P+ II+ K
Sbjct: 274 NRDVVSYSILIDGLSKEGN--------VEEALGLLGKMIKEGVEPNLITYTAIIRGLCKM 325
Query: 227 LEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTY 286
+++EA +F+ + G E + + Y + G+C KG +N+ +M+++ ++PS TY
Sbjct: 326 GKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTY 385
Query: 287 VIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKK 346
++ L M R +A EV ++G D +TY T+L+ + + D ++ +
Sbjct: 386 NTVINGLCMAGRVSEADEVSKGVVG-----DVITYSTLLDSYIKVQNIDAVLEIRRRFLE 440
Query: 347 RDISMSEKMYKTLL 360
I M M LL
Sbjct: 441 AKIPMDLVMCNILL 454
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 136 YNSIIRFCCGRKFLFS--RAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVY 193
YNS+I C + L R FD L + P TY +L ++L + ++
Sbjct: 693 YNSLINGLCQQGCLVEALRLFD----SLENIGLVPSEVTYGILIDNLCKE-------GLF 741
Query: 194 LHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSY 253
L A L M + G++P+ + N I+ Y K + ++A+RV + P+A++ S
Sbjct: 742 LDA-EKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSS 800
Query: 254 IARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGN- 312
+ +G C+KG + + L + E K+K + ++ ++ R E+A +L +ML +
Sbjct: 801 MIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSE 860
Query: 313 ------SRSPDHLTYKTVLEG----LCRERRADEAFDLLDE 343
+R L + G LC + R +A +LDE
Sbjct: 861 SVVKLINRVDAELAESESIRGFLVELCEQGRVPQAIKILDE 901
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 3/161 (1%)
Query: 209 VIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGL 268
++P+ ++ A + +VDE + + G E + YS G + G + L
Sbjct: 203 LVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDAL 262
Query: 269 GFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGL 328
+EM EK + +Y I++ L+ + E+A+ +L M+ P+ +TY ++ GL
Sbjct: 263 MQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGL 322
Query: 329 CRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCRE 369
C+ + +EAF L + I + E +Y TL+D +CR+
Sbjct: 323 CKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDG---ICRK 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 8/182 (4%)
Query: 169 DLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLE 228
D+ YT++ N L + +L +L K+ GV +T N +I +
Sbjct: 654 DVIDYTIIINGLCKEG--------FLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGC 705
Query: 229 VDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVI 288
+ EA+R+F + G P+ +Y + LC++G M K L P+ Y
Sbjct: 706 LVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNS 765
Query: 289 IVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRD 348
IV + EDA+ V+ + +PD T ++++G C++ +EA + E K ++
Sbjct: 766 IVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKN 825
Query: 349 IS 350
IS
Sbjct: 826 IS 827
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 101/230 (43%), Gaps = 39/230 (16%)
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPD 212
A + KM++ E +P+L TYT + L + KL +V + + S VG+ D
Sbjct: 296 ALGLLGKMIK-EGVEPNLITYTAIIRGLCK-MGKLEEAFVLFNRILS-------VGIEVD 346
Query: 213 TFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
F+ +I + ++ A + +M G +P+ +Y+ + GLC GRV++ K
Sbjct: 347 EFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSK 406
Query: 273 EMKEKCLRPST--STYVI---IVCSLAMDRRFEDA-----------IEVLFDMLGN---- 312
+ + ST +Y+ I L + RRF +A + F ++G
Sbjct: 407 GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEA 466
Query: 313 ----------SRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMS 352
+PD TY T+++G C+ + +EA ++ +E +K +S +
Sbjct: 467 DALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAA 516
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 113/273 (41%), Gaps = 30/273 (10%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
+ Y II+ L + ++A L +++ + LY ++I C RK +RAF +
Sbjct: 313 ITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGIC-RKGNLNRAFSMLG 371
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
M +P + TY + N L C A R + GV+ D +
Sbjct: 372 DM-EQRGIQPSILTYNTVINGL---------CM----AGRVSEADEVSKGVVGDVITYST 417
Query: 219 IIKAYSKCLEVDEAIRV---FHE----MGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFY 271
++ +Y K +D + + F E M L C + + + G + Y
Sbjct: 418 LLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMC-------NILLKAFLLMGAYGEADALY 470
Query: 272 KEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRE 331
+ M E L P T+TY ++ + E+A+E +F+ L S + Y +++ LC++
Sbjct: 471 RAMPEMDLTPDTATYATMIKGYCKTGQIEEALE-MFNELRKSSVSAAVCYNRIIDALCKK 529
Query: 332 RRADEAFDLLDECKKRDISMSEKMYKTLLDDLH 364
D A ++L E ++ + + +TLL +H
Sbjct: 530 GMLDTATEVLIELWEKGLYLDIHTSRTLLHSIH 562
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 34/238 (14%)
Query: 136 YNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLR----------RFN 185
YN +I C + F A ++++M++ + KP T+ L + L + + +
Sbjct: 155 YNILIH-GCSQSGCFDDALKLFDEMVKKK-VKPTGVTFGTLIHGLCKDSRVKEALKMKHD 212
Query: 186 KLHVCYV--YLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAI---------- 233
L V V +H SL K + +G + +F + +AY ++VD AI
Sbjct: 213 MLKVYGVRPTVHIYASLIKALCQIGEL--SFAFKLKDEAYEGKIKVDAAIYSTLISSLIK 270
Query: 234 --------RVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTST 285
+ EM GC+P+ +Y+ + G C + EM EK L+P +
Sbjct: 271 AGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVIS 330
Query: 286 YVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDE 343
Y +I+ +++E+A + DM SPD L+Y+ V +GLC + +EA +LDE
Sbjct: 331 YNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDE 388
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 138/336 (41%), Gaps = 71/336 (21%)
Query: 76 SDPDLALDIFR-----WTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACD 130
+DP A+ +FR T +R + ++ L Y II +L + + + + ++ +
Sbjct: 20 NDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHLKTDT-- 77
Query: 131 GSIP---LYNSIIRFCCGRKFLFSRAFDVYNKMLR------------------------- 162
+P ++ ++I F GR L SRA ++++M +
Sbjct: 78 RIVPTEIIFCNVINFF-GRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEK 136
Query: 163 --------SEDCKPDLETYTLL---------YNSLLRRFNKLHVCYVYLHAVRSLTKQMK 205
E KPD TY +L ++ L+ F+++ + K++K
Sbjct: 137 MKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEM------------VKKKVK 184
Query: 206 AVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEM-GLYGCEPNAYSYSYIARGLCEKGRV 264
GV TF +I K V EA+++ H+M +YG P + Y+ + + LC+ G +
Sbjct: 185 PTGV---TF--GTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGEL 239
Query: 265 NQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTV 324
+ E E ++ + Y ++ SL R + +L +M PD +TY +
Sbjct: 240 SFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVL 299
Query: 325 LEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
+ G C E ++ A +LDE ++ + Y +L
Sbjct: 300 INGFCVENDSESANRVLDEMVEKGLKPDVISYNMIL 335
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 100/254 (39%), Gaps = 15/254 (5%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIR--FCCGRKFLFSRAFDVYN 158
Y ++IK L A L +E G +Y+++I GR S +
Sbjct: 226 YASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGR----SNEVSMIL 281
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
+ + + CKPD TY +L N + + + +M G+ PD NM
Sbjct: 282 EEMSEKGCKPDTVTYNVLINGFCVENDS--------ESANRVLDEMVEKGLKPDVISYNM 333
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
I+ + + + +EA +F +M GC P+ SY + GLCE + + EM K
Sbjct: 334 ILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKG 393
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
+P + L + E +V+ L + D + ++ +C+E ++
Sbjct: 394 YKPRRDRLEGFLQKLCESGKLEILSKVI-SSLHRGIAGDADVWSVMIPTMCKEPVISDSI 452
Query: 339 DLLDECKKRDISMS 352
DLL K D +S
Sbjct: 453 DLLLNTVKEDGPLS 466
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 72/141 (51%), Gaps = 4/141 (2%)
Query: 225 KCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTS 284
KC E+++ + +G +P+A +Y+ + G + G + L + EM +K ++P+
Sbjct: 130 KCGELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGV 188
Query: 285 TYVIIVCSLAMDRRFEDAIEVLFDMLG--NSRSPDHLTYKTVLEGLCRERRADEAFDLLD 342
T+ ++ L D R ++A+++ DML R H+ Y ++++ LC+ AF L D
Sbjct: 189 TFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHI-YASLIKALCQIGELSFAFKLKD 247
Query: 343 ECKKRDISMSEKMYKTLLDDL 363
E + I + +Y TL+ L
Sbjct: 248 EAYEGKIKVDAAIYSTLISSL 268
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 127/303 (41%), Gaps = 17/303 (5%)
Query: 64 TPSDVDRALTSV----SDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAET 119
TPS +L ++ DP + F+ Q + Y +++L A ++++ E
Sbjct: 33 TPSPPKPSLITLVNDERDPKFITEKFKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEE 92
Query: 120 LVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNS 179
++EE II GR +F A V+++M +CK ++ L N+
Sbjct: 93 ILEEQNKYPNMSKEGFVARIINLY-GRVGMFENAQKVFDEM-PERNCKRTALSFNALLNA 150
Query: 180 LL--RRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFH 237
+ ++F+ + + L S+ PD N +IK EA+ +
Sbjct: 151 CVNSKKFDLVEGIFKELPGKLSIE---------PDVASYNTLIKGLCGKGSFTEAVALID 201
Query: 238 EMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDR 297
E+ G +P+ +++ + KG+ +G + M EK ++ +Y + LAM+
Sbjct: 202 EIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMEN 261
Query: 298 RFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYK 357
+ E+ + + + GN PD T+ +++G E + DEA E +K + ++
Sbjct: 262 KSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFN 321
Query: 358 TLL 360
+LL
Sbjct: 322 SLL 324
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/253 (17%), Positives = 117/253 (46%), Gaps = 15/253 (5%)
Query: 114 YQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETY 173
++ A+ + +E+ C + +N+++ C S+ FD+ + + K +E
Sbjct: 122 FENAQKVFDEMPERNCKRTALSFNALLNACVN-----SKKFDLVEGIFKELPGKLSIEPD 176
Query: 174 TLLYNSLLRRFNKLHVCY--VYLHAVRSLTKQMKAVGVIPDTFVLNMII-KAYSKCLEVD 230
YN+L++ +C + AV +L +++ G+ PD N+++ ++Y+K + +
Sbjct: 177 VASYNTLIK-----GLCGKGSFTEAV-ALIDEIENKGLKPDHITFNILLHESYTKG-KFE 229
Query: 231 EAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIV 290
E +++ M + + SY+ GL + + + + + ++K L+P T+ ++
Sbjct: 230 EGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMI 289
Query: 291 CSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDIS 350
+ + ++AI ++ N P + ++L +C+ + A++L E + +
Sbjct: 290 KGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLL 349
Query: 351 MSEKMYKTLLDDL 363
+ E + + ++D L
Sbjct: 350 VDEAVLQEVVDAL 362
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/261 (17%), Positives = 118/261 (45%), Gaps = 15/261 (5%)
Query: 91 QRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAG-ACDGSIPLYNSIIRFCCGRKFL 149
+R+ T L++ ++ +++ E + +E+ + + + YN++I+ CG K
Sbjct: 134 ERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCG-KGS 192
Query: 150 FSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVY--LHAVRSLTKQMKAV 207
F+ A + ++ + ++ KPD T+ +L LH Y + +M
Sbjct: 193 FTEAVALIDE-IENKGLKPDHITFNIL----------LHESYTKGKFEEGEQIWARMVEK 241
Query: 208 GVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQG 267
V D N + + + +E + +F ++ +P+ ++++ + +G +G++++
Sbjct: 242 NVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEA 301
Query: 268 LGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEG 327
+ +YKE+++ RP + ++ ++ E A E+ ++ D + V++
Sbjct: 302 ITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDA 361
Query: 328 LCRERRADEAFDLLDECKKRD 348
L + + DEA ++++ K D
Sbjct: 362 LVKGSKQDEAEEIVELAKTND 382
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 81/164 (49%)
Query: 200 LTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLC 259
L + M+ G P+ ++I+A K ++EA++VF EM Y CE + +Y+ + G C
Sbjct: 309 LLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFC 368
Query: 260 EKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHL 319
+ G++++ +M +K L PS TY+ I+ + FE+ +E++ M PD
Sbjct: 369 KWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIG 428
Query: 320 TYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
Y V+ C+ EA L +E ++ +S + +++ L
Sbjct: 429 IYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGL 472
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 140/311 (45%), Gaps = 29/311 (9%)
Query: 58 HLKPGFTPSDVDRALTSVSDP-DLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQ 116
L+PG ++R L D +L F W A+Q Y H+ Y +++K L+ R++
Sbjct: 110 ELRPGL----IERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGA 165
Query: 117 AETLVEEVIAGACDGSIP-LYNSII-RFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYT 174
L+EE+ P L+ ++ RF + +A +V ++M + +PD +
Sbjct: 166 VWGLIEEMRKENPQLIEPELFVVLVQRFASAD--MVKKAIEVLDEMPKF-GFEPDEYVFG 222
Query: 175 LLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM-----IIKAYSKCLEV 229
L ++L + +V+ K + + + F +N+ ++ + + ++
Sbjct: 223 CLLDALCKH-----------GSVKDAAKLFEDMRM---RFPVNLRYFTSLLYGWCRVGKM 268
Query: 230 DEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVII 289
EA V +M G EP+ Y+ + G G++ ++M+ + P+ + Y ++
Sbjct: 269 MEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVL 328
Query: 290 VCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDI 349
+ +L R E+A++V +M D +TY ++ G C+ + D+ + +LD+ K+ +
Sbjct: 329 IQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGL 388
Query: 350 SMSEKMYKTLL 360
SE Y ++
Sbjct: 389 MPSELTYMHIM 399
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 9/142 (6%)
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPD 212
A V+ +M R E C+ D+ TYT L + + + K+ CY+ L M G++P
Sbjct: 341 AMKVFVEMERYE-CEADVVTYTALVSGFCK-WGKIDKCYIVLD-------DMIKKGLMPS 391
Query: 213 TFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
I+ A+ K +E + + +M P+ Y+ + R C+ G V + + +
Sbjct: 392 ELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWN 451
Query: 273 EMKEKCLRPSTSTYVIIVCSLA 294
EM+E L P T+VI++ LA
Sbjct: 452 EMEENGLSPGVDTFVIMINGLA 473
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 16/199 (8%)
Query: 176 LYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVG---VIPDTFVLNMIIKAYSKCLEVDEA 232
+Y S+++ +K+ AV L ++M+ + P+ FV+ +++ ++ V +A
Sbjct: 149 VYKSMVKILSKMR----QFGAVWGLIEEMRKENPQLIEPELFVV--LVQRFASADMVKKA 202
Query: 233 IRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC---LRPSTSTYVII 289
I V EM +G EP+ Y + + LC+ G V +++M+ + LR TS +
Sbjct: 203 IEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSL-LYG 261
Query: 290 VCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDI 349
C + + +A VL M PD + Y +L G + +A+DLL + ++R
Sbjct: 262 WCRVG---KMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGF 318
Query: 350 SMSEKMYKTLLDDLHYVCR 368
+ Y L+ L V R
Sbjct: 319 EPNANCYTVLIQALCKVDR 337
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 137/306 (44%), Gaps = 27/306 (8%)
Query: 76 SDPDLALDIFRWTAQQRSYNHTDLNY---LTIIKQLNAGRRYQQAETLVEEVIAGACDGS 132
S P LAL+ + W + + ++ + +I L RR+ A +++ +++ +
Sbjct: 69 SSPKLALEFYNWVLRSNTVAKSENRFEASCVMIHLLVGSRRFDDALSIMANLMSVEGEKL 128
Query: 133 IPLY--NSIIRF--CCGRKFLFSRAFDVYNKMLRSEDCKPDLE-TYTLLYNSLLRRF--- 184
PL+ + +IR CG + DV++ ++R+ D + Y ++ + F
Sbjct: 129 SPLHVLSGLIRSYQACGS------SPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVS 182
Query: 185 ----NKLHVCYVYLHAVR---SLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFH 237
N C + ++ + + K+M ++G + + N++I ++ K ++ EA+ VF+
Sbjct: 183 VHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFY 242
Query: 238 EMGLYGCEPNAYSYSYIARGLCEKGRVN---QGLGFYKEMKEKCLRPSTSTYVIIVCSLA 294
M G PN S++ + G C+ G + Q LG M + P+ TY ++
Sbjct: 243 RMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFC 302
Query: 295 MDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEK 354
R + A + DM+ + + TY +++ R +DEA L DE + + ++
Sbjct: 303 KAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTV 362
Query: 355 MYKTLL 360
+Y +++
Sbjct: 363 IYNSIV 368
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 109/230 (47%), Gaps = 14/230 (6%)
Query: 136 YNSIIR-FC-CGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVY 193
YNS+I FC GR L R +R + K ++ Y +L+ + +
Sbjct: 294 YNSVINGFCKAGRLDLAER--------IRGDMVKSGVDCNERTYGALVDAYGRAGSSD-- 343
Query: 194 LHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSY 253
A+R L +M + G++ +T + N I+ +++ A+ V +M + + ++ +
Sbjct: 344 -EALR-LCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAI 401
Query: 254 IARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNS 313
+ RGLC G V + + F +++ EK L + ++ D++ A ++L ML
Sbjct: 402 VVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQG 461
Query: 314 RSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
S D +++ T+++G +E + + A ++ D K + + + +Y ++++ L
Sbjct: 462 LSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGL 511
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 101/244 (41%), Gaps = 22/244 (9%)
Query: 132 SIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLR----RFNKL 187
++ +N +I C LF A V+ +ML+ P++ ++ ++ + + RF
Sbjct: 217 NVNTFNLVIYSFCKESKLF-EALSVFYRMLKC-GVWPNVVSFNMMIDGACKTGDMRF--- 271
Query: 188 HVCYVYLHAVRSLTKQMKAVG--VIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCE 245
A++ L K G V P+ N +I + K +D A R+ +M G +
Sbjct: 272 --------ALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVD 323
Query: 246 PNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEV 305
N +Y + G ++ L EM K L +T Y IV L M+ E A+ V
Sbjct: 324 CNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSV 383
Query: 306 LFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHY 365
L DM + D T V+ GLCR EA + + ++ + + TL +H+
Sbjct: 384 LRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTL---MHH 440
Query: 366 VCRE 369
R+
Sbjct: 441 FVRD 444
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 122/284 (42%), Gaps = 20/284 (7%)
Query: 71 ALTSVS-DPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGAC 129
ALT S D AL+ F W ++ + HT + +I L ++ + L+ +I
Sbjct: 53 ALTCYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNT- 111
Query: 130 DGSIPLYNSIIRFCCGR---KFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNK 186
S+P + + R R L A D Y+K+ +D +L T YN +
Sbjct: 112 -ESVPNHVTF-RIVFKRYVTAHLVQEAIDAYDKL---DDF--NLRDETSFYNLVDALCEH 164
Query: 187 LHVCYVYLHAVRSLTKQMKAVG---VIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYG 243
HV L +G + +T + N+I++ +SK + + +M G
Sbjct: 165 KHVV-----EAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEG 219
Query: 244 CEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAI 303
+ +SYS +C+ G+ + + YKEMK + ++ Y ++ ++ + E I
Sbjct: 220 VTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGI 279
Query: 304 EVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKR 347
V +M P+ T+ T+++ LC + R +A+ +LDE KR
Sbjct: 280 RVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKR 323
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 104/248 (41%), Gaps = 45/248 (18%)
Query: 157 YNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVL 216
Y K + +E DL +Y++ + + + +Y K+MK+ + D
Sbjct: 211 YWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLY--------KEMKSRRMKLDVVAY 262
Query: 217 NMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKE 276
N +I+A V+ IRVF EM GCEPN +++ I + LCE GR+ EM +
Sbjct: 263 NTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPK 322
Query: 277 KCLRPSTSTYVIIVCSL--------------------AMD------RRFE------DAIE 304
+ +P + TY+ + L MD R+FE +
Sbjct: 323 RGCQPDSITYMCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLY 382
Query: 305 VLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDIS---MSEKMYKTLLD 361
V M + +PD Y V++ L ++ D A + +E +R +S E + K+L +
Sbjct: 383 VWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSPRRRPELVEKSLDE 442
Query: 362 DLHYVCRE 369
L VCRE
Sbjct: 443 TL--VCRE 448
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 88/185 (47%), Gaps = 21/185 (11%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCC--GRKFLFSRAFDVYN 158
Y T+I+ + A + + + E+ C+ ++ +N+II+ C GR A+ + +
Sbjct: 262 YNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGR---MRDAYRMLD 318
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIP--DTFVL 216
+M + C+PD TY L++ L + + SL +M GV P DT+V
Sbjct: 319 EMPK-RGCQPDSITYMCLFSRLEKP-----------SEILSLFGRMIRSGVRPKMDTYV- 365
Query: 217 NMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKE 276
M+++ + + + + V+ M G P++ +Y+ + L +KG ++ + +EM E
Sbjct: 366 -MLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIE 424
Query: 277 KCLRP 281
+ L P
Sbjct: 425 RGLSP 429
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 116/286 (40%), Gaps = 18/286 (6%)
Query: 65 PSDVDRAL---TSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLV 121
P + D AL S+ + F W + + + Y +K L GR++Q E +
Sbjct: 150 PPNRDNALLVLNSLREWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMA 209
Query: 122 EEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLL 181
E++ + Y++II C R L+++A + + +M ++ PD TY+ + +
Sbjct: 210 LEMVKDGVELDNITYSTIIT-CAKRCNLYNKAIEWFERMYKT-GLMPDEVTYSAILDVYS 267
Query: 182 RRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGL 241
+ V +Y AV A G PD +++ K + + + D V EM
Sbjct: 268 KSGKVEEVLSLYERAV--------ATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKS 319
Query: 242 YGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFED 301
+PN Y+ + + G+ + EM E L P+ T +V R D
Sbjct: 320 MDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARD 379
Query: 302 AIEVLFDMLGNSRSPDHLTYKTVLEGLCR----ERRADEAFDLLDE 343
A+++ +M D + Y T+L +C E A+ F+ + E
Sbjct: 380 ALQLWEEMKAKKWPMDFILYNTLL-NMCADIGLEEEAERLFNDMKE 424
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 111/244 (45%), Gaps = 16/244 (6%)
Query: 97 TDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDV 156
T + Y T+I+ RR Q A ++EE+ + + ++N II G S A +
Sbjct: 284 TVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIID-GLGEAGRLSEALGM 342
Query: 157 YNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVL 216
+ E P + TY NSL++ F K L + K M GV P T
Sbjct: 343 MERFFVCE-SGPTIVTY----NSLVKNFCKAG----DLPGASKILKMMMTRGVDPTTTTY 393
Query: 217 NMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKE 276
N K +SK + +E + ++ ++ G P+ +Y I + LCE G+++ + KEMK
Sbjct: 394 NHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKN 453
Query: 277 KCLRP---STSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERR 333
+ + P +T+ + ++C L M E+A E + + P ++T+K + GL +
Sbjct: 454 RGIDPDLLTTTMLIHLLCRLEM---LEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGM 510
Query: 334 ADEA 337
+D A
Sbjct: 511 SDMA 514
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 111/266 (41%), Gaps = 17/266 (6%)
Query: 91 QRSYNHTDLNYLTIIKQLNA-------GRRYQQAETLVEEVIAGACDGSIPLYNSIIRFC 143
+R D N++ ++ N R+ +QAE L EE+ A ++ Y ++I
Sbjct: 236 ERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGY 295
Query: 144 CGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQ 203
C R A +V +M +E +E +++N ++ + L + ++
Sbjct: 296 C-RMRRVQIAMEVLEEMKMAE-----MEINFMVFNPIIDGLGEAG----RLSEALGMMER 345
Query: 204 MKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGR 263
P N ++K + K ++ A ++ M G +P +Y++ + + +
Sbjct: 346 FFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNK 405
Query: 264 VNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKT 323
+G+ Y ++ E P TY +I+ L D + A++V +M PD LT
Sbjct: 406 TEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTM 465
Query: 324 VLEGLCRERRADEAFDLLDECKKRDI 349
++ LCR +EAF+ D +R I
Sbjct: 466 LIHLLCRLEMLEEAFEEFDNAVRRGI 491
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 209 VIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYS------YIARGLCEKG 262
V DTF++ +I+ Y++ V +AIR F Y EP S + + LC++G
Sbjct: 171 VSADTFIV--LIRRYARAGMVQQAIRAFEFARSY--EPVCKSATELRLLEVLLDALCKEG 226
Query: 263 RVNQGLGFYKEMK---EKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHL 319
V + + + + + PS + I++ R+ + A ++ +M + P +
Sbjct: 227 HVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVV 286
Query: 320 TYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCR 368
TY T++EG CR RR A ++L+E K ++ ++ ++ ++D L R
Sbjct: 287 TYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGR 335
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 101/217 (46%), Gaps = 16/217 (7%)
Query: 136 YNSIIRFCCGRKFLFSRAFD---VYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYV 192
YNS+I C LF +A D V+++ L+ +PD TY +L + + +
Sbjct: 292 YNSLIHVLC----LFGKAKDALIVWDE-LKVSGHEPDNSTYRILIQGCCKSYRMDDAMRI 346
Query: 193 YLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYS 252
Y +M+ G +PDT V N ++ K +V EA ++F +M G + ++Y+
Sbjct: 347 Y--------GEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYN 398
Query: 253 YIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGN 312
+ GL GR G + ++K+K T+ I+ L + + E A++++ +M
Sbjct: 399 ILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETR 458
Query: 313 SRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDI 349
S D +T ++L G ++ R D L+ ++ ++
Sbjct: 459 GFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNL 495
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 168 PDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLT--KQMKAVGVIPDTFVLNMIIKAYSK 225
PD+ TY NSL+ HV ++ A +L ++K G PD ++I+ K
Sbjct: 287 PDICTY----NSLI------HVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCK 336
Query: 226 CLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTST 285
+D+A+R++ EM G P+ Y+ + G + +V + +++M ++ +R S T
Sbjct: 337 SYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWT 396
Query: 286 YVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECK 345
Y I++ L + R E + D+ + D +T+ V LCRE + + A L++E +
Sbjct: 397 YNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEME 456
Query: 346 KRDISMSEKMYKTLLDDLHYVCR 368
R S+ +LL H R
Sbjct: 457 TRGFSVDLVTISSLLIGFHKQGR 479
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 128/309 (41%), Gaps = 35/309 (11%)
Query: 77 DPDLALDIFRWTAQQR-SYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGAC--DGSI 133
DP LD FRW R Y H+ Y I + + + L+ + D ++
Sbjct: 70 DPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTM 129
Query: 134 P--LYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDC-KPDLETYTLLYNSLLRRFNKLHVC 190
L +S+IR G+ F A V + M DC P + Y+S+L K H
Sbjct: 130 AKILLDSLIR--SGK---FESALGVLDYMEELGDCLNPSV------YDSVLIALVKKHEL 178
Query: 191 YVYLHAVRSL-----------TKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEM 239
+ L + L T ++ V +P T +N ++ + E RVF ++
Sbjct: 179 RLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKL 238
Query: 240 -GLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEK------CLRPSTSTYVIIVCS 292
G+ + + +SY+ G G ++ L +KEMKE+ P TY ++
Sbjct: 239 KGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHV 298
Query: 293 LAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMS 352
L + + +DA+ V ++ + PD+ TY+ +++G C+ R D+A + E +
Sbjct: 299 LCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPD 358
Query: 353 EKMYKTLLD 361
+Y LLD
Sbjct: 359 TIVYNCLLD 367
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 15/174 (8%)
Query: 156 VYNKMLRSEDCKPDLETYTLLYN--SLLRRFNKLHVCYVYL----------HAVRSLTKQ 203
+ N++L++ P ++ L +N + ++ F H Y + ++ S+
Sbjct: 91 IINRVLKAH---PPMQKAWLFFNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHL 147
Query: 204 MKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGR 263
MK GV+ DT +I S +VD A+R++ EM GCEP SY+ + L GR
Sbjct: 148 MKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGR 207
Query: 264 VNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPD 317
V + YKEM + P+ TY +++ L + E+A+++ F M PD
Sbjct: 208 VEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPD 261
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 61/134 (45%)
Query: 208 GVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQG 267
G D F ++ + + + VFH M G + +Y+ + + G V+
Sbjct: 117 GFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGA 176
Query: 268 LGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEG 327
+ ++EM++ P+ +Y + L D R E+A EV +ML + SP+ TY ++E
Sbjct: 177 MRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEY 236
Query: 328 LCRERRADEAFDLL 341
L + +EA D+
Sbjct: 237 LVATGKCEEALDIF 250
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 126/277 (45%), Gaps = 11/277 (3%)
Query: 85 FRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQA-ETLVEEVIAGACDGSIPLYNSIIRFC 143
F W + + H+ +Y +++ L + +++ + L+E + S ++ + R
Sbjct: 89 FLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFR-A 147
Query: 144 CGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQ 203
R L S A +N+M+ KP ++ L +SL +K HV + + +
Sbjct: 148 YSRANLPSEACRAFNRMVEF-GIKPCVDDLDQLLHSLC---DKKHVNHA-----QEFFGK 198
Query: 204 MKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGR 263
K G++P +++++ +++ + A +VF EM C + +Y+ + LC+ G
Sbjct: 199 AKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGD 258
Query: 264 VNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKT 323
V+ G ++EM L+P ++ I + + A +VL M P+ T+
Sbjct: 259 VDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNH 318
Query: 324 VLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
+++ LC+ + D+A+ LLDE ++ + Y +++
Sbjct: 319 IIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIM 355
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 8/174 (4%)
Query: 168 PDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCL 227
P +TY++L R + R + +M + D N ++ A K
Sbjct: 206 PSAKTYSILVRGWARIRDA--------SGARKVFDEMLERNCVVDLLAYNALLDALCKSG 257
Query: 228 EVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYV 287
+VD ++F EMG G +P+AYS++ C+ G V+ MK L P+ T+
Sbjct: 258 DVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFN 317
Query: 288 IIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLL 341
I+ +L + + +DA +L +M+ +PD TY +++ C + A LL
Sbjct: 318 HIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLL 371
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 9/213 (4%)
Query: 151 SRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVI 210
S A V+++ML +C DL Y L ++L + + + + ++M +G+
Sbjct: 225 SGARKVFDEML-ERNCVVDLLAYNALLDALCKSGD--------VDGGYKMFQEMGNLGLK 275
Query: 211 PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGF 270
PD + + I AY +V A +V M Y PN Y++++I + LC+ +V+
Sbjct: 276 PDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLL 335
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
EM +K P T TY I+ A ++L M PD TY VL+ L R
Sbjct: 336 LDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIR 395
Query: 331 ERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
R D A ++ + +R + Y ++ L
Sbjct: 396 IGRFDRATEIWEGMSERKFYPTVATYTVMIHGL 428
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
Query: 194 LHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSY 253
+H+ + +MK ++P+ + N IIK K +VD+A + EM G P+ ++Y+
Sbjct: 294 VHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNS 353
Query: 254 IARGLCEKGRVNQGLGFYKEM-KEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGN 312
I C+ VN+ M + KCL P TY +++ L RF+ A E+ M
Sbjct: 354 IMAYHCDHCEVNRATKLLSRMDRTKCL-PDRHTYNMVLKLLIRIGRFDRATEIWEGMSER 412
Query: 313 SRSPDHLTYKTVLEGLCRER 332
P TY ++ GL R++
Sbjct: 413 KFYPTVATYTVMIHGLVRKK 432
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/304 (19%), Positives = 120/304 (39%), Gaps = 16/304 (5%)
Query: 62 GFTPSDVDRA-----LTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQ 116
GFTP+ V T V AL++ R ++ H Y +I + +
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSR-VMKEEGVKHNLKTYSMMINGFVKLKDWAN 537
Query: 117 AETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLL 176
A + E+++ + LYN+II CG + RA +M + +P T+ +
Sbjct: 538 AFAVFEDMVKEGMKPDVILYNNIISAFCGMGNM-DRAIQTVKEMQKLRH-RPTTRTFMPI 595
Query: 177 YNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVF 236
+ + + V+ M+ G +P N +I + ++++A+ +
Sbjct: 596 IHGYAKSGDMRRSLEVF--------DMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEIL 647
Query: 237 HEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMD 296
EM L G N ++Y+ I +G G + ++ ++ + L TY ++ +
Sbjct: 648 DEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKS 707
Query: 297 RRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMY 356
R + A+ V +M + + Y +++G R EA DL+ + KK + Y
Sbjct: 708 GRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTY 767
Query: 357 KTLL 360
+ +
Sbjct: 768 TSFI 771
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 113/251 (45%), Gaps = 20/251 (7%)
Query: 115 QQAETLVEEVIAGACDGSIPLYNSII----RFCCGRKFLFSRAFDVYNKMLRSEDCKPDL 170
++AE LV E+ D I +Y++++ +K L V K L+ P +
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGL------VVFKRLKECGFTPTV 484
Query: 171 ETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVD 230
TY L N L+ + +++ MK GV + +M+I + K +
Sbjct: 485 VTYGCLIN--------LYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWA 536
Query: 231 EAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIV 290
A VF +M G +P+ Y+ I C G +++ + KEM++ RP+T T++ I+
Sbjct: 537 NAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596
Query: 291 CSLAMDRRFEDAIEVLFDMLGNSR-SPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDI 349
A ++EV FDM+ P T+ ++ GL +R+ ++A ++LDE +
Sbjct: 597 HGYAKSGDMRRSLEV-FDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGV 655
Query: 350 SMSEKMYKTLL 360
S +E Y ++
Sbjct: 656 SANEHTYTKIM 666
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 9/212 (4%)
Query: 150 FSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGV 209
++ AF V+ M++ E KPD+ +LYN+++ F + + V K+M+ +
Sbjct: 535 WANAFAVFEDMVK-EGMKPDV----ILYNNIISAFCGMGNMDRAIQTV----KEMQKLRH 585
Query: 210 IPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLG 269
P T II Y+K ++ ++ VF M GC P ++++ + GL EK ++ + +
Sbjct: 586 RPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVE 645
Query: 270 FYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLC 329
EM + + TY I+ A A E + D TY+ +L+ C
Sbjct: 646 ILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACC 705
Query: 330 RERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
+ R A + E R+I + +Y L+D
Sbjct: 706 KSGRMQSALAVTKEMSARNIPRNSFVYNILID 737
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 103/235 (43%), Gaps = 10/235 (4%)
Query: 104 IIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRS 163
+I L R+ ++A +++E+ + Y I++ +AF+ + + L++
Sbjct: 630 LINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDT-GKAFEYFTR-LQN 687
Query: 164 EDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAY 223
E D+ TY L + + + + ++TK+M A + ++FV N++I +
Sbjct: 688 EGLDVDIFTYEALLKACCKSGR--------MQSALAVTKEMSARNIPRNSFVYNILIDGW 739
Query: 224 SKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPST 283
++ +V EA + +M G +P+ ++Y+ + G +N+ +EM+ ++P+
Sbjct: 740 ARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNI 799
Query: 284 STYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
TY ++ A E A+ +M PD Y +L L EA+
Sbjct: 800 KTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAY 854
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 125/331 (37%), Gaps = 79/331 (23%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
+N+ ++I L +QA ++EE++ ++ + ++I C R + +AF ++
Sbjct: 288 INFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWT-EKAFRLFL 346
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
K++RS+ KP++ TYT + + L+ L +MK G+ P+
Sbjct: 347 KLVRSDTYKPNVHTYTSMIGGYCKEDK--------LNRAEMLFSRMKEQGLFPNVNTYTT 398
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGR--------------- 263
+I + K A + + MG G PN Y+Y+ LC+K R
Sbjct: 399 LINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCG 458
Query: 264 --------------------VNQGLGFY-------------------------KEMKEK- 277
+NQ L F+ K+MKE
Sbjct: 459 LEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESE 518
Query: 278 ---------CLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGL 328
L P+ TY ++ + + A++ +M + PD TY +++ GL
Sbjct: 519 RLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGL 578
Query: 329 CRERRADEAFDLLDECKKRDISMSEKMYKTL 359
C++ DEA L + R +S E TL
Sbjct: 579 CKKSMVDEACKLYEAMIDRGLSPPEVTRVTL 609
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 95/196 (48%), Gaps = 10/196 (5%)
Query: 149 LFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVG 208
L +RA + KM+ KP+L +T L + L ++ + + + ++M G
Sbjct: 267 LVNRAIWYFRKMI-DLGFKPNLINFTSLIDGLCKKGS--------IKQAFEMLEEMVRNG 317
Query: 209 VIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGC-EPNAYSYSYIARGLCEKGRVNQG 267
P+ + +I K ++A R+F ++ +PN ++Y+ + G C++ ++N+
Sbjct: 318 WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRA 377
Query: 268 LGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEG 327
+ MKE+ L P+ +TY ++ F A E++ M P+ TY ++
Sbjct: 378 EMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDS 437
Query: 328 LCRERRADEAFDLLDE 343
LC++ RA EA++LL++
Sbjct: 438 LCKKSRAPEAYELLNK 453
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 73/146 (50%)
Query: 203 QMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKG 262
+M GV+PD+ +++ + ++ EA R M G P+ + + I LCE G
Sbjct: 207 EMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENG 266
Query: 263 RVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYK 322
VN+ + ++++M + +P+ + ++ L + A E+L +M+ N P+ T+
Sbjct: 267 LVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHT 326
Query: 323 TVLEGLCRERRADEAFDLLDECKKRD 348
+++GLC+ ++AF L + + D
Sbjct: 327 ALIDGLCKRGWTEKAFRLFLKLVRSD 352
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 87/184 (47%), Gaps = 4/184 (2%)
Query: 180 LLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEM 239
+LR F+++ L+ + M+ G+ P + +N +++ + ++ A VF EM
Sbjct: 153 MLRNFSEIG----RLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEM 208
Query: 240 GLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRF 299
+ G P++ SY + G G++ + + M ++ P +T +I+ +L +
Sbjct: 209 SVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLV 268
Query: 300 EDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTL 359
AI M+ P+ + + ++++GLC++ +AF++L+E + + + L
Sbjct: 269 NRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTAL 328
Query: 360 LDDL 363
+D L
Sbjct: 329 IDGL 332
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 206 AVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVN 265
++G+IP +I Y K ++D A++ FH M +GC P++++Y + GLC+K V+
Sbjct: 526 SLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVD 585
Query: 266 QGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVL 325
+ Y+ M ++ L P T V + +A+ +L + L + T +T++
Sbjct: 586 EACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAM-ILLEPL--DKKLWIRTVRTLV 642
Query: 326 EGLCRERRADEAFDLLDECKKRDIS 350
LC E++ A + ++D S
Sbjct: 643 RKLCSEKKVGVAALFFQKLLEKDSS 667
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 115/276 (41%), Gaps = 35/276 (12%)
Query: 117 AETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSED---CKPDLETY 173
AE +V + C+ + YNS+I C + R+ + + LR+ CKPD+ ++
Sbjct: 75 AEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDI--RSASLVLESLRASHGFICKPDIVSF 132
Query: 174 TLLYNSLLRRFNKLHVCYVYLH----------------------------AVRSLTKQMK 205
L+N + L +VY+ A++S MK
Sbjct: 133 NSLFNGF-SKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSF-HSMK 190
Query: 206 AVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVN 265
+ P+ +I Y K +++ A+ ++ EM N +Y+ + G C+KG +
Sbjct: 191 RDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQ 250
Query: 266 QGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVL 325
+ Y M E + P++ Y I+ ++A++ L ML D Y ++
Sbjct: 251 RAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVII 310
Query: 326 EGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
GLC + EA +++++ +K D+ ++ T+++
Sbjct: 311 SGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMN 346
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 95/247 (38%), Gaps = 40/247 (16%)
Query: 133 IPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYV 192
I Y II CG L A ++ M +S D PD+ +T + N+ +
Sbjct: 303 ITAYGVIISGLCGNGKL-KEATEIVEDMEKS-DLVPDMVIFTTMMNAYFKSGR------- 353
Query: 193 YLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAI------------------- 233
+ A ++ ++ G PD L+ +I +K ++ EAI
Sbjct: 354 -MKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDA 412
Query: 234 -----------RVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPS 282
R+F ++ G P+ + Y+ GLC++G + M ++ L
Sbjct: 413 LCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLD 472
Query: 283 TSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLD 342
Y ++ LA +A +V +ML + SPD + ++ +E A DLL
Sbjct: 473 LLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLL 532
Query: 343 ECKKRDI 349
+ ++R +
Sbjct: 533 DMQRRGL 539
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 131/323 (40%), Gaps = 53/323 (16%)
Query: 60 KPGFTPSDVDR------ALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRR 113
+ G PS V AL + ALD R +R + ++ ++K L+ +
Sbjct: 209 RGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLV-MERGFRVGIVSCNKVLKGLSV-DQ 266
Query: 114 YQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETY 173
+ A L+ V+ ++ + ++I C R + RAFD++ K++ +PDL Y
Sbjct: 267 IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEM-DRAFDLF-KVMEQRGIEPDLIAY 324
Query: 174 TLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAI 233
+ L + + L L Q GV D V + I Y K ++ A
Sbjct: 325 STLIDGYFKAG--------MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATAS 376
Query: 234 RVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIV--- 290
V+ M G PN +Y+ + +GLC+ GR+ + G Y ++ ++ + PS TY ++
Sbjct: 377 VVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGF 436
Query: 291 CSLAMDRR----FEDAIE-----------VLFD-----------------MLGNSRSPDH 318
C R +ED I+ VL D MLG S +
Sbjct: 437 CKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNV 496
Query: 319 LTYKTVLEGLCRERRADEAFDLL 341
+ + ++++G CR R DEA +
Sbjct: 497 VVFNSLIDGWCRLNRFDEALKVF 519
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 15/184 (8%)
Query: 157 YNKMLRSEDCKPDLETYTLL---YNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDT 213
+N ++ + +PD+ TY + Y SL R L + + +K P+T
Sbjct: 624 FNNLIEGK-MEPDIVTYNTMICGYCSLRR-----------LDEAERIFELLKVTPFGPNT 671
Query: 214 FVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKE 273
L ++I K ++D AIR+F M G +PNA +Y + + + ++E
Sbjct: 672 VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE 731
Query: 274 MKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERR 333
M+EK + PS +Y II+ L R ++A + + PD + Y ++ G C+ R
Sbjct: 732 MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGR 791
Query: 334 ADEA 337
EA
Sbjct: 792 LVEA 795
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 110/251 (43%), Gaps = 15/251 (5%)
Query: 78 PDLALDIFRWTAQQRSYNHTDLNYL-TIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLY 136
P + L +F QR+ D+ +I L R + A +I G + I Y
Sbjct: 582 PTIGLQLF--DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTY 639
Query: 137 NSII-RFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLH 195
N++I +C R+ A ++ ++L+ P+ T T+L + L + N +
Sbjct: 640 NTMICGYCSLRRL--DEAERIF-ELLKVTPFGPNTVTLTILIHVLCKN-NDMD------G 689
Query: 196 AVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIA 255
A+R + M G P+ ++ +SK ++++ + ++F EM G P+ SYS I
Sbjct: 690 AIRMFS-IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIII 748
Query: 256 RGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRS 315
GLC++GRV++ + + + L P Y I++ R +A + ML N
Sbjct: 749 DGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 808
Query: 316 PDHLTYKTVLE 326
PD L + + E
Sbjct: 809 PDDLLQRALSE 819
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 112/259 (43%), Gaps = 29/259 (11%)
Query: 132 SIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNS------------ 179
++ ++NS+I C R F A V+ +++ KPD+ T+T +
Sbjct: 495 NVVVFNSLIDGWC-RLNRFDEALKVF-RLMGIYGIKPDVATFTTVMRVSIMEGRLEEALF 552
Query: 180 LLRRFNKLHV---CYVYLHAVRSLTKQMK-AVG-----------VIPDTFVLNMIIKAYS 224
L R K+ + Y + + K MK +G + D V N++I
Sbjct: 553 LFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLF 612
Query: 225 KCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTS 284
KC +++A + F+ + EP+ +Y+ + G C R+++ ++ +K P+T
Sbjct: 613 KCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTV 672
Query: 285 TYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDEC 344
T I++ L + + AI + M P+ +TY +++ + + +F L +E
Sbjct: 673 TLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 732
Query: 345 KKRDISMSEKMYKTLLDDL 363
+++ IS S Y ++D L
Sbjct: 733 QEKGISPSIVSYSIIIDGL 751
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 80/201 (39%), Gaps = 10/201 (4%)
Query: 165 DC--KPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKA 222
DC P++ T+ L N +R + L K M+ G+ PD + +I
Sbjct: 279 DCGPAPNVVTFCTLINGFCKRGE--------MDRAFDLFKVMEQRGIEPDLIAYSTLIDG 330
Query: 223 YSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPS 282
Y K + ++F + G + + +S + G + YK M + + P+
Sbjct: 331 YFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPN 390
Query: 283 TSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLD 342
TY I++ L D R +A + +L P +TY ++++G C+ F L +
Sbjct: 391 VVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYE 450
Query: 343 ECKKRDISMSEKMYKTLLDDL 363
+ K +Y L+D L
Sbjct: 451 DMIKMGYPPDVVIYGVLVDGL 471
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 243 GCEPNAYS-YSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFED 301
G EP+ S + ++ L KG V + L F++ + E+ R + ++ L++D+ E
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQ-IEV 269
Query: 302 AIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
A +L +L +P+ +T+ T++ G C+ D AFDL ++R I Y TL+D
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 131/323 (40%), Gaps = 53/323 (16%)
Query: 60 KPGFTPSDVDR------ALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRR 113
+ G PS V AL + ALD R +R + ++ ++K L+ +
Sbjct: 209 RGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLV-MERGFRVGIVSCNKVLKGLSV-DQ 266
Query: 114 YQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETY 173
+ A L+ V+ ++ + ++I C R + RAFD++ K++ +PDL Y
Sbjct: 267 IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEM-DRAFDLF-KVMEQRGIEPDLIAY 324
Query: 174 TLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAI 233
+ L + + L L Q GV D V + I Y K ++ A
Sbjct: 325 STLIDGYFKAG--------MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATAS 376
Query: 234 RVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIV--- 290
V+ M G PN +Y+ + +GLC+ GR+ + G Y ++ ++ + PS TY ++
Sbjct: 377 VVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGF 436
Query: 291 CSLAMDRR----FEDAIE-----------VLFD-----------------MLGNSRSPDH 318
C R +ED I+ VL D MLG S +
Sbjct: 437 CKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNV 496
Query: 319 LTYKTVLEGLCRERRADEAFDLL 341
+ + ++++G CR R DEA +
Sbjct: 497 VVFNSLIDGWCRLNRFDEALKVF 519
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 15/184 (8%)
Query: 157 YNKMLRSEDCKPDLETYTLL---YNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDT 213
+N ++ + +PD+ TY + Y SL R L + + +K P+T
Sbjct: 595 FNNLIEGK-MEPDIVTYNTMICGYCSLRR-----------LDEAERIFELLKVTPFGPNT 642
Query: 214 FVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKE 273
L ++I K ++D AIR+F M G +PNA +Y + + + ++E
Sbjct: 643 VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE 702
Query: 274 MKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERR 333
M+EK + PS +Y II+ L R ++A + + PD + Y ++ G C+ R
Sbjct: 703 MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGR 762
Query: 334 ADEA 337
EA
Sbjct: 763 LVEA 766
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 108/252 (42%), Gaps = 17/252 (6%)
Query: 78 PDLALDIFRWTAQQRSYNHTDLNYL-TIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLY 136
P + L +F QR+ D+ +I L R + A +I G + I Y
Sbjct: 553 PTIGLQLF--DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTY 610
Query: 137 NSIIRFCCGRKFL--FSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYL 194
N++I C + L R F+ +L+ P+ T T+L + L + N +
Sbjct: 611 NTMICGYCSLRRLDEAERIFE----LLKVTPFGPNTVTLTILIHVLCKN-NDMD------ 659
Query: 195 HAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYI 254
A+R + M G P+ ++ +SK ++++ + ++F EM G P+ SYS I
Sbjct: 660 GAIRMFS-IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSII 718
Query: 255 ARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSR 314
GLC++GRV++ + + + L P Y I++ R +A + ML N
Sbjct: 719 IDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV 778
Query: 315 SPDHLTYKTVLE 326
PD L + + E
Sbjct: 779 KPDDLLQRALSE 790
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 110/233 (47%), Gaps = 6/233 (2%)
Query: 132 SIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYT-LLYNSLLRRFNKLHVC 190
++ ++NS+I C R F A V+ +++ KPD+ T+T ++ S++ H+
Sbjct: 495 NVVVFNSLIDGWC-RLNRFDEALKVF-RLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMK 552
Query: 191 YVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYS 250
+ L ++ K + D V N++I KC +++A + F+ + EP+ +
Sbjct: 553 PTIGLQLFDLMQRNK---ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT 609
Query: 251 YSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDML 310
Y+ + G C R+++ ++ +K P+T T I++ L + + AI + M
Sbjct: 610 YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA 669
Query: 311 GNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
P+ +TY +++ + + +F L +E +++ IS S Y ++D L
Sbjct: 670 EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGL 722
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 80/201 (39%), Gaps = 10/201 (4%)
Query: 165 DC--KPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKA 222
DC P++ T+ L N +R + L K M+ G+ PD + +I
Sbjct: 279 DCGPAPNVVTFCTLINGFCKRGE--------MDRAFDLFKVMEQRGIEPDLIAYSTLIDG 330
Query: 223 YSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPS 282
Y K + ++F + G + + +S + G + YK M + + P+
Sbjct: 331 YFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPN 390
Query: 283 TSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLD 342
TY I++ L D R +A + +L P +TY ++++G C+ F L +
Sbjct: 391 VVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYE 450
Query: 343 ECKKRDISMSEKMYKTLLDDL 363
+ K +Y L+D L
Sbjct: 451 DMIKMGYPPDVVIYGVLVDGL 471
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 243 GCEPNAYS-YSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFED 301
G EP+ S + ++ L KG V + L F++ + E+ R + ++ L++D+ E
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQ-IEV 269
Query: 302 AIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
A +L +L +P+ +T+ T++ G C+ D AFDL ++R I Y TL+D
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 102/224 (45%), Gaps = 9/224 (4%)
Query: 137 NSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHA 196
++I+ C R S A V+ M ++E K D+ TY N+L+ + K H L+
Sbjct: 446 STILIGACSRFGSISDAESVFRNM-KTEGLKLDVVTY----NNLMHGYGKTH----QLNK 496
Query: 197 VRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIAR 256
V L +M++ G+ PD N++I + +DEA + E+ G P+ +++ +
Sbjct: 497 VFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIG 556
Query: 257 GLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSP 316
G ++G + + M + ++P T ++ +R E AI + +L P
Sbjct: 557 GFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKP 616
Query: 317 DHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
D + Y T++ G C ++A +L+ +R + +E + L+
Sbjct: 617 DVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 106/247 (42%), Gaps = 14/247 (5%)
Query: 116 QAETLVEEVIAGACDGSIPLYNSIIRFCC--GRKFLFSRAFDVYNKMLRSEDCKPDLETY 173
+A T+ +E+ Y ++I C GR +AF + +L+S + P L T
Sbjct: 391 RASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRT---DKAFQYFGALLKSGN-PPSLTTS 446
Query: 174 TLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAI 233
T+L + R + + S+ + MK G+ D N ++ Y K ++++
Sbjct: 447 TILIGACSR--------FGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVF 498
Query: 234 RVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSL 293
+ EM G P+ +Y+ + + +G +++ E+ + PST + ++
Sbjct: 499 ELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGF 558
Query: 294 AMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSE 353
+ F++A + F M PD +T +L G C+ +R ++A L ++ +
Sbjct: 559 SKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDV 618
Query: 354 KMYKTLL 360
+Y TL+
Sbjct: 619 VLYNTLI 625
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 107/247 (43%), Gaps = 15/247 (6%)
Query: 89 AQQRSYNHTDLNYLTIIKQLNAGRRY---QQAETLVEEVIAGACDGSIPLYNSIIRFCCG 145
A +S N L TI+ + A R+ AE++ + + YN+++ G
Sbjct: 433 ALLKSGNPPSLTTSTIL--IGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH-GYG 489
Query: 146 RKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMK 205
+ ++ F++ ++M RS PD+ TY +L +S++ R Y+ + ++
Sbjct: 490 KTHQLNKVFELIDEM-RSAGISPDVATYNILIHSMVVR--------GYIDEANEIISELI 540
Query: 206 AVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVN 265
G +P T +I +SK + EA ++ M +P+ + S + G C+ R+
Sbjct: 541 RRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRME 600
Query: 266 QGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVL 325
+ + + ++ + L+P Y ++ E A E++ M+ P+ T+ ++
Sbjct: 601 KAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Query: 326 EGLCRER 332
GL +R
Sbjct: 661 LGLEGKR 667
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 67/153 (43%)
Query: 211 PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGF 270
P+ FV + + ++ A +F E+ G P+ Y+ + G C GR ++ +
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
+ + + PS +T I++ + + DA V +M D +TY ++ G +
Sbjct: 431 FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 331 ERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+ ++ F+L+DE + IS Y L+ +
Sbjct: 491 THQLNKVFELIDEMRSAGISPDVATYNILIHSM 523
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 102/224 (45%), Gaps = 9/224 (4%)
Query: 137 NSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHA 196
++I+ C R S A V+ M ++E K D+ TY N+L+ + K H L+
Sbjct: 446 STILIGACSRFGSISDAESVFRNM-KTEGLKLDVVTY----NNLMHGYGKTH----QLNK 496
Query: 197 VRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIAR 256
V L +M++ G+ PD N++I + +DEA + E+ G P+ +++ +
Sbjct: 497 VFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIG 556
Query: 257 GLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSP 316
G ++G + + M + ++P T ++ +R E AI + +L P
Sbjct: 557 GFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKP 616
Query: 317 DHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
D + Y T++ G C ++A +L+ +R + +E + L+
Sbjct: 617 DVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 106/247 (42%), Gaps = 14/247 (5%)
Query: 116 QAETLVEEVIAGACDGSIPLYNSIIRFCC--GRKFLFSRAFDVYNKMLRSEDCKPDLETY 173
+A T+ +E+ Y ++I C GR +AF + +L+S + P L T
Sbjct: 391 RASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRT---DKAFQYFGALLKSGN-PPSLTTS 446
Query: 174 TLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAI 233
T+L + R + + S+ + MK G+ D N ++ Y K ++++
Sbjct: 447 TILIGACSR--------FGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVF 498
Query: 234 RVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSL 293
+ EM G P+ +Y+ + + +G +++ E+ + PST + ++
Sbjct: 499 ELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGF 558
Query: 294 AMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSE 353
+ F++A + F M PD +T +L G C+ +R ++A L ++ +
Sbjct: 559 SKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDV 618
Query: 354 KMYKTLL 360
+Y TL+
Sbjct: 619 VLYNTLI 625
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 107/247 (43%), Gaps = 15/247 (6%)
Query: 89 AQQRSYNHTDLNYLTIIKQLNAGRRY---QQAETLVEEVIAGACDGSIPLYNSIIRFCCG 145
A +S N L TI+ + A R+ AE++ + + YN+++ G
Sbjct: 433 ALLKSGNPPSLTTSTIL--IGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH-GYG 489
Query: 146 RKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMK 205
+ ++ F++ ++M RS PD+ TY +L +S++ R Y+ + ++
Sbjct: 490 KTHQLNKVFELIDEM-RSAGISPDVATYNILIHSMVVR--------GYIDEANEIISELI 540
Query: 206 AVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVN 265
G +P T +I +SK + EA ++ M +P+ + S + G C+ R+
Sbjct: 541 RRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRME 600
Query: 266 QGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVL 325
+ + + ++ + L+P Y ++ E A E++ M+ P+ T+ ++
Sbjct: 601 KAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Query: 326 EGLCRER 332
GL +R
Sbjct: 661 LGLEGKR 667
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 67/153 (43%)
Query: 211 PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGF 270
P+ FV + + ++ A +F E+ G P+ Y+ + G C GR ++ +
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
+ + + PS +T I++ + + DA V +M D +TY ++ G +
Sbjct: 431 FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 331 ERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+ ++ F+L+DE + IS Y L+ +
Sbjct: 491 THQLNKVFELIDEMRSAGISPDVATYNILIHSM 523
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 112/268 (41%), Gaps = 19/268 (7%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
+ Y T+IK +A + + + + YNS+I + + +R +++
Sbjct: 49 ITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLIS-GAAKNLMLNRVLQLFD 107
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYL----HAVRSLTKQMKAVGVIPDTF 214
+ML S PD+ +Y N L CY L A + L + + G++P
Sbjct: 108 EMLHS-GLSPDMWSY-----------NTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGID 155
Query: 215 VLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEM 274
N+++ A K D AI +F + +P +Y+ + GLC+ RV +E+
Sbjct: 156 TYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMREL 214
Query: 275 KEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRA 334
K+ P+ TY ++ +R E +++ M + D V+ L + RA
Sbjct: 215 KKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRA 274
Query: 335 DEAFDLLDECKKRDISMSEKM-YKTLLD 361
+EA++ + E + + + Y TLL+
Sbjct: 275 EEAYECMHELVRSGTRSQDIVSYNTLLN 302
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 3/143 (2%)
Query: 207 VGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQ 266
+GV+PD N +IK Y++ + +DEA V M G EP+ +Y+ + G + +N+
Sbjct: 42 LGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNR 101
Query: 267 GLGFYKEMKEKCLRPSTSTY-VIIVCSLAMDRRFEDAIEVLF-DMLGNSRSPDHLTYKTV 324
L + EM L P +Y ++ C + R E A ++L D+ P TY +
Sbjct: 102 VLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGE-AFKILHEDIHLAGLVPGIDTYNIL 160
Query: 325 LEGLCRERRADEAFDLLDECKKR 347
L+ LC+ D A +L K R
Sbjct: 161 LDALCKSGHTDNAIELFKHLKSR 183
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 129/312 (41%), Gaps = 31/312 (9%)
Query: 79 DLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNS 138
+L +++F+W Q++Y + Y +I+ QA L E+ +C Y++
Sbjct: 124 ELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDA 183
Query: 139 IIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFN---KLHVCY---- 191
+I GR + A ++ + MLR+ P TY L N+ N L VC
Sbjct: 184 LIN-AHGRAGQWRWAMNLMDDMLRAA-IAPSRSTYNNLINACGSSGNWREALEVCKKMTD 241
Query: 192 -----------VYLHAVRSLTKQ---------MKAVGVIPDTFVLNMIIKAYSKCLEVDE 231
+ L A +S + MK V PDT N+II SK + +
Sbjct: 242 NGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQ 301
Query: 232 AIRVFHEM--GLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVII 289
A+ +F+ M C P+ +++ I KG + ++ M + L+P+ +Y +
Sbjct: 302 ALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNAL 361
Query: 290 VCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDI 349
+ + A+ A+ VL D+ N PD ++Y +L R R+ +A ++ +K
Sbjct: 362 MGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR 421
Query: 350 SMSEKMYKTLLD 361
+ Y L+D
Sbjct: 422 KPNVVTYNALID 433
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 106/278 (38%), Gaps = 31/278 (11%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKM 160
Y +I +++ A L+++++ A S YN++I CG + A +V KM
Sbjct: 181 YDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLIN-ACGSSGNWREALEVCKKM 239
Query: 161 LRSEDCKPDLETYTLL---------YNSLLRRFNKLHVCYV---------YLHAVRSLTK 202
PDL T+ ++ Y+ L F + V ++ + L +
Sbjct: 240 T-DNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQ 298
Query: 203 QMKAVGVI-----------PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSY 251
+A+ + PD I+ YS E++ VF M G +PN SY
Sbjct: 299 SSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY 358
Query: 252 SYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLG 311
+ + G L ++K+ + P +Y ++ S R+ A EV M
Sbjct: 359 NALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRK 418
Query: 312 NSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDI 349
R P+ +TY +++ EA ++ + ++ I
Sbjct: 419 ERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI 456
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 95/214 (44%), Gaps = 10/214 (4%)
Query: 136 YNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLH 195
YN++I FL + A +++ +M + KP++ + L + R K++V V L
Sbjct: 428 YNALIDAYGSNGFL-AEAVEIFRQM-EQDGIKPNVVSVCTLLAACSRSKKKVNVDTV-LS 484
Query: 196 AVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIA 255
A +S G+ +T N I +Y E+++AI ++ M + ++ +++ +
Sbjct: 485 AAQSR-------GINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILI 537
Query: 256 RGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRS 315
G C + + + + KEM++ + + Y ++C+ + + +A + M
Sbjct: 538 SGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCE 597
Query: 316 PDHLTYKTVLEGLCRERRADEAFDLLDECKKRDI 349
PD + Y ++L + +A +L E + I
Sbjct: 598 PDVIAYTSMLHAYNASEKWGKACELFLEMEANGI 631
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 107/245 (43%), Gaps = 30/245 (12%)
Query: 81 ALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPL----Y 136
A++IFR Q + N +++ L A R ++ + V+ V++ A I L Y
Sbjct: 444 AVEIFR----QMEQDGIKPNVVSVCTLLAACSRSKK-KVNVDTVLSAAQSRGINLNTAAY 498
Query: 137 NSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHA 196
NS I L +A +Y M R + K D T+T+L + R Y A
Sbjct: 499 NSAIGSYINAAEL-EKAIALYQSM-RKKKVKADSVTFTILISGSCRMSK-------YPEA 549
Query: 197 VRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIAR 256
+ S K+M+ + + V + ++ AYSK +V EA +F++M + GCEP+ +Y+ +
Sbjct: 550 I-SYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLH 608
Query: 257 GLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDA-----IEVLFDMLG 311
+ + + EM+ + P + I CS A+ R F + VL D++
Sbjct: 609 AYNASEKWGKACELFLEMEANGIEPDS-----IACS-ALMRAFNKGGQPSNVFVLMDLMR 662
Query: 312 NSRSP 316
P
Sbjct: 663 EKEIP 667
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 73/148 (49%), Gaps = 7/148 (4%)
Query: 212 DTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFY 271
D +NMI+ + V EA R + ++ C P+ SY + L +KG++ + + Y
Sbjct: 246 DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELY 305
Query: 272 KEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRE 331
+ M + P ++ +L +R +A+EV ++ P+ +TY ++L+ LC+
Sbjct: 306 RAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKI 365
Query: 332 RRADEAFDLLDE-------CKKRDISMS 352
RR ++ ++L++E C D++ S
Sbjct: 366 RRTEKVWELVEEMELKGGSCSPNDVTFS 393
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 92/225 (40%), Gaps = 15/225 (6%)
Query: 148 FLFSRAFDVYNKMLRSED--------CKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRS 199
L++ DV KM R E+ K D Y LL R+ H +
Sbjct: 144 MLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAH----KVDEAVG 199
Query: 200 LTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVF-HEMGLYGCEPNAYSYSYIARGL 258
+ ++ K G+ D + ++ + V+ A +F +GC+ A + I G
Sbjct: 200 VFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNM--ILNGW 257
Query: 259 CEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDH 318
C G V++ F+K++ RP +Y ++ +L + A+E+ M R+PD
Sbjct: 258 CVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDV 317
Query: 319 LTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
V++ LC ++R EA ++ E ++ + Y +LL L
Sbjct: 318 KICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHL 362
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 93 SYNHTDLNYL--TIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLF 150
++NH Y+ IIK L ++ +A + + + +Y ++IR C + +L
Sbjct: 276 AWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLG 335
Query: 151 SRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVI 210
S A ++ +M++ + +P+ Y ++ + +R + V + +M G
Sbjct: 336 S-ARKLWFEMIK-KGMRPNEFAYNVMIHGHFKRGE--------ISLVEAFYNEMLRNGYG 385
Query: 211 PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGF 270
N +IK + + DEA +F M G PNA +Y+ + +G C++ +V +GL
Sbjct: 386 GTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKL 445
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMD 296
YKE+K L+PS Y +V +L M
Sbjct: 446 YKELKALGLKPSGMAYAALVRNLKMS 471
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 83/192 (43%), Gaps = 12/192 (6%)
Query: 184 FNKLHVCYVYLHAVRSLT------------KQMKAVGVIPDTFVLNMIIKAYSKCLEVDE 231
+N Y+Y ++ L K +K G PD V +I+ + + +
Sbjct: 277 WNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGS 336
Query: 232 AIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVC 291
A +++ EM G PN ++Y+ + G ++G ++ FY EM + + ++
Sbjct: 337 ARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIK 396
Query: 292 SLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISM 351
+ ++A E+ +M +P+ +TY +++G C+E + ++ L E K +
Sbjct: 397 GFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKP 456
Query: 352 SEKMYKTLLDDL 363
S Y L+ +L
Sbjct: 457 SGMAYAALVRNL 468
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 90/198 (45%), Gaps = 12/198 (6%)
Query: 132 SIPLYNSIIR-FCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVC 190
S+ +Y II+ C +K L A+ ++ K L+ + PD ++Y +++R F +
Sbjct: 282 SMYIYQKIIKGLCMNKKQL--EAYCIF-KNLKDKGYAPD----RVVYTTMIRGFCEKG-- 332
Query: 191 YVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYS 250
+L + R L +M G+ P+ F N++I + K E+ ++EM G S
Sbjct: 333 --WLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLS 390
Query: 251 YSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDML 310
+ + +G C G+ ++ +K M E + P+ TY ++ + + E +++ ++
Sbjct: 391 CNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELK 450
Query: 311 GNSRSPDHLTYKTVLEGL 328
P + Y ++ L
Sbjct: 451 ALGLKPSGMAYAALVRNL 468
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 13/222 (5%)
Query: 151 SRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRR--------FNKLHVCY----VYLHAVR 198
SR +YN ++ DLE L++ +L R F + C V AV
Sbjct: 172 SREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVE 231
Query: 199 SLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGL 258
K M + G PD + +I AY + VD A+ ++ +A ++S + R
Sbjct: 232 WFEK-MSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIY 290
Query: 259 CEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDH 318
G + L Y+EMK ++P+ Y ++ S+ +R A + D++ N +P+
Sbjct: 291 GVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNW 350
Query: 319 LTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
TY ++ R R D+A + E K++ +S++ +Y TLL
Sbjct: 351 STYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLL 392
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 115/279 (41%), Gaps = 10/279 (3%)
Query: 67 DVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIA 126
D L ++++P+ A + + + + Y +K + +++E L +E++
Sbjct: 144 DAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLE 203
Query: 127 GACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNK 186
+ +II C + + RA + + KM S C+PD T + ++ R N
Sbjct: 204 RGIKPDNATFTTIIS-CARQNGVPKRAVEWFEKM-SSFGCEPDNVTMAAMIDAYGRAGNV 261
Query: 187 LHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEP 246
+Y R+ T++ + D + +I+ Y D + ++ EM G +P
Sbjct: 262 DMALSLY---DRARTEKWRI-----DAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKP 313
Query: 247 NAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVL 306
N Y+ + + R Q YK++ P+ STY +V + R +DA+ +
Sbjct: 314 NLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIY 373
Query: 307 FDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECK 345
+M S + Y T+L R DEAF++ + K
Sbjct: 374 REMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMK 412
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 9/147 (6%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKM 160
Y +++ R A + E+ ++ LYN+++ C +++ AF+++ M
Sbjct: 353 YAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYV-DEAFEIFQDM 411
Query: 161 LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMII 220
E C PD T++ L ++ C + + QM+ G P FVL +I
Sbjct: 412 KNCETCDPDSWTFSSLIT--------VYACSGRVSEAEAALLQMREAGFEPTLFVLTSVI 463
Query: 221 KAYSKCLEVDEAIRVFHEMGLYGCEPN 247
+ Y K +VD+ +R F ++ G P+
Sbjct: 464 QCYGKAKQVDDVVRTFDQVLELGITPD 490
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 117/265 (44%), Gaps = 16/265 (6%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKM 160
Y +I +++ A L+++++ A S YN++I CG + A +V KM
Sbjct: 49 YDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLIN-ACGSSGNWREALEVCKKM 107
Query: 161 LRSEDCKPDLETYTLLYNSLL--RRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
PDL T+ ++ ++ R+++K S + MK V PDT N+
Sbjct: 108 -TDNGVGPDLVTHNIVLSAYKSGRQYSK----------ALSYFELMKGAKVRPDTTTFNI 156
Query: 219 IIKAYSKCLEVDEAIRVFHEM--GLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKE 276
II SK + +A+ +F+ M C P+ +++ I KG + ++ M
Sbjct: 157 IIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVA 216
Query: 277 KCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADE 336
+ L+P+ +Y ++ + A+ A+ VL D+ N PD ++Y +L R R+ +
Sbjct: 217 EGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGK 276
Query: 337 AFDLLDECKKRDISMSEKMYKTLLD 361
A ++ +K + Y L+D
Sbjct: 277 AKEVFLMMRKERRKPNVVTYNALID 301
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 3/136 (2%)
Query: 215 VLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEM 274
+ NM+I+ +++ VD+A +F EM + C+P+A +Y + G+ + +M
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 275 KEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRA 334
+ PS STY ++ + + +A+EV M N PD +T+ VL R+
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 335 DEA---FDLLDECKKR 347
+A F+L+ K R
Sbjct: 133 SKALSYFELMKGAKVR 148
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 104/258 (40%), Gaps = 33/258 (12%)
Query: 135 LYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNS--------------- 179
+YN +IR R +A ++ +M + CKPD ETY L N+
Sbjct: 13 IYNMMIRLH-ARHNWVDQARGLFFEM-QKWSCKPDAETYDALINAHGRAGQWRWAMNLMD 70
Query: 180 -LLRRF---------NKLHVCYVYLHAVRSLT--KQMKAVGVIPDTFVLNMIIKAYSKCL 227
+LR N ++ C + +L K+M GV PD N+++ AY
Sbjct: 71 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGR 130
Query: 228 EVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEK---CLRPSTS 284
+ +A+ F M P+ +++ I L + G+ +Q L + M+EK C RP
Sbjct: 131 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAEC-RPDVV 189
Query: 285 TYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDEC 344
T+ I+ ++ E+ V M+ P+ ++Y ++ + A +L +
Sbjct: 190 TFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDI 249
Query: 345 KKRDISMSEKMYKTLLDD 362
K+ I Y LL+
Sbjct: 250 KQNGIIPDVVSYTCLLNS 267
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 95/214 (44%), Gaps = 10/214 (4%)
Query: 136 YNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLH 195
YN++I FL + A +++ +M + KP++ + L + R K++V V L
Sbjct: 296 YNALIDAYGSNGFL-AEAVEIFRQM-EQDGIKPNVVSVCTLLAACSRSKKKVNVDTV-LS 352
Query: 196 AVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIA 255
A +S G+ +T N I +Y E+++AI ++ M + ++ +++ +
Sbjct: 353 AAQSR-------GINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILI 405
Query: 256 RGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRS 315
G C + + + + KEM++ + + Y ++C+ + + +A + M
Sbjct: 406 SGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCE 465
Query: 316 PDHLTYKTVLEGLCRERRADEAFDLLDECKKRDI 349
PD + Y ++L + +A +L E + I
Sbjct: 466 PDVIAYTSMLHAYNASEKWGKACELFLEMEANGI 499
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 107/245 (43%), Gaps = 30/245 (12%)
Query: 81 ALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPL----Y 136
A++IFR Q + N +++ L A R ++ + V+ V++ A I L Y
Sbjct: 312 AVEIFR----QMEQDGIKPNVVSVCTLLAACSRSKK-KVNVDTVLSAAQSRGINLNTAAY 366
Query: 137 NSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHA 196
NS I L +A +Y M R + K D T+T+L + R Y A
Sbjct: 367 NSAIGSYINAAEL-EKAIALYQSM-RKKKVKADSVTFTILISGSCRMSK-------YPEA 417
Query: 197 VRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIAR 256
+ S K+M+ + + V + ++ AYSK +V EA +F++M + GCEP+ +Y+ +
Sbjct: 418 I-SYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLH 476
Query: 257 GLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDA-----IEVLFDMLG 311
+ + + EM+ + P + I CS A+ R F + VL D++
Sbjct: 477 AYNASEKWGKACELFLEMEANGIEPDS-----IACS-ALMRAFNKGGQPSNVFVLMDLMR 530
Query: 312 NSRSP 316
P
Sbjct: 531 EKEIP 535
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 123/282 (43%), Gaps = 29/282 (10%)
Query: 68 VDRALTSV----SDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQA-ETLVE 122
+DR L V +P L+ +R+ + R + H+ + T++ L R++ Q E L+E
Sbjct: 74 IDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYILGRNRKFDQIWELLIE 133
Query: 123 --------------EVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDV--YNKMLRSEDC 166
+V+ G + ++ F ++ L FD +N +LR+
Sbjct: 134 TKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKR-LVPDFFDTACFNALLRTLCQ 192
Query: 167 KPDLETYTLLYNSL-------LRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMI 219
+ + +Y+SL L+ FN L + + ++MK G+ PD N +
Sbjct: 193 EKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEEAEAFFEEMKGKGLKPDVVTYNSL 252
Query: 220 IKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCL 279
I Y K E+++A ++ +M P+ +Y+ + GL G+ ++ KEMKE
Sbjct: 253 IDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGC 312
Query: 280 RPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTY 321
P + Y + + + RR DA +++ +M+ SP+ TY
Sbjct: 313 YPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTY 354
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 16/178 (8%)
Query: 136 YNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSL--LRRFNKLHVCYVY 193
YNS+I C + + +A+ + +KM R E+ PD+ TYT + L + + +K
Sbjct: 249 YNSLIDVYCKDREI-EKAYKLIDKM-REEEETPDVITYTTVIGGLGLIGQPDK------- 299
Query: 194 LHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSY 253
R + K+MK G PD N I+ + + +A ++ EM G PNA +Y+
Sbjct: 300 ---AREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 254 IARGLCEKGRVNQGLGFYKEM-KEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDML 310
R L + + Y M +CL P+T + + ++ + + A+ + DM+
Sbjct: 357 FFRVLSLANDLGRSWELYVRMLGNECL-PNTQSCMFLIKMFKRHEKVDMAMRLWEDMV 413
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 114/254 (44%), Gaps = 13/254 (5%)
Query: 110 AGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPD 169
AGR ++ + E++ S ++ +++ C L A ++++E K
Sbjct: 321 AGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEG-LKEEAL-----VIQTEMEKKG 374
Query: 170 LETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEV 229
+ + T++YN+L+ +NK + ++ V L +M+ G+ P N+++ AY++ ++
Sbjct: 375 IRSNTIVYNTLMDAYNKSN----HIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQP 430
Query: 230 DEAIRVFHEMGLYGCEPNAYSYSYI--ARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYV 287
D + EM G EPN SY+ + A G +K F + MK+ L+PS+ +Y
Sbjct: 431 DIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLR-MKKVGLKPSSHSYT 489
Query: 288 IIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKR 347
++ + ++ E A +M P TY +VL+ R + ++ +
Sbjct: 490 ALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLRE 549
Query: 348 DISMSEKMYKTLLD 361
I + Y TLLD
Sbjct: 550 KIKGTRITYNTLLD 563
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 9/202 (4%)
Query: 161 LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMII 220
+R + KP TY +L ++ RR V +L ++M+ +G+ P+ +I
Sbjct: 405 MRDKGLKPSAATYNILMDAYARRMQP--------DIVETLLREMEDLGLEPNVKSYTCLI 456
Query: 221 KAYSKCLEV-DEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCL 279
AY + ++ D A F M G +P+++SY+ + G + ++EM ++ +
Sbjct: 457 SAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGI 516
Query: 280 RPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFD 339
+PS TY ++ + +E+ ML +TY T+L+G ++ EA D
Sbjct: 517 KPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARD 576
Query: 340 LLDECKKRDISMSEKMYKTLLD 361
++ E K + S Y L++
Sbjct: 577 VVSEFSKMGLQPSVMTYNMLMN 598
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 91/197 (46%), Gaps = 10/197 (5%)
Query: 129 CDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLH 188
C + YN +I G+ ++ +Y +M RS CKP++ TYT L N+ R
Sbjct: 282 CKPTTETYNLMINLY-GKASKSYMSWKLYCEM-RSHQCKPNICTYTALVNAFARE----G 335
Query: 189 VCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNA 248
+C + +Q++ G+ PD +V N ++++YS+ A +F M GCEP+
Sbjct: 336 LC----EKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDR 391
Query: 249 YSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFD 308
SY+ + G + ++EMK + P+ ++++++ + + R ++ +
Sbjct: 392 ASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKE 451
Query: 309 MLGNSRSPDHLTYKTVL 325
M N PD ++L
Sbjct: 452 MSENGVEPDTFVLNSML 468
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 118/269 (43%), Gaps = 28/269 (10%)
Query: 75 VSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAE--TLVEEVIAGACDGS 132
+ + L D++ + A SY+ AG Y AE +L++ + C+
Sbjct: 347 LQEDGLEPDVYVYNALMESYSR-------------AGYPYGAAEIFSLMQHM---GCEPD 390
Query: 133 IPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYV 192
YN ++ GR L S A V+ +M R P ++++ LL ++ + +
Sbjct: 391 RASYNIMVD-AYGRAGLHSDAEAVFEEMKRL-GIAPTMKSHMLLLSAYSKARD------- 441
Query: 193 YLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYS 252
+ ++ K+M GV PDTFVLN ++ Y + + + ++ EM C + +Y+
Sbjct: 442 -VTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYN 500
Query: 253 YIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGN 312
+ + G + + + E+KEK RP T+ + + + + + +EV +M+ +
Sbjct: 501 ILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDS 560
Query: 313 SRSPDHLTYKTVLEGLCRERRADEAFDLL 341
+PD T K +L E + ++ +L
Sbjct: 561 GCAPDGGTAKVLLSACSSEEQVEQVTSVL 589
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 114/272 (41%), Gaps = 14/272 (5%)
Query: 94 YNHTDLNYLTIIKQLNAGRRYQQAETLVEEV----IAGACDGSIPLYNSIIRFCCGRKFL 149
Y T+ Y +IK ++AE ++ E+ ++ G + +YN+ I RK
Sbjct: 208 YVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIG-VTVYNAYIEGLMKRKGN 266
Query: 150 FSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGV 209
A DV+ +M R + CKP ETY L+ N L + +K ++ + L +M++
Sbjct: 267 TEEAIDVFQRMKR-DRCKPTTETYNLMIN-LYGKASKSYMSW-------KLYCEMRSHQC 317
Query: 210 IPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLG 269
P+ ++ A+++ ++A +F ++ G EP+ Y Y+ + G
Sbjct: 318 KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAE 377
Query: 270 FYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLC 329
+ M+ P ++Y I+V + DA V +M +P ++ +L
Sbjct: 378 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS 437
Query: 330 RERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
+ R + ++ E + + + ++L+
Sbjct: 438 KARDVTKCEAIVKEMSENGVEPDTFVLNSMLN 469
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 91/197 (46%), Gaps = 10/197 (5%)
Query: 129 CDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLH 188
C + YN +I G+ ++ +Y +M RS CKP++ TYT L N+ R
Sbjct: 260 CKPTTETYNLMINLY-GKASKSYMSWKLYCEM-RSHQCKPNICTYTALVNAFARE----G 313
Query: 189 VCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNA 248
+C + +Q++ G+ PD +V N ++++YS+ A +F M GCEP+
Sbjct: 314 LC----EKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDR 369
Query: 249 YSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFD 308
SY+ + G + ++EMK + P+ ++++++ + + R ++ +
Sbjct: 370 ASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKE 429
Query: 309 MLGNSRSPDHLTYKTVL 325
M N PD ++L
Sbjct: 430 MSENGVEPDTFVLNSML 446
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 118/269 (43%), Gaps = 28/269 (10%)
Query: 75 VSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAE--TLVEEVIAGACDGS 132
+ + L D++ + A SY+ AG Y AE +L++ + C+
Sbjct: 325 LQEDGLEPDVYVYNALMESYSR-------------AGYPYGAAEIFSLMQHM---GCEPD 368
Query: 133 IPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYV 192
YN ++ GR L S A V+ +M R P ++++ LL ++ + +
Sbjct: 369 RASYNIMVD-AYGRAGLHSDAEAVFEEMKRL-GIAPTMKSHMLLLSAYSKARD------- 419
Query: 193 YLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYS 252
+ ++ K+M GV PDTFVLN ++ Y + + + ++ EM C + +Y+
Sbjct: 420 -VTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYN 478
Query: 253 YIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGN 312
+ + G + + + E+KEK RP T+ + + + + + +EV +M+ +
Sbjct: 479 ILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDS 538
Query: 313 SRSPDHLTYKTVLEGLCRERRADEAFDLL 341
+PD T K +L E + ++ +L
Sbjct: 539 GCAPDGGTAKVLLSACSSEEQVEQVTSVL 567
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 114/272 (41%), Gaps = 14/272 (5%)
Query: 94 YNHTDLNYLTIIKQLNAGRRYQQAETLVEEV----IAGACDGSIPLYNSIIRFCCGRKFL 149
Y T+ Y +IK ++AE ++ E+ ++ G + +YN+ I RK
Sbjct: 186 YVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIG-VTVYNAYIEGLMKRKGN 244
Query: 150 FSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGV 209
A DV+ +M R + CKP ETY L+ N L + +K ++ + L +M++
Sbjct: 245 TEEAIDVFQRMKR-DRCKPTTETYNLMIN-LYGKASKSYMSW-------KLYCEMRSHQC 295
Query: 210 IPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLG 269
P+ ++ A+++ ++A +F ++ G EP+ Y Y+ + G
Sbjct: 296 KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAE 355
Query: 270 FYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLC 329
+ M+ P ++Y I+V + DA V +M +P ++ +L
Sbjct: 356 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS 415
Query: 330 RERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
+ R + ++ E + + + ++L+
Sbjct: 416 KARDVTKCEAIVKEMSENGVEPDTFVLNSMLN 447
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 128/289 (44%), Gaps = 16/289 (5%)
Query: 76 SDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEV--IAGACDGSI 133
+D + A F W +Q+ Y + Y ++I L R++ A TL++E+ + + S
Sbjct: 139 NDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQ 198
Query: 134 PLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVY 193
L I ++C +A + ++ R + + ++ + L ++L R N ++
Sbjct: 199 TLLIMIRKYCAVHDV--GKAINTFHAYKRFK-LEMGIDDFQSLLSALCRYKNVSDAGHLI 255
Query: 194 LHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCL-EVDEAIRVFHEMGLYGCEPNAYSYS 252
K+ N+++ + + EA RV+ EMG G + + SYS
Sbjct: 256 FCNKDKYPFDAKS---------FNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYS 306
Query: 253 YIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGN 312
+ + G +N+ L + MK++C+ P Y +V +LA +A ++ M
Sbjct: 307 SMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEE 366
Query: 313 SR-SPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
P+ +TY ++++ LC+ R+ +EA + DE ++ + + + Y +
Sbjct: 367 KGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFM 415
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 97/221 (43%), Gaps = 43/221 (19%)
Query: 115 QQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYT 174
++AE + E+ + Y+S+I C + ++ ++++M + E +PD + Y
Sbjct: 284 REAERVWMEMGNVGVKHDVVSYSSMIS-CYSKGGSLNKVLKLFDRM-KKECIEPDRKVYN 341
Query: 175 LLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKA-VGVIPDTFVLNMIIKAYSKCLEVDEAI 233
+ ++L + ++ R+L K M+ G+ P+ N +IK K + +EA
Sbjct: 342 AVVHALAK--------ASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAK 393
Query: 234 RVFHEM---GLY-----------------------------GCEPNAYSYSYIARGLCEK 261
+VF EM GL+ GCEP +Y + R LC
Sbjct: 394 QVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRW 453
Query: 262 GRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDA 302
+ L + EMKEK + P S+Y++++ L ++ + E+A
Sbjct: 454 RDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEA 494
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 203 QMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKG 262
+M+ GV +T N++I K +EA+ +F MG +GC+P+A +Y + R L +
Sbjct: 312 EMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAA 371
Query: 263 RVNQGLGFYKEMK-----EKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPD 317
R+ +G +MK E + ++ I+C + R E A+ V M N P
Sbjct: 372 RIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGI---ERLEHAMSVFKSMKANGCKPG 428
Query: 318 HLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYK 357
TY ++ +C + A L E K+ I++S K Y+
Sbjct: 429 IKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYR 468
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 117/279 (41%), Gaps = 34/279 (12%)
Query: 81 ALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAG--ACDGSIPLYNS 138
AL W +++HTD + GRR L E+I+ G L ++
Sbjct: 126 ALGFNEWLDSNSNFSHTDETVSFFVDYF--GRRKDFKGML--EIISKYKGIAGGKTLESA 181
Query: 139 IIRFC-CGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAV 197
I R GR + D + KM K D E+ TL+ L + HA
Sbjct: 182 IDRLVRAGRP---KQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKG----------HA- 227
Query: 198 RSLTKQM---KAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYI 254
S+ ++M A + PD + +++I + ++DEA R+ EM G E +Y+ +
Sbjct: 228 -SIAEKMVKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMM 286
Query: 255 ARGLCEKGRVNQGLGFYKEMKEKCLR------P-STSTYVIIVCSLAMDRRFEDAIEVLF 307
+C+ R E+++ L P +T T+ +++ +L RR E+A+ LF
Sbjct: 287 LDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAM-TLF 345
Query: 308 DMLGN-SRSPDHLTYKTVLEGLCRERRADEAFDLLDECK 345
+G PD TY ++ L + R E +++D+ K
Sbjct: 346 GRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMK 384
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 76/155 (49%), Gaps = 1/155 (0%)
Query: 212 DTFVLNMIIKAYSKCL-EVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGF 270
D N+I+ + +V EA R++ EMG Y PN SYS++ + G + L
Sbjct: 257 DVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRL 316
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
Y EMK++ L P Y +V L + F++A++++ + PD +TY +++ LC
Sbjct: 317 YDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCE 376
Query: 331 ERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHY 365
+ D A ++L ++S + + L+ +++
Sbjct: 377 AGKLDVARNVLATMISENLSPTVDTFHAFLEAVNF 411
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 77/164 (46%), Gaps = 4/164 (2%)
Query: 200 LTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLC 259
L +MK G+ P V N ++ ++ DEA+++ ++ G +P++ +Y+ + R LC
Sbjct: 316 LYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLC 375
Query: 260 EKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHL 319
E G+++ M + L P+ T+ + ++ FE +EVL M + P
Sbjct: 376 EAGKLDVARNVLATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQMKISDLGPTEE 431
Query: 320 TYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
T+ +L L + ++ + A + E + +I + +Y + L
Sbjct: 432 TFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGL 475
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 120/281 (42%), Gaps = 17/281 (6%)
Query: 84 IFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIP---LYNSII 140
IFR Q + + Y I+K G ++++AE + E ++ P +Y+ +I
Sbjct: 203 IFR-RMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMI 261
Query: 141 RFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSL 200
+ + + +A V++ M+ + T+ YNSL+ Y V +
Sbjct: 262 -YMYKKAGNYEKARKVFSSMVGK-----GVPQSTVTYNSLM----SFETSY---KEVSKI 308
Query: 201 TKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCE 260
QM+ + PD ++IKAY + +EA+ VF EM G P +Y+ +
Sbjct: 309 YDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAI 368
Query: 261 KGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLT 320
G V Q +K M+ + P +Y ++ + E A + + + P+ +T
Sbjct: 369 SGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVT 428
Query: 321 YKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
Y T+++G + ++ ++ ++ + I ++ + T++D
Sbjct: 429 YGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD 469
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 97/247 (39%), Gaps = 13/247 (5%)
Query: 114 YQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETY 173
Y++A + ++ S YNS++ F + +Y++M RS D +PD+ +Y
Sbjct: 270 YEKARKVFSSMVGKGVPQSTVTYNSLMSFETS----YKEVSKIYDQMQRS-DIQPDVVSY 324
Query: 174 TLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAI 233
LL + R + V+ ++M GV P N+++ A++ V++A
Sbjct: 325 ALLIKAYGRARREEEALSVF--------EEMLDAGVRPTHKAYNILLDAFAISGMVEQAK 376
Query: 234 RVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSL 293
VF M P+ +SY+ + + F+K +K P+ TY ++
Sbjct: 377 TVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGY 436
Query: 294 AMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSE 353
A E +EV M + + T+++ R + A E + + +
Sbjct: 437 AKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQ 496
Query: 354 KMYKTLL 360
K LL
Sbjct: 497 KAKNVLL 503
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 45/99 (45%)
Query: 218 MIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEK 277
M+I AY K + A RV + G PN SY+ + G+ N ++ M+
Sbjct: 151 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 210
Query: 278 CLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSP 316
PS TY II+ + +F++A EV +L +SP
Sbjct: 211 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSP 249
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 120/281 (42%), Gaps = 17/281 (6%)
Query: 84 IFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIP---LYNSII 140
IFR Q + + Y I+K G ++++AE + E ++ P +Y+ +I
Sbjct: 196 IFR-RMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMI 254
Query: 141 RFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSL 200
+ + + +A V++ M+ + T+ YNSL+ Y V +
Sbjct: 255 -YMYKKAGNYEKARKVFSSMVGK-----GVPQSTVTYNSLM----SFETSY---KEVSKI 301
Query: 201 TKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCE 260
QM+ + PD ++IKAY + +EA+ VF EM G P +Y+ +
Sbjct: 302 YDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAI 361
Query: 261 KGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLT 320
G V Q +K M+ + P +Y ++ + E A + + + P+ +T
Sbjct: 362 SGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVT 421
Query: 321 YKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
Y T+++G + ++ ++ ++ + I ++ + T++D
Sbjct: 422 YGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD 462
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 97/247 (39%), Gaps = 13/247 (5%)
Query: 114 YQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETY 173
Y++A + ++ S YNS++ F + +Y++M RS D +PD+ +Y
Sbjct: 263 YEKARKVFSSMVGKGVPQSTVTYNSLMSFETS----YKEVSKIYDQMQRS-DIQPDVVSY 317
Query: 174 TLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAI 233
LL + R + V+ ++M GV P N+++ A++ V++A
Sbjct: 318 ALLIKAYGRARREEEALSVF--------EEMLDAGVRPTHKAYNILLDAFAISGMVEQAK 369
Query: 234 RVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSL 293
VF M P+ +SY+ + + F+K +K P+ TY ++
Sbjct: 370 TVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGY 429
Query: 294 AMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSE 353
A E +EV M + + T+++ R + A E + + +
Sbjct: 430 AKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQ 489
Query: 354 KMYKTLL 360
K LL
Sbjct: 490 KAKNVLL 496
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 45/99 (45%)
Query: 218 MIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEK 277
M+I AY K + A RV + G PN SY+ + G+ N ++ M+
Sbjct: 144 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 203
Query: 278 CLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSP 316
PS TY II+ + +F++A EV +L +SP
Sbjct: 204 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSP 242
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 2/165 (1%)
Query: 197 VRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIAR 256
R L ++ G+ PD N ++ + KC +V AI+V EM G EP++ ++ +
Sbjct: 299 ARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFI 358
Query: 257 GLCEKGR--VNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSR 314
G+ + N +Y++MKE+ L P T T V+++ + +++ ML
Sbjct: 359 GMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGY 418
Query: 315 SPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTL 359
P + + LC RRA++AF+ + +R +SE +Y+ L
Sbjct: 419 CPHGHALELLTTALCARRRANDAFECSWQTVERGRCVSEPVYRML 463
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 101/218 (46%), Gaps = 10/218 (4%)
Query: 132 SIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCY 191
++ Y S+I+ C +K L A V+ ++L+ + D Y +L + R
Sbjct: 295 NVVTYTSLIKGYC-KKGLMEEAEHVF-ELLKEKKLVADQHMYGVLMDGYCRTGQ------ 346
Query: 192 VYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSY 251
AVR + M +GV +T + N +I Y K ++ EA ++F M + +P+ ++Y
Sbjct: 347 -IRDAVR-VHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTY 404
Query: 252 SYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLG 311
+ + G C G V++ L +M +K + P+ TY I++ + F D + + ML
Sbjct: 405 NTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLK 464
Query: 312 NSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDI 349
+ D ++ T+LE L + +EA L + R +
Sbjct: 465 RGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGL 502
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 102/243 (41%), Gaps = 43/243 (17%)
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPD 212
A VY++M+ S + PD+ T +++ N+ R N + V+ S ++G+ +
Sbjct: 209 ALHVYDQMI-SFEVSPDVFTCSIVVNAYCRSGN-VDKAMVFAKETES------SLGLELN 260
Query: 213 TFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
N +I Y+ +V+ RV M G N +Y+ + +G C+KG + + ++
Sbjct: 261 VVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFE 320
Query: 273 EMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDML----------------GNSRS- 315
+KEK L Y +++ + DA+ V +M+ G +S
Sbjct: 321 LLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSG 380
Query: 316 ------------------PDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYK 357
PDH TY T+++G CR DEA L D+ ++++ + Y
Sbjct: 381 QLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYN 440
Query: 358 TLL 360
LL
Sbjct: 441 ILL 443
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 22/166 (13%)
Query: 125 IAGACDGSIP---------LYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTL 175
IA + + S P +YN I C + A +++ +L S+ PD TYT+
Sbjct: 702 IAESVENSTPKKLLVPNNIVYNVAIAGLC-KAGKLEDARKLFSDLLSSDRFIPDEYTYTI 760
Query: 176 LYNSLLRRFNKLHVCYVY--LHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAI 233
L +H C + ++ +L +M G+IP+ N +IK K VD A
Sbjct: 761 L----------IHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQ 810
Query: 234 RVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCL 279
R+ H++ G PNA +Y+ + GL + G V + + ++M EK L
Sbjct: 811 RLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 81/174 (46%), Gaps = 6/174 (3%)
Query: 200 LTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLC 259
L + + A G++ DT LN++I K +V+EA + + ++ C+P +Y ++ G
Sbjct: 493 LWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYY 552
Query: 260 EKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHL 319
+ G + + + M+ K + P+ Y ++ R +++ ++ +P
Sbjct: 553 KVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVA 612
Query: 320 TYKTVLEGLCRERRADEA----FDLLDECKKRDISMSEKMYKTL--LDDLHYVC 367
TY ++ G C D+A F+++++ ++++ K+ +L LD + C
Sbjct: 613 TYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEAC 666
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 209 VIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCE---PNAYSYSYIARGLCEKGRVN 265
++P+ V N+ I K ++++A ++F + L + P+ Y+Y+ + G G +N
Sbjct: 715 LVPNNIVYNVAIAGLCKAGKLEDARKLFSD--LLSSDRFIPDEYTYTILIHGCAIAGDIN 772
Query: 266 QGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVL 325
+ EM K + P+ TY ++ L + A +L + +P+ +TY T++
Sbjct: 773 KAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLI 832
Query: 326 EGLCRERRADEAFDL 340
+GL + EA L
Sbjct: 833 DGLVKSGNVAEAMRL 847
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 94/224 (41%), Gaps = 10/224 (4%)
Query: 137 NSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHA 196
NS+I C L A ++++M KPD TY L + R Y+
Sbjct: 370 NSLINGYCKSGQLVE-AEQIFSRM-NDWSLKPDHHTYNTLVDGYCRAG--------YVDE 419
Query: 197 VRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIAR 256
L QM V+P N+++K YS+ + + ++ M G + S S +
Sbjct: 420 ALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLE 479
Query: 257 GLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSP 316
L + G N+ + ++ + + L T T +++ L + +A E+L ++ P
Sbjct: 480 ALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKP 539
Query: 317 DHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
TY+ + G + EAF + + +++ I + +MY TL+
Sbjct: 540 AVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLI 583
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Query: 246 PNAYSYSYIARGLCEKGRVNQGLGFYKEM-KEKCLRPSTSTYVIIVCSLAMDRRFEDAIE 304
PN Y+ GLC+ G++ + ++ P TY I++ A+ A
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 305 VLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+ +M P+ +TY +++GLC+ D A LL + ++ I+ + Y TL+D L
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGL 835
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 51/101 (50%)
Query: 210 IPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLG 269
IPD + ++I + ++++A + EM L G PN +Y+ + +GLC+ G V++
Sbjct: 752 IPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQR 811
Query: 270 FYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDML 310
++ +K + P+ TY ++ L +A+ + M+
Sbjct: 812 LLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMI 852
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 82/169 (48%), Gaps = 2/169 (1%)
Query: 202 KQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEK 261
+QM PDT N ++ + EA +++ EM +P+ Y+Y + ++
Sbjct: 374 RQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKE 433
Query: 262 GRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTY 321
G++++G +YK M E LRP+ + Y + L + +DA + FDM+ + D Y
Sbjct: 434 GKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDA-KSFFDMMVSKLKMDDEAY 492
Query: 322 KTVLEGLCRERRADEAFDLLDECKKRD-ISMSEKMYKTLLDDLHYVCRE 369
K ++ L R DE ++DE D + +SE++ + + ++L RE
Sbjct: 493 KFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEELRKGGRE 541
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 77/162 (47%), Gaps = 9/162 (5%)
Query: 208 GVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEP--NAYSYSYIARGLCEKGRVN 265
G + D V ++K Y EA+ + E + +A +Y+Y+ L E G+ +
Sbjct: 268 GFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFD 327
Query: 266 QGLGFYKEMKEKCLRP-----STSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSR-SPDHL 319
+ L + +K++ P + T+ ++V +FE+A+EV F +G+ + SPD L
Sbjct: 328 EALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEV-FRQMGDFKCSPDTL 386
Query: 320 TYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
++ ++ LC EA L E +++++ E Y L+D
Sbjct: 387 SFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMD 428
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 119/284 (41%), Gaps = 14/284 (4%)
Query: 81 ALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSII 140
AL IF +Q Y Y + K L ++ QA L E +++ +I +Y S+I
Sbjct: 127 ALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLI 186
Query: 141 RFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSL--LRRFNKLHVCYVYLHAVR 198
G+ L +AF M DCKPD+ T+T+L + L RF+ V+
Sbjct: 187 S-VYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFD----------LVK 235
Query: 199 SLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYG-CEPNAYSYSYIARG 257
S+ +M +GV T N II Y K +E V +M G P+ + + I
Sbjct: 236 SIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGS 295
Query: 258 LCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPD 317
+ + +Y + ++P +T+ I++ S ++ V+ M S
Sbjct: 296 YGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLT 355
Query: 318 HLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
+TY V+E + R ++ D+ + K + + + Y +L++
Sbjct: 356 TVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVN 399
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 118/302 (39%), Gaps = 48/302 (15%)
Query: 64 TPSD--VDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLV 121
PSD + R + AL+ FRW + + H+ Y + +L RR+ L+
Sbjct: 40 VPSDDHIVRLILDQKSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLL 99
Query: 122 EEV---IAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYN 178
+E+ I D +I + +IIR GR L R V + ++ KP L+ + + +
Sbjct: 100 DEMPDSIGLPPDDAI--FVTIIR-GFGRARLIKRVISVVD-LVSKFGIKPSLKVFNSILD 155
Query: 179 SLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHE 238
L++ + A T++M A G+ D + +++K S + + ++
Sbjct: 156 VLVKEDIDI--------AREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQI 207
Query: 239 MGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKE---------------------- 276
M G PNA Y+ + LC+ G+V + EMKE
Sbjct: 208 MKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQS 267
Query: 277 -----KCLR----PSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEG 327
KC P T ++ L + R +A+EVL + D + T+++G
Sbjct: 268 MVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKG 327
Query: 328 LC 329
C
Sbjct: 328 YC 329
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 114/275 (41%), Gaps = 20/275 (7%)
Query: 77 DPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLY 136
D D+A + F + Y ++K L+ R L++ + + +Y
Sbjct: 161 DIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVY 220
Query: 137 NSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHA 196
N+++ C + RA + L SE +P+ T+ +L ++ KL V L
Sbjct: 221 NTLLHALC-KNGKVGRA-----RSLMSEMKEPNDVTFNILISAYCNE-QKLIQSMVLLEK 273
Query: 197 VRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIAR 256
SL G +PD + +++ V EA+ V + G + + + + + +
Sbjct: 274 CFSL-------GFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVK 326
Query: 257 GLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIV---CSLAMDRRFEDAIEVLFDMLGNS 313
G C G++ F+ EM+ K P+ TY +++ C + M + A++ DM ++
Sbjct: 327 GYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGM---LDSALDTFNDMKTDA 383
Query: 314 RSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRD 348
+ T+ T++ GL R D+ +L+ + D
Sbjct: 384 IRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSD 418
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 115/264 (43%), Gaps = 33/264 (12%)
Query: 68 VDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVE----- 122
+D AL + +D + D RW N N T+I+ L+ G R ++E
Sbjct: 369 LDSALDTFND--MKTDAIRW-------NFATFN--TLIRGLSIGGRTDDGLKILEMMQDS 417
Query: 123 EVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLR 182
+ + GA I YN +I + Y + + + L+ L ++ R
Sbjct: 418 DTVHGA---RIDPYNCVI-------------YGFYKENRWEDALEFLLKMEKLFPRAVDR 461
Query: 183 RFNKLHVC-YVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGL 241
F + +C + +++ QM G +P V + +I YS+ +++E++ + ++M
Sbjct: 462 SFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVT 521
Query: 242 YGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFED 301
G P + +++ + G C++ +V G+ F ++M E+ P T +Y ++ L + +
Sbjct: 522 RGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQK 581
Query: 302 AIEVLFDMLGNSRSPDHLTYKTVL 325
A + M+ S PD + +++
Sbjct: 582 AWLLFSRMVEKSIVPDPSMWSSLM 605
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%)
Query: 196 AVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIA 255
A + K M G P ++ A K DEA RV++ M G EPN Y+Y+ +A
Sbjct: 476 AAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMA 535
Query: 256 RGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRS 315
L + + N KEM K + PS T+ ++ A + A E M +
Sbjct: 536 SVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVE 595
Query: 316 PDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
P+ +TY+ ++E L + + A++L + + + +S K Y ++
Sbjct: 596 PNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVV 640
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 93/188 (49%), Gaps = 13/188 (6%)
Query: 159 KMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNM 218
++L S+ +L++Y+L+ S L + ++ Y L ++MK G+ PD + N
Sbjct: 386 ELLSSKGYFSELQSYSLMI-SFLCKAGRVRESYTAL-------QEMKKEGLAPDVSLYNA 437
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
+I+A K + A +++ EM + GC+ N +Y+ + R L E+G + L + +M E+
Sbjct: 438 LIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERG 497
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLE---GLCRERRAD 335
+ P + Y+ ++ L + + E A+EV + R +T + + E LC +
Sbjct: 498 IEPDETIYMSLIEGLCKETKIEAAMEVFRKCM--ERDHKTVTRRVLSEFVLNLCSNGHSG 555
Query: 336 EAFDLLDE 343
EA LL E
Sbjct: 556 EASQLLRE 563
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 110/276 (39%), Gaps = 32/276 (11%)
Query: 62 GFTPSDVDRALTSVSDP------DLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQ 115
GF S + V DP LAL F W AQQ Y+H ++Y +I K L+ R++
Sbjct: 40 GFRHSISPSLVARVIDPFLLNHHSLALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFS 99
Query: 116 QAETLVEEVIAGACDGSIPLYNSII-RFCCGRK-----FLFSRAF--------DVYNKML 161
+ L ++V + +Y S+I GRK ++ AF DV N++L
Sbjct: 100 AMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLL 159
Query: 162 RSEDCKPDLETYTLLYNSLLRRFNKLHV----CYVYLHAVRSLTKQM--------KAVGV 209
+ L+ + + L+ Y+ S T Q+ KA
Sbjct: 160 AGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLN 219
Query: 210 IPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLG 269
I + + +I+ + KC +A + E+ C+P+ +Y IA G + +
Sbjct: 220 INGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQV 279
Query: 270 FYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEV 305
K+ ++ + P +S Y + L +R +A EV
Sbjct: 280 VLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEV 315
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 3/166 (1%)
Query: 204 MKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGR 263
M + G +P L+ + K + + D I+ + + G SYS + LC+ GR
Sbjct: 353 MVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGR 412
Query: 264 VNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKT 323
V + +EMK++ L P S Y ++ + A ++ +M + TY
Sbjct: 413 VRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNV 472
Query: 324 VLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCRE 369
++ L E A+E+ L D+ +R I E +Y +L++ L C+E
Sbjct: 473 LIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGL---CKE 515
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 84/187 (44%), Gaps = 5/187 (2%)
Query: 175 LLYNSLLRRFNKL-HVCYVY--LHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDE 231
L+ N + FN L VC + R + + ++ G+ D + +I + +K +VD
Sbjct: 461 LILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDA 520
Query: 232 AIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVC 291
VFH+M G E N +++ + G G+V + G Y ++ K ++P + ++
Sbjct: 521 MFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALIS 580
Query: 292 SLAMDRRFEDAIEVLFDMLGNSRS--PDHLTYKTVLEGLCRERRADEAFDLLDECKKRDI 349
+ + A +VL +M + PDH++ +++ C + + A ++ K I
Sbjct: 581 ACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGI 640
Query: 350 SMSEKMY 356
+ ++Y
Sbjct: 641 RGTPEVY 647
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 96/228 (42%), Gaps = 12/228 (5%)
Query: 135 LYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYL 194
LY ++I C + F+V+++M S + +L T+ L + R Y
Sbjct: 504 LYTTLIS-SCAKSGKVDAMFEVFHQMSNS-GVEANLHTFGALIDGCARAGQVAKAFGAY- 560
Query: 195 HAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMG--LYGCEPNAYSYS 252
+++ V PD V N +I A + VD A V EM + +P+ S
Sbjct: 561 -------GILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIG 613
Query: 253 YIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGN 312
+ + C G+V + Y+ + + +R + Y I V S + ++ A + DM
Sbjct: 614 ALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEK 673
Query: 313 SRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
+PD + + +++ + DEAF +L + K + I + Y +L+
Sbjct: 674 DVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLM 721
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 14/216 (6%)
Query: 137 NSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHA 196
++++ CC + RA +VY +M+ + E YT+ NS + + C +Y
Sbjct: 613 GALMKACCNAGQV-ERAKEVY-QMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIY--- 667
Query: 197 VRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIAR 256
K MK V PD + +I +DEA + + G SYS +
Sbjct: 668 -----KDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMG 722
Query: 257 GLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSP 316
C + L Y+++K LRP+ ST ++ +L + A+E L ++ P
Sbjct: 723 ACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKP 782
Query: 317 DHLTYKTVLEGLCRERRAD--EAFDLLDECKKRDIS 350
+ +TY ++ L ER+ D +F LL + K +S
Sbjct: 783 NTITYSMLM--LASERKDDFEVSFKLLSQAKGDGVS 816
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/202 (19%), Positives = 83/202 (41%), Gaps = 7/202 (3%)
Query: 144 CGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQ 203
C R ++AF Y +LRS++ KPD +++N+L+ + + + +
Sbjct: 547 CARAGQVAKAFGAYG-ILRSKNVKPD----RVVFNALISACGQSGAVDRAFDVLAEMKAE 601
Query: 204 MKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGR 263
+ PD + ++KA +V+ A V+ + YG Y+ + G
Sbjct: 602 THPID--PDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGD 659
Query: 264 VNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKT 323
+ YK+MKEK + P + ++ + ++A +L D ++Y +
Sbjct: 660 WDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSS 719
Query: 324 VLEGLCRERRADEAFDLLDECK 345
++ C + +A +L ++ K
Sbjct: 720 LMGACCNAKDWKKALELYEKIK 741
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 76/142 (53%), Gaps = 14/142 (9%)
Query: 210 IPDTFVL--NMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQG 267
+PD ++ N ++ Y K E+DEA +VF M E N S++ + +G G+V+
Sbjct: 74 MPDRNIISWNGLVSGYMKNGEIDEARKVFDLMP----ERNVVSWTALVKGYVHNGKVDVA 129
Query: 268 LGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEG 327
+ +M EK + ++ +++ D R +DA + L++M+ + D++ +++ G
Sbjct: 130 ESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDACK-LYEMIPDK---DNIARTSMIHG 181
Query: 328 LCRERRADEAFDLLDECKKRDI 349
LC+E R DEA ++ DE +R +
Sbjct: 182 LCKEGRVDEAREIFDEMSERSV 203
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 9/142 (6%)
Query: 212 DTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGC-EPNAYSYSYIARGLCEKGRVNQGLGF 270
D + N II Y+ +EA++VF EM L G +PN ++ G V +GL
Sbjct: 396 DIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKI 455
Query: 271 YKEMKEK-CLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLC 329
Y+ M+ ++P T+ Y +V L RF +A+E++ M + PD + ++L G C
Sbjct: 456 YESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSM---TVEPDAAVWGSLL-GAC 511
Query: 330 RERRADEAFDLLDECKKRDISM 351
R D+ + C K+ I +
Sbjct: 512 ---RTHSQLDVAEFCAKKLIEI 530
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 112/271 (41%), Gaps = 14/271 (5%)
Query: 82 LDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIR 141
L++FRW +QR Y + Y +I + + + A L E+ C +YN++I
Sbjct: 117 LEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALIT 176
Query: 142 ---FCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVR 198
+ + +KM E C+P++ TY N LLR F + + V
Sbjct: 177 AHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTY----NILLRAFAQSG----KVDQVN 228
Query: 199 SLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGL 258
+L K + V PD + N ++ AY K + E V M C+P+ +++ +
Sbjct: 229 ALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSY 288
Query: 259 CEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDH 318
+K + +K + +P+ T+ ++ + R + A V M + P
Sbjct: 289 GKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSF 348
Query: 319 LTYK--TVLEGLCRE-RRADEAFDLLDECKK 346
+TY+ ++ G C RA E F+ + E +
Sbjct: 349 ITYECMIMMYGYCGSVSRAREIFEEVGESDR 379
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 98/243 (40%), Gaps = 13/243 (5%)
Query: 124 VIAGACDGSIPLYNSIIRFCC--GRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLL 181
++ G C N++I C GR A V + M+ + C PD T + LL
Sbjct: 438 MLQGDCRPDEYTLNTVINGLCKMGR---VDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLL 494
Query: 182 RRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGL 241
+ A+ L + M + P N +I+ K + DEA+ VF ++
Sbjct: 495 AQGRAEE-------ALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEK 547
Query: 242 YGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFED 301
++ +Y+ I GLC +V+ F+ ++ R Y + L D
Sbjct: 548 ASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSD 607
Query: 302 AIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
A L+D+ + P+ + Y TV+ R EA+ +L+E +K + ++ +LD
Sbjct: 608 ACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWR-ILD 666
Query: 362 DLH 364
LH
Sbjct: 667 KLH 669
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 83/198 (41%), Gaps = 10/198 (5%)
Query: 168 PDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCL 227
P TY LL SL + + R++ + M T + N+ ++
Sbjct: 375 PSEYTYKLLMESLCKELDT--------GKARNVLELMLRKEGADRTRIYNIYLRGLCVMD 426
Query: 228 EVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKE-MKEKCLRPSTSTY 286
E + V M C P+ Y+ + + GLC+ GRV+ + + M K P T
Sbjct: 427 NPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTL 486
Query: 287 VIIVCSLAMDRRFEDAIEVLFDMLG-NSRSPDHLTYKTVLEGLCRERRADEAFDLLDECK 345
++C L R E+A++VL ++ N P + Y V+ GL + + DEA + + +
Sbjct: 487 NTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLE 546
Query: 346 KRDISMSEKMYKTLLDDL 363
K ++ Y ++D L
Sbjct: 547 KASVTADSTTYAIIIDGL 564
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 130/343 (37%), Gaps = 72/343 (20%)
Query: 77 DPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIP-- 134
+PD AL I R Y LN ++I L R+ +A +A G IP
Sbjct: 70 NPDEALRILDGLCL-RGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLAS---GFIPDE 125
Query: 135 -LYNSIIRFCCGRKFLFSRA----FDVYNKMLR-SEDCKPDLETYTLLYNSLLRRFNKLH 188
N II + L+SR+ V ++++ ++ P L Y L N L
Sbjct: 126 RTCNVIIA-----RLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQL-------- 172
Query: 189 VCYVY-LHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPN 247
C +Y + L M+ G +PD +I Y + E++ A +VF EM + G PN
Sbjct: 173 -CTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPN 231
Query: 248 AYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTST---------------------- 285
+ + S + G + V G KE+ E ++ T T
Sbjct: 232 SLTLSVLIGGFLKMRDVETGRKLMKELWEY-MKNETDTSMKAAAFANLVDSMCREGYFND 290
Query: 286 -------------------YVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLE 326
Y ++ SL RR A +++ M P +Y ++
Sbjct: 291 IFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIH 350
Query: 327 GLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCRE 369
GLC++ A+ LL+E + + SE YK L++ L C+E
Sbjct: 351 GLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESL---CKE 390
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 78/198 (39%), Gaps = 9/198 (4%)
Query: 146 RKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMK 205
R+ F+ F++ M E + Y + +SL R Y H + MK
Sbjct: 284 REGYFNDIFEIAENMSLCESVNVEF-AYGHMIDSLCR--------YRRNHGAARIVYIMK 334
Query: 206 AVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVN 265
+ G+ P N II K A ++ E + P+ Y+Y + LC++
Sbjct: 335 SKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTG 394
Query: 266 QGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVL 325
+ + M K T Y I + L + + + VL ML PD T TV+
Sbjct: 395 KARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVI 454
Query: 326 EGLCRERRADEAFDLLDE 343
GLC+ R D+A +LD+
Sbjct: 455 NGLCKMGRVDDAMKVLDD 472
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 97/241 (40%), Gaps = 35/241 (14%)
Query: 91 QRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLF 150
Q T+ L I+ +L + ++QA +V V Y+ R +F++
Sbjct: 210 QSGLQFTEDQMLKIVDRLGRKQSWKQASAVVHWV-----------YSDKKRKHLRSRFVY 258
Query: 151 SR-------------AFDVYNKMLRSEDCKPDLETY-----TLLYNSLLRRFNKLHVCYV 192
++ A ++N+ML PD+ Y TL LL+ L V
Sbjct: 259 TKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKEL--LKVIER 316
Query: 193 YLHAVRSLTKQMKAVG----VIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNA 248
LTK ++ + PD V N I+ A L+ VF E+ G PN
Sbjct: 317 MRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNG 376
Query: 249 YSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFD 308
+Y + E G+ ++ F+++MK P TY ++V +L + + E+A+E + D
Sbjct: 377 ATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRD 436
Query: 309 M 309
M
Sbjct: 437 M 437
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 99/231 (42%), Gaps = 28/231 (12%)
Query: 90 QQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCC----- 144
++R + + Y ++ L RR Q+A + +++ G LY + + C
Sbjct: 247 KKRKHLRSRFVYTKLLSVLGFARRPQEALQIFNQML-----GDRQLYPDMAAYHCIAVTL 301
Query: 145 GRKFLFSRAFDVYNKM----------LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYL 194
G+ L V +M LR ++ P LE ++YN++L + C L
Sbjct: 302 GQAGLLKELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAIL------NACVPTL 355
Query: 195 H--AVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYS 252
AV + +++ G+ P+ + ++ + + D F +M G P A +Y
Sbjct: 356 QWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYK 415
Query: 253 YIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAI 303
+ R L +G++ + + ++M++K + + S Y + C L + R+ DA+
Sbjct: 416 VLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAM 466
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 112/271 (41%), Gaps = 14/271 (5%)
Query: 82 LDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIR 141
L++FRW +QR Y + Y +I + + + A L E+ C +YN++I
Sbjct: 117 LEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALIT 176
Query: 142 ---FCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVR 198
+ + +KM E C+P++ TY N LLR F + + V
Sbjct: 177 AHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTY----NILLRAFAQSG----KVDQVN 228
Query: 199 SLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGL 258
+L K + V PD + N ++ AY K + E V M C+P+ +++ +
Sbjct: 229 ALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSY 288
Query: 259 CEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDH 318
+K + +K + +P+ T+ ++ + R + A V M + P
Sbjct: 289 GKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSF 348
Query: 319 LTYK--TVLEGLCRE-RRADEAFDLLDECKK 346
+TY+ ++ G C RA E F+ + E +
Sbjct: 349 ITYECMIMMYGYCGSVSRAREIFEEVGESDR 379
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 124/302 (41%), Gaps = 12/302 (3%)
Query: 66 SDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLT--IIKQLNAGRRYQQAETLVEE 123
S L DPD AL I+ S + Y +++L RR+ ETL+E
Sbjct: 34 SKAKSTLRKEHDPDKALKIY-ANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIES 92
Query: 124 VIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRR 183
P Y+++IR G+ +F+ A + +M + + + ++ L N+ L
Sbjct: 93 HKNDPKIKEEPFYSTLIR-SYGQASMFNHAMRTFEQMDQYGTPRSAV-SFNALLNACLHS 150
Query: 184 FNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYG 243
N V ++ + K +IPD ++IK+Y ++AI + +M G
Sbjct: 151 KNFDKVPQLFDEIPQRYNK------IIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKG 204
Query: 244 CEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAI 303
E +++ I L +KG + + EM +K + Y + + S A E
Sbjct: 205 MEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMS-AQKESPERVK 263
Query: 304 EVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
E++ +M PD ++Y ++ C DEA + + + + + + ++TL+ L
Sbjct: 264 ELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHL 323
Query: 364 HY 365
Y
Sbjct: 324 CY 325
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/274 (18%), Positives = 117/274 (42%), Gaps = 52/274 (18%)
Query: 114 YQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDV----YNKMLRSEDCKPD 169
++ A+ + EE+ C S+ +N+++ + S+ FDV +N++ KPD
Sbjct: 125 FENAQKVFEEMPNRDCKRSVLSFNALLS-----AYRLSKKFDVVEELFNELPGKLSIKPD 179
Query: 170 LETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMII--------- 220
+ +Y L +L + + L +L +++ G+ PD N ++
Sbjct: 180 IVSYNTLIKALCEKDS--------LPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQF 231
Query: 221 --------KAYSKCLEVD------------------EAIRVFHEMGLYGCEPNAYSYSYI 254
K K + +D E + +F E+ G +P+ +S++ +
Sbjct: 232 ELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAM 291
Query: 255 ARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSR 314
RG +G++++ +YKE+ + RP +T+ +++ ++ FE AIE+ +
Sbjct: 292 IRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRY 351
Query: 315 SPDHLTYKTVLEGLCRERRADEAFDLLDECKKRD 348
T + +++ L + + +EA +++ K D
Sbjct: 352 LVGQTTLQQLVDELVKGSKREEAEEIVKIAKTND 385
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 121/278 (43%), Gaps = 17/278 (6%)
Query: 66 SDVDRALTSV----SDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLV 121
S ++LTS+ +P ++ F+ + + Y +++L A +R E ++
Sbjct: 38 SPPQKSLTSLVNGERNPKRIVEKFKKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEIL 97
Query: 122 EEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNS-- 179
EE D S + + I G+ +F A V+ +M + DCK + ++ L ++
Sbjct: 98 EEQ-KKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEM-PNRDCKRSVLSFNALLSAYR 155
Query: 180 LLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEM 239
L ++F+ + + L + + PD N +IKA + + EA+ + E+
Sbjct: 156 LSKKFDVVEELFNELPG---------KLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEI 206
Query: 240 GLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRF 299
G +P+ +++ + KG+ G + +M EK + TY + LA + +
Sbjct: 207 ENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKS 266
Query: 300 EDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEA 337
++ + + ++ + PD ++ ++ G E + DEA
Sbjct: 267 KELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEA 304
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 122/301 (40%), Gaps = 19/301 (6%)
Query: 72 LTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDG 131
L S DPD L+I R + + + ++ L + + L++ I D
Sbjct: 54 LKSEKDPDRILEICRAASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDL 113
Query: 132 SIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKL-HVC 190
RF L+++A N + S DLE + + + ++ N L C
Sbjct: 114 KSE------RFAAHAIVLYAQA----NMLDHSLRVFRDLEKFEI--SRTVKSLNALLFAC 161
Query: 191 YV---YLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPN 247
V Y A R + K G+ PD N +IK + + + + EM G +PN
Sbjct: 162 LVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPN 221
Query: 248 AYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLF 307
+ S+ + G + + ++ MK++ + STY I + SL ++ ++A +L
Sbjct: 222 SSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLD 281
Query: 308 DMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVC 367
ML P+ +TY ++ G C E +EA L R + Y TL ++Y+C
Sbjct: 282 GMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTL---IYYLC 338
Query: 368 R 368
+
Sbjct: 339 K 339
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 94/222 (42%), Gaps = 8/222 (3%)
Query: 142 FCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLT 201
F C + A VY +M + +PDLETY R K+ + S+
Sbjct: 159 FACLVAKDYKEAKRVYIEMPKMYGIEPDLETYN--------RMIKVFCESGSASSSYSIV 210
Query: 202 KQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEK 261
+M+ G+ P++ ++I + + DE +V M G +Y+ + LC++
Sbjct: 211 AEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKR 270
Query: 262 GRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTY 321
+ + M ++P+T TY ++ + FE+A ++ M+ PD Y
Sbjct: 271 KKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECY 330
Query: 322 KTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
T++ LC+ + A L E +++ S + K+L++ L
Sbjct: 331 FTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGL 372
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 67/144 (46%)
Query: 204 MKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGR 263
MK GV N+ I++ K + EA + M G +PN +YS++ G C +
Sbjct: 248 MKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDD 307
Query: 264 VNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKT 323
+ +K M + +P + Y ++ L FE A+ + + + + P K+
Sbjct: 308 FEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKS 367
Query: 324 VLEGLCRERRADEAFDLLDECKKR 347
++ GL ++ + +EA +L+ + K++
Sbjct: 368 LVNGLAKDSKVEEAKELIGQVKEK 391
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 76/173 (43%), Gaps = 7/173 (4%)
Query: 198 RSLTKQMKAVGVIPDTFVLNMIIKAY-------SKCLEVDEAIRVFHEMGLYGCEPNAYS 250
R + + MK+ G+ PD F N ++ + V EA+ + EM Y +P + S
Sbjct: 228 RRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMS 287
Query: 251 YSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDML 310
Y+ + L RV + ++MK P T +Y +V L + RF +++ +M+
Sbjct: 288 YNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMI 347
Query: 311 GNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
P+ Y ++ LC R + A L ++ K+ + ++Y L+ L
Sbjct: 348 ERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKL 400
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 85/192 (44%), Gaps = 1/192 (0%)
Query: 161 LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMII 220
++S PDL + L L R + + A+ ++ +M++ + P + N+++
Sbjct: 234 MKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEAL-NIMLEMRSYKIQPTSMSYNILL 292
Query: 221 KAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLR 280
+ V E+ ++ +M GC+P+ SY ++ R L GR +G EM E+ R
Sbjct: 293 SCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFR 352
Query: 281 PSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDL 340
P Y ++ L R A+++ M +S Y ++ LC+ ++ +L
Sbjct: 353 PERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGREL 412
Query: 341 LDECKKRDISMS 352
+E D+++S
Sbjct: 413 WEEALSIDVTLS 424
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Query: 212 DTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFY 271
D +++ + K + ++AI +F + + C + ++ + I LC +G V + LG
Sbjct: 137 DKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVM 196
Query: 272 KEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRE 331
K+ S Y ++ ++ R ++A V+ DM +PD + ++L LC E
Sbjct: 197 HHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLC-E 255
Query: 332 RRAD--------EAFDLLDECKKRDISMSEKMYKTLL 360
R + EA +++ E + I + Y LL
Sbjct: 256 RNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILL 292
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 33/216 (15%)
Query: 102 LTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFC--CGR----KFLFSR--- 152
L ++ + G R Q T+V + D +IP+ NS+I CG + LF +
Sbjct: 201 LGVLAEEGVGGRGLQVHTVV---VKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEV 257
Query: 153 -AFDVYNKMLRSEDCKP-DLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAV--- 207
+ +N M+ DLE + Y+ R N + + +V L +K +
Sbjct: 258 KSVVTWNSMISGYAANGLDLEALGMFYS---MRLNYVRLSESSFASVIKLCANLKELRFT 314
Query: 208 ----------GVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARG 257
G + D + ++ AYSKC + +A+R+F E+G C N S++ + G
Sbjct: 315 EQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIG---CVGNVVSWTAMISG 371
Query: 258 LCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSL 293
+ + + + EMK K +RP+ TY +I+ +L
Sbjct: 372 FLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL 407
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 121/270 (44%), Gaps = 18/270 (6%)
Query: 99 LNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYN 158
+ Y +I + AE + +E++ + + +Y +I F+ +V
Sbjct: 576 IPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLIN-------AFADTGNVQQ 628
Query: 159 KMLRSEDCK-PDLETYTLLYNSLLRRFNKL----HVCYVYLHAVRSLTKQMKAVGVIPDT 213
M E K + +++YNSL++ + K+ +Y ++S K PD
Sbjct: 629 AMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQ-----YPDV 683
Query: 214 FVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKE 273
+ N +I YS+ V +A +F M G E N ++++ + + GR + K+
Sbjct: 684 YTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQ 742
Query: 274 MKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERR 333
M+E + +Y ++ A+D RF++A+E +M+ + PD T+K++ L +
Sbjct: 743 MREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGM 802
Query: 334 ADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
+ +A ++E +K++I +++ + L L
Sbjct: 803 SKKAVRKIEEIRKKEIKRGLELWISTLSSL 832
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 108/273 (39%), Gaps = 5/273 (1%)
Query: 81 ALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSII 140
A++IF W + Y ++Y +++ L +++ ++L +E+I Y ++I
Sbjct: 170 AVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLI 229
Query: 141 RFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSL 200
+ L A KM + +PD E T + + ++ + + S
Sbjct: 230 DVY-SKGGLKVHALCWLGKMSKI-GMQPD-EVTTGIVLQMYKKAREFQKAEEFFKK-WSC 285
Query: 201 TKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCE 260
+ V ++ N +I Y K ++ EA F M G P +++ +
Sbjct: 286 DENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGN 345
Query: 261 KGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLT 320
G++ + K MK C P T TY I++ + E A +M + PD ++
Sbjct: 346 NGQLGEVTSLMKTMKLHCA-PDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVS 404
Query: 321 YKTVLEGLCRERRADEAFDLLDECKKRDISMSE 353
Y+T+L +EA L+ E ++ + E
Sbjct: 405 YRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDE 437
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Query: 202 KQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEK 261
K+MK G+IP+ + + K V EA+++F M G P Y+ + C+
Sbjct: 123 KKMKEGGLIPNAVAM---LDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKA 179
Query: 262 GRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTY 321
++ +++M+ + P+ +Y ++V L +DA+ +ML + SP+ T+
Sbjct: 180 HKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTF 239
Query: 322 KTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
+++ LCR + ++A +D ++ +++ K K +D
Sbjct: 240 VELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMD 279
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Query: 202 KQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEK 261
K+MK G+IP+ + + K V EA+++F M G P Y+ + C+
Sbjct: 123 KKMKEGGLIPNAVAM---LDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKA 179
Query: 262 GRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTY 321
++ +++M+ + P+ +Y ++V L +DA+ +ML + SP+ T+
Sbjct: 180 HKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTF 239
Query: 322 KTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLD 361
+++ LCR + ++A +D ++ +++ K K +D
Sbjct: 240 VELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMD 279
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 101/235 (42%), Gaps = 32/235 (13%)
Query: 87 WTAQQRSYNHTDLNYL-TIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCG 145
W + NH +++ + +I+ L ++ Q+A L +++A C + NS I
Sbjct: 244 WVETRAELNHMNIDSIGKVIELLCLDQKVQEARVLARKLVALGC-----ILNSSI----- 293
Query: 146 RKFLFSRAFDVYNKMLRSEDC---------KPDLETYTLLYNSLLRRFNKLHVCYVYLHA 196
+S+ YN+ ED +PD+ + +SL RRF YVY+
Sbjct: 294 ----YSKITIGYNEKQDFEDLLSFIGEVKYEPDVFVGNRILHSLCRRFGS-ERAYVYM-- 346
Query: 197 VRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIAR 256
++++ +G D ++I ++ A+ E+ G +P+ YSY+ I
Sbjct: 347 -----EELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILS 401
Query: 257 GLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLG 311
GL KG EMKE + S ST+ I+V R+FE+A ++ M G
Sbjct: 402 GLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMFG 456
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 106/292 (36%), Gaps = 43/292 (14%)
Query: 111 GRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDL 170
G + + E ++ ++ S+ Y +R C S A + +L E +
Sbjct: 851 GNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLS-AISLKEFLLLGESNPGGV 909
Query: 171 ETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVD 230
Y +L + R N L V V L +M+ GV+PD N ++ YS +
Sbjct: 910 IIYNMLIFYMFRAKNHLEVNKVLL--------EMQGRGVLPDETTFNFLVHGYSSSADYS 961
Query: 231 EAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTST----- 285
++R M G +PN S + LC+ G V + L ++ M+ K +S
Sbjct: 962 SSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKI 1021
Query: 286 -----------------------------YVIIVCSLAMDRRFEDAIEVLFDMLGNSRSP 316
Y I+ L+ + A+ +L ML N P
Sbjct: 1022 VETLISKGEIPKAEDFLTRVTRNGMMAPNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIP 1081
Query: 317 DHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCR 368
+Y +V+ GL R + D+A D E + +S S + L+ C+
Sbjct: 1082 GSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQ 1133
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
IIK S +D A+ + + M P + SY + GL ++++ + F+ EM E
Sbjct: 1054 IIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELG 1113
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRER---RAD 335
L PS ST+ +V + ++ ++ M+G SP +KTV++ E+ +A
Sbjct: 1114 LSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKNTVKAS 1173
Query: 336 EAFDLLDEC 344
E +++ +C
Sbjct: 1174 EMMEMMQKC 1182
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 105/239 (43%), Gaps = 14/239 (5%)
Query: 114 YQQAETLVEEVIAGACDGSIPLYNSIIRFCC--GRKFLFSRAFDVYNKMLRSEDCKPDLE 171
Y +A L+ E+ +Y +++ C GR S + + + ++ E P++
Sbjct: 218 YPKAIELIGELPHNGIQMDSVMYGTVLAICASNGR----SEEAENFIQQMKVEGHSPNIY 273
Query: 172 TYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDE 231
Y+ L NS + + Y A +T +MK++G++P+ ++ ++K Y K D
Sbjct: 274 HYSSLLNSYSWKGD-------YKKADELMT-EMKSIGLVPNKVMMTTLLKVYIKGGLFDR 325
Query: 232 AIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVC 291
+ + E+ G N Y + GL + G++ + + +MK K +R I++
Sbjct: 326 SRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMIS 385
Query: 292 SLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDIS 350
+L +RF++A E+ D D + T+L CR + ++ + ++ +S
Sbjct: 386 ALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVS 444
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 55/115 (47%)
Query: 196 AVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIA 255
A + MK VG+ P +I Y E+D+A +F EM + G PN ++Y+ +
Sbjct: 707 AALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI 766
Query: 256 RGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDML 310
RGLC G + KEM+ + P+ Y +V L + +A +V+ +M+
Sbjct: 767 RGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMV 821
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/274 (18%), Positives = 111/274 (40%), Gaps = 10/274 (3%)
Query: 83 DIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRF 142
D F W Q SY + + Y +++ + + AE E++ C+ +++
Sbjct: 173 DFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTML-- 230
Query: 143 CCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTK 202
C ++ A + K ++ Y + +SL ++ V ++L V
Sbjct: 231 CTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEE--- 287
Query: 203 QMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKG 262
GV P+ F +++ +Y+K +EA++ F EM G P +YS + + G
Sbjct: 288 -----GVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAG 342
Query: 263 RVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYK 322
+ +G Y++M+ + + PS T ++ + A+ + DM N D +
Sbjct: 343 DWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRG 402
Query: 323 TVLEGLCRERRADEAFDLLDECKKRDISMSEKMY 356
++ + +A + +E ++ ++ EK Y
Sbjct: 403 LIIRIYGKLGLFHDAQSMFEETERLNLLADEKTY 436
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 4/181 (2%)
Query: 169 DLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLE 228
++E T+ YN+L++ + L + ++M GV N +I Y + L+
Sbjct: 769 NIELDTVGYNTLIKAMLEAG----KLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQ 824
Query: 229 VDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVI 288
+D+AI +F G + Y+ + + G++++ L + EM++K ++P T +Y +
Sbjct: 825 LDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNM 884
Query: 289 IVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRD 348
+V A R + E+L M N R D TY T+++ + EA + K++
Sbjct: 885 MVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKG 944
Query: 349 I 349
I
Sbjct: 945 I 945
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 66/150 (44%)
Query: 211 PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGF 270
P V ++++ Y + ++ A F EM GCEP+A + + GR + L F
Sbjct: 186 PSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTF 245
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
YK ++E+ + STS Y ++ SL I++ +M+ P+ TY V+ +
Sbjct: 246 YKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAK 305
Query: 331 ERRADEAFDLLDECKKRDISMSEKMYKTLL 360
+ +EA E K E Y +++
Sbjct: 306 QGFKEEALKAFGEMKSLGFVPEEVTYSSVI 335
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 75/156 (48%), Gaps = 4/156 (2%)
Query: 211 PDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGF 270
P V+ +I AY +C +++A +F E GC+P A + S + L +G+ +
Sbjct: 702 PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHI 761
Query: 271 YKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHL-TYKTVLEGLC 329
+ EK + T Y ++ ++ + + A E+ ++ + S P + TY T++
Sbjct: 762 SRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEI-YERMHTSGVPCSIQTYNTMISVYG 820
Query: 330 RERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHY 365
R + D+A ++ ++ + + EK+Y ++ +HY
Sbjct: 821 RGLQLDKAIEIFSNARRSGLYLDEKIYTNMI--MHY 854
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 105/257 (40%), Gaps = 9/257 (3%)
Query: 104 IIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRS 163
++ L + R++Q+A L++E+ YN IR FL + A D K+
Sbjct: 292 LVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPA-DFLQKISPL 350
Query: 164 EDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAY 223
E C+ ++ Y + LL+ N L V + +M GV P+ +N + +
Sbjct: 351 EGCELEVFRYNSMVFQLLKENN--------LDGVYDILTEMMVRGVSPNKKTMNAALCFF 402
Query: 224 SKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPST 283
K VDEA+ ++ G P A SY+Y+ LC V Q K ++
Sbjct: 403 CKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGG 462
Query: 284 STYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDE 343
T+ + +L + + A E++ P + ++ LC + ++A + +
Sbjct: 463 KTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINEL 522
Query: 344 CKKRDISMSEKMYKTLL 360
K + S KM+ +L+
Sbjct: 523 FNKSGVDTSFKMFTSLI 539
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 91/207 (43%), Gaps = 25/207 (12%)
Query: 136 YNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYN-SLLRRFNKLHVCYVYL 194
YN II C + F A +++ +L S +PD++TY ++ S L R KL+
Sbjct: 17 YNIIIHGLC-KAGKFDEAGNIFTNLLIS-GLQPDVQTYNMMIRFSSLGRAEKLYA----- 69
Query: 195 HAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYI 254
+M G++PDT N +I K ++ +A +V + +++ +
Sbjct: 70 --------EMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCSTFNTL 112
Query: 255 ARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSR 314
G C+ RV G+ + EM + + + TY ++ F A+++ +M+ N
Sbjct: 113 INGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGV 172
Query: 315 SPDHLTYKTVLEGLCRERRADEAFDLL 341
+T++ +L LC + +A +L
Sbjct: 173 YSSSITFRDILPQLCSRKELRKAVAML 199
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 13/165 (7%)
Query: 202 KQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEK 261
K M+ + DT N+II K + DEA +F + + G +P+ +Y+ + R
Sbjct: 3 KVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSL 61
Query: 262 GRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTY 321
GR + Y EM + L P T TY ++ L + A +V S T+
Sbjct: 62 GRAEK---LYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCSTF 109
Query: 322 KTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYV 366
T++ G C+ R + +L E +R I + Y TL+ V
Sbjct: 110 NTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQV 154
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 81/207 (39%), Gaps = 23/207 (11%)
Query: 101 YLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKM 160
Y II L ++ +A + ++ + YN +IRF RA +Y +M
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSS-----LGRAEKLYAEM 71
Query: 161 LRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMII 220
+R PD T+ YNS+ +H + K +A V N +I
Sbjct: 72 IR-RGLVPD----TITYNSM-------------IHGLCKQNKLAQARKVSKSCSTFNTLI 113
Query: 221 KAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLR 280
Y K V + + +F EM G N +Y+ + G + G N L ++EM +
Sbjct: 114 NGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVY 173
Query: 281 PSTSTYVIIVCSLAMDRRFEDAIEVLF 307
S+ T+ I+ L + A+ +L
Sbjct: 174 SSSITFRDILPQLCSRKELRKAVAMLL 200
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 177 YNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVF 236
YN+LL + K + RS+ K+MK PD + N++I Y + +DE V
Sbjct: 771 YNTLLDAYGKDK----QMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVL 826
Query: 237 HEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMD 296
E+ G P+ SY+ + + G V + +G KEM+ + + P TY +V +L +
Sbjct: 827 KELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRN 886
Query: 297 RRFEDAIE 304
F +AI+
Sbjct: 887 DEFLEAIK 894
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 98/233 (42%), Gaps = 31/233 (13%)
Query: 135 LYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYN-----SLLRRFNKLH- 188
+YN +I CC R + +M+R P+ T+ +L + L ++ N+L
Sbjct: 666 MYNCVIN-CCARALPLDELSGTFEEMIRY-GFTPNTVTFNVLLDVYGKAKLFKKVNELFL 723
Query: 189 ----------VCYVYLHA----------VRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLE 228
+ Y + A + S K M+ G N ++ AY K +
Sbjct: 724 LAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQ 783
Query: 229 VDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVI 288
+++ + M P+ Y+Y+ + E+G +++ KE+KE L P +Y
Sbjct: 784 MEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNT 843
Query: 289 IVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLL 341
++ + + E+A+ ++ +M G + PD +TY ++ L RR DE + +
Sbjct: 844 LIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTAL---RRNDEFLEAI 893
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 73/163 (44%), Gaps = 9/163 (5%)
Query: 149 LFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVG 208
L+ +A +V + +++ + + LE + ++ N+ ++ + S+ M+A G
Sbjct: 294 LYDKAEEVID-LMKQDRVRLKLENWLVMLNAYSQQGK--------MELAESILVSMEAAG 344
Query: 209 VIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGL 268
P+ N +I Y K +++ A +FH + G EP+ SY + G +
Sbjct: 345 FSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAK 404
Query: 269 GFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLG 311
+Y+E+K +P++ ++ A + AI+ + DM G
Sbjct: 405 HYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTG 447
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 6/176 (3%)
Query: 196 AVRSLTKQMKAVGVIPDTFVLNMIIKAYS---KCLEVDEAIRVFHEMGLYGCEPNAYSYS 252
AV++L K MK +G+ P T N +IK Y K E + + E G PN +++
Sbjct: 134 AVQALLK-MKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFN 192
Query: 253 YIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTY-VIIVCSLAMDRRFEDAIEVLFDMLG 311
+ + C+K +V + K+M+E +RP T TY I C + EV+ M+
Sbjct: 193 VLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVM 252
Query: 312 NSRS-PDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYV 366
++ P+ T V+ G CRE R + + K+ + + ++ +L++ V
Sbjct: 253 KEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEV 308
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Query: 204 MKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGR 263
MK V D + ++ A+S +++A +VF EM G +P+A++YS +A+G
Sbjct: 346 MKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKE 405
Query: 264 VNQGLGFYKEMKEKCL---RPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLT 320
+ +E+ E + RP+ + ++ + +DA+ V M SP+ T
Sbjct: 406 PKKA----EELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKT 461
Query: 321 YKTVLEG---LCRERRADEAFDLLDEC 344
++T++ G + + +A+E ++ C
Sbjct: 462 FETLMWGYLEVKQPWKAEEVLQMMRGC 488
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 88/200 (44%), Gaps = 11/200 (5%)
Query: 160 MLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMI 219
+++ + K D+ TY+ + N+ Y+ + K+M GV PD +++
Sbjct: 345 LMKECNVKADVITYSTVMNAW--------SSAGYMEKAAQVFKEMVKAGVKPDAHAYSIL 396
Query: 220 IKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCL 279
K Y + E +A + + + PN ++ + G C G ++ + + +M + +
Sbjct: 397 AKGYVRAKEPKKAEELLETL-IVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGV 455
Query: 280 RPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFD 339
P+ T+ ++ ++ A EVL M G P++ T+ + E DE+
Sbjct: 456 SPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNK 515
Query: 340 LLDECKKRDISMS--EKMYK 357
++ K +DI ++ EK+Y+
Sbjct: 516 AINALKCKDIEIAKLEKLYQ 535
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 6/176 (3%)
Query: 196 AVRSLTKQMKAVGVIPDTFVLNMIIKAYS---KCLEVDEAIRVFHEMGLYGCEPNAYSYS 252
AV++L K MK +G+ P T N +IK Y K E + + E G PN +++
Sbjct: 134 AVQALLK-MKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFN 192
Query: 253 YIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTY-VIIVCSLAMDRRFEDAIEVLFDMLG 311
+ + C+K +V + K+M+E +RP T TY I C + EV+ M+
Sbjct: 193 VLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVM 252
Query: 312 NSRS-PDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYV 366
++ P+ T V+ G CRE R + + K+ + + ++ +L++ V
Sbjct: 253 KEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEV 308
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 125/300 (41%), Gaps = 39/300 (13%)
Query: 95 NHTDLNYLTIIKQLN-AGRRYQQAETLVEEVIAGACD--GSIPLYNSIIRFCCGRKFLFS 151
N T Y T+IK AG+ + +E L + G D +I +N +++ C +K +
Sbjct: 147 NPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKV-E 205
Query: 152 RAFDVYNKMLRSEDC--KPDLETYTLLYNSLLRRFNKLHV-------------------- 189
A++V KM E+C +PD TY + +++ +
Sbjct: 206 EAWEVVKKM---EECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRT 262
Query: 190 CYVYLHA------VRS---LTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMG 240
C + + VR ++MK + V + V N +I + + ++ D V M
Sbjct: 263 CGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMK 322
Query: 241 LYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFE 300
+ + +YS + G + + +KEM + ++P Y I+ + +
Sbjct: 323 ECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPK 382
Query: 301 DAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLL 360
A E+L ++ SR P+ + + TV+ G C D+A + ++ K +S + K ++TL+
Sbjct: 383 KAEELLETLIVESR-PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLM 441
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 170 LETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEV 229
+E +++NSL+ F V + + + MK V D + ++ A+S +
Sbjct: 291 VEANLVVFNSLINGF----VEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYM 346
Query: 230 DEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCL---RPSTSTY 286
++A +VF EM G +P+A++YS +A+G + +E+ E + RP+ +
Sbjct: 347 EKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKA----EELLETLIVESRPNVVIF 402
Query: 287 VIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEG---LCRERRADEAFDLLDE 343
++ + +DA+ V M SP+ T++T++ G + + +A+E ++
Sbjct: 403 TTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRG 462
Query: 344 C 344
C
Sbjct: 463 C 463
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 88/200 (44%), Gaps = 11/200 (5%)
Query: 160 MLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMI 219
+++ + K D+ TY+ + N+ Y+ + K+M GV PD +++
Sbjct: 320 LMKECNVKADVITYSTVMNAWSSAG--------YMEKAAQVFKEMVKAGVKPDAHAYSIL 371
Query: 220 IKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCL 279
K Y + E +A + + + PN ++ + G C G ++ + + +M + +
Sbjct: 372 AKGYVRAKEPKKAEELLETL-IVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGV 430
Query: 280 RPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFD 339
P+ T+ ++ ++ A EVL M G P++ T+ + E DE+
Sbjct: 431 SPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNK 490
Query: 340 LLDECKKRDISMS--EKMYK 357
++ K +DI ++ EK+Y+
Sbjct: 491 AINALKCKDIEIAKLEKLYQ 510
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 114/285 (40%), Gaps = 79/285 (27%)
Query: 152 RAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIP 211
+A D++NKM++ C P+L TYT SL++ F L + + ++ ++++ G+ P
Sbjct: 265 KAVDLFNKMIQI-GCSPNLVTYT----SLIKGFVDLGM----VDEAFTVLSKVQSEGLAP 315
Query: 212 DTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKG------RVN 265
D + N++I Y++ +EA +VF + P+ Y+++ I LC G R+
Sbjct: 316 DIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRIT 375
Query: 266 QGLGF-------------------------------YKEMKEKCL--------------- 279
G+G YK+ C
Sbjct: 376 HGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAP 435
Query: 280 RPSTSTYVIIVCSLA-MDRRFEDAIEVLFDMLGNSRSPDHL--------------TYKTV 324
R + Y II+ +D F AI LG + HL +Y
Sbjct: 436 RAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVA 495
Query: 325 LEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYVCRE 369
++GL R +R +EA+ L + K+ I + + Y+T++ L C+E
Sbjct: 496 IKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGL---CKE 537
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 66/137 (48%), Gaps = 10/137 (7%)
Query: 204 MKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGR 263
M G+ V +M++ + + E +A+ +F++M GC PN +Y+ + +G + G
Sbjct: 238 MICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGM 297
Query: 264 VNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDR-----RFEDAIEVLFDMLGNSRSPDH 318
V++ +++ + L P I++C+L + RFE+A +V + PD
Sbjct: 298 VDEAFTVLSKVQSEGLAPD-----IVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQ 352
Query: 319 LTYKTVLEGLCRERRAD 335
T+ ++L LC + D
Sbjct: 353 YTFASILSSLCLSGKFD 369
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 51/105 (48%)
Query: 247 NAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVL 306
+A+ +S I L E G+ N + +K + +Y + + L +R E+A +
Sbjct: 453 DAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLC 512
Query: 307 FDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISM 351
DM P+ TY+T++ GLC+E+ ++ +L EC + + +
Sbjct: 513 CDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVEL 557
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 2/156 (1%)
Query: 194 LHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEM-GLYGCEPNAYSYS 252
L A L +Q P F N II A + E+I +F PN SY+
Sbjct: 161 LDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYN 220
Query: 253 YIARGLCEKGRVNQGLGFYKE-MKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLG 311
I C++G V++ L Y+ + PS+ TY + L R DA +L +ML
Sbjct: 221 QIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLS 280
Query: 312 NSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKR 347
++ D Y ++ G D+A + DE K +
Sbjct: 281 KGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSK 316
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 87/201 (43%), Gaps = 21/201 (10%)
Query: 143 CCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLY----NSLLRRFNKLHVCYVYLHAVR 198
C R + + D + +M + + K D L N L R F K+ C V +
Sbjct: 91 ACARNGYYQESLDFFREMYK-DGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYE 149
Query: 199 SLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGL 258
S D F+++ +I YSK EV A +VF ++G E + ++ + G
Sbjct: 150 S------------DAFIVSSLIDMYSKFGEVGNARKVFSDLG----EQDLVVFNAMISGY 193
Query: 259 CEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDH 318
+ ++ L K+MK ++P T+ ++ + R E E+L M + PD
Sbjct: 194 ANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDV 253
Query: 319 LTYKTVLEGLCRERRADEAFD 339
+++ +++ GL + ++AFD
Sbjct: 254 VSWTSIISGLVHNFQNEKAFD 274
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 111/281 (39%), Gaps = 50/281 (17%)
Query: 92 RSYNHTDLNYLTIIKQ-LNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLF 150
R+ + ++ Y T++ +NAG + + L E G I YN +++ C ++
Sbjct: 446 RNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRI-TYNVLLKGYC-KQLQI 503
Query: 151 SRAFDVYNKMLRSEDCKPDLETYTLLYNS---------LLRRFNKLH--------VCYVY 193
RA D+ +M +PD+ +Y ++ + L FN++ + Y
Sbjct: 504 DRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTT 563
Query: 194 LHAVRSLTKQMKAVG-----------VIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLY 242
L +++ Q K V D NM+++ Y + +++A RV M
Sbjct: 564 LMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKEN 623
Query: 243 GCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCL-----RPSTSTYVIIVCSLAMDR 297
G PN +Y +A G+ + + L +KE+KE+C PS S+ L D
Sbjct: 624 GFYPNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDE 683
Query: 298 R--------------FEDAIEVLFDMLGNSRSPDHLTYKTV 324
F+ A+E++ M N P+ YK +
Sbjct: 684 GLLDTLADICVRAAFFKKALEIIACMEENGIPPNKTKYKKI 724
>AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11605156-11610651 FORWARD
LENGTH=843
Length = 843
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 160 MLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMI 219
++ ++ KP+ ET+ N L R Y ++ +K + P++ + N I
Sbjct: 453 IMSNKSVKPNSETFRKSIN-LCIRIKDFEGAY-------NMLGNLKNFNLAPNSSMYNSI 504
Query: 220 IKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCL 279
+ Y + +V+ A++V EM +P++ ++SY+ E+ + + +YKEMK+ +
Sbjct: 505 MAGYFREKKVNSALKVLKEMKEADVKPDSVTFSYLINYCGEEATIAK---YYKEMKQAGV 561
Query: 280 RPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVL-EGLCRERRADEAF 338
+ Y+ +V + A +FE A +VL D+ + DH K+VL L EA
Sbjct: 562 EVNKHVYMSLVKAYASCGQFEKAKQVLMDL--EVPAKDHNELKSVLISALASNGNITEAL 619
Query: 339 DLLDECKKRDISMSEKMYKTLLDD 362
+ +E KK + K +L+++
Sbjct: 620 SIYEEMKKLRCPVEPKAILSLIEN 643
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 88/193 (45%), Gaps = 17/193 (8%)
Query: 152 RAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIP 211
RA ++ + LR E PD T++ + + H ++ ++ G +
Sbjct: 352 RAIHLFGQ-LRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKG--------GFLA 402
Query: 212 DTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFY 271
DT + N +I AY+KC +D +RVF +M + S++ + + G+V+ L +
Sbjct: 403 DTVLNNSLIHAYAKCGSLDLCMRVFDDMD----SRDVVSWNSMLKAYSLHGQVDSILPVF 458
Query: 272 KEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLT-YKTVLEGLCR 330
++M + P ++T++ ++ + + R E+ + + M + L Y V++ L R
Sbjct: 459 QKMD---INPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSR 515
Query: 331 ERRADEAFDLLDE 343
R EA +++ +
Sbjct: 516 AERFAEAEEVIKQ 528
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 4/174 (2%)
Query: 177 YNSLLRRFNKL---HVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAI 233
+N+ + ++KL H ++ V + K+M G+ PD ++ YSK + A
Sbjct: 380 FNASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERAT 439
Query: 234 RVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSL 293
F + YG P+ Y + G G+ G KEM+ K L+ S Y+ ++ +
Sbjct: 440 EAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAY 499
Query: 294 AMDRRFEDAIEVLFDMLGNSRSP-DHLTYKTVLEGLCRERRADEAFDLLDECKK 346
A A + M S P Y +E + + D+A DE +K
Sbjct: 500 AQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRK 553
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 9/197 (4%)
Query: 174 TLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAI 233
L YN +++ + K + L SL K MK G PD N + + + VDEA
Sbjct: 515 VLEYNVMIKAYGKAKLHEKAL----SLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQ 570
Query: 234 RVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSL 293
R+ EM GC+P +Y+ + G ++ + Y+ M++ ++P+ Y ++
Sbjct: 571 RILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGF 630
Query: 294 AMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKR----DI 349
A E+AI+ M + +H+ ++++ + +EA + D+ K D+
Sbjct: 631 AESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDV 690
Query: 350 SMSEKMYKTLLDDLHYV 366
+ S M +L DL V
Sbjct: 691 AASNSML-SLCADLGIV 706
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%)
Query: 213 TFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
T N +I Y K +++A +F EM G + +++ + G +++ K
Sbjct: 305 TSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLK 364
Query: 273 EMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRER 332
+M+EK + P T TY I++ A E A+E + PD +T++ VL LC+ +
Sbjct: 365 KMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRK 424
Query: 333 RADEAFDLLDECKKRDISMSE 353
E ++ E + I + E
Sbjct: 425 MVAEVEAVIAEMDRNSIRIDE 445
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 155 DVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTF 214
+++ +M E KPD T L + H +V+ +R Q+K D F
Sbjct: 353 ELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIR---LQLKG-----DAF 404
Query: 215 VLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEM 274
+ + +I Y KC ++ A VF E + ++ + GL G Q L + M
Sbjct: 405 LSSALIDMYCKCGIIERAFMVFKT----ATEKDVALWTSMITGLAFHGNGQQALQLFGRM 460
Query: 275 KEKCLRPSTSTYVIIVCSLAMDRRFEDAIEV---LFDMLGNSRSPDHLTYKTVLEGLCRE 331
+E+ + P+ T + ++ + + E+ + V + D G +H Y ++++ LCR
Sbjct: 461 QEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEH--YGSLVDLLCRA 518
Query: 332 RRADEAFDLLDECKKRDISMSEKMYKTLLD 361
R +EA D++ KK + S+ M+ ++L
Sbjct: 519 GRVEEAKDIVQ--KKMPMRPSQSMWGSILS 546
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 12/142 (8%)
Query: 212 DTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFY 271
+ V N +I Y KC +D+A+ VF M E + S++ I G++ GL F+
Sbjct: 191 NVVVGNCLIDMYGKCGFMDDAVLVFQHME----EKDTVSWNAIVASCSRNGKLELGLWFF 246
Query: 272 KEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRE 331
+M P T TY ++ + F +A +VL DM +P+ ++ T+L G
Sbjct: 247 HQMP----NPDTVTYNELIDAFVKSGDFNNAFQVLSDM----PNPNSSSWNTILTGYVNS 298
Query: 332 RRADEAFDLLDECKKRDISMSE 353
++ EA + + + E
Sbjct: 299 EKSGEATEFFTKMHSSGVRFDE 320
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 32/211 (15%)
Query: 159 KMLRSEDCKPDLETYTLLYN-----SLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDT 213
K++ +C+PD T L S L+ +++H CY G+ P+
Sbjct: 462 KLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVH-CYSL------------KTGLAPEQ 508
Query: 214 FVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKE 273
F+ N +I Y+KC + +A R+F M + S+S + G + G + L +KE
Sbjct: 509 FIKNGLIDMYAKCGSLGQARRIFDSMD----NRDVVSWSTLIVGYAQSGFGEEALILFKE 564
Query: 274 MKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDML---GNSRSPDHLTYKTVLEGLCR 330
MK + P+ T+V ++ + + E+ +++ M G S + +H + V++ L R
Sbjct: 565 MKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCS--CVVDLLAR 622
Query: 331 ERRADEAFDLLDECK-KRDISMSEKMYKTLL 360
R +EA +DE K + D+ ++KTLL
Sbjct: 623 AGRLNEAERFIDEMKLEPDVV----VWKTLL 649
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 77/157 (49%), Gaps = 1/157 (0%)
Query: 197 VRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIAR 256
++L M + G P V N+++ A SK ++DEA V M G +P+ Y+Y+ I
Sbjct: 391 AKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIIS 450
Query: 257 GLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSP 316
G + G +++ E K+K + S TY ++ +++A+++L +M P
Sbjct: 451 GYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQP 510
Query: 317 DHLTYKTVLEGLC-RERRADEAFDLLDECKKRDISMS 352
+ Y +++ C + ++A L +E K++ + ++
Sbjct: 511 NADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLN 547
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 21/182 (11%)
Query: 104 IIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRS 163
+I L R + A+ L+ ++I+ ++N ++ C + A +V K++ S
Sbjct: 378 VIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVH-ACSKTGDLDEAKEVL-KLMES 435
Query: 164 EDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAY 223
KPD+ TYT++ + + + A + K + P T+ + +I+ Y
Sbjct: 436 RGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKK------LSPVTY--HALIRGY 487
Query: 224 SKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLC------EKGRVNQGLGFYKEMKEK 277
K E DEA+++ +EM +G +PNA Y+ + + C EK V ++EMK+K
Sbjct: 488 CKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEV-----LFEEMKQK 542
Query: 278 CL 279
L
Sbjct: 543 GL 544
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 120/288 (41%), Gaps = 21/288 (7%)
Query: 57 NHLKPG-FTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQ 115
H++P FT S +A ++SDP + + A +R ++I R +
Sbjct: 367 GHVEPNHFTFSSAFKACGNLSDPRVGKQVLG-QAFKRGLASNSSVANSVISMFVKSDRME 425
Query: 116 QAETLVEEVIAGACDGSIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTL 175
A+ E + + ++ YN+ + C R F +AF L SE + +L
Sbjct: 426 DAQRAFESL----SEKNLVSYNTFLDGTC-RNLNFEQAFK-----LLSEITERELGVSAF 475
Query: 176 LYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRV 235
+ SLL + + + Q+ +G+ + V N +I YSKC +D A RV
Sbjct: 476 TFASLLSGVANVG----SIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRV 531
Query: 236 FHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAM 295
F+ M N S++ + G + G + L + +M E+ ++P+ TYV I+ + +
Sbjct: 532 FNFME----NRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSH 587
Query: 296 DRRFEDAIEVLFDMLGNSR-SPDHLTYKTVLEGLCRERRADEAFDLLD 342
+ M + + P Y +++ LCR +AF+ ++
Sbjct: 588 VGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 119/270 (44%), Gaps = 53/270 (19%)
Query: 130 DGSIPLYNSII-RFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLH 188
DG + + NS++ + RK + A++V M R ++ + Y SL+ RFN+L
Sbjct: 459 DGEMVVGNSLVDAYASSRKVDY--AWNVIRSMKRRDN---------ITYTSLVTRFNELG 507
Query: 189 --------VCYVYLHAVR----------SLTKQMKAV-------------GVIPDTFVLN 217
+ Y+Y +R S + + A+ G VLN
Sbjct: 508 KHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLN 567
Query: 218 MIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEK 277
++ YSKC +++A +VF E+ P+ S++ + GL G ++ L ++EM+ K
Sbjct: 568 SLVDMYSKCGSLEDAKKVFEEI----ATPDVVSWNGLVSGLASNGFISSALSAFEEMRMK 623
Query: 278 CLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGN--SRSPDHLTYKTVLEGLCRERRAD 335
P + T++I++ + + R + +E F ++ + P Y ++ L R R +
Sbjct: 624 ETEPDSVTFLILLSACSNGRLTDLGLE-YFQVMKKIYNIEPQVEHYVHLVGILGRAGRLE 682
Query: 336 EAFDLLDECKKRDISMSEKMYKTLLDDLHY 365
EA +++ + +M ++KTLL Y
Sbjct: 683 EATGVVETMHLKPNAM---IFKTLLRACRY 709
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 16/203 (7%)
Query: 149 LFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRR----FNKLHVCYVYLHAVRSLTKQM 204
L +R +N M+ + ++ L++ + +R +N + YV +R L +
Sbjct: 66 LEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEAR 125
Query: 205 KAVGVIP--DTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKG 262
K +P D+F N +I Y+K + EA+ +F +M E NA S+S + G C+ G
Sbjct: 126 KLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKM----PERNAVSWSAMITGFCQNG 181
Query: 263 RVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVL--FDMLGNSRSPDHLT 320
V+ + +++M K +S +V L + R +A VL + L + R
Sbjct: 182 EVDSAVVLFRKMPVK----DSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYA 237
Query: 321 YKTVLEGLCRERRADEAFDLLDE 343
Y T++ G + + + A L D+
Sbjct: 238 YNTLIVGYGQRGQVEAARCLFDQ 260
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%)
Query: 194 LHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSY 253
L + R + +M G ++FV + ++ + +V EA R+ EM G P +++
Sbjct: 320 LVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNC 379
Query: 254 IARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNS 313
+ G G +GL + + M + L PS S + +V S++ A E+L +
Sbjct: 380 LIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKG 439
Query: 314 RSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
PD TY ++ G D+A L E + R +S +++++L+ L
Sbjct: 440 FVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGL 489
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 200 LTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLC 259
LTK + G +PD + +I+ + + ++D+A+++F+EM P + + GLC
Sbjct: 432 LTKSIDK-GFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLC 490
Query: 260 EKGRVNQGLGFYKEMKEKCLRPSTSTY 286
G+V G + K MK++ + P+ Y
Sbjct: 491 TCGKVEAGEKYLKIMKKRLIEPNADIY 517
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 20/179 (11%)
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGV--- 209
A +++++M C+PD TL+ N L C SL KQ+ V
Sbjct: 212 ALEMFSRMTNEFGCRPD--NITLV--------NVLPPCASL--GTHSLGKQLHCFAVTSE 259
Query: 210 -IPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGL 268
I + FV N ++ Y+KC +DEA VF M + + S++ + G + GR +
Sbjct: 260 MIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSV----KDVVSWNAMVAGYSQIGRFEDAV 315
Query: 269 GFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEG 327
+++M+E+ ++ T+ + A +A+ V ML + P+ +T +VL G
Sbjct: 316 RLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSG 374
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 16/211 (7%)
Query: 133 IPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLL--RRFNKLHVC 190
+ +YN+++ C RK + AF V + L+ KP TY L+ +L ++N +H
Sbjct: 593 VVVYNAVLNACVQRK-QWEGAFWVL-QQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEF 650
Query: 191 YVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYS 250
+ R + K IP+ +++ K + DEA+ +M G +A
Sbjct: 651 F------RKMQK-----SSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAAL 699
Query: 251 YSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDML 310
Y +AR LC GR N+GL K++ +P TY ++ + ++A +FD +
Sbjct: 700 YYDLARCLCSAGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAA-YIFDQM 758
Query: 311 GNSRSPDHLTYKTVLEGLCRERRADEAFDLL 341
SP+ +T +L+ + +EA +L
Sbjct: 759 KKVCSPNLVTCNIMLKAYLQGGLFEEARELF 789
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 73/174 (41%), Gaps = 9/174 (5%)
Query: 200 LTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLC 259
L ++M G++ +T +I+ + + D A +F EM G P+ +Y+ + GLC
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 260 EKGR---------VNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDML 310
+ G+ V G + + K ++P+ TY ++ E+A + M
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMK 122
Query: 311 GNSRSPDHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLH 364
+ PD TY T++ R+ + +L+ E + + Y + D LH
Sbjct: 123 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLH 176
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 80/174 (45%), Gaps = 14/174 (8%)
Query: 174 TLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAI 233
T+ Y +L++ + C + + K+M + GV PD N+++ K ++++A+
Sbjct: 16 TVTYTTLIQGLFQAGDC----DMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKAL 71
Query: 234 ---------RVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTS 284
+F + L G +PN +Y+ + G C+KG + +++MKE P +
Sbjct: 72 VAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSG 131
Query: 285 TYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRADEAF 338
TY ++ + D + E++ +M + D TY V + + + R D+ F
Sbjct: 132 TYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD-MLHDGRLDKGF 184
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 9/137 (6%)
Query: 233 IRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCS 292
+ +F EM G N +Y+ + +GL + G + +KEM + P TY I++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 293 LAMDRRFEDA-----IEVLFDMLGN----SRSPDHLTYKTVLEGLCRERRADEAFDLLDE 343
L + + E A +E +D+ + P+ +TY T++ G C++ +EA+ L +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 344 CKKRDISMSEKMYKTLL 360
K+ Y TL+
Sbjct: 121 MKEDGPLPDSGTYNTLI 137
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 107/243 (44%), Gaps = 23/243 (9%)
Query: 91 QRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYN--SIIRFCCGRKF 148
Q+ ++ + + +I L + +A +L+ +++ C G PL + S++ G
Sbjct: 424 QKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVR--C-GLKPLNSTYSVLLSSAGATS 480
Query: 149 LFSRAFDVYNKMLRSEDC-KPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAV 207
+ ++ + ++ C PDL +L NSL+ + K C A K ++
Sbjct: 481 NLDQGKHIHCVIAKTTACYDPDL----ILQNSLVSMYAK---CGAIEDAYEIFAKMVQ-- 531
Query: 208 GVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQG 267
DT N +I S D+A+ +F EM G +PN+ ++ + G + +G
Sbjct: 532 ---KDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRG 588
Query: 268 LGFYKEMKEK-CLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLE 326
L +K MKE ++P Y+ ++ L + ++A E + + +PDH Y +L
Sbjct: 589 LELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISAL---PFTPDHTVYGALL- 644
Query: 327 GLC 329
GLC
Sbjct: 645 GLC 647
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/271 (19%), Positives = 107/271 (39%), Gaps = 8/271 (2%)
Query: 72 LTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDG 131
L S ++PD L+I R T+ Y+ + + + L + + L++ I D
Sbjct: 49 LKSENNPDRILEICRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDP 108
Query: 132 SIPLYNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCY 191
+ GR + R+ + + + E + LL+ L+ +
Sbjct: 109 KSESFAVRAIILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAK-------- 160
Query: 192 VYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSY 251
Y A R + K G+ PD N +I+ + + + EM +P A S+
Sbjct: 161 DYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASF 220
Query: 252 SYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLG 311
+ G ++ + ++ + M E + +TY I++ L ++ +A ++ ++
Sbjct: 221 GLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMS 280
Query: 312 NSRSPDHLTYKTVLEGLCRERRADEAFDLLD 342
P+ +TY ++ G C E DEA +L +
Sbjct: 281 CRMRPNSVTYSLLIHGFCSEENLDEAMNLFE 311
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 96/222 (43%), Gaps = 8/222 (3%)
Query: 142 FCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLT 201
F C + A VY +M + +PDLETY N ++R + + S+
Sbjct: 154 FACLMAKDYKEANRVYLEMPKMYGIEPDLETY----NRMIRVLCESGS----TSSSYSIV 205
Query: 202 KQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEK 261
+M+ + P ++I + K + DE +V M +G +Y+ + + LC++
Sbjct: 206 AEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKR 265
Query: 262 GRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTY 321
+ + + +RP++ TY +++ + ++A+ + M+ N PD Y
Sbjct: 266 KKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECY 325
Query: 322 KTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDL 363
T++ LC+ + A L E +++ S + K L++ L
Sbjct: 326 FTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGL 367
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%)
Query: 210 IPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLG 269
+ + + N ++KAY++ + I +F M L G +PN ++ + G V++G
Sbjct: 280 VKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRY 339
Query: 270 FYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDM 309
++ +MKE + P+ Y +V L R ++A+EV+ +M
Sbjct: 340 YFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNM 379
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 8/150 (5%)
Query: 149 LFSRAFDVYNKMLRSEDCK----PDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQM 204
L S D+Y K D K +E +L+N+LL + + + A+R L M
Sbjct: 412 LASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSG---EALR-LFYGM 467
Query: 205 KAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRV 264
+ GV P+ N+II + + +VDEA +F +M G PN S++ + G+ + G
Sbjct: 468 QLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCS 527
Query: 265 NQGLGFYKEMKEKCLRPSTSTYVIIVCSLA 294
+ + F ++M+E LRP+ + + + + A
Sbjct: 528 EEAILFLRKMQESGLRPNAFSITVALSACA 557
>AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26596207-26598192 FORWARD
LENGTH=661
Length = 661
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 106/261 (40%), Gaps = 20/261 (7%)
Query: 48 LEKQFETWVNHLKPGFTPSDVDRALTSVSDPDLALDIFRWTAQQRSYNHTDLNYLTIIKQ 107
LE+ W N L V + L + P+ A F W A Q + H + TI +
Sbjct: 369 LEEANFVWTNLL--------VCKMLRNFRAPETAWSFFCWVAIQPGFTH---DAYTIERM 417
Query: 108 LNAGRRYQQAETLVEEVIAGACDGSIPLYNSIIRFCC---GRKFLFSRAFDVYNKMLRSE 164
+ R Q E LV+++I+ I L S IR G A V+N+
Sbjct: 418 MAMLARNGQVE-LVDKLISKVRIEGIKLPFSTIRLIIDLYGISKKPEAAIKVFNEDRTLC 476
Query: 165 DCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYS 224
D LLY+SLLR K C A+ +L + M GV PD + ++ ++
Sbjct: 477 GSISDF-NLMLLYSSLLRTLTK---CKRNAEALETL-EDMMLTGVSPDIQTFSGLMYHFA 531
Query: 225 KCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKCLRPSTS 284
E+ R+F + G EP+ Y + + C R +++MK+ L P
Sbjct: 532 LQGEIQTVERLFSMVRQIGLEPDPYMLKLLVQAYCRCERSVLAYRVFQDMKDSNLMPDRE 591
Query: 285 TYVIIVCSLAMDRRFEDAIEV 305
T ++V SL + + ++A V
Sbjct: 592 TKELLVKSLWREEKRKEAAAV 612
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 17/210 (8%)
Query: 152 RAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIP 211
RAF V+++M R PD T L K C L R + +
Sbjct: 601 RAFHVFSQM-RLMGVLPDEFTIATL--------AKASSCLTALEQGRQIHANALKLNCTN 651
Query: 212 DTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFY 271
D FV ++ Y+KC +D+A +F + + N +++ + GL + G + L +
Sbjct: 652 DPFVGTSLVDMYAKCGSIDDAYCLFKRIEMM----NITAWNAMLVGLAQHGEGKETLQLF 707
Query: 272 KEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGN-SRSPDHLTYKTVLEGLCR 330
K+MK ++P T++ ++ + + +A + + M G+ P+ Y + + L R
Sbjct: 708 KQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGR 767
Query: 331 ERRADEAFDLLDECKKRDISMSEKMYKTLL 360
+A +L++ + S MY+TLL
Sbjct: 768 AGLVKQAENLIES---MSMEASASMYRTLL 794
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Query: 212 DTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFY 271
D + N II Y+ +EA+++FHEM G PN + I G++ +GL +
Sbjct: 396 DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIF 455
Query: 272 KEMKEK-CLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCR 330
+ M+ K C+ P+ Y V L + + A+E++ M + PD + +L G C+
Sbjct: 456 ESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESM---TIKPDATVWGALL-GACK 511
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%), Gaps = 8/107 (7%)
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
+++ Y+ + +A +VF EM E N ++ + RG C+ G V +GL +K+M E+
Sbjct: 143 VVELYTSGGRMGDAQKVFDEM----SERNVVVWNLMIRGFCDSGDVERGLHLFKQMSER- 197
Query: 279 LRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVL 325
S ++ ++ SL+ R +A+E+ +M+ PD T TVL
Sbjct: 198 ---SIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVL 241
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 10/127 (7%)
Query: 219 IIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYKEMKEKC 278
+I YSKC V+EA+ VF M N ++YS + GL GR + L + M +
Sbjct: 324 LIDMYSKCGNVEEAVNVFMSMN----NKNVFTYSSMILGLATHGRAQEALHLFHYMVTQT 379
Query: 279 -LRPSTSTYV--IIVCS-LAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRERRA 334
++P+T T+V ++ CS + + + ++ G + DH Y +++ L R R
Sbjct: 380 EIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDH--YTCMVDLLGRTGRL 437
Query: 335 DEAFDLL 341
EA +L+
Sbjct: 438 QEALELI 444
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Query: 207 VGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQ 266
+G DTF +N ++ +Y K E++ A ++F EM CEPN S++ + G + G+
Sbjct: 58 LGFASDTFTVNHLVISYVKLKEINTARKLFDEM----CEPNVVSWTSVISGYNDMGKPQN 113
Query: 267 GLGFYKEMKE-KCLRPSTSTY--VIIVCSLAMDRRFEDAIEVLFDMLGNSRS 315
L +++M E + + P+ T+ V CS + R I ++ G R+
Sbjct: 114 ALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRN 165
>AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8183594-8185180 REVERSE
LENGTH=501
Length = 501
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 17/153 (11%)
Query: 136 YNSIIRFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRF---NKLHVCYV 192
Y IIRF C K + S A + M+ + P LE +YNS++ + K
Sbjct: 134 YERIIRFLCEEKSM-SEAIRAFRSMIDDHELSPSLE----IYNSIIHSYADDGKFEEAMF 188
Query: 193 YLHAVRSLTKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYS 252
YL+ MK G++P T + +I+AY K DE + M GC + +Y+
Sbjct: 189 YLN-------HMKENGLLPITETYDGLIEAYGKWKMYDEIVLCLKRMESDGCVRDHVTYN 241
Query: 253 YIARGLCEKGRVNQGLGFYKEM--KEKCLRPST 283
+ R G + + Y+ + ++ L PST
Sbjct: 242 LLIREFSRGGLLKRMEQMYQSLMSRKMTLEPST 274
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 80/191 (41%), Gaps = 12/191 (6%)
Query: 153 AFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSLTKQMKAVGVIPD 212
AF +Y +M S +PD TY L ++ + ++ +RS G
Sbjct: 104 AFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRS--------GFGSL 155
Query: 213 TFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIARGLCEKGRVNQGLGFYK 272
+V N ++ Y+ C +V A +VF +M E + +++ + G E G+ + L Y
Sbjct: 156 IYVQNSLLHLYANCGDVASAYKVFDKMP----EKDLVAWNSVINGFAENGKPEEALALYT 211
Query: 273 EMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSPDHLTYKTVLEGLCRER 332
EM K ++P T V ++ + A V M+ + + + +L+ R
Sbjct: 212 EMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCG 271
Query: 333 RADEAFDLLDE 343
R +EA L DE
Sbjct: 272 RVEEAKTLFDE 282
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 1/170 (0%)
Query: 198 RSLTKQMKAV-GVIPDTFVLNMIIKAYSKCLEVDEAIRVFHEMGLYGCEPNAYSYSYIAR 256
R L ++M V GV + +I K + +E V M + SY +
Sbjct: 230 RELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLID 289
Query: 257 GLCEKGRVNQGLGFYKEMKEKCLRPSTSTYVIIVCSLAMDRRFEDAIEVLFDMLGNSRSP 316
G G+V + M +K LR + Y +I+ + E IE+ +M +P
Sbjct: 290 GFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTP 349
Query: 317 DHLTYKTVLEGLCRERRADEAFDLLDECKKRDISMSEKMYKTLLDDLHYV 366
+ TY ++ GLC+ + EA L+E + + + E+MY TL ++ + V
Sbjct: 350 NKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRV 399
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 11/158 (6%)
Query: 81 ALDIFRWTAQQRSYNHTDLNYLTIIKQLNAGRRYQQAETLVEEVIAGACDGSIPLYNSII 140
A+ ++ W A + + Y I +Y +AE L +E++ D + Y++I+
Sbjct: 372 AVKVYEW-AMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIM 430
Query: 141 RFCCGRKFLFSRAFDVYNKMLRSEDCKPDLETYTLLYNSLLRRFNKLHVCYVYLHAVRSL 200
G+ S A + KM + CKP++ +YNSL+ +H + L +
Sbjct: 431 DMY-GKTRRLSDAVRLMAKM-KQRGCKPNI----WIYNSLI----DMHGRAMDLRRAEKI 480
Query: 201 TKQMKAVGVIPDTFVLNMIIKAYSKCLEVDEAIRVFHE 238
K+MK V+PD +I AY++ E++ + ++ E
Sbjct: 481 WKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQE 518