Miyakogusa Predicted Gene
- Lj6g3v1946540.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1946540.1 Non Chatacterized Hit- tr|I1M1I5|I1M1I5_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,88.17,0,PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat; seg,NULL;
PENTATRICOPEPTIDE (PPR) REP,CUFF.60263.1
(609 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 770 0.0
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 638 0.0
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 461 e-129
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 457 e-128
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 449 e-126
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 449 e-126
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 446 e-125
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 442 e-124
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 441 e-124
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 436 e-122
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 436 e-122
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 434 e-121
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 431 e-121
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 429 e-120
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 429 e-120
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 427 e-119
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 423 e-118
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 423 e-118
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 422 e-118
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 419 e-117
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 418 e-117
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 418 e-117
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 416 e-116
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 416 e-116
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 416 e-116
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 416 e-116
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 415 e-116
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 412 e-115
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 412 e-115
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 409 e-114
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 407 e-113
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 405 e-113
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 404 e-112
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 402 e-112
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 400 e-111
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 400 e-111
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 396 e-110
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 395 e-110
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 395 e-110
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 395 e-110
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 394 e-110
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 393 e-109
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 390 e-108
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 389 e-108
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 387 e-107
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 387 e-107
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 383 e-106
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 381 e-106
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 380 e-105
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 379 e-105
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 378 e-105
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 378 e-105
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 376 e-104
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 375 e-104
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 374 e-104
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 374 e-104
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 374 e-103
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 370 e-102
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 370 e-102
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 367 e-101
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 365 e-101
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 363 e-100
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 363 e-100
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 362 e-100
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 362 e-100
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 362 e-100
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 359 2e-99
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 359 4e-99
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 350 1e-96
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 350 1e-96
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 345 4e-95
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 345 8e-95
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 340 1e-93
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 339 3e-93
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 334 9e-92
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 2e-91
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 330 3e-90
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 326 2e-89
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 324 1e-88
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 2e-88
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 318 7e-87
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 315 7e-86
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 314 1e-85
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 310 1e-84
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 3e-83
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 304 1e-82
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 2e-82
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 2e-82
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 301 9e-82
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 301 9e-82
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 1e-81
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 7e-81
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 2e-80
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 2e-79
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 3e-79
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 3e-79
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 2e-77
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 284 1e-76
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 283 3e-76
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 3e-76
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 282 4e-76
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 3e-75
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 278 7e-75
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 8e-74
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 9e-74
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 273 4e-73
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 5e-73
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 7e-73
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 1e-72
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 3e-72
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 4e-72
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 269 5e-72
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 1e-71
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 266 4e-71
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 266 5e-71
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 9e-71
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 2e-70
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 263 2e-70
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 262 5e-70
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 6e-70
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 6e-70
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 8e-70
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 1e-69
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 259 5e-69
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 1e-68
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 5e-68
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 251 8e-67
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 249 3e-66
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 8e-66
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 248 1e-65
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 1e-65
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 246 4e-65
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 4e-65
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 4e-65
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 244 1e-64
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 243 3e-64
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 242 5e-64
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 5e-64
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 2e-63
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 240 3e-63
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 239 3e-63
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 239 5e-63
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 2e-61
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 2e-61
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 233 2e-61
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 6e-61
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 1e-60
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 230 2e-60
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 4e-60
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 8e-60
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 9e-60
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 5e-59
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 1e-58
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 5e-58
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 3e-56
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 5e-56
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 1e-55
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 2e-55
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 4e-55
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 5e-55
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 7e-55
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 4e-54
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 208 8e-54
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 2e-53
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 205 9e-53
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 9e-53
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 2e-52
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 2e-51
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 3e-51
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 198 1e-50
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 196 3e-50
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 194 1e-49
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 4e-49
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 1e-48
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 2e-48
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 5e-47
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 2e-46
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 2e-41
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 4e-38
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 1e-35
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 7e-34
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 138 9e-33
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 1e-24
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 95 2e-19
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 94 4e-19
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 92 8e-19
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 3e-18
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 91 3e-18
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 2e-17
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 2e-17
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 87 4e-17
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 7e-16
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 82 1e-15
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 2e-15
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 2e-15
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 3e-15
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 2e-14
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 4e-14
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 75 2e-13
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 74 2e-13
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 74 2e-13
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 74 2e-13
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 7e-13
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 70 4e-12
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 5e-12
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 70 5e-12
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 68 2e-11
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 6e-11
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 66 7e-11
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 9e-11
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 4e-10
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 7e-10
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 8e-10
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 62 2e-09
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-09
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 60 5e-09
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 59 9e-09
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 58 2e-08
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 57 3e-08
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 57 4e-08
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 9e-08
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 55 2e-07
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 54 2e-07
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 54 3e-07
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 53 6e-07
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-06
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 50 4e-06
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 50 4e-06
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/585 (63%), Positives = 453/585 (77%), Gaps = 18/585 (3%)
Query: 42 LPHVLTKCISLLQ-YCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAP--MS 98
LP V KCI+LLQ Y SS KL+QIHAFSIRHGV + + ++GKHLIF +VSL +P MS
Sbjct: 12 LPMV-EKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMS 70
Query: 99 YAHLVFTMIRNP-NVFTWNTMIRGYAESQDPKPALHFYRQMTMS-CVEPDTHTYPFLLKA 156
YAH VF+ I P NVF WNT+IRGYAE + A YR+M +S VEPDTHTYPFL+KA
Sbjct: 71 YAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKA 130
Query: 157 VSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR----- 211
V+ +VR GE +HSV I++GF SL++V+NSLLH+YA CGD SA+KVF+ M ++
Sbjct: 131 VTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAW 190
Query: 212 ------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLK 265
FA NG+P EAL L+ EM++ G++PDGFT+VSLLSACA++GAL LG+RVHVY++K
Sbjct: 191 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 250
Query: 266 AGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXX 325
GL NLH N LLDLYA+CG + EA+ +F EM ++N VSWT+LIVGLAVNGFG
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 310
Query: 326 -XXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLL 384
+ L P EITFVG+LYACSHCGM+ EGF+YFRRM+EEY I PRIEH+GCMVDLL
Sbjct: 311 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 370
Query: 385 SRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYV 444
+RAG VK+AYEYI++MP+QPN VIWRTLLGACT+HG L E AR +L+LEP HSGDYV
Sbjct: 371 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYV 430
Query: 445 LLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYA 504
LLSN+YASE+RW+DVQ IRK ML+DGVKK PG+SLVE+GNRV+EF MGD+SHPQS +YA
Sbjct: 431 LLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYA 490
Query: 505 XXXXXXXXXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMK 564
GYVP+ NV D+EEEEKE A+ YHSEK+AIAFML++T +PI V+K
Sbjct: 491 KLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVK 550
Query: 565 NLRVCADCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
NLRVCADCH+AIKL+SKVY+REIV+RDRSRFHHF+ G CSC+DYW
Sbjct: 551 NLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 638 bits (1645), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 295/460 (64%), Positives = 363/460 (78%), Gaps = 12/460 (2%)
Query: 162 NVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------- 211
+VR GE +HSV I++GF SL++V+NSLLH+YA CGD SA+KVF+ M ++
Sbjct: 3 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 62
Query: 212 -FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRE 270
FA NG+P EAL L+ EM++ G++PDGFT+VSLLSACA++GAL LG+RVHVY++K GL
Sbjct: 63 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 122
Query: 271 NLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXX-XXXX 329
NLH N LLDLYA+CG + EA+ +F EM ++N VSWT+LIVGLAVNGFG
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Query: 330 XXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGL 389
+ L P EITFVG+LYACSHCGM+ EGF+YFRRM+EEY I PRIEH+GCMVDLL+RAG
Sbjct: 183 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 242
Query: 390 VKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNL 449
VK+AYEYI++MP+QPN VIWRTLLGACT+HG L E AR +L+LEP HSGDYVLLSN+
Sbjct: 243 VKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNM 302
Query: 450 YASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXX 509
YASE+RW+DVQ IRK ML+DGVKK PG+SLVE+GNRV+EF MGD+SHPQS +YA
Sbjct: 303 YASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEM 362
Query: 510 XXXXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVC 569
GYVP+ NV D+EEEEKE A+ YHSEK+AIAFML++T +PI V+KNLRVC
Sbjct: 363 TGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVC 422
Query: 570 ADCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
ADCH+AIKL+SKVY+REIV+RDRSRFHHF+ G CSC+DYW
Sbjct: 423 ADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 115/235 (48%), Gaps = 20/235 (8%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A+ VF + ++ WN++I G+AE+ P+ AL Y +M ++PD T LL A +K
Sbjct: 42 AYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAK 101
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-------- 211
+ G+ +H IK G + N LL +YA CG E A +F+ M D+
Sbjct: 102 IGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSL 161
Query: 212 ---FALNGRPNEALTLFREM-SANGVEPDGFTVVSLLSACAELGALELG----RRVHVYL 263
A+NG EA+ LF+ M S G+ P T V +L AC+ G ++ G RR+
Sbjct: 162 IVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMRE-- 219
Query: 264 LKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEME-ERNVVSWTTLIVGLAVNG 317
+ + + ++DL A+ G +++A + M + NVV W TL+ V+G
Sbjct: 220 -EYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 461 bits (1185), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/571 (42%), Positives = 340/571 (59%), Gaps = 15/571 (2%)
Query: 52 LLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPN 111
LL+ +S +LK+IHA +R G N + + L +V M YA VF + P
Sbjct: 16 LLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVI--GDMCYARQVFDEMHKPR 73
Query: 112 VFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHS 171
+F WNT+ +GY +Q P +L Y++M V PD TYPF++KA+S+ + G ALH+
Sbjct: 74 IFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHA 133
Query: 172 VTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESM--TDRFALN---------GRPNE 220
+K GF L V L+ +Y G+ SA +FESM D A N G
Sbjct: 134 HVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAI 193
Query: 221 ALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLD 280
AL F +M A+ V+ D FTVVS+LSAC +LG+LE+G ++ K + N+ V NA LD
Sbjct: 194 ALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLD 253
Query: 281 LYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEIT 340
++ KCG+ A+ +F EM++RNVVSW+T+IVG A+NG + L P +T
Sbjct: 254 MHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVT 313
Query: 341 FVGVLYACSHCGMLDEGFDYFRRMKE--EYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQ 398
F+GVL ACSH G+++EG YF M + + + PR EHY CMVDLL R+GL+++AYE+I+
Sbjct: 314 FLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIK 373
Query: 399 NMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTD 458
MPV+P+ IW LLGAC +H + LG+ L++ P +VLLSN+YA+ +W
Sbjct: 374 KMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDC 433
Query: 459 VQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGY 518
V +R M + G KK YS VE +++ F GD+SHPQS+ +Y GY
Sbjct: 434 VDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGY 493
Query: 519 VPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKL 578
VP T +V D+E EEKE +LS+HSEK+AIAF L+ PG PIRVMKNLR C DCH K
Sbjct: 494 VPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKF 553
Query: 579 ISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
+S + EI++RD++RFHHFR G CSCK++W
Sbjct: 554 VSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 457 bits (1176), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/612 (40%), Positives = 352/612 (57%), Gaps = 45/612 (7%)
Query: 42 LPHVLTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAP-MSYA 100
L H L + +S LQ C S + +LKQIHA ++ G+ + + K L F I S S+ + YA
Sbjct: 10 LEHNLYETMSCLQRC-SKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYA 68
Query: 101 HLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKS 160
+VF P+ F WN MIRG++ S +P+ +L Y++M S + +T+P LLKA S
Sbjct: 69 QIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNL 128
Query: 161 LNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE-----------SMT 209
E +H+ K G+E+ V+ NSL++ YA G+ + AH +F+ S+
Sbjct: 129 SAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVI 188
Query: 210 DRFALNGRPNEALTLFR-------------------------------EMSANGVEPDGF 238
+ G+ + ALTLFR EM + VEPD
Sbjct: 189 KGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNV 248
Query: 239 TVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEM 298
++ + LSACA+LGALE G+ +H YL K +R + + L+D+YAKCG + EA +VF +
Sbjct: 249 SLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNI 308
Query: 299 EERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGF 358
++++V +WT LI G A +G G + P ITF VL ACS+ G+++EG
Sbjct: 309 KKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGK 368
Query: 359 DYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTI 418
F M+ +Y + P IEHYGC+VDLL RAGL+ +A +IQ MP++PNAVIW LL AC I
Sbjct: 369 LIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRI 428
Query: 419 HGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYS 478
H ++ LGE L+ ++P H G YV +N++A +++W R+ M + GV K PG S
Sbjct: 429 HKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCS 488
Query: 479 LVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLAD-IEEEEKEQA 537
+ L +EF GDRSHP+ + + + GYVP E +L D ++++E+E
Sbjct: 489 TISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAI 548
Query: 538 LSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDREIVIRDRSRFHH 597
+ HSEK+AI + L+ T PGT IR+MKNLRVC DCH KLISK+Y R+IV+RDR+RFHH
Sbjct: 549 VHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHH 608
Query: 598 FRGGKCSCKDYW 609
FR GKCSC DYW
Sbjct: 609 FRDGKCSCGDYW 620
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 449 bits (1156), Expect = e-126, Method: Compositional matrix adjust.
Identities = 233/576 (40%), Positives = 343/576 (59%), Gaps = 15/576 (2%)
Query: 48 KCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIV--SLSAPMSYAHLVFT 105
+C+ LL+ C + + KQ+HA I+ + + ++ M+YA +F
Sbjct: 32 ECLYLLKRC-HNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFR 90
Query: 106 MIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVRE 165
I +P F +NTMIRGY + AL FY +M EPD TYP LLKA ++ ++RE
Sbjct: 91 GIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIRE 150
Query: 166 GEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALN---------- 215
G+ +H K G E+ VFV+NSL+++Y CG+ E + VFE + + A +
Sbjct: 151 GKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAG 210
Query: 216 -GRPNEALTLFREM-SANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
G +E L LFR M S ++ + +VS L ACA GAL LG +H +LL+ N+
Sbjct: 211 MGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNII 270
Query: 274 VVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQK 333
V +L+D+Y KCG + +A +F +ME+RN ++++ +I GLA++G G +
Sbjct: 271 VQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEG 330
Query: 334 LAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQA 393
L P + +V VL ACSH G++ EG F M +E + P EHYGC+VDLL RAGL+++A
Sbjct: 331 LEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEA 390
Query: 394 YEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASE 453
E IQ++P++ N VIWRT L C + ++ LG+IA LLKL + GDY+L+SNLY+
Sbjct: 391 LETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQG 450
Query: 454 RRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXX 513
+ W DV R + G+K+TPG+S+VEL + + F DRSHP+ +++Y
Sbjct: 451 QMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQL 510
Query: 514 XXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCH 573
GY P +L +++EEEK++ L HS+KVAIAF LL T PG+ I++ +NLR+C+DCH
Sbjct: 511 KFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCH 570
Query: 574 MAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
K IS +Y+REIV+RDR+RFH F+GG CSCKDYW
Sbjct: 571 TYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 449 bits (1154), Expect = e-126, Method: Compositional matrix adjust.
Identities = 229/608 (37%), Positives = 350/608 (57%), Gaps = 61/608 (10%)
Query: 63 LKQIHAFSIRHGVPLHNPDMGKHLIFTIVSL--SAPMSYAHLVFTMIRNPNVFTWNTMIR 120
L QIHA I+ G + L F S + YAH +F + N F+WNT+IR
Sbjct: 39 LSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIR 98
Query: 121 GYAESQDPKPALH---FYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNG 177
G++ES + K + FY M+ VEP+ T+P +LKA +K+ ++EG+ +H + +K G
Sbjct: 99 GFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYG 158
Query: 178 FESLVFVRNSLLHIYAACG----------------------------------------- 196
F FV ++L+ +Y CG
Sbjct: 159 FGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGY 218
Query: 197 ----DTESAHKVFESMTDR-----------FALNGRPNEALTLFREMSANGVEPDGFTVV 241
D ++A +F+ M R ++LNG +A+ +FREM + P+ T+V
Sbjct: 219 MRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLV 278
Query: 242 SLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEER 301
S+L A + LG+LELG +H+Y +G+R + + +AL+D+Y+KCG I +A VF +
Sbjct: 279 SVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE 338
Query: 302 NVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYF 361
NV++W+ +I G A++G + P ++ ++ +L ACSH G+++EG YF
Sbjct: 339 NVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYF 398
Query: 362 RRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGH 421
+M G+ PRIEHYGCMVDLL R+GL+ +A E+I NMP++P+ VIW+ LLGAC + G+
Sbjct: 399 SQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGN 458
Query: 422 LSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVE 481
+ +G+ + L+ + P SG YV LSN+YAS+ W++V +R M + ++K PG SL++
Sbjct: 459 VEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLID 518
Query: 482 LGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLADIEEEEKEQALSYH 541
+ ++EF + D SHP+++++ + GY P T VL ++EEE+KE L YH
Sbjct: 519 IDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYH 578
Query: 542 SEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDREIVIRDRSRFHHFRGG 601
SEK+A AF L++T+PG PIR++KNLR+C DCH +IKLISKVY R+I +RDR RFHHF+ G
Sbjct: 579 SEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDG 638
Query: 602 KCSCKDYW 609
CSC DYW
Sbjct: 639 SCSCMDYW 646
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 144/334 (43%), Gaps = 69/334 (20%)
Query: 153 LLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACG----DTESAHKVFESM 208
L ++ +R+ +H+V IK+G +L A D + AHK+F M
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQM 85
Query: 209 TDR--FALN------GRPNE-----ALTLFREM-SANGVEPDGFTVVSLLSACAELGALE 254
R F+ N +E A+TLF EM S VEP+ FT S+L ACA+ G ++
Sbjct: 86 PQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQ 145
Query: 255 LGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIRE------------------------ 290
G+++H LK G + V++ L+ +Y CG +++
Sbjct: 146 EGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRD 205
Query: 291 ---------------------AQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXX 329
A+ +F +M +R+VVSW T+I G ++NGF
Sbjct: 206 GEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM 265
Query: 330 XXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHY--GCMVDLLSRA 387
+ P +T V VL A S G L+ G ++ E+ GI RI+ ++D+ S+
Sbjct: 266 KKGDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGI--RIDDVLGSALIDMYSKC 322
Query: 388 GLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGH 421
G++++A + +P + N + W ++ IHG
Sbjct: 323 GIIEKAIHVFERLP-RENVITWSAMINGFAIHGQ 355
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 446 bits (1148), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/587 (39%), Positives = 348/587 (59%), Gaps = 29/587 (4%)
Query: 39 ENPLPHVLTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDM---GKHLIFTIVS-LS 94
+NP+ +++KC SL +L QI A++I+ H D+ K + F S
Sbjct: 30 QNPIL-LISKCNSL--------RELMQIQAYAIKS----HIEDVSFVAKLINFCTESPTE 76
Query: 95 APMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLL 154
+ MSYA +F + P++ +N+M RGY+ +P + ++ + PD +T+P LL
Sbjct: 77 SSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 155 KAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE-------- 206
KA + + + EG LH +++K G + V+V +L+++Y C D +SA VF+
Sbjct: 137 KACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVV 196
Query: 207 ---SMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYL 263
+M +A RPNEAL+LFREM ++P+ T++S+LS+CA LG+L+LG+ +H Y
Sbjct: 197 CYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYA 256
Query: 264 LKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXX 323
K + + V AL+D++AKCGS+ +A +F +M ++ +W+ +IV A +G
Sbjct: 257 KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSM 316
Query: 324 XXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDL 383
+ + P EITF+G+L ACSH G ++EG YF +M ++GI P I+HYG MVDL
Sbjct: 317 LMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDL 376
Query: 384 LSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDY 443
LSRAG ++ AYE+I +P+ P ++WR LL AC+ H +L L E + +L+ H GDY
Sbjct: 377 LSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDY 436
Query: 444 VLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVY 503
V+LSNLYA ++W V ++RK M K PG S +E+ N V+EF GD + ++
Sbjct: 437 VILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLH 496
Query: 504 AXXXXXXXXXXXXGYVPRTENVL-ADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRV 562
GYVP T V+ A++ ++EKE L YHSEK+AI F LLNT PGT IRV
Sbjct: 497 RALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRV 556
Query: 563 MKNLRVCADCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
+KNLRVC DCH A KLIS ++ R++V+RD RFHHF GKCSC D+W
Sbjct: 557 VKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 442 bits (1137), Expect = e-124, Method: Compositional matrix adjust.
Identities = 248/594 (41%), Positives = 348/594 (58%), Gaps = 37/594 (6%)
Query: 48 KCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDM---GKHLIFTIVSLSAPMSYAHLVF 104
+ SL + C S +LKQ+HAF++R P + GK I + S + ++YA VF
Sbjct: 50 RIFSLAETC-SDMSQLKQLHAFTLRTTYPEEPATLFLYGK--ILQLSSSFSDVNYAFRVF 106
Query: 105 TMIRNPNVFTWNTMIRGYAESQDPKP-ALHFYRQM-TMSCVEPDTHTYPFLLKAVSKSLN 162
I N + F WNT+IR A K A YR+M PD HT+PF+LKA +
Sbjct: 107 DSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFG 166
Query: 163 VREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE-----------SMTDR 211
EG+ +H +K+GF V+V N L+H+Y +CG + A KVF+ SM D
Sbjct: 167 FSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDA 226
Query: 212 FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLK---AGL 268
G + AL LFREM EPDG+T+ S+LSACA LG+L LG H +LL+ +
Sbjct: 227 LVRFGEYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDV 285
Query: 269 RENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXX 328
++ V N+L+++Y KCGS+R A+QVF M++R++ SW +I+G A +G
Sbjct: 286 AMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDR 345
Query: 329 XXXQK--LAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSR 386
++ + P +TFVG+L AC+H G +++G YF M +Y I P +EHYGC+VDL++R
Sbjct: 346 MVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIAR 405
Query: 387 AGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHG---HLSLGEIARSHLLKLEPKHS--- 440
AG + +A + + +MP++P+AVIWR+LL AC G LS EIAR+ + E S
Sbjct: 406 AGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELS-EEIARNIIGTKEDNESSNG 464
Query: 441 ---GDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHP 497
G YVLLS +YAS RW DV +RK M + G++K PG S +E+ +EF GD SHP
Sbjct: 465 NCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHP 524
Query: 498 QSQDVYAXXXXXXXXXXXXGYVP-RTENVLADIEEE-EKEQALSYHSEKVAIAFMLLNTA 555
Q++ +Y GY+P R++ L D + KE +L HSE++AIAF L+N
Sbjct: 525 QTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLP 584
Query: 556 PGTPIRVMKNLRVCADCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
P TPIR+ KNLRVC DCH KLISKV++ EI++RDR RFHHF+ G CSC DYW
Sbjct: 585 PQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 441 bits (1134), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/609 (38%), Positives = 355/609 (58%), Gaps = 51/609 (8%)
Query: 50 ISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIV---SLSAP---MSYAHLV 103
++LLQ C SS LK IH F +R + + + + L+ V + + P + YA+ +
Sbjct: 16 LALLQSC-SSFSDLKIIHGFLLRTHL-ISDVFVASRLLALCVDDSTFNKPTNLLGYAYGI 73
Query: 104 FTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNV 163
F+ I+NPN+F +N +IR ++ +P A FY QM S + PD T+PFL+KA S+ V
Sbjct: 74 FSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECV 133
Query: 164 REGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR------------ 211
GE HS ++ GF++ V+V NSL+H+YA CG +A ++F M R
Sbjct: 134 LVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGY 193
Query: 212 ------------------------------FALNGRPNEALTLFREMSANGVEPDGFTVV 241
+A N +A+ LF M GV + +V
Sbjct: 194 CKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMV 253
Query: 242 SLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEER 301
S++S+CA LGALE G R + Y++K+ + NL + AL+D++ +CG I +A VF + E
Sbjct: 254 SVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPET 313
Query: 302 NVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYF 361
+ +SW+++I GLAV+G P ++TF VL ACSH G++++G + +
Sbjct: 314 DSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIY 373
Query: 362 RRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGH 421
MK+++GI PR+EHYGC+VD+L RAG + +A +I M V+PNA I LLGAC I+ +
Sbjct: 374 ENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKN 433
Query: 422 LSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVE 481
+ E + L+K++P+HSG YVLLSN+YA +W ++++R M + VKK PG+SL+E
Sbjct: 434 TEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIE 493
Query: 482 LGNRVYEFTMG-DRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLADIEEEEKEQALSY 540
+ ++ +FTMG D+ HP+ + GY T + D++EEEKE ++
Sbjct: 494 IDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHM 553
Query: 541 HSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDREIVIRDRSRFHHFRG 600
HSEK+AIA+ ++ T PGT IR++KNLRVC DCH KLIS+VY RE+++RDR+RFHHFR
Sbjct: 554 HSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRN 613
Query: 601 GKCSCKDYW 609
G CSC+DYW
Sbjct: 614 GVCSCRDYW 622
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 436 bits (1122), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/523 (42%), Positives = 326/523 (62%), Gaps = 13/523 (2%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A +F I +V +WN MI GYAE+ + K AL ++ M + V PD T ++ A ++
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 278
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRP- 218
S ++ G +H +GF S + + N+L+ +Y+ CG+ E+A +FE + + ++
Sbjct: 279 SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTL 338
Query: 219 ----------NEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLK--A 266
EAL LF+EM +G P+ T++S+L ACA LGA+++GR +HVY+ K
Sbjct: 339 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK 398
Query: 267 GLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXX 326
G+ + +L+D+YAKCG I A QVF + +++ SW +I G A++G
Sbjct: 399 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLF 458
Query: 327 XXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSR 386
+ P +ITFVG+L ACSH GMLD G FR M ++Y + P++EHYGCM+DLL
Sbjct: 459 SRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGH 518
Query: 387 AGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLL 446
+GL K+A E I M ++P+ VIW +LL AC +HG++ LGE +L+K+EP++ G YVLL
Sbjct: 519 SGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLL 578
Query: 447 SNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXX 506
SN+YAS RW +V R + G+KK PG S +E+ + V+EF +GD+ HP+++++Y
Sbjct: 579 SNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 638
Query: 507 XXXXXXXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNL 566
G+VP T VL ++EEE KE AL +HSEK+AIAF L++T PGT + ++KNL
Sbjct: 639 EEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNL 698
Query: 567 RVCADCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
RVC +CH A KLISK+Y REI+ RDR+RFHHFR G CSC DYW
Sbjct: 699 RVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 204/415 (49%), Gaps = 46/415 (11%)
Query: 50 ISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLS-APMSYAHLVFTMIR 108
+SLL C + + L+ IHA I+ G+ N + K + F I+S + YA VF I+
Sbjct: 37 LSLLHNCKTLQ-SLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQ 95
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
PN+ WNTM RG+A S DP AL Y M + P+++T+PF+LK+ +KS +EG+
Sbjct: 96 EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE---------------------- 206
+H +K G + ++V SL+ +Y G E AHKVF+
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 215
Query: 207 --------------------SMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSA 246
+M +A G EAL LF++M V PD T+V+++SA
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
Query: 247 CAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSW 306
CA+ G++ELGR+VH+++ G NL +VNAL+DLY+KCG + A +F + ++V+SW
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISW 335
Query: 307 TTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEG-FDYFRRMK 365
TLI G P ++T + +L AC+H G +D G + + K
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395
Query: 366 EEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHG 420
G+ ++D+ ++ G ++ A++ + N + + W ++ +HG
Sbjct: 396 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQ-VFNSILHKSLSSWNAMIFGFAMHG 449
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 436 bits (1121), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/572 (40%), Positives = 336/572 (58%), Gaps = 20/572 (3%)
Query: 57 ASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAP--MSYAHLVFTMIRNPNVFT 114
++ K L+QIHA +R + + N D+ H + + P ++Y+ VF+ NP +
Sbjct: 21 STGKLHLRQIHALLLRTSL-IRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSH 79
Query: 115 WNTMIRGYAESQDPKPALHFYRQMTMSCVEP-DTHTYPFLLKAVSKSLNVREGEALHSVT 173
NTMIR ++ SQ P +R + + P + + F LK KS ++ G +H
Sbjct: 80 CNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKI 139
Query: 174 IKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEAL 222
+GF S + +L+ +Y+ C ++ A KVF+ + R + N R + L
Sbjct: 140 FSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVL 199
Query: 223 TLFREMSAN---GVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALL 279
LF +M + V+PDG T + L ACA LGAL+ G++VH ++ + GL L++ N L+
Sbjct: 200 VLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLV 259
Query: 280 DLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEI 339
+Y++CGS+ +A QVF M ERNVVSWT LI GLA+NGFG ++P E
Sbjct: 260 SMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQ 319
Query: 340 TFVGVLYACSHCGMLDEGFDYFRRMKE-EYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQ 398
T G+L ACSH G++ EG +F RM+ E+ I P + HYGC+VDLL RA L+ +AY I+
Sbjct: 320 TLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIK 379
Query: 399 NMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTD 458
+M ++P++ IWRTLLGAC +HG + LGE SHL++L+ + +GDYVLL N Y++ +W
Sbjct: 380 SMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEK 439
Query: 459 VQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGY 518
V +R M + + PG S +EL V+EF + D SHP+ +++Y GY
Sbjct: 440 VTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGY 499
Query: 519 VPRTENVLADIE-EEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIK 577
V + L ++E EEEK AL YHSEK+AIAF +L T PGT IRV KNLR C DCH K
Sbjct: 500 VAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAK 559
Query: 578 LISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
+S VYDR +++RDRSRFHHF+GG CSC D+W
Sbjct: 560 FVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 434 bits (1115), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/551 (39%), Positives = 322/551 (58%), Gaps = 44/551 (7%)
Query: 103 VFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLN 162
VFT I+ +V +WN+MI G+ + P AL +++M V+ T +L A +K N
Sbjct: 188 VFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRN 247
Query: 163 VREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR----------- 211
+ G + S +N + + N++L +Y CG E A ++F++M ++
Sbjct: 248 LEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDG 307
Query: 212 -------------------------------FALNGRPNEALTLFREMS-ANGVEPDGFT 239
+ NG+PNEAL +F E+ ++ + T
Sbjct: 308 YAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQIT 367
Query: 240 VVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEME 299
+VS LSACA++GALELGR +H Y+ K G+R N HV +AL+ +Y+KCG + ++++VF +E
Sbjct: 368 LVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE 427
Query: 300 ERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFD 359
+R+V W+ +I GLA++G G + P +TF V ACSH G++DE
Sbjct: 428 KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAES 487
Query: 360 YFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIH 419
F +M+ YGI P +HY C+VD+L R+G +++A ++I+ MP+ P+ +W LLGAC IH
Sbjct: 488 LFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIH 547
Query: 420 GHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSL 479
+L+L E+A + LL+LEP++ G +VLLSN+YA +W +V +RK M G+KK PG S
Sbjct: 548 ANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSS 607
Query: 480 VELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLADIEEEE-KEQAL 538
+E+ ++EF GD +HP S+ VY GY P VL IEEEE KEQ+L
Sbjct: 608 IEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSL 667
Query: 539 SYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDREIVIRDRSRFHHF 598
+ HSEK+AI + L++T IRV+KNLRVC DCH KLIS++YDREI++RDR RFHHF
Sbjct: 668 NLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHF 727
Query: 599 RGGKCSCKDYW 609
R G+CSC D+W
Sbjct: 728 RNGQCSCNDFW 738
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 134/417 (32%), Positives = 215/417 (51%), Gaps = 51/417 (12%)
Query: 50 ISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLS--APMSYAHLVFTMI 107
ISL++ C S + +LKQ H IR G +P L F + +LS A + YA VF I
Sbjct: 34 ISLIERCVSLR-QLKQTHGHMIRTGT-FSDPYSASKL-FAMAALSSFASLEYARKVFDEI 90
Query: 108 RNPNVFTWNTMIRGYAESQDPKPAL-HFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREG 166
PN F WNT+IR YA DP ++ F ++ S P+ +T+PFL+KA ++ ++ G
Sbjct: 91 PKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLG 150
Query: 167 EALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVF-----------ESMTDRFALN 215
++LH + +K+ S VFV NSL+H Y +CGD +SA KVF SM + F
Sbjct: 151 QSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 210
Query: 216 GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVV 275
G P++AL LF++M + V+ T+V +LSACA++ LE GR+V Y+ + + NL +
Sbjct: 211 GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLA 270
Query: 276 NALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAV-------------------- 315
NA+LD+Y KCGSI +A+++F MEE++ V+WTT++ G A+
Sbjct: 271 NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIV 330
Query: 316 -----------NGFGXXXXXXXXXXXXQK-LAPGEITFVGVLYACSHCGMLDEGFDYFRR 363
NG QK + +IT V L AC+ G L+ G +
Sbjct: 331 AWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG-RWIHS 389
Query: 364 MKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHG 420
+++GI ++ + S+ G ++++ E ++ + + +W ++G +HG
Sbjct: 390 YIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHG 445
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 84/175 (48%), Gaps = 12/175 (6%)
Query: 92 SLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMS-CVEPDTHTY 150
++S A V + ++ WN +I Y ++ P AL + ++ + ++ + T
Sbjct: 309 AISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITL 368
Query: 151 PFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTD 210
L A ++ + G +HS K+G V ++L+H+Y+ CGD E + +VF S+
Sbjct: 369 VSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEK 428
Query: 211 R-----------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALE 254
R A++G NEA+ +F +M V+P+G T ++ AC+ G ++
Sbjct: 429 RDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVD 483
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 431 bits (1109), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/605 (37%), Positives = 344/605 (56%), Gaps = 63/605 (10%)
Query: 57 ASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAH--------LVFTMIR 108
+ S ++ QIHA +RH + LH + +++L +YA +F
Sbjct: 39 SQSVDEVLQIHAAILRHNLLLHPR-------YPVLNLKLHRAYASHGKIRHSLALFHQTI 91
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
+P++F + I + + A Y Q+ S + P+ T+ LLK+ S + G+
Sbjct: 92 DPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS----TKSGKL 147
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR----------------- 211
+H+ +K G +V L+ +YA GD SA KVF+ M +R
Sbjct: 148 IHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGN 207
Query: 212 -------------------------FALNGRPNEALTLFREMSANGV-EPDGFTVVSLLS 245
+A +G PN+AL LF+++ A G +PD TVV+ LS
Sbjct: 208 VEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALS 267
Query: 246 ACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVS 305
AC+++GALE GR +HV++ + +R N+ V L+D+Y+KCGS+ EA VF + +++V+
Sbjct: 268 ACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVA 327
Query: 306 WTTLIVGLAVNGFGXXXXXXXXXXX-XQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRM 364
W +I G A++G+ L P +ITF+G L AC+H G+++EG F M
Sbjct: 328 WNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESM 387
Query: 365 KEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSL 424
+EYGI P+IEHYGC+V LL RAG +K+AYE I+NM + ++V+W ++LG+C +HG L
Sbjct: 388 GQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVL 447
Query: 425 GEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGN 484
G+ +L+ L K+SG YVLLSN+YAS + V +R M + G+ K PG S +E+ N
Sbjct: 448 GKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIEN 507
Query: 485 RVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLADIEEEEKEQALSYHSEK 544
+V+EF GDR H +S+++Y GYVP T VL D+EE EKEQ+L HSE+
Sbjct: 508 KVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSER 567
Query: 545 VAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCS 604
+AIA+ L++T PG+P+++ KNLRVC+DCH KLISK+ R+IV+RDR+RFHHF G CS
Sbjct: 568 LAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCS 627
Query: 605 CKDYW 609
C D+W
Sbjct: 628 CGDFW 632
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 429 bits (1104), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/521 (42%), Positives = 312/521 (59%), Gaps = 16/521 (3%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
AH +F + NV +W TMI Y++ + + AL M V P+ +TY +L++ +
Sbjct: 115 AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNG 174
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-------- 211
+VR LH IK G ES VFVR++L+ ++A G+ E A VF+ M
Sbjct: 175 MSDVR---MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSI 231
Query: 212 ---FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGL 268
FA N R + AL LF+ M G + T+ S+L AC L LELG + HV+++K
Sbjct: 232 IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD- 290
Query: 269 RENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXX 328
++L + NAL+D+Y KCGS+ +A +VF +M+ER+V++W+T+I GLA NG+
Sbjct: 291 -QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFER 349
Query: 329 XXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAG 388
P IT VGVL+ACSH G+L++G+ YFR MK+ YGI P EHYGCM+DLL +AG
Sbjct: 350 MKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAG 409
Query: 389 LVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSN 448
+ A + + M +P+AV WRTLLGAC + ++ L E A ++ L+P+ +G Y LLSN
Sbjct: 410 KLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSN 469
Query: 449 LYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXX 508
+YA+ ++W V+ IR M G+KK PG S +E+ +++ F +GD SHPQ +V
Sbjct: 470 IYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQ 529
Query: 509 XXXXXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRV 568
GYVP T VL D+E E+ E +L +HSEK+A+AF L+ IR+ KNLR+
Sbjct: 530 LIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRI 589
Query: 569 CADCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
C DCH+ KL SK+ R IVIRD R+HHF+ GKCSC DYW
Sbjct: 590 CGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 133/327 (40%), Gaps = 55/327 (16%)
Query: 146 DTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVF 205
D+ TY L+K + V EG + NG ++F+ N L+++Y AH++F
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 206 ESMTDRFALNGRP-----------NEALTLFREMSANGVEPDGFTVVSLLSACAELGALE 254
+ M R ++ +AL L M + V P+ +T S+L +C + +
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV- 178
Query: 255 LGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLA 314
R +H ++K GL ++ V +AL+D++AK G +A VF EM + + W ++I G A
Sbjct: 179 --RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 236
Query: 315 VNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACS------------------------- 349
N + T VL AC+
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILN 296
Query: 350 --------HCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQA---YEYIQ 398
CG L++ F +MKE I + M+ L++ G ++A +E ++
Sbjct: 297 NALVDMYCKCGSLEDALRVFNQMKERDVIT-----WSTMISGLAQNGYSQEALKLFERMK 351
Query: 399 NMPVQPNAVIWRTLLGACTIHGHLSLG 425
+ +PN + +L AC+ G L G
Sbjct: 352 SSGTKPNYITIVGVLFACSHAGLLEDG 378
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 221 ALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLD 280
A+ + ++G+ D T L+ C A+ G + +L G R + +VN L++
Sbjct: 45 AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLIN 104
Query: 281 LYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEIT 340
+Y K + +A Q+F +M +RNV+SWTT+I + + P T
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164
Query: 341 FVGVLYACS--------HCGMLDEGF--DYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLV 390
+ VL +C+ HCG++ EG D F R ++D+ ++ G
Sbjct: 165 YSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVR--------------SALIDVFAKLGEP 210
Query: 391 KQAYEYIQNMPVQPNAVIWRTLLGA 415
+ A M V +A++W +++G
Sbjct: 211 EDALSVFDEM-VTGDAIVWNSIIGG 234
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 429 bits (1103), Expect = e-120, Method: Compositional matrix adjust.
Identities = 203/518 (39%), Positives = 312/518 (60%), Gaps = 11/518 (2%)
Query: 103 VFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLN 162
VF ++ +V ++NT+I GYA+S + AL R+M + ++PD+ T +L S+ ++
Sbjct: 198 VFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVD 257
Query: 163 VREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE-----------SMTDR 211
V +G+ +H I+ G +S V++ +SL+ +YA E + +VF S+
Sbjct: 258 VIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAG 317
Query: 212 FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLREN 271
+ NGR NEAL LFR+M V+P S++ ACA L L LG+++H Y+L+ G N
Sbjct: 318 YVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSN 377
Query: 272 LHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXX 331
+ + +AL+D+Y+KCG+I+ A+++F M + VSWT +I+G A++G G
Sbjct: 378 IFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKR 437
Query: 332 QKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVK 391
Q + P ++ FV VL ACSH G++DE + YF M + YG+ +EHY + DLL RAG ++
Sbjct: 438 QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE 497
Query: 392 QAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYA 451
+AY +I M V+P +W TLL +C++H +L L E + ++ ++ G YVL+ N+YA
Sbjct: 498 EAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYA 557
Query: 452 SERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXX 511
S RW ++ +R M + G++K P S +E+ N+ + F GDRSHP +
Sbjct: 558 SNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVME 617
Query: 512 XXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCAD 571
GYV T VL D++EE K + L HSE++A+AF ++NT PGT IRV KN+R+C D
Sbjct: 618 QMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTD 677
Query: 572 CHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
CH+AIK ISK+ +REI++RD SRFHHF G CSC DYW
Sbjct: 678 CHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 188/413 (45%), Gaps = 58/413 (14%)
Query: 59 SKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTM 118
SK + KQ+HA IR H ++ +I + + A L+F +++P V W ++
Sbjct: 20 SKSQAKQLHAQFIRTQSLSHTS---ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSV 76
Query: 119 IRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGF 178
IR + + AL + +M S PD + +P +LK+ + +++R GE++H ++ G
Sbjct: 77 IRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGM 136
Query: 179 ESLVFVRNSLLHIYAA-----------------------CGD-------------TESAH 202
+ ++ N+L+++YA GD +S
Sbjct: 137 DCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVR 196
Query: 203 KVFESMTDR-----------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELG 251
+VFE M + +A +G +AL + REM ++PD FT+ S+L +E
Sbjct: 197 RVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYV 256
Query: 252 ALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIV 311
+ G+ +H Y+++ G+ ++++ ++L+D+YAK I ++++VF + R+ +SW +L+
Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVA 316
Query: 312 GLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEG---FDYFRRMKEEY 368
G NG K+ PG + F V+ AC+H L G Y R
Sbjct: 317 GYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRG---- 372
Query: 369 GIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGH 421
G I +VD+ S+ G +K A + M V + V W ++ +HGH
Sbjct: 373 GFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVL-DEVSWTAIIMGHALHGH 424
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 138/267 (51%), Gaps = 15/267 (5%)
Query: 62 KLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRG 121
K K+IH + IR G+ + +G L+ + + SA + + VF+ + + +WN+++ G
Sbjct: 260 KGKEIHGYVIRKGID-SDVYIGSSLV-DMYAKSARIEDSERVFSRLYCRDGISWNSLVAG 317
Query: 122 YAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESL 181
Y ++ AL +RQM + V+P + ++ A + + G+ LH ++ GF S
Sbjct: 318 YVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSN 377
Query: 182 VFVRNSLLHIYAACGDTESAHKVFESMT--DRF---------ALNGRPNEALTLFREMSA 230
+F+ ++L+ +Y+ CG+ ++A K+F+ M D AL+G +EA++LF EM
Sbjct: 378 IFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKR 437
Query: 231 NGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKA-GLRENLHVVNALLDLYAKCGSIR 289
GV+P+ V++L+AC+ +G ++ + K GL + L A+ DL + G +
Sbjct: 438 QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE 497
Query: 290 EAQQVFGEM-EERNVVSWTTLIVGLAV 315
EA +M E W+TL+ +V
Sbjct: 498 EAYNFISKMCVEPTGSVWSTLLSSCSV 524
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 427 bits (1097), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/605 (37%), Positives = 344/605 (56%), Gaps = 47/605 (7%)
Query: 50 ISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRN 109
I+LL + K +++QIHA G + +G + +S + YA+ +
Sbjct: 10 IALLDSGITFK-EVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEK 68
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSC--VEPDTHTYPFLLKAVSKSLNVRE-G 166
P +F N+MIR + +S P+ + FYR++ S ++PD +T FL++A + L +RE G
Sbjct: 69 PTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACT-GLRMRETG 127
Query: 167 EALHSVTIKNGFESLVFVRNSLLHIYAA-------------------------------C 195
+H +TI+ GF++ V+ L+ +YA C
Sbjct: 128 LQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARC 187
Query: 196 GDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMSANGVEPDGFTVVSLL 244
GD A K+FE M +R +A G EAL +F M GV+ +G ++S+L
Sbjct: 188 GDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVL 247
Query: 245 SACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVV 304
SAC +LGAL+ GR H Y+ + ++ + + L+DLYAKCG + +A +VF MEE+NV
Sbjct: 248 SACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVY 307
Query: 305 SWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRM 364
+W++ + GLA+NGFG + P +TFV VL CS G +DEG +F M
Sbjct: 308 TWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSM 367
Query: 365 KEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSL 424
+ E+GI P++EHYGC+VDL +RAG ++ A IQ MP++P+A +W +LL A ++ +L L
Sbjct: 368 RNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLEL 427
Query: 425 GEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGN 484
G +A +L+LE + G YVLLSN+YA W +V +R+SM GV+K PG S++E+
Sbjct: 428 GVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNG 487
Query: 485 RVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLADIEEEEKEQALSYHSEK 544
V+EF +GD+SHP+ + A GY T V+ DI+EEEKE AL HSEK
Sbjct: 488 EVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEK 547
Query: 545 VAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCS 604
AIAF +++ PIR++KNLRVC DCH +ISK+++REI++RDR+RFHHF+ G CS
Sbjct: 548 AAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCS 607
Query: 605 CKDYW 609
C +W
Sbjct: 608 CNGFW 612
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 135/285 (47%), Gaps = 28/285 (9%)
Query: 43 PHVLTKCISLLQY--CASSKHKLKQIHAFSIRHGVPLHNPD-MGKHLIFTIVSLSAPMSY 99
PHV T ISL C S HK + + +P PD + + + T + + +
Sbjct: 143 PHVQTGLISLYAELGCLDSCHK--------VFNSIPC--PDFVCRTAMVTACARCGDVVF 192
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A +F + + WN MI GYA+ + + AL+ + M + V+ + +L A ++
Sbjct: 193 ARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQ 252
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-------- 211
+ +G HS +N + V + +L+ +YA CGD E A +VF M ++
Sbjct: 253 LGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSA 312
Query: 212 ---FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKA-- 266
A+NG + L LF M +GV P+ T VS+L C+ +G ++ G+R H ++
Sbjct: 313 LNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQR-HFDSMRNEF 371
Query: 267 GLRENLHVVNALLDLYAKCGSIREAQQVFGEMEER-NVVSWTTLI 310
G+ L L+DLYA+ G + +A + +M + + W++L+
Sbjct: 372 GIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 423 bits (1087), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/561 (38%), Positives = 318/561 (56%), Gaps = 48/561 (8%)
Query: 97 MSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKA 156
++YA VF + + +V TWNTMI Y A + +M S V PD ++ A
Sbjct: 162 INYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSA 221
Query: 157 VSKSLNVREGEALHSVTIKNG---------------------------FESL----VFVR 185
++ N+R A++ I+N F + +FV
Sbjct: 222 CGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVS 281
Query: 186 NSLLHIYAACGDTESAHKVFE-----------SMTDRFALNGRPNEALTLFREMSANGVE 234
+++ Y+ CG + A +F+ +M + + P EAL +F EM +G++
Sbjct: 282 TAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIK 341
Query: 235 PDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQV 294
PD ++ S++SACA LG L+ + VH + GL L + NAL+++YAKCG + + V
Sbjct: 342 PDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDV 401
Query: 295 FGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGML 354
F +M RNVVSW+++I L+++G + + P E+TFVGVLY CSH G++
Sbjct: 402 FEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLV 461
Query: 355 DEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLG 414
+EG F M +EY I P++EHYGCMVDL RA L+++A E I++MPV N VIW +L+
Sbjct: 462 EEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMS 521
Query: 415 ACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKT 474
AC IHG L LG+ A +L+LEP H G VL+SN+YA E+RW DV+ IR+ M + V K
Sbjct: 522 ACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKE 581
Query: 475 PGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLADIEEEEK 534
G S ++ + +EF +GD+ H QS ++YA GYVP +VL D+EEEEK
Sbjct: 582 KGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEK 641
Query: 535 EQALSYHSEKVAIAFMLLNTAPGTP------IRVMKNLRVCADCHMAIKLISKVYDREIV 588
+ + +HSEK+A+ F L+N IR++KNLRVC DCH+ KL+SKVY+REI+
Sbjct: 642 KDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREII 701
Query: 589 IRDRSRFHHFRGGKCSCKDYW 609
+RDR+RFH ++ G CSC+DYW
Sbjct: 702 VRDRTRFHCYKNGLCSCRDYW 722
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 192/431 (44%), Gaps = 52/431 (12%)
Query: 53 LQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMS-YAHLVFTMIRNP- 110
L +C S H +KQ+HA +R + N + L VS S+ YA VF+ I +P
Sbjct: 19 LSFCKSLNH-IKQLHAHILRTVI---NHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPP 74
Query: 111 NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALH 170
+N +R + S +P+ + FY+++ D ++ +LKAVSK + EG LH
Sbjct: 75 ESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELH 134
Query: 171 SVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMT-----------DRFALNGRPN 219
V K FV + +YA+CG A VF+ M+ +R+ G +
Sbjct: 135 GVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVD 194
Query: 220 EALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALL 279
EA LF EM + V PD + +++SAC G + R ++ +L++ +R + H++ AL+
Sbjct: 195 EAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALV 254
Query: 280 DLYA-------------------------------KCGSIREAQQVFGEMEERNVVSWTT 308
+YA KCG + +AQ +F + E++++V WTT
Sbjct: 255 TMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTT 314
Query: 309 LIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEY 368
+I + + + P ++ V+ AC++ G+LD+ +
Sbjct: 315 MISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA-KWVHSCIHVN 373
Query: 369 GIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLS--LGE 426
G+ + ++++ ++ G + + + MP + N V W +++ A ++HG S L
Sbjct: 374 GLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMHGEASDALSL 432
Query: 427 IARSHLLKLEP 437
AR +EP
Sbjct: 433 FARMKQENVEP 443
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 423 bits (1087), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/559 (39%), Positives = 320/559 (57%), Gaps = 18/559 (3%)
Query: 64 KQIHAFSIRHGVPLHN--PDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRG 121
KQ+H H + ++N + S + M A ++F N ++ WN M+ G
Sbjct: 437 KQVHV----HAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAG 491
Query: 122 YAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESL 181
Y +S D L + M D T + K + +G+ +H+ IK+G++
Sbjct: 492 YTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLD 551
Query: 182 VFVRNSLLHIYAACGDTESAHKVFESMT--DRFAL---------NGRPNEALTLFREMSA 230
++V + +L +Y CGD +A F+S+ D A NG A +F +M
Sbjct: 552 LWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRL 611
Query: 231 NGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIRE 290
GV PD FT+ +L A + L ALE GR++H LK + V +L+D+YAKCGSI +
Sbjct: 612 MGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDD 671
Query: 291 AQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSH 350
A +F +E N+ +W ++VGLA +G G + P ++TF+GVL ACSH
Sbjct: 672 AYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSH 731
Query: 351 CGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWR 410
G++ E + + R M +YGI P IEHY C+ D L RAGLVKQA I++M ++ +A ++R
Sbjct: 732 SGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYR 791
Query: 411 TLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDG 470
TLL AC + G G+ + LL+LEP S YVLLSN+YA+ +W +++ R M
Sbjct: 792 TLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHK 851
Query: 471 VKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLADIE 530
VKK PG+S +E+ N+++ F + DRS+ Q++ +Y GYVP T+ L D+E
Sbjct: 852 VKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVE 911
Query: 531 EEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDREIVIR 590
EEEKE+AL YHSEK+A+AF LL+T P TPIRV+KNLRVC DCH A+K I+KVY+REIV+R
Sbjct: 912 EEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLR 971
Query: 591 DRSRFHHFRGGKCSCKDYW 609
D +RFH F+ G CSC DYW
Sbjct: 972 DANRFHRFKDGICSCGDYW 990
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 103/239 (43%), Gaps = 21/239 (8%)
Query: 111 NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALH 170
+V WN M++ Y E + A+ S + P+ T L + + + ++
Sbjct: 210 DVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFA 269
Query: 171 SVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMSA 230
+ + ++F RN G +E H +G+ + L F +M
Sbjct: 270 NGNDASSVSEIIF-RNK--------GLSEYLH------------SGQYSALLKCFADMVE 308
Query: 231 NGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIRE 290
+ VE D T + +L+ ++ +L LG++VH LK GL L V N+L+++Y K
Sbjct: 309 SDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGF 368
Query: 291 AQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACS 349
A+ VF M ER+++SW ++I G+A NG L P + T VL A S
Sbjct: 369 ARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 150 YPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMT 209
+ FL A++ S ++ G+ H+ + F+ N+L+ +Y+ CG A +VF+ M
Sbjct: 43 FGFLRNAITSS-DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 210 DR--------FALNGRPNE--------ALTLFREMSANGVEPDGFTVVSLLSACAELGAL 253
DR A + +E A LFR + + V T+ +L C G +
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 254 ELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGL 313
H Y K GL + V AL+++Y K G ++E + +F EM R+VV W ++
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAY 221
Query: 314 AVNGFGXXXXXXXXXXXXQKLAPGEITF 341
GF L P EIT
Sbjct: 222 LEMGFKEEAIDLSSAFHSSGLNPNEITL 249
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 422 bits (1086), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/578 (37%), Positives = 326/578 (56%), Gaps = 18/578 (3%)
Query: 43 PHVLTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHL 102
P +L CI L +QIH+ I+ L N + LI L + A
Sbjct: 494 PSILKTCIRL-----GDLELGEQIHSQIIKTNFQL-NAYVCSVLIDMYAKL-GKLDTAWD 546
Query: 103 VFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLN 162
+ +V +W TMI GY + AL +RQM + D + A +
Sbjct: 547 ILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQA 606
Query: 163 VREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE-----------SMTDR 211
++EG+ +H+ +GF S + +N+L+ +Y+ CG E ++ FE ++
Sbjct: 607 LKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSG 666
Query: 212 FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLREN 271
F +G EAL +F M+ G++ + FT S + A +E ++ G++VH + K G
Sbjct: 667 FQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSE 726
Query: 272 LHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXX 331
V NAL+ +YAKCGSI +A++ F E+ +N VSW +I + +GFG
Sbjct: 727 TEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIH 786
Query: 332 QKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVK 391
+ P +T VGVL ACSH G++D+G YF M EYG++P+ EHY C+VD+L+RAGL+
Sbjct: 787 SNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLS 846
Query: 392 QAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYA 451
+A E+IQ MP++P+A++WRTLL AC +H ++ +GE A HLL+LEP+ S YVLLSNLYA
Sbjct: 847 RAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYA 906
Query: 452 SERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXX 511
++W R+ M + GVKK PG S +E+ N ++ F +GD++HP + +++
Sbjct: 907 VSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTK 966
Query: 512 XXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCAD 571
GYV ++L +++ E+K+ + HSEK+AI+F LL+ PI VMKNLRVC D
Sbjct: 967 RASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCND 1026
Query: 572 CHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
CH IK +SKV +REI++RD RFHHF GG CSCKDYW
Sbjct: 1027 CHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 173/392 (44%), Gaps = 16/392 (4%)
Query: 41 PLPHVLTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYA 100
P P+ + +S + S + +Q+H ++ G + + L+ L +S
Sbjct: 286 PTPYAFSSVLSACKKIESLEIG-EQLHGLVLKLGFS-SDTYVCNALVSLYFHLGNLISAE 343
Query: 101 HLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKS 160
H +F+ + + T+NT+I G ++ + A+ +++M + +EPD++T L+ A S
Sbjct: 344 H-IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSAD 402
Query: 161 LNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVF-----------ESMT 209
+ G+ LH+ T K GF S + +LL++YA C D E+A F M
Sbjct: 403 GTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVML 462
Query: 210 DRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLR 269
+ L + +FR+M + P+ +T S+L C LG LELG ++H ++K +
Sbjct: 463 VAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQ 522
Query: 270 ENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXX 329
N +V + L+D+YAK G + A + ++VVSWTT+I G F
Sbjct: 523 LNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQM 582
Query: 330 XXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGL 389
+ + E+ + AC+ L EG G + + +V L SR G
Sbjct: 583 LDRGIRSDEVGLTNAVSACAGLQALKEG-QQIHAQACVSGFSSDLPFQNALVTLYSRCGK 641
Query: 390 VKQAYEYIQNMPVQPNAVIWRTLLGACTIHGH 421
++++Y + N + W L+ G+
Sbjct: 642 IEESYLAFEQTEAGDN-IAWNALVSGFQQSGN 672
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 153/341 (44%), Gaps = 14/341 (4%)
Query: 87 IFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPD 146
+F + A VF + +FTWN MI+ A + +M V P+
Sbjct: 126 LFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPN 185
Query: 147 THTYPFLLKAV-SKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVF 205
T+ +L+A S+ E +H+ + G V N L+ +Y+ G + A +VF
Sbjct: 186 EGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVF 245
Query: 206 E-----------SMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALE 254
+ +M + N EA+ LF +M G+ P + S+LSAC ++ +LE
Sbjct: 246 DGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLE 305
Query: 255 LGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLA 314
+G ++H +LK G + +V NAL+ LY G++ A+ +F M +R+ V++ TLI GL+
Sbjct: 306 IGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLS 365
Query: 315 VNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRI 374
G+G L P T ++ ACS G L G + G A
Sbjct: 366 QCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG-QQLHAYTTKLGFASNN 424
Query: 375 EHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGA 415
+ G +++L ++ ++ A +Y V+ N V+W +L A
Sbjct: 425 KIEGALLNLYAKCADIETALDYFLETEVE-NVVLWNVMLVA 464
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 419 bits (1077), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/570 (39%), Positives = 332/570 (58%), Gaps = 55/570 (9%)
Query: 94 SAPMSYAHLVFTMIRNPNV--FTWNTMIRGYA---ESQDPKPALHFYRQMTMSCVEPDTH 148
+A ++YA+ +F IR+ + F WN +IR S + Y +M V PD H
Sbjct: 5 AAIIAYANPIFH-IRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFH 63
Query: 149 TYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFES- 207
T+PFLL + L++ G+ H+ + G + FVR SLL++Y++CGD SA +VF+
Sbjct: 64 TFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDS 123
Query: 208 -----------------------------------------MTDRFALNGRPNEALTLFR 226
+ + + + G+ EAL LFR
Sbjct: 124 GSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFR 183
Query: 227 EM-----SANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDL 281
EM + V P+ FT+ ++LSAC LGALE G+ VH Y+ K + ++ + AL+D+
Sbjct: 184 EMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDM 243
Query: 282 YAKCGSIREAQQVFGEM-EERNVVSWTTLIVGLAVNGF-GXXXXXXXXXXXXQKLAPGEI 339
YAKCGS+ A++VF + +++V +++ +I LA+ G + P +
Sbjct: 244 YAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSV 303
Query: 340 TFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQN 399
TFVG+L AC H G+++EG YF+ M EE+GI P I+HYGCMVDL R+GL+K+A +I +
Sbjct: 304 TFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIAS 363
Query: 400 MPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDV 459
MP++P+ +IW +LL + G + E A L++L+P +SG YVLLSN+YA RW +V
Sbjct: 364 MPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEV 423
Query: 460 QTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYV 519
+ IR M G+ K PG S VE+ V+EF +GD S +S+ +YA GYV
Sbjct: 424 KCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYV 483
Query: 520 PRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLI 579
T+ VL D+ E++KE ALSYHSEK+AIAF L+ T PGTP+R++KNLR+C DCH+ +K+I
Sbjct: 484 TDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMI 543
Query: 580 SKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
SK++ REIV+RD +RFHHFR G CSC+D+W
Sbjct: 544 SKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 418 bits (1074), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/560 (38%), Positives = 324/560 (57%), Gaps = 20/560 (3%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSA---PMSYAHLVFTMIRNPNVFTWNTMIR 120
K+IH +++R G D ++ +V + A + A +F + NV +WN+MI
Sbjct: 256 KEIHGYAMRSGF-----DSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMID 310
Query: 121 GYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFES 180
Y ++++PK A+ +++M V+P + L A + ++ G +H ++++ G +
Sbjct: 311 AYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDR 370
Query: 181 LVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMS 229
V V NSL+ +Y C + ++A +F + R FA NGRP +AL F +M
Sbjct: 371 NVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMR 430
Query: 230 ANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIR 289
+ V+PD FT VS+++A AEL + +H ++++ L +N+ V AL+D+YAKCG+I
Sbjct: 431 SRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIM 490
Query: 290 EAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACS 349
A+ +F M ER+V +W +I G +GFG + P +TF+ V+ ACS
Sbjct: 491 IARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACS 550
Query: 350 HCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIW 409
H G+++ G F MKE Y I ++HYG MVDLL RAG + +A+++I MPV+P ++
Sbjct: 551 HSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVY 610
Query: 410 RTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQD 469
+LGAC IH +++ E A L +L P G +VLL+N+Y + W V +R SML+
Sbjct: 611 GAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQ 670
Query: 470 GVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLADI 529
G++KTPG S+VE+ N V+ F G +HP S+ +YA GYVP T N++ +
Sbjct: 671 GLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDT-NLVLGV 729
Query: 530 EEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDREIVI 589
E + KEQ LS HSEK+AI+F LLNT GT I V KNLRVCADCH A K IS V REIV+
Sbjct: 730 ENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVV 789
Query: 590 RDRSRFHHFRGGKCSCKDYW 609
RD RFHHF+ G CSC DYW
Sbjct: 790 RDMQRFHHFKNGACSCGDYW 809
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 189/417 (45%), Gaps = 68/417 (16%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSA------PMSYAHLVFTMIRNPNVFTWNT 117
K+IH ++ G L +F + L ++ A VF + ++ +WNT
Sbjct: 155 KEIHGLLVKSGFSLD--------LFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNT 206
Query: 118 MIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNG 177
++ GY+++ + AL + M ++P T +L AVS + G+ +H +++G
Sbjct: 207 IVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSG 266
Query: 178 FESLVFVRNSLLHIYAACGDTESAHKVFE-----------SMTDRFALNGRPNEALTLFR 226
F+SLV + +L+ +YA CG E+A ++F+ SM D + N P EA+ +F+
Sbjct: 267 FDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQ 326
Query: 227 EMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCG 286
+M GV+P +V+ L ACA+LG LE GR +H ++ GL N+ VVN+L+ +Y KC
Sbjct: 327 KMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCK 386
Query: 287 SIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLY 346
+ A +FG+++ R +VSW +I+G A NG + + P T+V V+
Sbjct: 387 EVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVIT 446
Query: 347 ACSH-----------------------------------CGMLDEGFDYFRRMKEEYGIA 371
A + CG + F M E +
Sbjct: 447 AIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERH--- 503
Query: 372 PRIEHYGCMVDLLSRAGLVKQA---YEYIQNMPVQPNAVIWRTLLGACTIHGHLSLG 425
+ + M+D G K A +E +Q ++PN V + +++ AC+ G + G
Sbjct: 504 --VTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAG 558
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 175/353 (49%), Gaps = 15/353 (4%)
Query: 52 LLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPN 111
LL+ C+S K +L+QI ++G L+ + + ++ + A VF I +
Sbjct: 43 LLERCSSLK-ELRQILPLVFKNG--LYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 112 VFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHS 171
++TM++G+A+ D AL F+ +M VEP + + +LLK +R G+ +H
Sbjct: 100 NVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 172 VTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNE 220
+ +K+GF +F L ++YA C A KVF+ M +R ++ NG
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219
Query: 221 ALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLD 280
AL + + M ++P T+VS+L A + L + +G+ +H Y +++G +++ AL+D
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVD 279
Query: 281 LYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEIT 340
+YAKCGS+ A+Q+F M ERNVVSW ++I N + + P +++
Sbjct: 280 MYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 339
Query: 341 FVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQA 393
+G L+AC+ G L+ G + ++ E G+ + ++ + + V A
Sbjct: 340 VMGALHACADLGDLERG-RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTA 391
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 130/285 (45%), Gaps = 28/285 (9%)
Query: 148 HTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE- 206
H LL+ S +++E + + KNG F + L+ ++ G + A +VFE
Sbjct: 38 HPAALLLERCS---SLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEP 94
Query: 207 ----------SMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELG 256
+M FA ++AL F M + VEP + LL C + L +G
Sbjct: 95 IDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVG 154
Query: 257 RRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVN 316
+ +H L+K+G +L + L ++YAKC + EA++VF M ER++VSW T++ G + N
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQN 214
Query: 317 GFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPR--- 373
G + L P IT V VL A S ++ G KE +G A R
Sbjct: 215 GMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVG-------KEIHGYAMRSGF 267
Query: 374 ---IEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGA 415
+ +VD+ ++ G ++ A + M ++ N V W +++ A
Sbjct: 268 DSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVSWNSMIDA 311
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 418 bits (1074), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/570 (38%), Positives = 332/570 (58%), Gaps = 25/570 (4%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
K++HA+++++G N +G L+ + +S VF + + + WN MI GY+
Sbjct: 322 KELHAYALKNGSLDENSFVGSALVDMYCNCKQVLS-GRRVFDGMFDRKIGLWNAMIAGYS 380
Query: 124 ESQDPKPALHFYRQMTMSC-VEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLV 182
+++ K AL + M S + ++ T ++ A +S EA+H +K G +
Sbjct: 381 QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDR 440
Query: 183 FVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREM--- 228
FV+N+L+ +Y+ G + A ++F M DR + + +AL L +M
Sbjct: 441 FVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNL 500
Query: 229 --------SANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLD 280
S ++P+ T++++L +CA L AL G+ +H Y +K L ++ V +AL+D
Sbjct: 501 ERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVD 560
Query: 281 LYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEIT 340
+YAKCG ++ +++VF ++ ++NV++W +I+ ++G G Q + P E+T
Sbjct: 561 MYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVT 620
Query: 341 FVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNM 400
F+ V ACSH GM+DEG F MK +YG+ P +HY C+VDLL RAG +K+AY+ + M
Sbjct: 621 FISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMM 680
Query: 401 PVQPN-AVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDV 459
P N A W +LLGA IH +L +GEIA +L++LEP + YVLL+N+Y+S W
Sbjct: 681 PRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKA 740
Query: 460 QTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYV 519
+R++M + GV+K PG S +E G+ V++F GD SHPQS+ + GYV
Sbjct: 741 TEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYV 800
Query: 520 PRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLI 579
P T VL ++EE+EKE L HSEK+AIAF +LNT+PGT IRV KNLRVC DCH+A K I
Sbjct: 801 PDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFI 860
Query: 580 SKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
SK+ DREI++RD RFH F+ G CSC DYW
Sbjct: 861 SKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 130/258 (50%), Gaps = 16/258 (6%)
Query: 115 WNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTI 174
W ++R S + A+ Y M + ++PD + +P LLKAV+ ++ G+ +H+
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 175 KNGFE-SLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNG-----------RPNEAL 222
K G+ V V N+L+++Y CGD + +KVF+ +++R ++ + AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 223 TLFREMSANGVEPDGFTVVSLLSACAEL---GALELGRRVHVYLLKAGLRENLHVVNALL 279
FR M VEP FT+VS+++AC+ L L +G++VH Y L+ G N ++N L+
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLV 243
Query: 280 DLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEI 339
+Y K G + ++ + G R++V+W T++ L N + + P E
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 340 TFVGVLYACSHCGMLDEG 357
T VL ACSH ML G
Sbjct: 304 TISSVLPACSHLEMLRTG 321
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 166/406 (40%), Gaps = 36/406 (8%)
Query: 38 PENPLPHVLTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPM 97
P+N L K ++ LQ KQIHA + G + + + L+ +
Sbjct: 95 PDNYAFPALLKAVADLQ----DMELGKQIHAHVYKFGYGVDSVTVANTLV-NLYRKCGDF 149
Query: 98 SYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAV 157
+ VF I N +WN++I + + AL +R M VEP + T ++ A
Sbjct: 150 GAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTAC 209
Query: 158 SKSLNVREG----EALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-- 211
S +L + EG + +H+ ++ G E F+ N+L+ +Y G S+ + S R
Sbjct: 210 S-NLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDL 267
Query: 212 ---------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVY 262
N + EAL REM GVEPD FT+ S+L AC+ L L G+ +H Y
Sbjct: 268 VTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAY 327
Query: 263 LLKAG-LRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXX 321
LK G L EN V +AL+D+Y C + ++VF M +R + W +I G + N
Sbjct: 328 ALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKE 387
Query: 322 XXXXXXXXXXQK-LAPGEITFVGVLYACSHCGMLDE-----GFDYFRRMKEEYGIAPRIE 375
L T GV+ AC G GF R + + +
Sbjct: 388 ALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQ---- 443
Query: 376 HYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGH 421
++D+ SR G + A M + V W T++ H
Sbjct: 444 --NTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITGYVFSEH 486
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/564 (37%), Positives = 336/564 (59%), Gaps = 20/564 (3%)
Query: 62 KLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRG 121
+L+Q+HA I G + K + T+ + ++Y HL+F + P+ F +N++I+
Sbjct: 24 QLQQVHAHLIVTGYGRSRSLLTK--LITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKS 81
Query: 122 YAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESL 181
++ + P + +YR+M S V P +T+ ++K+ + +R G+ +H + +GF
Sbjct: 82 TSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLD 141
Query: 182 VFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMSA 230
+V+ +L+ Y+ CGD E A +VF+ M ++ F NG +EA+ +F +M
Sbjct: 142 TYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRE 201
Query: 231 NGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIRE 290
+G EPD T VSLLSACA+ GA+ LG VH Y++ GL N+ + AL++LY++CG + +
Sbjct: 202 SGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGK 261
Query: 291 AQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQ-KLAPGEITFVGVLYACS 349
A++VF +M+E NV +WT +I +G+G P +TFV VL AC+
Sbjct: 262 AREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACA 321
Query: 350 HCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAV-- 407
H G+++EG ++RM + Y + P +EH+ CMVD+L RAG + +AY++I + A
Sbjct: 322 HAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAP 381
Query: 408 -IWRTLLGACTIHGHLSLG-EIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKS 465
+W +LGAC +H + LG EIA+ L+ LEP + G +V+LSN+YA + +V IR
Sbjct: 382 ALWTAMLGACKMHRNYDLGVEIAK-RLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDG 440
Query: 466 MLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENV 525
M+++ ++K GYS++E+ N+ Y F+MGD SH ++ ++Y GY P +E V
Sbjct: 441 MMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEV 500
Query: 526 LADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDR 585
+ +EEEEKE AL YHSEK+A+AF LL T I ++KNLR+C DCH A K IS V +R
Sbjct: 501 MHQVEEEEKEFALRYHSEKLAVAFGLLKTVD-VAITIVKNLRICEDCHSAFKYISIVSNR 559
Query: 586 EIVIRDRSRFHHFRGGKCSCKDYW 609
+I +RD+ RFHHF+ G CSC DYW
Sbjct: 560 QITVRDKLRFHHFQNGSCSCLDYW 583
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 416 bits (1069), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/592 (37%), Positives = 330/592 (55%), Gaps = 31/592 (5%)
Query: 40 NPLPHVLTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSY 99
+ P + C SL S K +Q F + + + + + + S +
Sbjct: 77 SSFPCAIKACSSLFDI-FSGKQTHQQAFVFGYQSDIFVSSA------LIVMYSTCGKLED 129
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFL------ 153
A VF I N+ +W +MIRGY + + A+ ++ + + E D FL
Sbjct: 130 ARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVD--ENDDDDAMFLDSMGLV 187
Query: 154 --LKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGD--TESAHKVFESMT 209
+ A S+ E++HS IK GF+ V V N+LL YA G+ A K+F+ +
Sbjct: 188 SVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIV 247
Query: 210 DR-----------FALNGRPNEALTLFREMSANGVEP-DGFTVVSLLSACAELGALELGR 257
D+ +A +G NEA +FR + N V + T+ ++L A + GAL +G+
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGK 307
Query: 258 RVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNG 317
+H +++ GL +++ V +++D+Y KCG + A++ F M+ +NV SWT +I G ++G
Sbjct: 308 CIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHG 367
Query: 318 FGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHY 377
+ P ITFV VL ACSH G+ EG+ +F MK +G+ P +EHY
Sbjct: 368 HAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHY 427
Query: 378 GCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEP 437
GCMVDLL RAG +++AY+ IQ M ++P+++IW +LL AC IH ++ L EI+ + L +L+
Sbjct: 428 GCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDS 487
Query: 438 KHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHP 497
+ G Y+LLS++YA RW DV+ +R M G+ K PG+SL+EL V+ F +GD HP
Sbjct: 488 SNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHP 547
Query: 498 QSQDVYAXXXXXXXXXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPG 557
Q + +Y GYV T +V D++EEEKE L HSEK+AIAF ++NT PG
Sbjct: 548 QREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPG 607
Query: 558 TPIRVMKNLRVCADCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
+ + V+KNLRVC+DCH IKLISK+ DRE V+RD RFHHF+ G CSC DYW
Sbjct: 608 STVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 157/338 (46%), Gaps = 28/338 (8%)
Query: 107 IRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREG 166
+ +VF+WN++I A S D AL + M + P ++P +KA S ++ G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 167 EALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE-----------SMTDRFALN 215
+ H G++S +FV ++L+ +Y+ CG E A KVF+ SM + LN
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 216 GRPNEALTLFREM------SANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLR 269
G +A++LF+++ + + D +VS++SAC+ + A L +H +++K G
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 270 ENLHVVNALLDLYAKC--GSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXX 327
+ V N LLD YAK G + A+++F ++ +++ VS+ +++ A +G
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275
Query: 328 XXXXQKLAP-GEITFVGVLYACSHCGMLDEG---FDYFRRMKEEYGIAPRIEHYGCMVDL 383
K+ IT VL A SH G L G D RM G+ + ++D+
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM----GLEDDVIVGTSIIDM 331
Query: 384 LSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGH 421
+ G V+ A + M N W ++ +HGH
Sbjct: 332 YCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMHGH 368
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 416 bits (1069), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/518 (41%), Positives = 297/518 (57%), Gaps = 27/518 (5%)
Query: 97 MSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKA 156
+S A LV + +V +WN+++ GYA++Q AL R+M + D T LL A
Sbjct: 191 LSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA 250
Query: 157 VSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNG 216
VS + E++++V++ + + + + M + N
Sbjct: 251 VSNTTT----------------ENVMYVKDMFFKM------GKKSLVSWNVMIGVYMKNA 288
Query: 217 RPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVN 276
P EA+ L+ M A+G EPD ++ S+L AC + AL LG+++H Y+ + L NL + N
Sbjct: 289 MPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLEN 348
Query: 277 ALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAP 336
AL+D+YAKCG + +A+ VF M+ R+VVSWT +I +G G L P
Sbjct: 349 ALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVP 408
Query: 337 GEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEY 396
I FV L ACSH G+L+EG F+ M + Y I PR+EH CMVDLL RAG VK+AY +
Sbjct: 409 DSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRF 468
Query: 397 IQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRW 456
IQ+M ++PN +W LLGAC +H +G +A L +L P+ SG YVLLSN+YA RW
Sbjct: 469 IQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRW 528
Query: 457 TDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXX 516
+V IR M G+KK PG S VE+ ++ F +GDRSHPQS ++Y
Sbjct: 529 EEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKEL 588
Query: 517 GYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTA-----PGTPIRVMKNLRVCAD 571
GYVP +E+ L D+EEE+KE L+ HSEK+AI F L+NT IR+ KNLR+C D
Sbjct: 589 GYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGD 648
Query: 572 CHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
CH+A KLIS++ REI+IRD +RFH FR G CSC DYW
Sbjct: 649 CHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 128/290 (44%), Gaps = 18/290 (6%)
Query: 152 FLLKAVSKSL-NVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTD 210
FLL V + ++R +HS I + L+ YA+ D SA KVF+ + +
Sbjct: 43 FLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPE 102
Query: 211 R-----------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRV 259
R + NG E + +F M V PD +T +L AC+ G + +GR++
Sbjct: 103 RNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKI 162
Query: 260 HVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFG 319
H K GL L V N L+ +Y KCG + EA+ V EM R+VVSW +L+VG A N
Sbjct: 163 HGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRF 222
Query: 320 XXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGC 379
K++ T +L A S+ E Y + M + G + +
Sbjct: 223 DDALEVCREMESVKISHDAGTMASLLPAVSN--TTTENVMYVKDMFFKMGKKSLVS-WNV 279
Query: 380 MVDLLSRAGLVKQAYEYIQNMPV---QPNAVIWRTLLGACTIHGHLSLGE 426
M+ + + + +A E M +P+AV ++L AC LSLG+
Sbjct: 280 MIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGK 329
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 416 bits (1068), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/537 (39%), Positives = 311/537 (57%), Gaps = 21/537 (3%)
Query: 85 HLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVE 144
+ I T + S + A +F +VFTW M+ GY +++ + A + +M E
Sbjct: 254 NTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP----E 309
Query: 145 PDTHTYPFLLKAVSKSLNVREGEALHSVT-IKNGFESLVFVRNSLLHIYAACGDTESAHK 203
+ ++ +L + + + L V +N V N+++ YA CG A
Sbjct: 310 RNEVSWNAMLAGYVQGERMEMAKELFDVMPCRN-----VSTWNTMITGYAQCGKISEAKN 364
Query: 204 VFESMTDR-----------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGA 252
+F+ M R ++ +G EAL LF +M G + + S LS CA++ A
Sbjct: 365 LFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVA 424
Query: 253 LELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVG 312
LELG+++H L+K G V NALL +Y KCGSI EA +F EM +++VSW T+I G
Sbjct: 425 LELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAG 484
Query: 313 LAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAP 372
+ +GFG + L P + T V VL ACSH G++D+G YF M ++YG+ P
Sbjct: 485 YSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMP 544
Query: 373 RIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHL 432
+HY CMVDLL RAGL++ A+ ++NMP +P+A IW TLLGA +HG+ L E A +
Sbjct: 545 NSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKI 604
Query: 433 LKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMG 492
+EP++SG YVLLSNLYAS RW DV +R M GVKK PGYS +E+ N+ + F++G
Sbjct: 605 FAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVG 664
Query: 493 DRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLL 552
D HP+ +++A GYV +T VL D+EEEEKE+ + YHSE++A+A+ ++
Sbjct: 665 DEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIM 724
Query: 553 NTAPGTPIRVMKNLRVCADCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
+ G PIRV+KNLRVC DCH AIK ++++ R I++RD +RFHHF+ G CSC DYW
Sbjct: 725 RVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/580 (37%), Positives = 322/580 (55%), Gaps = 20/580 (3%)
Query: 42 LPHVLTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHL-IFTIVSLSAPMSYA 100
P VL C ASS+ +H+ ++ G N D+ + +I S S ++ A
Sbjct: 114 FPLVLKACTR-----ASSRKLGIDLHSLVVKCGF---NHDVAAMTSLLSIYSGSGRLNDA 165
Query: 101 HLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKS 160
H +F I + +V TW + GY S + A+ +++M V+PD++ +L A
Sbjct: 166 HKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHV 225
Query: 161 LNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR--------- 211
++ GE + + + FVR +L+++YA CG E A VF+SM ++
Sbjct: 226 GDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMI 285
Query: 212 --FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLR 269
+A N P E + LF +M ++PD F++V LS+CA LGAL+LG + +
Sbjct: 286 QGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFL 345
Query: 270 ENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXX 329
NL + NAL+D+YAKCG++ +VF EM+E+++V I GLA NG
Sbjct: 346 TNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQT 405
Query: 330 XXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGL 389
++P TF+G+L C H G++ +G +F + Y + +EHYGCMVDL RAG+
Sbjct: 406 EKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGM 465
Query: 390 VKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNL 449
+ AY I +MP++PNA++W LL C + L E L+ LEP ++G+YV LSN+
Sbjct: 466 LDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNI 525
Query: 450 YASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXX 509
Y+ RW + +R M + G+KK PGYS +EL +V+EF D+SHP S +YA
Sbjct: 526 YSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDL 585
Query: 510 XXXXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVC 569
G+VP TE V D+EEEEKE+ L YHSEK+A+A L++T G IRV+KNLRVC
Sbjct: 586 GNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVC 645
Query: 570 ADCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
DCH +KLISK+ REIV+RD +RFH F G CSC DYW
Sbjct: 646 GDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 214/452 (47%), Gaps = 29/452 (6%)
Query: 50 ISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRN 109
I L A + + LKQIH I H LH+ +L+ Y++L+F+ +
Sbjct: 16 IKTLISVACTVNHLKQIHVSLINH--HLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQF 73
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
PN+F +N++I G+ + L + + + T+P +LKA +++ + + G L
Sbjct: 74 PNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDL 133
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRP 218
HS+ +K GF V SLL IY+ G AHK+F+ + DR + +GR
Sbjct: 134 HSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRH 193
Query: 219 NEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNAL 278
EA+ LF++M GV+PD + +V +LSAC +G L+ G + Y+ + +++N V L
Sbjct: 194 REAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTL 253
Query: 279 LDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGE 338
++LYAKCG + +A+ VF M E+++V+W+T+I G A N F + L P +
Sbjct: 254 VNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQ 313
Query: 339 ITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQ 398
+ VG L +C+ G LD G ++ + + + + ++D+ ++ G + + +E +
Sbjct: 314 FSIVGFLSSCASLGALDLG-EWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFK 372
Query: 399 NMPVQPNAVIWRTLLGACTIHGH--LSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRW 456
M + + VI + +GH LS ++ L + P S LL
Sbjct: 373 EMK-EKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCG-------- 423
Query: 457 TDVQTIRKSMLQDGVKKTPGYSLVELGNRVYE 488
+ ++QDG++ S V R E
Sbjct: 424 ----CVHAGLIQDGLRFFNAISCVYALKRTVE 451
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/556 (37%), Positives = 323/556 (58%), Gaps = 16/556 (2%)
Query: 65 QIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAE 124
QIH+ + + G H+ + + ++ S + +F R P++ +N MI GY
Sbjct: 242 QIHSLATKTGCYSHDYVLTGFI--SLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTS 299
Query: 125 SQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFV 184
+ + + +L ++++ +S + T L+ V S ++ A+H +K+ F S V
Sbjct: 300 NGETELSLSLFKELMLSGARLRSST---LVSLVPVSGHLMLIYAIHGYCLKSNFLSHASV 356
Query: 185 RNSLLHIYAACGDTESAHKVFE-----------SMTDRFALNGRPNEALTLFREMSANGV 233
+L +Y+ + ESA K+F+ +M + NG +A++LFREM +
Sbjct: 357 STALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEF 416
Query: 234 EPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQ 293
P+ T+ +LSACA+LGAL LG+ VH + +++V AL+ +YAKCGSI EA++
Sbjct: 417 SPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARR 476
Query: 294 VFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGM 353
+F M ++N V+W T+I G ++G G + P +TF+ VLYACSH G+
Sbjct: 477 LFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGL 536
Query: 354 LDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLL 413
+ EG + F M YG P ++HY CMVD+L RAG +++A ++I+ M ++P + +W TLL
Sbjct: 537 VKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLL 596
Query: 414 GACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKK 473
GAC IH +L L +L+P + G +VLLSN+++++R + T+R++ + + K
Sbjct: 597 GACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAK 656
Query: 474 TPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLADIEEEE 533
PGY+L+E+G + FT GD+SHPQ +++Y GY P TE L D+EEEE
Sbjct: 657 APGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEE 716
Query: 534 KEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDREIVIRDRS 593
+E + HSE++AIAF L+ T PGT IR++KNLRVC DCH KLISK+ +R IV+RD +
Sbjct: 717 RELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDAN 776
Query: 594 RFHHFRGGKCSCKDYW 609
RFHHF+ G CSC DYW
Sbjct: 777 RFHHFKDGVCSCGDYW 792
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 139/274 (50%), Gaps = 15/274 (5%)
Query: 57 ASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWN 116
++S L Q HA I HG ++ + L + L A + YA +F ++ P+VF +N
Sbjct: 30 STSISHLAQTHAQIILHGFR-NDISLLTKLTQRLSDLGA-IYYARDIFLSVQRPDVFLFN 87
Query: 117 TMIRGYAESQDPKPALHFYRQMTMSC-VEPDTHTYPFLLKAVSKSLNVREGEALHSVTIK 175
++RG++ ++ P +L + + S ++P++ TY F + A S + R G +H +
Sbjct: 88 VLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVV 147
Query: 176 NGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTL 224
+G +S + + ++++ +Y E A KVF+ M ++ + N E++ +
Sbjct: 148 DGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQV 207
Query: 225 FREM-SANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYA 283
FR++ + + D T++ +L A AEL L LG ++H K G + +V+ + LY+
Sbjct: 208 FRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYS 267
Query: 284 KCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNG 317
KCG I+ +F E + ++V++ +I G NG
Sbjct: 268 KCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNG 301
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 412 bits (1058), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/575 (37%), Positives = 336/575 (58%), Gaps = 17/575 (2%)
Query: 50 ISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLI-FTIVSLSAPMSYAHLVFTMI- 107
+ +LQ C S K KL++IH+ I +G+ H+P + HL+ F VS++ +S+A L+F
Sbjct: 9 VRMLQGCNSMK-KLRKIHSHVIINGLQ-HHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFD 66
Query: 108 RNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVE-PDTHTYPFLLKAVSKSLNVREG 166
+P+ WN +IRG++ S P ++ FY +M +S V PD T+ F LK+ + ++ +
Sbjct: 67 SDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKC 126
Query: 167 EALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALN 215
+H I++GF V SL+ Y+A G E A KVF+ M R F+
Sbjct: 127 LEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHV 186
Query: 216 GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVV 275
G N+AL++++ M GV D +T+V+LLS+CA + AL +G +H + V
Sbjct: 187 GLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVS 246
Query: 276 NALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLA 335
NAL+D+YAKCGS+ A VF M +R+V++W ++I+G V+G G +
Sbjct: 247 NALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVR 306
Query: 336 PGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYE 395
P ITF+G+L CSH G++ EG ++F M ++ + P ++HYGCMVDL RAG ++ + E
Sbjct: 307 PNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLE 366
Query: 396 YIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERR 455
I + V+WRTLLG+C IH +L LGE+A L++LE ++GDYVL++++Y++
Sbjct: 367 MIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAAND 426
Query: 456 WTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXX 515
++RK + ++ PG+S +E+G++V++F + D+ HP+S +Y+
Sbjct: 427 AQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAIL 486
Query: 516 XGYVPRTENVLA-DIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHM 574
GY P N A + + A + HSEK+AIA+ L+ T GT +R+ KNLRVC DCH
Sbjct: 487 AGYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHS 546
Query: 575 AIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
K +SK ++REI++RDR RFHHF G CSC DYW
Sbjct: 547 FTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 409 bits (1050), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/559 (37%), Positives = 330/559 (59%), Gaps = 14/559 (2%)
Query: 63 LKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGY 122
LK++H +S++ ++N + + + + +SYA VF IR+ V +WN +I G+
Sbjct: 414 LKELHCYSLKQEF-VYNELVANAFVASYAKCGS-LSYAQRVFHGIRSKTVNSWNALIGGH 471
Query: 123 AESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLV 182
A+S DP+ +L + QM +S + PD+ T LL A SK ++R G+ +H I+N E +
Sbjct: 472 AQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDL 531
Query: 183 FVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMSAN 231
FV S+L +Y CG+ + +F++M D+ + NG P+ AL +FR+M
Sbjct: 532 FVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLY 591
Query: 232 GVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREA 291
G++ G +++ + AC+ L +L LGR H Y LK L ++ + +L+D+YAK GSI ++
Sbjct: 592 GIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQS 651
Query: 292 QQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHC 351
+VF ++E++ SW +I+G ++G P ++TF+GVL AC+H
Sbjct: 652 SKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHS 711
Query: 352 GMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYI-QNMPVQPNAVIWR 410
G++ EG Y +MK +G+ P ++HY C++D+L RAG + +A + + M + + IW+
Sbjct: 712 GLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWK 771
Query: 411 TLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDG 470
+LL +C IH +L +GE + L +LEP+ +YVLLSNLYA +W DV+ +R+ M +
Sbjct: 772 SLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMS 831
Query: 471 VKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLADIE 530
++K G S +EL +V+ F +G+R +++ + GY P T +V D+
Sbjct: 832 LRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLS 891
Query: 531 EEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDREIVIR 590
EEEK + L HSEK+A+ + L+ T+ GT IRV KNLR+C DCH A KLISKV +REIV+R
Sbjct: 892 EEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVR 951
Query: 591 DRSRFHHFRGGKCSCKDYW 609
D RFHHF+ G CSC DYW
Sbjct: 952 DNKRFHHFKNGVCSCGDYW 970
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 146/305 (47%), Gaps = 19/305 (6%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
++IH + L N D+ I T+ ++ + VF +R+ N+F WN +I Y+
Sbjct: 104 RKIHQL-VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYS 162
Query: 124 ESQDPKPALH-FYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLV 182
++ L F ++ + + PD TYP ++KA + +V G A+H + +K G V
Sbjct: 163 RNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDV 222
Query: 183 FVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREM-SA 230
FV N+L+ Y G A ++F+ M +R F+ NG E+ L EM
Sbjct: 223 FVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEE 282
Query: 231 NG---VEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGS 287
NG PD T+V++L CA + LG+ VH + +K L + L + NAL+D+Y+KCG
Sbjct: 283 NGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGC 342
Query: 288 IREAQQVFGEMEERNVVSWTTLIVGLAVNG--FGXXXXXXXXXXXXQKLAPGEITFVGVL 345
I AQ +F +NVVSW T++ G + G G + + E+T + +
Sbjct: 343 ITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAV 402
Query: 346 YACSH 350
C H
Sbjct: 403 PVCFH 407
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 115/264 (43%), Gaps = 17/264 (6%)
Query: 103 VFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTM----SCVEPDTHTYPFLLKAVS 158
+F ++ N+ +WN+MIR ++++ + + +M PD T +L +
Sbjct: 244 LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 303
Query: 159 KSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE-----------S 207
+ + G+ +H +K + + + N+L+ +Y+ CG +A +F+ +
Sbjct: 304 REREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNT 363
Query: 208 MTDRFALNGRPNEALTLFREMSANG--VEPDGFTVVSLLSACAELGALELGRRVHVYLLK 265
M F+ G + + R+M A G V+ D T+++ + C L + +H Y LK
Sbjct: 364 MVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLK 423
Query: 266 AGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXX 325
N V NA + YAKCGS+ AQ+VF + + V SW LI G A +
Sbjct: 424 QEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDA 483
Query: 326 XXXXXXQKLAPGEITFVGVLYACS 349
L P T +L ACS
Sbjct: 484 HLQMKISGLLPDSFTVCSLLSACS 507
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 407 bits (1045), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/575 (37%), Positives = 334/575 (58%), Gaps = 17/575 (2%)
Query: 50 ISLLQYC--ASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMI 107
+SLL C A ++ IH++SI+HG L + + + + + + VF +
Sbjct: 251 VSLLSACTEAGDFNRGVTIHSYSIKHG--LESELFVSNKLIDLYAEFGRLRDCQKVFDRM 308
Query: 108 RNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGE 167
++ +WN++I+ Y ++ P A+ +++M +S ++PD T L +S+ ++R
Sbjct: 309 YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACR 368
Query: 168 ALHSVTIKNG-FESLVFVRNSLLHIYAACGDTESAHKVFE-----------SMTDRFALN 215
++ T++ G F + + N+++ +YA G +SA VF ++ +A N
Sbjct: 369 SVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQN 428
Query: 216 GRPNEALTLFREMSANG-VEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
G +EA+ ++ M G + + T VS+L AC++ GAL G ++H LLK GL ++ V
Sbjct: 429 GFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFV 488
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKL 334
V +L D+Y KCG + +A +F ++ N V W TLI +G G + +
Sbjct: 489 VTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGV 548
Query: 335 APGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAY 394
P ITFV +L ACSH G++DEG F M+ +YGI P ++HYGCMVD+ RAG ++ A
Sbjct: 549 KPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETAL 608
Query: 395 EYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASER 454
++I++M +QP+A IW LL AC +HG++ LG+IA HL ++EP+H G +VLLSN+YAS
Sbjct: 609 KFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAG 668
Query: 455 RWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXX 514
+W V IR G++KTPG+S +E+ N+V F G+++HP +++Y
Sbjct: 669 KWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLK 728
Query: 515 XXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHM 574
GYVP VL D+E++EKE L HSE++AIAF L+ T T IR+ KNLRVC DCH
Sbjct: 729 MIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHS 788
Query: 575 AIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
K ISK+ +REI++RD +RFHHF+ G CSC DYW
Sbjct: 789 VTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 156/347 (44%), Gaps = 36/347 (10%)
Query: 97 MSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALH-FYRQMTMSCVEPDTHTYPFLLK 155
++ A F I+N +V+ WN MI GY + + + F M S + PD T+P +LK
Sbjct: 102 VALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLK 161
Query: 156 AVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---- 211
A V +G +H + +K GF V+V SL+H+Y+ +A +F+ M R
Sbjct: 162 ACR---TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGS 218
Query: 212 -------FALNGRPNEALTLFREMSANGVEP-DGFTVVSLLSACAELGALELGRRVHVYL 263
+ +G EALTL +NG+ D TVVSLLSAC E G G +H Y
Sbjct: 219 WNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYS 273
Query: 264 LKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXX 323
+K GL L V N L+DLYA+ G +R+ Q+VF M R+++SW ++I +N
Sbjct: 274 IKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAI 333
Query: 324 XXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPR-------IEH 376
++ P +T + + S G + R + G R I
Sbjct: 334 SLFQEMRLSRIQPDCLTLISLASILSQLGDI-------RACRSVQGFTLRKGWFLEDITI 386
Query: 377 YGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLS 423
+V + ++ GLV A +P + + W T++ +G S
Sbjct: 387 GNAVVVMYAKLGLVDSARAVFNWLP-NTDVISWNTIISGYAQNGFAS 432
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/549 (38%), Positives = 317/549 (57%), Gaps = 18/549 (3%)
Query: 78 HNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQ 137
+P + LI L + + YA VF R ++ WN + R + + L Y +
Sbjct: 110 QDPFLATKLIGMYSDLGS-VDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWK 168
Query: 138 MTMSCVEPDTHTYPFLLKAVSKSL----NVREGEALHSVTIKNGFESLVFVRNSLLHIYA 193
M VE D TY ++LKA S ++ +G+ +H+ + G+ S V++ +L+ +YA
Sbjct: 169 MNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYA 228
Query: 194 ACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREM--SANGVEPDGFTV 240
G + A VF M R +A NG+ EAL FREM P+ T+
Sbjct: 229 RFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTM 288
Query: 241 VSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEE 300
VS+L ACA L ALE G+ +H Y+L+ GL L V++AL+ +Y +CG + Q+VF M +
Sbjct: 289 VSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHD 348
Query: 301 RNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDY 360
R+VVSW +LI V+G+G +P +TFV VL ACSH G+++EG
Sbjct: 349 RDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRL 408
Query: 361 FRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHG 420
F M ++GI P+IEHY CMVDLL RA + +A + +Q+M +P +W +LLG+C IHG
Sbjct: 409 FETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHG 468
Query: 421 HLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLV 480
++ L E A L LEPK++G+YVLL+++YA + W +V+ ++K + G++K PG +
Sbjct: 469 NVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWM 528
Query: 481 ELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLADIEEEEKEQALSY 540
E+ ++Y F D +P + ++A GY+P+T+ VL ++E EEKE+ +
Sbjct: 529 EVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLG 588
Query: 541 HSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDREIVIRDRSRFHHFRG 600
HSEK+A+AF L+NT+ G PIR+ KNLR+C DCH+ K ISK ++EI++RD +RFH F+
Sbjct: 589 HSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKN 648
Query: 601 GKCSCKDYW 609
G CSC DYW
Sbjct: 649 GVCSCGDYW 657
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 140/326 (42%), Gaps = 29/326 (8%)
Query: 116 NTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIK 175
N +I+ + K A+ Q + P TY L+ ++ + +H +
Sbjct: 50 NQLIQSLCKEGKLKQAIRVLSQES----SPSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 176 NGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTL 224
NG + F+ L+ +Y+ G + A KVF+ R L G E L L
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 225 FREMSANGVEPDGFTVVSLLSACA----ELGALELGRRVHVYLLKAGLRENLHVVNALLD 280
+ +M+ GVE D FT +L AC + L G+ +H +L + G +++++ L+D
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVD 225
Query: 281 LYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNG--FGXXXXXXXXXXXXQKLAPGE 338
+YA+ G + A VFG M RNVVSW+ +I A NG F + +P
Sbjct: 226 MYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNS 285
Query: 339 ITFVGVLYACSHCGMLDEG---FDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYE 395
+T V VL AC+ L++G Y R G+ + +V + R G ++
Sbjct: 286 VTMVSVLQACASLAALEQGKLIHGYILRR----GLDSILPVISALVTMYGRCGKLEVGQR 341
Query: 396 YIQNMPVQPNAVIWRTLLGACTIHGH 421
M + + V W +L+ + +HG+
Sbjct: 342 VFDRMHDR-DVVSWNSLISSYGVHGY 366
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 404 bits (1037), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/578 (35%), Positives = 323/578 (55%), Gaps = 16/578 (2%)
Query: 46 LTKCISLLQYCASSK--HKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLV 103
L +S+ CA S+ + +H+ ++ D + + + S + A V
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHSIGVK--ACFSREDRFCNTLLDMYSKCGDLDSAKAV 353
Query: 104 FTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNV 163
F + + +V ++ +MI GYA A+ + +M + PD +T +L ++ +
Sbjct: 354 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLL 413
Query: 164 REGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------F 212
EG+ +H +N +FV N+L+ +YA CG + A VF M + +
Sbjct: 414 DEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGY 473
Query: 213 ALNGRPNEALTLFREM-SANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLREN 271
+ N NEAL+LF + PD TV +L ACA L A + GR +H Y+++ G +
Sbjct: 474 SKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSD 533
Query: 272 LHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXX 331
HV N+L+D+YAKCG++ A +F ++ +++VSWT +I G ++GFG
Sbjct: 534 RHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQ 593
Query: 332 QKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVK 391
+ EI+FV +LYACSH G++DEG+ +F M+ E I P +EHY C+VD+L+R G +
Sbjct: 594 AGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLI 653
Query: 392 QAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYA 451
+AY +I+NMP+ P+A IW LL C IH + L E + +LEP+++G YVL++N+YA
Sbjct: 654 KAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYA 713
Query: 452 SERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXX 511
+W V+ +RK + Q G++K PG S +E+ RV F GD S+P+++++ A
Sbjct: 714 EAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRA 773
Query: 512 XXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCAD 571
GY P T+ L D EE EKE+AL HSEK+A+A ++++ G IRV KNLRVC D
Sbjct: 774 RMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGD 833
Query: 572 CHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
CH K +SK+ REIV+RD +RFH F+ G CSC+ +W
Sbjct: 834 CHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 190/391 (48%), Gaps = 21/391 (5%)
Query: 51 SLLQYCASSK--HKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIR 108
S+LQ CA SK K++ F IR + + ++G L + + A VF ++
Sbjct: 99 SVLQLCADSKSLKDGKEVDNF-IRGNGFVIDSNLGSKLSLMYTN-CGDLKEASRVFDEVK 156
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
WN ++ A+S D ++ +++M S VE D++T+ + K+ S +V GE
Sbjct: 157 IEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQ 216
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGR 217
LH +K+GF V NSL+ Y +SA KVF+ MT+R + NG
Sbjct: 217 LHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGL 276
Query: 218 PNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNA 277
+ L++F +M +G+E D T+VS+ + CA+ + LGR VH +KA N
Sbjct: 277 AEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNT 336
Query: 278 LLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPG 337
LLD+Y+KCG + A+ VF EM +R+VVS+T++I G A G + ++P
Sbjct: 337 LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPD 396
Query: 338 EITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYI 397
T VL C+ +LDEG +KE + I ++D+ ++ G +++A
Sbjct: 397 VYTVTAVLNCCARYRLLDEGKRVHEWIKEN-DLGFDIFVSNALMDMYAKCGSMQEAELVF 455
Query: 398 QNMPVQPNAVIWRTLLGA----CTIHGHLSL 424
M V+ + + W T++G C + LSL
Sbjct: 456 SEMRVK-DIISWNTIIGGYSKNCYANEALSL 485
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 166/405 (40%), Gaps = 63/405 (15%)
Query: 71 IRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKP 130
IR GV + K++IF SL + T R+ V NT +R + ES + +
Sbjct: 27 IRSGVRVR-----KYVIFNRASLRTVSDCVDSITTFDRS--VTDANTQLRRFCESGNLEN 79
Query: 131 ALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLH 190
A+ ++P T L A SKSL ++G+ + + NGF + + L
Sbjct: 80 AVKLLCVSGKWDIDPRTLCSVLQLCADSKSL--KDGKEVDNFIRGNGFVIDSNLGSKLSL 137
Query: 191 IYAACGDTESAHKVFES-----------MTDRFALNGRPNEALTLFREMSANGVEPDGFT 239
+Y CGD + A +VF+ + + A +G + ++ LF++M ++GVE D +T
Sbjct: 138 MYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYT 197
Query: 240 VVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEME 299
+ + + L ++ G ++H ++LK+G E V N+L+ Y K + A++VF EM
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257
Query: 300 ERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYAC----------- 348
ER+V+SW ++I G NG + T V V C
Sbjct: 258 ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRA 317
Query: 349 ------------------------SHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLL 384
S CG LD FR M + ++ Y M+
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVS-----YTSMIAGY 372
Query: 385 SRAGLVKQA---YEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGE 426
+R GL +A +E ++ + P+ +L C + L G+
Sbjct: 373 AREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGK 417
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/584 (36%), Positives = 329/584 (56%), Gaps = 27/584 (4%)
Query: 42 LPHVLTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAP---MS 98
PH+L C L S + +HA R G D + +++L A +
Sbjct: 122 FPHLLKACSGL-----SHLQMGRFVHAQVFRLGF-----DADVFVQNGLIALYAKCRRLG 171
Query: 99 YAHLVFTMIRNP--NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKA 156
A VF + P + +W ++ YA++ +P AL + QM V+PD +L A
Sbjct: 172 SARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNA 231
Query: 157 VSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE---------- 206
+ ++++G ++H+ +K G E + SL +YA CG +A +F+
Sbjct: 232 FTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILW 291
Query: 207 -SMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLK 265
+M +A NG EA+ +F EM V PD ++ S +SACA++G+LE R ++ Y+ +
Sbjct: 292 NAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGR 351
Query: 266 AGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXX 325
+ R+++ + +AL+D++AKCGS+ A+ VF +R+VV W+ +IVG ++G
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISL 411
Query: 326 XXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLS 385
+ P ++TF+G+L AC+H GM+ EG+ +F RM + + I P+ +HY C++DLL
Sbjct: 412 YRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLG 470
Query: 386 RAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVL 445
RAG + QAYE I+ MPVQP +W LL AC H H+ LGE A L ++P ++G YV
Sbjct: 471 RAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQ 530
Query: 446 LSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAX 505
LSNLYA+ R W V +R M + G+ K G S VE+ R+ F +GD+SHP+ +++
Sbjct: 531 LSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQ 590
Query: 506 XXXXXXXXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKN 565
G+V + L D+ +EE E+ L HSE++AIA+ L++T GTP+R+ KN
Sbjct: 591 VEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKN 650
Query: 566 LRVCADCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
LR C +CH A KLISK+ DREIV+RD +RFHHF+ G CSC DYW
Sbjct: 651 LRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 192/383 (50%), Gaps = 29/383 (7%)
Query: 57 ASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAP---MSYAHLVFTMIRNPNVF 113
A+ K +LKQIHA + G+ LI ++ S+ +++A VF + P +F
Sbjct: 31 ATHKAQLKQIHARLLVLGLQFSG-----FLITKLIHASSSFGDITFARQVFDDLPRPQIF 85
Query: 114 TWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVT 173
WN +IRGY+ + + AL Y M ++ V PD+ T+P LLKA S +++ G +H+
Sbjct: 86 PWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQV 145
Query: 174 IKNGFESLVFVRNSLLHIYAACGDTESAHKVFE-------------SMTDRFALNGRPNE 220
+ GF++ VFV+N L+ +YA C SA VFE ++ +A NG P E
Sbjct: 146 FRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPME 205
Query: 221 ALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLD 280
AL +F +M V+PD +VS+L+A L L+ GR +H ++K GL ++ +L
Sbjct: 206 ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT 265
Query: 281 LYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEIT 340
+YAKCG + A+ +F +M+ N++ W +I G A NG+ + + P I+
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 325
Query: 341 FVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHY---GCMVDLLSRAGLVKQAYEYI 397
+ AC+ G L++ R M E G + + ++D+ ++ G V+ A +
Sbjct: 326 ITSAISACAQVGSLEQA----RSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGA-RLV 380
Query: 398 QNMPVQPNAVIWRTLLGACTIHG 420
+ + + V+W ++ +HG
Sbjct: 381 FDRTLDRDVVVWSAMIVGYGLHG 403
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 124/296 (41%), Gaps = 33/296 (11%)
Query: 148 HTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE- 206
H+ F + + + + + +H+ + G + F+ L+H ++ GD A +VF+
Sbjct: 19 HSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDD 78
Query: 207 ----------SMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELG 256
++ ++ N +AL ++ M V PD FT LL AC+ L L++G
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 257 RRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFG--EMEERNVVSWTTLIVGLA 314
R VH + + G ++ V N L+ LYAKC + A+ VF + ER +VSWT ++ A
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 315 VNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRI 374
NG + P + V VL A F + +K+ I +
Sbjct: 199 QNGEPMEALEIFSQMRKMDVKPDWVALVSVLNA----------FTCLQDLKQGRSIHASV 248
Query: 375 EHYGCMV--DLL-------SRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGH 421
G + DLL ++ G V A M PN ++W ++ +G+
Sbjct: 249 VKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAMISGYAKNGY 303
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 400 bits (1029), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/562 (38%), Positives = 315/562 (56%), Gaps = 16/562 (2%)
Query: 51 SLLQYCASSKHKLKQ--IHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIR 108
+LL+ C K ++ +HA I + H+ MG L+ + + + A VF +
Sbjct: 65 TLLKKCTVFKLLIQGRIVHA-HILQSIFRHDIVMGNTLL-NMYAKCGSLEEARKVFEKMP 122
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
+ TW T+I GY++ P AL F+ QM P+ T ++KA + G
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGR 217
LH +K GF+S V V ++LL +Y G + A VF+++ R A
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 218 PNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNA 277
+AL LF+ M +G P F+ SL AC+ G LE G+ VH Y++K+G + N
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302
Query: 278 LLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPG 337
LLD+YAK GSI +A+++F + +R+VVSW +L+ A +GFG + P
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362
Query: 338 EITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYI 397
EI+F+ VL ACSH G+LDEG+ Y+ MK++ GI P HY +VDLL RAG + +A +I
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFI 421
Query: 398 QNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWT 457
+ MP++P A IW+ LL AC +H + LG A H+ +L+P G +V+L N+YAS RW
Sbjct: 422 EEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWN 481
Query: 458 DVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXG 517
D +RK M + GVKK P S VE+ N ++ F D HPQ +++ G
Sbjct: 482 DAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELG 541
Query: 518 YVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIK 577
YVP T +V+ ++++E+E L YHSEK+A+AF LLNT PG+ I + KN+RVC DCH AIK
Sbjct: 542 YVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIK 601
Query: 578 LISKVYDREIVIRDRSRFHHFR 599
L SKV REI++RD +RFHHF+
Sbjct: 602 LASKVVGREIIVRDTNRFHHFK 623
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 135/291 (46%), Gaps = 13/291 (4%)
Query: 141 SCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTES 200
S + D Y LLK + + +G +H+ +++ F + + N+LL++YA CG E
Sbjct: 54 SYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEE 113
Query: 201 AHKVFESMTDR-----------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAE 249
A KVFE M R ++ + RP +AL F +M G P+ FT+ S++ A A
Sbjct: 114 ARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAA 173
Query: 250 LGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTL 309
G ++H + +K G N+HV +ALLDLY + G + +AQ VF +E RN VSW L
Sbjct: 174 ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 233
Query: 310 IVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYG 369
I G A P ++ + ACS G L++G + + G
Sbjct: 234 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG-KWVHAYMIKSG 292
Query: 370 IAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHG 420
++D+ +++G + A + + + + V W +LL A HG
Sbjct: 293 EKLVAFAGNTLLDMYAKSGSIHDARKIFDRL-AKRDVVSWNSLLTAYAQHG 342
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 400 bits (1028), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/560 (36%), Positives = 318/560 (56%), Gaps = 18/560 (3%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
+Q+HA S+ G + +G I S + ++F + + ++N +I Y+
Sbjct: 270 QQLHALSVTTGFS-RDASVGNQ-ILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYS 327
Query: 124 ESQDPKPALHFYRQMTMSCVEPDTHTYPF--LLKAVSKSLNVREGEALHSVTIKNGFESL 181
++ + +LHF+R+M C+ D +PF +L + +++ G LH + +S+
Sbjct: 328 QADQYEASLHFFREM--QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSI 385
Query: 182 VFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMSA 230
+ V NSL+ +YA C E A +F+S+ R + G L LF +M
Sbjct: 386 LHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRG 445
Query: 231 NGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIRE 290
+ + D T ++L A A +L LG+++H +++++G EN+ + L+D+YAKCGSI++
Sbjct: 446 SNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKD 505
Query: 291 AQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSH 350
A QVF EM +RN VSW LI A NG G L P ++ +GVL ACSH
Sbjct: 506 AVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSH 565
Query: 351 CGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWR 410
CG +++G +YF+ M YGI P+ +HY CM+DLL R G +A + + MP +P+ ++W
Sbjct: 566 CGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWS 625
Query: 411 TLLGACTIHGHLSLGEIARSHLLKLEP-KHSGDYVLLSNLYASERRWTDVQTIRKSMLQD 469
++L AC IH + SL E A L +E + + YV +SN+YA+ W V+ ++K+M +
Sbjct: 626 SVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRER 685
Query: 470 GVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLADI 529
G+KK P YS VE+ ++++ F+ D++HP ++ GY P T +V+ D+
Sbjct: 686 GIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDV 745
Query: 530 EEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDREIVI 589
+E+ K ++L YHSE++A+AF L++T G PI VMKNLR C DCH AIKLISK+ REI +
Sbjct: 746 DEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITV 805
Query: 590 RDRSRFHHFRGGKCSCKDYW 609
RD SRFHHF G CSC DYW
Sbjct: 806 RDTSRFHHFSEGVCSCGDYW 825
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 169/416 (40%), Gaps = 46/416 (11%)
Query: 94 SAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQM--TMSCVEPDTHTYP 151
+ +S A +F + + V TW ++ YA + A +RQM + SC PD T+
Sbjct: 92 TGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFT 151
Query: 152 FLLKAVSKSLNVREGEALHSVTIKNGFESLVF--VRNSLLHIYAACGDTESAHKVFESMT 209
LL + ++ +H+ +K GF++ F V N LL Y + A +FE +
Sbjct: 152 TLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP 211
Query: 210 DR-----------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRR 258
++ + +G E++ LF +M +G +P FT +L A L LG++
Sbjct: 212 EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQ 271
Query: 259 VHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGF 318
+H + G + V N +LD Y+K + E + +F EM E + VS+ +I +
Sbjct: 272 LHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQ 331
Query: 319 GXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRM--KEEYGIAPRIEH 376
F +L ++ L G R++ + A I H
Sbjct: 332 YEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMG----RQLHCQALLATADSILH 387
Query: 377 YG-CMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKL 435
G +VD+ ++ + ++A +++P Q V W L+ G G LKL
Sbjct: 388 VGNSLVDMYAKCEMFEEAELIFKSLP-QRTTVSWTALISGYVQKGLHGAG-------LKL 439
Query: 436 EPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTM 491
K G SNL A + + V +K + ++ + LG +++ F +
Sbjct: 440 FTKMRG-----SNLRADQSTFATV-----------LKASASFASLLLGKQLHAFII 479
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 396 bits (1018), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/545 (37%), Positives = 299/545 (54%), Gaps = 46/545 (8%)
Query: 111 NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALH 170
N+ +WN ++ G+ S K A+ ++++ PD T +L +V S + G +H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 171 SVTIKNGFESLVFVRNSLLHIYAACGDT-------------------------------E 199
IK G V ++++ +Y G +
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 200 SAHKVFE---------------SMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLL 244
A ++FE S+ A NG+ EAL LFREM GV+P+ T+ S+L
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 245 SACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVV 304
AC + AL GR H + ++ L +N+HV +AL+D+YAKCG I +Q VF M +N+V
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV 455
Query: 305 SWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRM 364
W +L+ G +++G +L P I+F +L AC G+ DEG+ YF+ M
Sbjct: 456 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Query: 365 KEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSL 424
EEYGI PR+EHY CMV+LL RAG +++AY+ I+ MP +P++ +W LL +C + ++ L
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 575
Query: 425 GEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGN 484
EIA L LEP++ G YVLLSN+YA++ WT+V +IR M G+KK PG S +++ N
Sbjct: 576 AEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKN 635
Query: 485 RVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLADIEEEEKEQALSYHSEK 544
RVY GD+SHPQ + G+ P + L D+EE+E+EQ L HSEK
Sbjct: 636 RVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEK 695
Query: 545 VAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCS 604
+A+ F LLNT GTP++V+KNLR+C DCH IK IS REI IRD +RFHHF+ G CS
Sbjct: 696 LAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICS 755
Query: 605 CKDYW 609
C D+W
Sbjct: 756 CGDFW 760
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 168/408 (41%), Gaps = 95/408 (23%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A LV I +P +++++++I +++ ++ + +M + PD+H P L K ++
Sbjct: 69 ADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAE 128
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-------- 211
+ G+ +H V+ +G + FV+ S+ H+Y CG A KVF+ M+D+
Sbjct: 129 LSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSAL 188
Query: 212 ---FALNGRPNEALTLFREMSANGVE---------------------------------- 234
+A G E + + EM ++G+E
Sbjct: 189 LCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGF 248
Query: 235 -PDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQ 293
PD TV S+L + + L +GR +H Y++K GL ++ V++A++D+Y K G +
Sbjct: 249 CPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIIS 308
Query: 294 VFGEME-----------------------------------ERNVVSWTTLIVGLAVNGF 318
+F + E E NVVSWT++I G A NG
Sbjct: 309 LFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGK 368
Query: 319 GXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIE--- 375
+ P +T +L AC + L G + +G A R+
Sbjct: 369 DIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHG-------RSTHGFAVRVHLLD 421
Query: 376 --HYG-CMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHG 420
H G ++D+ ++ G + + MP + N V W +L+ ++HG
Sbjct: 422 NVHVGSALIDMYAKCGRINLSQIVFNMMPTK-NLVCWNSLMNGFSMHG 468
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/330 (19%), Positives = 125/330 (37%), Gaps = 79/330 (23%)
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------FALNGRP-- 218
H+ +K+G ++ ++ L+ Y+ A V +S+ D +AL
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 219 NEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNAL 278
+++ +F M ++G+ PD + +L CAEL A ++G+++H +GL + V ++
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 279 LDLYAKCGSIREAQQVFGEMEER-----------------------------------NV 303
+Y +CG + +A++VF M ++ N+
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI 217
Query: 304 VSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEG------ 357
VSW ++ G +G+ P ++T VL + ML+ G
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGY 277
Query: 358 ----------------FDYFRRMKEEYGIAPRIEHYGCM--------VDLLSRAGLVKQA 393
D + + YGI + M + LSR GLV +A
Sbjct: 278 VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKA 337
Query: 394 ---YEYIQNMPVQPNAVIWRTLLGACTIHG 420
+E + ++ N V W +++ C +G
Sbjct: 338 LEMFELFKEQTMELNVVSWTSIIAGCAQNG 367
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/563 (36%), Positives = 323/563 (57%), Gaps = 18/563 (3%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
KQ+H+++IR G+ + + + ++ S + VF + + +V +W +I GY
Sbjct: 289 KQLHSWAIRSGL-VDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYM 347
Query: 124 ESQD-PKPALHFYRQM-TMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESL 181
++ + A++ + +M T VEP+ T+ KA + R G+ + K G S
Sbjct: 348 KNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASN 407
Query: 182 VFVRNSLLHIYAACGDTESAHKVFESMTDRFAL-----------NGRPNEALTLFREMSA 230
V NS++ ++ E A + FES++++ + N +A L E++
Sbjct: 408 SSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE 467
Query: 231 NGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIRE 290
+ FT SLLS A +G++ G ++H ++K GL N V NAL+ +Y+KCGSI
Sbjct: 468 RELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDT 527
Query: 291 AQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSH 350
A +VF ME RNV+SWT++I G A +GF + + P E+T+V +L ACSH
Sbjct: 528 ASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSH 587
Query: 351 CGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWR 410
G++ EG+ +F M E++ I P++EHY CMVDLL RAGL+ A+E+I MP Q + ++WR
Sbjct: 588 VGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWR 647
Query: 411 TLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDG 470
T LGAC +H + LG++A +L+L+P Y+ LSN+YA +W + +R+ M +
Sbjct: 648 TFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERN 707
Query: 471 VKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLADI- 529
+ K G S +E+G+++++F +GD +HP + +Y GYVP T+ VL +
Sbjct: 708 LVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLE 767
Query: 530 ---EEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDRE 586
+E EKE+ L HSEK+A+AF L++T+ P+RV KNLRVC DCH A+K IS V RE
Sbjct: 768 EENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGRE 827
Query: 587 IVIRDRSRFHHFRGGKCSCKDYW 609
IV+RD +RFHHF+ GKCSC DYW
Sbjct: 828 IVLRDLNRFHHFKDGKCSCNDYW 850
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 151/291 (51%), Gaps = 33/291 (11%)
Query: 51 SLLQYCASSKH-KL-KQIHA----FSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVF 104
SLL+ C ++ +L K +HA F I L+N + ++ S S + A VF
Sbjct: 67 SLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNS------LISLYSKSGDSAKAEDVF 120
Query: 105 TMIR---NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSL 161
+R +V +W+ M+ Y + A+ + + + P+ + Y +++A S S
Sbjct: 121 ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSD 180
Query: 162 NVREGEALHSVTIKNG-FESLVFVRNSLLHIYAACGDT-ESAHKVFESMTD--------- 210
V G +K G FES V V SL+ ++ ++ E+A+KVF+ M++
Sbjct: 181 FVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLM 240
Query: 211 --RFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGL 268
R G P EA+ F +M +G E D FT+ S+ SACAEL L LG+++H + +++GL
Sbjct: 241 ITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL 300
Query: 269 RENLHVVNALLDLYAKC---GSIREAQQVFGEMEERNVVSWTTLIVGLAVN 316
+++ +L+D+YAKC GS+ + ++VF ME+ +V+SWT LI G N
Sbjct: 301 VDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 19/260 (7%)
Query: 116 NTMIRGYAESQDPKPALHFYRQMTMSCVEP-DTHTYPFLLKAVSKSLNVREGEALHSVTI 174
+ +I + + D + A+ M + P D+ T+ LLK+ ++ + R G+ +H+ I
Sbjct: 30 DRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLI 89
Query: 175 KNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFAL---------------NGRPN 219
+ E + NSL+ +Y+ GD+ A VFE+M RF NGR
Sbjct: 90 EFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMR-RFGKRDVVSWSAMMACYGNNGREL 148
Query: 220 EALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAG-LRENLHVVNAL 278
+A+ +F E G+ P+ + +++ AC+ + +GR +L+K G ++ V +L
Sbjct: 149 DAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSL 208
Query: 279 LDLYAKC-GSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPG 337
+D++ K S A +VF +M E NVV+WT +I GF
Sbjct: 209 IDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESD 268
Query: 338 EITFVGVLYACSHCGMLDEG 357
+ T V AC+ L G
Sbjct: 269 KFTLSSVFSACAELENLSLG 288
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 97/230 (42%), Gaps = 24/230 (10%)
Query: 207 SMTDRFALN----GRPNEALTLFREMSANGVEP-DGFTVVSLLSACAELGALELGRRVHV 261
++ DR L G A++ M+ +G+ P D T SLL +C LG+ VH
Sbjct: 27 NVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHA 86
Query: 262 YLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEME---ERNVVSWTTLIVGLAVNGF 318
L++ + + + N+L+ LY+K G +A+ VF M +R+VVSW+ ++ NG
Sbjct: 87 RLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGR 146
Query: 319 GXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHY- 377
L P + + V+ ACS+ + G + G + H+
Sbjct: 147 ELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVG-------RVTLGFLMKTGHFE 199
Query: 378 -----GC-MVDLLSRA-GLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHG 420
GC ++D+ + + AY+ M + N V W ++ C G
Sbjct: 200 SDVCVGCSLIDMFVKGENSFENAYKVFDKMS-ELNVVTWTLMITRCMQMG 248
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 395 bits (1015), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/558 (37%), Positives = 311/558 (55%), Gaps = 14/558 (2%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
K I+ + ++ G L + ++++ + + M A VF + + +WN++I GY
Sbjct: 327 KYIYNYMLKAGFVLEST--VRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYI 384
Query: 124 ESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVF 183
+S D A+ ++ M + + D TY L+ ++ +++ G+ LHS IK+G +
Sbjct: 385 QSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLS 444
Query: 184 VRNSLLHIYAACGDTESAHKVFESMT--DRFALN---------GRPNEALTLFREMSANG 232
V N+L+ +YA CG+ + K+F SM D N G L + +M +
Sbjct: 445 VSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSE 504
Query: 233 VEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQ 292
V PD T + L CA L A LG+ +H LL+ G L + NAL+++Y+KCG + +
Sbjct: 505 VVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSS 564
Query: 293 QVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCG 352
+VF M R+VV+WT +I + G G + P + F+ ++YACSH G
Sbjct: 565 RVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSG 624
Query: 353 MLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTL 412
++DEG F +MK Y I P IEHY C+VDLLSR+ + +A E+IQ MP++P+A IW ++
Sbjct: 625 LVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASV 684
Query: 413 LGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVK 472
L AC G + E +++L P G +L SN YA+ R+W V IRKS+ +
Sbjct: 685 LRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHIT 744
Query: 473 KTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLADI-EE 531
K PGYS +E+G V+ F+ GD S PQS+ +Y GY+P V ++ EE
Sbjct: 745 KNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEE 804
Query: 532 EEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDREIVIRD 591
EEK + + HSE++AIAF LLNT PGTP++VMKNLRVC DCH KLISK+ REI++RD
Sbjct: 805 EEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRD 864
Query: 592 RSRFHHFRGGKCSCKDYW 609
+RFH F+ G CSCKD W
Sbjct: 865 ANRFHLFKDGTCSCKDRW 882
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 207/431 (48%), Gaps = 26/431 (6%)
Query: 57 ASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWN 116
+S+ ++L++IHA I G+ + GK LI P S + + NV+ WN
Sbjct: 17 SSNLNELRRIHALVISLGLDSSDFFSGK-LIDKYSHFREPASSLSVFRRVSPAKNVYLWN 75
Query: 117 TMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKN 176
++IR ++++ AL FY ++ S V PD +T+P ++KA + + G+ ++ +
Sbjct: 76 SIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDM 135
Query: 177 GFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLF 225
GFES +FV N+L+ +Y+ G A +VF+ M R ++ +G EAL ++
Sbjct: 136 GFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIY 195
Query: 226 REMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKC 285
E+ + + PD FTV S+L A L ++ G+ +H + LK+G+ + V N L+ +Y K
Sbjct: 196 HELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKF 255
Query: 286 GSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVL 345
+A++VF EM+ R+ VS+ T+I G Q P +T VL
Sbjct: 256 RRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVL 314
Query: 346 YACSHCGMLD-EGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQP 404
AC H L + Y +K + + + + ++D+ ++ G + A + +M +
Sbjct: 315 RACGHLRDLSLAKYIYNYMLKAGFVLESTVRN--ILIDVYAKCGDMITARDVFNSMECK- 371
Query: 405 NAVIWRTLLGACTIHGHLSLGEIARS-HLLKLE--PKHSGDYVLLSNLYASERRWTDVQT 461
+ V W ++ I G++ G++ + L K+ + D++ L + R D++
Sbjct: 372 DTVSWNSI-----ISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLK- 425
Query: 462 IRKSMLQDGVK 472
K + +G+K
Sbjct: 426 FGKGLHSNGIK 436
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 163/351 (46%), Gaps = 14/351 (3%)
Query: 97 MSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKA 156
++ A VF + ++ +WN++I GY+ + AL Y ++ S + PD+ T +L A
Sbjct: 157 LTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPA 216
Query: 157 VSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNG 216
L V++G+ LH +K+G S+V V N L+ +Y A +VF+ M R +++
Sbjct: 217 FGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSY 276
Query: 217 RP-----------NEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLK 265
E++ +F E + + +PD TV S+L AC L L L + ++ Y+LK
Sbjct: 277 NTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLK 335
Query: 266 AGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXX 325
AG V N L+D+YAKCG + A+ VF ME ++ VSW ++I G +G
Sbjct: 336 AGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKL 395
Query: 326 XXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLS 385
+ IT++ ++ + L G + GI + ++D+ +
Sbjct: 396 FKMMMIMEEQADHITYLMLISVSTRLADLKFG-KGLHSNGIKSGICIDLSVSNALIDMYA 454
Query: 386 RAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLE 436
+ G V + + +M + V W T++ AC G + G + + K E
Sbjct: 455 KCGEVGDSLKIFSSMGTG-DTVTWNTVISACVRFGDFATGLQVTTQMRKSE 504
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 108/219 (49%), Gaps = 12/219 (5%)
Query: 151 PFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE---- 206
PF+ +A+S S N+ E +H++ I G +S F L+ Y+ + S+ VF
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 207 --------SMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRR 258
S+ F+ NG EAL + ++ + V PD +T S++ ACA L E+G
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 259 VHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGF 318
V+ +L G +L V NAL+D+Y++ G + A+QVF EM R++VSW +LI G + +G+
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 319 GXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEG 357
+ P T VL A + ++ +G
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 395 bits (1015), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/574 (36%), Positives = 319/574 (55%), Gaps = 20/574 (3%)
Query: 51 SLLQYCASSKHK--LKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIR 108
S+++ CA+ K +Q+H +++G L + ++ L+ +A + L +
Sbjct: 300 SVIKLCANLKELRFTEQLHCSVVKYGF-LFDQNIRTALMVAYSKCTAMLDALRLFKEIGC 358
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
NV +W MI G+ ++ + A+ + +M V P+ TY +L A L V
Sbjct: 359 VGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA----LPVISPSE 414
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGR 217
+H+ +K +E V +LL Y G E A KVF + D+ +A G
Sbjct: 415 VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGE 474
Query: 218 PNEALTLFREMSANGVEPDGFTVVSLLSACAELGA-LELGRRVHVYLLKAGLRENLHVVN 276
A+ +F E++ G++P+ FT S+L+ CA A + G++ H + +K+ L +L V +
Sbjct: 475 TEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSS 534
Query: 277 ALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAP 336
ALL +YAK G+I A++VF E+++VSW ++I G A +G +K+
Sbjct: 535 ALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKM 594
Query: 337 GEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEY 396
+TF+GV AC+H G+++EG YF M + IAP EH CMVDL SRAG +++A +
Sbjct: 595 DGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKV 654
Query: 397 IQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRW 456
I+NMP + IWRT+L AC +H LG +A ++ ++P+ S YVLLSN+YA W
Sbjct: 655 IENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDW 714
Query: 457 TDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXX 516
+ +RK M + VKK PGYS +E+ N+ Y F GDRSHP +Y
Sbjct: 715 QERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDL 774
Query: 517 GYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAI 576
GY P T VL DI++E KE L+ HSE++AIAF L+ T G+P+ ++KNLRVC DCH+ I
Sbjct: 775 GYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVI 834
Query: 577 KLISKVYDREIVIRDRSRFHHFRG-GKCSCKDYW 609
KLI+K+ +REIV+RD +RFHHF G CSC D+W
Sbjct: 835 KLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 138/296 (46%), Gaps = 14/296 (4%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
+Q+H I+ G L + +G L+ T + + VF ++ NV TW T+I GYA
Sbjct: 113 RQLHCQCIKFGF-LDDVSVGTSLVDTYMK-GSNFKDGRKVFDEMKERNVVTWTTLISGYA 170
Query: 124 ESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVF 183
+ L + +M +P++ T+ L +++ G +H+V +KNG + +
Sbjct: 171 RNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIP 230
Query: 184 VRNSLLHIYAACGDTESAHKVFE-----------SMTDRFALNGRPNEALTLFREMSANG 232
V NSL+++Y CG+ A +F+ SM +A NG EAL +F M N
Sbjct: 231 VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNY 290
Query: 233 VEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQ 292
V + S++ CA L L ++H ++K G + ++ AL+ Y+KC ++ +A
Sbjct: 291 VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDAL 350
Query: 293 QVFGEME-ERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYA 347
++F E+ NVVSWT +I G N + + P E T+ +L A
Sbjct: 351 RLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 163/373 (43%), Gaps = 46/373 (12%)
Query: 88 FTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDT 147
F VS S+ + AH +F + ++ +++ G++ + A + + +E D
Sbjct: 35 FGTVS-SSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDC 93
Query: 148 HTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFES 207
+ +LK + + G LH IK GF V V SL+ Y + + KVF+
Sbjct: 94 SIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDE 153
Query: 208 MTDR-----------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELG 256
M +R +A N +E LTLF M G +P+ FT + L AE G G
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 257 RRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVN 316
+VH ++K GL + + V N+L++LY KCG++R+A+ +F + E ++VV+W ++I G A N
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 317 GFGXXXXXXXXXXXXQKLAPGEITFVGVLYACS-----------HCGMLDEGFDYFRRMK 365
G + E +F V+ C+ HC ++ GF + + ++
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 366 EEYGIAPR-----------IEHYGCMVDLLSRAGLV---------KQAYEYIQNMP---V 402
+A + GC+ +++S ++ ++A + M V
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV 393
Query: 403 QPNAVIWRTLLGA 415
+PN + +L A
Sbjct: 394 RPNEFTYSVILTA 406
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 394 bits (1013), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/560 (37%), Positives = 314/560 (56%), Gaps = 14/560 (2%)
Query: 62 KLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRG 121
K + +H + G+ +N +G L+ ++ MS + V + +V WN +I G
Sbjct: 380 KGRILHGLVVVSGL-FYNQIIGNALV-SMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 437
Query: 122 YAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVRE-GEALHSVTIKNGFES 180
YAE +DP AL ++ M + V + T +L A ++ E G+ LH+ + GFES
Sbjct: 438 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 497
Query: 181 LVFVRNSLLHIYAACGDTESAHKVFESMTDR--------FALN---GRPNEALTLFREMS 229
V+NSL+ +YA CGD S+ +F + +R A N G E L L +M
Sbjct: 498 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 557
Query: 230 ANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIR 289
+ GV D F+ LSA A+L LE G+++H +K G + + NA D+Y+KCG I
Sbjct: 558 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG 617
Query: 290 EAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACS 349
E ++ R++ SW LI L +G+ + PG +TFV +L ACS
Sbjct: 618 EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS 677
Query: 350 HCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIW 409
H G++D+G Y+ + ++G+ P IEH C++DLL R+G + +A +I MP++PN ++W
Sbjct: 678 HGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVW 737
Query: 410 RTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQD 469
R+LL +C IHG+L G A +L KLEP+ YVL SN++A+ RW DV+ +RK M
Sbjct: 738 RSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFK 797
Query: 470 GVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLADI 529
+KK S V+L ++V F +GDR+HPQ+ ++YA GYV T L D
Sbjct: 798 NIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDT 857
Query: 530 EEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDREIVI 589
+EE+KE L HSE++A+A+ L++T G+ +R+ KNLR+C+DCH K +S+V R IV+
Sbjct: 858 DEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVL 917
Query: 590 RDRSRFHHFRGGKCSCKDYW 609
RD+ RFHHF G CSCKDYW
Sbjct: 918 RDQYRFHHFERGLCSCKDYW 937
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 173/394 (43%), Gaps = 19/394 (4%)
Query: 39 ENPLPHVLTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMS 98
EN + V++ C LL+ + + + Q+ + + + N + +++ +
Sbjct: 160 ENSMSLVISSC-GLLKDESLGRQIIGQVVKSGLESKLAVENS------LISMLGSMGNVD 212
Query: 99 YAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVS 158
YA+ +F + + +WN++ YA++ + + + M E ++ T LL +
Sbjct: 213 YANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLG 272
Query: 159 KSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR------- 211
+ + G +H + +K GF+S+V V N+LL +YA G + A+ VF+ M +
Sbjct: 273 HVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNS 332
Query: 212 ----FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAG 267
F +GR +AL L M ++G + T S L+AC E GR +H ++ +G
Sbjct: 333 LMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSG 392
Query: 268 LRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXX 327
L N + NAL+ +Y K G + E+++V +M R+VV+W LI G A +
Sbjct: 393 LFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQ 452
Query: 328 XXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRA 387
+ ++ IT V VL AC G L E G ++ + ++
Sbjct: 453 TMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKC 512
Query: 388 GLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGH 421
G + + + + N + W +L A HGH
Sbjct: 513 GDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGH 545
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 115/230 (50%), Gaps = 12/230 (5%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A +F ++ N +WNTM+ G + F+R+M ++P + L+ A +
Sbjct: 11 ARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGR 70
Query: 160 SLNV-REGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR------- 211
S ++ REG +H K+G S V+V ++LH+Y G + KVFE M DR
Sbjct: 71 SGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTS 130
Query: 212 ----FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAG 267
++ G P E + +++ M GV + ++ ++S+C L LGR++ ++K+G
Sbjct: 131 LMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSG 190
Query: 268 LRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNG 317
L L V N+L+ + G++ A +F +M ER+ +SW ++ A NG
Sbjct: 191 LESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 165/385 (42%), Gaps = 30/385 (7%)
Query: 51 SLLQYCASSKHKLK---QIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMI 107
SL+ C S + Q+H F + G L + I + + +S + VF +
Sbjct: 63 SLVTACGRSGSMFREGVQVHGFVAKSG--LLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 108 RNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGE 167
+ NV +W +++ GY++ +P+ + Y+ M V + ++ ++ + + G
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 168 ALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNG 216
+ +K+G ES + V NSL+ + + G+ + A+ +F+ M++R +A NG
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 217 RPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVN 276
E+ +F M E + TV +LLS + + GR +H ++K G + V N
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCN 300
Query: 277 ALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAP 336
LL +YA G EA VF +M ++++SW +L+ +G +
Sbjct: 301 TLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV 360
Query: 337 GEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHY------GCMVDLLSRAGLV 390
+TF L AC D+F + + +G+ + +V + + G +
Sbjct: 361 NYVTFTSALAACFTP-------DFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEM 413
Query: 391 KQAYEYIQNMPVQPNAVIWRTLLGA 415
++ + MP + + V W L+G
Sbjct: 414 SESRRVLLQMP-RRDVVAWNALIGG 437
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/524 (39%), Positives = 292/524 (55%), Gaps = 27/524 (5%)
Query: 111 NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALH 170
+V TW+ I GYA+ AL RQM S ++P+ T +L + + G+ +H
Sbjct: 329 DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH 388
Query: 171 SVTIK-------NGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR------------ 211
IK NG V N L+ +YA C ++A +F+S++ +
Sbjct: 389 CYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIG 448
Query: 212 -FALNGRPNEALTLFREMSANGVE--PDGFTVVSLLSACAELGALELGRRVHVYLLKAGL 268
++ +G N+AL L EM + P+ FT+ L ACA L AL +G+++H Y L+
Sbjct: 449 GYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN-- 506
Query: 269 REN---LHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXX 325
++N L V N L+D+YAKCGSI +A+ VF M +N V+WT+L+ G ++G+G
Sbjct: 507 QQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGI 566
Query: 326 XXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLS 385
+T + VLYACSH GM+D+G +YF RMK +G++P EHY C+VDLL
Sbjct: 567 FDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLG 626
Query: 386 RAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVL 445
RAG + A I+ MP++P V+W L C IHG + LGE A + +L H G Y L
Sbjct: 627 RAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTL 686
Query: 446 LSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAX 505
LSNLYA+ RW DV IR M GVKK PG S VE F +GD++HP ++++Y
Sbjct: 687 LSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQV 746
Query: 506 XXXXXXXXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKN 565
GYVP T L D+++EEK+ L HSEK+A+A+ +L T G IR+ KN
Sbjct: 747 LLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKN 806
Query: 566 LRVCADCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
LRVC DCH A +S++ D +I++RD SRFHHF+ G CSCK YW
Sbjct: 807 LRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 195/437 (44%), Gaps = 73/437 (16%)
Query: 43 PHVLTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHL 102
P + KC ++ Q +K IH + G+ N + HLI T +S+ +H
Sbjct: 32 PPFIHKCKTISQ--------VKLIHQKLLSFGILTLN--LTSHLISTYISVGC---LSHA 78
Query: 103 VFTMIRNP----NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVS 158
V + R P V+ WN++IR Y ++ L+ + M PD +T+PF+ KA
Sbjct: 79 VSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACG 138
Query: 159 KSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMT--------- 209
+ +VR GE+ H++++ GF S VFV N+L+ +Y+ C A KVF+ M+
Sbjct: 139 EISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNS 198
Query: 210 --DRFALNGRPNEALTLFREMSAN-GVEPDGFTVVSLLSACAELGALELGRRVHVYLLKA 266
+ +A G+P AL +F M+ G PD T+V++L CA LG LG+++H + + +
Sbjct: 199 IIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTS 258
Query: 267 GLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTL----------------- 309
+ +N+ V N L+D+YAKCG + EA VF M ++VVSW +
Sbjct: 259 EMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLF 318
Query: 310 ------------------IVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHC 351
I G A G G + P E+T + VL C+
Sbjct: 319 EKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASV 378
Query: 352 GMLDEGFDYFRRMKEEYGIAPRIEHYG-------CMVDLLSRAGLVKQAYEYIQNM-PVQ 403
G L G + +Y I R +G ++D+ ++ V A ++ P +
Sbjct: 379 GALMHGKE-IHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKE 437
Query: 404 PNAVIWRTLLGACTIHG 420
+ V W ++G + HG
Sbjct: 438 RDVVTWTVMIGGYSQHG 454
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 101/258 (39%), Gaps = 37/258 (14%)
Query: 64 KQIHAFSIRH---GVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIR 120
KQIHA+++R+ VPL + + + + +S A LVF + N TW +++
Sbjct: 497 KQIHAYALRNQQNAVPL----FVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMT 552
Query: 121 GYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFES 180
GY + AL + +M + D T +L A S HS I G E
Sbjct: 553 GYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACS-----------HSGMIDQGMEY 601
Query: 181 LVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMSANGVEPDGFTV 240
N + ++ E + + D GR N AL L EM +EP
Sbjct: 602 F----NRMKTVFGVSPGPEH----YACLVDLLGRAGRLNAALRLIEEMP---MEPPPVVW 650
Query: 241 VSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALL-DLYAKCGSIREAQQVFGEME 299
V+ LS C G +ELG + + L N LL +LYA G ++ ++ M
Sbjct: 651 VAFLSCCRIHGKVELGEYAAEKITE--LASNHDGSYTLLSNLYANAGRWKDVTRIRSLMR 708
Query: 300 ERNV-----VSWTTLIVG 312
+ V SW I G
Sbjct: 709 HKGVKKRPGCSWVEGIKG 726
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/559 (37%), Positives = 315/559 (56%), Gaps = 46/559 (8%)
Query: 97 MSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTM-SCVEPDTHTYPFLLK 155
M A F + ++ TWN+MI G+ + AL + +M S + PD T +L
Sbjct: 228 MDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLS 287
Query: 156 AVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHK------------ 203
A + + G+ +HS + GF+ V N+L+ +Y+ CG E+A +
Sbjct: 288 ACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKI 347
Query: 204 ---------------------VFESMTDR-----------FALNGRPNEALTLFREMSAN 231
+F S+ DR + +G EA+ LFR M
Sbjct: 348 EGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGG 407
Query: 232 GVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREA 291
G P+ +T+ ++LS + L +L G+++H +K+G ++ V NAL+ +YAK G+I A
Sbjct: 408 GQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSA 467
Query: 292 QQVFGEME-ERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSH 350
+ F + ER+ VSWT++I+ LA +G + L P IT+VGV AC+H
Sbjct: 468 SRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTH 527
Query: 351 CGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWR 410
G++++G YF MK+ I P + HY CMVDL RAGL+++A E+I+ MP++P+ V W
Sbjct: 528 AGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWG 587
Query: 411 TLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDG 470
+LL AC +H ++ LG++A LL LEP++SG Y L+NLY++ +W + IRKSM
Sbjct: 588 SLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGR 647
Query: 471 VKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLADIE 530
VKK G+S +E+ ++V+ F + D +HP+ ++Y GYVP T +VL D+E
Sbjct: 648 VKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLE 707
Query: 531 EEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDREIVIR 590
EE KEQ L +HSEK+AIAF L++T T +R+MKNLRVC DCH AIK ISK+ REI++R
Sbjct: 708 EEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVR 767
Query: 591 DRSRFHHFRGGKCSCKDYW 609
D +RFHHF+ G CSC+DYW
Sbjct: 768 DTTRFHHFKDGFCSCRDYW 786
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/458 (22%), Positives = 176/458 (38%), Gaps = 92/458 (20%)
Query: 66 IHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAES 125
+HA + +PL + + + S M F + + +W TMI GY
Sbjct: 66 LHARKLFDEMPLRTA-FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNI 124
Query: 126 QDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVR 185
A+ M +EP T +L +V+ + + G+ +HS +K G V V
Sbjct: 125 GQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVS 184
Query: 186 NSLLHIYAACGDTESAHKVFESMTDR---------------------------------- 211
NSLL++YA CGD A VF+ M R
Sbjct: 185 NSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIV 244
Query: 212 --------FALNGRPNEALTLFREMSANGV-EPDGFTVVSLLSACAELGALELGRRVHVY 262
F G AL +F +M + + PD FT+ S+LSACA L L +G+++H +
Sbjct: 245 TWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSH 304
Query: 263 LLKAGLRENLHVVNALLDLYAKCGSIR--------------------------------- 289
++ G + V+NAL+ +Y++CG +
Sbjct: 305 IVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMN 364
Query: 290 EAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACS 349
+A+ +F +++R+VV+WT +IVG +G P T +L S
Sbjct: 365 QAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVAS 424
Query: 350 HCGMLDEGFDYFRRMKEEYGIAPR------IEHYGCMVDLLSRAGLVKQAYEYIQNMPVQ 403
L G K+ +G A + + ++ + ++AG + A + +
Sbjct: 425 SLASLSHG-------KQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCE 477
Query: 404 PNAVIWRTLLGACTIHGHLSLG-EIARSHLLK-LEPKH 439
+ V W +++ A HGH E+ + L++ L P H
Sbjct: 478 RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDH 515
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 155/375 (41%), Gaps = 90/375 (24%)
Query: 152 FLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR 211
L K+V+KS + +H IK+G V++ N+L+++Y+ G A K+F+ M R
Sbjct: 19 LLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLR 78
Query: 212 FALN------------------------------------------GRPNEALTLFREMS 229
A + G+ ++A+ + +M
Sbjct: 79 TAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMV 138
Query: 230 ANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIR 289
G+EP FT+ ++L++ A +E G++VH +++K GLR N+ V N+LL++YAKCG
Sbjct: 139 KEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPM 198
Query: 290 EAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACS 349
A+ VF M R++ SW +I L+
Sbjct: 199 MAKFVFDRMVVRDISSWNAMI---------------------------------ALHM-- 223
Query: 350 HCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNM----PVQPN 405
G +D F +M E I + M+ ++ G +A + M + P+
Sbjct: 224 QVGQMDLAMAQFEQMAER-----DIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPD 278
Query: 406 AVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKS 465
++L AC L +G+ SH++ SG ++L+ L + R V+T R+
Sbjct: 279 RFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISG--IVLNALISMYSRCGGVETARRL 336
Query: 466 MLQDGVK--KTPGYS 478
+ Q G K K G++
Sbjct: 337 IEQRGTKDLKIEGFT 351
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/522 (37%), Positives = 295/522 (56%), Gaps = 20/522 (3%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A L+F +R NV TW TMI GY ++ A + M E ++ +L +
Sbjct: 191 ARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP----EKTEVSWTSMLLGYTL 246
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-------- 211
S + + E V V N+++ + G+ A +VF+ M DR
Sbjct: 247 SGRIEDAEEFFEVMPMKP----VIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGM 302
Query: 212 ---FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGL 268
+ G EAL LF +M GV P +++S+LS CA L +L+ GR+VH +L++
Sbjct: 303 IKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQF 362
Query: 269 RENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXX 328
++++V + L+ +Y KCG + +A+ VF ++++ W ++I G A +G G
Sbjct: 363 DDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHE 422
Query: 329 XXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAG 388
P ++T + +L ACS+ G L+EG + F M+ ++ + P +EHY C VD+L RAG
Sbjct: 423 MPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAG 482
Query: 389 LVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSN 448
V +A E I++M ++P+A +W LLGAC H L L E+A L + EP ++G YVLLS+
Sbjct: 483 QVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSS 542
Query: 449 LYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGD-RSHPQSQDVYAXXX 507
+ AS +W DV +RK+M + V K PG S +E+G +V+ FT G ++HP+ +
Sbjct: 543 INASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLE 602
Query: 508 XXXXXXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLR 567
GY P +VL D++EEEK +LS HSE++A+A+ LL G PIRVMKNLR
Sbjct: 603 KTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLR 662
Query: 568 VCADCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
VC DCH AIKLISKV +REI++RD +RFHHF G+CSC+DYW
Sbjct: 663 VCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 106/227 (46%), Gaps = 13/227 (5%)
Query: 97 MSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKA 156
+S A VF ++ + + TW MI+ Y AL + QM V P + +L
Sbjct: 281 ISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSV 340
Query: 157 VSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR----- 211
+ +++ G +H+ ++ F+ V+V + L+ +Y CG+ A VF+ + +
Sbjct: 341 CATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMW 400
Query: 212 ------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYL-L 264
+A +G EAL +F EM ++G P+ T++++L+AC+ G LE G + +
Sbjct: 401 NSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMES 460
Query: 265 KAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEER-NVVSWTTLI 310
K + + + +D+ + G + +A ++ M + + W L+
Sbjct: 461 KFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALL 507
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/560 (38%), Positives = 315/560 (56%), Gaps = 58/560 (10%)
Query: 65 QIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAE 124
Q+H +++HG+ H +G LI + + +A VF + PN+ WN +I
Sbjct: 127 QMHCQALKHGLESH-LFVGTTLI-GMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFR 184
Query: 125 SQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFV 184
D A + +M + HT S NV
Sbjct: 185 GNDVAGAREIFDKMLVR-----NHT----------SWNV--------------------- 208
Query: 185 RNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMSANGV 233
+L Y G+ ESA ++F M R A NG NE+ FRE+ G+
Sbjct: 209 ---MLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGM 265
Query: 234 EPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQ 293
P+ ++ +LSAC++ G+ E G+ +H ++ KAG + V NAL+D+Y++CG++ A+
Sbjct: 266 SPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARL 325
Query: 294 VF-GEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCG 352
VF G E+R +VSWT++I GLA++G G + P I+F+ +L+ACSH G
Sbjct: 326 VFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAG 385
Query: 353 MLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTL 412
+++EG DYF MK Y I P IEHYGCMVDL R+G +++AY++I MP+ P A++WRTL
Sbjct: 386 LIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTL 445
Query: 413 LGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVK 472
LGAC+ HG++ L E + L +L+P +SGD VLLSN YA+ +W DV +IRKSM+ +K
Sbjct: 446 LGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIK 505
Query: 473 KTPGYSLVELGNRVYEFTMGDRSHPQSQDVYA---XXXXXXXXXXXXGYVPRTENVLADI 529
KT +SLVE+G +Y+FT G++ + D+ A GY P + L D+
Sbjct: 506 KTTAWSLVEVGKTMYKFTAGEK--KKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDV 563
Query: 530 EEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDREIVI 589
EEEEKE +S HSEK+A+AF L + G IR++KNLR+C DCH +KL SKVY EI++
Sbjct: 564 EEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILV 623
Query: 590 RDRSRFHHFRGGKCSCKDYW 609
RDR+RFH F+ G CSC+DYW
Sbjct: 624 RDRNRFHSFKDGSCSCRDYW 643
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 174/374 (46%), Gaps = 31/374 (8%)
Query: 49 CISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIR 108
C+SLL C + + L QIH I++GV + GK ++ +S+S + YA +
Sbjct: 8 CLSLLNSCKNLR-ALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFP 66
Query: 109 NPNVFTWNTMIRGYAESQDPKPALH-FYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGE 167
P+ F +NT++RGY+ES +P ++ F M V PD+ ++ F++KAV ++R G
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126
Query: 168 ALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFRE 227
+H +K+G ES +FV +L+ +Y CG E A KVF+ M
Sbjct: 127 QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMH------------------ 168
Query: 228 MSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGS 287
+P+ ++++AC + R + L N N +L Y K G
Sbjct: 169 ------QPNLVAWNAVITACFRGNDVAGAREI----FDKMLVRNHTSWNVMLAGYIKAGE 218
Query: 288 IREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYA 347
+ A+++F EM R+ VSW+T+IVG+A NG ++P E++ GVL A
Sbjct: 219 LESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSA 278
Query: 348 CSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAV 407
CS G + G E+ G + + ++D+ SR G V A + M + V
Sbjct: 279 CSQSGSFEFG-KILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIV 337
Query: 408 IWRTLLGACTIHGH 421
W +++ +HG
Sbjct: 338 SWTSMIAGLAMHGQ 351
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 116/283 (40%), Gaps = 26/283 (9%)
Query: 162 NVREGEALHSVTIKNGFESLVFVRNSL-LHIYAACGDT------------ESAHKVFESM 208
N+R +H + IK G ++ + L LH + D E +F ++
Sbjct: 17 NLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTL 76
Query: 209 TDRFALNGRPNEALTLFREMSANG-VEPDGFTVVSLLSACAELGALELGRRVHVYLLKAG 267
++ + P+ ++ +F EM G V PD F+ ++ A +L G ++H LK G
Sbjct: 77 VRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHG 136
Query: 268 LRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXX 327
L +L V L+ +Y CG + A++VF EM + N+V+W +I F
Sbjct: 137 LESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITAC----FRGNDVAGAR 192
Query: 328 XXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRA 387
+ L ++ +L G L+ F M ++ + M+ ++
Sbjct: 193 EIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVS-----WSTMIVGIAHN 247
Query: 388 GLVKQAYEY---IQNMPVQPNAVIWRTLLGACTIHGHLSLGEI 427
G +++ Y +Q + PN V +L AC+ G G+I
Sbjct: 248 GSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKI 290
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/522 (38%), Positives = 297/522 (56%), Gaps = 12/522 (2%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A VF + + + TWN MI G + + + L +R+M PD +T + +
Sbjct: 44 ARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAG 103
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRF------- 212
+V G+ +H TIK G E + V +SL H+Y G + V SM R
Sbjct: 104 LRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTL 163
Query: 213 ----ALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGL 268
A NG P L L++ M +G P+ T V++LS+C++L G+++H +K G
Sbjct: 164 IMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGA 223
Query: 269 RENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXX 328
+ VV++L+ +Y+KCG + +A + F E E+ + V W+++I +G G
Sbjct: 224 SSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNT 283
Query: 329 XXXQ-KLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRA 387
Q + E+ F+ +LYACSH G+ D+G + F M E+YG P ++HY C+VDLL RA
Sbjct: 284 MAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRA 343
Query: 388 GLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLS 447
G + QA I++MP++ + VIW+TLL AC IH + + + +L+++P S YVLL+
Sbjct: 344 GCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLA 403
Query: 448 NLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXX 507
N++AS +RW DV +RKSM VKK G S E V++F MGDRS +S+++Y+
Sbjct: 404 NVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLK 463
Query: 508 XXXXXXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLR 567
GY P T +VL D++EEEKE L HSEK+A+AF L+ G PIR++KNLR
Sbjct: 464 ELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLR 523
Query: 568 VCADCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
VC+DCH+A K IS + +REI +RD SRFHHF GKCSC DYW
Sbjct: 524 VCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 117/250 (46%), Gaps = 19/250 (7%)
Query: 186 NSLLHIYAACGDTESAHKVFESMTDR--------------FALNGRPNEALTLFREMSAN 231
N L++ Y GD +A KVF+ M DR F N E L+LFREM
Sbjct: 29 NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFN---EEGLSLFREMHGL 85
Query: 232 GVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREA 291
G PD +T+ S+ S A L ++ +G+++H Y +K GL +L V ++L +Y + G +++
Sbjct: 86 GFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDG 145
Query: 292 QQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHC 351
+ V M RN+V+W TLI+G A NG P +ITFV VL +CS
Sbjct: 146 EIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDL 205
Query: 352 GMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRT 411
+ +G + G + + ++ + S+ G + A + + V+W +
Sbjct: 206 AIRGQG-QQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE-DEDEVMWSS 263
Query: 412 LLGACTIHGH 421
++ A HG
Sbjct: 264 MISAYGFHGQ 273
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/523 (37%), Positives = 303/523 (57%), Gaps = 13/523 (2%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A V + NV +W MI Y+++ AL + +M S +P+ T+ +L + +
Sbjct: 106 ARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIR 165
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-------- 211
+ + G+ +H + +K ++S +FV +SLL +YA G + A ++FE + +R
Sbjct: 166 ASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAI 225
Query: 212 ---FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGL 268
+A G EAL +F + + G+ P+ T SLL+A + L L+ G++ H ++L+ L
Sbjct: 226 IAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRREL 285
Query: 269 RENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXX 328
+ N+L+D+Y+KCG++ A+++F M ER +SW ++VG + +G G
Sbjct: 286 PFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRL 345
Query: 329 XXXQK-LAPGEITFVGVLYACSHCGMLDEGFDYFRRM-KEEYGIAPRIEHYGCMVDLLSR 386
+K + P +T + VL CSH M D G + F M EYG P EHYGC+VD+L R
Sbjct: 346 MRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGR 405
Query: 387 AGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLL 446
AG + +A+E+I+ MP +P A + +LLGAC +H + +GE L+++EP+++G+YV+L
Sbjct: 406 AGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVIL 465
Query: 447 SNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXX 506
SNLYAS RW DV +R M+Q V K PG S ++ ++ F DR+HP+ ++V A
Sbjct: 466 SNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKM 525
Query: 507 XXXXXXXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNL 566
GYVP VL D++EE+KE+ L HSEK+A+ F L+ T G PIRV KNL
Sbjct: 526 KEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNL 585
Query: 567 RVCADCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
R+C DCH K+ SKV++RE+ +RD++RFH G CSC DYW
Sbjct: 586 RICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 143/299 (47%), Gaps = 21/299 (7%)
Query: 137 QMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACG 196
+M M E H Y LL A +R+G+ +H+ IK + ++R LL Y C
Sbjct: 42 EMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCD 101
Query: 197 DTESAHKVFE-----------SMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLS 245
E A KV + +M R++ G +EALT+F EM + +P+ FT ++L+
Sbjct: 102 CLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLT 161
Query: 246 ACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVS 305
+C L LG+++H ++K ++ V ++LLD+YAK G I+EA+++F + ER+VVS
Sbjct: 162 SCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVS 221
Query: 306 WTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFD----YF 361
T +I G A G + ++P +T+ +L A S +LD G
Sbjct: 222 CTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVL 281
Query: 362 RRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHG 420
RR Y + ++D+ S+ G + A NMP + A+ W +L + HG
Sbjct: 282 RRELPFYAVLQ-----NSLIDMYSKCGNLSYARRLFDNMP-ERTAISWNAMLVGYSKHG 334
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 86/187 (45%), Gaps = 4/187 (2%)
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
NGR EAL EM+ G E +LL+AC + AL G+RVH +++K ++
Sbjct: 33 NGRLQEALL---EMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYL 89
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKL 334
LL Y KC + +A++V EM E+NVVSWT +I + G
Sbjct: 90 RTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDG 149
Query: 335 APGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAY 394
P E TF VL +C L G + ++ I ++D+ ++AG +K+A
Sbjct: 150 KPNEFTFATVLTSCIRASGLGLG-KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAR 208
Query: 395 EYIQNMP 401
E + +P
Sbjct: 209 EIFECLP 215
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 381 bits (978), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/567 (36%), Positives = 304/567 (53%), Gaps = 31/567 (5%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSY--------AHLVFTMIRNPNVFTW 115
KQIHA +++ G ++ V SA Y A +F I N+ TW
Sbjct: 128 KQIHALAVKCG----------RILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETW 177
Query: 116 NTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIK 175
N I P+ A+ + + P++ T+ L A S L++ G LH + ++
Sbjct: 178 NAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLR 237
Query: 176 NGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFAL-----------NGRPNEALTL 224
+GF++ V V N L+ Y C S+ +F M + A+ N +A L
Sbjct: 238 SGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVL 297
Query: 225 FREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAK 284
+ + VE F + S+LSACA + LELGR +H + +KA + + V +AL+D+Y K
Sbjct: 298 YLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGK 357
Query: 285 CGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAP--GEITFV 342
CG I +++Q F EM E+N+V+ +LI G A G + P +TFV
Sbjct: 358 CGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFV 417
Query: 343 GVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPV 402
+L ACS G ++ G F M+ YGI P EHY C+VD+L RAG+V++AYE+I+ MP+
Sbjct: 418 SLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPI 477
Query: 403 QPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTI 462
QP +W L AC +HG LG +A +L KL+PK SG++VLLSN +A+ RW + T+
Sbjct: 478 QPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTV 537
Query: 463 RKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRT 522
R+ + G+KK GYS + + N+V+ F DRSH ++++ GY P
Sbjct: 538 REELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDL 597
Query: 523 ENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKV 582
+ L D+EEEEK +S+HSEK+A+AF LL+ PIR+ KNLR+C DCH K +S
Sbjct: 598 KLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGS 657
Query: 583 YDREIVIRDRSRFHHFRGGKCSCKDYW 609
REI++RD +RFH F+ G CSCKDYW
Sbjct: 658 VKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 190/438 (43%), Gaps = 30/438 (6%)
Query: 57 ASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWN 116
ASS + +HA ++ P + +LI L P S A LV + NV +W
Sbjct: 19 ASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPES-ARLVLRLTPARNVVSWT 77
Query: 117 TMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKN 176
++I G A++ AL + +M V P+ T+P KAV+ G+ +H++ +K
Sbjct: 78 SLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKC 137
Query: 177 GFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLF 225
G VFV S +Y + A K+F+ + +R +GRP EA+ F
Sbjct: 138 GRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAF 197
Query: 226 REMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKC 285
E P+ T + L+AC++ L LG ++H +L++G ++ V N L+D Y KC
Sbjct: 198 IEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKC 257
Query: 286 GSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVL 345
IR ++ +F EM +N VSW +L+ N + + VL
Sbjct: 258 KQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVL 317
Query: 346 YACSHCGMLDEGFDYFRRMKEEYGIAPRIEHY----GCMVDLLSRAGLVKQAYEYIQNMP 401
AC+ L+ G R + + +E +VD+ + G ++ + + MP
Sbjct: 318 SACAGMAGLELG-----RSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP 372
Query: 402 VQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSG---DYVLLSNLYASERRWTD 458
+ N V +L+G + H ++A + ++ P+ G +Y+ +L ++ R
Sbjct: 373 -EKNLVTRNSLIGG---YAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGA 428
Query: 459 VQTIRKSMLQDGVKKTPG 476
V+ K + D ++ T G
Sbjct: 429 VENGMK--IFDSMRSTYG 444
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 111/276 (40%), Gaps = 14/276 (5%)
Query: 152 FLLKAVSKSLNVREGEALHSVTIKN-GFESLVFVRNSLLHIYAACGDTESAHKV------ 204
LLK + ++R G +H+ +K F+ N L+++Y+ ESA V
Sbjct: 11 LLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPA 70
Query: 205 -----FESMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRV 259
+ S+ A NG + AL F EM GV P+ FT A A L G+++
Sbjct: 71 RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI 130
Query: 260 HVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFG 319
H +K G ++ V + D+Y K +A+++F E+ ERN+ +W I +G
Sbjct: 131 HALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRP 190
Query: 320 XXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGC 379
P ITF L ACS L+ G + G +
Sbjct: 191 REAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ-LHGLVLRSGFDTDVSVCNG 249
Query: 380 MVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGA 415
++D + ++ + M + NAV W +L+ A
Sbjct: 250 LIDFYGKCKQIRSSEIIFTEMGTK-NAVSWCSLVAA 284
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 380 bits (977), Expect = e-105, Method: Compositional matrix adjust.
Identities = 224/587 (38%), Positives = 328/587 (55%), Gaps = 22/587 (3%)
Query: 42 LPHVLTKCISLLQYCASSK-HKL-KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSY 99
LP T IS L CAS K KL +QIH S++ G+ L N + L+ T+ + + ++
Sbjct: 412 LPGSFT-LISSLSSCASLKWAKLGQQIHGESLKLGIDL-NVSVSNALM-TLYAETGYLNE 468
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKP-ALHFYRQMTMSCVEPDTHTYPFLLKAVS 158
+F+ + + +WN++I A S+ P A+ + + + + T+ +L AVS
Sbjct: 469 CRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVS 528
Query: 159 KSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR------- 211
G+ +H + +KN N+L+ Y CG+ + K+F M +R
Sbjct: 529 SLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWN 588
Query: 212 -----FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKA 266
+ N +AL L M G D F ++LSA A + LE G VH ++A
Sbjct: 589 SMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRA 648
Query: 267 GLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXX 326
L ++ V +AL+D+Y+KCG + A + F M RN SW ++I G A +G G
Sbjct: 649 CLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLF 708
Query: 327 XXXXXQ-KLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLS 385
+ P +TFVGVL ACSH G+L+EGF +F M + YG+APRIEH+ CM D+L
Sbjct: 709 ETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLG 768
Query: 386 RAGLVKQAYEYIQNMPVQPNAVIWRTLLGACT-IHGHLS-LGEIARSHLLKLEPKHSGDY 443
RAG + + ++I+ MP++PN +IWRT+LGAC +G + LG+ A L +LEP+++ +Y
Sbjct: 769 RAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNY 828
Query: 444 VLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVY 503
VLL N+YA+ RW D+ RK M VKK GYS V + + V+ F GD+SHP + +Y
Sbjct: 829 VLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIY 888
Query: 504 AXXXXXXXXXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGT-PIRV 562
GYVP+T L D+E+E KE+ LSYHSEK+A+AF+L T PIR+
Sbjct: 889 KKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRI 948
Query: 563 MKNLRVCADCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
MKNLRVC DCH A K ISK+ R+I++RD +RFHHF+ G CSC D+W
Sbjct: 949 MKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 124/238 (52%), Gaps = 18/238 (7%)
Query: 94 SAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFL 153
S +SYA VF + N T N ++ G + + A + M S ++ +Y L
Sbjct: 256 SGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN-SMIDVSPESYVIL 314
Query: 154 LKA-----VSKSLNVREGEALHSVTIKNGF-ESLVFVRNSLLHIYAACGDTESAHKVFES 207
L + +++ + +++G +H I G + +V + N L+++YA CG A +VF
Sbjct: 315 LSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYF 374
Query: 208 MTDRFAL-----------NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELG 256
MTD+ ++ NG EA+ ++ M + + P FT++S LS+CA L +LG
Sbjct: 375 MTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLG 434
Query: 257 RRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLA 314
+++H LK G+ N+ V NAL+ LYA+ G + E +++F M E + VSW ++I LA
Sbjct: 435 QQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALA 492
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 153/341 (44%), Gaps = 24/341 (7%)
Query: 95 APMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLL 154
+ YA F I N +WN++I Y+++ D + A + M P +T+ L+
Sbjct: 154 GSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLV 213
Query: 155 KAVSK--SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRF 212
+VR E + K+G + +FV + L+ +A G A KVF M R
Sbjct: 214 TTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRN 273
Query: 213 A--LNG---------RPNEALTLFREM-SANGVEPDGFTVVSLLSA-----CAELGALEL 255
A LNG EA LF +M S V P+ + + LLS+ AE L+
Sbjct: 274 AVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI--LLSSFPEYSLAEEVGLKK 331
Query: 256 GRRVHVYLLKAGLRENL-HVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLA 314
GR VH +++ GL + + + N L+++YAKCGSI +A++VF M +++ VSW ++I GL
Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLD 391
Query: 315 VNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRI 374
NG + PG T + L +C+ G + GI +
Sbjct: 392 QNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLG-QQIHGESLKLGIDLNV 450
Query: 375 EHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGA 415
++ L + G + + + +MP + + V W +++GA
Sbjct: 451 SVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 111/236 (47%), Gaps = 22/236 (9%)
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGR 217
HS KN + V++ N+L++ Y GD+ SA KVF+ M R ++ NG
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 218 PNEALTLFREMSANGVEPDGFTVVSLLSACAELGALEL--GRRVHVYLLKAGLRENLHVV 275
EAL R+M G+ + + VS+L AC E+G++ + GR++H + K + V
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 276 NALLDLYAKC-GSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKL 334
N L+ +Y KC GS+ A FG++E +N VSW ++I + G
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 335 APGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLV 390
P E TF ++ + C + + R+ E+ I I+ G + DL +GLV
Sbjct: 203 RPTEYTFGSLV--TTACSLTEPDV----RLLEQ--IMCTIQKSGLLTDLFVGSGLV 250
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 110/236 (46%), Gaps = 16/236 (6%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A VF + N +W ++ GY+ + + K AL F R M + + + + +L+A +
Sbjct: 55 ARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQE 114
Query: 160 --SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAAC-----------GDTESAHKV-F 205
S+ + G +H + K + V N L+ +Y C GD E + V +
Sbjct: 115 IGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSW 174
Query: 206 ESMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGA--LELGRRVHVYL 263
S+ ++ G A +F M +G P +T SL++ L + L ++ +
Sbjct: 175 NSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTI 234
Query: 264 LKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFG 319
K+GL +L V + L+ +AK GS+ A++VF +ME RN V+ L+VGL +G
Sbjct: 235 QKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWG 290
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
Query: 241 VSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEE 300
+S + +C +G R H L K L +++++ N L++ Y + G A++VF EM
Sbjct: 7 LSFVQSC--VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 301 RNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCG 352
RN VSW ++ G + NG + + + FV VL AC G
Sbjct: 65 RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIG 116
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/507 (37%), Positives = 285/507 (56%), Gaps = 11/507 (2%)
Query: 114 TWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVT 173
+W MI+G A++ K A+ +R+M + ++ D + + +L A + EG+ +H+
Sbjct: 237 SWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACI 296
Query: 174 IKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEAL 222
I+ F+ ++V ++L+ +Y C A VF+ M + + GR EA+
Sbjct: 297 IRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAV 356
Query: 223 TLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLY 282
+F +M +G++PD +T+ +SACA + +LE G + H + +GL + V N+L+ LY
Sbjct: 357 KIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLY 416
Query: 283 AKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFV 342
KCG I ++ ++F EM R+ VSWT ++ A G L P +T
Sbjct: 417 GKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLT 476
Query: 343 GVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPV 402
GV+ ACS G++++G YF+ M EYGI P I HY CM+DL SR+G +++A +I MP
Sbjct: 477 GVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPF 536
Query: 403 QPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTI 462
P+A+ W TLL AC G+L +G+ A L++L+P H Y LLS++YAS+ +W V +
Sbjct: 537 PPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQL 596
Query: 463 RKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRT 522
R+ M + VKK PG S ++ +++ F+ D S P +YA GY P T
Sbjct: 597 RRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDT 656
Query: 523 ENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKV 582
V D+EE K + L+YHSE++AIAF L+ G PIRV KNLRVC DCH A K IS V
Sbjct: 657 SFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSV 716
Query: 583 YDREIVIRDRSRFHHFRGGKCSCKDYW 609
REI++RD RFH F+ G CSC D+W
Sbjct: 717 TGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 155/359 (43%), Gaps = 52/359 (14%)
Query: 103 VFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTH-TYPFLLKAVSKSL 161
F + + + TWN +I GY+ S A+ Y M T T +LK S +
Sbjct: 94 TFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNG 153
Query: 162 NVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------- 211
+V G+ +H IK GFES + V + LL++YA G A KVF + DR
Sbjct: 154 HVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMG 213
Query: 212 -------------------------------FALNGRPNEALTLFREMSANGVEPDGFTV 240
A NG EA+ FREM G++ D +
Sbjct: 214 GLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPF 273
Query: 241 VSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEE 300
S+L AC LGA+ G+++H +++ +++++V +AL+D+Y KC + A+ VF M++
Sbjct: 274 GSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQ 333
Query: 301 RNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDY 360
+NVVSWT ++VG G + P T + AC++ L+EG +
Sbjct: 334 KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQF 393
Query: 361 FRRMKEEYGIAPRIEHY----GCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGA 415
+ I + HY +V L + G + + M V+ +AV W ++ A
Sbjct: 394 HGK-----AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVSA 446
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 136/283 (48%), Gaps = 20/283 (7%)
Query: 41 PLPHVLTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYA 100
P VL C L + ++ KQIHA IR H +G LI + YA
Sbjct: 272 PFGSVLPACGGL-----GAINEGKQIHACIIRTNFQDH-IYVGSALIDMYCKCKC-LHYA 324
Query: 101 HLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKS 160
VF ++ NV +W M+ GY ++ + A+ + M S ++PD +T + A +
Sbjct: 325 KTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANV 384
Query: 161 LNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALN----- 215
++ EG H I +G V V NSL+ +Y CGD + + ++F M R A++
Sbjct: 385 SSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMV 444
Query: 216 ------GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKA-GL 268
GR E + LF +M +G++PDG T+ ++SAC+ G +E G+R + G+
Sbjct: 445 SAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGI 504
Query: 269 RENLHVVNALLDLYAKCGSIREAQQVFGEME-ERNVVSWTTLI 310
++ + ++DL+++ G + EA + M + + WTTL+
Sbjct: 505 VPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLL 547
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 103/237 (43%), Gaps = 59/237 (24%)
Query: 182 VFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEAL----TLFR 226
+F N+LL Y+ G FE + DR ++L+G A+ T+ R
Sbjct: 72 LFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMR 131
Query: 227 EMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCG 286
+ SAN T++++L + G + LG+++H ++K G L V + LL +YA G
Sbjct: 132 DFSANLTR---VTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVG 188
Query: 287 SIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLY 346
I +A++VF +++RN V + +L+ GL
Sbjct: 189 CISDAKKVFYGLDDRNTVMYNSLMGGLLA------------------------------- 217
Query: 347 ACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQ 403
CGM+++ FR M+++ + M+ L++ GL K+A E + M VQ
Sbjct: 218 ----CGMIEDALQLFRGMEKDS------VSWAAMIKGLAQNGLAKEAIECFREMKVQ 264
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/575 (35%), Positives = 316/575 (54%), Gaps = 18/575 (3%)
Query: 52 LLQYCASSK--HKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRN 109
LL C S+K H +I + + + HNP + LI T+ S+ + A +F + +
Sbjct: 137 LLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLI-TLFSVCRRLDLARKIFDDVTD 195
Query: 110 PNVFT---WNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREG 166
++ T W M GY+ + P+ AL Y M S +EP + LKA ++R G
Sbjct: 196 SSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVG 255
Query: 167 EALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNG---------- 216
+H+ +K + V N LL +Y G + A KVF+ M++R +
Sbjct: 256 RGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKK 315
Query: 217 -RPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVV 275
R +E LFR+M + T+ ++L AC+ + AL G+ +H +LK+ + ++ ++
Sbjct: 316 VRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLL 375
Query: 276 NALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLA 335
N+L+D+Y KCG + +++VF M +++ SW ++ A+NG +A
Sbjct: 376 NSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVA 435
Query: 336 PGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYE 395
P ITFV +L CS G+ + G F RMK E+ ++P +EHY C+VD+L RAG +K+A +
Sbjct: 436 PDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVK 495
Query: 396 YIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERR 455
I+ MP +P+A IW +LL +C +HG++S+GEIA L LEP + G+YV++SN+YA +
Sbjct: 496 VIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKM 555
Query: 456 WTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXX-XXXXXXXX 514
W +V IR+ M Q GVKK G S V++ +++ F G ++ D Y
Sbjct: 556 WDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIE 615
Query: 515 XXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHM 574
GY P T VL D++EE K + HSE++A + L++T G PIR+ KNLRVCADCH
Sbjct: 616 KSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHS 675
Query: 575 AIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
+K++S+V R IV+RD RFHHF G CSCKDYW
Sbjct: 676 WMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/524 (37%), Positives = 293/524 (55%), Gaps = 23/524 (4%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A +F + +V TW TM+ GY ++ A + M E ++ +L +
Sbjct: 191 AREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP----EKTEVSWTSMLMGYVQ 246
Query: 160 SLNVREGEALHSVT-IKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR------- 211
+ + + E L V +K V N+++ G+ A +VF+SM +R
Sbjct: 247 NGRIEDAEELFEVMPVKP-----VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQT 301
Query: 212 ----FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAG 267
NG EAL LF M GV P T++S+LS CA L +L G++VH L++
Sbjct: 302 VIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQ 361
Query: 268 LRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXX 327
+++V + L+ +Y KCG + +++ +F ++++ W ++I G A +G G
Sbjct: 362 FDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFC 421
Query: 328 XXXXQ-KLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSR 386
P E+TFV L ACS+ GM++EG + M+ +G+ P HY CMVD+L R
Sbjct: 422 EMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGR 481
Query: 387 AGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLL 446
AG +A E I +M V+P+A +W +LLGAC H L + E L+++EP++SG Y+LL
Sbjct: 482 AGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILL 541
Query: 447 SNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGD-RSHPQSQDVYAX 505
SN+YAS+ RW DV +RK M V+K+PG S E+ N+V+ FT G SHP+ + +
Sbjct: 542 SNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKI 601
Query: 506 XXXXXXXXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKN 565
GY P L D++EEEK +L YHSE++A+A+ LL + G PIRVMKN
Sbjct: 602 LDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKN 661
Query: 566 LRVCADCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
LRVC+DCH AIK+ISKV +REI++RD +RFHHFR G+CSCKDYW
Sbjct: 662 LRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 106/269 (39%), Gaps = 27/269 (10%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A VF ++ NV +W +++GY + A + +M E + ++ +L +
Sbjct: 98 ARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP----EKNKVSWTVMLIGFLQ 153
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-------- 211
+ + L+ + R S++H G + A ++F+ M++R
Sbjct: 154 DGRIDDACKLYEMIPDKDN----IARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTM 209
Query: 212 ---FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGL 268
+ N R ++A +F M E + S+L + G +E L +
Sbjct: 210 VTGYGQNNRVDDARKIFDVMP----EKTEVSWTSMLMGYVQNGRIEDAEE----LFEVMP 261
Query: 269 RENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXX 328
+ + NA++ + G I +A++VF M+ERN SW T+I NGF
Sbjct: 262 VKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFIL 321
Query: 329 XXXQKLAPGEITFVGVLYACSHCGMLDEG 357
Q + P T + +L C+ L G
Sbjct: 322 MQKQGVRPTFPTLISILSVCASLASLHHG 350
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 10/143 (6%)
Query: 271 NLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXX 330
N+ N L+ Y K G I EA++VF M ERNVVSWT L+ G NG
Sbjct: 78 NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP 137
Query: 331 XQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLV 390
+ + +G L G +D+ + + ++ IA M+ L + G V
Sbjct: 138 EKNKVSWTVMLIGFL----QDGRIDDACKLYEMIPDKDNIA-----RTSMIHGLCKEGRV 188
Query: 391 KQAYEYIQNMPVQPNAVIWRTLL 413
+A E M + + + W T++
Sbjct: 189 DEAREIFDEMS-ERSVITWTTMV 210
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/571 (33%), Positives = 320/571 (56%), Gaps = 15/571 (2%)
Query: 52 LLQYCASSKHKL--KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRN 109
+LQ CA + + K H IR + L +++ S + A VF +
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIR--IDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLE 124
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
++ +WNTMI Y ++ AL + +M + T +L A + + E + L
Sbjct: 125 RSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKL 184
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRP 218
H +++K + ++V +LL +YA CG + A +VFESM D+ + N
Sbjct: 185 HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNY 244
Query: 219 NEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNAL 278
EAL L+R +E + FT+ S++ AC+ L AL G+++H + K+G N+ V ++
Sbjct: 245 EEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSA 304
Query: 279 LDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGE 338
+D+YAKCGS+RE+ +F E++E+N+ W T+I G A + + P E
Sbjct: 305 VDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNE 364
Query: 339 ITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQ 398
+TF +L C H G+++EG +F+ M+ YG++P + HY CMVD+L RAGL+ +AYE I+
Sbjct: 365 VTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIK 424
Query: 399 NMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTD 458
++P P A IW +LL +C ++ +L L E+A L +LEP+++G++VLLSN+YA+ ++W +
Sbjct: 425 SIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEE 484
Query: 459 VQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGY 518
+ RK + VKK G S +++ ++V+ F++G+ HP+ +++ + GY
Sbjct: 485 IAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGY 544
Query: 519 VPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKL 578
P E+ L D+E +KE+ L HSEK+A+ F L+ +P+R+MKNLR+C DCH +K
Sbjct: 545 KPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKA 604
Query: 579 ISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
S R I++RD +RFHHF G CSC D+W
Sbjct: 605 ASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/553 (36%), Positives = 307/553 (55%), Gaps = 14/553 (2%)
Query: 61 HKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIR 120
K + +H + G+ +N +G L+ ++ MS + V + +V WN +I
Sbjct: 362 EKGRILHGLVVVSGL-FYNQIIGNALV-SMYGKIGEMSESRRVLLQMPRRDVVAWNALIG 419
Query: 121 GYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVRE-GEALHSVTIKNGFE 179
GYAE +DP AL ++ M + V + T +L A ++ E G+ LH+ + GFE
Sbjct: 420 GYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFE 479
Query: 180 SLVFVRNSLLHIYAACGDTESAHKVFESMTDR--------FALN---GRPNEALTLFREM 228
S V+NSL+ +YA CGD S+ +F + +R A N G E L L +M
Sbjct: 480 SDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 539
Query: 229 SANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSI 288
+ GV D F+ LSA A+L LE G+++H +K G + + NA D+Y+KCG I
Sbjct: 540 RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEI 599
Query: 289 REAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYAC 348
E ++ R++ SW LI L +G+ + PG +TFV +L AC
Sbjct: 600 GEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTAC 659
Query: 349 SHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVI 408
SH G++D+G Y+ + ++G+ P IEH C++DLL R+G + +A +I MP++PN ++
Sbjct: 660 SHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV 719
Query: 409 WRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQ 468
WR+LL +C IHG+L G A +L KLEP+ YVL SN++A+ RW DV+ +RK M
Sbjct: 720 WRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGF 779
Query: 469 DGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLAD 528
+KK S V+L ++V F +GDR+HPQ+ ++YA GYV T L D
Sbjct: 780 KNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQD 839
Query: 529 IEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDREIV 588
+EE+KE L HSE++A+A+ L++T G+ +R+ KNLR+C+DCH K +S+V R IV
Sbjct: 840 TDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIV 899
Query: 589 IRDRSRFHHFRGG 601
+RD+ RFHHF G
Sbjct: 900 LRDQYRFHHFERG 912
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 173/394 (43%), Gaps = 19/394 (4%)
Query: 39 ENPLPHVLTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMS 98
EN + V++ C LL+ + + + Q+ + + + N + +++ +
Sbjct: 143 ENSMSLVISSC-GLLKDESLGRQIIGQVVKSGLESKLAVENS------LISMLGSMGNVD 195
Query: 99 YAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVS 158
YA+ +F + + +WN++ YA++ + + + M E ++ T LL +
Sbjct: 196 YANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLG 255
Query: 159 KSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR------- 211
+ + G +H + +K GF+S+V V N+LL +YA G + A+ VF+ M +
Sbjct: 256 HVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNS 315
Query: 212 ----FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAG 267
F +GR +AL L M ++G + T S L+AC E GR +H ++ +G
Sbjct: 316 LMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSG 375
Query: 268 LRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXX 327
L N + NAL+ +Y K G + E+++V +M R+VV+W LI G A +
Sbjct: 376 LFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQ 435
Query: 328 XXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRA 387
+ ++ IT V VL AC G L E G ++ + ++
Sbjct: 436 TMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKC 495
Query: 388 GLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGH 421
G + + + + N + W +L A HGH
Sbjct: 496 GDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGH 528
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 110/219 (50%), Gaps = 12/219 (5%)
Query: 111 NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNV-REGEAL 169
N +WNTM+ G + F+R+M ++P + L+ A +S ++ REG +
Sbjct: 5 NEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQV 64
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRP 218
H K+G S V+V ++LH+Y G + KVFE M DR ++ G P
Sbjct: 65 HGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEP 124
Query: 219 NEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNAL 278
E + +++ M GV + ++ ++S+C L LGR++ ++K+GL L V N+L
Sbjct: 125 EEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSL 184
Query: 279 LDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNG 317
+ + G++ A +F +M ER+ +SW ++ A NG
Sbjct: 185 ISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 223
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 165/385 (42%), Gaps = 30/385 (7%)
Query: 51 SLLQYCASSKHKLK---QIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMI 107
SL+ C S + Q+H F + G L + I + + +S + VF +
Sbjct: 46 SLVTACGRSGSMFREGVQVHGFVAKSG--LLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 103
Query: 108 RNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGE 167
+ NV +W +++ GY++ +P+ + Y+ M V + ++ ++ + + G
Sbjct: 104 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 163
Query: 168 ALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNG 216
+ +K+G ES + V NSL+ + + G+ + A+ +F+ M++R +A NG
Sbjct: 164 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 223
Query: 217 RPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVN 276
E+ +F M E + TV +LLS + + GR +H ++K G + V N
Sbjct: 224 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCN 283
Query: 277 ALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAP 336
LL +YA G EA VF +M ++++SW +L+ +G +
Sbjct: 284 TLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV 343
Query: 337 GEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHY------GCMVDLLSRAGLV 390
+TF L AC D+F + + +G+ + +V + + G +
Sbjct: 344 NYVTFTSALAACFTP-------DFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEM 396
Query: 391 KQAYEYIQNMPVQPNAVIWRTLLGA 415
++ + MP + + V W L+G
Sbjct: 397 SESRRVLLQMP-RRDVVAWNALIGG 420
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/519 (37%), Positives = 293/519 (56%), Gaps = 14/519 (2%)
Query: 103 VFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLN 162
+F + NV +W TMI G +++ AL ++ M C++ + + ++ A + +
Sbjct: 181 LFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPA 240
Query: 163 VREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE-----------SMTDR 211
G +H + IK GF +V SL+ YA C + KVF+ ++
Sbjct: 241 FHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSG 300
Query: 212 FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLREN 271
++LN + +AL++F M N + P+ T S L++C+ LG L+ G+ +H +K GL +
Sbjct: 301 YSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETD 360
Query: 272 LHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXX 331
V N+L+ +Y+ G++ +A VF ++ ++++VSW ++IVG A +G G
Sbjct: 361 AFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIR 420
Query: 332 QKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYG-IAPRIEHYGCMVDLLSRAGLV 390
P EITF G+L ACSHCG L++G F M I +I+HY CMVD+L R G +
Sbjct: 421 LNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKL 480
Query: 391 KQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLY 450
K+A E I+ M V+PN ++W LL AC +H + GE A + + L+ K S YVLLSN+Y
Sbjct: 481 KEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIY 540
Query: 451 ASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXX 510
AS RW++V +R M ++G+ K PG S V + + +EF GD+ P +Y
Sbjct: 541 ASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQ--PHCSRIYEKLEFLR 598
Query: 511 XXXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCA 570
GY P + L D+E+E+KE+ L YHSE++AIAF L+NT G+ + VMKNLRVC
Sbjct: 599 EKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCE 658
Query: 571 DCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
DCH IKLIS V REIV+RD RFHHF+ G CSC DYW
Sbjct: 659 DCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 146/346 (42%), Gaps = 35/346 (10%)
Query: 111 NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL- 169
+V +WN+MI G E D A+ + +M E ++ ++ +S V + E L
Sbjct: 96 DVVSWNSMISGCVECGDMNTAVKLFDEMP----ERSVVSWTAMVNGCFRSGKVDQAERLF 151
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFAL-----------NGRP 218
+ + +K+ NS++H Y G + A K+F+ M + + N R
Sbjct: 152 YQMPVKD-----TAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERS 206
Query: 219 NEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNAL 278
EAL LF+ M ++ +++ACA A +G +VH ++K G +V +L
Sbjct: 207 GEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASL 266
Query: 279 LDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGE 338
+ YA C I ++++VF E V WT L+ G ++N + P +
Sbjct: 267 ITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQ 326
Query: 339 ITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHY------GCMVDLLSRAGLVKQ 392
TF L +CS G LD G KE +G+A ++ +V + S +G V
Sbjct: 327 STFASGLNSCSALGTLDWG-------KEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVND 379
Query: 393 AYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPK 438
A + + + V W +++ C HG + +++L +
Sbjct: 380 AVSVFIKI-FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKE 424
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/589 (34%), Positives = 321/589 (54%), Gaps = 45/589 (7%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
++++AF G+ + N M L+ + +A + A +F N+ N M Y
Sbjct: 256 EKVYAFIRNSGIEV-NDLMVSALVDMYMKCNA-IDVAKRLFDEYGASNLDLCNAMASNYV 313
Query: 124 ESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVF 183
+ AL + M S V PD + + + S+ N+ G++ H ++NGFES
Sbjct: 314 RQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDN 373
Query: 184 VRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREM---- 228
+ N+L+ +Y C ++A ++F+ M+++ + NG + A F M
Sbjct: 374 ICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKN 433
Query: 229 ----------------------------SANGVEPDGFTVVSLLSACAELGALELGRRVH 260
S GV DG T++S+ SAC LGAL+L + ++
Sbjct: 434 IVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY 493
Query: 261 VYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGX 320
Y+ K G++ ++ + L+D++++CG A +F + R+V +WT I +A+ G
Sbjct: 494 YYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAE 553
Query: 321 XXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCM 380
Q L P + FVG L ACSH G++ +G + F M + +G++P HYGCM
Sbjct: 554 RAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCM 613
Query: 381 VDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHS 440
VDLL RAGL+++A + I++MP++PN VIW +LL AC + G++ + A + L P+ +
Sbjct: 614 VDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERT 673
Query: 441 GDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQ 500
G YVLLSN+YAS RW D+ +R SM + G++K PG S +++ + +EFT GD SHP+
Sbjct: 674 GSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMP 733
Query: 501 DVYAXXXXXXXXXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPI 560
++ A G+VP NVL D++E+EK LS HSEK+A+A+ L+++ GT I
Sbjct: 734 NIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTI 793
Query: 561 RVMKNLRVCADCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
R++KNLRVC+DCH K SKVY+REI++RD +RFH+ R GKCSC D+W
Sbjct: 794 RIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 171/369 (46%), Gaps = 45/369 (12%)
Query: 97 MSYAHLVFTMIRN-PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLK 155
+S+A VF + F +N++IRGYA S A+ + +M S + PD +T+PF L
Sbjct: 83 LSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLS 142
Query: 156 AVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---- 211
A +KS G +H + +K G+ +FV+NSL+H YA CG+ +SA KVF+ M++R
Sbjct: 143 ACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVS 202
Query: 212 -------FALNGRPNEALTL-FREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYL 263
+A +A+ L FR + V P+ T+V ++SACA+L LE G +V+ ++
Sbjct: 203 WTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI 262
Query: 264 LKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXX 323
+G+ N +V+AL+D+Y KC +I A+++F E N+ + G
Sbjct: 263 RNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREAL 322
Query: 324 XXXXXXXXQKLAPGEITFVGVLYACS-----------HCGMLDEGFDYFR---------- 362
+ P I+ + + +CS H +L GF+ +
Sbjct: 323 GVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMY 382
Query: 363 ----RMKEEYGIAPRIEH-----YGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLL 413
R + I R+ + + +V G V A+E + MP + N V W T++
Sbjct: 383 MKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMP-EKNIVSWNTII 441
Query: 414 GACTIHGHL 422
+ G L
Sbjct: 442 SG-LVQGSL 449
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 167/384 (43%), Gaps = 53/384 (13%)
Query: 53 LQYCASSKHKLK--QIHAFSIRHGVPLHNPDMG-KHLIFTIVSLSAPMSYAHLVFTMIRN 109
L CA S+ K QIH ++ G + D+ ++ + + + A VF +
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMG---YAKDLFVQNSLVHFYAECGELDSARKVFDEMSE 197
Query: 110 PNVFTWNTMIRGYAESQDPKPALH-FYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
NV +W +MI GYA K A+ F+R + V P++ T ++ A +K ++ GE
Sbjct: 198 RNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEK 257
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE-----------SMTDRFALNGR 217
+++ +G E + ++L+ +Y C + A ++F+ +M + G
Sbjct: 258 VYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGL 317
Query: 218 PNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNA 277
EAL +F M +GV PD +++S +S+C++L + G+ H Y+L+ G ++ NA
Sbjct: 318 TREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNA 377
Query: 278 LLDLYAKC-------------------------------GSIREAQQVFGEMEERNVVSW 306
L+D+Y KC G + A + F M E+N+VSW
Sbjct: 378 LIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSW 437
Query: 307 TTLIVGLAVNG--FGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRM 364
T+I GL V G F + + +T + + AC H G LD +
Sbjct: 438 NTIISGL-VQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLA-KWIYYY 495
Query: 365 KEEYGIAPRIEHYGCMVDLLSRAG 388
E+ GI + +VD+ SR G
Sbjct: 496 IEKNGIQLDVRLGTTLVDMFSRCG 519
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 152/348 (43%), Gaps = 61/348 (17%)
Query: 147 THTYPFLL------KAVSKSL----NVREGEALHSVTIKNGFESLVFVRNSLLHIYAACG 196
T T P LL KA SL + E + H K G ++ V L+ G
Sbjct: 19 TTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELG 78
Query: 197 DTES---AHKVFE------------SMTDRFALNGRPNEALTLFREMSANGVEPDGFTVV 241
ES A +VFE S+ +A +G NEA+ LF M +G+ PD +T
Sbjct: 79 TRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFP 138
Query: 242 SLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEER 301
LSACA+ A G ++H ++K G ++L V N+L+ YA+CG + A++VF EM ER
Sbjct: 139 FGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSER 198
Query: 302 NVVSWTTLIVGLAVNGFGXXXXXX-XXXXXXQKLAPGEITFVGVLYACSHCGMLDEG--- 357
NVVSWT++I G A F +++ P +T V V+ AC+ L+ G
Sbjct: 199 NVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKV 258
Query: 358 ----------------------------FDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGL 389
D +R+ +EYG A ++ M R GL
Sbjct: 259 YAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYG-ASNLDLCNAMASNYVRQGL 317
Query: 390 VKQA---YEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLK 434
++A + + + V+P+ + + + +C+ ++ G+ ++L+
Sbjct: 318 TREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/586 (33%), Positives = 310/586 (52%), Gaps = 53/586 (9%)
Query: 68 AFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQD 127
A + HG+ N L+ I + M AH +F I P+ F++N M+ Y + +
Sbjct: 80 ALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVN 139
Query: 128 PKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREG-EALHSVTIKNGFESLVFVRN 186
+ A F+ +M D ++ ++ ++ + + E +S+ KN N
Sbjct: 140 FEKAQSFFDRMPFK----DAASWNTMITGYARRGEMEKARELFYSMMEKNEVSW-----N 190
Query: 187 SLLHIYAACGDTESAHKVFE---------------------------------------- 206
+++ Y CGD E A F+
Sbjct: 191 AMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLV 250
Query: 207 ---SMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYL 263
+M + N RP + L LFR M G+ P+ + S L C+EL AL+LGR++H +
Sbjct: 251 TWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIV 310
Query: 264 LKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXX 323
K+ L ++ + +L+ +Y KCG + +A ++F M++++VV+W +I G A +G
Sbjct: 311 SKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKAL 370
Query: 324 XXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDL 383
K+ P ITFV VL AC+H G+++ G YF M +Y + P+ +HY CMVDL
Sbjct: 371 CLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDL 430
Query: 384 LSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDY 443
L RAG +++A + I++MP +P+A ++ TLLGAC +H ++ L E A LL+L +++ Y
Sbjct: 431 LGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGY 490
Query: 444 VLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVY 503
V L+N+YAS+ RW DV +RK M + V K PGYS +E+ N+V+ F DR HP+ ++
Sbjct: 491 VQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIH 550
Query: 504 AXXXXXXXXXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVM 563
GY P E L ++EEE+KE+ L +HSEK+A+AF + G+ I+V
Sbjct: 551 KKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVF 610
Query: 564 KNLRVCADCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
KNLR+C DCH AIK IS++ REI++RD +RFHHF+ G CSC DYW
Sbjct: 611 KNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 374 bits (960), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/613 (35%), Positives = 321/613 (52%), Gaps = 51/613 (8%)
Query: 45 VLTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMS-YAHLV 103
+++ IS L C + +++KQIH +R G+ + K LI T+ L PM YA V
Sbjct: 48 LVSSLISKLDDCIN-LNQIKQIHGHVLRKGLDQSCYILTK-LIRTLTKLGVPMDPYARRV 105
Query: 104 FTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNV 163
++ N F W +IRGYA A+ Y M + P + T+ LLKA ++
Sbjct: 106 IEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDL 165
Query: 164 REGEALHSVTIK-NGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR----------- 211
G H+ T + GF V+V N+++ +Y C + A KVF+ M +R
Sbjct: 166 NLGRQFHAQTFRLRGF-CFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAA 224
Query: 212 -------------------------------FALNGRPNEALTLFREMSANGVEPDGFTV 240
FA N +P EAL F M +G+ D TV
Sbjct: 225 YARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTV 284
Query: 241 VSLLSACAELGALELGRRVHVYLLKAGLRENLHVV--NALLDLYAKCGSIREAQQVFGEM 298
+SACA+LGA + R K+G + HVV +AL+D+Y+KCG++ EA VF M
Sbjct: 285 AGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSM 344
Query: 299 EERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQ-KLAPGEITFVGVLYACSHCGMLDEG 357
+NV +++++I+GLA +G Q ++ P +TFVG L ACSH G++D+G
Sbjct: 345 NNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQG 404
Query: 358 FDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACT 417
F M + +G+ P +HY CMVDLL R G +++A E I+ M V+P+ +W LLGAC
Sbjct: 405 RQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACR 464
Query: 418 IHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGY 477
IH + + EIA HL +LEP G+Y+LLSN+YAS W V +RK + + G+KKTP
Sbjct: 465 IHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAV 524
Query: 478 S-LVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLADIEEEEKEQ 536
S +V+ ++++F G+ +HP S + GY P +V D+ + K
Sbjct: 525 SWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRL 584
Query: 537 ALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDREIVIRDRSRFH 596
L H+EK+A+AF LL T + I +MKNLR+C DCH ++L S+V + I++RD RFH
Sbjct: 585 ILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFH 644
Query: 597 HFRGGKCSCKDYW 609
HFR G CSC D+W
Sbjct: 645 HFRSGDCSCGDFW 657
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/506 (38%), Positives = 292/506 (57%), Gaps = 17/506 (3%)
Query: 115 WNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTI 174
+N +I GY + A + +R+M + V D+ T L+ + + G +LH +
Sbjct: 124 YNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCV 183
Query: 175 KNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALT 223
K G +S V V NS + +Y CG E+ ++F+ M + ++ NG + L
Sbjct: 184 KGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLE 243
Query: 224 LFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYA 283
L+ +M ++GV PD FT+VS+LS+CA LGA ++G V + G N+ V NA + +YA
Sbjct: 244 LYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYA 303
Query: 284 KCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVG 343
+CG++ +A+ VF M +++VSWT +I ++G G + + P FV
Sbjct: 304 RCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVM 363
Query: 344 VLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQ 403
VL ACSH G+ D+G + FR MK EY + P EHY C+VDLL RAG + +A E+I++MPV+
Sbjct: 364 VLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVE 423
Query: 404 PNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIR 463
P+ +W LLGAC IH ++ + E+A + +++ EP + G YVL+SN+Y+ + + IR
Sbjct: 424 PDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIR 483
Query: 464 KSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTE 523
M + +K PGYS VE RV+ F GDRSH Q+++V+ +
Sbjct: 484 VMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVH-----RMLDELETSVMELAG 538
Query: 524 NVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVY 583
N+ D EE HSE++AIAF +LN+ PGT I V+KNLRVC DCH+ +K +SK+
Sbjct: 539 NMDCD-RGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIV 597
Query: 584 DREIVIRDRSRFHHFRGGKCSCKDYW 609
DR+ V+RD SRFH+F+ G CSCKDYW
Sbjct: 598 DRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 160/352 (45%), Gaps = 22/352 (6%)
Query: 102 LVFTMIRNPNVFT-----WNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKA 156
+V + +RN V WN +R A ++ YR M S PD ++PF+LK+
Sbjct: 3 VVTSFVRNSAVAAVASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKS 62
Query: 157 -VSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE--------- 206
S SL V G+ LH K G E+ FV +L+ +Y CG A KVFE
Sbjct: 63 CASLSLPV-SGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLS 121
Query: 207 ----SMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVY 262
++ + N + +A +FR M GV D T++ L+ C L LGR +H
Sbjct: 122 VCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQ 181
Query: 263 LLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXX 322
+K GL + V+N+ + +Y KCGS+ +++F EM + +++W +I G + NG
Sbjct: 182 CVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDV 241
Query: 323 XXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVD 382
+ P T V VL +C+H G G + ++ E G P + +
Sbjct: 242 LELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHE-VGKLVESNGFVPNVFVSNASIS 300
Query: 383 LLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLK 434
+ +R G + +A MPV+ + V W ++G +HG +G + ++K
Sbjct: 301 MYARCGNLAKARAVFDIMPVK-SLVSWTAMIGCYGMHGMGEIGLMLFDDMIK 351
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/588 (34%), Positives = 320/588 (54%), Gaps = 45/588 (7%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
++++AF G+ + N M L+ + +A + A +F N+ N M Y
Sbjct: 256 EKVYAFIRNSGIEV-NDLMVSALVDMYMKCNA-IDVAKRLFDEYGASNLDLCNAMASNYV 313
Query: 124 ESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVF 183
+ AL + M S V PD + + + S+ N+ G++ H ++NGFES
Sbjct: 314 RQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDN 373
Query: 184 VRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREM---- 228
+ N+L+ +Y C ++A ++F+ M+++ + NG + A F M
Sbjct: 374 ICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKN 433
Query: 229 ----------------------------SANGVEPDGFTVVSLLSACAELGALELGRRVH 260
S GV DG T++S+ SAC LGAL+L + ++
Sbjct: 434 IVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY 493
Query: 261 VYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGX 320
Y+ K G++ ++ + L+D++++CG A +F + R+V +WT I +A+ G
Sbjct: 494 YYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAE 553
Query: 321 XXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCM 380
Q L P + FVG L ACSH G++ +G + F M + +G++P HYGCM
Sbjct: 554 RAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCM 613
Query: 381 VDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHS 440
VDLL RAGL+++A + I++MP++PN VIW +LL AC + G++ + A + L P+ +
Sbjct: 614 VDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERT 673
Query: 441 GDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQ 500
G YVLLSN+YAS RW D+ +R SM + G++K PG S +++ + +EFT GD SHP+
Sbjct: 674 GSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMP 733
Query: 501 DVYAXXXXXXXXXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPI 560
++ A G+VP NVL D++E+EK LS HSEK+A+A+ L+++ GT I
Sbjct: 734 NIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTI 793
Query: 561 RVMKNLRVCADCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDY 608
R++KNLRVC+DCH K SKVY+REI++RD +RFH+ R GKCSC D+
Sbjct: 794 RIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 171/369 (46%), Gaps = 45/369 (12%)
Query: 97 MSYAHLVFTMIRN-PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLK 155
+S+A VF + F +N++IRGYA S A+ + +M S + PD +T+PF L
Sbjct: 83 LSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLS 142
Query: 156 AVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---- 211
A +KS G +H + +K G+ +FV+NSL+H YA CG+ +SA KVF+ M++R
Sbjct: 143 ACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVS 202
Query: 212 -------FALNGRPNEALTL-FREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYL 263
+A +A+ L FR + V P+ T+V ++SACA+L LE G +V+ ++
Sbjct: 203 WTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI 262
Query: 264 LKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXX 323
+G+ N +V+AL+D+Y KC +I A+++F E N+ + G
Sbjct: 263 RNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREAL 322
Query: 324 XXXXXXXXQKLAPGEITFVGVLYACS-----------HCGMLDEGFDYFR---------- 362
+ P I+ + + +CS H +L GF+ +
Sbjct: 323 GVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMY 382
Query: 363 ----RMKEEYGIAPRIEH-----YGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLL 413
R + I R+ + + +V G V A+E + MP + N V W T++
Sbjct: 383 MKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMP-EKNIVSWNTII 441
Query: 414 GACTIHGHL 422
+ G L
Sbjct: 442 SG-LVQGSL 449
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 167/384 (43%), Gaps = 53/384 (13%)
Query: 53 LQYCASSKHKLK--QIHAFSIRHGVPLHNPDMG-KHLIFTIVSLSAPMSYAHLVFTMIRN 109
L CA S+ K QIH ++ G + D+ ++ + + + A VF +
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMG---YAKDLFVQNSLVHFYAECGELDSARKVFDEMSE 197
Query: 110 PNVFTWNTMIRGYAESQDPKPALH-FYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
NV +W +MI GYA K A+ F+R + V P++ T ++ A +K ++ GE
Sbjct: 198 RNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEK 257
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE-----------SMTDRFALNGR 217
+++ +G E + ++L+ +Y C + A ++F+ +M + G
Sbjct: 258 VYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGL 317
Query: 218 PNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNA 277
EAL +F M +GV PD +++S +S+C++L + G+ H Y+L+ G ++ NA
Sbjct: 318 TREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNA 377
Query: 278 LLDLYAKC-------------------------------GSIREAQQVFGEMEERNVVSW 306
L+D+Y KC G + A + F M E+N+VSW
Sbjct: 378 LIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSW 437
Query: 307 TTLIVGLAVNG--FGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRM 364
T+I GL V G F + + +T + + AC H G LD +
Sbjct: 438 NTIISGL-VQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLA-KWIYYY 495
Query: 365 KEEYGIAPRIEHYGCMVDLLSRAG 388
E+ GI + +VD+ SR G
Sbjct: 496 IEKNGIQLDVRLGTTLVDMFSRCG 519
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 152/348 (43%), Gaps = 61/348 (17%)
Query: 147 THTYPFLL------KAVSKSL----NVREGEALHSVTIKNGFESLVFVRNSLLHIYAACG 196
T T P LL KA SL + E + H K G ++ V L+ G
Sbjct: 19 TTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELG 78
Query: 197 DTES---AHKVFE------------SMTDRFALNGRPNEALTLFREMSANGVEPDGFTVV 241
ES A +VFE S+ +A +G NEA+ LF M +G+ PD +T
Sbjct: 79 TRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFP 138
Query: 242 SLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEER 301
LSACA+ A G ++H ++K G ++L V N+L+ YA+CG + A++VF EM ER
Sbjct: 139 FGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSER 198
Query: 302 NVVSWTTLIVGLAVNGFGXXXXXX-XXXXXXQKLAPGEITFVGVLYACSHCGMLDEG--- 357
NVVSWT++I G A F +++ P +T V V+ AC+ L+ G
Sbjct: 199 NVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKV 258
Query: 358 ----------------------------FDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGL 389
D +R+ +EYG A ++ M R GL
Sbjct: 259 YAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYG-ASNLDLCNAMASNYVRQGL 317
Query: 390 VKQA---YEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLK 434
++A + + + V+P+ + + + +C+ ++ G+ ++L+
Sbjct: 318 TREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/581 (35%), Positives = 322/581 (55%), Gaps = 29/581 (4%)
Query: 51 SLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNP 110
+++Q C S ++KQ+ + + G + + L +S +S+A +F I P
Sbjct: 8 TMIQKCVSFS-QIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKP 66
Query: 111 NVFTWNTMIRGYAESQDPKPALHFYRQM------TMSCVEPDTHTYPFLLKAVSKSLNVR 164
WN +IRG+A S P A +YR M + + D T F LKA +++L
Sbjct: 67 LTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSS 126
Query: 165 EGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FA 213
+ LH + G + + +LL Y+ GD SA+K+F+ M R
Sbjct: 127 AMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLV 186
Query: 214 LNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRV-HVYLLKAGLRENL 272
R +EA+ L++ M G+ TVV+ L AC+ LG ++ G + H Y +N+
Sbjct: 187 SGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS-----NDNV 241
Query: 273 HVVNALLDLYAKCGSIREAQQVFGEME-ERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXX 331
V NA +D+Y+KCG + +A QVF + +++VV+W T+I G AV+G
Sbjct: 242 IVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLED 301
Query: 332 QKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVK 391
+ P +++++ L AC H G+++ G F M + G+ ++HYGC+VDLLSRAG ++
Sbjct: 302 NGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLR 360
Query: 392 QAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYA 451
+A++ I +M + P+ V+W++LLGA I+ + + EIA + ++ + GD+VLLSN+YA
Sbjct: 361 EAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYA 420
Query: 452 SERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXX 511
++ RW DV +R M VKK PG S +E ++EF D+SH Q +++Y
Sbjct: 421 AQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRF 480
Query: 512 XXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAF--MLLNTAP-GTPIRVMKNLRV 568
GYV +T VL DI EEEKE AL YHSEK+A+A+ M+++ A +P+RV+ NLR+
Sbjct: 481 KIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRI 540
Query: 569 CADCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
C DCH+ K ISK+Y REI++RDR RFH F+ G CSC+D+W
Sbjct: 541 CGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/522 (35%), Positives = 289/522 (55%), Gaps = 12/522 (2%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMT-MSCVEPDTHTYPFLLKAVS 158
A +F + + ++W M+ GY + P+ AL Y M + P+ T + A +
Sbjct: 170 ARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAA 229
Query: 159 KSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE-----------S 207
+R G+ +H ++ G +S + +SL+ +Y CG + A +F+ S
Sbjct: 230 AVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTS 289
Query: 208 MTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAG 267
M DR+ + R E +LF E+ + P+ +T +L+ACA+L ELG++VH Y+ + G
Sbjct: 290 MIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVG 349
Query: 268 LRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXX 327
++L+D+Y KCG+I A+ V + ++VSWT+LI G A NG
Sbjct: 350 FDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFD 409
Query: 328 XXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRA 387
P +TFV VL AC+H G++++G ++F + E++ ++ +HY C+VDLL+R+
Sbjct: 410 LLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARS 469
Query: 388 GLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLS 447
G +Q I MP++P+ +W ++LG C+ +G++ L E A L K+EP++ YV ++
Sbjct: 470 GRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMA 529
Query: 448 NLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXX 507
N+YA+ +W + +RK M + GV K PG S E+ + + F D SHP +
Sbjct: 530 NIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLR 589
Query: 508 XXXXXXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLR 567
GYVP T VL D+E+E+KE+ L YHSEK+A+AF +L+T GT I+V KNLR
Sbjct: 590 ELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLR 649
Query: 568 VCADCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
C DCH AIK IS + R+I +RD +RFH F G+CSC DYW
Sbjct: 650 SCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 142/328 (43%), Gaps = 45/328 (13%)
Query: 137 QMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACG 196
Q+ +P TY L++ S++ + EG+ +H +GF + + N LL +YA CG
Sbjct: 75 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134
Query: 197 DTESAHKVFESMTDR-----------FALNGRPNEALTLFREMSAN-------------- 231
A KVF+ M +R +A G EA LF EM+
Sbjct: 135 SLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVK 194
Query: 232 ------------------GVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
P+ FTV ++A A + + G+ +H ++++AGL +
Sbjct: 195 KDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEV 254
Query: 274 VVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQK 333
+ ++L+D+Y KCG I EA+ +F ++ E++VVSWT++I +
Sbjct: 255 LWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSC 314
Query: 334 LAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQA 393
P E TF GVL AC+ + G M G P +VD+ ++ G ++ A
Sbjct: 315 ERPNEYTFAGVLNACADLTTEELGKQVHGYMT-RVGFDPYSFASSSLVDMYTKCGNIESA 373
Query: 394 YEYIQNMPVQPNAVIWRTLLGACTIHGH 421
+ P +P+ V W +L+G C +G
Sbjct: 374 KHVVDGCP-KPDLVSWTSLIGGCAQNGQ 400
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/450 (39%), Positives = 277/450 (61%), Gaps = 19/450 (4%)
Query: 172 VTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNE 220
+++ G ++ + SL+ I G++ A KV + +D+ + N + E
Sbjct: 92 LSLSPGVCNINLIIESLMKI----GESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEE 147
Query: 221 ALTLFREM-SANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALL 279
AL + M S ++P+ F+ S L+ACA LG L + VH ++ +G+ N + +AL+
Sbjct: 148 ALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALV 207
Query: 280 DLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEI 339
D+YAKCG I +++VF ++ +V W +I G A +G + ++P I
Sbjct: 208 DVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSI 267
Query: 340 TFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQN 399
TF+G+L CSHCG+L+EG +YF M + I P++EHYG MVDLL RAG VK+AYE I++
Sbjct: 268 TFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIES 327
Query: 400 MPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDV 459
MP++P+ VIWR+LL + + + LGEIA +L K + SGDYVLLSN+Y+S ++W
Sbjct: 328 MPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAK---SGDYVLLSNIYSSTKKWESA 384
Query: 460 QTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYV 519
Q +R+ M ++G++K G S +E G ++ F GD SH +++ +Y G+V
Sbjct: 385 QKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFV 444
Query: 520 PRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLI 579
T+ VL D+ EEEKE+ L+YHSEK+A+A+++L ++PGT IR+ KN+R+C+DCH IK +
Sbjct: 445 SDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAV 504
Query: 580 SKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
SK+ +R I++RDR RFH F G CSC+DYW
Sbjct: 505 SKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 534
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 113/225 (50%), Gaps = 14/225 (6%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQM-TMSCVEPDTHTYPFLLKAVS 158
A V + NV TWN MI GY + + AL + M + + ++P+ ++ L A +
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 159 KSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFES----------- 207
+ ++ + +HS+ I +G E + ++L+ +YA CGD ++ +VF S
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 208 MTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKA- 266
M FA +G EA+ +F EM A V PD T + LL+ C+ G LE G+ + +
Sbjct: 237 MITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRF 296
Query: 267 GLRENLHVVNALLDLYAKCGSIREAQQVFGEME-ERNVVSWTTLI 310
++ L A++DL + G ++EA ++ M E +VV W +L+
Sbjct: 297 SIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 219/624 (35%), Positives = 332/624 (53%), Gaps = 64/624 (10%)
Query: 48 KCIS------LLQYCA--SSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSY 99
KC+S LL++CA S K++HA G+ + +F + S M
Sbjct: 2 KCLSYQKVRLLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVT 61
Query: 100 AHLVFTMI--RNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAV 157
A +F I + W T++ ++ ++ + +M VE D + L
Sbjct: 62 AQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVC 121
Query: 158 SKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACG--------------------- 196
+K ++ + H V +K G + V V N+L+ +Y CG
Sbjct: 122 AKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWT 181
Query: 197 ---DT-------ESAHKVFESMTDRFALN-----------GRPNEALTLFREMSAN-GVE 234
DT E +VF M +R A+ G E L L EM G
Sbjct: 182 VVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHG 241
Query: 235 PDGFTVVSLLSACAELGALELGRRVHVYLLKAGLR-------ENLHVVNALLDLYAKCGS 287
+ T+ S+LSACA+ G L +GR VHVY LK + +++ V AL+D+YAKCG+
Sbjct: 242 LNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGN 301
Query: 288 IREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYA 347
I + VF M +RNVV+W L GLA++G G +++ P ++TF VL A
Sbjct: 302 IDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMI-REVKPDDLTFTAVLSA 360
Query: 348 CSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAV 407
CSH G++DEG+ F ++ YG+ P+++HY CMVDLL RAGL+++A ++ MPV PN V
Sbjct: 361 CSHSGIVDEGWRCFHSLRF-YGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEV 419
Query: 408 IWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSML 467
+ +LLG+C++HG + + E + L+++ P ++ +L+SN+Y +E R +R S+
Sbjct: 420 VLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLR 479
Query: 468 QDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLA 527
+ G++K PG S + + + V+ F+ GDRSHP+++++Y GYVP +++
Sbjct: 480 KRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVS 539
Query: 528 DIEE--EEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDR 585
E EEKEQAL HSEK+A+ F LL T P TP+ V KNLR+C DCH A+K++SKVYDR
Sbjct: 540 HSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDR 599
Query: 586 EIVIRDRSRFHHFRGGKCSCKDYW 609
EI+IRDR+RFH F+GG CSC DYW
Sbjct: 600 EIIIRDRNRFHQFKGGSCSCSDYW 623
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/551 (36%), Positives = 284/551 (51%), Gaps = 44/551 (7%)
Query: 102 LVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSL 161
L+ M N + +N MI GY + AL R+M S +E D TYP +++A + +
Sbjct: 241 LLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAG 300
Query: 162 NVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------- 211
++ G+ +H+ ++ S F NSL+ +Y CG + A +FE M +
Sbjct: 301 LLQLGKQVHAYVLRREDFSFHF-DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLS 359
Query: 212 --------------------------------FALNGRPNEALTLFREMSANGVEPDGFT 239
A NG E L LF M G EP +
Sbjct: 360 GYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYA 419
Query: 240 VVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEME 299
+ +CA LGA G++ H LLK G +L NAL+ +YAKCG + EA+QVF M
Sbjct: 420 FSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP 479
Query: 300 ERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFD 359
+ VSW LI L +G G + + P IT + VL ACSH G++D+G
Sbjct: 480 CLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRK 539
Query: 360 YFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIH 419
YF M+ Y I P +HY ++DLL R+G A I+++P +P A IW LL C +H
Sbjct: 540 YFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVH 599
Query: 420 GHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSL 479
G++ LG IA L L P+H G Y+LLSN++A+ +W +V +RK M GVKK S
Sbjct: 600 GNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSW 659
Query: 480 VELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLADIEEE-EKEQAL 538
+E+ +V+ F + D SHP+++ VY GYVP T VL D+E + KE L
Sbjct: 660 IEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDML 719
Query: 539 SYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDREIVIRDRSRFHHF 598
+ HSEK+A+AF L+ PGT IR+ KNLR C DCH + +S V R+I++RDR RFHHF
Sbjct: 720 TTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHF 779
Query: 599 RGGKCSCKDYW 609
R G+CSC ++W
Sbjct: 780 RNGECSCGNFW 790
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 111/241 (46%), Gaps = 21/241 (8%)
Query: 94 SAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFL 153
S + A L+F ++ N+ +W MI G AE+ + L + M EP + +
Sbjct: 364 SGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGA 423
Query: 154 LKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESM--TDR 211
+K+ + G+ H+ +K GF+S + N+L+ +YA CG E A +VF +M D
Sbjct: 424 IKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDS 483
Query: 212 FALN---------GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVH-- 260
+ N G EA+ ++ EM G+ PD T++++L+AC+ G ++ GR+
Sbjct: 484 VSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDS 543
Query: 261 ---VYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVS-WTTLIVGLAVN 316
VY + G L+DL + G +A+ V + + W L+ G V+
Sbjct: 544 METVYRIPPGADHYAR----LIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVH 599
Query: 317 G 317
G
Sbjct: 600 G 600
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 120/310 (38%), Gaps = 68/310 (21%)
Query: 184 VRNSLLHIYAACGDTESAHKVFE-------------SMTDRFALNGRPNEALTLFREMSA 230
R +++ Y A GD A VFE +M F+ N A+ LF +M
Sbjct: 82 ARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKH 141
Query: 231 NGVEPDGFTVVSLLSACAELGALELG-RRVHVYLLKAGLRENLHVVNALLDLYAKCGS-- 287
G +PD FT S+L+ A + E + H LK+G V NAL+ +Y+KC S
Sbjct: 142 EGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSP 201
Query: 288 --IREAQQVFGEMEERNVVSWTTLIVGLAVN----------------------------- 316
+ A++VF E+ E++ SWTT++ G N
Sbjct: 202 SLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGY 261
Query: 317 ---GFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPR 373
GF + E T+ V+ AC+ G+L G K+ + R
Sbjct: 262 VNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLG-------KQVHAYVLR 314
Query: 374 IEHYG-----CMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIA 428
E + +V L + G +A + MP + + V W LL G++S G I
Sbjct: 315 REDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLS-----GYVSSGHIG 368
Query: 429 RSHLLKLEPK 438
+ L+ E K
Sbjct: 369 EAKLIFKEMK 378
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/620 (34%), Positives = 323/620 (52%), Gaps = 62/620 (10%)
Query: 42 LPHVLTKCISLLQYCASSKH--KLKQIHAFSIRHGV----PLHNPDMGKHLIFTIVSLSA 95
+PH L + LQ CA ++ K +HA ++ G+ PL N + +
Sbjct: 3 IPHYLHQ----LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANT------LVNVYGKCG 52
Query: 96 PMSYAHLVFTMIRNPNVFTWNTMIRGYAESQ-DPKPALHFYRQMTMSCVEPDTHTYPFLL 154
S+A VF + + + W +++ ++ K F + S + PD + L+
Sbjct: 53 AASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALV 112
Query: 155 KAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFES------- 207
KA + ++ G +H I + + + V++SL+ +YA CG SA VF+S
Sbjct: 113 KACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTI 172
Query: 208 ----MTDRFALNGRPNEALTLFREM-----------------SANGVEP----------- 235
M +A +GR EAL LFR + S G+E
Sbjct: 173 SWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRER 232
Query: 236 ----DGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREA 291
D + S++ ACA L A GR+VH ++ G + + NAL+D+YAKC + A
Sbjct: 233 VDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAA 292
Query: 292 QQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHC 351
+ +F M R+VVSWT+LIVG+A +G + P E+TFVG++YACSH
Sbjct: 293 KDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHV 352
Query: 352 GMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRT 411
G +++G + F+ M ++YGI P ++HY C++DLL R+GL+ +A I MP P+ W
Sbjct: 353 GFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAA 412
Query: 412 LLGACTIHGHLSLGEIARSHLLK-LEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDG 470
LL AC G +G HL+ + K Y+LLSN+YAS W V R+ + +
Sbjct: 413 LLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEME 472
Query: 471 VKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXX-XGYVPRTENVLADI 529
V+K PG+S VE+ F G+ SHP +D++ GYVP T +L D+
Sbjct: 473 VRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDM 532
Query: 530 EEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDREIVI 589
+E+EKE+ L +HSE+ A+A+ LL PGTPIR++KNLRVC DCH+ +K IS++ +REI++
Sbjct: 533 DEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIV 592
Query: 590 RDRSRFHHFRGGKCSCKDYW 609
RD +R+HHF+GGKCSC D+W
Sbjct: 593 RDATRYHHFKGGKCSCNDFW 612
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/543 (35%), Positives = 300/543 (55%), Gaps = 13/543 (2%)
Query: 79 NPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQM 138
+P +G L+ L MS A VF + +V W+ MI + ++ A+ + +M
Sbjct: 281 DPRVGVGLLQLYTQL-GDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM 339
Query: 139 TMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDT 198
+ V P+ T +L + GE LH + +K GF+ ++V N+L+ +YA C
Sbjct: 340 REAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKM 399
Query: 199 ESAHKVFESMTDRFALN-----------GRPNEALTLFREMSANGVEPDGFTVVSLLSAC 247
++A K+F ++ + ++ G +A ++FRE N V T S L AC
Sbjct: 400 DTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGAC 459
Query: 248 AELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWT 307
A L +++LG +VH +K + + V N+L+D+YAKCG I+ AQ VF EME +V SW
Sbjct: 460 ASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWN 519
Query: 308 TLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEE 367
LI G + +G G + P +TF+GVL CS+ G++D+G + F M +
Sbjct: 520 ALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRD 579
Query: 368 YGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEI 427
+GI P +EHY CMV LL R+G + +A + I+ +P +P+ +IWR +L A +
Sbjct: 580 HGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARR 639
Query: 428 ARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVY 487
+ +LK+ PK YVL+SN+YA ++W +V +IRKSM + GVKK PG S +E V+
Sbjct: 640 SAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVH 699
Query: 488 EFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAI 547
F++G HP + + GYVP VL D+++EEK++ L HSE++A+
Sbjct: 700 YFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLAL 759
Query: 548 AFMLLNT-APGTPIRVMKNLRVCADCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCK 606
A+ L+ + I +MKNLR+C+DCH A+K+IS + R++VIRD +RFHHF G CSC
Sbjct: 760 AYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCG 819
Query: 607 DYW 609
D+W
Sbjct: 820 DHW 822
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 171/390 (43%), Gaps = 18/390 (4%)
Query: 43 PHVLTKCISLLQYCASSKHKL-KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAH 101
PHV T + L + + K ++ +H+ ++ G N +G LI S+ + A
Sbjct: 146 PHVFTSFLKL--FVSLDKAEICPWLHSPIVKLGYD-SNAFVGAALI-NAYSVCGSVDSAR 201
Query: 102 LVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSL 161
VF I ++ W ++ Y E+ + +L M M+ P+ +T+ LKA
Sbjct: 202 TVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLG 261
Query: 162 NVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTD----------- 210
+ +H +K + V LL +Y GD A KVF M
Sbjct: 262 AFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIA 321
Query: 211 RFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRE 270
RF NG NEA+ LF M V P+ FT+ S+L+ CA LG ++H ++K G
Sbjct: 322 RFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDL 381
Query: 271 NLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXX 330
+++V NAL+D+YAKC + A ++F E+ +N VSW T+IVG G G
Sbjct: 382 DIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREAL 441
Query: 331 XQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLV 390
+++ E+TF L AC+ +D G + + A ++ ++D+ ++ G +
Sbjct: 442 RNQVSVTEVTFSSALGACASLASMDLGVQ-VHGLAIKTNNAKKVAVSNSLIDMYAKCGDI 500
Query: 391 KQAYEYIQNMPVQPNAVIWRTLLGACTIHG 420
K A M + W L+ + HG
Sbjct: 501 KFAQSVFNEMET-IDVASWNALISGYSTHG 529
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 145/341 (42%), Gaps = 26/341 (7%)
Query: 103 VFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLN 162
+F + N ++ T+ +GYA QDP + Y ++ E + H + LK
Sbjct: 106 LFDEMPERNNVSFVTLAQGYA-CQDP---IGLYSRLHREGHELNPHVFTSFLKLFVSLDK 161
Query: 163 VREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR----------- 211
LHS +K G++S FV +L++ Y+ CG +SA VFE + +
Sbjct: 162 AEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSC 221
Query: 212 FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLREN 271
+ NG ++L L M G P+ +T + L A LGA + + VH +LK +
Sbjct: 222 YVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLD 281
Query: 272 LHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXX 331
V LL LY + G + +A +VF EM + +VV W+ +I NGF
Sbjct: 282 PRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMRE 341
Query: 332 QKLAPGEITFVGVLYACS--HCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGL 389
+ P E T +L C+ C L E + + G I ++D+ ++
Sbjct: 342 AFVVPNEFTLSSILNGCAIGKCSGLGE---QLHGLVVKVGFDLDIYVSNALIDVYAKCEK 398
Query: 390 VKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARS 430
+ A + + + N V W T+ I G+ +LGE ++
Sbjct: 399 MDTAVKLFAELSSK-NEVSWNTV-----IVGYENLGEGGKA 433
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 115/281 (40%), Gaps = 19/281 (6%)
Query: 146 DTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVF 205
D+H Y +L+ + + +A+H +K G +F N LL+ Y G + A +F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 206 ESMTDR-------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRR 258
+ M +R A + + L+ + G E + S L L E+
Sbjct: 108 DEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPW 167
Query: 259 VHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGF 318
+H ++K G N V AL++ Y+ CGS+ A+ VF + +++V W ++ NG+
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 319 GXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRR-----MKEEYGIAPR 373
P TF L A G FD+ + +K Y + PR
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLG----AFDFAKGVHGQILKTCYVLDPR 283
Query: 374 IEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLG 414
+ G ++ L ++ G + A++ MP + + V W ++
Sbjct: 284 V-GVG-LLQLYTQLGDMSDAFKVFNEMP-KNDVVPWSFMIA 321
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 359 bits (922), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 194/557 (34%), Positives = 304/557 (54%), Gaps = 13/557 (2%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
KQ H +++G+ H + ++ + + SL + A V + ++ +++ + GY
Sbjct: 156 KQFHGCFLKYGLISH--EFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYL 213
Query: 124 ESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVF 183
E K L R+ + TY L+ S ++ +HS ++ GF + V
Sbjct: 214 ECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVE 273
Query: 184 VRNSLLHIYAACGDTESAHKVFE-----------SMTDRFALNGRPNEALTLFREMSANG 232
+L+++Y CG A +VF+ ++ D + + EAL LF +M
Sbjct: 274 ACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKE 333
Query: 233 VEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQ 292
V P+ +T LL++ AEL L+ G +H +LK+G R ++ V NAL+++YAK GSI +A+
Sbjct: 334 VPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDAR 393
Query: 293 QVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCG 352
+ F M R++V+W T+I G + +G G P ITF+GVL ACSH G
Sbjct: 394 KAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIG 453
Query: 353 MLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTL 412
+++G YF ++ +++ + P I+HY C+V LLS+AG+ K A ++++ P++ + V WRTL
Sbjct: 454 FVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTL 513
Query: 413 LGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVK 472
L AC + + LG+ + ++ P SG YVLLSN++A R W V +R M GVK
Sbjct: 514 LNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVK 573
Query: 473 KTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLADIEEE 532
K PG S + + N+ + F D HP+ +YA GY P D++EE
Sbjct: 574 KEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEE 633
Query: 533 EKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDREIVIRDR 592
++E LSYHSEK+A+A+ L+ T +P+ V KN+R+C DCH AIKLISK+ R IVIRD
Sbjct: 634 QREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDS 693
Query: 593 SRFHHFRGGKCSCKDYW 609
+RFHHF G+CSC DYW
Sbjct: 694 NRFHHFLDGQCSCCDYW 710
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 174/411 (42%), Gaps = 47/411 (11%)
Query: 39 ENPLPHVLTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMS 98
+ P P + + LL+ CA+S + +R G +H HLI T S A +
Sbjct: 26 KTPFP--IDRLNELLKVCANSSY---------LRIGESIH-----AHLIVTNQSSRAEDA 69
Query: 99 Y-----------------AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMS 141
Y A +F ++ NV +W M++GY S L ++ M S
Sbjct: 70 YQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFS 129
Query: 142 C-VEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAAC-GDTE 199
P+ + K+ S S + EG+ H +K G S FVRN+L+++Y+ C G+ E
Sbjct: 130 GESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGE 189
Query: 200 SAH----------KVFESMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAE 249
+ VF S + G E L + R+ + + T +S L +
Sbjct: 190 AIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSN 249
Query: 250 LGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTL 309
L L L +VH +++ G + AL+++Y KCG + AQ+VF + +N+ TT+
Sbjct: 250 LRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTI 309
Query: 310 IVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYG 369
+ + +++ P E TF +L + + +L +G D + + G
Sbjct: 310 MDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQG-DLLHGLVLKSG 368
Query: 370 IAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHG 420
+ +V++ +++G ++ A + M + + V W T++ C+ HG
Sbjct: 369 YRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHHG 418
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 359 bits (921), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 192/560 (34%), Positives = 301/560 (53%), Gaps = 21/560 (3%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
K + + S RHG +G L+ + L + A +F + ++ +WN++I GY+
Sbjct: 56 KVVKSVSYRHGF------IGDQLVGCYLRLGHDVC-AEKLFDEMPERDLVSWNSLISGYS 108
Query: 124 ESQDPKPALHFYRQMTMSCV--EPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESL 181
+M +S V P+ T+ ++ A + EG +H + +K G
Sbjct: 109 GRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEE 168
Query: 182 VFVRNSLLHIYAACGDTESAHKVFESMTDRFAL-----------NGRPNEALTLFREMSA 230
V V N+ ++ Y GD S+ K+FE ++ + + NG + L F
Sbjct: 169 VKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRR 228
Query: 231 NGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIRE 290
G EPD T +++L +C ++G + L + +H ++ G N + ALLDLY+K G + +
Sbjct: 229 VGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLED 288
Query: 291 AQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSH 350
+ VF E+ + ++WT ++ A +GFG ++P +TF +L ACSH
Sbjct: 289 SSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSH 348
Query: 351 CGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWR 410
G+++EG YF M + Y I PR++HY CMVDLL R+GL++ AY I+ MP++P++ +W
Sbjct: 349 SGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWG 408
Query: 411 TLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDG 470
LLGAC ++ LG A L +LEP+ +YV+LSN+Y++ W D IR M Q G
Sbjct: 409 ALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKG 468
Query: 471 VKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAX-XXXXXXXXXXXGYVPRTENVLADI 529
+ + G S +E GN++++F +GD SHP+S+ + GY +TE VL D+
Sbjct: 469 LVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDV 528
Query: 530 EEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDREIVI 589
E+ KE+ ++ HSEK+A+AF LL +P PI + KNLR+C DCH K IS + R I+I
Sbjct: 529 GEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIII 588
Query: 590 RDRSRFHHFRGGKCSCKDYW 609
RD RFHHF G CSC DYW
Sbjct: 589 RDSKRFHHFLDGSCSCSDYW 608
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 123/286 (43%), Gaps = 25/286 (8%)
Query: 153 LLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR- 211
L+ AV +++ LH +K+ F+ + L+ Y G A K+F+ M +R
Sbjct: 37 LIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERD 96
Query: 212 ----------FALNGRPNEALTLFREM--SANGVEPDGFTVVSLLSACAELGALELGRRV 259
++ G + + M S G P+ T +S++SAC G+ E GR +
Sbjct: 97 LVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCI 156
Query: 260 HVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFG 319
H ++K G+ E + VVNA ++ Y K G + + ++F ++ +N+VSW T+IV NG
Sbjct: 157 HGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLA 216
Query: 320 XXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLD-----EGFDYFRRMKEEYGIAPRI 374
P + TF+ VL +C G++ G F I
Sbjct: 217 EKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITT-- 274
Query: 375 EHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHG 420
++DL S+ G ++ + + P+++ W +L A HG
Sbjct: 275 ----ALLDLYSKLGRLEDSSTVFHEI-TSPDSMAWTAMLAAYATHG 315
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 88/177 (49%), Gaps = 4/177 (2%)
Query: 239 TVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEM 298
V SL++A ++EL R +H ++K+ + + + L+ Y + G A+++F EM
Sbjct: 33 NVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEM 92
Query: 299 EERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLA--PGEITFVGVLYACSHCGMLDE 356
ER++VSW +LI G + G+ ++ P E+TF+ ++ AC + G +E
Sbjct: 93 PERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEE 152
Query: 357 GFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLL 413
G + ++G+ ++ ++ + G + + + +++ ++ N V W T++
Sbjct: 153 G-RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIK-NLVSWNTMI 207
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 350 bits (899), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 195/567 (34%), Positives = 299/567 (52%), Gaps = 22/567 (3%)
Query: 58 SSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNT 117
S + + ++ H ++ G+ + N +G L+ V A LV + +V
Sbjct: 179 SLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTRE-AKLVLDRVEEKDVVLITA 237
Query: 118 MIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNG 177
+I GY++ + A+ ++ M + V+P+ +TY +L + ++ G+ +H + +K+G
Sbjct: 238 LIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSG 297
Query: 178 FESLVFVRNSLLHIYAACGDTESAHKVFE-----------SMTDRFALNGRPNEALTLFR 226
FES + + SLL +Y C + + +VF+ S+ NGR AL FR
Sbjct: 298 FESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFR 357
Query: 227 EMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCG 286
+M + ++P+ FT+ S L C+ L E GR++H + K G + + + L+DLY KCG
Sbjct: 358 KMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCG 417
Query: 287 SIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLY 346
A+ VF + E +V+S T+I A NGFG L P ++T + VL
Sbjct: 418 CSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLL 477
Query: 347 ACSHCGMLDEG---FDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQ 403
AC++ +++EG FD FR+ K I +HY CMVDLL RAG +++A E + +
Sbjct: 478 ACNNSRLVEEGCELFDSFRKDK----IMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVIN 532
Query: 404 PNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIR 463
P+ V+WRTLL AC +H + + E +L++EP G +L+SNLYAS +W V ++
Sbjct: 533 PDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMK 592
Query: 464 KSMLQDGVKKTPGYSLVELGNRVYEFTMGDR-SHPQSQDVYAXXXXXXXXXXXXGYVPRT 522
M +KK P S VE+ + F GD SHP S+ + GYV
Sbjct: 593 SKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDK 652
Query: 523 ENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKV 582
V D+EE KE++L HSEK+AIAF + G+ IR++KNLRVC DCH IK++S+V
Sbjct: 653 SCVFQDMEETAKERSLHQHSEKLAIAFAVWRNVGGS-IRILKNLRVCVDCHSWIKIVSRV 711
Query: 583 YDREIVIRDRSRFHHFRGGKCSCKDYW 609
REI+ RD RFHHFR G CSC DYW
Sbjct: 712 MKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 181/418 (43%), Gaps = 60/418 (14%)
Query: 52 LLQYCASSKH--KLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRN 109
LL+ C + +K I A ++ G P G L+ + + YA VF +
Sbjct: 71 LLRQCIDERSISGIKTIQAHMLKSGFPAEIS--GSKLVDASLK-CGDIDYARQVFDGMSE 127
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
++ TWN++I + + K A+ YR M + V PD +T + KA S +E +
Sbjct: 128 RHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRS 187
Query: 170 HSVTIKNGFE-SLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGR 217
H + + G E S VFV ++L+ +Y G T A V + + ++ ++ G
Sbjct: 188 HGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGE 247
Query: 218 PNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNA 277
EA+ F+ M V+P+ +T S+L +C L + G+ +H ++K+G L +
Sbjct: 248 DTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTS 307
Query: 278 LLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPG 337
LL +Y +C + ++ +VF +E N VSWT+LI GL NG + P
Sbjct: 308 LLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPN 367
Query: 338 EITFVGVLYACSHCGMLDE-----------GFDYFRRMKEEYGIAPRIEHYG-------- 378
T L CS+ M +E GFD +++Y + I+ YG
Sbjct: 368 SFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFD-----RDKYAGSGLIDLYGKCGCSDMA 422
Query: 379 -------CMVDLLS---------RAGLVKQA---YEYIQNMPVQPNAVIWRTLLGACT 417
VD++S + G ++A +E + N+ +QPN V ++L AC
Sbjct: 423 RLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACN 480
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 350 bits (899), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 201/578 (34%), Positives = 308/578 (53%), Gaps = 22/578 (3%)
Query: 52 LLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVF-TMIRNP 110
L+ C +KQ+H FS+ G ++ + T S + A VF M
Sbjct: 146 LIAACCDRVDLIKQLHCFSVSGGFDSYSSV--NNAFVTYYSKGGLLREAVSVFYGMDELR 203
Query: 111 NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALH 170
+ +WN+MI Y + ++ AL Y++M + D T +L A++ ++ G H
Sbjct: 204 DEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFH 263
Query: 171 SVTIKNGFESLVFVRNSLLHIYAACGDTE---SAHKVFE-----------SMTDRFALNG 216
IK GF V + L+ Y+ CG + + KVF+ +M +++N
Sbjct: 264 GKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNE 323
Query: 217 R-PNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLREN-LHV 274
EA+ FR+M G PD + V + SAC+ L + +++H +K+ + N + V
Sbjct: 324 ELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISV 383
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKL 334
NAL+ LY K G++++A+ VF M E N VS+ +I G A +G G +
Sbjct: 384 NNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGI 443
Query: 335 APGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAY 394
AP +ITFV VL AC+HCG +DEG +YF MKE + I P EHY CM+DLL RAG +++A
Sbjct: 444 APNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAE 503
Query: 395 EYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASER 454
+I MP +P +V W LLGAC H +++L E A + L+ ++P + YV+L+N+YA R
Sbjct: 504 RFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADAR 563
Query: 455 RWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXX 514
+W ++ ++RKSM ++K PG S +E+ + + F D SHP ++V
Sbjct: 564 KWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMK 623
Query: 515 XXGYVPRTENVLADIEEEEKEQA---LSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCAD 571
GYV + + +E + L +HSEK+A+AF L++T G + V+KNLR+C D
Sbjct: 624 KVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGD 683
Query: 572 CHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
CH AIK +S V REI++RD RFH F+ GKCSC DYW
Sbjct: 684 CHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 187/406 (46%), Gaps = 49/406 (12%)
Query: 40 NPLPHVLTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSY 99
N ++ +KC L Y ++ + ++ + FS V + D H+
Sbjct: 47 NHFVNLYSKC-GRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHI------------- 92
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A +F I P+ ++NT+I GYA++++ A+ +++M E D T L+ A
Sbjct: 93 ARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCD 152
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVF---ESMTDRFALN- 215
+++ + LH ++ GF+S V N+ + Y+ G A VF + + D + N
Sbjct: 153 RVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNS 210
Query: 216 -----GRPNE---ALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAG 267
G+ E AL L++EM G + D FT+ S+L+A L L GR+ H L+KAG
Sbjct: 211 MIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAG 270
Query: 268 LRENLHVVNALLDLYAKCG---SIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXX 324
+N HV + L+D Y+KCG + ++++VF E+ ++V W T+I G ++N
Sbjct: 271 FHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNE-ELSEEA 329
Query: 325 XXXXXXXQKLA--PGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIA-------PRIE 375
Q++ P + +FV V ACS+ + K+ +G+A RI
Sbjct: 330 VKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQ-------CKQIHGLAIKSHIPSNRIS 382
Query: 376 HYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGH 421
++ L ++G ++ A MP + NAV + ++ HGH
Sbjct: 383 VNNALISLYYKSGNLQDARWVFDRMP-ELNAVSFNCMIKGYAQHGH 427
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 345 bits (886), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 198/580 (34%), Positives = 311/580 (53%), Gaps = 19/580 (3%)
Query: 40 NPLPHVLTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSA-PMS 98
+P LT IS + + + IHA+ I G + D+ T + L+A
Sbjct: 294 DPDLMTLTSVISACELLGDRRLG-RDIHAYVITTGFAV---DISVCNSLTQMYLNAGSWR 349
Query: 99 YAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVS 158
A +F+ + ++ +W TMI GY + P A+ YR M V+PD T +L A +
Sbjct: 350 EAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACA 409
Query: 159 KSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR------- 211
++ G LH + IK S V V N+L+++Y+ C + A +F ++ +
Sbjct: 410 TLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTS 469
Query: 212 ----FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAG 267
LN R EAL R+M ++P+ T+ + L+ACA +GAL G+ +H ++L+ G
Sbjct: 470 IIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTG 528
Query: 268 LRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXX 327
+ + + NALLD+Y +CG + A F ++++V SW L+ G + G G
Sbjct: 529 VGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFD 587
Query: 328 XXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRA 387
++ P EITF+ +L CS M+ +G YF +M E+YG+ P ++HY C+VDLL RA
Sbjct: 588 RMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRA 646
Query: 388 GLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLS 447
G +++A+++IQ MPV P+ +W LL AC IH + LGE++ H+ +L+ K G Y+LL
Sbjct: 647 GELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLC 706
Query: 448 NLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXX 507
NLYA +W +V +R+ M ++G+ G S VE+ +V+ F D+ HPQ++++
Sbjct: 707 NLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLE 766
Query: 508 XXXXXXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLR 567
G +E+ D E +++ HSE+ AIAF L+NT PG PI V KNL
Sbjct: 767 GFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLS 826
Query: 568 VCADCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKD 607
+C +CH +K ISK REI +RD FHHF+ G+CSC D
Sbjct: 827 MCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 166/332 (50%), Gaps = 22/332 (6%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFY-RQMTMSCVEPDTHTYPFLLKAVS 158
A VF + N+F+WN ++ GYA+ A+ Y R + + V+PD +T+P +L+
Sbjct: 148 AWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCG 207
Query: 159 KSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR------- 211
++ G+ +H ++ G+E + V N+L+ +Y CGD +SA +F+ M R
Sbjct: 208 GIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNA 267
Query: 212 ----FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAG 267
+ NG +E L LF M V+PD T+ S++SAC LG LGR +H Y++ G
Sbjct: 268 MISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTG 327
Query: 268 LRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXX 327
++ V N+L +Y GS REA+++F ME +++VSWTT+I G N
Sbjct: 328 FAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYR 387
Query: 328 XXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHY----GCMVDL 383
+ P EIT VL AC+ G LD G + + I R+ Y ++++
Sbjct: 388 MMDQDSVKPDEITVAAVLSACATLGDLDTGVELHK-----LAIKARLISYVIVANNLINM 442
Query: 384 LSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGA 415
S+ + +A + N+P + N + W +++
Sbjct: 443 YSKCKCIDKALDIFHNIP-RKNVISWTSIIAG 473
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 84/208 (40%), Gaps = 15/208 (7%)
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
NG+ EA+ L M V D V+L+ C A E G +V+ L + + +
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNG-FGXXXXXXXXXXXXQK 333
NA L ++ + G++ +A VFG+M ERN+ SW L+ G A G F
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 334 LAPGEITFVGVLYACSHCGMLDEGFDYFRRMKE------EYGIAPRIEHYGCMVDLLSRA 387
+ P TF VL C G R KE YG I+ ++ + +
Sbjct: 192 VKPDVYTFPCVLRTCG-------GIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKC 244
Query: 388 GLVKQAYEYIQNMPVQPNAVIWRTLLGA 415
G VK A MP + + + W ++
Sbjct: 245 GDVKSARLLFDRMP-RRDIISWNAMISG 271
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 345 bits (884), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 202/579 (34%), Positives = 309/579 (53%), Gaps = 16/579 (2%)
Query: 44 HVLTKCISLLQYCASSKHKLK--QIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAH 101
H + LL A ++ +K Q+H + ++ G+ L P + +LI P +
Sbjct: 13 HNYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLI-PLVANNLINFYSKSQLPFD-SR 70
Query: 102 LVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSL 161
F + TW+++I +A+++ P +L F ++M + PD H P K+ +
Sbjct: 71 RAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILS 130
Query: 162 NVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------- 211
G ++H +++K G+++ VFV +SL+ +YA CG+ A K+F+ M R
Sbjct: 131 RCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMY 190
Query: 212 -FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRE 270
+A G EAL LF+E + + ++ S++S CA LELGR++H +K+
Sbjct: 191 GYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDS 250
Query: 271 NLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXX 330
+ V ++L+ LY+KCG A QVF E+ +N+ W ++ A +
Sbjct: 251 SSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMK 310
Query: 331 XQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLV 390
+ P ITF+ VL ACSH G++DEG YF +MKE I P +HY +VD+L RAG +
Sbjct: 311 LSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESR-IEPTDKHYASLVDMLGRAGRL 369
Query: 391 KQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLY 450
++A E I NMP+ P +W LL +CT+H + L A + +L P SG ++ LSN Y
Sbjct: 370 QEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAY 429
Query: 451 ASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXX 510
A++ R+ D RK + G KK G S VE N+V+ F G+R H +S+++Y
Sbjct: 430 AADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELG 489
Query: 511 XXXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCA 570
GY+ T VL +++ +EK Q + YHSE++AIAF L+ PIRVMKNLRVC
Sbjct: 490 EEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCG 549
Query: 571 DCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
DCH AIK +S R I++RD +RFH F GKCSC DYW
Sbjct: 550 DCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 340 bits (873), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 193/564 (34%), Positives = 296/564 (52%), Gaps = 21/564 (3%)
Query: 65 QIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAE 124
QIH F ++ G + ++G L+ + S ++ A VF I + ++ +WN MI G+
Sbjct: 128 QIHGFCLKIGFEMM-VEVGNSLV-DMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVH 185
Query: 125 SQDPKPALHFYRQMTMSCVE--PDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFE--S 180
+ AL + M + ++ PD T LLKA S + + G+ +H +++GF S
Sbjct: 186 AGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPS 245
Query: 181 LVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMS 229
+ SL+ +Y CG SA K F+ + ++ +A G EA+ LF+ +
Sbjct: 246 SATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQ 305
Query: 230 ANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIR 289
+ D F + S++ A+ L G+++ +K V+N+++D+Y KCG +
Sbjct: 306 ELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVD 365
Query: 290 EAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACS 349
EA++ F EM+ ++V+SWT +I G +G G + P E+ ++ VL ACS
Sbjct: 366 EAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACS 425
Query: 350 HCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIW 409
H GM+ EG + F ++ E +GI PR+EHY C+VDLL RAG +K+A I MP++PN IW
Sbjct: 426 HSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIW 485
Query: 410 RTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQD 469
+TLL C +HG + LG+ LL+++ K+ +YV++SNLY W + R+
Sbjct: 486 QTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIK 545
Query: 470 GVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVY-AXXXXXXXXXXXXGYVPRTENVLAD 528
G+KK G S VE+ V+ F G+ SHP + + GYV ++ L D
Sbjct: 546 GLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHD 605
Query: 529 IEEEEKEQALSYHSEKVAIAFMLLNTA---PGTPIRVMKNLRVCADCHMAIKLISKVYDR 585
I++E KE+ L HSEK+AI L G IRV KNLRVC DCH IK +SK+
Sbjct: 606 IDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKI 665
Query: 586 EIVIRDRSRFHHFRGGKCSCKDYW 609
V+RD RFH F G CSC DYW
Sbjct: 666 AYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 199/448 (44%), Gaps = 62/448 (13%)
Query: 42 LPHVLTKCISLLQYCASS--KHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSY 99
+P+ +S+L+ C + Q+H + ++ G L N +LI P+
Sbjct: 2 IPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGL-NLITSNYLIDMYCKCREPL-M 59
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A+ VF + NV +W+ ++ G+ + D K +L + +M + P+ T+ LKA
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL 119
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-------- 211
+ +G +H +K GFE +V V NSL+ +Y+ CG A KVF + DR
Sbjct: 120 LNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAM 179
Query: 212 ---FALNGRPNEALTLFREMSANGVE--PDGFTVVSLLSACAELGALELGRRVHVYLLKA 266
F G ++AL F M ++ PD FT+ SLL AC+ G + G+++H +L+++
Sbjct: 180 IAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRS 239
Query: 267 GLR--ENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNG------- 317
G + + +L+DLY KCG + A++ F +++E+ ++SW++LI+G A G
Sbjct: 240 GFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMG 299
Query: 318 --------------------------FGXXXXXXXXXXXXQKLAPGEITFV--GVLYACS 349
F KL G T V V+
Sbjct: 300 LFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYL 359
Query: 350 HCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNM---PVQPNA 406
CG++DE F M+ + I+ + ++ + GL K++ M ++P+
Sbjct: 360 KCGLVDEAEKCFAEMQLKDVIS-----WTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDE 414
Query: 407 VIWRTLLGACTIHGHLSLGEIARSHLLK 434
V + +L AC+ G + GE S LL+
Sbjct: 415 VCYLAVLSACSHSGMIKEGEELFSKLLE 442
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 192/596 (32%), Positives = 319/596 (53%), Gaps = 27/596 (4%)
Query: 39 ENPLPHVLTKCISLLQYCASSKHKLKQI-HAFSIRHGVPLHNPDMGKHLIFTIVSLSAPM 97
+N H+ TK + + S+ + H +++ G + HL+ + V L +
Sbjct: 23 KNDFFHLKTKAFLVHKLSESTNAAFTNLLHTLTLKLGFASDTFTV-NHLVISYVKLK-EI 80
Query: 98 SYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMS-CVEPDTHTYPFLLKA 156
+ A +F + PNV +W ++I GY + P+ AL +++M V P+ +T+ + KA
Sbjct: 81 NTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKA 140
Query: 157 VSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMT------- 209
S R G+ +H+ +G + V +SL+ +Y C D E+A +VF+SM
Sbjct: 141 CSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVV 200
Query: 210 ------DRFALNGRPNEALTLFREMSA--NGVEPDGFTVVSLLSACAELGALELGRRVHV 261
+A N R +EA+ LFR +A + F + S++SAC+ LG L+ G+ H
Sbjct: 201 SWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHG 260
Query: 262 YLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXX 321
+ + G N V +LLD+YAKCGS+ A+++F + +V+S+T++I+ A +G G
Sbjct: 261 LVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEA 320
Query: 322 XXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMV 381
++ P +T +GVL+ACSH G+++EG +Y M E+YG+ P HY C+V
Sbjct: 321 AVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVV 380
Query: 382 DLLSRAGLVKQAYEYIQNMPV--QPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKH 439
D+L R G V +AYE + + V + A++W LL A +HG + + A L++ +
Sbjct: 381 DMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQV 440
Query: 440 SGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQS 499
+ Y+ LSN YA W D +++R M + G K S +E + VY F GD S +S
Sbjct: 441 TSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSCDES 500
Query: 500 QDVYAXXXXXXXXXXXXGY------VPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLN 553
++ G+ + + +V D++EE K++ +S H E++A+A+ LL+
Sbjct: 501 GEIERFLKDLEKRMKERGHRGSSSMITTSSSVFVDVDEEAKDEMVSLHCERLALAYGLLH 560
Query: 554 TAPGTPIRVMKNLRVCADCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
G+ IR+M NLR+C DCH A KLIS++ +REIV+RD +RFH F+ G C+C+DYW
Sbjct: 561 LPAGSTIRIMNNLRMCRDCHEAFKLISEIVEREIVVRDVNRFHCFKNGSCTCRDYW 616
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 334 bits (857), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 185/501 (36%), Positives = 278/501 (55%), Gaps = 49/501 (9%)
Query: 50 ISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRN 109
++ L+ ++ LKQ H + I G+ N ++ K + S + + YA+ VFT
Sbjct: 18 VTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFI--EACSNAGHLRYAYSVFTHQPC 75
Query: 110 PNVFTWNTMIRGYAESQDPKP---ALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREG 166
PN + NTMIR + +P A+ YR++ C +PDT T+PF+LK + +V G
Sbjct: 76 PNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFG 135
Query: 167 EALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR--------------- 211
+H + GF+S V V L+ +Y +CG A K+F+ M +
Sbjct: 136 RQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKV 195
Query: 212 -----------------------------FALNGRPNEALTLFREMSANGVEPDGFTVVS 242
+A +GR +EA+ +F+ M VEPD T+++
Sbjct: 196 GEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLA 255
Query: 243 LLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERN 302
+LSACA+LG+LELG R+ Y+ G+ + + NA++D+YAK G+I +A VF + ERN
Sbjct: 256 VLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERN 315
Query: 303 VVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFR 362
VV+WTT+I GLA +G G + P ++TF+ +L ACSH G +D G F
Sbjct: 316 VVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFN 375
Query: 363 RMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHL 422
M+ +YGI P IEHYGCM+DLL RAG +++A E I++MP + NA IW +LL A +H L
Sbjct: 376 SMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDL 435
Query: 423 SLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVEL 482
LGE A S L+KLEP +SG+Y+LL+NLY++ RW + + +R M GVKK G S +E+
Sbjct: 436 ELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEV 495
Query: 483 GNRVYEFTMGDRSHPQSQDVY 503
NRVY+F GD +HPQ + ++
Sbjct: 496 ENRVYKFISGDLTHPQVERIH 516
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 184/559 (32%), Positives = 292/559 (52%), Gaps = 18/559 (3%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
K+IH ++R + + M I + S +SYA +F + N+ WN MI YA
Sbjct: 251 KEIHCHAVRSRIETGDV-MVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYA 309
Query: 124 ESQDPKPALHFYRQMT-MSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLV 182
+ A +++M+ + ++PD T LL A + + EG +H ++ GF +
Sbjct: 310 RNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHM 365
Query: 183 FVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMSAN 231
+ +L+ +Y CG +SA +F+ M ++ + NG+ AL LF+E+ +
Sbjct: 366 VLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDS 425
Query: 232 GVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREA 291
+ PD T+ S+L A AE +L GR +H Y++K+ N ++N+L+ +YA CG + +A
Sbjct: 426 SLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDA 485
Query: 292 QQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHC 351
++ F + ++VVSW ++I+ AV+GFG ++ P + TF +L ACS
Sbjct: 486 RKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSIS 545
Query: 352 GMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRT 411
GM+DEG++YF MK EYGI P IEHYGCM+DL+ R G A +++ MP P A IW +
Sbjct: 546 GMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGS 605
Query: 412 LLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGV 471
LL A H +++ E A + K+E ++G YVLL N+YA RW DV I+ M G+
Sbjct: 606 LLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGI 665
Query: 472 KKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXG-YVPRTENVLADIE 530
+T S VE + + FT GDRSH + +Y YV + +
Sbjct: 666 SRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLRPETL 725
Query: 531 EEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDREIVIR 590
+ + + HS ++A F L++T G + V N R+C CH ++ S++ REIV+
Sbjct: 726 VKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVG 785
Query: 591 DRSRFHHFRGGKCSCKDYW 609
D FHHF G+CSC +YW
Sbjct: 786 DSKIFHHFSNGRCSCGNYW 804
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 172/338 (50%), Gaps = 21/338 (6%)
Query: 97 MSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKA 156
M A +F + + F WN MI+G+ A+ FY +M + V+ DT TYPF++K+
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 157 VSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALN- 215
V+ ++ EG+ +H++ IK GF S V+V NSL+ +Y G A KVFE M +R ++
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 216 ----------GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLK 265
G +L LF+EM G +PD F+ +S L AC+ + + ++G+ +H + ++
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVR 259
Query: 266 AGLRE-NLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXX 324
+ + ++ V+ ++LD+Y+K G + A+++F M +RN+V+W +I A NG
Sbjct: 260 SRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFL 319
Query: 325 XXXXXXXQK-LAPGEITFVGVLYACSHC-GMLDEGFDYFRRMKEEYGIAPRIEHYGCMVD 382
Q L P IT + +L A + G G+ R G P + ++D
Sbjct: 320 CFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRR------GFLPHMVLETALID 373
Query: 383 LLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHG 420
+ G +K A E I + + N + W +++ A +G
Sbjct: 374 MYGECGQLKSA-EVIFDRMAEKNVISWNSIIAAYVQNG 410
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 330 bits (845), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 172/562 (30%), Positives = 298/562 (53%), Gaps = 17/562 (3%)
Query: 63 LKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGY 122
+K+++ F + +G M + L+ + + A +F I N++++ ++I G+
Sbjct: 142 VKRVYGFMMSNGFEPEQYMMNRILLMHVKC--GMIIDARRLFDEIPERNLYSYYSIISGF 199
Query: 123 AESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLV 182
+ A ++ M + +THT+ +L+A + ++ G+ LH +K G
Sbjct: 200 VNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNT 259
Query: 183 FVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMSAN 231
FV L+ +Y+ CGD E A FE M ++ +AL+G EAL L +M +
Sbjct: 260 FVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDS 319
Query: 232 GVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREA 291
GV D FT+ ++ +L LEL ++ H L++ G + AL+D Y+K G + A
Sbjct: 320 GVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTA 379
Query: 292 QQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHC 351
+ VF ++ +N++SW L+ G A +G G +AP +TF+ VL AC++
Sbjct: 380 RYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYS 439
Query: 352 GMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRT 411
G+ ++G++ F M E +GI PR HY CM++LL R GL+ +A +I+ P++ +W
Sbjct: 440 GLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAA 499
Query: 412 LLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGV 471
LL AC + +L LG + L + P+ G+YV++ N+Y S + + + +++ G+
Sbjct: 500 LLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGL 559
Query: 472 KKTPGYSLVELGNRVYEFTMGDR----SHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLA 527
P + VE+G++ + F GDR + + +Y GY +++L
Sbjct: 560 SMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLP 619
Query: 528 DIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDREI 587
D++E+E+E+ YHSEK+AIA+ L+NT P+++ +N R+C +CH ++ IS V RE+
Sbjct: 620 DVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGREM 679
Query: 588 VIRDRSRFHHFRGGKCSCKDYW 609
V+RD SRFHHF+ GKCSC YW
Sbjct: 680 VVRDASRFHHFKEGKCSCGGYW 701
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 134/304 (44%), Gaps = 14/304 (4%)
Query: 129 KPALHFYRQMTMSC-VEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNS 187
+ A + + + C + TY L++A + ++R + ++ + NGFE ++ N
Sbjct: 104 REAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNR 163
Query: 188 LLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMSANGVEPD 236
+L ++ CG A ++F+ + +R F G EA LF+ M + +
Sbjct: 164 ILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCE 223
Query: 237 GFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFG 296
T +L A A LG++ +G+++HV LK G+ +N V L+D+Y+KCG I +A+ F
Sbjct: 224 THTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFE 283
Query: 297 EMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDE 356
M E+ V+W +I G A++G+ ++ + T ++ + L+
Sbjct: 284 CMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLEL 343
Query: 357 GFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGAC 416
+ G I +VD S+ G V A +P + N + W L+G
Sbjct: 344 TKQAHASLIRN-GFESEIVANTALVDFYSKWGRVDTARYVFDKLP-RKNIISWNALMGGY 401
Query: 417 TIHG 420
HG
Sbjct: 402 ANHG 405
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 99/217 (45%), Gaps = 5/217 (2%)
Query: 207 SMTDRFALNGRPNEALTLFREMSANGVEPDGF-TVVSLLSACAELGALELGRRVHVYLLK 265
S ++ L R EA LF + G T +L+ AC L ++ +RV+ +++
Sbjct: 92 SQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMS 151
Query: 266 AGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXX 325
G +++N +L ++ KCG I +A+++F E+ ERN+ S+ ++I G VN
Sbjct: 152 NGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGF-VNFGNYVEAFE 210
Query: 326 XXXXXXQKLAPGEI-TFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLL 384
++L+ E TF +L A + G + G + G+ ++D+
Sbjct: 211 LFKMMWEELSDCETHTFAVMLRASAGLGSIYVG-KQLHVCALKLGVVDNTFVSCGLIDMY 269
Query: 385 SRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGH 421
S+ G ++ A + MP + V W ++ +HG+
Sbjct: 270 SKCGDIEDARCAFECMP-EKTTVAWNNVIAGYALHGY 305
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 326 bits (836), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 177/537 (32%), Positives = 289/537 (53%), Gaps = 54/537 (10%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
K++H ++ G L + ++ + + SL M A VF +VF+WN MI GY
Sbjct: 155 KKLHCHVVKFG--LGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYN 212
Query: 124 ESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVF 183
++ + ++ +M + V P + T +L A SK + + +H + E +
Sbjct: 213 RMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLR 272
Query: 184 VRNSLLHIYAACGDTESAHKVFESMTDRFALN---------------------------- 215
+ N+L++ YAACG+ + A ++F SM R ++
Sbjct: 273 LENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRD 332
Query: 216 --------------GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHV 261
G NE+L +FREM + G+ PD FT+VS+L+ACA LG+LE+G +
Sbjct: 333 RISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKT 392
Query: 262 YLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXX 321
Y+ K ++ ++ V NAL+D+Y KCG +AQ+VF +M++R+ +WT ++VGLA NG G
Sbjct: 393 YIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQE 452
Query: 322 XXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMV 381
+ P +IT++GVL AC+H GM+D+ +F +M+ ++ I P + HYGCMV
Sbjct: 453 AIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMV 512
Query: 382 DLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSG 441
D+L RAGLVK+AYE ++ MP+ PN+++W LLGA +H + E+A +L+LEP +
Sbjct: 513 DMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGA 572
Query: 442 DYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQD 501
Y LL N+YA +RW D++ +R+ ++ +KKTPG+SL+E+ +EF GD+SH QS++
Sbjct: 573 VYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEE 632
Query: 502 VYAXXXXXXXXXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGT 558
+Y Y+P T +L + + + VA F+ L+ PGT
Sbjct: 633 IYMKLEELAQESTFAAYLPDTSELLFEAGD----------AYSVANRFVRLSGHPGT 679
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 123/471 (26%), Positives = 212/471 (45%), Gaps = 84/471 (17%)
Query: 47 TKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHL-IFTIVSLSAPMSYAHLVFT 105
++ IS+L C ++ + KQ+H+ SI GV NP K L +F L +SYA+ +F
Sbjct: 35 SRFISILGVCKTT-DQFKQLHSQSITRGVA-PNPTFQKKLFVFWCSRLGGHVSYAYKLFV 92
Query: 106 MIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVRE 165
I P+V WN MI+G+++ + Y M V PD+HT+PFLL + +
Sbjct: 93 KIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALA 152
Query: 166 -GEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE--SMTDRFALN------- 215
G+ LH +K G S ++V+N+L+ +Y+ CG + A VF+ D F+ N
Sbjct: 153 CGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYN 212
Query: 216 --GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
E++ L EM N V P T++ +LSAC+++ +L +RVH Y+ + +L
Sbjct: 213 RMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLR 272
Query: 274 VVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVG--------------------- 312
+ NAL++ YA CG + A ++F M+ R+V+SWT+++ G
Sbjct: 273 LENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRD 332
Query: 313 -----LAVNGF---GXXXXXXXXXXXXQK--LAPGEITFVGVLYACSHCGMLDEGFDYFR 362
+ ++G+ G Q + P E T V VL AC+H G L+ G ++ +
Sbjct: 333 RISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG-EWIK 391
Query: 363 RMKEEYGIAPRIEHYGCMVDLLSRAGLVKQA----------------------------- 393
++ I + ++D+ + G ++A
Sbjct: 392 TYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQ 451
Query: 394 -----YEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKH 439
+ +Q+M +QP+ + + +L AC H + + AR K+ H
Sbjct: 452 EAIKVFFQMQDMSIQPDDITYLGVLSACN---HSGMVDQARKFFAKMRSDH 499
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 324 bits (831), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 173/482 (35%), Positives = 269/482 (55%), Gaps = 45/482 (9%)
Query: 59 SKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTM 118
S+++ K+I+A I HG+ + + K + F M YA +F + NPNVF +N++
Sbjct: 22 SRNEWKKINASIIIHGLSQSSFMVTKMVDFC--DKIEDMDYATRLFNQVSNPNVFLYNSI 79
Query: 119 IRGYAESQDPKPALHFYRQMTMSCVE-PDTHTYPFLLKAVSKSLNVREGEALHSVTIKNG 177
IR Y + + Y+Q+ E PD T+PF+ K+ + + G+ +H K G
Sbjct: 80 IRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFG 139
Query: 178 FESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALN---------------------- 215
V N+L+ +Y D AHKVF+ M +R ++
Sbjct: 140 PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFH 199
Query: 216 --------------------GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALEL 255
G EA+ FREM G+EPD +++S+L +CA+LG+LEL
Sbjct: 200 LMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLEL 259
Query: 256 GRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAV 315
G+ +H+Y + G + V NAL+++Y+KCG I +A Q+FG+ME ++V+SW+T+I G A
Sbjct: 260 GKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAY 319
Query: 316 NGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIE 375
+G K+ P ITF+G+L ACSH GM EG YF M+++Y I P+IE
Sbjct: 320 HGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIE 379
Query: 376 HYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKL 435
HYGC++D+L+RAG +++A E + MP++P++ IW +LL +C G+L + +A HL++L
Sbjct: 380 HYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVEL 439
Query: 436 EPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRS 495
EP+ G+YVLL+N+YA +W DV +RK + + +KKTPG SL+E+ N V EF GD S
Sbjct: 440 EPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNS 499
Query: 496 HP 497
P
Sbjct: 500 KP 501
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 138/321 (42%), Gaps = 49/321 (15%)
Query: 144 EPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHK 203
E + + PFL + S++ E + +++ I +G F+ ++ D + A +
Sbjct: 8 EVENYFIPFLQRVKSRN----EWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATR 63
Query: 204 VFESMTD-----------RFALNGRPNEALTLFREMSANGVE-PDGFTVVSLLSACAELG 251
+F +++ + N + + +++++ E PD FT + +CA LG
Sbjct: 64 LFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLG 123
Query: 252 ALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIV 311
+ LG++VH +L K G R ++ NAL+D+Y K + +A +VF EM ER+V+SW +L+
Sbjct: 124 SCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLS 183
Query: 312 GLA-----------------------------VNGFGXXXXXXXXXXXXQ--KLAPGEIT 340
G A G G Q + P EI+
Sbjct: 184 GYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEIS 243
Query: 341 FVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNM 400
+ VL +C+ G L+ G + E G + ++++ S+ G++ QA + M
Sbjct: 244 LISVLPSCAQLGSLELG-KWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQM 302
Query: 401 PVQPNAVIWRTLLGACTIHGH 421
+ + + W T++ HG+
Sbjct: 303 EGK-DVISWSTMISGYAYHGN 322
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 323 bits (828), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 168/503 (33%), Positives = 272/503 (54%), Gaps = 28/503 (5%)
Query: 107 IRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREG 166
I+ ++ WN +I GY ++D A +R M E ++ ++ L+K S +
Sbjct: 191 IKKESILIWNVLINGYCRAKDMHMATTLFRSMP----ERNSGSWSTLIKGYVDSGELNRA 246
Query: 167 EALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFR 226
+ L + E V +L++ ++ GD E+A ++ +
Sbjct: 247 KQLFELMP----EKNVVSWTTLINGFSQTGDYETA--------------------ISTYF 282
Query: 227 EMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCG 286
EM G++P+ +T+ ++LSAC++ GAL G R+H Y+L G++ + + AL+D+YAKCG
Sbjct: 283 EMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCG 342
Query: 287 SIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLY 346
+ A VF M ++++SWT +I G AV+G P E+ F+ VL
Sbjct: 343 ELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLT 402
Query: 347 ACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNA 406
AC + +D G ++F M+ +Y I P ++HY +VDLL RAG + +A+E ++NMP+ P+
Sbjct: 403 ACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDL 462
Query: 407 VIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSM 466
W L AC H E +LL+L+P+ G Y+ L +AS+ DV+ R S+
Sbjct: 463 TTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSL 522
Query: 467 LQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVL 526
+ +++ G+S +EL ++ +F+ GD SH +Q++ GY P + +
Sbjct: 523 QKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWSI 582
Query: 527 ADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDRE 586
DIEEEEKE HSEK+A+ L TAPGT IR++KNLR+C DCH +K +SK+ R+
Sbjct: 583 HDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRD 642
Query: 587 IVIRDRSRFHHFRGGKCSCKDYW 609
I++RD +FHHF+ G+CSC DYW
Sbjct: 643 ILLRDARQFHHFKDGRCSCGDYW 665
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 130/269 (48%), Gaps = 20/269 (7%)
Query: 55 YCASSKHKLKQIH-AFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVF 113
YC + K +H A ++ +P N LI V S ++ A +F ++ NV
Sbjct: 206 YC-----RAKDMHMATTLFRSMPERNSGSWSTLIKGYVD-SGELNRAKQLFELMPEKNVV 259
Query: 114 TWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVT 173
+W T+I G++++ D + A+ Y +M ++P+ +T +L A SKS + G +H
Sbjct: 260 SWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYI 319
Query: 174 IKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEAL 222
+ NG + + +L+ +YA CG+ + A VF +M + +A++GR ++A+
Sbjct: 320 LDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAI 379
Query: 223 TLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYL-LKAGLRENLHVVNALLDL 281
FR+M +G +PD +++L+AC ++LG + L + L ++DL
Sbjct: 380 QCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDL 439
Query: 282 YAKCGSIREAQQVFGEME-ERNVVSWTTL 309
+ G + EA ++ M ++ +W L
Sbjct: 440 LGRAGKLNEAHELVENMPINPDLTTWAAL 468
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 116/327 (35%), Gaps = 103/327 (31%)
Query: 170 HSVTI-KNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREM 228
+S++I +N E FV N+L+ G TE+A FES F L M
Sbjct: 78 YSLSIFRNSEERNPFVLNALIR-----GLTENAR--FESSVRHFIL-------------M 117
Query: 229 SANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSI 288
GV+PD T +L + ++LG LGR +H LK + + V +L+D+YAK G +
Sbjct: 118 LRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQL 177
Query: 289 REAQQVFGE-----------------------------------MEERNVVSWTTLIVGL 313
+ A QVF E M ERN SW+TLI G
Sbjct: 178 KHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGY 237
Query: 314 A--------------------------VNGFGXXXXXXXXXXX-----XQKLAPGEITFV 342
+NGF + L P E T
Sbjct: 238 VDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIA 297
Query: 343 GVLYACSHCGMLDEG-------FDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYE 395
VL ACS G L G D ++ G A +VD+ ++ G + A
Sbjct: 298 AVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTA--------LVDMYAKCGELDCAAT 349
Query: 396 YIQNMPVQPNAVIWRTLLGACTIHGHL 422
NM + + W ++ +HG
Sbjct: 350 VFSNMN-HKDILSWTAMIQGWAVHGRF 375
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 318 bits (815), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 191/678 (28%), Positives = 319/678 (47%), Gaps = 120/678 (17%)
Query: 50 ISLLQYCASSK--HKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMI 107
+ LLQ C++ + + +QIH + +R G+ N M LI + S + + + VF +
Sbjct: 93 VKLLQVCSNKEGFAEGRQIHGYVLRLGLE-SNVSMCNSLI-VMYSRNGKLELSRKVFNSM 150
Query: 108 RNPNVFTWNTMI-----------------------------------RGYAESQDPKPAL 132
++ N+ +WN+++ GYA K A+
Sbjct: 151 KDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAI 210
Query: 133 HFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIY 192
++M ++ ++P T + LL+AV++ +++ G+A+H ++N V+V +L+ +Y
Sbjct: 211 AVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMY 270
Query: 193 AACGDTESAHKVFE---------------------------------------------- 206
G A VF+
Sbjct: 271 IKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWN 330
Query: 207 SMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAE----------------- 249
S+ +A G+P +AL + +M GV P+ + ++ S C++
Sbjct: 331 SLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEE 390
Query: 250 ---------------LGALEL---GRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREA 291
LG L L G+ VH + L+ L + +V AL+D+Y K G ++ A
Sbjct: 391 GVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSA 450
Query: 292 QQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHC 351
++F ++ +++ SW +++G A+ G G + P ITF VL C +
Sbjct: 451 IEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNS 510
Query: 352 GMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRT 411
G++ EG+ YF M+ YGI P IEH CMVDLL R+G + +A+++IQ M ++P+A IW
Sbjct: 511 GLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGA 570
Query: 412 LLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGV 471
L +C IH L L EIA L LEP +S +Y+++ NLY++ RW DV+ IR M + V
Sbjct: 571 FLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRV 630
Query: 472 KKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLADIEE 531
+ +S +++ V+ F ++HP D+Y GYVP T + DI +
Sbjct: 631 RVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDISD 690
Query: 532 EEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDREIVIRD 591
EKE+ L H+EK+A+ + L+ PIRV+KN +C+D H K +S + +REIV+++
Sbjct: 691 SEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVLQE 750
Query: 592 RSRFHHFRGGKCSCKDYW 609
+R HHFR GKCSC D W
Sbjct: 751 GARVHHFRDGKCSCNDSW 768
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 164/378 (43%), Gaps = 53/378 (14%)
Query: 96 PMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLK 155
+ +A+ +F + + WN ++ S + + A+ +R+M S + T LL+
Sbjct: 38 SLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQ 97
Query: 156 AVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---- 211
S EG +H ++ G ES V + NSL+ +Y+ G E + KVF SM DR
Sbjct: 98 VCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSS 157
Query: 212 ------------------------------------------FALNGRPNEALTLFREMS 229
+A G +A+ + + M
Sbjct: 158 WNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ 217
Query: 230 ANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIR 289
G++P ++ SLL A AE G L+LG+ +H Y+L+ L +++V L+D+Y K G +
Sbjct: 218 IAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLP 277
Query: 290 EAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACS 349
A+ VF M+ +N+V+W +L+ GL+ + + P IT+ + +
Sbjct: 278 YARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYA 337
Query: 350 HCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEY---IQNMPVQPNA 406
G ++ D +MKE+ G+AP + + + S+ G + A + +Q V PNA
Sbjct: 338 TLGKPEKALDVIGKMKEK-GVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNA 396
Query: 407 VIWRTLLGACTIHGHLSL 424
TLL I G LSL
Sbjct: 397 ATMSTLL---KILGCLSL 411
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 126/284 (44%), Gaps = 51/284 (17%)
Query: 166 GEALHSVTIKNGFE-SLVFVRNSLLHIYAACGDTESAHKVFESMTDRFAL---------- 214
G +H IK G + S V ++ + Y C A+K+F+ M R L
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 215 -NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
+G +A+ LFREM +G + T+V LL C+ GR++H Y+L+ GL N+
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 274 VVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQK 333
+ N+L+ +Y++ G + +++VF M++RN+ SW +++
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILS---------------------- 163
Query: 334 LAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQA 393
++ + Y G+LDE E G+ P I + ++ + GL K A
Sbjct: 164 ------SYTKLGYVDDAIGLLDE--------MEICGLKPDIVTWNSLLSGYASKGLSKDA 209
Query: 394 YEYIQNMPV---QPNAVIWRTLLGACTIHGHLSLGEIARSHLLK 434
++ M + +P+ +LL A GHL LG+ ++L+
Sbjct: 210 IAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILR 253
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 315 bits (806), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 184/499 (36%), Positives = 266/499 (53%), Gaps = 45/499 (9%)
Query: 50 ISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRN 109
+ L+ S+ +LKQIHA I+ G+ + L F S S M+YA+LVFT I +
Sbjct: 28 LRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPS-DMNYAYLVFTRINH 86
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSC--VEPDTHTYPFLLKAVSKSLNVREGE 167
N F WNT+IRG++ S P+ A+ + M S V+P TYP + KA + R+G
Sbjct: 87 KNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGR 146
Query: 168 ALHSVTIKNGFESLVFVRNSLLHIY-------------------------------AACG 196
LH + IK G E F+RN++LH+Y A CG
Sbjct: 147 QLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCG 206
Query: 197 DTESAHKVFESMTDR-----------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLS 245
+ A +F+ M R F NGR +AL +FREM V+PDGFT+VSLL+
Sbjct: 207 LIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLN 266
Query: 246 ACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVS 305
ACA LGA E GR +H Y+++ N VV AL+D+Y KCG I E VF ++ +
Sbjct: 267 ACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSC 326
Query: 306 WTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMK 365
W ++I+GLA NGF L P ++F+GVL AC+H G + ++FR MK
Sbjct: 327 WNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMK 386
Query: 366 EEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLG 425
E+Y I P I+HY MV++L AGL+++A I+NMPV+ + VIW +LL AC G++ +
Sbjct: 387 EKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMA 446
Query: 426 EIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNR 485
+ A L KL+P + YVLLSN YAS + + R M + ++K G S +E+
Sbjct: 447 KRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFE 506
Query: 486 VYEFTMGDRSHPQSQDVYA 504
V+EF +HP+S ++Y+
Sbjct: 507 VHEFISCGGTHPKSAEIYS 525
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 173/499 (34%), Positives = 273/499 (54%), Gaps = 55/499 (11%)
Query: 50 ISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMS---YAHLVFTM 106
IS+L+ C + H + IHA IR H+ D ++F ++ + + + YA+ VF+
Sbjct: 33 ISVLRSCKNIAH-VPSIHAKIIR---TFHDQD--AFVVFELIRVCSTLDSVDYAYDVFSY 86
Query: 107 IRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREG 166
+ NPNV+ + MI G+ S + Y +M + V PD +++ +V K+ +++
Sbjct: 87 VSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDN----YVITSVLKACDLKVC 142
Query: 167 EALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR--------------- 211
+H+ +K GF S V ++ IY G+ +A K+F+ M DR
Sbjct: 143 REIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSEC 202
Query: 212 ---------------------------FALNGRPNEALTLFREMSANGVEPDGFTVVSLL 244
N N+AL LFREM V + FT V +L
Sbjct: 203 GFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVL 262
Query: 245 SACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVV 304
SAC++LGALELGR VH ++ + + V NAL+++Y++CG I EA++VF M +++V+
Sbjct: 263 SACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVI 322
Query: 305 SWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRM 364
S+ T+I GLA++G + P ++T V +L ACSH G+LD G + F M
Sbjct: 323 SYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSM 382
Query: 365 KEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSL 424
K + + P+IEHYGC+VDLL R G +++AY +I+N+P++P+ ++ TLL AC IHG++ L
Sbjct: 383 KRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMEL 442
Query: 425 GEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGN 484
GE L + E SG YVLLSNLYAS +W + IR+SM G++K PG S +E+ N
Sbjct: 443 GEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDN 502
Query: 485 RVYEFTMGDRSHPQSQDVY 503
+++EF +GD +HP + +Y
Sbjct: 503 QIHEFLVGDIAHPHKEAIY 521
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 310 bits (795), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 180/561 (32%), Positives = 287/561 (51%), Gaps = 27/561 (4%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
+QIHA IR G+ N + ++ V + A VF + ++ GY
Sbjct: 204 RQIHAHVIRAGL-CSNTSIETGIVNMYVKCGWLVG-AKRVFDQMAVKKPVACTGLMVGYT 261
Query: 124 ESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVF 183
++ + AL + + VE D+ + +LKA + + G+ +H+ K G ES V
Sbjct: 262 QAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVS 321
Query: 184 VRNSLLHIYAACGDTESAHKVFE-----------SMTDRFALNGRPNEALTLFREM-SAN 231
V L+ Y C ESA + F+ ++ + + EA+ F+ + S N
Sbjct: 322 VGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKN 381
Query: 232 GVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREA 291
+ FT S+ AC+ L +G +VH +K L + + +AL+ +Y+KCG + +A
Sbjct: 382 ASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDA 441
Query: 292 QQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHC 351
+VF M+ ++V+WT I G A G + P +TF+ VL ACSH
Sbjct: 442 NEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHA 501
Query: 352 GMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRT 411
G++++G M +Y +AP I+HY CM+D+ +R+GL+ +A ++++NMP +P+A+ W+
Sbjct: 502 GLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKC 561
Query: 412 LLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGV 471
L C H +L LGEIA L +L+P+ + YVL NLY +W + + K M + +
Sbjct: 562 FLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERML 621
Query: 472 KKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLADIEE 531
KK S ++ +++ F +GD+ HPQ+Q++Y G++ E +
Sbjct: 622 KKELSCSWIQEKGKIHRFIVGDKHHPQTQEIY------EKLKEFDGFM---EGDMFQCNM 672
Query: 532 EEKEQALSYHSEKVAIAFMLLN---TAPGTPIRVMKNLRVCADCHMAIKLISKVYDREIV 588
E+ + L HSE++AIAF L++ AP PI+V KNLR C DCH K +S V EIV
Sbjct: 673 TERREQLLDHSERLAIAFGLISVHGNAPA-PIKVFKNLRACPDCHEFAKHVSLVTGHEIV 731
Query: 589 IRDRSRFHHFRGGKCSCKDYW 609
IRD RFHHF+ GKCSC DYW
Sbjct: 732 IRDSRRFHHFKEGKCSCNDYW 752
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 158/381 (41%), Gaps = 35/381 (9%)
Query: 70 SIRHGVPLH--------NPD-MGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIR 120
S+ HG LH NP + ++ + + + A +F + N + TMI
Sbjct: 98 SLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMIS 157
Query: 121 GYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFES 180
YAE A+ + M S +P + Y LLK++ + G +H+ I+ G S
Sbjct: 158 AYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCS 217
Query: 181 LVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMS 229
+ ++++Y CG A +VF+ M + + GR +AL LF ++
Sbjct: 218 NTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLV 277
Query: 230 ANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIR 289
GVE D F +L ACA L L LG+++H + K GL + V L+D Y KC S
Sbjct: 278 TEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFE 337
Query: 290 EAQQVFGEMEERNVVSWTTLIVGLA-VNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYAC 348
A + F E+ E N VSW+ +I G ++ F T+ + AC
Sbjct: 338 SACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQAC 397
Query: 349 SHCGMLDEG----FDYFRR--MKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPV 402
S + G D +R + +YG + I Y S+ G + A E ++M
Sbjct: 398 SVLADCNIGGQVHADAIKRSLIGSQYGESALITMY-------SKCGCLDDANEVFESMD- 449
Query: 403 QPNAVIWRTLLGACTIHGHLS 423
P+ V W + +G+ S
Sbjct: 450 NPDIVAWTAFISGHAYYGNAS 470
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 137/301 (45%), Gaps = 16/301 (5%)
Query: 131 ALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFES-LVFVRNSLL 189
A F ++M + V +++Y L +A + ++ G LH ++ G E+ V ++N +L
Sbjct: 67 AFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHD-RMRMGIENPSVLLQNCVL 125
Query: 190 HIYAACGDTESAHKVFESMTD-----------RFALNGRPNEALTLFREMSANGVEPDGF 238
+Y C E A K+F+ M++ +A G ++A+ LF M A+G +P
Sbjct: 126 QMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSS 185
Query: 239 TVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEM 298
+LL + AL+ GR++H ++++AGL N + ++++Y KCG + A++VF +M
Sbjct: 186 MYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQM 245
Query: 299 EERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGF 358
+ V+ T L+VG G + + F VL AC+ L+ G
Sbjct: 246 AVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLG- 304
Query: 359 DYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLL-GACT 417
+ G+ + +VD + + A Q + +PN V W ++ G C
Sbjct: 305 KQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR-EPNDVSWSAIISGYCQ 363
Query: 418 I 418
+
Sbjct: 364 M 364
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%)
Query: 219 NEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNAL 278
NEA +EM GV ++ L AC EL +L GR +H + ++ + N +
Sbjct: 65 NEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCV 124
Query: 279 LDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNG 317
L +Y +C S+ +A ++F EM E N VS TT+I A G
Sbjct: 125 LQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQG 163
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 161/487 (33%), Positives = 263/487 (54%), Gaps = 33/487 (6%)
Query: 53 LQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSL------SAPMSYAHLVFTM 106
L+YC KQIH + +RH + L IF +L +S A +F+
Sbjct: 356 LEYC-------KQIHCYIMRHSISLD--------IFLTSALIDAYFKCRGVSMAQNIFSQ 400
Query: 107 IRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREG 166
+ +V + MI GY + +L +R + + P+ T +L + L ++ G
Sbjct: 401 CNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLG 460
Query: 167 EALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE-----------SMTDRFALN 215
LH IK GF++ + +++ +YA CG A+++FE SM R A +
Sbjct: 461 RELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQS 520
Query: 216 GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVV 275
P+ A+ +FR+M +G+ D ++ + LSACA L + G+ +H +++K L +++
Sbjct: 521 DNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSE 580
Query: 276 NALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNG-FGXXXXXXXXXXXXQKL 334
+ L+D+YAKCG+++ A VF M+E+N+VSW ++I +G +
Sbjct: 581 STLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGI 640
Query: 335 APGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAY 394
P +ITF+ ++ +C H G +DEG +FR M E+YGI P+ EHY C+VDL RAG + +AY
Sbjct: 641 RPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAY 700
Query: 395 EYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASER 454
E +++MP P+A +W TLLGAC +H ++ L E+A S L+ L+P +SG YVL+SN +A+ R
Sbjct: 701 ETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAR 760
Query: 455 RWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXX 514
W V +R M + V+K PGYS +E+ R + F GD +HP+S +Y+
Sbjct: 761 EWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELR 820
Query: 515 XXGYVPR 521
GY+P+
Sbjct: 821 LEGYIPQ 827
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 171/370 (46%), Gaps = 17/370 (4%)
Query: 65 QIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAE 124
Q+H + GV K+ + ++ S A +F M+ + TWN MI GY +
Sbjct: 260 QLHGLVVVSGVDFEGSI--KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQ 317
Query: 125 SQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFV 184
S + +L F+ +M S V PD T+ LL +VSK N+ + +H +++ +F+
Sbjct: 318 SGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFL 377
Query: 185 RNSLLHIYAACGDTESAHK-----------VFESMTDRFALNGRPNEALTLFREMSANGV 233
++L+ Y C A VF +M + NG ++L +FR + +
Sbjct: 378 TSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKI 437
Query: 234 EPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQ 293
P+ T+VS+L L AL+LGR +H +++K G ++ A++D+YAKCG + A +
Sbjct: 438 SPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYE 497
Query: 294 VFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGM 353
+F + +R++VSW ++I A + + ++ L AC++ +
Sbjct: 498 IFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACAN--L 555
Query: 354 LDEGF-DYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTL 412
E F ++ +A + ++D+ ++ G +K A + M + N V W ++
Sbjct: 556 PSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSI 614
Query: 413 LGACTIHGHL 422
+ AC HG L
Sbjct: 615 IAACGNHGKL 624
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 157/338 (46%), Gaps = 37/338 (10%)
Query: 103 VFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLN 162
+F + + WN M+ GYA+ + + M M + P+ T+ +L + L
Sbjct: 195 LFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLL 254
Query: 163 VREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMT-----------DR 211
+ G LH + + +G + ++NSLL +Y+ CG + A K+F M+
Sbjct: 255 IDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISG 314
Query: 212 FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLREN 271
+ +G E+LT F EM ++GV PD T SLL + ++ LE +++H Y+++ + +
Sbjct: 315 YVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLD 374
Query: 272 LHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXX 331
+ + +AL+D Y KC + AQ +F + +VV +T +I G NG
Sbjct: 375 IFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVK 434
Query: 332 QKLAPGEITFV------GVLYACS-----HCGMLDEGFDYFRRMKEEYGIAPRIEHYGC- 379
K++P EIT V G+L A H ++ +GFD R + GC
Sbjct: 435 VKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFD--NRC-----------NIGCA 481
Query: 380 MVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACT 417
++D+ ++ G + AYE + + + + V W +++ C
Sbjct: 482 VIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRCA 518
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 135/313 (43%), Gaps = 17/313 (5%)
Query: 52 LLQYCASSK--HKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMI-- 107
LLQ C++ + KQ+HAF I + + I + ++ S +F +
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSI--SGDSYTDERILGMYAMCGSFSDCGKMFYRLDL 98
Query: 108 RNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGE 167
R ++ WN++I + + AL FY +M V PD T+P L+KA N + +
Sbjct: 99 RRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGID 158
Query: 168 ALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFES-----------MTDRFALNG 216
L G + FV +SL+ Y G + K+F+ M + +A G
Sbjct: 159 FLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG 218
Query: 217 RPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVN 276
+ + F M + + P+ T +LS CA ++LG ++H ++ +G+ + N
Sbjct: 219 ALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKN 278
Query: 277 ALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAP 336
+LL +Y+KCG +A ++F M + V+W +I G +G + P
Sbjct: 279 SLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLP 338
Query: 337 GEITFVGVLYACS 349
ITF +L + S
Sbjct: 339 DAITFSSLLPSVS 351
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/474 (35%), Positives = 264/474 (55%), Gaps = 24/474 (5%)
Query: 48 KCISLLQYCASSKHKLK---QIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVF 104
+C+ L+ C+S KH L+ QIH S+++ + + + + + +SL+ +++A +
Sbjct: 15 QCLIFLKLCSSIKHLLQIHGQIHLSSLQNDSFI----ISELVRVSSLSLAKDLAFARTLL 70
Query: 105 TMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVR 164
+ TWN + RGY+ S P ++ Y +M ++P+ T+PFLLKA + L +
Sbjct: 71 LHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLT 130
Query: 165 EGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFAL---------- 214
G + +K+GF+ V+V N+L+H+Y C T A KVF+ MT+R +
Sbjct: 131 AGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALV 190
Query: 215 -NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
NG+ N F EM PD T+V LLSAC G L LG+ VH ++ L N
Sbjct: 191 ENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCR 248
Query: 274 VVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQK 333
+ AL+D+YAK G + A+ VF M ++NV +W+ +IVGLA GF +
Sbjct: 249 LGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKES 308
Query: 334 -LAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQ 392
+ P +TF+GVL ACSH G++D+G+ YF M++ + I P + HYG MVD+L RAG + +
Sbjct: 309 SVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNE 368
Query: 393 AYEYIQNMPVQPNAVIWRTLLGACTIH---GHLSLGEIARSHLLKLEPKHSGDYVLLSNL 449
AY++I+ MP +P+AV+WRTLL AC+IH +GE + L++LEPK SG+ V+++N
Sbjct: 369 AYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANR 428
Query: 450 YASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVY 503
+A R W + +R+ M + +KK G S +ELG + F G + +Y
Sbjct: 429 FAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIY 482
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 304 bits (778), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 156/451 (34%), Positives = 247/451 (54%), Gaps = 12/451 (2%)
Query: 92 SLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYP 151
+ S M A L+F I+ N TW T+I G+ D L Y+QM + E +
Sbjct: 158 TCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCIT 217
Query: 152 FLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR 211
++A + +V G+ +H+ IK GF+S + V NS+L +Y CG A F M D+
Sbjct: 218 IAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDK 277
Query: 212 FALN----------GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHV 261
+ +EAL +F+ + G P+ +T SL++ACA + AL G+++H
Sbjct: 278 DLITWNTLISELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHG 337
Query: 262 YLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEM-EERNVVSWTTLIVGLAVNGFGX 320
+ + G +N+ + NAL+D+YAKCG+I ++Q+VFGE+ + RN+VSWT++++G +G+G
Sbjct: 338 RIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGA 397
Query: 321 XXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCM 380
+ P I F+ VL AC H G++++G YF M+ EYGI P + Y C+
Sbjct: 398 EAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCV 457
Query: 381 VDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSL-GEIARSHLLKLEPKH 439
VDLL RAG + +AYE ++ MP +P+ W +LGAC H H L +A +++L+PK
Sbjct: 458 VDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKM 517
Query: 440 SGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQS 499
G YV+LS +YA+E +W D +RK M G KK G S + + N+V+ F + D+ P +
Sbjct: 518 VGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNA 577
Query: 500 QDVYAXXXXXXXXXXXXGYVPRTENVLADIE 530
VY+ GYVP ++++ D E
Sbjct: 578 SSVYSVLGLLIEETREAGYVPELDSLVNDQE 608
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 154/338 (45%), Gaps = 22/338 (6%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A +F + + +V W MI GYA S A + +M P+ T +LK+
Sbjct: 64 ARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRN 123
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDT-ESAHKVFESMTDR------- 211
+ G +H V +K G E ++V N+++++YA C T E+A +F + +
Sbjct: 124 MKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTT 183
Query: 212 ----FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAG 267
F G L ++++M E + + + A A + ++ G+++H ++K G
Sbjct: 184 LITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRG 243
Query: 268 LRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXX 327
+ NL V+N++LDLY +CG + EA+ F EME++++++W TLI L +
Sbjct: 244 FQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSD-SSEALLMFQ 302
Query: 328 XXXXQKLAPGEITFVGVLYACSHCGMLDEGFDY----FRRMKEEYGIAPRIEHYGCMVDL 383
Q P TF ++ AC++ L+ G FRR G +E ++D+
Sbjct: 303 RFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRR-----GFNKNVELANALIDM 357
Query: 384 LSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGH 421
++ G + + + + N V W +++ HG+
Sbjct: 358 YAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGY 395
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 18/241 (7%)
Query: 187 SLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMSANGVEP 235
+L+ Y G E A +F+ M DR +A + A F EM G P
Sbjct: 50 NLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSP 109
Query: 236 DGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQ-QV 294
+ FT+ S+L +C + L G VH ++K G+ +L+V NA++++YA C EA +
Sbjct: 110 NEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLI 169
Query: 295 FGEMEERNVVSWTTLIVGLA--VNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCG 352
F +++ +N V+WTTLI G +G G ++ P IT + A +
Sbjct: 170 FRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITI--AVRASASID 227
Query: 353 MLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTL 412
+ G + + G + ++DL R G + +A Y M + + W TL
Sbjct: 228 SVTTGKQIHASVIKR-GFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME-DKDLITWNTL 285
Query: 413 L 413
+
Sbjct: 286 I 286
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 304 bits (778), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 188/574 (32%), Positives = 296/574 (51%), Gaps = 33/574 (5%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSL---SAPMSYAHLVFTMIRNPNVFTWNTMIR 120
KQ+H +++ G LH + + ++ A A VF I+ N+ TWN+MI
Sbjct: 177 KQVHGLALKLG--LHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIA 234
Query: 121 GYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA------LHSVTI 174
+ K A+ + +M V D T + ++ KS ++ E LHS+T+
Sbjct: 235 AFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTV 294
Query: 175 KNGFESLVFVRNSLLHIYAA-CGDTESAHKVFESMT---DRFALNG--------RPNEAL 222
K+G + V +L+ +Y+ D +K+F M+ D A NG P A+
Sbjct: 295 KSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDPERAI 354
Query: 223 TLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLY 282
LF ++ + PD +T S+L ACA L +H ++K G + + N+L+ Y
Sbjct: 355 HLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAY 414
Query: 283 AKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFV 342
AKCGS+ +VF +M+ R+VVSW +++ +++G + P TF+
Sbjct: 415 AKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHG---QVDSILPVFQKMDINPDSATFI 471
Query: 343 GVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPV 402
+L ACSH G ++EG FR M E+ P++ HY C++D+LSRA +A E I+ MP+
Sbjct: 472 ALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPM 531
Query: 403 QPNAVIWRTLLGACTIHGHLSLGEIARSHLLKL-EPKHSGDYVLLSNLYASERRWTDVQT 461
P+AV+W LLG+C HG+ LG++A L +L EP +S Y+ +SN+Y +E + +
Sbjct: 532 DPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANL 591
Query: 462 IRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPR 521
K M V+K P S E+GN+V+EF G R P + VY GYVP
Sbjct: 592 SIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMGYVPE 651
Query: 522 TENV-LADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTP-----IRVMKNLRVCADCHMA 575
+ +EE++E L +HSEK+A+AF ++ + I++MKN R+C DCH
Sbjct: 652 MRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIMKNTRICIDCHNF 711
Query: 576 IKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
+KL SK+ +EI++RD +RFHHF+ CSC DYW
Sbjct: 712 MKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/485 (22%), Positives = 188/485 (38%), Gaps = 82/485 (16%)
Query: 51 SLLQYCASSKHKLKQI--HAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIR 108
+L Q CA ++ L I H + H + + + + + + YA VF +
Sbjct: 64 ALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMP 123
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYP--FLLKAVSKSLNVREG 166
NV +W +I GY ++ + + + M +H +P F L +V S G
Sbjct: 124 ERNVVSWTALITGYVQAGNEQEGFCLFSSML-------SHCFPNEFTLSSVLTSCRYEPG 176
Query: 167 EALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHK---VFE-----------SMTDRF 212
+ +H + +K G ++V N+++ +Y C D +A++ VFE SM F
Sbjct: 177 KQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAF 236
Query: 213 ALNGRPNEALTLFREMSANGVEPDGFTVVSLLSAC------AELGALELGR---RVHVYL 263
+A+ +F M ++GV GF +LL+ C ++L E+ + ++H
Sbjct: 237 QCCNLGKKAIGVFMRMHSDGV---GFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLT 293
Query: 264 LKAGLRENLHVVNALLDLYAK-CGSIREAQQVFGEMEE-RNVVSWTTLIVGLAVNGFGXX 321
+K+GL V AL+ +Y++ + ++F EM R++V+W +I AV
Sbjct: 294 VKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PER 352
Query: 322 XXXXXXXXXXQKLAPGEITFVGVLYAC--------------------------------- 348
+KL+P TF VL AC
Sbjct: 353 AIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIH 412
Query: 349 --SHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNA 406
+ CG LD F M + + M+ S G V Q M + P++
Sbjct: 413 AYAKCGSLDLCMRVFDDMDSR-----DVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDS 467
Query: 407 VIWRTLLGACTIHGHLSLG-EIARSHLLKLEP-KHSGDYVLLSNLYASERRWTDVQTIRK 464
+ LL AC+ G + G I RS K E Y + ++ + R+ + + + K
Sbjct: 468 ATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIK 527
Query: 465 SMLQD 469
M D
Sbjct: 528 QMPMD 532
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 94/188 (50%), Gaps = 21/188 (11%)
Query: 148 HTYPFLLKAVSKSLNVREGEALHSVTIKN--GFESLVFVRNSLLHIYAACGDTESAHKVF 205
Y L +A ++ N+ +G LH + + + V + N L+++YA CG+ A +VF
Sbjct: 60 QAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVF 119
Query: 206 ESMTDR-----------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALE 254
++M +R + G E LF M ++ P+ FT+ S+L++C E
Sbjct: 120 DTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSC----RYE 174
Query: 255 LGRRVHVYLLKAGLRENLHVVNALLDLYAKC---GSIREAQQVFGEMEERNVVSWTTLIV 311
G++VH LK GL +++V NA++ +Y +C + EA VF ++ +N+V+W ++I
Sbjct: 175 PGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIA 234
Query: 312 GLAVNGFG 319
G
Sbjct: 235 AFQCCNLG 242
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 303 bits (777), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 158/419 (37%), Positives = 240/419 (57%), Gaps = 12/419 (2%)
Query: 97 MSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKA 156
++ A VF I P+ +WN +I G A + A+ + QM S PD + LL A
Sbjct: 321 LNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCA 380
Query: 157 VSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESM---TDRFA 213
+K + + +G +HS IK GF + + V NSLL +Y C D +FE D +
Sbjct: 381 QTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVS 440
Query: 214 LNG---------RPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLL 264
N +P E L LF+ M + EPD T+ +LL C E+ +L+LG +VH Y L
Sbjct: 441 WNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSL 500
Query: 265 KAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXX 324
K GL + N L+D+YAKCGS+ +A+++F M+ R+VVSW+TLIVG A +GFG
Sbjct: 501 KTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALI 560
Query: 325 XXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLL 384
+ P +TFVGVL ACSH G+++EG + M+ E+GI+P EH C+VDLL
Sbjct: 561 LFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLL 620
Query: 385 SRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYV 444
+RAG + +A +I M ++P+ V+W+TLL AC G++ L + A ++LK++P +S +V
Sbjct: 621 ARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHV 680
Query: 445 LLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVY 503
LL +++AS W + +R SM + VKK PG S +E+ ++++ F D HP+ D+Y
Sbjct: 681 LLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIY 739
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 184/414 (44%), Gaps = 19/414 (4%)
Query: 50 ISLLQYCASSKH--KLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMI 107
ISL+ C+SS+ + ++IH + ++ + H I ++ + A VF +
Sbjct: 71 ISLICACSSSRSLAQGRKIHDHILNSNCK-YDTILNNH-ILSMYGKCGSLRDAREVFDFM 128
Query: 108 RNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGE 167
N+ ++ ++I GY+++ A+ Y +M + PD + ++KA + S +V G+
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 168 ALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVF-----------ESMTDRFALNG 216
LH+ IK S + +N+L+ +Y A +VF S+ F+ G
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 217 RPNEALTLFREMSANGV-EPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVV 275
EAL+ +EM + GV P+ + S L AC+ L + G ++H +K+ L N
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAG 308
Query: 276 NALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLA 335
+L D+YA+CG + A++VF ++E + SW +I GLA NG+
Sbjct: 309 CSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFI 368
Query: 336 PGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYE 395
P I+ +L A + L +G + ++G + ++ + + + +
Sbjct: 369 PDAISLRSLLCAQTKPMALSQGMQIHSYII-KWGFLADLTVCNSLLTMYTFCSDLYCCFN 427
Query: 396 YIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNL 449
++ ++V W T+L AC H E+ R L L + D++ + NL
Sbjct: 428 LFEDFRNNADSVSWNTILTACLQHEQPV--EMLRLFKLMLVSECEPDHITMGNL 479
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 128/291 (43%), Gaps = 26/291 (8%)
Query: 149 TYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESM 208
TY L+ A S S ++ +G +H + + + + N +L +Y CG A +VF+ M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 209 TDR-----------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGR 257
+R ++ NG+ EA+ L+ +M + PD F S++ ACA + LG+
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 258 RVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNG 317
++H ++K +L NAL+ +Y + + +A +VF + ++++SW+++I G + G
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 318 FGXXXXX-XXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEH 376
F P E F L ACS D G + +G+ + E
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYG-------SQIHGLCIKSEL 301
Query: 377 YG------CMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGH 421
G + D+ +R G + A + +P+ W ++ +G+
Sbjct: 302 AGNAIAGCSLCDMYARCGFLNSARRVFDQIE-RPDTASWNVIIAGLANNGY 351
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 301 bits (771), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 171/486 (35%), Positives = 270/486 (55%), Gaps = 51/486 (10%)
Query: 63 LKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGY 122
+KQ+HA +R GV D K L+ ++ L + YA +F +N F +N +I+ Y
Sbjct: 4 IKQLHAHCLRTGV-----DETKDLLQRLL-LIPNLVYARKLFDHHQNSCTFLYNKLIQAY 57
Query: 123 AESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLV 182
P ++ Y ++ + P HT+ F+ A + + R LHS ++GFES
Sbjct: 58 YVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDS 117
Query: 183 FVRNSLLHIYAACGDTESAHKVFESMTDR------------------------------- 211
F +L+ YA G A +VF+ M+ R
Sbjct: 118 FCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRK 177
Query: 212 -----------FALNGRPNEALTLFREMSAN-GVEPDGFTVVSLLSACAELGALELGRRV 259
F+ NG +EAL +F M + V+P+ TVVS+L ACA LG LE+GRR+
Sbjct: 178 NVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRL 237
Query: 260 HVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEM-EERNVVSWTTLIVGLAVNGF 318
Y + G +N++V NA +++Y+KCG I A+++F E+ +RN+ SW ++I LA +G
Sbjct: 238 EGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGK 297
Query: 319 GXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYG 378
+ P +TFVG+L AC H GM+ +G + F+ M+E + I+P++EHYG
Sbjct: 298 HDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYG 357
Query: 379 CMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPK 438
CM+DLL R G +++AY+ I+ MP++P+AV+W TLLGAC+ HG++ + EIA L KLEP
Sbjct: 358 CMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPT 417
Query: 439 HSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYS-LVELGNRVYEFTMGDRSHP 497
+ G+ V++SN+YA+ +W V +RK M ++ + K GYS VE+G V++FT+ D+SHP
Sbjct: 418 NPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHP 477
Query: 498 QSQDVY 503
+S ++Y
Sbjct: 478 RSYEIY 483
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 301 bits (771), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 169/499 (33%), Positives = 273/499 (54%), Gaps = 46/499 (9%)
Query: 51 SLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNP 110
S+L++ S +L +IH I G+ P + + L F+ +S S + YA+ + + +P
Sbjct: 12 SILRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDP 71
Query: 111 NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALH 170
+ WN +IRG++ S++P+ ++ Y QM + PD TYPFL+K+ S+ N + G +LH
Sbjct: 72 PNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLH 131
Query: 171 SVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE------------------------ 206
+K+G E +F+ N+L+H+Y + D SA K+F+
Sbjct: 132 CSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVV 191
Query: 207 ------------------SMTDRFALNGRPNEALTLFREMSANGV-EPDGFTVVSLLSAC 247
SM D + G N+AL +F +M G + + T+VS++ AC
Sbjct: 192 SARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICAC 251
Query: 248 AELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVF--GEMEERNVVS 305
A LGAL G+ VH Y+L L + + +L+D+YAKCGSI +A VF ++E + +
Sbjct: 252 AHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALM 311
Query: 306 WTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMK 365
W +I GLA +GF K+ P EITF+ +L ACSH G++ E + +F+ +K
Sbjct: 312 WNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLK 371
Query: 366 EEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLG 425
E G P+ EHY CMVD+LSRAGLVK A+++I MP++P + LL C HG+L L
Sbjct: 372 ES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELA 430
Query: 426 EIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNR 485
E L++L+P + G YV L+N+YA +++ +++R++M + GVKK G+S+++L
Sbjct: 431 ETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGT 490
Query: 486 VYEFTMGDRSHPQSQDVYA 504
+ F D++H S +YA
Sbjct: 491 RHRFIAHDKTHFHSDKIYA 509
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 182/550 (33%), Positives = 276/550 (50%), Gaps = 54/550 (9%)
Query: 42 LPHVLTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAH 101
P VLT C S+ S+ Q+H ++ G N + LI + + M A
Sbjct: 230 FPSVLTACASV-----SACRVGVQVHCCIVKSGFKT-NIYVQSALI-DMYAKCREMESAR 282
Query: 102 LVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKS- 160
+ + +V +WN+MI G AL + +M ++ D T P +L + S
Sbjct: 283 ALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSR 342
Query: 161 LNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFAL------ 214
++ + H + +K G+ + V N+L+ +YA G +SA KVFE M ++ +
Sbjct: 343 TEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALV 402
Query: 215 -----NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLR 269
NG +EAL LF M G+ PD S+LSA AEL LE G++VH +K+G
Sbjct: 403 TGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFP 462
Query: 270 ENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXX 329
+L V N+L+ +Y KCGS+ +A +F ME R++++WT LIVG A NG
Sbjct: 463 SSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNG------------ 510
Query: 330 XXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGL 389
+L++ YF M+ YGI P EHY CM+DL R+G
Sbjct: 511 -----------------------LLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGD 547
Query: 390 VKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNL 449
+ + + M V+P+A +W+ +L A HG++ GE A L++LEP ++ YV LSN+
Sbjct: 548 FVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNM 607
Query: 450 YASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXX 509
Y++ R + +R+ M + K PG S VE +V+ F DR HP+ ++Y+
Sbjct: 608 YSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEM 667
Query: 510 XXXXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVC 569
GY L D+++E KE L+YHSEK+A+AF LL G PIR++KNLRVC
Sbjct: 668 MLLIKEAGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVC 727
Query: 570 ADCHMAIKLI 579
DCH A+KL+
Sbjct: 728 GDCHSAMKLL 737
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 160/328 (48%), Gaps = 19/328 (5%)
Query: 109 NP--NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREG 166
NP N +WN +I GY +S A + + +M ++P+ +T +L+ + + + G
Sbjct: 85 NPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRG 144
Query: 167 EALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE------------SMTDRFAL 214
E +H TIK GF+ V V N LL +YA C A +FE SM ++
Sbjct: 145 EQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQ 204
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
NG +A+ FR++ G + + +T S+L+ACA + A +G +VH ++K+G + N++V
Sbjct: 205 NGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYV 264
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKL 334
+AL+D+YAKC + A+ + ME +VVSW ++IVG G + +
Sbjct: 265 QSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDM 324
Query: 335 APGEITFVGVL--YACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQ 392
+ T +L +A S M + +K Y + + +VD+ ++ G++
Sbjct: 325 KIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNN--ALVDMYAKRGIMDS 382
Query: 393 AYEYIQNMPVQPNAVIWRTLLGACTIHG 420
A + + M ++ + + W L+ T +G
Sbjct: 383 ALKVFEGM-IEKDVISWTALVTGNTHNG 409
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 298 bits (763), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 181/565 (32%), Positives = 295/565 (52%), Gaps = 45/565 (7%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
KQIH+ +I+ G + D+G L+ + SA A VF + +PNV +W T+I G
Sbjct: 345 KQIHSQTIKVGFE-DSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLV 403
Query: 124 ESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVF 183
+ + +M VEP+ T +L+A SK +VR +H+ ++ + +
Sbjct: 404 DHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMV 463
Query: 184 VRNSLLHIYAACGDTESAHKVFESM-----------TDRFALNGRPNEALTLFREMSANG 232
V NSL+ YA+ + A V SM RF G+ AL++ M +G
Sbjct: 464 VGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDG 523
Query: 233 VEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQ 292
+ D ++ +SA A LGALE G+ +H Y +K+G V+N+L+D+Y+KCGS+ +A+
Sbjct: 524 IRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAK 583
Query: 293 QVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCG 352
+VF E+ +VVSW L+ GLA NGF ++ P +TF+ +L ACS+
Sbjct: 584 KVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGR 643
Query: 353 MLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTL 412
+ D G +YF+ MK+ Y I P++EHY +V +L RAG +++A ++ M ++PNA+I++TL
Sbjct: 644 LTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTL 703
Query: 413 LGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVK 472
L AC G+LSLGE + L L P Y+LL++LY + Q R M + +
Sbjct: 704 LRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLS 763
Query: 473 KTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLADIEEE 532
K G S VE+ +V+ F S+DV V +T + A+IE
Sbjct: 764 KKLGKSTVEVQGKVHSFV--------SEDVTR--------------VDKTNGIYAEIESI 801
Query: 533 EKE-----------QALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISK 581
++E + S+HS K A+ + + +P P+ V+KN +C DCH + ++++
Sbjct: 802 KEEIKRFGSPYRGNENASFHSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTR 861
Query: 582 VYDREIVIRDRSRFHHFRGGKCSCK 606
+ D++I +RD ++ H F+ G+CSCK
Sbjct: 862 LVDKKITVRDGNQVHIFKNGECSCK 886
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 158/321 (49%), Gaps = 26/321 (8%)
Query: 103 VFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLN 162
+F+ ++N + +W MI ++ + AL FY +M + V P+ T+ LL A S L
Sbjct: 181 LFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGA-SSFLG 239
Query: 163 VREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR----------- 211
+ G+ +HS I G V ++ SL+ Y+ E A +V S ++
Sbjct: 240 LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSG 299
Query: 212 FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLREN 271
F N R EA+ F EM + G++P+ FT ++LS C+ + +L+ G+++H +K G ++
Sbjct: 300 FVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDS 359
Query: 272 LHVVNALLDLYAKC-GSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXX 330
V NAL+D+Y KC S EA +VFG M NVVSWTTLI+GL +GF
Sbjct: 360 TDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMV 419
Query: 331 XQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCM------VDLL 384
+++ P +T GVL ACS + RR+ E + R G M VD
Sbjct: 420 KREVEPNVVTLSGVLRACSK-------LRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAY 472
Query: 385 SRAGLVKQAYEYIQNMPVQPN 405
+ + V A+ I++M + N
Sbjct: 473 ASSRKVDYAWNVIRSMKRRDN 493
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 178/395 (45%), Gaps = 16/395 (4%)
Query: 40 NPLPHVLTKCISLLQYCASSKHKLK-QIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMS 98
N L ++ CI +L +C S+ ++ IH I+ G+ L N D+ +L+ ++ + +
Sbjct: 18 NELGNLQKSCIRILSFCESNSSRIGLHIHCPVIKFGL-LENLDLCNNLL-SLYLKTDGIW 75
Query: 99 YAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVS 158
A +F + + VF W MI + +SQ+ AL + +M S P+ T+ ++++ +
Sbjct: 76 NARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCA 135
Query: 159 KSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNG-- 216
++ G +H IK GFE V +SL +Y+ CG + A ++F S+ + ++
Sbjct: 136 GLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTM 195
Query: 217 ---------RPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAG 267
+ EAL + EM GV P+ FT V LL A + LG LE G+ +H ++ G
Sbjct: 196 MISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRG 254
Query: 268 LRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXX 327
+ N+ + +L+D Y++ + +A +V E++V WT+++ G N
Sbjct: 255 IPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFL 314
Query: 328 XXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRA 387
L P T+ +L CS LD G + G + +VD+ +
Sbjct: 315 EMRSLGLQPNNFTYSAILSLCSAVRSLDFG-KQIHSQTIKVGFEDSTDVGNALVDMYMKC 373
Query: 388 GLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHL 422
+ + V PN V W TL+ HG +
Sbjct: 374 SASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFV 408
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 171/470 (36%), Positives = 257/470 (54%), Gaps = 52/470 (11%)
Query: 58 SSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMS---YAHLVFTMIRNPNVFT 114
+++ +L +IHA +RH LH ++ L+ +S+ +S YA+ VF+ I+NPNV
Sbjct: 15 NTRTRLPEIHAHLLRH--FLHGSNL---LLAHFISICGSLSNSDYANRVFSHIQNPNVLV 69
Query: 115 WNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTI 174
+N MI+ Y+ P +L F+ M + D +TY LLK+ S ++R G+ +H I
Sbjct: 70 FNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELI 129
Query: 175 KNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR----------------------- 211
+ GF L +R ++ +Y + G A KVF+ M++R
Sbjct: 130 RTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLH 189
Query: 212 -------------------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGA 252
+ GR EAL LF EM G +PD TVV++L A LG
Sbjct: 190 LFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGV 249
Query: 253 LELGRRVHVYLLKAGL-RENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIV 311
L+ G+ +H +GL ++ + V NAL+D Y K G + A +F +M+ RNVVSW TLI
Sbjct: 250 LDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLIS 309
Query: 312 GLAVNGFGXXXXXXXXXXXXQ-KLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGI 370
G AVNG G + K+AP E TF+GVL CS+ G ++ G + F M E + +
Sbjct: 310 GSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKL 369
Query: 371 APRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARS 430
R EHYG MVDL+SR+G + +A+++++NMPV NA +W +LL AC HG + L E+A
Sbjct: 370 EARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAM 429
Query: 431 HLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLV 480
L+K+EP +SG+YVLLSNLYA E RW DV+ +R M ++ ++K+ G S +
Sbjct: 430 ELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 163/504 (32%), Positives = 263/504 (52%), Gaps = 51/504 (10%)
Query: 51 SLLQYCASSKHKLKQIHAFSIRHGVP-LHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRN 109
S+L C+ K + S+ P L + +G L+ + S ++ A VF + +
Sbjct: 157 SVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALV-DMYSKCGNVNDAQRVFDEMGD 215
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
NV +WN++I + ++ AL ++ M S VEPD T ++ A + ++ G+ +
Sbjct: 216 RNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEV 275
Query: 170 HSVTIKNG-FESLVFVRNSLLHIYAACGDTESAHKVFESMTDR----------------- 211
H +KN + + + N+ + +YA C + A +F+SM R
Sbjct: 276 HGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAS 335
Query: 212 -------------------------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSA 246
+ NG EAL+LF + V P ++ ++L A
Sbjct: 336 TKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKA 395
Query: 247 CAELGALELGRRVHVYLLKAGLR------ENLHVVNALLDLYAKCGSIREAQQVFGEMEE 300
CA+L L LG + HV++LK G + +++ V N+L+D+Y KCG + E VF +M E
Sbjct: 396 CADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMME 455
Query: 301 RNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDY 360
R+ VSW +I+G A NG+G P IT +GVL AC H G ++EG Y
Sbjct: 456 RDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHY 515
Query: 361 FRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHG 420
F M ++G+AP +HY CMVDLL RAG +++A I+ MP+QP++VIW +LL AC +H
Sbjct: 516 FSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHR 575
Query: 421 HLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLV 480
+++LG+ LL++EP +SG YVLLSN+YA +W DV +RKSM ++GV K PG S +
Sbjct: 576 NITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWI 635
Query: 481 ELGNRVYEFTMGDRSHPQSQDVYA 504
++ + F + D+SHP+ + +++
Sbjct: 636 KIQGHDHVFMVKDKSHPRKKQIHS 659
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 170/362 (46%), Gaps = 61/362 (16%)
Query: 114 TWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVT 173
TWN+M+ G+A+ + AL ++ M + +++ +L A S ++ +G +HS+
Sbjct: 119 TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLI 178
Query: 174 IKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEAL 222
K+ F S V++ ++L+ +Y+ CG+ A +VF+ M DR F NG EAL
Sbjct: 179 AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEAL 238
Query: 223 TLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAG-LRENLHVVNALLDL 281
+F+ M + VEPD T+ S++SACA L A+++G+ VH ++K LR ++ + NA +D+
Sbjct: 239 DVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDM 298
Query: 282 YAKCGSIREAQQVFG-------------------------------EMEERNVVSWTTLI 310
YAKC I+EA+ +F +M ERNVVSW LI
Sbjct: 299 YAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALI 358
Query: 311 VGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACS-----HCGM------LDEGFD 359
G NG + + P +F +L AC+ H GM L GF
Sbjct: 359 AGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFK 418
Query: 360 YFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIH 419
+ + G I ++D+ + G V++ Y + M ++ + V W ++ +
Sbjct: 419 F------QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIGFAQN 471
Query: 420 GH 421
G+
Sbjct: 472 GY 473
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 137/302 (45%), Gaps = 45/302 (14%)
Query: 147 THTYPF--LLKAVSKS-LNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHK 203
T + PF LL + KS L+ +H+ IK+GF + +F++N L+ Y+ CG E +
Sbjct: 17 TDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQ 76
Query: 204 VFESMTDR------------------------------------------FALNGRPNEA 221
VF+ M R FA + R EA
Sbjct: 77 VFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEA 136
Query: 222 LTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDL 281
L F M G + ++ S+LSAC+ L + G +VH + K+ ++++ +AL+D+
Sbjct: 137 LCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDM 196
Query: 282 YAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITF 341
Y+KCG++ +AQ+VF EM +RNVVSW +LI NG ++ P E+T
Sbjct: 197 YSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTL 256
Query: 342 VGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMP 401
V+ AC+ + G + R+ + + I VD+ ++ +K+A +MP
Sbjct: 257 ASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Query: 402 VQ 403
++
Sbjct: 317 IR 318
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 156/452 (34%), Positives = 247/452 (54%), Gaps = 15/452 (3%)
Query: 65 QIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAE 124
Q HA ++ G+ +P + LI + S S +A +F + +V TW MI G+
Sbjct: 124 QFHAHIVKFGLD-SDPFVRNSLI-SGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVR 181
Query: 125 SQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNG-FESLVF 183
+ A+ ++ +M + V + T +LKA K +VR G ++H + ++ G + VF
Sbjct: 182 NGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVF 241
Query: 184 VRNSLLHIYAACGDTESAHKVFESMTDRFALNGRP-----------NEALTLFREMSANG 232
+ +SL+ +Y C + A KVF+ M R + ++ + +F EM +
Sbjct: 242 IGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSD 301
Query: 233 VEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQ 292
V P+ T+ S+LSACA +GAL GRRVH Y++K + N L+DLY KCG + EA
Sbjct: 302 VAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAI 361
Query: 293 QVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCG 352
VF + E+NV +WT +I G A +G+ ++P E+TF+ VL AC+H G
Sbjct: 362 LVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGG 421
Query: 353 MLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTL 412
+++EG F MK + + P+ +HY CMVDL R GL+++A I+ MP++P V+W L
Sbjct: 422 LVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGAL 481
Query: 413 LGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVK 472
G+C +H LG+ A S ++KL+P HSG Y LL+NLY+ + W +V +RK M V
Sbjct: 482 FGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVV 541
Query: 473 KTPGYSLVELGNRVYEFTMGDRSHP-QSQDVY 503
K+PG+S +E+ ++ EF D P +S D+Y
Sbjct: 542 KSPGFSWIEVKGKLCEFIAFDDKKPLESDDLY 573
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 175/378 (46%), Gaps = 26/378 (6%)
Query: 63 LKQIHAFSIRHGVPLHNPDMG-KHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRG 121
LKQIH + + D+ L+ + + YA + ++ ++ W+++I
Sbjct: 17 LKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLIGH 76
Query: 122 YAESQDPKPALHF--YRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFE 179
++ L F YR M + V P HT+P LLKAV K L H+ +K G +
Sbjct: 77 FSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFK-LRDSNPFQFHAHIVKFGLD 135
Query: 180 SLVFVRNSLLHIYAACGDTESAHKVFE-----------SMTDRFALNGRPNEALTLFREM 228
S FVRNSL+ Y++ G + A ++F+ +M D F NG +EA+ F EM
Sbjct: 136 SDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEM 195
Query: 229 SANGVEPDGFTVVSLLSACAELGALELGRRVH-VYLLKAGLRENLHVVNALLDLYAKCGS 287
GV + TVVS+L A ++ + GR VH +YL ++ ++ + ++L+D+Y KC
Sbjct: 196 KKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSC 255
Query: 288 IREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYA 347
+AQ+VF EM RNVV+WT LI G + +AP E T VL A
Sbjct: 256 YDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSA 315
Query: 348 CSHCGMLDEGFDYFRRMKEEYGIAPRIE----HYGCMVDLLSRAGLVKQAYEYIQNMPVQ 403
C+H G L G R Y I IE ++DL + G +++A + + +
Sbjct: 316 CAHVGALHRG-----RRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLH-E 369
Query: 404 PNAVIWRTLLGACTIHGH 421
N W ++ HG+
Sbjct: 370 KNVYTWTAMINGFAAHGY 387
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 183/458 (39%), Positives = 248/458 (54%), Gaps = 38/458 (8%)
Query: 48 KCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGK--HLIFTIVSLSAPMSYAHLVFT 105
+C++L+ C S ++ LKQIHA I G+ H + K HL T+ +SYA +
Sbjct: 11 RCLNLISKCKSLQN-LKQIHAQIITIGLSHHTYPLSKLLHLSSTVC-----LSYALSILR 64
Query: 106 MIRNPNVFTWNTMIRGYAESQDPKP---ALHFYRQMTMS---CVEPDTHTYPFLLKAVSK 159
I NP+VF +NT+I + + A Y Q+ S V P+ TYP L KA
Sbjct: 65 QIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGF 124
Query: 160 SLNV-REGEALHSVTIKNGFESLV----FVRNSLLHIYAACGDTESAHKVFESM------ 208
R G ALH+ +K F V FV+ +L+ YA CG A +FE +
Sbjct: 125 DAQWHRHGRALHAHVLK--FLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLA 182
Query: 209 TDRFALNGRPN--------EALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVH 260
T L N E L LF M V P+ ++V+L+ +CA LG G H
Sbjct: 183 TWNTLLAAYANSEEIDSDEEVLLLFMRMQ---VRPNELSLVALIKSCANLGEFVRGVWAH 239
Query: 261 VYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGX 320
VY+LK L N V +L+DLY+KCG + A++VF EM +R+V + +I GLAV+GFG
Sbjct: 240 VYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQ 299
Query: 321 XXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCM 380
Q L P TFV + ACSH G++DEG F MK YGI P++EHYGC+
Sbjct: 300 EGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCL 359
Query: 381 VDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHS 440
VDLL R+G +++A E I+ MPV+PNA +WR+ LG+ HG GEIA HLL LE ++S
Sbjct: 360 VDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENS 419
Query: 441 GDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYS 478
G+YVLLSN+YA RWTDV+ R+ M V K+PG S
Sbjct: 420 GNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 146/382 (38%), Positives = 223/382 (58%), Gaps = 13/382 (3%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P F WN ++R Y + P A+ Y M S V PD ++ P ++KA + + G+ L
Sbjct: 80 PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKEL 139
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------FALN--GRP 218
HSV ++ GF F + + +Y G+ E+A KVF+ +R LN GR
Sbjct: 140 HSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRA 199
Query: 219 NEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRE--NLHVVN 276
NEA+ +F +M +G+EPD FT+VS+ ++C LG L L ++H +L+A E ++ ++N
Sbjct: 200 NEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLN 259
Query: 277 ALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAP 336
+L+D+Y KCG + A +F EM +RNVVSW+++IVG A NG + P
Sbjct: 260 SLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRP 319
Query: 337 GEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEY 396
+ITFVGVL AC H G+++EG YF MK E+ + P + HYGC+VDLLSR G +K+A +
Sbjct: 320 NKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKV 379
Query: 397 IQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRW 456
++ MP++PN ++W L+G C G + + E ++++LEP + G YV+L+N+YA W
Sbjct: 380 VEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMW 439
Query: 457 TDVQTIRKSMLQDGVKKTPGYS 478
DV+ +RK M V K P YS
Sbjct: 440 KDVERVRKLMKTKKVAKIPAYS 461
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 155/474 (32%), Positives = 248/474 (52%), Gaps = 13/474 (2%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
K IHA +I G +G LI + +S VF + + NV T +I G
Sbjct: 175 KMIHALAILSGYD-KEISVGNKLITSYFKCGCSVS-GRGVFDGMSHRNVITLTAVISGLI 232
Query: 124 ESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVF 183
E++ + L + M V P++ TY L A S S + EG+ +H++ K G ES +
Sbjct: 233 ENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELC 292
Query: 184 VRNSLLHIYAACGDTESAHKVFESMTD-----------RFALNGRPNEALTLFREMSANG 232
+ ++L+ +Y+ CG E A +FES T+ A NG EA+ F M G
Sbjct: 293 IESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAG 352
Query: 233 VEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQ 292
VE D V ++L +L LG+++H ++K N V N L+++Y+KCG + ++Q
Sbjct: 353 VEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQ 412
Query: 293 QVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCG 352
VF M +RN VSW ++I A +G G ++ P ++TF+ +L+ACSH G
Sbjct: 413 TVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVG 472
Query: 353 MLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTL 412
++D+G + MKE +GI PR EHY C++D+L RAGL+K+A +I ++P++P+ IW+ L
Sbjct: 473 LIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQAL 532
Query: 413 LGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVK 472
LGAC+ HG +GE A L + P S ++L++N+Y+S +W + K M GV
Sbjct: 533 LGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVT 592
Query: 473 KTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVL 526
K G S +E+ ++ + F + D+ HPQ++ +Y GY P +L
Sbjct: 593 KETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRPDKRFIL 646
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 153/390 (39%), Gaps = 72/390 (18%)
Query: 145 PDTHTYPFLLKAVSKSLNV----REG------EALHSVTIKNG--FESL--------VFV 184
P+ FLL V SL + REG LH+ IKN FE + + V
Sbjct: 33 PNYQVSTFLLNHVDMSLLLSICGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVV 92
Query: 185 RNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMSANGV 233
NSLL +YA CG A K+F+ M R F N L + M +G
Sbjct: 93 WNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG- 151
Query: 234 EPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQ 293
D T+ +LS C + + +H + +G + + V N L+ Y KCG +
Sbjct: 152 GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRG 211
Query: 294 VFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGM 353
VF M RNV++ T +I GL N + P +T++ L ACS
Sbjct: 212 VFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQR 271
Query: 354 LDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAY------------------- 394
+ EG + +YGI + ++D+ S+ G ++ A+
Sbjct: 272 IVEG-QQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILV 330
Query: 395 ---------EYIQ------NMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKH 439
E IQ V+ +A + +LG I L LG+ + H L ++ K
Sbjct: 331 GLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGK--QLHSLVIKRKF 388
Query: 440 SGDYVL---LSNLYASERRWTDVQTIRKSM 466
SG+ + L N+Y+ TD QT+ + M
Sbjct: 389 SGNTFVNNGLINMYSKCGDLTDSQTVFRRM 418
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 168/539 (31%), Positives = 269/539 (49%), Gaps = 22/539 (4%)
Query: 93 LSAPMSYAHL-----VFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDT 147
++A MS+ + +F + N T+N ++ G+ + AL + M VE
Sbjct: 358 ITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTD 417
Query: 148 HTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE- 206
+ + A + E +H IK G ++ +LL + C A ++F+
Sbjct: 418 FSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQ 477
Query: 207 ------------SMTDRFALNGRPNEALTLF-REMSANGVEPDGFTVVSLLSACAELGAL 253
S+ +A NG P++A++LF R + + D ++ +L+ C LG
Sbjct: 478 WPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFR 537
Query: 254 ELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGL 313
E+G ++H Y LKAG ++ + N+L+ +YAKC +A ++F M E +V+SW +LI
Sbjct: 538 EMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCY 597
Query: 314 AVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYAC--SHCGMLDEGFDYFRRMKEEYGIA 371
+ G +++ P IT V+ A + L D F MK Y I
Sbjct: 598 ILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIE 657
Query: 372 PRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSH 431
P EHY V +L GL+++A + I +MPVQP + R LL +C IH + S+ +
Sbjct: 658 PTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKL 717
Query: 432 LLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTM 491
+L +P+ +Y+L SN+Y++ W + IR+ M + G +K P S + N+++ F
Sbjct: 718 ILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHA 777
Query: 492 GDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFML 551
D SHPQ +D+Y GY P TE VL +++E K+ L +HS K+A+ + +
Sbjct: 778 RDTSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGI 837
Query: 552 LNT-APGTPIRVMKNLRVCADCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
L++ G P+RVMKN+ +C DCH K IS V REIV+RD S FHHF GKCSC+D W
Sbjct: 838 LSSNTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 161/378 (42%), Gaps = 72/378 (19%)
Query: 82 MGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALH-FYRQMTM 140
+G LI T + L P A LVF + +P V ++ +I G++ AL F+R
Sbjct: 116 LGNALISTYLKLGFPRE-AILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKA 174
Query: 141 SCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIY-----AAC 195
V+P+ +T+ +L A + G +H + +K+GF + VFV NSL+ +Y ++C
Sbjct: 175 GLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSC 234
Query: 196 GDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMS-ANGVEPDGFTVVSL 243
D K+F+ + R G+ ++A LF EM+ G D FT+ +L
Sbjct: 235 DD---VLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTL 291
Query: 244 LSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAK------------------- 284
LS+C + L GR +H ++ GL + L V NAL+ Y+K
Sbjct: 292 LSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDA 351
Query: 285 ------------CGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQ 332
G + A ++F + E+N +++ L+ G NG G +
Sbjct: 352 VTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQR 411
Query: 333 KLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEE-------YGIA--PRIEHYGCMVDL 383
+ E+T + A CG++ E +++ E+ +G A P I+ ++D+
Sbjct: 412 GV---ELTDFSLTSAVDACGLVSE-----KKVSEQIHGFCIKFGTAFNPCIQ--TALLDM 461
Query: 384 LSRAGLVKQAYEYIQNMP 401
+R + A E P
Sbjct: 462 CTRCERMADAEEMFDQWP 479
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 150/451 (33%), Positives = 244/451 (54%), Gaps = 42/451 (9%)
Query: 95 APMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLL 154
M A VF ++ +WN +I GY + + + A++ Y+ M V+PD T L+
Sbjct: 205 GDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLV 264
Query: 155 KAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR--- 211
+ S ++ G+ + +NG + + N+L+ +++ CGD A ++F+++ R
Sbjct: 265 SSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIV 324
Query: 212 --------FALNG-------------------------------RPNEALTLFREMSANG 232
+A G R +AL LF+EM +
Sbjct: 325 SWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSN 384
Query: 233 VEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQ 292
+PD T++ LSAC++LGAL++G +H Y+ K L N+ + +L+D+YAKCG+I EA
Sbjct: 385 TKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEAL 444
Query: 293 QVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCG 352
VF ++ RN +++T +I GLA++G +AP EITF+G+L AC H G
Sbjct: 445 SVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGG 504
Query: 353 MLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTL 412
M+ G DYF +MK + + P+++HY MVDLL RAGL+++A +++MP++ +A +W L
Sbjct: 505 MIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGAL 564
Query: 413 LGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVK 472
L C +HG++ LGE A LL+L+P SG YVLL +Y W D + R+ M + GV+
Sbjct: 565 LFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVE 624
Query: 473 KTPGYSLVELGNRVYEFTMGDRSHPQSQDVY 503
K PG S +E+ V EF + D+S P+S+ +Y
Sbjct: 625 KIPGCSSIEVNGIVCEFIVRDKSRPESEKIY 655
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/429 (30%), Positives = 209/429 (48%), Gaps = 55/429 (12%)
Query: 40 NPLPHVLTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSY 99
NPL +L KC LL LKQI A I +G+ L + + F +S S + Y
Sbjct: 54 NPLLSLLEKCKLLLH--------LKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDY 105
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTM-SCVE--PDTHTYPFLLKA 156
+ + I NPN+F+WN IRG++ES++PK + Y+QM C E PD TYP L K
Sbjct: 106 SVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKV 165
Query: 157 VSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFES--MTDRFAL 214
+ G + +K E + V N+ +H++A+CGD E+A KVF+ + D +
Sbjct: 166 CADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSW 225
Query: 215 N---------GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLK 265
N G +A+ +++ M + GV+PD T++ L+S+C+ LG L G+ + Y+ +
Sbjct: 226 NCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKE 285
Query: 266 AGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGF------- 318
GLR + +VNAL+D+++KCG I EA+++F +E+R +VSWTT+I G A G
Sbjct: 286 NGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKL 345
Query: 319 ------------------------GXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGML 354
G P EIT + L ACS G L
Sbjct: 346 FDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGAL 405
Query: 355 DEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLG 414
D G + R E+Y ++ + +VD+ ++ G + +A + + N++ + ++G
Sbjct: 406 DVGI-WIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIG 463
Query: 415 ACTIHGHLS 423
+HG S
Sbjct: 464 GLALHGDAS 472
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 8/230 (3%)
Query: 212 FALNGRPNEALTLFREMSANGV---EPDGFTVVSLLSACAELGALELGRRVHVYLLKAGL 268
F+ + P E+ L+++M +G PD FT L CA+L LG + ++LK L
Sbjct: 128 FSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRL 187
Query: 269 RENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXX 328
HV NA + ++A CG + A++VF E R++VSW LI G G
Sbjct: 188 ELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKL 247
Query: 329 XXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAG 388
+ + P ++T +G++ +CS G L+ G +++ +KE G+ I ++D+ S+ G
Sbjct: 248 MESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN-GLRMTIPLVNALMDMFSKCG 306
Query: 389 LVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPK 438
+ +A N+ + V W T++ + L +++R +E K
Sbjct: 307 DIHEARRIFDNLE-KRTIVSWTTMISG---YARCGLLDVSRKLFDDMEEK 352
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 160/488 (32%), Positives = 255/488 (52%), Gaps = 23/488 (4%)
Query: 64 KQIHAFSIRHG----VPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMI 119
+QIH +I++G V L N + T+ S ++ A +F + N TW+ M+
Sbjct: 241 RQIHCITIKNGLLGFVALSNA------LVTMYSKCESLNEACKMFDSSGDRNSITWSAMV 294
Query: 120 RGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFE 179
GY+++ + A+ + +M + ++P +T +L A S + EG+ LHS +K GFE
Sbjct: 295 TGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFE 354
Query: 180 SLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREM 228
+F +L+ +YA G A K F+ + +R + N EAL L+R M
Sbjct: 355 RHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRM 414
Query: 229 SANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSI 288
G+ P+ T+ S+L AC+ L LELG++VH + +K G + + +AL +Y+KCGS+
Sbjct: 415 KTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSL 474
Query: 289 REAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYAC 348
+ VF ++VVSW +I GL+ NG G + + P ++TFV ++ AC
Sbjct: 475 EDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISAC 534
Query: 349 SHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVI 408
SH G ++ G+ YF M ++ G+ P+++HY CMVDLLSRAG +K+A E+I++ + +
Sbjct: 535 SHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCL 594
Query: 409 WRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQ 468
WR LL AC HG LG A L+ L + S YV LS +Y + R DV+ + K M
Sbjct: 595 WRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRA 654
Query: 469 DGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLAD 528
+GV K G S +EL N+ + F +GD HP ++ G+V ++
Sbjct: 655 NGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFVTVLDSSF-- 712
Query: 529 IEEEEKEQ 536
+EEEE Q
Sbjct: 713 VEEEEGTQ 720
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 169/391 (43%), Gaps = 53/391 (13%)
Query: 95 APMSYAHLVFTMIRNPNVFTWNTMIRGYAES---QDPKPALHFYRQMTMSCVEPDTHTYP 151
++ AH +F I +V +WN++I GY+++ + +R+M + P+ +T
Sbjct: 63 GKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLA 122
Query: 152 FLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR 211
+ KA S + G H++ +K ++V SL+ +Y G E KVF M +R
Sbjct: 123 GIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPER 182
Query: 212 -----------FALNGRPNEAL---TLFREMSANGVEPDGFTVVSLLSACAELGALELGR 257
+A GR EA+ LF G + D + ++LS+ A + LGR
Sbjct: 183 NTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIYVGLGR 241
Query: 258 RVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNG 317
++H +K GL + + NAL+ +Y+KC S+ EA ++F +RN ++W+ ++ G + NG
Sbjct: 242 QIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNG 301
Query: 318 FGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHY 377
+ P E T VGVL ACS L+EG + G +
Sbjct: 302 ESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEG-KQLHSFLLKLGFERHLFAT 360
Query: 378 GCMVDLLSRAGLVKQAYE-------------------YIQNMPVQPNAVIWR-------- 410
+VD+ ++AG + A + Y+QN + +++R
Sbjct: 361 TALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGII 420
Query: 411 -------TLLGACTIHGHLSLGEIARSHLLK 434
++L AC+ L LG+ H +K
Sbjct: 421 PNDPTMASVLKACSSLATLELGKQVHGHTIK 451
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 94/191 (49%), Gaps = 16/191 (8%)
Query: 143 VEPDTHTYPFLLKAV--SKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTES 200
E + HT L K S+ N+ G A+H I+ G + + N L++ YA CG
Sbjct: 8 TELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAK 67
Query: 201 AHKVFE-----------SMTDRFALNGRPNEALT---LFREMSANGVEPDGFTVVSLLSA 246
AH +F S+ ++ NG + + T LFREM A + P+ +T+ + A
Sbjct: 68 AHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA 127
Query: 247 CAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSW 306
+ L + +GR+ H ++K +++V +L+ +Y K G + + +VF M ERN +W
Sbjct: 128 ESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTW 187
Query: 307 TTLIVGLAVNG 317
+T++ G A G
Sbjct: 188 STMVSGYATRG 198
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 282 bits (722), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 161/461 (34%), Positives = 248/461 (53%), Gaps = 28/461 (6%)
Query: 63 LKQIHAFSIRHGVPLHNPDMGKHLIFTIVSL---SAPMSYAHLVFTMIR--NPNVFTWNT 117
L+ +HA IR GV D+ + T +S + A LVF I + V +WN+
Sbjct: 172 LEAMHAVGIRLGV-----DVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNS 226
Query: 118 MIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNG 177
M + Y+ + A Y M +PD T+ L + + +G +HS I G
Sbjct: 227 MFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLG 286
Query: 178 FESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFR 226
+ + N+ + +Y+ DT SA +F+ MT R +A G +EAL LF
Sbjct: 287 TDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFH 346
Query: 227 EMSANGVEPDGFTVVSLLSACAELGALELGR----RVHVYLLKAGLRENLHVVNALLDLY 282
M +G +PD T++SL+S C + G+LE G+ R +Y K R+N+ + NAL+D+Y
Sbjct: 347 AMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCK---RDNVMICNALIDMY 403
Query: 283 AKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFV 342
+KCGSI EA+ +F E+ VV+WTT+I G A+NG P ITF+
Sbjct: 404 SKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFL 463
Query: 343 GVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPV 402
VL AC+H G L++G++YF MK+ Y I+P ++HY CMVDLL R G +++A E I+NM
Sbjct: 464 AVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSA 523
Query: 403 QPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTI 462
+P+A IW LL AC IH ++ + E A L LEP+ + YV ++N+YA+ W I
Sbjct: 524 KPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARI 583
Query: 463 RKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVY 503
R M Q +KK PG S++++ + + FT+G+ H +++ +Y
Sbjct: 584 RSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIY 624
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 154/347 (44%), Gaps = 34/347 (9%)
Query: 97 MSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKA 156
+ YA VF + + TWN M+ G+ +S A +R+M ++ + PD+ T L+++
Sbjct: 103 VDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQS 162
Query: 157 VSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE---------- 206
S +++ EA+H+V I+ G + V V N+ + Y CGD +SA VFE
Sbjct: 163 ASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVV 222
Query: 207 ---SMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYL 263
SM +++ G +A L+ M +PD T ++L ++C L GR +H +
Sbjct: 223 SWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHA 282
Query: 264 LKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXX 323
+ G +++ +N + +Y+K A+ +F M R VSWT +I G A G
Sbjct: 283 IHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEAL 342
Query: 324 XXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGC---- 379
P +T + ++ C G L+ G I R + YGC
Sbjct: 343 ALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG----------KWIDARADIYGCKRDN 392
Query: 380 ------MVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHG 420
++D+ S+ G + +A + N P + V W T++ ++G
Sbjct: 393 VMICNALIDMYSKCGSIHEARDIFDNTP-EKTVVTWTTMIAGYALNG 438
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 127/260 (48%), Gaps = 13/260 (5%)
Query: 111 NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALH 170
+V WN IR DP +L +R+M EP+ T+PF+ KA ++ +V E +H
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 171 SVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPN 219
+ IK+ F S VFV + + ++ C + A KVFE M +R F +G +
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD 135
Query: 220 EALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALL 279
+A +LFREM N + PD TV++L+ + + +L+L +H ++ G+ + V N +
Sbjct: 136 KAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWI 195
Query: 280 DLYAKCGSIREAQQVFGEME--ERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPG 337
Y KCG + A+ VF ++ +R VVSW ++ +V G ++ P
Sbjct: 196 STYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPD 255
Query: 338 EITFVGVLYACSHCGMLDEG 357
TF+ + +C + L +G
Sbjct: 256 LSTFINLAASCQNPETLTQG 275
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 280 bits (715), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 145/417 (34%), Positives = 231/417 (55%), Gaps = 52/417 (12%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A +F + ++ +WNTM+ GYA ++ A + +M P+ +T +
Sbjct: 204 ARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKM------PERNTVSW------- 250
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESM----------- 208
++++ Y+ GD E A +F+ M
Sbjct: 251 --------------------------STMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWT 284
Query: 209 --TDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKA 266
+A G EA L +M A+G++ D V+S+L+AC E G L LG R+H L ++
Sbjct: 285 IIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRS 344
Query: 267 GLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXX 326
L N +V+NALLD+YAKCG++++A VF ++ ++++VSW T++ GL V+G G
Sbjct: 345 NLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELF 404
Query: 327 XXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSR 386
+ + P ++TF+ VL +C+H G++DEG DYF M++ Y + P++EHYGC+VDLL R
Sbjct: 405 SRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGR 464
Query: 387 AGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLL 446
G +K+A + +Q MP++PN VIW LLGAC +H + + + +L+KL+P G+Y LL
Sbjct: 465 VGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLL 524
Query: 447 SNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVY 503
SN+YA+ W V IR M GV+K G S VEL + ++EFT+ D+SHP+S +Y
Sbjct: 525 SNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIY 581
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 174/411 (42%), Gaps = 75/411 (18%)
Query: 46 LTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFT 105
L KC +L +++KQ+HA IR LH + + +SL + A VF
Sbjct: 26 LPKCANL--------NQVKQLHAQIIRRN--LHEDLHIAPKLISALSLCRQTNLAVRVFN 75
Query: 106 MIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVRE 165
++ PNV N++IR +A++ P A + +M + D TYPFLLKA S +
Sbjct: 76 QVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPV 135
Query: 166 GEALHSVTIKNGFESLVFVRNSLLHIYAACG--DTESAHKVFESMTDRFALNGRPNEALT 223
+ +H+ K G S ++V N+L+ Y+ CG A K+FE M++R
Sbjct: 136 VKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER------------ 183
Query: 224 LFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYA 283
D + S+L + G L RR L + +L N +LD YA
Sbjct: 184 ------------DTVSWNSMLGGLVKAGELRDARR----LFDEMPQRDLISWNTMLDGYA 227
Query: 284 KCGSIREAQQVFGEMEERNVVSWTTLIVG----------------------------LAV 315
+C + +A ++F +M ERN VSW+T+++G + +
Sbjct: 228 RCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIII 287
Query: 316 NGFGXXXXXXXXXXXXQKLAPGEITF-----VGVLYACSHCGMLDEGFDYFRRMKEEYGI 370
G+ ++ + F + +L AC+ G+L G +K +
Sbjct: 288 AGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRS-NL 346
Query: 371 APRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGH 421
++D+ ++ G +K+A++ ++P + + V W T+L +HGH
Sbjct: 347 GSNAYVLNALLDMYAKCGNLKKAFDVFNDIP-KKDLVSWNTMLHGLGVHGH 396
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 130/283 (45%), Gaps = 23/283 (8%)
Query: 154 LKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVF-------- 205
L+ + K N+ + + LH+ I+ + + L+ + C T A +VF
Sbjct: 23 LQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 206 ---ESMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVY 262
S+ A N +P +A +F EM G+ D FT LL AC+ L + + +H +
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 263 LLKAGLRENLHVVNALLDLYAKCG--SIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGX 320
+ K GL +++V NAL+D Y++CG +R+A ++F +M ER+ VSW +++ GL G
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELR 202
Query: 321 XXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCM 380
+ L I++ +L + C + + F+ F +M E ++ + M
Sbjct: 203 DARRLFDEMPQRDL----ISWNTMLDGYARCREMSKAFELFEKMPERNTVS-----WSTM 253
Query: 381 VDLLSRAGLVKQAYEYIQNMPV-QPNAVIWRTLLGACTIHGHL 422
V S+AG ++ A MP+ N V W ++ G L
Sbjct: 254 VMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLL 296
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 278 bits (711), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 156/452 (34%), Positives = 256/452 (56%), Gaps = 18/452 (3%)
Query: 65 QIHAFSIRHGVPLHNPDMGKHLI--FTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGY 122
++HA+ I+HG N +G LI ++ +L+ M A F + + ++ +W T+I GY
Sbjct: 407 ELHAYVIKHGWD-SNLQVGNTLIDMYSKCNLTCYMGRA---FLRMHDKDLISWTTVIAGY 462
Query: 123 AESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLV 182
A++ AL +R + +E D +L+A S ++ + +H ++ G V
Sbjct: 463 AQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV 522
Query: 183 FVRNSLLHIYAACGDTESAHKVFES-----------MTDRFALNGRPNEALTLFREMSAN 231
++N L+ +Y C + A +VFES M ALNG +EA+ LFR M
Sbjct: 523 -IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVET 581
Query: 232 GVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREA 291
G+ D ++ +LSA A L AL GR +H YLL+ G + A++D+YA CG ++ A
Sbjct: 582 GLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSA 641
Query: 292 QQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHC 351
+ VF +E + ++ +T++I ++G G + ++P I+F+ +LYACSH
Sbjct: 642 KAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHA 701
Query: 352 GMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRT 411
G+LDEG + + M+ EY + P EHY C+VD+L RA V +A+E+++ M +P A +W
Sbjct: 702 GLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCA 761
Query: 412 LLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGV 471
LL AC H +GEIA LL+LEPK+ G+ VL+SN++A + RW DV+ +R M G+
Sbjct: 762 LLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGM 821
Query: 472 KKTPGYSLVELGNRVYEFTMGDRSHPQSQDVY 503
+K PG S +E+ +V++FT D+SHP+S+++Y
Sbjct: 822 EKHPGCSWIEMDGKVHKFTARDKSHPESKEIY 853
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 126/230 (54%), Gaps = 13/230 (5%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A VF + + F WNTMI Y + +P AL Y M + V ++P LLKA +K
Sbjct: 135 AEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAK 194
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-------- 211
++R G LHS+ +K G+ S F+ N+L+ +YA D +A ++F+ ++
Sbjct: 195 LRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNS 254
Query: 212 ----FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAG 267
++ +G+ E L LFREM G P+ +T+VS L+AC +LG+ +H +LK+
Sbjct: 255 ILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSS 314
Query: 268 LREN-LHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVN 316
+ L+V NAL+ +Y +CG + +A+++ +M +VV+W +LI G N
Sbjct: 315 THSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQN 364
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 157/350 (44%), Gaps = 42/350 (12%)
Query: 42 LPHVLTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHN--PDMGKH----LIFTIVSLSA 95
+P L+ +LL+ CA KL+ I R G LH+ +G H ++ +VS+ A
Sbjct: 178 VPLGLSSFPALLKACA----KLRDI-----RSGSELHSLLVKLGYHSTGFIVNALVSMYA 228
Query: 96 P---MSYAHLVFTMIRNP-NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYP 151
+S A +F + + WN+++ Y+ S L +R+M M+ P+++T
Sbjct: 229 KNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIV 288
Query: 152 FLLKAVSKSLNVREGEALHSVTIKNGF-ESLVFVRNSLLHIYAACGDTESAHKVFESMTD 210
L A + G+ +H+ +K+ S ++V N+L+ +Y CG A ++ M +
Sbjct: 289 SALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNN 348
Query: 211 R-----------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRV 259
+ N EAL F +M A G + D ++ S+++A L L G +
Sbjct: 349 ADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMEL 408
Query: 260 HVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFG 319
H Y++K G NL V N L+D+Y+KC + F M +++++SWTT+I G A N
Sbjct: 409 HAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCH 468
Query: 320 XXXXXXXXXXXXQKLAPGEITFVGVLYACS-----------HCGMLDEGF 358
+++ E+ +L A S HC +L +G
Sbjct: 469 VEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL 518
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 136/317 (42%), Gaps = 38/317 (11%)
Query: 126 QDPKPAL--------HFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKN- 176
Q P P L ++++ +S + ++L+ K V +G LHS K
Sbjct: 51 QVPSPKLACFDGVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTF 110
Query: 177 -GFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFAL-----------NGRPNEALTL 224
FE L F+ L+ +Y CG + A KVF+ M DR A NG P AL L
Sbjct: 111 PSFE-LDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALAL 169
Query: 225 FREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAK 284
+ M GV + +LL ACA+L + G +H L+K G +VNAL+ +YAK
Sbjct: 170 YWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAK 229
Query: 285 CGSIREAQQVFGEMEER-NVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVG 343
+ A+++F +E+ + V W +++ + +G AP T V
Sbjct: 230 NDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVS 289
Query: 344 VLYACSHCGMLDEGFDYFRRMKEEYGIAPR-----IEHYGC--MVDLLSRAGLVKQAYEY 396
L AC +GF Y + KE + + E Y C ++ + +R G + QA
Sbjct: 290 ALTAC-------DGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERI 342
Query: 397 IQNMPVQPNAVIWRTLL 413
++ M + V W +L+
Sbjct: 343 LRQMN-NADVVTWNSLI 358
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 82/195 (42%), Gaps = 4/195 (2%)
Query: 227 EMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH-VVNALLDLYAKC 285
++S N + F V L C + A+ GR++H + K L + L+ +Y KC
Sbjct: 72 DVSENNSPVEAFAYV--LELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKC 129
Query: 286 GSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVL 345
GS+ +A++VF EM +R +W T+I NG + + G +F +L
Sbjct: 130 GSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALL 189
Query: 346 YACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPN 405
AC+ + G + + + G +V + ++ + A + +
Sbjct: 190 KACAKLRDIRSGSE-LHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGD 248
Query: 406 AVIWRTLLGACTIHG 420
AV+W ++L + + G
Sbjct: 249 AVLWNSILSSYSTSG 263
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 275 bits (702), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 141/440 (32%), Positives = 241/440 (54%), Gaps = 33/440 (7%)
Query: 96 PMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLK 155
++ A VF +R + +WN +I + ++ L + M S +EPD T+ +LK
Sbjct: 432 ALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILK 491
Query: 156 AVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKV----------- 204
A + ++ G +HS +K+G S V SL+ +Y+ CG E A K+
Sbjct: 492 ACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS 550
Query: 205 --------------------FESMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLL 244
+ S+ + + + +A LF M G+ PD FT ++L
Sbjct: 551 GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVL 610
Query: 245 SACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVV 304
CA L + LG+++H ++K L+ ++++ + L+D+Y+KCG + +++ +F + R+ V
Sbjct: 611 DTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFV 670
Query: 305 SWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRM 364
+W +I G A +G G + + P +TF+ +L AC+H G++D+G +YF M
Sbjct: 671 TWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMM 730
Query: 365 KEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIH-GHLS 423
K +YG+ P++ HY MVD+L ++G VK+A E I+ MP + + VIWRTLLG CTIH ++
Sbjct: 731 KRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVE 790
Query: 424 LGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELG 483
+ E A + LL+L+P+ S Y LLSN+YA W V +R++M +KK PG S VEL
Sbjct: 791 VAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELK 850
Query: 484 NRVYEFTMGDRSHPQSQDVY 503
+ ++ F +GD++HP+ +++Y
Sbjct: 851 DELHVFLVGDKAHPRWEEIY 870
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 145/303 (47%), Gaps = 15/303 (4%)
Query: 103 VFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLN 162
VF I N +W+ +I G ++ AL F+++M Y +L++ +
Sbjct: 237 VFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 296
Query: 163 VREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE-----------SMTDR 211
+R G LH+ +K+ F + VR + L +YA C + + A +F+ +M
Sbjct: 297 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITG 356
Query: 212 FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLREN 271
++ +AL LF + ++G+ D ++ + ACA + L G +++ +K+ L +
Sbjct: 357 YSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLD 416
Query: 272 LHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXX 331
+ V NA +D+Y KC ++ EA +VF EM R+ VSW +I NG G
Sbjct: 417 VCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR 476
Query: 332 QKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGC-MVDLLSRAGLV 390
++ P E TF +L AC+ G L G + + + G+A GC ++D+ S+ G++
Sbjct: 477 SRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKS-GMASN-SSVGCSLIDMYSKCGMI 533
Query: 391 KQA 393
++A
Sbjct: 534 EEA 536
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 150/341 (43%), Gaps = 25/341 (7%)
Query: 92 SLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYP 151
S S M A+ F M+ +V +WN+M+ GY ++ + ++ + M +E D T+
Sbjct: 125 SKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFA 184
Query: 152 FLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR 211
+LK S + G +H + ++ G ++ V ++LL +YA + +VF+ + ++
Sbjct: 185 IILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEK 244
Query: 212 FAL-----------NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVH 260
++ N + AL F+EM S+L +CA L L LG ++H
Sbjct: 245 NSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLH 304
Query: 261 VYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGX 320
+ LK+ + V A LD+YAKC ++++AQ +F E N S+ +I G + G
Sbjct: 305 AHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGF 364
Query: 321 XXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPR------I 374
L EI+ GV AC+ L EG + YG+A + +
Sbjct: 365 KALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGL-------QIYGLAIKSSLSLDV 417
Query: 375 EHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGA 415
+D+ + + +A+ M + +AV W ++ A
Sbjct: 418 CVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 457
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 128/285 (44%), Gaps = 32/285 (11%)
Query: 97 MSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKA 156
M A ++F N N ++N MI GY++ + AL + ++ S + D + + +A
Sbjct: 332 MQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRA 391
Query: 157 VSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFAL-- 214
+ + EG ++ + IK+ V V N+ + +Y C A +VF+ M R A+
Sbjct: 392 CALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSW 451
Query: 215 ---------NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLK 265
NG+ E L LF M + +EPD FT S+L AC G+L G +H ++K
Sbjct: 452 NAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVK 510
Query: 266 AGLRENLHVVNALLDLYAKCGSIREAQQ----------VFGEMEE----------RNVVS 305
+G+ N V +L+D+Y+KCG I EA++ V G MEE VS
Sbjct: 511 SGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVS 570
Query: 306 WTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSH 350
W ++I G + + P + T+ VL C++
Sbjct: 571 WNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCAN 615
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 93/229 (40%), Gaps = 42/229 (18%)
Query: 130 PALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLL 189
P+ ++ T + F+ K +K + G+ H+ I +GF FV N LL
Sbjct: 31 PSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLL 90
Query: 190 HIYAACGDTESAHKVFE------------------------------------------S 207
+Y D SA VF+ S
Sbjct: 91 QVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNS 150
Query: 208 MTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAG 267
M + NG +++ +F +M G+E DG T +L C+ L LG ++H +++ G
Sbjct: 151 MLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVG 210
Query: 268 LRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVN 316
++ +ALLD+YAK E+ +VF + E+N VSW+ +I G N
Sbjct: 211 CDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQN 259
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 275 bits (702), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 148/456 (32%), Positives = 252/456 (55%), Gaps = 17/456 (3%)
Query: 63 LKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIR-NPNVFTWNTMIRG 121
LKQ+HA ++ G+ H + +I + + +S A VF + + ++ +WN+MI G
Sbjct: 222 LKQVHAKVLKLGLQ-HEITICNAMISSYADCGS-VSDAKRVFDGLGGSKDLISWNSMIAG 279
Query: 122 YAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESL 181
+++ + + A + QM VE D +TY LL A S + G++LH + IK G E +
Sbjct: 280 FSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQV 339
Query: 182 VFVRNSLLHIYAA--CGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREM 228
N+L+ +Y G E A +FES+ + FA G +A+ F +
Sbjct: 340 TSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYL 399
Query: 229 SANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSI 288
++ ++ D + +LL +C++L L+LG+++H K+G N V+++L+ +Y+KCG I
Sbjct: 400 RSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGII 459
Query: 289 REAQQVFGEMEER-NVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYA 347
A++ F ++ + + V+W +I+G A +G G Q + +TF +L A
Sbjct: 460 ESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTA 519
Query: 348 CSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAV 407
CSH G++ EG + M+ Y I PR+EHY VDLL RAGLV +A E I++MP+ P+ +
Sbjct: 520 CSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPM 579
Query: 408 IWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSML 467
+ +T LG C G + + +HLL++EP+ YV LS++Y+ ++W + +++K M
Sbjct: 580 VLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMK 639
Query: 468 QDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVY 503
+ GVKK PG+S +E+ N+V F DRS+P QD+Y
Sbjct: 640 ERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIY 675
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 142/307 (46%), Gaps = 25/307 (8%)
Query: 61 HKLKQIHAFSIRHG----VPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWN 116
KL H ++I+ G + + N + ++ F + YA+++F + + +WN
Sbjct: 17 QKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGF------LGYANMLFDEMPKRDSVSWN 70
Query: 117 TMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKN 176
TMI GY + A + M S + D +++ LLK ++ GE +H + IK
Sbjct: 71 TMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKG 130
Query: 177 GFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEA-------------LT 223
G+E V+V +SL+ +YA C E A + F+ +++ +++ A L
Sbjct: 131 GYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLL 190
Query: 224 LFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYA 283
EM A V D T LL+ + L ++VH +LK GL+ + + NA++ YA
Sbjct: 191 GLMEMKA-AVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYA 249
Query: 284 KCGSIREAQQVF-GEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFV 342
CGS+ +A++VF G ++++SW ++I G + + + T+
Sbjct: 250 DCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYT 309
Query: 343 GVLYACS 349
G+L ACS
Sbjct: 310 GLLSACS 316
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 151/438 (34%), Positives = 243/438 (55%), Gaps = 29/438 (6%)
Query: 82 MGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMS 141
+ + +F ++ L ++ A+ VF + NV W +MI GY ++D A ++
Sbjct: 29 LNQMFLFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSP-- 86
Query: 142 CVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESL----VFVRNSLLHIYAACGD 197
E D + ++ + N+ E +L F+ + V N++L YA GD
Sbjct: 87 --ERDIVLWNTMISGYIEMGNMLEARSL--------FDQMPCRDVMSWNTVLEGYANIGD 136
Query: 198 TESAHKVFESMTDR-----------FALNGRPNEALTLFREMSANG-VEPDGFTVVSLLS 245
E+ +VF+ M +R +A NGR +E L F+ M G V P+ T+ +LS
Sbjct: 137 MEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLS 196
Query: 246 ACAELGALELGRRVHVYLLKAGLRE-NLHVVNALLDLYAKCGSIREAQQVFGEMEERNVV 304
ACA+LGA + G+ VH Y G + +++V NAL+D+Y KCG+I A +VF ++ R+++
Sbjct: 197 ACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLI 256
Query: 305 SWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRM 364
SW T+I GLA +G G ++P ++TFVGVL AC H G++++G YF M
Sbjct: 257 SWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSM 316
Query: 365 KEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSL 424
++ I P IEH GC+VDLLSRAG + QA E+I MPV+ +AVIW TLLGA ++ + +
Sbjct: 317 FTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDI 376
Query: 425 GEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGN 484
GE+A L+KLEP++ ++V+LSN+Y R+ D ++ +M G KK G S +E +
Sbjct: 377 GEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDD 436
Query: 485 RVYEFTMGDRSHPQSQDV 502
+ +F HP+++++
Sbjct: 437 GLVKFYSSGEKHPRTEEL 454
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 141/420 (33%), Positives = 228/420 (54%), Gaps = 15/420 (3%)
Query: 85 HLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVE 144
H + + + + YA +F I + +WN+MI GY+E+ K A+ +R+M E
Sbjct: 171 HSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFE 230
Query: 145 PDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKV 204
PD T +L A S ++R G L + I F+ + L+ +Y CGD +SA +V
Sbjct: 231 PDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRV 290
Query: 205 FESMTDR-----------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGAL 253
F M + ++ NG+ +EA LF EM GV PD T+ ++LSAC +GAL
Sbjct: 291 FNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGAL 350
Query: 254 ELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGL 313
ELG+++ + + L+ N++V L+D+Y KCG + EA +VF M +N +W +I
Sbjct: 351 ELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAY 410
Query: 314 AVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPR 373
A G + P +ITF+GVL AC H G++ +G YF M +G+ P+
Sbjct: 411 AHQGHAKEALLLFDR---MSVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPK 467
Query: 374 IEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLL 433
IEHY ++DLLSRAG++ +A+E+++ P +P+ ++ +LGAC +++ E A L+
Sbjct: 468 IEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLM 527
Query: 434 KL-EPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMG 492
++ E K++G+YV+ SN+ A + W + +R M GV KTPG S +E+ + EF G
Sbjct: 528 EMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAG 587
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 189/395 (47%), Gaps = 28/395 (7%)
Query: 39 ENPLPHVLTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMS 98
E +L KCIS+ ++L+QI A + H V N LI V L +
Sbjct: 37 ERDFLFLLKKCISV--------NQLRQIQAQMLLHSVEKPN-----FLIPKAVEL-GDFN 82
Query: 99 YAHLVFTMIRNPNVFTWNTMIRGYAES-QDPKPALHFYRQMTMSCVEPDTHTYPFLLKAV 157
Y+ +F++ PN +++N MIRG + D + AL YR+M S ++PD TY F+ A
Sbjct: 83 YSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIAC 142
Query: 158 SKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR------ 211
+K + G ++HS K G E V + +SL+ +YA CG A K+F+ +T+R
Sbjct: 143 AKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWN 202
Query: 212 -----FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKA 266
++ G +A+ LFR+M G EPD T+VS+L AC+ LG L GR + +
Sbjct: 203 SMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITK 262
Query: 267 GLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXX 326
+ + + + L+ +Y KCG + A++VF +M +++ V+WT +I + NG
Sbjct: 263 KIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLF 322
Query: 327 XXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSR 386
++P T VL AC G L+ G E + I +VD+ +
Sbjct: 323 FEMEKTGVSPDAGTLSTVLSACGSVGALELG-KQIETHASELSLQHNIYVATGLVDMYGK 381
Query: 387 AGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGH 421
G V++A + MPV+ N W ++ A GH
Sbjct: 382 CGRVEEALRVFEAMPVK-NEATWNAMITAYAHQGH 415
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 121/258 (46%), Gaps = 43/258 (16%)
Query: 221 ALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLD 280
AL+L+R M +G++PD FT + ACA+L + +GR VH L K GL ++H+ ++L+
Sbjct: 116 ALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIM 175
Query: 281 LYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEIT 340
+YAKCG + A+++F E+ ER+ VSW ++I G + G+ + P E T
Sbjct: 176 MYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERT 235
Query: 341 FVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPR-----------IEHYG----------- 378
V +L ACSH G L G R+ EE I + I YG
Sbjct: 236 LVSMLGACSHLGDLRTG-----RLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRV 290
Query: 379 -------------CMVDLLSRAGLVKQAYEYIQNMP---VQPNAVIWRTLLGACTIHGHL 422
M+ + S+ G +A++ M V P+A T+L AC G L
Sbjct: 291 FNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGAL 350
Query: 423 SLGEIARSHLLKLEPKHS 440
LG+ +H +L +H+
Sbjct: 351 ELGKQIETHASELSLQHN 368
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 156/472 (33%), Positives = 247/472 (52%), Gaps = 21/472 (4%)
Query: 49 CISLLQYCASSKHKL---KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFT 105
C S+L CAS H L Q+HA++I+ L N + + + + ++ A VF
Sbjct: 353 CSSILTSCAS-LHALGFGTQVHAYTIK--ANLGNDSYVTNSLIDMYAKCDCLTDARKVFD 409
Query: 106 MIRNPNVFTWNTMIRGYAE---SQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLN 162
+ +V +N MI GY+ + AL+ +R M + P T+ LL+A + +
Sbjct: 410 IFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTS 469
Query: 163 VREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR----------- 211
+ + +H + K G +F ++L+ +Y+ C + + VF+ M +
Sbjct: 470 LGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAG 529
Query: 212 FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLREN 271
+ EAL LF E+ + PD FT ++++A L +++LG+ H LLK GL N
Sbjct: 530 YVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECN 589
Query: 272 LHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXX 331
++ NALLD+YAKCGS +A + F R+VV W ++I A +G G
Sbjct: 590 PYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMS 649
Query: 332 QKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVK 391
+ + P ITFVGVL ACSH G++++G F M +GI P EHY CMV LL RAG +
Sbjct: 650 EGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLN 708
Query: 392 QAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYA 451
+A E I+ MP +P A++WR+LL C G++ L E A + +PK SG + +LSN+YA
Sbjct: 709 KARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYA 768
Query: 452 SERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVY 503
S+ WT+ + +R+ M +GV K PG S + + V+ F D+SH ++ +Y
Sbjct: 769 SKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIY 820
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 179/395 (45%), Gaps = 25/395 (6%)
Query: 39 ENPLPHVLTKCISLLQYCAS----SKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLS 94
++P ++L+ S +Q C+ + + Q+ +F ++ G + +G LI +
Sbjct: 142 DSPNEYILS---SFIQACSGLDGRGRWMVFQLQSFLVKSGFD-RDVYVGTLLIDFYLK-D 196
Query: 95 APMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLL 154
+ YA LVF + + TW TMI G + +L + Q+ V PD + +L
Sbjct: 197 GNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVL 256
Query: 155 KAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR--- 211
A S + G+ +H+ ++ G E + N L+ Y CG +AHK+F M ++
Sbjct: 257 SACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNII 316
Query: 212 --------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYL 263
+ N EA+ LF MS G++PD + S+L++CA L AL G +VH Y
Sbjct: 317 SWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYT 376
Query: 264 LKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXX 323
+KA L + +V N+L+D+YAKC + +A++VF +VV + +I G + G
Sbjct: 377 IKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELH 436
Query: 324 XXXXXXXXQK---LAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCM 380
+ + P +TFV +L A + L + +YG+ I +
Sbjct: 437 EALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLS-KQIHGLMFKYGLNLDIFAGSAL 495
Query: 381 VDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGA 415
+D+ S +K + M V+ + VIW ++
Sbjct: 496 IDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFAG 529
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 148/320 (46%), Gaps = 37/320 (11%)
Query: 52 LLQYCASSK--HKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRN 109
LLQ AS H +H I G+ L +++ + S + M YA VF +
Sbjct: 50 LLQLRASDDLLHYQNVVHGQIIVWGLELDT--YLSNILINLYSRAGGMVYARKVFEKMPE 107
Query: 110 PNVFTWNTMIRG------YAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNV 163
N+ +W+TM+ Y ES L F+R S P+ + ++A S L+
Sbjct: 108 RNLVSWSTMVSACNHHGIYEES--LVVFLEFWRTRKDS---PNEYILSSFIQACS-GLDG 161
Query: 164 REGE---ALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALN----- 215
R L S +K+GF+ V+V L+ Y G+ + A VF+++ ++ +
Sbjct: 162 RGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMI 221
Query: 216 ------GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLR 269
GR +L LF ++ + V PDG+ + ++LSAC+ L LE G+++H ++L+ GL
Sbjct: 222 SGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLE 281
Query: 270 ENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXX 329
+ ++N L+D Y KCG + A ++F M +N++SWTTL+ G N
Sbjct: 282 MDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM 341
Query: 330 XXQKLAPGEITFVGVLYACS 349
L P +YACS
Sbjct: 342 SKFGLKPD-------MYACS 354
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 111/263 (42%), Gaps = 20/263 (7%)
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALN-----------GR 217
+H I G E ++ N L+++Y+ G A KVFE M +R ++ G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 218 PNEALTLFREM-SANGVEPDGFTVVSLLSACAELGALELGR----RVHVYLLKAGLRENL 272
E+L +F E P+ + + S + AC+ L GR ++ +L+K+G ++
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGR--GRWMVFQLQSFLVKSGFDRDV 183
Query: 273 HVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQ 332
+V L+D Y K G+I A+ VF + E++ V+WTT+I G G
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMED 243
Query: 333 KLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQ 392
+ P VL ACS L EG YG+ ++D + G V
Sbjct: 244 NVVPDGYILSTVLSACSILPFL-EGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIA 302
Query: 393 AYEYIQNMPVQPNAVIWRTLLGA 415
A++ MP N + W TLL
Sbjct: 303 AHKLFNGMP-NKNIISWTTLLSG 324
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 271 bits (694), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 151/458 (32%), Positives = 248/458 (54%), Gaps = 20/458 (4%)
Query: 63 LKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMI--RNPNVFTWNTMIR 120
+K++H + + G + +G L+ T S + A VF + R+ +V WN ++
Sbjct: 179 VKKVHGLAFKLGFD-SDCYVGSGLV-TSYSKFMSVEDAQKVFDELPDRDDSVL-WNALVN 235
Query: 121 GYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFES 180
GY++ + AL + +M V HT +L A + S ++ G ++H + +K G S
Sbjct: 236 GYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGS 295
Query: 181 LVFVRNSLLHIYAACGDTESAHKVFESMTDR--FALN---------GRPNEALTLFREMS 229
+ V N+L+ +Y E A+ +FE+M +R F N G + L LF M
Sbjct: 296 DIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERML 355
Query: 230 ANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGL----RENLHVVNALLDLYAKC 285
+G+ PD T+ ++L C L +L GR +H Y++ +GL N + N+L+D+Y KC
Sbjct: 356 CSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKC 415
Query: 286 GSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVL 345
G +R+A+ VF M ++ SW +I G V G + P EITFVG+L
Sbjct: 416 GDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLL 475
Query: 346 YACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPN 405
ACSH G L+EG ++ +M+ Y I P +HY C++D+L RA +++AYE + P+ N
Sbjct: 476 QACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDN 535
Query: 406 AVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKS 465
V+WR++L +C +HG+ L +A L +LEP+H G YVL+SN+Y ++ +V +R +
Sbjct: 536 PVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDA 595
Query: 466 MLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVY 503
M Q VKKTPG S + L N V+ F G+++HP+ + ++
Sbjct: 596 MRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIH 633
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 191/411 (46%), Gaps = 29/411 (7%)
Query: 39 ENPLP---HVLTKCISLLQYCASSKHKL--KQIHAFSIRHGVPLHNPDMGKHLIFTIVSL 93
ENP H + CI+ LQ CA K + +QIH F +R G +P G L+ + +
Sbjct: 50 ENPKRYEHHNVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLV-NMYAK 108
Query: 94 SAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFL 153
M A LVF +VF +N +I G+ + P A+ YR+M + + PD +T+P L
Sbjct: 109 CGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSL 167
Query: 154 LKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-- 211
LK S ++ + + + +H + K GF+S +V + L+ Y+ E A KVF+ + DR
Sbjct: 168 LKG-SDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDD 226
Query: 212 -----FALNG-----RPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHV 261
+NG R +AL +F +M GV T+ S+LSA G ++ GR +H
Sbjct: 227 SVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHG 286
Query: 262 YLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXX 321
+K G ++ V NAL+D+Y K + EA +F M+ER++ +W +++ G
Sbjct: 287 LAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDG 346
Query: 322 XXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEH----Y 377
+ P +T VL C L +G + M G+ R +
Sbjct: 347 TLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVS-GLLNRKSSNEFIH 405
Query: 378 GCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIA 428
++D+ + G ++ A +M V+ +A W ++ +G S GE+A
Sbjct: 406 NSLMDMYVKCGDLRDARMVFDSMRVKDSAS-WNIMING---YGVQSCGELA 452
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 160/451 (35%), Positives = 243/451 (53%), Gaps = 21/451 (4%)
Query: 64 KQIHAFSIRHGVP--LHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRG 121
KQ+H S++ G+ LH G LI + S + A VF+ + +V + N +I G
Sbjct: 549 KQVHCLSVKCGLDRDLHT---GSSLI-DMYSKCGIIKDARKVFSSLPEWSVVSMNALIAG 604
Query: 122 YAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESL 181
Y+++ + + A+ +++M V P T+ +++A K ++ G H K GF S
Sbjct: 605 YSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSE 663
Query: 182 -VFVRNSLLHIYAACGDTESAHKVFESMTDRFAL------------NGRPNEALTLFREM 228
++ SLL +Y A +F ++ ++ NG EAL ++EM
Sbjct: 664 GEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEM 723
Query: 229 SANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSI 288
+GV PD T V++L C+ L +L GR +H + + N L+D+YAKCG +
Sbjct: 724 RHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDM 783
Query: 289 REAQQVFGEMEER-NVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYA 347
+ + QVF EM R NVVSW +LI G A NG+ + P EITF+GVL A
Sbjct: 784 KGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTA 843
Query: 348 CSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAV 407
CSH G + +G F M +YGI R++H CMVDLL R G +++A ++I+ ++P+A
Sbjct: 844 CSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDAR 903
Query: 408 IWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSML 467
+W +LLGAC IHG GEI+ L++LEP++S YVLLSN+YAS+ W +RK M
Sbjct: 904 LWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMR 963
Query: 468 QDGVKKTPGYSLVELGNRVYEFTMGDRSHPQ 498
GVKK PGYS +++ R + F GD+SH +
Sbjct: 964 DRGVKKVPGYSWIDVEQRTHIFAAGDKSHSE 994
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 146/294 (49%), Gaps = 14/294 (4%)
Query: 66 IHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAES 125
+HA +I+ G+ N +G L+ ++ S M A VF + N WN MIRGYA +
Sbjct: 349 VHAEAIKLGLA-SNIYVGSSLV-SMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHN 406
Query: 126 QDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVR 185
+ + + M S D T+ LL + S ++ G HS+ IK +FV
Sbjct: 407 GESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVG 466
Query: 186 NSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMSANGVE 234
N+L+ +YA CG E A ++FE M DR + + +EA LF+ M+ G+
Sbjct: 467 NALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIV 526
Query: 235 PDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQV 294
DG + S L AC + L G++VH +K GL +LH ++L+D+Y+KCG I++A++V
Sbjct: 527 SDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKV 586
Query: 295 FGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYAC 348
F + E +VVS LI G + N + + P EITF ++ AC
Sbjct: 587 FSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEAC 639
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 171/350 (48%), Gaps = 23/350 (6%)
Query: 78 HNPDMGKHLIFTIVSLS----APMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALH 133
H PD HL F V + + A L+F + +P+V WN MI G+ + A+
Sbjct: 257 HRPD---HLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIE 313
Query: 134 FYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYA 193
++ M S V+ T +L A+ N+ G +H+ IK G S ++V +SL+ +Y+
Sbjct: 314 YFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYS 373
Query: 194 ACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMSANGVEPDGFTVVS 242
C E+A KVFE++ ++ +A NG ++ + LF +M ++G D FT S
Sbjct: 374 KCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTS 433
Query: 243 LLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERN 302
LLS CA LE+G + H ++K L +NL V NAL+D+YAKCG++ +A+Q+F M +R+
Sbjct: 434 LLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRD 493
Query: 303 VVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFR 362
V+W T+I + + L AC+H L +G
Sbjct: 494 NVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG-KQVH 552
Query: 363 RMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMP----VQPNAVI 408
+ + G+ + ++D+ S+ G++K A + ++P V NA+I
Sbjct: 553 CLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALI 602
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 135/304 (44%), Gaps = 26/304 (8%)
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE----------SMT 209
+L +R G+A+HS ++ G +S + N+++ +YA C A K F+ SM
Sbjct: 73 ALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEKDVTAWNSML 132
Query: 210 DRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLR 269
++ G+P + L F + N + P+ FT +LS CA +E GR++H ++K GL
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 270 ENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXX 329
N + AL+D+YAKC I +A++VF + + N V WT L G G
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 330 XXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGL 389
+ P + FV V+ G L + F M +P + + M+ + G
Sbjct: 253 RDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISGHGKRGC 307
Query: 390 VKQAYEYIQNM---PVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLL 446
A EY NM V+ ++L A I +L LG + + +KL L
Sbjct: 308 ETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG--------LA 359
Query: 447 SNLY 450
SN+Y
Sbjct: 360 SNIY 363
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 150/400 (37%), Gaps = 63/400 (15%)
Query: 62 KLKQIHAFSIRHGVPLHNP------DMGKHLIFTIVSL---SAPMSYAHLVFTMIRNPNV 112
++ Q A ++R G +H+ D L IV L A +SYA F + +V
Sbjct: 67 EMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDV 125
Query: 113 FTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSV 172
WN+M+ Y+ P L + + + + P+ T+ +L ++ NV G +H
Sbjct: 126 TAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCS 185
Query: 173 TIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTD-----------RFALNGRPNEA 221
IK G E + +L+ +YA C A +VFE + D + G P EA
Sbjct: 186 MIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEA 245
Query: 222 LTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDL 281
+ +F M G PD V++++
Sbjct: 246 VLVFERMRDEGHRPDHLAFVTVINT----------------------------------- 270
Query: 282 YAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITF 341
Y + G +++A+ +FGEM +VV+W +I G G + T
Sbjct: 271 YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTL 330
Query: 342 VGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMP 401
VL A LD G + G+A I +V + S+ ++ A + + +
Sbjct: 331 GSVLSAIGIVANLDLGL-VVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE 389
Query: 402 VQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSG 441
+ N V W + I G+ GE + L ++ K SG
Sbjct: 390 -EKNDVFWNAM-----IRGYAHNGESHKVMELFMDMKSSG 423
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 269 bits (688), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 135/303 (44%), Positives = 197/303 (65%), Gaps = 17/303 (5%)
Query: 195 CGDTESAHKVFESMTDRFALN-----------GRPNEALTLFREMSANGVEPDGFTVVSL 243
C + +SA ++F+ T++ + G P EAL +F+EM G PD T++SL
Sbjct: 222 CKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSL 281
Query: 244 LSACAELGALELGRRVHVYLLK-AGLRENLHV----VNALLDLYAKCGSIREAQQVFGEM 298
LSACA LG LE G+R+H+Y+L+ A + +++V NAL+D+YAKCGSI A +VF +
Sbjct: 282 LSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGV 341
Query: 299 EERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGF 358
++R++ +W TLIVGLA++ K+ P E+TF+GV+ ACSH G +DEG
Sbjct: 342 KDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGR 400
Query: 359 DYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTI 418
YF M++ Y I P I+HYGCMVD+L RAG +++A+ ++++M ++PNA++WRTLLGAC I
Sbjct: 401 KYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKI 460
Query: 419 HGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYS 478
+G++ LG+ A LL + SGDYVLLSN+YAS +W VQ +RK VKK G S
Sbjct: 461 YGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVS 520
Query: 479 LVE 481
L+E
Sbjct: 521 LIE 523
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 269 bits (688), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 153/449 (34%), Positives = 234/449 (52%), Gaps = 24/449 (5%)
Query: 51 SLLQYCA--SSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSL---SAPMSYAHLVFT 105
+L+ C S+ H+ K H ++ G+ L + L+ +++ + +S A VF
Sbjct: 247 TLIMACTKLSALHQGKWFHGCLVKSGIELSSC-----LVTSLLDMYVKCGDISNARRVFN 301
Query: 106 MIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVRE 165
+ ++ W MI GY + AL +++M ++P+ T +L N+
Sbjct: 302 EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLEL 361
Query: 166 GEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE-----------SMTDRFAL 214
G ++H ++IK G V N+L+H+YA C A VFE S+ F+
Sbjct: 362 GRSVHGLSIKVGIWD-TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQ 420
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGL--RENL 272
NG +EAL LF M++ V P+G TV SL SACA LG+L +G +H Y +K G ++
Sbjct: 421 NGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSV 480
Query: 273 HVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQ 332
HV ALLD YAKCG + A+ +F +EE+N ++W+ +I G G +
Sbjct: 481 HVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKK 540
Query: 333 KLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQ 392
+ P E TF +L AC H GM++EG YF M ++Y P +HY CMVD+L+RAG ++Q
Sbjct: 541 QQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQ 600
Query: 393 AYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYAS 452
A + I+ MP+QP+ + L C +H LGEI +L L P + YVL+SNLYAS
Sbjct: 601 ALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYAS 660
Query: 453 ERRWTDVQTIRKSMLQDGVKKTPGYSLVE 481
+ RW + +R M Q G+ K G+S +E
Sbjct: 661 DGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 185/442 (41%), Gaps = 63/442 (14%)
Query: 51 SLLQYCASSK-----HKLKQIHAFSIRHGVPLHNPDMGKHLIFT-IVSLSAPMSY---AH 101
S L Y ASS K I + HGV N MG I T +VSL Y A
Sbjct: 37 SSLHYAASSPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDAR 96
Query: 102 LVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSL 161
LVF I P+ + W M+R Y +++ + Y + D + LKA ++
Sbjct: 97 LVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQ 156
Query: 162 NVREGEALHSVTIK-NGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR--------- 211
++ G+ +H +K F+++V LL +YA CG+ +SAHKVF +T R
Sbjct: 157 DLDNGKKIHCQLVKVPSFDNVVLT--GLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMI 214
Query: 212 --FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLR 269
+ N E L LF M N V + +T +L+ AC +L AL G+ H L+K+G+
Sbjct: 215 AGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIE 274
Query: 270 ENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXX 329
+ +V +LLD+Y KCG I A++VF E ++V WT +IVG NG
Sbjct: 275 LSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKM 334
Query: 330 XXQKLAPGEITFVGVLYACS----------------HCGMLDEGF--------------- 358
++ P +T VL C G+ D
Sbjct: 335 KGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNR 394
Query: 359 --DYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQA---YEYIQNMPVQPNAVIWRTLL 413
Y M+ E I + ++ S+ G + +A + + + V PN V +L
Sbjct: 395 DAKYVFEMESEKDIVA----WNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLF 450
Query: 414 GACTIHGHLSLGEIARSHLLKL 435
AC G L++G ++ +KL
Sbjct: 451 SACASLGSLAVGSSLHAYSVKL 472
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 269 bits (687), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 152/432 (35%), Positives = 227/432 (52%), Gaps = 46/432 (10%)
Query: 114 TWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVRE--GEALHS 171
+W + I + A + MT++ VEP+ T+ LL + E G+ LH
Sbjct: 38 SWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHG 97
Query: 172 VTIKNGFES-----------------------LVF---------VRNSLLHIYAACGDTE 199
K G + LVF N+++ Y G +
Sbjct: 98 YACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVD 157
Query: 200 SAHKVFESMTDR-----------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACA 248
+A K+F+ M +R F G EAL FREM +GV+PD +++ L+AC
Sbjct: 158 NAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACT 217
Query: 249 ELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTT 308
LGAL G VH Y+L + N+ V N+L+DLY +CG + A+QVF ME+R VVSW +
Sbjct: 218 NLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNS 277
Query: 309 LIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEY 368
+IVG A NG + P +TF G L ACSH G+++EG YF+ MK +Y
Sbjct: 278 VIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDY 337
Query: 369 GIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHG-HLSLGEI 427
I+PRIEHYGC+VDL SRAG ++ A + +Q+MP++PN V+ +LL AC+ HG ++ L E
Sbjct: 338 RISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAER 397
Query: 428 ARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVY 487
HL L K +YV+LSN+YA++ +W +R+ M G+KK PG+S +E+ + ++
Sbjct: 398 LMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMH 457
Query: 488 EFTMGDRSHPQS 499
F GD +H ++
Sbjct: 458 VFMAGDNAHVET 469
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 132/297 (44%), Gaps = 50/297 (16%)
Query: 50 ISLLQYC----ASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFT 105
I+LL C + S+ +H ++ + G+ ++ +G +I + S A LVF
Sbjct: 75 IALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAII-GMYSKRGRFKKARLVFD 133
Query: 106 MIRNPNVFTWNTMIRGYAESQ---------DPKP----------------------ALHF 134
+ + N TWNTMI GY S D P AL +
Sbjct: 134 YMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLW 193
Query: 135 YRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAA 194
+R+M +S V+PD L A + + G +H + F++ V V NSL+ +Y
Sbjct: 194 FREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCR 253
Query: 195 CGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMSANGVEPDGFTVVSL 243
CG E A +VF +M R FA NG +E+L FR+M G +PD T
Sbjct: 254 CGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGA 313
Query: 244 LSACAELGALELGRRVHVYLLKAGLRENLHV--VNALLDLYAKCGSIREAQQVFGEM 298
L+AC+ +G +E G R + ++K R + + L+DLY++ G + +A ++ M
Sbjct: 314 LTACSHVGLVEEGLR-YFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSM 369
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 116/262 (44%), Gaps = 41/262 (15%)
Query: 198 TESAHKVFESMTDRFAL---NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAEL--GA 252
+S + S T R L NGR EA F +M+ GVEP+ T ++LLS C + G+
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 253 LELGRRVHVYLLKAGL-RENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIV 311
LG +H Y K GL R ++ V A++ +Y+K G ++A+ VF ME++N V+W T+I
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 312 GL--------------------------AVNGF---GXXXXXXXXXXXXQ--KLAPGEIT 340
G +NGF G Q + P +
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 341 FVGVLYACSHCGMLDEGFDYFRR-MKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQN 399
+ L AC++ G L G R + +++ R+ + ++DL R G V+ A + N
Sbjct: 209 IIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSN--SLIDLYCRCGCVEFARQVFYN 266
Query: 400 MPVQPNAVIWRTLLGACTIHGH 421
M + V W +++ +G+
Sbjct: 267 ME-KRTVVSWNSVIVGFAANGN 287
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 143/419 (34%), Positives = 227/419 (54%), Gaps = 21/419 (5%)
Query: 103 VFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLN 162
VF +R +V +WNTMI + ++ L +M + D T LL A S N
Sbjct: 375 VFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRN 434
Query: 163 VREGEALHSVTIKNG--FESLVFVRNSLLHIYAACGDTESAHKVFE-------------S 207
G+ H+ I+ G FE + + L+ +Y+ G + K+FE S
Sbjct: 435 KEIGKQTHAFLIRQGIQFEGM---NSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNS 491
Query: 208 MTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAG 267
M + NG + +FR+M + P+ TV S+L AC+++G+++LG+++H + ++
Sbjct: 492 MISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQY 551
Query: 268 LRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXX 327
L +N+ V +AL+D+Y+K G+I+ A+ +F + +ERN V++TT+I+G +G G
Sbjct: 552 LDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFL 611
Query: 328 XXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRA 387
+ P ITFV VL ACS+ G++DEG F M+E Y I P EHY C+ D+L R
Sbjct: 612 SMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRV 671
Query: 388 GLVKQAYEYIQNMPVQPN-AVIWRTLLGACTIHGHLSLGEIARSHLLKLE--PKHSGDYV 444
G V +AYE+++ + + N A +W +LLG+C +HG L L E L K + SG V
Sbjct: 672 GRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEV 731
Query: 445 LLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVY 503
LLSN+YA E++W V +R+ M + G+KK G S +E+ V F D+ HP S ++Y
Sbjct: 732 LLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIY 790
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 184/399 (46%), Gaps = 37/399 (9%)
Query: 51 SLLQYCASSKH--KLKQIHAFSIR----HGVPLHNPDMGKHLIFTIVSLSAPMSYAH--- 101
S L+ CA +K+ K +H IR +HN M + + L+AP + +
Sbjct: 112 STLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMY----VSCLNAPDCFEYDVV 167
Query: 102 -LVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKS 160
VF +R NV WNT+I Y ++ A + M V+P ++ + AVS S
Sbjct: 168 RKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSIS 227
Query: 161 LNVREGEALHSVTIKNGFESL--VFVRNSLLHIYAACGDTESAHKVFESMTDR------- 211
++++ + + +K G E + +FV +S + +YA GD ES+ +VF+S +R
Sbjct: 228 RSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNT 287
Query: 212 ----FALNGRPNEALTLFRE-MSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKA 266
+ N E++ LF E + + + D T + SA + L +ELGR+ H ++ K
Sbjct: 288 MIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKN 347
Query: 267 GLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXX 326
+ +VN+L+ +Y++CGS+ ++ VF M ER+VVSW T+I NG
Sbjct: 348 FRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLV 407
Query: 327 XXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGC---MVDL 383
Q IT +L A S+ + G + + I I+ G ++D+
Sbjct: 408 YEMQKQGFKIDYITVTALLSAASNLRNKEIG-----KQTHAFLIRQGIQFEGMNSYLIDM 462
Query: 384 LSRAGLVKQAYEYIQNMP-VQPNAVIWRTLLGACTIHGH 421
S++GL++ + + + + + W +++ T +GH
Sbjct: 463 YSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGH 501
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 156/343 (45%), Gaps = 24/343 (6%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQM--TMSCVEPDTHTYPFLLKAV 157
A +F I P WNT+I G+ + P AL FY +M T D +TY LKA
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 158 SKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDT------ESAHKVFESMTDR 211
+++ N++ G+A+H I+ S V NSL+++Y +C + + KVF++M +
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRK 177
Query: 212 -----------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVH 260
+ GR EA F M V+P + V++ A + +++ +
Sbjct: 178 NVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFY 237
Query: 261 VYLLKAGLR--ENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLI-VGLAVNG 317
+LK G ++L VV++ + +YA+ G I +++VF ERN+ W T+I V + +
Sbjct: 238 GLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDC 297
Query: 318 FGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHY 377
+++ E+T++ A S ++ G + + + + P +
Sbjct: 298 LVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVN 357
Query: 378 GCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHG 420
MV + SR G V +++ +M + + V W T++ A +G
Sbjct: 358 SLMV-MYSRCGSVHKSFGVFLSMR-ERDVVSWNTMISAFVQNG 398
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 27/268 (10%)
Query: 39 ENPLPHVLTKCISLLQYCAS--SKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAP 96
+N P+ +T S+L C+ S KQ+H FSIR + N + L+ + S +
Sbjct: 515 QNIRPNAVT-VASILPACSQIGSVDLGKQLHGFSIRQYLD-QNVFVASALV-DMYSKAGA 571
Query: 97 MSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKA 156
+ YA +F+ + N T+ TMI GY + + A+ + M S ++PD T+ +L A
Sbjct: 572 IKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSA 631
Query: 157 VSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNG 216
S S + EG + FE + V N + + + + +TD G
Sbjct: 632 CSYSGLIDEGLKI--------FEEMREVYN-----------IQPSSEHYCCITDMLGRVG 672
Query: 217 RPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVN 276
R NEA + + G + + SLL +C G LEL V L K +N
Sbjct: 673 RVNEAYEFVKGLGEEGNIAELWG--SLLGSCKLHGELELAETVSERLAKFDKGKNFSGYE 730
Query: 277 ALL-DLYAKCGSIREAQQVFGEMEERNV 303
LL ++YA+ + +V M E+ +
Sbjct: 731 VLLSNMYAEEQKWKSVDKVRRGMREKGL 758
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 266 bits (680), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 146/450 (32%), Positives = 232/450 (51%), Gaps = 43/450 (9%)
Query: 94 SAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFL 153
S + A +VF + +V +WNTM+ GYA+ + AL FY++ S ++ + ++ L
Sbjct: 126 SGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGL 185
Query: 154 LKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-- 211
L A KS ++ H + GF S V + S++ YA CG ESA + F+ MT +
Sbjct: 186 LTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDI 245
Query: 212 ----------------------------------------FALNGRPNEALTLFREMSAN 231
+ G N AL LFR+M A
Sbjct: 246 HIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIAL 305
Query: 232 GVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREA 291
GV+P+ FT S L A A + +L G+ +H Y+++ +R N V+++L+D+Y+K GS+ +
Sbjct: 306 GVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEAS 365
Query: 292 QQVFGEMEER-NVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSH 350
++VF +++ + V W T+I LA +G G ++ P T V +L ACSH
Sbjct: 366 ERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSH 425
Query: 351 CGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWR 410
G+++EG +F M ++GI P EHY C++DLL RAG K+ I+ MP +P+ IW
Sbjct: 426 SGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWN 485
Query: 411 TLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDG 470
+LG C IHG+ LG+ A L+KL+P+ S Y+LLS++YA +W V+ +R M +
Sbjct: 486 AILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRR 545
Query: 471 VKKTPGYSLVELGNRVYEFTMGDRSHPQSQ 500
V K S +E+ +V FT+ D SH ++
Sbjct: 546 VNKEKAVSWIEIEKKVEAFTVSDGSHAHAR 575
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 139/333 (41%), Gaps = 50/333 (15%)
Query: 186 NSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMSANGVE 234
N+++ Y G A VF+SM +R +A +G +EAL ++E +G++
Sbjct: 117 NNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIK 176
Query: 235 PDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIRE---- 290
+ F+ LL+AC + L+L R+ H +L AG N+ + +++D YAKCG +
Sbjct: 177 FNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRC 236
Query: 291 ---------------------------AQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXX 323
A+++F EM E+N VSWT LI G G G
Sbjct: 237 FDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRAL 296
Query: 324 XXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDL 383
+ P + TF L A + L G + M + P ++D+
Sbjct: 297 DLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT-NVRPNAIVISSLIDM 355
Query: 384 LSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIH--GHLSLGEIARSHLLKLEPKHSG 441
S++G ++ + + + + V W T++ A H GH +L + +++P +
Sbjct: 356 YSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTT 415
Query: 442 DYVLL-----SNLYASERRWTDVQTIRKSMLQD 469
V+L S L RW + T++ ++ D
Sbjct: 416 LVVILNACSHSGLVEEGLRWFESMTVQHGIVPD 448
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 16/230 (6%)
Query: 85 HLIFTIVSLSAP---MSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMS 141
H+ T++S A M A +F + N +W +I GY AL +R+M
Sbjct: 246 HIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIAL 305
Query: 142 CVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESA 201
V+P+ T+ L A + ++R G+ +H I+ V +SL+ +Y+ G E++
Sbjct: 306 GVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEAS 365
Query: 202 HKVFE------------SMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAE 249
+VF +M A +G ++AL + +M V+P+ T+V +L+AC+
Sbjct: 366 ERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSH 425
Query: 250 LGALELG-RRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEM 298
G +E G R ++ G+ + L+DL + G +E + EM
Sbjct: 426 SGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEM 475
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 119/306 (38%), Gaps = 47/306 (15%)
Query: 204 VFESMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYL 263
V +S + A ++A++ ++ G+ + SLL C + +L+ G+ +H +L
Sbjct: 13 VAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHL 72
Query: 264 LKAGL-RENLHVVNALLDLYAKCGS-------------------------------IREA 291
G R N + N L+ +Y KCG + A
Sbjct: 73 KITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRA 132
Query: 292 QQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHC 351
+ VF M ER+VVSW T+++G A +G + E +F G+L AC
Sbjct: 133 RVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKS 192
Query: 352 GMLDEGFDYFRRMKEEYGIAPRIEH--YGC-MVDLLSRAGLVKQAYEYIQNMPVQPNAVI 408
L R+ + +A + + C ++D ++ G ++ A M V+ + I
Sbjct: 193 RQLQLN----RQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVK-DIHI 247
Query: 409 WRTLLGACTIHGHLSLG--EIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSM 466
W TL I G+ LG E A ++ K+ + L Y + + + M
Sbjct: 248 WTTL-----ISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKM 302
Query: 467 LQDGVK 472
+ GVK
Sbjct: 303 IALGVK 308
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 266 bits (679), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 156/462 (33%), Positives = 246/462 (53%), Gaps = 31/462 (6%)
Query: 42 LPHVLTKCISL--LQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSY 99
P+VL C L +Q+ + +H F ++ G + N + L+ + ++Y
Sbjct: 110 FPYVLKACSGLRDIQFGSC-------VHGFVVKTGFEV-NMYVSTCLLHMYMC-CGEVNY 160
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
VF I NV W ++I G+ + A+ +R+M + V+ + LL A +
Sbjct: 161 GLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGR 220
Query: 160 SLNVREGEALHSVTIKNGFESL--------VFVRNSLLHIYAACGDTESAHKVFESMTDR 211
++ G+ H GF+ V + SL+ +YA CGD +A +F+ M +R
Sbjct: 221 CKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPER 280
Query: 212 -----------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVH 260
++ NG EAL +F +M G+ PD T +S++ A G +LG+ +H
Sbjct: 281 TLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIH 340
Query: 261 VYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGX 320
Y+ K G ++ +V AL+++YAK G A++ F ++E+++ ++WT +I+GLA +G G
Sbjct: 341 AYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGN 400
Query: 321 XXXXXXXXXXXQKLA-PGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGC 379
+ A P IT++GVLYACSH G+++EG YF M++ +G+ P +EHYGC
Sbjct: 401 EALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGC 460
Query: 380 MVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKH 439
MVD+LSRAG ++A ++ MPV+PN IW LL C IH +L L + RS + + E
Sbjct: 461 MVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELG 520
Query: 440 SGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVE 481
SG YVLLSN+YA RW DV+ IR+SM V K G+S VE
Sbjct: 521 SGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 185 bits (469), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 200/420 (47%), Gaps = 37/420 (8%)
Query: 41 PLPHVLTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIF-TIVSLSAPMSY 99
P+ L C SL++ L Q+H I+ V + + + + F T + +SY
Sbjct: 8 PILSQLENCRSLVE--------LNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSY 59
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A VF I P+V+ WN+MIRGY+ S +P AL FY++M PD T+P++LKA S
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSG 119
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE-----------SM 208
+++ G +H +K GFE ++V LLH+Y CG+ +VFE S+
Sbjct: 120 LRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSL 179
Query: 209 TDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGL 268
F N R ++A+ FREM +NGV+ + +V LL AC + G+ H +L G
Sbjct: 180 ISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGF 239
Query: 269 RE--------NLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGX 320
N+ + +L+D+YAKCG +R A+ +F M ER +VSW ++I G + NG
Sbjct: 240 DPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAE 299
Query: 321 XXXXXXXXXXXQKLAPGEITFVGVLYAC--SHCGMLDEGFDYFRRMKEEYGIAPRIEHYG 378
+AP ++TF+ V+ A C L + + + G
Sbjct: 300 EALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAY---VSKTGFVKDAAIVC 356
Query: 379 CMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPK 438
+V++ ++ G + A + +++ + + + W ++ HGH G A S +++ K
Sbjct: 357 ALVNMYAKTGDAESAKKAFEDLE-KKDTIAWTVVIIGLASHGH---GNEALSIFQRMQEK 412
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 265 bits (676), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 145/452 (32%), Positives = 240/452 (53%), Gaps = 14/452 (3%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
K+IH ++ G L + + + + A VF + ++ WN+MI+GY
Sbjct: 228 KEIHRKCVKKGFEL--DEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYV 285
Query: 124 ESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVF 183
D K + +M + P T +L A S+S N+ G+ +H I++ + ++
Sbjct: 286 AKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIY 345
Query: 184 VRNSLLHIYAACGDTESAHKVFES-----------MTDRFALNGRPNEALTLFREMSANG 232
V SL+ +Y CG+ A VF M + G +A+ ++ +M + G
Sbjct: 346 VNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVG 405
Query: 233 VEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQ 292
V+PD T S+L AC++L ALE G+++H+ + ++ L + +++ALLD+Y+KCG+ +EA
Sbjct: 406 VKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAF 465
Query: 293 QVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCG 352
++F + +++VVSWT +I +G L P +T + VL AC H G
Sbjct: 466 RIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAG 525
Query: 353 MLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMP-VQPNAVIWRT 411
++DEG +F +M+ +YGI P IEHY CM+D+L RAG + +AYE IQ P NA + T
Sbjct: 526 LIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLST 585
Query: 412 LLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGV 471
L AC +H SLG+ L++ P + Y++L NLYAS W + +R M + G+
Sbjct: 586 LFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGL 645
Query: 472 KKTPGYSLVELGNRVYEFTMGDRSHPQSQDVY 503
+K PG S +E+ ++V F DRSH ++++VY
Sbjct: 646 RKKPGCSWIEMSDKVCHFFAEDRSHLRAENVY 677
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 204/460 (44%), Gaps = 69/460 (15%)
Query: 47 TKCISLLQYCASSKHKLKQIH-------AFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSY 99
+K +SLL+ C +S L++I +R V L K LI + S
Sbjct: 4 SKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVL-----CKSLINVYFTCKDHCSA 58
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALH-FYRQMTMSCVEPDTHTYPFLLKAVS 158
H+ +V+ WN+++ GY+++ L F R + S PD+ T+P ++KA
Sbjct: 59 RHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYG 118
Query: 159 KSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR------- 211
G +H++ +K+G+ V V +SL+ +YA E++ +VF+ M +R
Sbjct: 119 ALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNT 178
Query: 212 ----FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAG 267
F +G +AL LF M ++G EP+ ++ +SAC+ L LE G+ +H +K G
Sbjct: 179 VISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKG 238
Query: 268 LRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXX 327
+ +V +AL+D+Y KC + A++VF +M +++V+W ++I G G
Sbjct: 239 FELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILN 298
Query: 328 XXXXQKLAPGEITFVGVLYACS--------------------------HCGMLDEGFD-- 359
+ P + T +L ACS +C ++D F
Sbjct: 299 RMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCG 358
Query: 360 -------YFRRMKEEYGIAPRIEHYGCMV-DLLSRAGLVK--QAYEYIQNMPVQPNAVIW 409
F + +++ E + M+ +S K + Y+ + ++ V+P+ V +
Sbjct: 359 EANLAETVFSKTQKDVA-----ESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTF 413
Query: 410 RTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNL 449
++L AC+ L G+ + HL E + D +LLS L
Sbjct: 414 TSVLPACSQLAALEKGK--QIHLSISESRLETDELLLSAL 451
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/470 (32%), Positives = 241/470 (51%), Gaps = 17/470 (3%)
Query: 50 ISLLQYCAS-SKHKLKQ-IHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMI 107
I+L+ C S +L + +H F IR G N + + + S A +F MI
Sbjct: 167 ITLVSACTKLSNSRLGRCVHGFVIRRG--FSNDLSLVNSLLNCYAKSRAFKEAVNLFKMI 224
Query: 108 RNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGE 167
+V +W+T+I Y ++ AL + M EP+ T +L+A + + ++ +G
Sbjct: 225 AEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGR 284
Query: 168 ALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE-----------SMTDRFALNG 216
H + I+ G E+ V V +L+ +Y C E A+ VF ++ F LNG
Sbjct: 285 KTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNG 344
Query: 217 RPNEALTLFREMS-ANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVV 275
+ ++ F M N PD +V +L +C+ELG LE + H Y++K G N +
Sbjct: 345 MAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIG 404
Query: 276 NALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXX-XXXXQKL 334
+L++LY++CGS+ A +VF + ++ V WT+LI G ++G G ++
Sbjct: 405 ASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEV 464
Query: 335 APGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAY 394
P E+TF+ +L ACSH G++ EG F+ M +Y +AP +EHY +VDLL R G + A
Sbjct: 465 KPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAI 524
Query: 395 EYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASER 454
E + MP P I TLLGAC IH + + E L +LE H+G Y+L+SN+Y +
Sbjct: 525 EITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKG 584
Query: 455 RWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYA 504
W +V+ +R S+ Q G+KK SL+E+ +V+ F D HP+ + VY
Sbjct: 585 EWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYG 634
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 195/409 (47%), Gaps = 31/409 (7%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A +F + +++ WNT+++ + + + L+ + M +PD T P LKA +
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 160 SLNVREGEALHSVTIKN-GFESLVFVRNSLLHIYAACGDTESAHKVFE-----------S 207
V GE +H K+ S ++V +SL+++Y CG A ++F+ S
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 208 MTDRFALNGRPNEALTLFREMS-ANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKA 266
M F NG P +A+ FR M A+ V PD T+++L+SAC +L LGR VH ++++
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 267 GLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXX 326
G +L +VN+LL+ YAK + +EA +F + E++V+SW+T+I NG
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVF 252
Query: 327 XXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKE---EYGIAPRIEHYGCMVDL 383
P T + VL AC+ L++G R+ E G+ ++ +VD+
Sbjct: 253 NDMMDDGTEPNVATVLCVLQACAAAHDLEQG----RKTHELAIRKGLETEVKVSTALVDM 308
Query: 384 LSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHG--HLSLGEIARSHLLKLEPKHSG 441
+ ++AY +P + + V W L+ T++G H S+ E + ++ LE
Sbjct: 309 YMKCFSPEEAYAVFSRIP-RKDVVSWVALISGFTLNGMAHRSIEEFS---IMLLENNTRP 364
Query: 442 DYVLLSNLYASERRWTDVQTIR---KSMLQDGVKKTP--GYSLVELGNR 485
D +L+ + S ++ + +++ G P G SLVEL +R
Sbjct: 365 DAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSR 413
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 140/401 (34%), Positives = 208/401 (51%), Gaps = 15/401 (3%)
Query: 97 MSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKA 156
M A VF + +V TW MI GY E D + AL R M V P+ T L+
Sbjct: 269 MDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSV 328
Query: 157 VSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFA--- 213
+L V +G+ LH ++ S + + SL+ +YA C + +VF +
Sbjct: 329 CGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPW 388
Query: 214 --------LNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLK 265
N ++AL LF+ M VEP+ T+ SLL A A L L +H YL K
Sbjct: 389 SAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTK 448
Query: 266 AGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXX 321
G +L L+ +Y+KCG++ A ++F ++E+ +VV W LI G ++G G
Sbjct: 449 TGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHN 508
Query: 322 XXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMV 381
+ P EITF L ACSH G+++EG FR M E Y R HY C+V
Sbjct: 509 ALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIV 568
Query: 382 DLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSG 441
DLL RAG + +AY I +P +P + +W LL AC H ++ LGE+A + L +LEP+++G
Sbjct: 569 DLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTG 628
Query: 442 DYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVEL 482
+YVLL+N+YA+ RW D++ +R M G++K PG+S +E+
Sbjct: 629 NYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 161/326 (49%), Gaps = 26/326 (7%)
Query: 51 SLLQYCASSKH--KLKQIHAFSIRHGVPLHNPDMGKHLIFTI---VSLSAPMSYAHLVFT 105
SLL + A+++ K K +H I G + H++ T+ +L ++YA +F
Sbjct: 20 SLLNHFAATQSISKTKALHCHVITGG------RVSGHILSTLSVTYALCGHITYARKLFE 73
Query: 106 MIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMT---MSCVEPDTHTYPFLLKAVSKSLN 162
+ ++ ++N +IR Y A+ + +M + CV PD +TYPF+ KA + +
Sbjct: 74 EMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCV-PDGYTYPFVAKAAGELKS 132
Query: 163 VREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR----------- 211
++ G +H +++ F +V+N+LL +Y G E A VF+ M +R
Sbjct: 133 MKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISG 192
Query: 212 FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLREN 271
+ NG N+AL +F M V+ D T+VS+L C L LE+GR VH + + L +
Sbjct: 193 YYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDK 252
Query: 272 LHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXX 331
+ V NAL+++Y KCG + EA+ VF ME R+V++WT +I G +G
Sbjct: 253 IEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQF 312
Query: 332 QKLAPGEITFVGVLYACSHCGMLDEG 357
+ + P +T ++ C +++G
Sbjct: 313 EGVRPNAVTIASLVSVCGDALKVNDG 338
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/422 (35%), Positives = 229/422 (54%), Gaps = 22/422 (5%)
Query: 117 TMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL-HSVTIK 175
T+I Y+ + + A + +M E D + ++ A + L++ +L + ++ K
Sbjct: 909 TLIDFYSATGRIREARKVFDEMP----ERDDIAWTTMVSAYRRVLDMDSANSLANQMSEK 964
Query: 176 NGFESLVFVRNSLLHIYAACGDTESAHKVFE-----------SMTDRFALNGRPNEALTL 224
N S N L++ Y G+ E A +F +M ++ N R EA+ +
Sbjct: 965 NEATS-----NCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAV 1019
Query: 225 FREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAK 284
F +M G+ PD T+ +++SACA LG LE+G+ VH+Y L+ G ++++ +AL+D+Y+K
Sbjct: 1020 FYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSK 1079
Query: 285 CGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGV 344
CGS+ A VF + ++N+ W ++I GLA +GF + + P +TFV V
Sbjct: 1080 CGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSV 1139
Query: 345 LYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQP 404
AC+H G++DEG +R M ++Y I +EHYG MV L S+AGL+ +A E I NM +P
Sbjct: 1140 FTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEP 1199
Query: 405 NAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRK 464
NAVIW LL C IH +L + EIA + L+ LEP +SG Y LL ++YA + RW DV IR
Sbjct: 1200 NAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRG 1259
Query: 465 SMLQDGVKKT-PGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTE 523
M + G++K PG S + + R + F D+SH S +V GYV TE
Sbjct: 1260 RMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQETE 1319
Query: 524 NV 525
NV
Sbjct: 1320 NV 1321
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 140/318 (44%), Gaps = 32/318 (10%)
Query: 103 VFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLN 162
T ++ PNVF +N + +G+ P +L Y +M V P ++TY L+KA S
Sbjct: 827 TMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKA--SSFA 884
Query: 163 VREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEAL 222
R GE+L + K GF V ++ +L+ Y+A G A KVF+ M +R
Sbjct: 885 SRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPER----------- 933
Query: 223 TLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLY 282
D +++SA + ++ L +N N L++ Y
Sbjct: 934 -------------DDIAWTTMVSAYRRVLDMDSANS----LANQMSEKNEATSNCLINGY 976
Query: 283 AKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFV 342
G++ +A+ +F +M ++++SWTT+I G + N + + P E+T
Sbjct: 977 MGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMS 1036
Query: 343 GVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPV 402
V+ AC+H G+L+ G + + G + +VD+ S+ G +++A N+P
Sbjct: 1037 TVISACAHLGVLEIGKEVHMYTLQN-GFVLDVYIGSALVDMYSKCGSLERALLVFFNLP- 1094
Query: 403 QPNAVIWRTLLGACTIHG 420
+ N W +++ HG
Sbjct: 1095 KKNLFCWNSIIEGLAAHG 1112
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 119/229 (51%), Gaps = 13/229 (5%)
Query: 97 MSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKA 156
+ A +F + ++ +W TMI+GY++++ + A+ + +M + PD T ++ A
Sbjct: 982 LEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISA 1041
Query: 157 VSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVF----------- 205
+ + G+ +H T++NGF V++ ++L+ +Y+ CG E A VF
Sbjct: 1042 CAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCW 1101
Query: 206 ESMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLK 265
S+ + A +G EAL +F +M V+P+ T VS+ +AC G ++ GRR++ ++
Sbjct: 1102 NSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMID 1161
Query: 266 A-GLRENLHVVNALLDLYAKCGSIREAQQVFGEME-ERNVVSWTTLIVG 312
+ N+ ++ L++K G I EA ++ G ME E N V W L+ G
Sbjct: 1162 DYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDG 1210
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 150/447 (33%), Positives = 227/447 (50%), Gaps = 47/447 (10%)
Query: 103 VFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVS-KSL 161
VF + F WN MI G+A + L +++M S +PD +T+ L+ A S S
Sbjct: 160 VFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSS 219
Query: 162 NVREGEALHSVTIKNGFESLVFVRNSLLHIYA---------------------------- 193
NV G +H+V +KNG+ S V +NS+L Y
Sbjct: 220 NVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIID 279
Query: 194 AC---GDTESAHKVF-----------ESMTDRFALNGRPNEALTLFREMSANGVEPDGFT 239
AC G+TE A +VF +M + NG +AL F EM +GV+ D F
Sbjct: 280 ACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFA 339
Query: 240 VVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEME 299
++L AC+ L L G+ +H L+ G + +V NAL++LYAKCG I+EA + FG++
Sbjct: 340 YGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIA 399
Query: 300 ERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFD 359
+++VSW T++ V+G + P +TF+G+L CSH G+++EG
Sbjct: 400 NKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCM 459
Query: 360 YFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYE----YIQNMPVQPNAVIWRTLLGA 415
F M ++Y I ++H CM+D+ R G + +A + Y + N W TLLGA
Sbjct: 460 IFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGA 519
Query: 416 CTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTP 475
C+ H H LG L EP +VLLSNLY S RW + + +R+ M++ G+KKTP
Sbjct: 520 CSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTP 579
Query: 476 GYSLVELGNRVYEFTMGDRSHPQSQDV 502
G S +E+GN+V F +GD SHP+ +++
Sbjct: 580 GCSWIEVGNQVSTFVVGDSSHPRLEEL 606
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 168/407 (41%), Gaps = 86/407 (21%)
Query: 94 SAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFL 153
S ++ A VF + + WNTM+ Y+ + A+ + Q+ S +PD +++ +
Sbjct: 17 SGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAI 76
Query: 154 LKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-- 211
L + NV+ G + S+ I++GF + + V NSL+ +Y C DT SA+KVF M
Sbjct: 77 LSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSR 136
Query: 212 ---------------------------------FALN---------GRPNEALTLFREMS 229
FA N G+ L+LF+EM
Sbjct: 137 NEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEML 196
Query: 230 ANGVEPDGFTVVSLLSAC-AELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGS- 287
+ +PD +T SL++AC A+ + GR VH +LK G + N++L Y K GS
Sbjct: 197 ESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSR 256
Query: 288 ---IREAQQV-----------------FGEME----------ERNVVSWTTLIVGLAVNG 317
+RE + + GE E E+N+V+WTT+I G NG
Sbjct: 257 DDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNG 316
Query: 318 FGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHY 377
G + + VL+ACS +L G +M I + Y
Sbjct: 317 DGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHG-----KMIHGCLIHCGFQGY 371
Query: 378 G----CMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHG 420
+V+L ++ G +K+A ++ + V W T+L A +HG
Sbjct: 372 AYVGNALVNLYAKCGDIKEADRAFGDIA-NKDLVSWNTMLFAFGVHG 417
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 18/199 (9%)
Query: 182 VFVR-NSLLHIYAACGDTESAHKVFESM--TDRFALN---------GRPNEALTLFREMS 229
V VR S + A G SA +VF+ M D A N G EA+ LF ++
Sbjct: 3 VLVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLR 62
Query: 230 ANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIR 289
+ +PD ++ ++LS CA LG ++ GR++ ++++G +L V N+L+D+Y KC
Sbjct: 63 FSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTL 122
Query: 290 EAQQVFGEM--EERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYA 347
A +VF +M + RN V+W +L+ +N +++A + ++
Sbjct: 123 SANKVFRDMCCDSRNEVTWCSLLFAY-MNAEQFEAALDVFVEMPKRVA---FAWNIMISG 178
Query: 348 CSHCGMLDEGFDYFRRMKE 366
+HCG L+ F+ M E
Sbjct: 179 HAHCGKLESCLSLFKEMLE 197
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 90/227 (39%), Gaps = 35/227 (15%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A F I N ++ +WNTM+ + AL Y M S ++PD T+ LL S
Sbjct: 391 ADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSH 450
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHI-YAACGDTESAHKVFESMTDRFALNGRP 218
S V EG + FES+V L + + C M D F G
Sbjct: 451 SGLVEEGCMI--------FESMVKDYRIPLEVDHVTC------------MIDMFGRGGHL 490
Query: 219 NEALTLFREMSANGVE-PDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNA 277
EA L S+ + + + +LL AC+ ELGR V L A E + V
Sbjct: 491 AEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFV-L 549
Query: 278 LLDLYAKCGSIREAQQVFGEMEERNV-----VSW-------TTLIVG 312
L +LY G +E + V EM ER + SW +T +VG
Sbjct: 550 LSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVG 596
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 143/401 (35%), Positives = 230/401 (57%), Gaps = 29/401 (7%)
Query: 116 NTMIRGYAESQDP-KPALHFYRQMTMSCVEPDTHTYPFLLKAVS-KSLNVREGEALHSVT 173
N ++ Y ES +P K L F + S D+ + F +K S + + +G +H++
Sbjct: 32 NHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALV 91
Query: 174 IKNGFESLVFVRNSLLHIYAACGDTESAHKVFE------------SMTDRFALNGRPNEA 221
K GF +++ ++ SL+ Y++ GD + A +VF+ +M + N EA
Sbjct: 92 RKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEA 151
Query: 222 LTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLR--ENLHVVNALL 279
+ LF+ M A +E DG V LSACA+LGA+++G ++ +K R +L + N+LL
Sbjct: 152 IELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLL 211
Query: 280 DLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGX------XXXXXXXXXXXQK 333
++Y K G +A+++F E ++V ++T++I G A+NG
Sbjct: 212 NMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTV 271
Query: 334 LAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQA 393
+ P ++TF+GVL ACSH G+++EG +F+ M +Y + PR H+GCMVDL R+G +K A
Sbjct: 272 ITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDA 331
Query: 394 YEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASE 453
+E+I MP++PN VIWRTLLGAC++HG++ LGE + + +L+ H GDYV LSN+YAS+
Sbjct: 332 HEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASK 391
Query: 454 RRWTDVQTIRKSMLQDGVKK--TPGYSLVELGNRVYEFTMG 492
W + KS ++D V+K PG S +ELG+ + EF G
Sbjct: 392 GMWDE-----KSKMRDRVRKRRMPGKSWIELGSIINEFVSG 427
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 117/245 (47%), Gaps = 22/245 (8%)
Query: 95 APMSYAHLVFTMI-RNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFL 153
+ YA VF N+ W MI Y E+++ A+ +++M +E D
Sbjct: 114 GDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVA 173
Query: 154 LKAVSKSLNVREGEALHSVTIKNG--FESLVFVRNSLLHIYAACGDTESAHKVFE----- 206
L A + V+ GE ++S +IK + +RNSLL++Y G+TE A K+F+
Sbjct: 174 LSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRK 233
Query: 207 ------SMTDRFALNGRPNEALTLFREMSA------NGVEPDGFTVVSLLSACAELGALE 254
SM +ALNG+ E+L LF++M + P+ T + +L AC+ G +E
Sbjct: 234 DVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVE 293
Query: 255 LGRR-VHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEER-NVVSWTTLIVG 312
G+R ++ L+ ++DL+ + G +++A + +M + N V W TL+
Sbjct: 294 EGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGA 353
Query: 313 LAVNG 317
+++G
Sbjct: 354 CSLHG 358
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 262 bits (670), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 169/574 (29%), Positives = 282/574 (49%), Gaps = 34/574 (5%)
Query: 42 LPHVLTKCISLLQYCASSK--HKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSY 99
+P+ +T +S + C+ K ++ ++H+ +++ G + + +G L+ + S +
Sbjct: 349 VPNAVT-IMSAVSACSCLKVINQGSEVHSIAVKMGF-IDDVLVGNSLV-DMYSKCGKLED 405
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A VF ++N +V+TWN+MI GY ++ A + +M + + P+ T+ ++ K
Sbjct: 406 ARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIK 465
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPN 219
N EGEA+ L G + + + + NG+ +
Sbjct: 466 --NGDEGEAM-----------------DLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKD 506
Query: 220 EALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALL 279
EAL LFR+M + P+ T++SLL ACA L ++ R +H +L+ L V NAL
Sbjct: 507 EALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALT 566
Query: 280 DLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEI 339
D YAK G I ++ +F ME +++++W +LI G ++G Q + P
Sbjct: 567 DTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRG 626
Query: 340 TFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQN 399
T ++ A G +DEG F + +Y I P +EH MV L RA +++A ++IQ
Sbjct: 627 TLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQE 686
Query: 400 MPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDV 459
M +Q IW + L C IHG + + A +L LEP+++ ++S +YA +
Sbjct: 687 MNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRS 746
Query: 460 QTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYV 519
K + +KK G S +E+ N ++ FT GD+S + +Y
Sbjct: 747 LEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMSRLDN----- 801
Query: 520 PRTENVLAD--IEEEEKEQALSYHSEKVAIAFMLLNT--APGTPIRVMKNLRVCADCHMA 575
R++ + IEEE +E+ HSEK A+AF L+++ A T IR++KNLR+C DCH
Sbjct: 802 -RSDQYNGELWIEEEGREETCGIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDT 860
Query: 576 IKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
K +SK Y +I++ D HHF+ G CSCKDYW
Sbjct: 861 AKYVSKRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 165/354 (46%), Gaps = 27/354 (7%)
Query: 101 HLVFTMIRNPNVF---TWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAV 157
+L FT + PN+ ++ + R + + K ++Q + + TY LL++
Sbjct: 36 NLSFTKKKEPNIIPDEQFDYLCRNGSLLEAEKALDSLFQQGS----KVKRSTYLKLLESC 91
Query: 158 SKSLNVREGEALHSVTIKNGF--ESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---- 211
S ++ G LH+ + G E VFV LL +YA CG A KVF+SM +R
Sbjct: 92 IDSGSIHLGRILHA---RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFT 148
Query: 212 -------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLL 264
++ R E LFR M +GV PD F +L CA G +E G+ +H ++
Sbjct: 149 WSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVI 208
Query: 265 KAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXX 324
K G+ L V N++L +YAKCG + A + F M ER+V++W ++++ NG
Sbjct: 209 KLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVE 268
Query: 325 XXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLL 384
+ ++PG +T+ ++ + G D D ++M E +GI + + M+ L
Sbjct: 269 LVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM-ETFGITADVFTWTAMISGL 327
Query: 385 SRAGLVKQAYEYIQNM---PVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKL 435
G+ QA + + M V PNAV + + AC+ ++ G S +K+
Sbjct: 328 IHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKM 381
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 160/370 (43%), Gaps = 27/370 (7%)
Query: 52 LLQYCASSK--HKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRN 109
+LQ CA+ K IH+ I+ G + + + I + + + +A F +R
Sbjct: 187 ILQGCANCGDVEAGKVIHSVVIKLG--MSSCLRVSNSILAVYAKCGELDFATKFFRRMRE 244
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
+V WN+++ Y ++ + A+ ++M + P T+ L+ ++ L
Sbjct: 245 RDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDL 304
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMS 229
G + VF + +M NG +AL +FR+M
Sbjct: 305 MQKMETFGITADVFT--------------------WTAMISGLIHNGMRYQALDMFRKMF 344
Query: 230 ANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIR 289
GV P+ T++S +SAC+ L + G VH +K G +++ V N+L+D+Y+KCG +
Sbjct: 345 LAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLE 404
Query: 290 EAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACS 349
+A++VF ++ ++V +W ++I G G+ L P IT+ ++
Sbjct: 405 DARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYI 464
Query: 350 HCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQ---PNA 406
G E D F+RM+++ + + ++ + G +A E + M PN+
Sbjct: 465 KNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNS 524
Query: 407 VIWRTLLGAC 416
V +LL AC
Sbjct: 525 VTILSLLPAC 534
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 167/423 (39%), Gaps = 92/423 (21%)
Query: 50 ISLLQYC--ASSKHKLKQIHAFSIRHGVPLHNPDMG-KHLIFTIVSLSAPMSYAHLVFTM 106
+ LL+ C + S H + +HA R G+ PD+ + + ++ + ++ A VF
Sbjct: 85 LKLLESCIDSGSIHLGRILHA---RFGL-FTEPDVFVETKLLSMYAKCGCIADARKVFDS 140
Query: 107 IRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREG 166
+R N+FTW+ MI Y+ + +R M V PD +P +L+ + +V G
Sbjct: 141 MRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAG 200
Query: 167 EALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALN 215
+ +HSV IK G S + V NS+L +YA CG+ + A K F M +R + N
Sbjct: 201 KVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQN 260
Query: 216 GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVV 275
G+ EA+ L +EM G+ P T L+ +LG
Sbjct: 261 GKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGK----------------------C 298
Query: 276 NALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLA 335
+A +DL K + FG + V +WT +I GL NG +
Sbjct: 299 DAAMDLMQK-------METFGITAD--VFTWTAMISGLIHNGMRYQALDMFRKMFLAGVV 349
Query: 336 PGEITFVGVLYAC-----------------------------------SHCGMLDEGFDY 360
P +T + + AC S CG L++
Sbjct: 350 PNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKV 409
Query: 361 FRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEY---IQNMPVQPNAVIWRTLLGACT 417
F +K + + + M+ +AG +AYE +Q+ ++PN + W T++
Sbjct: 410 FDSVKNK-----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYI 464
Query: 418 IHG 420
+G
Sbjct: 465 KNG 467
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 262 bits (669), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 161/468 (34%), Positives = 244/468 (52%), Gaps = 24/468 (5%)
Query: 54 QYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHL--IFTIVSLSAPMSYAHLVFTMIRNPN 111
Q C + K ++K H+ I HG+ + + K L + +L+ YA +F I PN
Sbjct: 19 QRCNTVK-QIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPN 77
Query: 112 VFTWNTMIRGYAESQDPKPALHFYRQMTMS---CVEPDTHTYPFLLKAVSKSLNVREGEA 168
F ++TMIR + S P L ++ M + P T+ FL+ A K+ G+
Sbjct: 78 SFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQ 137
Query: 169 LHSVTIKNG-FESLVFVRNSLLHIYAACGDTESAHKVFES-----------MTDRFALNG 216
+H +KNG F S V+ +L IY A KVF+ + + + G
Sbjct: 138 IHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCG 197
Query: 217 RPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKA-GLRENLHVV 275
+E L +F+EM G+EPD F+V + L+ACA++GAL G+ +H ++ K + ++ V
Sbjct: 198 LGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVG 257
Query: 276 NALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQK-L 334
AL+D+YAKCG I A +VF ++ RNV SW LI G A G+ + +
Sbjct: 258 TALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGI 317
Query: 335 APGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAY 394
P + +GVL AC+H G L+EG M+ YGI P+ EHY C+VDL+ RAG + A
Sbjct: 318 KPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDAL 377
Query: 395 EYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEP----KHSGDYVLLSNLY 450
+ I+ MP++P A +W LL C H ++ LGE+A +LL LE + V LSN+Y
Sbjct: 378 DLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIY 437
Query: 451 ASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQ 498
S +R + +R + Q G++KTPG+SL+E+ V +F GD SHP
Sbjct: 438 FSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPN 485
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 262 bits (669), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 155/491 (31%), Positives = 244/491 (49%), Gaps = 51/491 (10%)
Query: 63 LKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGY 122
LKQ+ +F I G+ + K L F + L +SYA +F PN + ++ Y
Sbjct: 40 LKQVQSFMIVSGLSHSHFLCFKLLRFCTLRL-CNLSYARFIFDRFSFPNTHLYAAVLTAY 98
Query: 123 AESQD--PKPALHFYRQMTMSCV-EPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFE 179
+ S A F+R M V P+ YP +LK+ + +H+ K+GF
Sbjct: 99 SSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFH 158
Query: 180 SLVFVRNSLLHIYAAC--------------------------------GDTESAHKVFES 207
V V+ +LLH YA+ GD +A +FE
Sbjct: 159 LYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFED 218
Query: 208 MTDR-----------FALNGRPNEALTLFREM-SANGVEPDGFTVVSLLSACAELGALEL 255
M +R NG EA++LFR M + + P+ TVV +LSACA+ G L+L
Sbjct: 219 MPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQL 278
Query: 256 GRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAV 315
+ +H + + L ++ V N+L+DLY KCG++ EA VF ++++ +W ++I A+
Sbjct: 279 AKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFAL 338
Query: 316 NGFGXXXXXX---XXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAP 372
+G + P ITF+G+L AC+H G++ +G YF M +GI P
Sbjct: 339 HGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEP 398
Query: 373 RIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHL 432
RIEHYGC++DLL RAG +A E + M ++ + IW +LL AC IHGHL L E+A +L
Sbjct: 399 RIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNL 458
Query: 433 LKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMG 492
+ L P + G +++NLY W + + RK + K PG+S +E+ N V++F
Sbjct: 459 VALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSL 518
Query: 493 DRSHPQSQDVY 503
D+SHP+++++Y
Sbjct: 519 DKSHPETEEIY 529
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 261 bits (668), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 161/468 (34%), Positives = 243/468 (51%), Gaps = 24/468 (5%)
Query: 54 QYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHL--IFTIVSLSAPMSYAHLVFTMIRNPN 111
Q C + K ++K H+ I HG+ + + K L + +L+ YA +F I PN
Sbjct: 19 QRCNTVK-QIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPN 77
Query: 112 VFTWNTMIRGYAESQDPKPALHFYRQMTMS---CVEPDTHTYPFLLKAVSKSLNVREGEA 168
F ++TMIR + S P L ++ M + P T+ FL+ A K+ G+
Sbjct: 78 SFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQ 137
Query: 169 LHSVTIKNG-FESLVFVRNSLLHIYAACGDTESAHKVFES-----------MTDRFALNG 216
+H +KNG F S V+ +L IY A KVF+ + + + G
Sbjct: 138 IHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCG 197
Query: 217 RPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLK-AGLRENLHVV 275
+E L +FREM G+EPD F+V + L+ACA++GAL G+ +H ++ K + + ++ V
Sbjct: 198 LGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVG 257
Query: 276 NALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQK-L 334
AL+D+YAKCG I A +VF ++ RNV SW LI G A G+ + +
Sbjct: 258 TALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGI 317
Query: 335 APGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAY 394
P + +GVL AC+H G L+EG M+ Y I P+ EHY C+VDL+ RAG + A
Sbjct: 318 KPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDAL 377
Query: 395 EYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEP----KHSGDYVLLSNLY 450
I+ MP++P A +W LL C H ++ LGE+A +LL LE + V LSN+Y
Sbjct: 378 NLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIY 437
Query: 451 ASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQ 498
S +R + +R + Q GV+KTPG+S++E+ V +F GD SHP
Sbjct: 438 FSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPN 485
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 151/435 (34%), Positives = 233/435 (53%), Gaps = 24/435 (5%)
Query: 66 IHAFSIRHGVPLHNPDMGKHLIFTIVSLSA---PMSYAHLVFTMIRNPNVFTWNTMIRGY 122
IH ++++G+ D ++ ++V + A M A VF I N W +++GY
Sbjct: 131 IHGLAMKNGL-----DKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGY 185
Query: 123 AE-SQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGF-ES 180
+ S+DP+ + M + + D T L+KA + G+ +H V+I+ F +
Sbjct: 186 LKYSKDPE-VFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQ 244
Query: 181 LVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMS 229
+++ S++ +Y C ++A K+FE+ DR FA R EA LFR+M
Sbjct: 245 SDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQML 304
Query: 230 ANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIR 289
+ P+ T+ ++L +C+ LG+L G+ VH Y+++ G+ + + +D+YA+CG+I+
Sbjct: 305 RESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQ 364
Query: 290 EAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACS 349
A+ VF M ERNV+SW+++I +NG Q + P +TFV +L ACS
Sbjct: 365 MARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACS 424
Query: 350 HCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIW 409
H G + EG+ F M +YG+ P EHY CMVDLL RAG + +A +I NMPV+P A W
Sbjct: 425 HSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAW 484
Query: 410 RTLLGACTIHGHLSL-GEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQ 468
LL AC IH + L GEIA LL +EP+ S YVLLSN+YA W V +R+ M
Sbjct: 485 GALLSACRIHKEVDLAGEIAE-KLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGI 543
Query: 469 DGVKKTPGYSLVELG 483
G +K G S E+G
Sbjct: 544 KGYRKHVGQSATEVG 558
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 173/380 (45%), Gaps = 20/380 (5%)
Query: 57 ASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMI--RNPNVFT 114
A + + +Q+HA I HG +G L + S + +A F I N +
Sbjct: 17 AKTLNHTQQVHAKVIIHGFE-DEVVLGSSLTNAYIQ-SNRLDFATSSFNRIPCWKRNRHS 74
Query: 115 WNTMIRGYAESQDP--KPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSV 172
WNT++ GY++S+ L Y +M C D+ F +KA + G +H +
Sbjct: 75 WNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGL 134
Query: 173 TIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFAL-----------NGRPNEA 221
+KNG + +V SL+ +YA G ESA KVF+ + R ++ + E
Sbjct: 135 AMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEV 194
Query: 222 LTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVH-VYLLKAGLRENLHVVNALLD 280
LF M G+ D T++ L+ AC + A ++G+ VH V + ++ + ++ ++ +++D
Sbjct: 195 FRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIID 254
Query: 281 LYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEIT 340
+Y KC + A+++F +RNVV WTTLI G A + + P + T
Sbjct: 255 MYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCT 314
Query: 341 FVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNM 400
+L +CS G L G M GI ++ +D+ +R G ++ A M
Sbjct: 315 LAAILVSCSSLGSLRHGKSVHGYMIRN-GIEMDAVNFTSFIDMYARCGNIQMARTVFDMM 373
Query: 401 PVQPNAVIWRTLLGACTIHG 420
P + N + W +++ A I+G
Sbjct: 374 P-ERNVISWSSMINAFGING 392
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 118/281 (41%), Gaps = 26/281 (9%)
Query: 153 LLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESM---- 208
LL +S++ + + +H+ I +GFE V + +SL + Y + A F +
Sbjct: 10 LLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWK 69
Query: 209 TDRFALNGRPN-----------EALTLFREMSANGVEPDGFTVVSLLSACAELGALELGR 257
+R + N + + L L+ M + D F +V + AC LG LE G
Sbjct: 70 RNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGI 129
Query: 258 RVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNG 317
+H +K GL ++ +V +L+++YA+ G++ AQ+VF E+ RN V W L+ G
Sbjct: 130 LIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYS 189
Query: 318 FGXXXXXXXXXXXXQKLAPGEITFVGVLYACSH-----CGMLDEGFDYFRRMKEEYGIAP 372
LA +T + ++ AC + G G R ++
Sbjct: 190 KDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQ 249
Query: 373 RIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLL 413
++D+ + L+ A + + V N V+W TL+
Sbjct: 250 -----ASIIDMYVKCRLLDNARKLFET-SVDRNVVMWTTLI 284
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 141/412 (34%), Positives = 213/412 (51%), Gaps = 11/412 (2%)
Query: 103 VFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLN 162
+F + +V +W ++I Y A+ + +M S V P+ T+ + A +
Sbjct: 266 LFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSR 325
Query: 163 VREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR----------- 211
+ GE LH + G + V NS++ +Y+ CG+ SA +F+ M R
Sbjct: 326 LVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGG 385
Query: 212 FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLREN 271
+ G E F M +G +P F + SLLS + +E GR+VH L GL +N
Sbjct: 386 YCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQN 445
Query: 272 LHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXX 331
V ++L+++Y+KCGSI+EA +FGE + ++VS T +I G A +G
Sbjct: 446 STVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLK 505
Query: 332 QKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVK 391
P +TF+ VL AC+H G LD GF YF M+E Y + P EHYGCMVDLL RAG +
Sbjct: 506 VGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLS 565
Query: 392 QAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYA 451
A + I M + + V+W TLL AC G + G A +L+L+P + V L+N+Y+
Sbjct: 566 DAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYS 625
Query: 452 SERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVY 503
S + +RK+M GV K PG+S +++ + V F GDR HPQS+D+Y
Sbjct: 626 STGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIY 677
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 151/329 (45%), Gaps = 15/329 (4%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMS--CVEPDTHTYPFLLKAV 157
A VF + + ++ +W ++I+ Y + + AL + M + V PDT +LKA
Sbjct: 59 ARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKAC 118
Query: 158 SKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALN-- 215
+S N+ GE+LH+ +K S V+V +SLL +Y G + + +VF M R A+
Sbjct: 119 GQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWT 178
Query: 216 ---------GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKA 266
GR E LT F EMS + D +T L ACA L ++ G+ +H +++
Sbjct: 179 AIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVR 238
Query: 267 GLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXX 326
G L V N+L +Y +CG +++ +F M ER+VVSWT+LIV G
Sbjct: 239 GFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETF 298
Query: 327 XXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSR 386
++ P E TF + AC+ L G + G+ + M+ + S
Sbjct: 299 IKMRNSQVPPNEQTFASMFSACASLSRLVWG-EQLHCNVLSLGLNDSLSVSNSMMKMYST 357
Query: 387 AGLVKQAYEYIQNMPVQPNAVIWRTLLGA 415
G + A Q M + + + W T++G
Sbjct: 358 CGNLVSASVLFQGMRCR-DIISWSTIIGG 385
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 131/282 (46%), Gaps = 17/282 (6%)
Query: 51 SLLQYCASSKHKL--KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIR 108
S+ CAS + +Q+H + G L++ + + + S + A ++F +R
Sbjct: 315 SMFSACASLSRLVWGEQLHCNVLSLG--LNDSLSVSNSMMKMYSTCGNLVSASVLFQGMR 372
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
++ +W+T+I GY ++ + ++ M S +P LL + G
Sbjct: 373 CRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQ 432
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVF-----------ESMTDRFALNGR 217
+H++ + G E VR+SL+++Y+ CG + A +F +M + +A +G+
Sbjct: 433 VHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGK 492
Query: 218 PNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKA-GLRENLHVVN 276
EA+ LF + G PD T +S+L+AC G L+LG + + +R
Sbjct: 493 SKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYG 552
Query: 277 ALLDLYAKCGSIREAQQVFGEME-ERNVVSWTTLIVGLAVNG 317
++DL + G + +A+++ EM +++ V WTTL++ G
Sbjct: 553 CMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKG 594
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/502 (29%), Positives = 254/502 (50%), Gaps = 50/502 (9%)
Query: 50 ISLLQYCA--SSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMI 107
IS+L CA + K+IH++ +RH L + +G LI + + S A+ F+++
Sbjct: 334 ISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALI-SFYARFGDTSAAYWAFSLM 392
Query: 108 RNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGE 167
++ +WN ++ +A+S L+ + + D+ T LLK + + +
Sbjct: 393 STKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVK 452
Query: 168 ALHSVTIKNGF---ESLVFVRNSLLHIYAACGDTESAHKVFESMTDR------------- 211
+H ++K G E + N+LL YA CG+ E AHK+F +++R
Sbjct: 453 EVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGY 512
Query: 212 ------------------------------FALNGRPNEALTLFREMSANGVEPDGFTVV 241
+A + PNEA+ +FRE+ A G+ P+ T++
Sbjct: 513 VNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIM 572
Query: 242 SLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEER 301
+LL CA+L +L L R+ H Y+++ GL + + + LLD+YAKCGS++ A VF R
Sbjct: 573 NLLPVCAQLASLHLVRQCHGYIIRGGLGD-IRLKGTLLDVYAKCGSLKHAYSVFQSDARR 631
Query: 302 NVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYF 361
++V +T ++ G AV+G G + P + +L AC H G++ +G +
Sbjct: 632 DLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIY 691
Query: 362 RRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGH 421
++ +G+ P +E Y C VDL++R G + AY ++ MPV+PNA IW TLL ACT +
Sbjct: 692 DSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNR 751
Query: 422 LSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVE 481
+ LG +HLL+ E +G++VL+SN+YA++ +W V +R M + +KK G S +E
Sbjct: 752 MDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLE 811
Query: 482 LGNRVYEFTMGDRSHPQSQDVY 503
+ + F GD SHP+ ++
Sbjct: 812 VDGQRNVFVSGDCSHPRRDSIF 833
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 136/295 (46%), Gaps = 21/295 (7%)
Query: 39 ENPLPHVLTKCISLLQYCA--SSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAP 96
+ P P +T I +L C + K +H++ I+ G+ + +G L+
Sbjct: 116 DEPKPSSVTFAI-VLPLCVRLGDSYNGKSMHSYIIKAGLE-KDTLVGNALVSMYAKFGFI 173
Query: 97 MSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLL-- 154
A+ F I + +V +WN +I G++E+ A + M EP+ T +L
Sbjct: 174 FPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPV 233
Query: 155 -KAVSKSLNVREGEALHSVTIKNGF-ESLVFVRNSLLHIYAACGDTESAHKVFESMTDR- 211
++ K++ R G +HS ++ + ++ VFV NSL+ Y G E A +F M +
Sbjct: 234 CASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKD 293
Query: 212 ----------FALNGRPNEALTLFREMSANG-VEPDGFTVVSLLSACAELGALELGRRVH 260
+A N +A LF + G V PD T++S+L CA+L L G+ +H
Sbjct: 294 LVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIH 353
Query: 261 VYLLK-AGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLA 314
Y+L+ + L E+ V NAL+ YA+ G A F M ++++SW ++ A
Sbjct: 354 SYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFA 408
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 164/390 (42%), Gaps = 59/390 (15%)
Query: 103 VFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMT-MSCVEPDTHTYPFLLKAVSKSL 161
+FT + + ++ +WN +I GYA + + A + + V PD+ T +L ++
Sbjct: 285 LFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLT 344
Query: 162 NVREGEALHSVTIKNGFE-SLVFVRNSLLHIYAACGDTESAHKVFESMT----------- 209
++ G+ +HS +++ + V N+L+ YA GDT +A+ F M+
Sbjct: 345 DLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAIL 404
Query: 210 DRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGL- 268
D FA + + + L L + + D T++SLL C + + + VH Y +KAGL
Sbjct: 405 DAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLL 464
Query: 269 --RENLHVVNALLDLYAKCGSIREAQQVF-GEMEERNVVSWTTLIVGLAVNGFGXXXXXX 325
E + NALLD YAKCG++ A ++F G E R +VS+ +L+ G +G
Sbjct: 465 HDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQML 524
Query: 326 XXXXXXQKLA-------------------------------PGEITFVGVLYACSHCGML 354
L P +T + +L C+ L
Sbjct: 525 FTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASL 584
Query: 355 DEGFDYFRRMKEEY---GIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRT 411
+ R Y G I G ++D+ ++ G +K AY Q+ + + V++
Sbjct: 585 -----HLVRQCHGYIIRGGLGDIRLKGTLLDVYAKCGSLKHAYSVFQS-DARRDLVMFTA 638
Query: 412 LLGACTIHGHLSLGEIARSHLLK--LEPKH 439
++ +HG + SH+ + ++P H
Sbjct: 639 MVAGYAVHGRGKEALMIYSHMTESNIKPDH 668
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 143/331 (43%), Gaps = 20/331 (6%)
Query: 103 VFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCV-EPDTHTYPFLLKAVSKSL 161
+F + + + WN ++ G + S + + F++ M + +P + T+ +L +
Sbjct: 78 MFRQMDSLDPVVWNIVLTGLSVSCG-RETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLG 136
Query: 162 NVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDT-ESAHKVFESMTDR--------- 211
+ G+++HS IK G E V N+L+ +YA G A+ F+ + D+
Sbjct: 137 DSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAII 196
Query: 212 --FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELG---ALELGRRVHVYLL-K 265
F+ N +A F M EP+ T+ ++L CA + A GR++H Y++ +
Sbjct: 197 AGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQR 256
Query: 266 AGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVN-GFGXXXXX 324
+ L+ ++ V N+L+ Y + G I EA +F M +++VSW +I G A N +
Sbjct: 257 SWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQL 316
Query: 325 XXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLL 384
++P +T + +L C+ L G + + + ++
Sbjct: 317 FHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFY 376
Query: 385 SRAGLVKQAYEYIQNMPVQPNAVIWRTLLGA 415
+R G AY M + + + W +L A
Sbjct: 377 ARFGDTSAAYWAFSLMSTK-DIISWNAILDA 406
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 12/222 (5%)
Query: 140 MSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTE 199
+S D + ++KA + ++ G ALH K G + V S+L++YA C +
Sbjct: 14 LSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMD 73
Query: 200 SAHKVFESMTD------RFALNGRP----NEALTLFREMS-ANGVEPDGFTVVSLLSACA 248
K+F M L G E + F+ M A+ +P T +L C
Sbjct: 74 DCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCV 133
Query: 249 ELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSI-REAQQVFGEMEERNVVSWT 307
LG G+ +H Y++KAGL ++ V NAL+ +YAK G I +A F + +++VVSW
Sbjct: 134 RLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWN 193
Query: 308 TLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACS 349
+I G + N + P T VL C+
Sbjct: 194 AIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCA 235
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 15/230 (6%)
Query: 225 FREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAK 284
FR +S G + F + ++ ACA + L GR +H + K G V ++L++YAK
Sbjct: 11 FRLLSGFGTDHRVF--LDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAK 68
Query: 285 CGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGV 344
C + + Q++F +M+ + V W ++ GL+V+ + P +TF V
Sbjct: 69 CRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPKPSSVTFAIV 128
Query: 345 LYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHY----GCMVDLLSRAGLV-KQAYEYIQN 399
L C G Y + Y I +E +V + ++ G + AY
Sbjct: 129 LPLCVRLGD-----SYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDG 183
Query: 400 MPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNL 449
+ + V W ++ + + ++ + RS L L+ +Y ++N+
Sbjct: 184 IA-DKDVVSWNAIIAGFSENNMMA--DAFRSFCLMLKEPTEPNYATIANV 230
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 144/393 (36%), Positives = 220/393 (55%), Gaps = 17/393 (4%)
Query: 103 VFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLN 162
VF + +V +W +I G+ + K AL + +M VEP+ TY +L + +
Sbjct: 163 VFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD---VEPNLATYVCVLVSSGRVGC 219
Query: 163 VREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESM--TDRFALNG---- 216
+ G+ +H + +K + N+L+ +Y C A +VF + D+ + N
Sbjct: 220 LSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISG 279
Query: 217 -----RPNEALTLFREM-SANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRE 270
R EA+ LF M +++G++PDG + S+LSACA LGA++ GR VH Y+L AG++
Sbjct: 280 LVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKW 339
Query: 271 NLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXX 330
+ H+ A++D+YAKCG I A ++F + +NV +W L+ GLA++G G
Sbjct: 340 DTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMV 399
Query: 331 XQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKE-EYGIAPRIEHYGCMVDLLSRAGL 389
P +TF+ L AC H G++DEG YF +MK EY + P++EHYGCM+DLL RAGL
Sbjct: 400 KLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGL 459
Query: 390 VKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHL-SLGEIARSHLLKLEPKHSGDYVLLSN 448
+ +A E ++ MPV+P+ I +L AC G L L + L +E + SG YVLLSN
Sbjct: 460 LDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSN 519
Query: 449 LYASERRWTDVQTIRKSMLQDGVKKTPGYSLVE 481
++A+ RRW DV IR+ M G+ K PG S +E
Sbjct: 520 IFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/397 (31%), Positives = 189/397 (47%), Gaps = 44/397 (11%)
Query: 50 ISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPM-SYAHLVFTMIR 108
+ L+ C SS KQI I L D+ + + T + SA SY+ ++ IR
Sbjct: 10 LELISRC-SSLRVFKQIQTQLITR--DLLRDDLIINKVVTFLGKSADFASYSSVILHSIR 66
Query: 109 NP-NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGE 167
+ + F++NT++ YA P+ + Y+ + PD T+P + KA K +REG+
Sbjct: 67 SVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGK 126
Query: 168 ALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNG 216
+H + K GF ++V+NSL+H Y CG++ +A KVF M R F G
Sbjct: 127 QIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTG 186
Query: 217 RPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVN 276
EAL F +M VEP+ T V +L + +G L LG+ +H +LK +L N
Sbjct: 187 LYKEALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGN 243
Query: 277 ALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGL--------AVNGFGXXXXXXXXX 328
AL+D+Y KC + +A +VFGE+E+++ VSW ++I GL A++ F
Sbjct: 244 ALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFS-------LM 296
Query: 329 XXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIE---HYG-CMVDLL 384
+ P VL AC+ G +D G R EY + I+ H G +VD+
Sbjct: 297 QTSSGIKPDGHILTSVLSACASLGAVDHG-----RWVHEYILTAGIKWDTHIGTAIVDMY 351
Query: 385 SRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGH 421
++ G ++ A E I N N W LLG IHGH
Sbjct: 352 AKCGYIETALE-IFNGIRSKNVFTWNALLGGLAIHGH 387
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 161/486 (33%), Positives = 254/486 (52%), Gaps = 41/486 (8%)
Query: 41 PLPHVLTKCISLLQYCASSKHKL-KQIHAFSIRHG----VPLHNPDMGKHLIFTIVSLSA 95
V+T C C + KL +QIH I+ G + + N M ++ S
Sbjct: 278 SFTSVITTC------CHETDLKLARQIHGLCIKRGYESLLEVGNILMSRY------SKCG 325
Query: 96 PMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLK 155
+ VF + NV +W TMI S + A+ + M V P+ T+ L+
Sbjct: 326 VLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLIN 380
Query: 156 AVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---- 211
AV + ++EG +H + IK GF S V NS + +YA E A K FE +T R
Sbjct: 381 AVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIIS 440
Query: 212 -------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACA--ELGALELGRRVHVY 262
FA NG +EAL +F +A + P+ +T S+L+A A E +++ G+R H +
Sbjct: 441 WNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAH 499
Query: 263 LLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXX 322
LLK GL V +ALLD+YAK G+I E+++VF EM ++N WT++I + +G
Sbjct: 500 LLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETV 559
Query: 323 XXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVD 382
+ +AP +TF+ VL AC+ GM+D+G++ F M E Y + P EHY CMVD
Sbjct: 560 MNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVD 619
Query: 383 LLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGD 442
+L RAG +K+A E + +P P + +++LG+C +HG++ +G ++++P+ SG
Sbjct: 620 MLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGS 679
Query: 443 YVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTM-----GDRSHP 497
YV + N+YA + W IRK+M + V K G+S +++G+ TM GD+SHP
Sbjct: 680 YVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHP 739
Query: 498 QSQDVY 503
+S ++Y
Sbjct: 740 KSDEIY 745
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 154/332 (46%), Gaps = 37/332 (11%)
Query: 46 LTKCISLLQYCASSKHKLKQIHAFSIRHG----VPLHNPDMGKHLIFTIVSLSAPMSYAH 101
+T C++L + C + QIH FS G V + N MG + + A
Sbjct: 79 VTLCLAL-KACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMY------RKAGRFDNAL 131
Query: 102 LVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSL 161
+F + +P+V +WNT++ G+ D + AL+F +M + V D TY L S
Sbjct: 132 CIFENLVDPDVVSWNTILSGF---DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSE 188
Query: 162 NVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMT--DRFALNGRPN 219
G L S +K G ES + V NS + +Y+ G A +VF+ M+ D + N +
Sbjct: 189 GFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLS 248
Query: 220 ----------EALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLR 269
EA+ +FR+M GVE D + S+++ C L+L R++H +K G
Sbjct: 249 GLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYE 308
Query: 270 ENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVG---LAVNGFGXXXXXXX 326
L V N L+ Y+KCG + + VF +M ERNVVSWTT+I AV+ F
Sbjct: 309 SLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDDAVSIF-------- 360
Query: 327 XXXXXQKLAPGEITFVGVLYACSHCGMLDEGF 358
+ P E+TFVG++ A + EG
Sbjct: 361 LNMRFDGVYPNEVTFVGLINAVKCNEQIKEGL 392
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 256 bits (653), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 156/440 (35%), Positives = 242/440 (55%), Gaps = 28/440 (6%)
Query: 51 SLLQYCASSKHKLKQI-HAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYA---HLVFTM 106
SLL+ C S L+ I H + H +P + + +V L A YA H VF
Sbjct: 97 SLLETCYS----LRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDR 152
Query: 107 I--RNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVR 164
+ R+ + F WN++I GYAE + A+ Y QM V+PD T+P +LKA +V+
Sbjct: 153 MSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQ 212
Query: 165 EGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE-----------SMTDRFA 213
GEA+H +K GF V+V N+L+ +YA CGD A VF+ SM +
Sbjct: 213 IGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYL 272
Query: 214 LNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
+G +EAL +FR M NG+EPD + S+L A + + + GR++H ++++ G+ L
Sbjct: 273 HHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELS 329
Query: 274 VVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQK 333
V NAL+ LY+K G + +A +F +M ER+ VSW +I + N G +
Sbjct: 330 VANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNGLKYFEQMHRANAK- 388
Query: 334 LAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQA 393
P ITFV VL C++ GM+++G F M +EYGI P++EHY CMV+L RAG++++A
Sbjct: 389 --PDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEA 446
Query: 394 YEYI-QNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYAS 452
Y I Q M ++ +W LL AC +HG+ +GE+A L +LEP + ++ LL +Y+
Sbjct: 447 YSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSK 506
Query: 453 ERRWTDVQTIRKSMLQDGVK 472
+R DV+ +R+ M+ G++
Sbjct: 507 AKRAEDVERVRQMMVDRGLE 526
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 145/295 (49%), Gaps = 26/295 (8%)
Query: 137 QMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACG 196
Q +S EP+ + LL+ + G +H + + + + + L+ +YA+CG
Sbjct: 84 QKGISLTEPEI--FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCG 141
Query: 197 DTESAHKVFESMTDR----FALN---------GRPNEALTLFREMSANGVEPDGFTVVSL 243
E AH+VF+ M+ R FA N G+ +A+ L+ +M+ +GV+PD FT +
Sbjct: 142 YAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRV 201
Query: 244 LSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNV 303
L AC +G++++G +H L+K G +++V+NAL+ +YAKCG I +A+ VF + ++
Sbjct: 202 LKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDY 261
Query: 304 VSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVL---YACSHCGMLDEGFDY 360
VSW +++ G +G + P ++ VL + H L G+
Sbjct: 262 VSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQL-HGWVI 320
Query: 361 FRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGA 415
R M+ E +A ++ L S+ G + QA +I + ++ + V W ++ A
Sbjct: 321 RRGMEWELSVA------NALIVLYSKRGQLGQAC-FIFDQMLERDTVSWNAIISA 368
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 133/363 (36%), Positives = 206/363 (56%), Gaps = 13/363 (3%)
Query: 146 DTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVF 205
D + +++ + + R G H + +K GF S V++ +SL+ +Y G+ E+A+KVF
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 206 ESMTDR-----------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALE 254
E M +R FA R + L L+ +M + +P+ +T +LLSAC GAL
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 255 LGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLA 314
GR VH L GL+ LH+ N+L+ +Y KCG +++A ++F + ++VVSW ++I G A
Sbjct: 239 QGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYA 298
Query: 315 VNGFGXXXXXXXXXXXXQK-LAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPR 373
+G + P IT++GVL +C H G++ EG +F M E +G+ P
Sbjct: 299 QHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAE-HGLKPE 357
Query: 374 IEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLL 433
+ HY C+VDLL R GL+++A E I+NMP++PN+VIW +LL +C +HG + G A L
Sbjct: 358 LNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERL 417
Query: 434 KLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGD 493
LEP + +V L+NLYAS W + T+RK M G+K PG S +E+ N V+ F D
Sbjct: 418 MLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAED 477
Query: 494 RSH 496
S+
Sbjct: 478 GSN 480
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 135/265 (50%), Gaps = 15/265 (5%)
Query: 66 IHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAES 125
H +++ G + + +G L+ + S + A+ VF + NV +W MI G+A+
Sbjct: 142 FHCLALKGGF-ISDVYLGSSLV-VLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQE 199
Query: 126 QDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVR 185
L Y +M S +P+ +T+ LL A + S + +G ++H T+ G +S + +
Sbjct: 200 WRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHIS 259
Query: 186 NSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFR-EMSANGV 233
NSL+ +Y CGD + A ++F+ +++ +A +G +A+ LF M +G
Sbjct: 260 NSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGT 319
Query: 234 EPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQ 293
+PD T + +LS+C G ++ GR+ + + GL+ L+ + L+DL + G ++EA +
Sbjct: 320 KPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALE 379
Query: 294 VFGEMEER-NVVSWTTLIVGLAVNG 317
+ M + N V W +L+ V+G
Sbjct: 380 LIENMPMKPNSVIWGSLLFSCRVHG 404
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 251 bits (642), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 136/428 (31%), Positives = 232/428 (54%), Gaps = 13/428 (3%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
KQ+H ++++ G+ L + +G L FT+ S + ++ +F I + W +MI G+
Sbjct: 470 KQVHGYTLKSGLVL-DLTVGSSL-FTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFN 527
Query: 124 ESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVF 183
E + A+ + +M PD T +L S ++ G+ +H T++ G + +
Sbjct: 528 EYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMD 587
Query: 184 VRNSLLHIYAACGDTESAHKVFE-----------SMTDRFALNGRPNEALTLFREMSANG 232
+ ++L+++Y+ CG + A +V++ S+ ++ +G + LFR+M +G
Sbjct: 588 LGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSG 647
Query: 233 VEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQ 292
D F + S+L A A LG +VH Y+ K GL V ++LL +Y+K GSI +
Sbjct: 648 FTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCC 707
Query: 293 QVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCG 352
+ F ++ ++++WT LI A +G + P ++TFVGVL ACSH G
Sbjct: 708 KAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGG 767
Query: 353 MLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTL 412
+++E + + M ++YGI P HY CMVD L R+G +++A +I NM ++P+A++W TL
Sbjct: 768 LVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTL 827
Query: 413 LGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVK 472
L AC IHG + LG++A ++LEP +G Y+ LSN+ A W +V+ RK M GV+
Sbjct: 828 LAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQ 887
Query: 473 KTPGYSLV 480
K PG+S V
Sbjct: 888 KEPGWSSV 895
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 166/344 (48%), Gaps = 23/344 (6%)
Query: 97 MSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKA 156
M+ A VF+ I NP+V +W M+ GY +S D AL +++M S VE + T ++ A
Sbjct: 301 MAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISA 360
Query: 157 VSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTD------ 210
+ V E +H+ K+GF V +L+ +Y+ GD + + +VFE + D
Sbjct: 361 CGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNI 420
Query: 211 ------RFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLL 264
F+ + +P +A+ LF M G+ D F+V SLLS L L LG++VH Y L
Sbjct: 421 VNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTL 477
Query: 265 KAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXX 324
K+GL +L V ++L LY+KCGS+ E+ ++F + ++ W ++I G G+
Sbjct: 478 KSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIG 537
Query: 325 XXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFD---YFRRMKEEYGIAPRIEHYGCMV 381
+P E T VL CS L G + Y R GI ++ +V
Sbjct: 538 LFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRA----GIDKGMDLGSALV 593
Query: 382 DLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLG 425
++ S+ G +K A + +P + + V +L+ + HG + G
Sbjct: 594 NMYSKCGSLKLARQVYDRLP-ELDPVSCSSLISGYSQHGLIQDG 636
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 117/232 (50%), Gaps = 12/232 (5%)
Query: 92 SLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYP 151
S S M+ A +F I P+V + N MI GY + + + +L F+ +M E + +Y
Sbjct: 95 SNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYG 154
Query: 152 FLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVF-ESMTD 210
++ A S E + TIK G+ V ++L+ +++ E A+KVF +S++
Sbjct: 155 SVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSA 214
Query: 211 RF---------AL-NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVH 260
AL N LF EM +PD +T S+L+ACA L L G+ V
Sbjct: 215 NVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQ 274
Query: 261 VYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVG 312
++K G E++ V A++DLYAKCG + EA +VF + +VVSWT ++ G
Sbjct: 275 ARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSG 325
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 103/250 (41%), Gaps = 20/250 (8%)
Query: 182 VFVRNSLLHIYAACGDTESAHKVFES-----------MTDRFALNGRPNEALTLFREMSA 230
VF+ SLL Y+ G A K+F++ M + + E+L F +M
Sbjct: 84 VFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHF 143
Query: 231 NGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIRE 290
G E + + S++SAC+ L A V + +K G V +AL+D+++K +
Sbjct: 144 LGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFED 203
Query: 291 AQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSH 350
A +VF + NV W T+I G N P T+ VL AC+
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACAS 263
Query: 351 CGMLDEGFDYFRRMKEEYGIAPRIEH-YGC--MVDLLSRAGLVKQAYEYIQNMPVQPNAV 407
L F ++ + I E + C +VDL ++ G + +A E +P P+ V
Sbjct: 264 LEKLR-----FGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIP-NPSVV 317
Query: 408 IWRTLLGACT 417
W +L T
Sbjct: 318 SWTVMLSGYT 327
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/372 (35%), Positives = 208/372 (55%), Gaps = 13/372 (3%)
Query: 143 VEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAH 202
VEP+T Y LL+ + +G+ +H+ GF +++ LL +YA GD ++A
Sbjct: 106 VEPET--YAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAG 163
Query: 203 KVFESMTDR-----------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELG 251
+F S+ R + G E L ++ +M N + PD +T S+ AC+ L
Sbjct: 164 ILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALD 223
Query: 252 ALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIV 311
LE G+R H ++K ++ N+ V +AL+D+Y KC S + +VF ++ RNV++WT+LI
Sbjct: 224 RLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLIS 283
Query: 312 GLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIA 371
G +G + P +TF+ VL AC+H G++D+G+++F MK +YGI
Sbjct: 284 GYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIE 343
Query: 372 PRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSH 431
P +HY MVD L RAG +++AYE++ P + + +W +LLGAC IHG++ L E+A +
Sbjct: 344 PEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATK 403
Query: 432 LLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTM 491
L+L+P + G+YV+ +N YAS +R+ M GVKK PGYS +EL V+ F
Sbjct: 404 FLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMK 463
Query: 492 GDRSHPQSQDVY 503
D SH S+ +Y
Sbjct: 464 DDTSHRLSEKIY 475
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 119/255 (46%), Gaps = 18/255 (7%)
Query: 52 LLQYCASSKH--KLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRN 109
LLQ C K K K+IHA G L+ K LI + +LS + A ++F ++
Sbjct: 114 LLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLI--LYALSGDLQTAGILFRSLKI 171
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
++ WN MI GY + + L Y M + + PD +T+ + +A S + G+
Sbjct: 172 RDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRA 231
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRP 218
H+V IK +S + V ++L+ +Y C H+VF+ ++ R + +G+
Sbjct: 232 HAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKV 291
Query: 219 NEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKA--GLRENLHVVN 276
+E L F +M G P+ T + +L+AC G ++ G H Y +K G+
Sbjct: 292 SEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE-HFYSMKRDYGIEPEGQHYA 350
Query: 277 ALLDLYAKCGSIREA 291
A++D + G ++EA
Sbjct: 351 AMVDTLGRAGRLQEA 365
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 85/212 (40%), Gaps = 5/212 (2%)
Query: 212 FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLREN 271
+ GR EA+ L S VEP+ + V LL C + G+R+H + G N
Sbjct: 86 LCVTGRLKEAVGLLWS-SGLQVEPETYAV--LLQECKQRKEYTKGKRIHAQMFVVGFALN 142
Query: 272 LHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXX 331
++ LL LYA G ++ A +F ++ R+++ W +I G G
Sbjct: 143 EYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQ 202
Query: 332 QKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVK 391
++ P + TF V ACS L+ G M + I I +VD+ +
Sbjct: 203 NRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKR-CIKSNIIVDSALVDMYFKCSSFS 261
Query: 392 QAYEYIQNMPVQPNAVIWRTLLGACTIHGHLS 423
+ + + N + W +L+ HG +S
Sbjct: 262 DGHRVFDQLSTR-NVITWTSLISGYGYHGKVS 292
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 138/421 (32%), Positives = 222/421 (52%), Gaps = 21/421 (4%)
Query: 95 APMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLL 154
M A F + + + +W +I GY + A + QM D Y ++
Sbjct: 127 GKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHV---KDVVIYNAMM 183
Query: 155 KAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR--- 211
KS ++ L V +++H Y D ++A K+F++M +R
Sbjct: 184 DGFVKSGDMTSARRLFDEMT----HKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLV 239
Query: 212 --------FALNGRPNEALTLFREMSAN-GVEPDGFTVVSLLSACAELGALELGRRVHVY 262
+ N +P E + LF+EM A ++PD T++S+L A ++ GAL LG H +
Sbjct: 240 SWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCF 299
Query: 263 LLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXX 322
+ + L + + V A+LD+Y+KCG I +A+++F EM E+ V SW +I G A+NG
Sbjct: 300 VQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAA 359
Query: 323 XXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVD 382
++ P EIT + V+ AC+H G+++EG +F M+E G+ +IEHYGCMVD
Sbjct: 360 LDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMRE-MGLNAKIEHYGCMVD 417
Query: 383 LLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGD 442
LL RAG +K+A + I NMP +PN +I + L AC + + E ++LEP++ G+
Sbjct: 418 LLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGN 477
Query: 443 YVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDV 502
YVLL NLYA+++RW D ++ M ++ KK G SL+E+ V EF GD +HP + +
Sbjct: 478 YVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSI 537
Query: 503 Y 503
+
Sbjct: 538 H 538
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 147/349 (42%), Gaps = 24/349 (6%)
Query: 88 FTIVSLSA-PMSYAHLVFTMI-RNPNVFTWNTMIRGYAESQDPKPALHFYRQMTM-SCVE 144
F ++S SA + YA +F + + F N+MI+ Y E++ + YR + +C
Sbjct: 16 FLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFA 75
Query: 145 PDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKV 204
PD T+ L K+ S S+ V +G LHS + GF + ++V ++ +YA G A
Sbjct: 76 PDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNA 135
Query: 205 FESMTDRFALN-----------GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGAL 253
F+ M R ++ G + A LF +M D +++ + G +
Sbjct: 136 FDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPH---VKDVVIYNAMMDGFVKSGDM 192
Query: 254 ELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGL 313
RR L + + ++ Y I A+++F M ERN+VSW T+I G
Sbjct: 193 TSARR----LFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGY 248
Query: 314 AVNGFGXX-XXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAP 372
N L P ++T + VL A S G L G ++ + +
Sbjct: 249 CQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLG-EWCHCFVQRKKLDK 307
Query: 373 RIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGH 421
+++ ++D+ S+ G +++A MP + W ++ ++G+
Sbjct: 308 KVKVCTAILDMYSKCGEIEKAKRIFDEMP-EKQVASWNAMIHGYALNGN 355
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 13/152 (8%)
Query: 174 IKNGFESLVFVRNSLLHIYAACGDTESAHKVFE------------SMTDRFALNGRPNEA 221
+++ E+ V + L I A+ A K+F+ SM + + ++
Sbjct: 2 LRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDS 61
Query: 222 LTLFREMSANG-VEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLD 280
L+R++ PD FT +L +C+ + G ++H + + G +++V ++D
Sbjct: 62 FALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVD 121
Query: 281 LYAKCGSIREAQQVFGEMEERNVVSWTTLIVG 312
+YAK G + A+ F EM R+ VSWT LI G
Sbjct: 122 MYAKFGKMGCARNAFDEMPHRSEVSWTALISG 153
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 248 bits (634), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 128/388 (32%), Positives = 220/388 (56%), Gaps = 13/388 (3%)
Query: 103 VFTMIRNPNVFTWNTMIRGYAESQDPKPALH-FYRQMTMSCVEPDTHTYPFLLKAVSKSL 161
VF + N+F+WN +I ++ S ++ F R SCV PD T P +L+A S S
Sbjct: 89 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASR 148
Query: 162 NVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------- 211
+ G+ +H + +K GF S +FV ++L+ +Y G A K+F+ M R
Sbjct: 149 EAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFG 208
Query: 212 -FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRE 270
+ G L +FREM +G D +VSLL AC +LGAL+ G+ VH + ++
Sbjct: 209 GYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCL 268
Query: 271 NLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXX 330
L++ NA+ D+Y KC + A VF M R+V+SW++LI+G ++G
Sbjct: 269 GLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEML 328
Query: 331 XQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLV 390
+ + P +TF+GVL AC+H G++++ + YFR M +EY I P ++HY + D +SRAGL+
Sbjct: 329 KEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLM-QEYNIVPELKHYASVADCMSRAGLL 387
Query: 391 KQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLY 450
++A +++++MPV+P+ + +L C ++G++ +GE L++L+P+ + YV L+ LY
Sbjct: 388 EEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLY 447
Query: 451 ASERRWTDVQTIRKSMLQDGVKKTPGYS 478
++ R+ + +++R+ M + + K PG S
Sbjct: 448 SAAGRFDEAESLRQWMKEKQISKVPGCS 475
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 142/435 (32%), Positives = 223/435 (51%), Gaps = 21/435 (4%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
K +H + R G N + K I + + S + YA VF + N TW+ MI GY
Sbjct: 225 KAVHGYCTRMG--FSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYV 282
Query: 124 ESQDPKPALHFYRQM----TMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFE 179
E++ K A + QM ++ V P +L ++ ++ G +H +K GF
Sbjct: 283 ENEMIKEAGEVFFQMLVNDNVAMVTP--VAIGLILMGCARFGDLSGGRCVHCYAVKAGFI 340
Query: 180 SLVFVRNSLLHIYAACGDTESAHKVFE-----------SMTDRFALNGRPNEALTLFREM 228
+ V+N+++ YA G A + F S+ +N RP E+ LF EM
Sbjct: 341 LDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEM 400
Query: 229 SANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSI 288
+G+ PD T++ +L+AC+ L AL G H Y + G N + NAL+D+Y KCG +
Sbjct: 401 RTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKL 460
Query: 289 REAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYAC 348
A++VF M +R++VSW T++ G ++G G + P E+T + +L AC
Sbjct: 461 DVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSAC 520
Query: 349 SHCGMLDEGFDYFRRM-KEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAV 407
SH G++DEG F M + ++ + PRI+HY CM DLL+RAG + +AY+++ MP +P+
Sbjct: 521 SHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIR 580
Query: 408 IWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSML 467
+ TLL AC + + LG + L + + VLLSN Y++ RW D IR
Sbjct: 581 VLGTLLSACWTYKNAELGNEVSKKMQSL-GETTESLVLLSNTYSAAERWEDAARIRMIQK 639
Query: 468 QDGVKKTPGYSLVEL 482
+ G+ KTPGYS V++
Sbjct: 640 KRGLLKTPGYSWVDV 654
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 144/283 (50%), Gaps = 17/283 (6%)
Query: 50 ISLLQYCASSKHKL--KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMI 107
+SLL+ C S++ + + IH ++ + L + + +L S + + A VF I
Sbjct: 3 LSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCN-EVELARHVFDEI 61
Query: 108 RNP--NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVRE 165
+P N W+ MIR YA + + AL Y +M S V P +TYPF+LKA + + +
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 166 GEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FAL 214
G+ +HS + F + ++V +L+ YA CG+ E A KVF+ M R F+L
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSL 181
Query: 215 NGRPNEALTLFREM-SANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
+ + + LF +M +G+ P+ T+V + A GAL G+ VH Y + G +L
Sbjct: 182 HCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLV 241
Query: 274 VVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVN 316
V +LD+YAK I A++VF ++N V+W+ +I G N
Sbjct: 242 VKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVEN 284
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 132/283 (46%), Gaps = 27/283 (9%)
Query: 153 LLKAVSKSLNVREGEALHSVTIKNGF---ESLVFVRNSLLHIYAACGDTESAHKVFES-- 207
LL+ +S N+ G+ +H +K S V V +L +YA+C + E A VF+
Sbjct: 5 LLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLV--NLTRLYASCNEVELARHVFDEIP 62
Query: 208 -----------MTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELG 256
M +A N +AL L+ +M +GV P +T +L ACA L A++ G
Sbjct: 63 HPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDG 122
Query: 257 RRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVN 316
+ +H ++ + +++V AL+D YAKCG + A +VF EM +R++V+W +I G +++
Sbjct: 123 KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLH 182
Query: 317 -GFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEG---FDYFRRMKEEYGIAP 372
L+P T VG+ A G L EG Y RM G +
Sbjct: 183 CCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRM----GFSN 238
Query: 373 RIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGA 415
+ ++D+ +++ + A + ++ + N V W ++G
Sbjct: 239 DLVVKTGILDVYAKSKCIIYA-RRVFDLDFKKNEVTWSAMIGG 280
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 163/501 (32%), Positives = 250/501 (49%), Gaps = 55/501 (10%)
Query: 53 LQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMS---YAHLVFTMIRN 109
L +S ++KQIH I G +G +L ++V + A VF + +
Sbjct: 139 LMKASSFLSEVKQIHCHIIVSGCL----SLGNYLWNSLVKFYMELGNFGVAEKVFARMPH 194
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P+V ++N MI GYA+ AL Y +M +EPD +T LL ++R G+ +
Sbjct: 195 PDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGV 254
Query: 170 HSVTIKNG--FESLVFVRNSLLHIYAAC-------------------------------G 196
H + G + S + + N+LL +Y C G
Sbjct: 255 HGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLG 314
Query: 197 DTESAHKVFESMTDR---------FALNGRPNEALT---LFREMS-ANGVEPDGFTVVSL 243
D E+A VF+ M R F + + + T LF EM+ V+PD T+VSL
Sbjct: 315 DMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSL 374
Query: 244 LSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNV 303
+S A G L GR VH +++ L+ + + +AL+D+Y KCG I A VF E++V
Sbjct: 375 ISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDV 434
Query: 304 VSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRR 363
WT++I GLA +G G + + P +T + VL ACSH G+++EG F
Sbjct: 435 ALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNH 494
Query: 364 MKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQ-NMPVQPNAVIWRTLLGACTIHGHL 422
MK+++G P EHYG +VDLL RAG V++A + +Q MP++P+ +W ++L AC +
Sbjct: 495 MKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDI 554
Query: 423 SLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVEL 482
E+A + LLKLEP+ G YVLLSN+YA+ RW R++M GVKKT GYS V
Sbjct: 555 ETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVG 614
Query: 483 GNRVYEFTMGDR-SHPQSQDV 502
++ F ++ +HP+ ++
Sbjct: 615 VEGLHRFVAAEKQNHPRWTEI 635
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 195/428 (45%), Gaps = 68/428 (15%)
Query: 48 KCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVF-TM 106
+ + LL+ C +S+++ KQ+ A +R + M + + F+ ++ + A L+F
Sbjct: 36 QSLVLLENC-NSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNF 94
Query: 107 IRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREG 166
NPNVF +NTMI + S++ Y M V PD T+ +L+KA S V++
Sbjct: 95 TPNPNVFVYNTMISAVSSSKNE--CFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVKQ- 151
Query: 167 EALHSVTIKNGFESL-VFVRNSLLHIYAACGDTESAHKVFESMTD-----------RFAL 214
+H I +G SL ++ NSL+ Y G+ A KVF M +A
Sbjct: 152 --IHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAK 209
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAG--LRENL 272
G EAL L+ +M ++G+EPD +TV+SLL C L + LG+ VH ++ + G NL
Sbjct: 210 QGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNL 269
Query: 273 HVVNALLDLYAKC-------------------------------GSIREAQQVFGEMEER 301
+ NALLD+Y KC G + AQ VF +M +R
Sbjct: 270 ILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKR 329
Query: 302 NVVSWTTLIVGLAVNGFGXXXXXXX--XXXXXQKLAPGEITFVGVLYACSHCGMLDEGFD 359
++VSW +L+ G + G +K+ P +T V ++ ++ G L G
Sbjct: 330 DLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHG-- 387
Query: 360 YFRRMKEEYGIAPRIEHYG------CMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLL 413
+ +G+ R++ G ++D+ + G++++A+ + + + +W +++
Sbjct: 388 -----RWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKT-ATEKDVALWTSMI 441
Query: 414 GACTIHGH 421
HG+
Sbjct: 442 TGLAFHGN 449
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 118/269 (43%), Gaps = 41/269 (15%)
Query: 213 ALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAG-LREN 271
A++ NE L+ M + V PD T + L+ A + L + +++H +++ +G L
Sbjct: 109 AVSSSKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEV---KQIHCHIIVSGCLSLG 165
Query: 272 LHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXX 331
++ N+L+ Y + G+ A++VF M +V S+ +IVG A GF
Sbjct: 166 NYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVS 225
Query: 332 QKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYG-----------CM 380
+ P E T + +L C H + G G+ IE G +
Sbjct: 226 DGIEPDEYTVLSLLVCCGHLSDIRLG----------KGVHGWIERRGPVYSSNLILSNAL 275
Query: 381 VDLLSR---AGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEI-ARSHLLKLE 436
+D+ + +GL K+A++ ++ ++ W T+ + G + LG++ A +
Sbjct: 276 LDMYFKCKESGLAKRAFDAMKKKDMRS----WNTM-----VVGFVRLGDMEAAQAVFDQM 326
Query: 437 PKHSGDYVLLSN-LYASERRWTDVQTIRK 464
PK D V ++ L+ ++ D +T+R+
Sbjct: 327 PKR--DLVSWNSLLFGYSKKGCDQRTVRE 353
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/453 (30%), Positives = 235/453 (51%), Gaps = 15/453 (3%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
K +HA + P+ + + + T+ S A+LVF + ++ W ++I G
Sbjct: 393 KSVHAELFKR--PIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLC 450
Query: 124 ESQDPKPALHFYRQMTMS--CVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESL 181
++ K AL + M ++PD+ + A + +R G +H IK G
Sbjct: 451 KNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLN 510
Query: 182 VFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMSA 230
VFV +SL+ +Y+ CG E A KVF SM+ ++ N P ++ LF M +
Sbjct: 511 VFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLS 570
Query: 231 NGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIRE 290
G+ PD ++ S+L A + +L G+ +H Y L+ G+ + H+ NAL+D+Y KCG +
Sbjct: 571 QGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKY 630
Query: 291 AQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSH 350
A+ +F +M+ +++++W +I G +G +P ++TF+ ++ AC+H
Sbjct: 631 AENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNH 690
Query: 351 CGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWR 410
G ++EG + F MK++YGI P +EHY MVDLL RAGL+++AY +I+ MP++ ++ IW
Sbjct: 691 SGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWL 750
Query: 411 TLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDG 470
LL A H ++ LG ++ LL++EP+ YV L NLY + + M + G
Sbjct: 751 CLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKG 810
Query: 471 VKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVY 503
+ K PG S +E+ +R F G S P +++
Sbjct: 811 LHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIF 843
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 163/373 (43%), Gaps = 36/373 (9%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSY---AHLVFTMIRN-PNVFTWNTMI 119
KQIH F +R+ + D L ++ + A VF I + NV WN MI
Sbjct: 190 KQIHGFMLRNSL-----DTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMI 244
Query: 120 RGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFE 179
G+ S + +L Y + V+ + ++ L A S+S N G +H +K G
Sbjct: 245 VGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLH 304
Query: 180 SLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREM 228
+ +V SLL +Y+ CG A VF + D+ +A N AL LF M
Sbjct: 305 NDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFM 364
Query: 229 SANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSI 288
V PD FT+ +++S C+ LG G+ VH L K ++ + +ALL LY+KCG
Sbjct: 365 RQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCD 424
Query: 289 REAQQVFGEMEERNVVSWTTLIVGLAVNG--------FGXXXXXXXXXXXXQKLAPGEIT 340
+A VF MEE+++V+W +LI GL NG FG L P
Sbjct: 425 PDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFG------DMKDDDDSLKPDSDI 478
Query: 341 FVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNM 400
V AC+ L G M + G+ + ++DL S+ GL + A + +M
Sbjct: 479 MTSVTNACAGLEALRFGLQVHGSMIKT-GLVLNVFVGSSLIDLYSKCGLPEMALKVFTSM 537
Query: 401 PVQPNAVIWRTLL 413
+ N V W +++
Sbjct: 538 STE-NMVAWNSMI 549
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 149/330 (45%), Gaps = 24/330 (7%)
Query: 111 NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVR--EGEA 168
+V WN+MI GY + + K + +R+M + V PD + ++ + K N R EG+
Sbjct: 132 DVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQ 191
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR------------FALNG 216
+H ++N ++ F++ +L+ +Y G + A +VF + D+ F +G
Sbjct: 192 IHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSG 251
Query: 217 RPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVN 276
+L L+ N V+ + L AC++ GR++H ++K GL + +V
Sbjct: 252 ICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCT 311
Query: 277 ALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAP 336
+LL +Y+KCG + EA+ VF + ++ + W ++ A N +G + + P
Sbjct: 312 SLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLP 371
Query: 337 GEITFVGVLYACSHCGMLDEG----FDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQ 392
T V+ CS G+ + G + F+R + IE ++ L S+ G
Sbjct: 372 DSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQS---TSTIES--ALLTLYSKCGCDPD 426
Query: 393 AYEYIQNMPVQPNAVIWRTLLGACTIHGHL 422
AY ++M + + V W +L+ +G
Sbjct: 427 AYLVFKSME-EKDMVAWGSLISGLCKNGKF 455
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 145/325 (44%), Gaps = 30/325 (9%)
Query: 116 NTMIRGYAESQDPKPALHFYRQMTMSC-VEPDTHTYPFLLKAVSKSLNVREGEALHSVTI 174
N+ IR + + ALH Y + S T+P LLKA S N+ G+ +H +
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVV 87
Query: 175 KNGFESLVFVRNSLLHIYAACGDTESAHKVFE------------------SMTDRFALNG 216
G+ F+ SL+++Y CG + A +VF+ SM D +
Sbjct: 88 VLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFR 147
Query: 217 RPNEALTLFREMSANGVEPDGFTVVSLLSACAELGAL--ELGRRVHVYLLKAGLRENLHV 274
R E + FR M GV PD F++ ++S + G E G+++H ++L+ L + +
Sbjct: 148 RFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFL 207
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEER-NVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQK 333
AL+D+Y K G +A +VF E+E++ NVV W +IVG +G
Sbjct: 208 KTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNS 267
Query: 334 LAPGEITFVGVLYACSHCGMLDEGFDYFRRMK-EEYGIAPRIEHYGC--MVDLLSRAGLV 390
+ +F G L ACS E + R++ + + + Y C ++ + S+ G+V
Sbjct: 268 VKLVSTSFTGALGACSQ----SENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMV 323
Query: 391 KQAYEYIQNMPVQPNAVIWRTLLGA 415
+A E + + V IW ++ A
Sbjct: 324 GEA-ETVFSCVVDKRLEIWNAMVAA 347
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/413 (32%), Positives = 217/413 (52%), Gaps = 12/413 (2%)
Query: 95 APMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLL 154
M A ++F + +V W TM+ G+A++ A+ FYR+M D LL
Sbjct: 165 GKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLL 224
Query: 155 KAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE-------- 206
+A + + G ++H + G V V SL+ +YA G E A +VF
Sbjct: 225 QASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAV 284
Query: 207 ---SMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYL 263
S+ FA NG N+A EM + G +PD T+V +L AC+++G+L+ GR VH Y+
Sbjct: 285 SWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYI 344
Query: 264 LKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXX 323
LK + + + AL+D+Y+KCG++ ++++F + +++V W T+I ++G G
Sbjct: 345 LKRHVLDRV-TATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVV 403
Query: 324 XXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDL 383
+ P TF +L A SH G++++G +F M +Y I P +HY C++DL
Sbjct: 404 SLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDL 463
Query: 384 LSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDY 443
L+RAG V++A + I + + IW LL C H +LS+G+IA + +L+L P G
Sbjct: 464 LARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQ 523
Query: 444 VLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSH 496
L+SN +A+ +W +V +RK M ++K PGYS +E+ + F M D SH
Sbjct: 524 TLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSH 576
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/422 (31%), Positives = 201/422 (47%), Gaps = 31/422 (7%)
Query: 48 KCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMI 107
K I LQ + K + QIHAF I G L+ + + LI + + +SYA VF +
Sbjct: 18 KRIKFLQSISKLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRI-GEISYARKVFDEL 76
Query: 108 RNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGE 167
V +N+MI Y+ ++P L Y QM ++PD+ T+ +KA L + +GE
Sbjct: 77 PQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGE 136
Query: 168 ALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNG 216
A+ + G+++ VFV +S+L++Y CG + A +F M R FA G
Sbjct: 137 AVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAG 196
Query: 217 RPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVN 276
+ +A+ +REM G D ++ LL A +LG ++GR VH YL + GL N+ V
Sbjct: 197 KSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVET 256
Query: 277 ALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAP 336
+L+D+YAK G I A +VF M + VSW +LI G A NG P
Sbjct: 257 SLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQP 316
Query: 337 GEITFVGVLYACSHCGMLDEGFDYFRRMKEEY----GIAPRIEHYGCMVDLLSRAGLVKQ 392
+T VGVL ACS G L G R+ Y + R+ M D+ S+ G +
Sbjct: 317 DLVTLVGVLVACSQVGSLKTG-----RLVHCYILKRHVLDRVTATALM-DMYSKCGALSS 370
Query: 393 AYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKL-----EPKHSGDYVLLS 447
+ E +++ + + V W T++ IHG+ G+ S LK+ EP H+ LLS
Sbjct: 371 SREIFEHVG-RKDLVCWNTMISCYGIHGN---GQEVVSLFLKMTESNIEPDHATFASLLS 426
Query: 448 NL 449
L
Sbjct: 427 AL 428
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 162/469 (34%), Positives = 252/469 (53%), Gaps = 45/469 (9%)
Query: 50 ISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLI---FTIVSLSAPMSYAHL-VFT 105
+SLLQ + + + KQIHA + +G H+ + LI + S + AHL VF
Sbjct: 11 LSLLQQNSKTLIQAKQIHAQLVINGC--HDNSLFGKLIGHYCSKPSTESSSKLAHLLVFP 68
Query: 106 MIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTM--SCVEPDTHTYPFLL---KAVSKS 160
+P+ F +NT+++ P+ ++ + S + + T+ F+L + S
Sbjct: 69 RFGHPDKFLFNTLLK----CSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASS 124
Query: 161 LNVREGEALHSVTIKNGF--ESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFAL---- 214
+R G +H + K GF ES + + +LLH YA GD A KVF+ M +R ++
Sbjct: 125 SALRVGRIVHGMVKKLGFLYESEL-IGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNA 183
Query: 215 ------------NGRPNEALTLFREMS--ANGVEPDGFTVVSLLSACAELGALELGRRVH 260
N +A+ LFR S +GV P T+V +LSA ++ G LE+G VH
Sbjct: 184 MIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVH 243
Query: 261 VYLLKAGLRENLHVV--NALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGF 318
Y+ K G + V AL+D+Y+KCG + A VF M+ +NV +WT++ GLA+NG
Sbjct: 244 GYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGR 303
Query: 319 GXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYG 378
G + P EITF +L A H G+++EG + F+ MK +G+ P IEHYG
Sbjct: 304 GNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYG 363
Query: 379 CMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLE-- 436
C+VDLL +AG +++AY++I MP++P+A++ R+L AC+I+G +GE LL++E
Sbjct: 364 CIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIERE 423
Query: 437 -PKHSG----DYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLV 480
K SG DYV LSN+ A + +W +V+ +RK M + +K PGYS V
Sbjct: 424 DEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 132/417 (31%), Positives = 219/417 (52%), Gaps = 16/417 (3%)
Query: 103 VFTMIRNPNVFTWNTMIRGYAE-----SQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAV 157
+F+++ + NV T+N MI G+ + + A + M +EP T+ +LKA
Sbjct: 309 LFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKAC 368
Query: 158 SKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFES---------- 207
S + + G +H++ KN F+S F+ ++L+ +YA G TE + F S
Sbjct: 369 SAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWT 428
Query: 208 -MTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKA 266
M D N + A LFR++ ++ + P+ +TV ++SACA+ AL G ++ Y +K+
Sbjct: 429 SMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKS 488
Query: 267 GLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXX 326
G+ V + + +YAK G++ A QVF E++ +V +++ +I LA +G
Sbjct: 489 GIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIF 548
Query: 327 XXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSR 386
+ P + F+GVL AC H G++ +G YF+ MK +Y I P +H+ C+VDLL R
Sbjct: 549 ESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGR 608
Query: 387 AGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLL 446
G + A I + Q + V WR LL +C ++ +G+ L++LEP+ SG YVLL
Sbjct: 609 TGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLL 668
Query: 447 SNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVY 503
N+Y + + +R+ M GVKK P S + +GN+ + F + D SHP SQ +Y
Sbjct: 669 HNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIY 725
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 130/280 (46%), Gaps = 19/280 (6%)
Query: 97 MSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKA 156
+ +A +F + N+ ++N++I GY + + A+ + + + ++ D TY L
Sbjct: 98 LGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGF 157
Query: 157 VSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALN- 215
+ ++ GE LH + + NG VF+ N L+ +Y+ CG + A +F+ +R ++
Sbjct: 158 CGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSW 217
Query: 216 ----------GRPNEALTLFREMSANGVEPDGFTVVSLLSACA---ELGALELGRRVHVY 262
G E L L +M +G+ + + S+L AC G +E G +H Y
Sbjct: 218 NSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCY 277
Query: 263 LLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGL-----AVNG 317
K G+ ++ V ALLD+YAK GS++EA ++F M +NVV++ +I G +
Sbjct: 278 TAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDE 337
Query: 318 FGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEG 357
+ L P TF VL ACS L+ G
Sbjct: 338 ASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYG 377
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 162/380 (42%), Gaps = 39/380 (10%)
Query: 85 HLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVE 144
+++ + S + A +F + +WN++I GY + L+ +M +
Sbjct: 187 NVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLN 246
Query: 145 PDTHTYPFLLKAVSKSLN---VREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESA 201
T+ +LKA +LN + +G A+H T K G E + VR +LL +YA G + A
Sbjct: 247 LTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEA 306
Query: 202 HKVFESMTDRFAL----------------NGRPNEALTLFREMSANGVEPDGFTVVSLLS 245
K+F M + + + +EA LF +M G+EP T +L
Sbjct: 307 IKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLK 366
Query: 246 ACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVS 305
AC+ LE GR++H + K + + + +AL++LYA GS + Q F ++++ S
Sbjct: 367 ACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIAS 426
Query: 306 WTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMK 365
WT++I N + P E T ++ AC+ L G
Sbjct: 427 WTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSG-----EQI 481
Query: 366 EEYGIAPRIEHYGCM----VDLLSRAG---LVKQAYEYIQNMPVQPNAVIWRTLLGACTI 418
+ Y I I+ + + + + +++G L Q + +QN P+ + ++ +
Sbjct: 482 QGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQN----PDVATYSAMISSLAQ 537
Query: 419 HGH----LSLGEIARSHLLK 434
HG L++ E ++H +K
Sbjct: 538 HGSANEALNIFESMKTHGIK 557
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 139/312 (44%), Gaps = 34/312 (10%)
Query: 146 DTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVF 205
D+ Y L + +KS +V G+ H IK+ +++ N+LL++Y C + A ++F
Sbjct: 46 DSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLF 105
Query: 206 ESMTDR-----------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALE 254
+ M +R + G +A+ LF E ++ D FT L C E L+
Sbjct: 106 DRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLD 165
Query: 255 LGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLA 314
LG +H ++ GL + + ++N L+D+Y+KCG + +A +F +ER+ VSW +LI G
Sbjct: 166 LGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYV 225
Query: 315 VNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFD--------YFRRMKE 366
G L VL AC C L+EGF Y ++
Sbjct: 226 RVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKAC--CINLNEGFIEKGMAIHCYTAKLGM 283
Query: 367 EYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGE 426
E+ I R ++D+ ++ G +K+A + MP N V + + I G L + E
Sbjct: 284 EFDIVVRT----ALLDMYAKNGSLKEAIKLFSLMP-SKNVVTYNAM-----ISGFLQMDE 333
Query: 427 I---ARSHLLKL 435
I A S KL
Sbjct: 334 ITDEASSEAFKL 345
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 148/465 (31%), Positives = 238/465 (51%), Gaps = 53/465 (11%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAP-MSYAHLVFTMIRNPNVFTWNTMIRGY 122
K+IHA I+ G PD+ + I+ L +SYA VF + P + +N MI GY
Sbjct: 54 KKIHADIIKTGF---QPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 123 AESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKS-----LNVREGEALHSVTIKNG 177
+ K L ++M+ S + D +T +LKA + L +H+ IK
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 178 FESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-------------------------- 211
E + +L+ Y G ESA VFE+M D
Sbjct: 171 VELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFN 230
Query: 212 ----------------FALNGR-PNEALTLFREMSANGVEPDGFTVVSLLSACAELGALE 254
F+ +G ++ ++ M G P+ T S++ AC+ L + E
Sbjct: 231 TTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHE 290
Query: 255 LGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLA 314
+G++VH ++K+G+ ++ + ++LLD+YAKCG I +A++VF +M+E+NV SWT++I G
Sbjct: 291 VGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYG 350
Query: 315 VNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRI 374
NG ++ P +TF+G L ACSH G++D+G++ F M+ +Y + P++
Sbjct: 351 KNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKM 410
Query: 375 EHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLK 434
EHY C+VDL+ RAG + +A+E+ + MP +P++ IW LL +C +HG++ L IA S L K
Sbjct: 411 EHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFK 470
Query: 435 LEP-KHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYS 478
L K G Y+ LSN+YAS +W +V IR+ M + + KT G S
Sbjct: 471 LNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 120/291 (41%), Gaps = 60/291 (20%)
Query: 164 REGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFES-----------MTDRF 212
+ G+ +H+ IK GF+ + + LL ++ CG A +VF+ M +
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 213 ALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGAL-----ELGRRVHVYLLKAG 267
+G E L L + MS +G + DG+T+ +L A G+ L R VH ++K
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 268 LRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXX 327
+ + ++ AL+D Y K G + A+ VF M++ NVV T++I G GF
Sbjct: 171 VELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGF--------- 221
Query: 328 XXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRA 387
+++ + F K I Y MV+ SR+
Sbjct: 222 --------------------------VEDAEEIFNTTK-----VKDIVVYNAMVEGFSRS 250
Query: 388 GLVKQ----AYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLK 434
G + Y +Q PN + +++GAC++ +G+ + ++K
Sbjct: 251 GETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMK 301
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 104/250 (41%), Gaps = 29/250 (11%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
+Q+HA ++ GV H MG L+ + + ++ A VF ++ NVF+W +MI GY
Sbjct: 293 QQVHAQIMKSGVYTH-IKMGSSLL-DMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYG 350
Query: 124 ESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVF 183
++ +P+ AL + +M +EP+ T+ L A S HS + G+E
Sbjct: 351 KNGNPEEALELFTRMKEFRIEPNYVTFLGALSACS-----------HSGLVDKGYE---- 395
Query: 184 VRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSL 243
+ S+ Y+ E + + D G N+A R M PD +L
Sbjct: 396 IFESMQRDYSMKPKMEH----YACIVDLMGRAGDLNKAFEFARAMPE---RPDSDIWAAL 448
Query: 244 LSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNV 303
LS+C G +EL L K + AL ++YA ++ M+ R +
Sbjct: 449 LSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRI 508
Query: 304 V-----SWTT 308
SWT+
Sbjct: 509 SKTIGRSWTS 518
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 146/454 (32%), Positives = 243/454 (53%), Gaps = 21/454 (4%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSA---PMSYAHLVFTMIRNPNVFTWNTMIR 120
K +H F++R + +P+ + L +V L A +S V ++ + N+ WN++I
Sbjct: 323 KSVHGFAVRREL---DPNY-ESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLIS 378
Query: 121 GYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFES 180
YA AL +RQM ++PD T + A + V G+ +H I+ S
Sbjct: 379 LYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV-S 437
Query: 181 LVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMS 229
FV+NSL+ +Y+ G +SA VF + R F+ NG EA++LF M
Sbjct: 438 DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMY 497
Query: 230 ANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIR 289
+ +E + T ++++ AC+ +G+LE G+ VH L+ +GL++ L AL+D+YAKCG +
Sbjct: 498 HSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKD-LFTDTALIDMYAKCGDLN 556
Query: 290 EAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACS 349
A+ VF M R++VSW+++I ++G P E+ F+ VL AC
Sbjct: 557 AAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACG 616
Query: 350 HCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIW 409
H G ++EG YF MK +G++P EH+ C +DLLSR+G +K+AY I+ MP +A +W
Sbjct: 617 HSGSVEEGKYYFNLMKS-FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVW 675
Query: 410 RTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQD 469
+L+ C IH + + + ++ L + +G Y LLSN+YA E W + + +R +M
Sbjct: 676 GSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSS 735
Query: 470 GVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVY 503
+KK PGYS +E+ +V+ F G+ + Q+ ++Y
Sbjct: 736 NLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIY 769
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 188/437 (43%), Gaps = 48/437 (10%)
Query: 46 LTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFT 105
+T+ + L + C SS + Q+HA + G +P LI + + +P S + LVF
Sbjct: 1 MTQYMPLFRSC-SSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDS-SRLVFE 58
Query: 106 MIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLN-VR 164
P+ F + +I+ A+ Y ++ + +P +L+A + S +
Sbjct: 59 AFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLS 118
Query: 165 EGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFAL---------- 214
G +H IK G + + SLL +Y G+ A KVF+ M R +
Sbjct: 119 VGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCL 178
Query: 215 -NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
NG +AL +F+ M +GVEPD T++S++ CAELG L + R VH + + +
Sbjct: 179 ENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDET 238
Query: 274 VVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQK 333
+ N+LL +Y+KCG + ++++F ++ ++N VSWT +I F
Sbjct: 239 LCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSG 298
Query: 334 LAPGEITFVGVLYACSHCGMLDE-----GFDYFRRMKEEYG------------------- 369
+ P +T VL +C G++ E GF R + Y
Sbjct: 299 IEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDC 358
Query: 370 ------IAPR-IEHYGCMVDLLSRAGLVKQAYEYIQNMPVQ---PNAVIWRTLLGACTIH 419
++ R I + ++ L + G+V QA + M Q P+A + + AC
Sbjct: 359 ETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENA 418
Query: 420 GHLSLGEIARSHLLKLE 436
G + LG+ H+++ +
Sbjct: 419 GLVPLGKQIHGHVIRTD 435
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 134/393 (34%), Positives = 218/393 (55%), Gaps = 20/393 (5%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A VF + N +W ++ Y +S + + A + M E + ++ L+ + K
Sbjct: 164 ARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMP----ERNLGSWNALVDGLVK 219
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE-----------SM 208
S ++ + L K S S++ YA GD SA +FE ++
Sbjct: 220 SGDLVNAKKLFDEMPKRDIISY----TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSAL 275
Query: 209 TDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGL 268
+A NG+PNEA +F EM A V+PD F +V L+SAC+++G EL +V YL +
Sbjct: 276 ILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMN 335
Query: 269 RENLH-VVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXX 327
+ + H VV AL+D+ AKCG + A ++F EM +R++VS+ +++ G+A++G G
Sbjct: 336 KFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFE 395
Query: 328 XXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRA 387
+ + P E+ F +L C +++EG YF M+++Y I +HY C+V+LLSR
Sbjct: 396 KMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRT 455
Query: 388 GLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLS 447
G +K+AYE I++MP + +A W +LLG C++HG+ + E+ HL +LEP+ +G YVLLS
Sbjct: 456 GKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLS 515
Query: 448 NLYASERRWTDVQTIRKSMLQDGVKKTPGYSLV 480
N+YA+ RWTDV +R M ++G+ K G S +
Sbjct: 516 NIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 180/388 (46%), Gaps = 35/388 (9%)
Query: 51 SLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNP 110
+L + C S H L QIHA IR G+ + ++ I + S S+ +SY+ VF + +P
Sbjct: 15 TLFKLCKSEIH-LNQIHARIIRKGLE-QDQNLISIFISSSSSSSSSLSYSSSVFERVPSP 72
Query: 111 NVFTWNTMIRGYAESQDPKPALH-FYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
+ WN +I+GY+ + R M PD +T+P ++K S + VR G ++
Sbjct: 73 GTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSV 132
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFAL-----------NGRP 218
H + ++ GF+ V V S + Y C D SA KVF M +R A+ +G
Sbjct: 133 HGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGEL 192
Query: 219 NEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNAL 278
EA ++F M E + + +L+ + G L ++ L + ++ ++
Sbjct: 193 EEAKSMFDLMP----ERNLGSWNALVDGLVKSGDLVNAKK----LFDEMPKRDIISYTSM 244
Query: 279 LDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGE 338
+D YAK G + A+ +F E +V +W+ LI+G A NG + + P E
Sbjct: 245 IDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDE 304
Query: 339 ITFVGVLYACSHCGMLD--EGFDYF--RRMKE--EYGIAPRIEHYGCMVDLLSRAGLVKQ 392
VG++ ACS G + E D + +RM + + + P ++D+ ++ G + +
Sbjct: 305 FIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVP------ALIDMNAKCGHMDR 358
Query: 393 AYEYIQNMPVQPNAVIWRTLLGACTIHG 420
A + + MP Q + V + +++ IHG
Sbjct: 359 AAKLFEEMP-QRDLVSYCSMMEGMAIHG 385
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 136/395 (34%), Positives = 209/395 (52%), Gaps = 17/395 (4%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALH-FYRQMTMSCVEPDTHTYPFLLKAVS 158
A VF + P+V W ++ ++++ + AL FY + PD T+ +L A
Sbjct: 217 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 276
Query: 159 KSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR------- 211
+++G+ +H I NG S V V +SLL +Y CG A +VF M+ +
Sbjct: 277 NLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSA 336
Query: 212 ----FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAG 267
+ NG +A+ +FREM E D + ++L ACA L A+ LG+ +H ++ G
Sbjct: 337 LLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRG 392
Query: 268 LRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXX 327
N+ V +AL+DLY K G I A +V+ +M RN+++W ++ LA NG G
Sbjct: 393 CFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFN 452
Query: 328 XXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRA 387
+ + P I+F+ +L AC H GM+DEG +YF M + YGI P EHY CM+DLL RA
Sbjct: 453 DMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRA 512
Query: 388 GLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLS-LGEIARSHLLKLEPKHSGDYVLL 446
GL ++A ++ + +A +W LLG C + S + E +++LEPK+ YVLL
Sbjct: 513 GLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLL 572
Query: 447 SNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVE 481
SN+Y + R D IRK M++ GV KT G S ++
Sbjct: 573 SNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 179/391 (45%), Gaps = 35/391 (8%)
Query: 51 SLLQYCA---SSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMI 107
SLLQ C S H + Q HA ++ G+ + ++G L+ L M VF
Sbjct: 66 SLLQTCNKVFSFIHGI-QFHAHVVKSGLET-DRNVGNSLLSLYFKLGPGMRETRRVFDGR 123
Query: 108 RNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGE 167
+ +W +M+ GY ++ AL + +M ++ + T +KA S+ VR G
Sbjct: 124 FVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGR 183
Query: 168 ALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTD-----------RFALNG 216
H V I +GFE F+ ++L ++Y + A +VF+ M + F+ N
Sbjct: 184 CFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKND 243
Query: 217 RPNEALTLFREM-SANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVV 275
EAL LF M G+ PDG T ++L+AC L L+ G+ +H L+ G+ N+ V
Sbjct: 244 LYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVE 303
Query: 276 NALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLA 335
++LLD+Y KCGS+REA+QVF M ++N VSW+ L+ G NG + L
Sbjct: 304 SSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL- 362
Query: 336 PGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYG------CMVDLLSRAGL 389
F VL AC+ G R KE +G R +G ++DL ++G
Sbjct: 363 ---YCFGTVLKACA-------GLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGC 412
Query: 390 VKQAYEYIQNMPVQPNAVIWRTLLGACTIHG 420
+ A M ++ N + W +L A +G
Sbjct: 413 IDSASRVYSKMSIR-NMITWNAMLSALAQNG 442
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 128/284 (45%), Gaps = 15/284 (5%)
Query: 150 YPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACG-DTESAHKVFE-- 206
Y LL+ +K + G H+ +K+G E+ V NSLL +Y G +VF+
Sbjct: 64 YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGR 123
Query: 207 ---------SMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGR 257
SM + +AL +F EM + G++ + FT+ S + AC+ELG + LGR
Sbjct: 124 FVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGR 183
Query: 258 RVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNG 317
H ++ G N + + L LY +A++VF EM E +V+ WT ++ + N
Sbjct: 184 CFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKND 243
Query: 318 -FGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEH 376
+ + L P TF VL AC + L +G + ++ GI +
Sbjct: 244 LYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITN-GIGSNVVV 302
Query: 377 YGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHG 420
++D+ + G V++A + M + N+V W LLG +G
Sbjct: 303 ESSLLDMYGKCGSVREARQVFNGMS-KKNSVSWSALLGGYCQNG 345
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 216 GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVV 275
G+ EA+ + ++ + SLL C ++ + G + H +++K+GL + +V
Sbjct: 40 GQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVG 99
Query: 276 NALLDLYAKCG-SIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKL 334
N+LL LY K G +RE ++VF ++ +SWT+++ G L
Sbjct: 100 NSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGL 159
Query: 335 APGEITFVGVLYACSHCG 352
E T + ACS G
Sbjct: 160 DANEFTLSSAVKACSELG 177
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 164/544 (30%), Positives = 266/544 (48%), Gaps = 68/544 (12%)
Query: 38 PENPLPHVLTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPM 97
P+N V+ K I L+ + ++H ++++ G+ + + L+ SL +
Sbjct: 44 PDNFTLPVVLKSIGRLRKVIEGE----KVHGYAVKAGLEF-DSYVSNSLMGMYASL-GKI 97
Query: 98 SYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTM-SCVEPDTHTYPFLLKA 156
H VF + +V +WN +I Y + + A+ +++M+ S ++ D T L A
Sbjct: 98 EITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSA 157
Query: 157 VSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFA--- 213
S N+ GE ++ + FE V + N+L+ ++ CG + A VF+SM D+
Sbjct: 158 CSALKNLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCW 216
Query: 214 ----------------------------------LNG-----RPNEALTLFREMSANGVE 234
+NG R +EAL LFR M G+
Sbjct: 217 TSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIR 276
Query: 235 PDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQV 294
PD F +VSLL+ CA+ GALE G+ +H Y+ + + + V AL+D+YAKCG I A +V
Sbjct: 277 PDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEV 336
Query: 295 FGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGML 354
F E++ER+ SWT+LI GLA+NG + ITFV VL AC+H G +
Sbjct: 337 FYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFV 396
Query: 355 DEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAV---IWRT 411
EG F M E + + P+ EH C++DLL RAGL+ +A E I M + + ++ +
Sbjct: 397 AEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCS 456
Query: 412 LLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGV 471
LL A +G++ + E L K+E S + LL+++YAS RW DV +R+ M G+
Sbjct: 457 LLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGI 516
Query: 472 KKTPGYSLVELGNRVYEFTMGDR--SHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLADI 529
+K PG S +E+ +EF +GD SHP+ ++ + + +T N++ D+
Sbjct: 517 RKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSM-------------LHQTTNLMLDL 563
Query: 530 EEEE 533
E +E
Sbjct: 564 EHKE 567
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 126/226 (55%), Gaps = 13/226 (5%)
Query: 104 FTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNV 163
++++ P++ +N M++ A+ + L + ++ + PD T P +LK++ + V
Sbjct: 3 MSLLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKV 62
Query: 164 REGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------F 212
EGE +H +K G E +V NSL+ +YA+ G E HKVF+ M R +
Sbjct: 63 IEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSY 122
Query: 213 ALNGRPNEALTLFREMSA-NGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLREN 271
NGR +A+ +F+ MS + ++ D T+VS LSAC+ L LE+G R++ +++ +
Sbjct: 123 VGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMS 181
Query: 272 LHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNG 317
+ + NAL+D++ KCG + +A+ VF M ++NV WT+++ G G
Sbjct: 182 VRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTG 227
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 127/275 (46%), Gaps = 17/275 (6%)
Query: 202 HKVFESMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHV 261
+K+ +S+ D + + L LF E+ G+ PD FT+ +L + L + G +VH
Sbjct: 15 NKMLKSLADGKSFT----KVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHG 70
Query: 262 YLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNG-FGX 320
Y +KAGL + +V N+L+ +YA G I +VF EM +R+VVSW LI NG F
Sbjct: 71 YAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFED 130
Query: 321 XXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCM 380
L E T V L ACS L+ G +R + E+ ++ RI + +
Sbjct: 131 AIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGN--AL 188
Query: 381 VDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHS 440
VD+ + G + +A +M N W ++ + G++S G I + +L E
Sbjct: 189 VDMFCKCGCLDKARAVFDSMR-DKNVKCWTSM-----VFGYVSTGRIDEARVL-FERSPV 241
Query: 441 GDYVL---LSNLYASERRWTDVQTIRKSMLQDGVK 472
D VL + N Y R+ + + + M G++
Sbjct: 242 KDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIR 276
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 136/405 (33%), Positives = 216/405 (53%), Gaps = 12/405 (2%)
Query: 111 NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALH 170
+V TWN + G ++ + AL +M D LKA S +R G+ +H
Sbjct: 244 SVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIH 303
Query: 171 SVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVF-----------ESMTDRFALNGRPN 219
+ I + ++ + VRN+L+ +Y+ C D A VF S+ +A +
Sbjct: 304 GLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSE 363
Query: 220 EALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAG-LRENLHVVNAL 278
EA L REM G +P+ T+ S+L CA + L+ G+ H Y+L+ ++ + N+L
Sbjct: 364 EASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSL 423
Query: 279 LDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGE 338
+D+YAK G I A+QV M +R+ V++T+LI G G G + P
Sbjct: 424 VDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDH 483
Query: 339 ITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQ 398
+T V VL ACSH ++ EG F +M+ EYGI P ++H+ CMVDL RAG + +A + I
Sbjct: 484 VTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIH 543
Query: 399 NMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTD 458
NMP +P+ W TLL AC IHG+ +G+ A LL+++P++ G YVL++N+YA+ W+
Sbjct: 544 NMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSK 603
Query: 459 VQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVY 503
+ +R M GVKK PG + ++ + F++GD S P++ + Y
Sbjct: 604 LAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTY 648
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 190/448 (42%), Gaps = 62/448 (13%)
Query: 45 VLTKCISLLQYCASSKHKLK--QIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHL 102
VL SLL C + L Q+HA I GV H+ L+ +V+ + + +
Sbjct: 42 VLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSV-----LVPKLVTFYSAFNLHNE 96
Query: 103 VFTMIRNPNVF---TWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
++I N ++ WN +I YA+++ + + Y++M + PD TYP +LKA +
Sbjct: 97 AQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGE 156
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-------- 211
+L+V G +H + ++S ++V N+L+ +Y + A ++F+ M +R
Sbjct: 157 TLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAV 216
Query: 212 ---FALNGRPNEALTLFREMSANGVE--------------------------------PD 236
+A G +EA LF +M +GVE P
Sbjct: 217 INCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPT 276
Query: 237 GFTVVSL---LSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQ 293
V++ L AC+ +GA+ LG+ +H + + +V N L+ +Y+KC +R A
Sbjct: 277 SLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALI 336
Query: 294 VFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGM 353
VF + EE ++ +W ++I G A P IT +L C+
Sbjct: 337 VFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIAN 396
Query: 354 LDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLL 413
L G ++ + + +VD+ +++G + A + + ++ + + V + +L
Sbjct: 397 LQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQ-VSDLMSKRDEVTYTSL- 454
Query: 414 GACTIHGHLSLGEIARSHLLKLEPKHSG 441
I G+ + GE + L E SG
Sbjct: 455 ----IDGYGNQGEGGVALALFKEMTRSG 478
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 136/263 (51%), Gaps = 18/263 (6%)
Query: 73 HGVPLHNP----DMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDP 128
HG+ +H+ D ++ + T+ S + +A +VF ++ TWN++I GYA+
Sbjct: 303 HGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKS 362
Query: 129 KPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNG-FESLVFVRNS 187
+ A H R+M ++ +P++ T +L ++ N++ G+ H ++ F+ + NS
Sbjct: 363 EEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNS 422
Query: 188 LLHIYAACGDTESAHKV-----------FESMTDRFALNGRPNEALTLFREMSANGVEPD 236
L+ +YA G +A +V + S+ D + G AL LF+EM+ +G++PD
Sbjct: 423 LVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPD 482
Query: 237 GFTVVSLLSACAELGALELGRRVHVYL-LKAGLRENLHVVNALLDLYAKCGSIREAQQVF 295
TVV++LSAC+ + G R+ + + + G+R L + ++DLY + G + +A+ +
Sbjct: 483 HVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDII 542
Query: 296 GEMEER-NVVSWTTLIVGLAVNG 317
M + + +W TL+ ++G
Sbjct: 543 HNMPYKPSGATWATLLNACHIHG 565
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 123/319 (38%), Gaps = 58/319 (18%)
Query: 127 DPKPALHFYRQMTMSCVEPDT--HTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFV 184
D R + S V D H+ LL A G +H+ I +G E +
Sbjct: 21 DAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVL 80
Query: 185 RNSLLHIYAACGDTESAHKVFES-----------MTDRFALNGRPNEALTLFREMSANGV 233
L+ Y+A A + E+ + +A N E + ++ M + G+
Sbjct: 81 VPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGI 140
Query: 234 EPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQ 293
PD FT S+L AC E + GR VH + + + +L+V NAL+ +Y + ++ A++
Sbjct: 141 RPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARR 200
Query: 294 VFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGM 353
+F M ER+ VSW +I A GM
Sbjct: 201 LFDRMFERDAVSWNAVINCYASE-----------------------------------GM 225
Query: 354 LDEGFDYFRRM----KEEYGIAPRIEHYGCMV--DLLSRAGLVKQAYEYIQNMPVQPNAV 407
E F+ F +M E I I GC+ + + GL+ + ++N P + V
Sbjct: 226 WSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISR----MRNFPTSLDPV 281
Query: 408 IWRTLLGACTIHGHLSLGE 426
L AC++ G + LG+
Sbjct: 282 AMIIGLKACSLIGAIRLGK 300
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 152/495 (30%), Positives = 242/495 (48%), Gaps = 63/495 (12%)
Query: 47 TKCISLLQYCASSKHKLKQIHAFSIRHGV---PLHNPDMGKHLIFTIVSLSAP------- 96
+ C LL+ C + KH L Q HA I G + +++F I S+S
Sbjct: 5 SSCSYLLKLCRTLKH-LHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEV 63
Query: 97 MSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKP--ALHFYRQMTMSCVEPDTHTYPFLL 154
+SYA VF I NP+ F +NT+IR +P + F+ +M V PD HT+PF+
Sbjct: 64 VSYATSVFRFITNPSTFCFNTIIR-ICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVF 122
Query: 155 KAVS--KSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE------ 206
KA + K+ ++ + LH ++ G S +F N+L+ +Y+ +SA ++F+
Sbjct: 123 KACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRD 182
Query: 207 ------------------------------------SMTDRFALNGRPNEALTLFREMSA 230
S+ +A EA+ LF EM A
Sbjct: 183 VVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVA 242
Query: 231 NGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIRE 290
G++PD +VS LSACA+ G + G+ +H Y + L + + L+D YAKCG I
Sbjct: 243 LGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDT 302
Query: 291 AQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSH 350
A ++F ++ + +W +I GLA++G G + P +TF+ VL CSH
Sbjct: 303 AMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSH 362
Query: 351 CGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPV----QPNA 406
G++DE + F +M+ Y + ++HYGCM DLL RAGL+++A E I+ MP +
Sbjct: 363 SGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKL 422
Query: 407 VIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSM 466
+ W LLG C IHG++ + E A + + L P+ G Y ++ +YA+ RW +V +R+ +
Sbjct: 423 LAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREII 482
Query: 467 LQD-GVKKTPGYSLV 480
+D VKK G+S V
Sbjct: 483 DRDKKVKKNVGFSKV 497
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 144/427 (33%), Positives = 217/427 (50%), Gaps = 46/427 (10%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A +F I ++ +W TMI G AL +Y +M ++P LL A ++
Sbjct: 258 AEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASAR 317
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGD---------------------- 197
S+ +G LH +K GF+ F++ +++H YA D
Sbjct: 318 SVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNAL 377
Query: 198 ---------TESAHKVFESMTDR--FALNG---------RPNEALTLFREM-SANGVEPD 236
E A +VF+ D+ F+ N P AL LFREM S++ V+PD
Sbjct: 378 IAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPD 437
Query: 237 GFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFG 296
T+VS+ SA + LG+LE G+R H YL + + N ++ A++D+YAKCGSI A +F
Sbjct: 438 AITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFH 497
Query: 297 E---MEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGM 353
+ + + W +I G A +G + P ITFVGVL AC H G+
Sbjct: 498 QTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGL 557
Query: 354 LDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLL 413
++ G YF MK ++GI P I+HYGCMVDLL +AG +++A E I+ MPV+ + +IW LL
Sbjct: 558 VELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLL 617
Query: 414 GACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKK 473
A HG++ + E+A + L ++P H G V+LSN+YA RW DV +R+ M V+
Sbjct: 618 SASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVEW 677
Query: 474 TPGYSLV 480
+ +S V
Sbjct: 678 SRAFSGV 684
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/451 (20%), Positives = 172/451 (38%), Gaps = 121/451 (26%)
Query: 103 VFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLN 162
+F ++ + ++ T+I+GYA++ A+ +R+M + + T ++ A S
Sbjct: 129 LFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGG 188
Query: 163 VREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR------FALNG 216
+ + L S+ IK E VFV +LLH+Y C + A K+F+ M +R LNG
Sbjct: 189 IWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNG 248
Query: 217 ------------------------------------RPNEALTLFREMSANGVEPDGFTV 240
+ +EAL + EM G++P +
Sbjct: 249 YSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMM 308
Query: 241 VSLLSACAELGALELGRRVHVYLLKAG-------------------------------LR 269
V LLSA A G ++H ++K G ++
Sbjct: 309 VDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVK 368
Query: 270 ENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVN-GFGXXXXXXXXX 328
+++ NAL+ + K G + +A++VF + ++++ SW +I G A +
Sbjct: 369 DHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREM 428
Query: 329 XXXQKLAPGEITFVGVLYACSHCGMLDEG---FDYFRRMKEEYGIAPRIEHYGCMVDLLS 385
++ P IT V V A S G L+EG DY I P ++D+ +
Sbjct: 429 ISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFST----IPPNDNLTAAIIDMYA 484
Query: 386 RAGLVKQA-------------------------------------YEYIQNMPVQPNAVI 408
+ G ++ A Y +Q++P++PN++
Sbjct: 485 KCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSIT 544
Query: 409 WRTLLGACTIHGHLSLGEIARSHLLKLEPKH 439
+ +L AC H L E+ +++ ++ H
Sbjct: 545 FVGVLSACC---HAGLVELGKTYFESMKSDH 572
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 122/278 (43%), Gaps = 52/278 (18%)
Query: 154 LKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAAC---GDTES---------- 200
L + + S +V G +H +K+G +S ++ NS+L++YA C D ES
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDS 107
Query: 201 ------------------AHKVFESMTDR-----------FALNGRPNEALTLFREMSAN 231
A K+F+ M +R +A N + +EA+ LFREM
Sbjct: 108 ASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNL 167
Query: 232 GVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREA 291
G+ + T+ +++SAC+ LG + R + +K L + V LL +Y C +++A
Sbjct: 168 GIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDA 227
Query: 292 QQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLY-ACSH 350
+++F EM ERN+V+W ++ NG+ ++ +I G + C
Sbjct: 228 RKLFDEMPERNLVTWNVML-----NGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLR 282
Query: 351 CGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAG 388
LDE Y+ M G+ P MVDLLS +
Sbjct: 283 KNQLDEALVYYTEML-RCGMKP---SEVMMVDLLSASA 316
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 113/282 (40%), Gaps = 73/282 (25%)
Query: 239 TVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGE- 297
+VS L +CA + GR++H +LK+GL N ++ N++L++YAKC + +A+ VF +
Sbjct: 43 ALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDH 102
Query: 298 ------------------------------MEERNVVSWTTLIVGLAVNGFGXXXXXXXX 327
M ER+ VS+TTLI G A N
Sbjct: 103 AKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFR 162
Query: 328 XXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIE----------HY 377
+ E+T V+ ACSH G + + RM + I ++E H
Sbjct: 163 EMRNLGIMLNEVTLATVISACSHLGGI-----WDCRMLQSLAIKLKLEGRVFVSTNLLHM 217
Query: 378 GC-------------------------MVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTL 412
C M++ S+AGL++QA E + + + V W T+
Sbjct: 218 YCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQI-TEKDIVSWGTM 276
Query: 413 LGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASER 454
+ C L + + +L+ K S + +++ L AS R
Sbjct: 277 IDGCLRKNQLDEALVYYTEMLRCGMKPS-EVMMVDLLSASAR 317
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 136/391 (34%), Positives = 207/391 (52%), Gaps = 19/391 (4%)
Query: 111 NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALH 170
N+ +WN+MI GYA++ D + ++ E D ++ ++ K + + + L
Sbjct: 219 NLISWNSMISGYAQTSD---GVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLF 275
Query: 171 SVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPN 219
V + V +++ YA G A +F+ M R + N
Sbjct: 276 DVMPRRD----VVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHM 331
Query: 220 EALTLFREMSANG-VEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNAL 278
EAL +F +M + PD T+V +L A A+LG L +H+Y+++ + AL
Sbjct: 332 EALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVAL 391
Query: 279 LDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGE 338
+D+Y+KCGSI+ A VF +E +++ W +I GLA++G G L P +
Sbjct: 392 IDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDD 451
Query: 339 ITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQ 398
ITFVGVL ACSH G++ EG F M+ ++ I PR++HYGCMVD+LSR+G ++ A I+
Sbjct: 452 ITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIE 511
Query: 399 NMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTD 458
MPV+PN VIWRT L AC+ H GE+ HL+ + YVLLSN+YAS W D
Sbjct: 512 EMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKD 571
Query: 459 VQTIRKSMLQDGVKKTPGYSLVELGNRVYEF 489
V+ +R M + ++K PG S +EL RV+EF
Sbjct: 572 VRRVRTMMKERKIEKIPGCSWIELDGRVHEF 602
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 185/445 (41%), Gaps = 67/445 (15%)
Query: 46 LTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAP--MSYAHLV 103
++ I +L C +S + QIH I+ G+ + N ++ ++ S P +A V
Sbjct: 12 ISSTIHVLGSCKTSD-DVNQIHGRLIKTGI-IKNSNLTTRIVLAFASSRRPYLADFARCV 69
Query: 104 F----------TMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFL 153
F + +P F WN +I+ ++ +DP+ AL M + V D + +
Sbjct: 70 FHEYHVCSFSFGEVEDP--FLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLV 127
Query: 154 LKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE------- 206
LKA S+ V+ G +H K G S +F++N L+ +Y CG + ++F+
Sbjct: 128 LKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDS 187
Query: 207 ----SMTDRFALNGRPNEALTLFREM--------------SANGVEPDGFTVVS-LLSAC 247
SM D + G A LF M S DG + S L +
Sbjct: 188 VSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADM 247
Query: 248 AELGALELGRRVHVY-----------LLKAGLRENLHVVNALLDLYAKCGSIREAQQVFG 296
E + + Y L R ++ ++D YAK G + A+ +F
Sbjct: 248 PEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFD 307
Query: 297 EMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQK-LAPGEITFVGVLYACSHCGMLD 355
+M R+VV++ +++ G N + + L P + T V VL A + G L
Sbjct: 308 QMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLS 367
Query: 356 EGFD-YFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQA---YEYIQNMPVQPNAVIWRT 411
+ D + +++++ + ++ ++D+ S+ G ++ A +E I+N + W
Sbjct: 368 KAIDMHLYIVEKQFYLGGKLG--VALIDMYSKCGSIQHAMLVFEGIENKSIDH----WNA 421
Query: 412 LLGACTIHGHLSLGEIARSHLLKLE 436
++G IHG LGE A LL++E
Sbjct: 422 MIGGLAIHG---LGESAFDMLLQIE 443
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 110/247 (44%), Gaps = 29/247 (11%)
Query: 89 TIVSLSAPMSYAH---LVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTM-SCVE 144
T++ A + + H +F + + +V +N+M+ GY +++ AL + M S +
Sbjct: 288 TMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLL 347
Query: 145 PDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKV 204
PD T +L A+++ + + +H ++ F + +L+ +Y+ CG + A V
Sbjct: 348 PDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLV 407
Query: 205 FESMTDR-----------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELG-- 251
FE + ++ A++G A + ++ ++PD T V +L+AC+ G
Sbjct: 408 FEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLV 467
Query: 252 -----ALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEME-ERNVVS 305
EL RR H + L ++D+ ++ GSI A+ + EM E N V
Sbjct: 468 KEGLLCFELMRRKH------KIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVI 521
Query: 306 WTTLIVG 312
W T +
Sbjct: 522 WRTFLTA 528
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 94/229 (41%), Gaps = 30/229 (13%)
Query: 87 IFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPD 146
+ + S + +A LVF I N ++ WN MI G A + A Q+ ++PD
Sbjct: 391 LIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPD 450
Query: 147 THTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE 206
T+ +L A S HS +K G +R E + +
Sbjct: 451 DITFVGVLNACS-----------HSGLVKEGLLCFELMRRK--------HKIEPRLQHYG 491
Query: 207 SMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYL-LK 265
M D + +G A L EM VEP+ + L+AC+ E G V +L L+
Sbjct: 492 CMVDILSRSGSIELAKNLIEEMP---VEPNDVIWRTFLTACSHHKEFETGELVAKHLILQ 548
Query: 266 AGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNV-----VSWTTL 309
AG + +V+ L ++YA G ++ ++V M+ER + SW L
Sbjct: 549 AGYNPSSYVL--LSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIEL 595
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 143/502 (28%), Positives = 237/502 (47%), Gaps = 85/502 (16%)
Query: 87 IFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPD 146
+ T+ + M A+ +F + N +WN MI+G+++ D + A+ + M +PD
Sbjct: 199 LLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPD 258
Query: 147 THTYPFLLKAVSK----------------SLNVREGEAL-------------------HS 171
T+ +L S+ S N GEAL H
Sbjct: 259 EVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHG 318
Query: 172 VTIKNGFESLVFVRNSLLHIYAACGDTESAHKVF-----------ESMTDRFALNGRPNE 220
IK GFE + RN+L+H+Y G + A +F S+ F G+ +E
Sbjct: 319 YVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDE 378
Query: 221 ALTLF---------------------------------------REMSANGVEPDGFTVV 241
AL+LF R+M + V + T+
Sbjct: 379 ALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTIC 438
Query: 242 SLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEER 301
+LS CAEL AL LGR +H ++++ + EN+ V NAL+++YAKCG + E VF + ++
Sbjct: 439 CILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDK 498
Query: 302 NVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYF 361
+++SW ++I G ++GF P I V VL ACSH G++++G + F
Sbjct: 499 DLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIF 558
Query: 362 RRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGH 421
M + +G+ P+ EHY C+VDLL R G +K+A E ++NMP++P + LL +C +H +
Sbjct: 559 YSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKN 618
Query: 422 LSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVE 481
+ + E S L LEP+ +G Y+LLSN+Y++ RW + +R + +KK G S +E
Sbjct: 619 VDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIE 678
Query: 482 LGNRVYEFTMGDRSHPQSQDVY 503
+ + Y+F+ G + + +Y
Sbjct: 679 VKKKKYKFSSGSIVQSEFETIY 700
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 92/191 (48%), Gaps = 13/191 (6%)
Query: 175 KNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMSANGVE 234
+N FE++ V S L ++ + +H ++E+ AL L+R M G+
Sbjct: 109 RNVFETVSLVLLSDLRLWNSILKANVSHGLYEN-------------ALELYRGMRQRGLT 155
Query: 235 PDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQV 294
DG+ + +L AC LG L R H +++ GL+ENLHVVN LL LY K G + +A +
Sbjct: 156 GDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNL 215
Query: 295 FGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGML 354
F EM RN +SW +I G + ++ P E+T+ VL S CG
Sbjct: 216 FVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKF 275
Query: 355 DEGFDYFRRMK 365
++ YF M+
Sbjct: 276 EDVLKYFHLMR 286
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/400 (32%), Positives = 203/400 (50%), Gaps = 11/400 (2%)
Query: 210 DRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLR 269
D F +G+ +AL +++ D ++ L C E L+ + VH + +
Sbjct: 227 DAFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSH 286
Query: 270 ENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXX 329
+L + LL++Y+ CG EA VF +M E+N+ +W +I A NGFG
Sbjct: 287 LDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRF 346
Query: 330 XXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGL 389
+ P F G+ YAC G +DEG +F M +YGIAP IE Y +V++ + G
Sbjct: 347 KEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGF 406
Query: 390 VKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNL 449
+ +A E+++ MP++PN +W TL+ +HG+L LG+ + L+P
Sbjct: 407 LDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTR---------- 456
Query: 450 YASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXX 509
+ R + + ++ +KK G L + + + EF GD + P++ +++
Sbjct: 457 LNKQSREGFIPVKASDVEKESLKKRSGI-LHGVKSSMQEFRAGDTNLPENDELFQLLRNL 515
Query: 510 XXXXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVC 569
GYV T L DI++E KE L HSE++A A +LN+AP P V+KNLRVC
Sbjct: 516 KMHMVEVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVC 575
Query: 570 ADCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
DCH A+K++S + RE++ RD RFH + G C+CKDYW
Sbjct: 576 VDCHNALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 188 LLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMSANGVEPD 236
LL +Y+ CG A VFE M+++ FA NG +A+ +F G PD
Sbjct: 295 LLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPD 354
Query: 237 GFTVVSLLSACAELGALELGRRVHVYLLKA--GLRENLHVVNALLDLYAKCGSIREAQQV 294
G + AC LG ++ G +H + G+ ++ +L+++YA G + EA +
Sbjct: 355 GQLFRGIFYACGMLGDVDEG-LLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEF 413
Query: 295 FGEME-ERNVVSWTTLI 310
M E NV W TL+
Sbjct: 414 VERMPMEPNVDVWETLM 430
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/404 (32%), Positives = 206/404 (50%), Gaps = 13/404 (3%)
Query: 94 SAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFL 153
S + +F+ I P+V WN M+ GY+ + + A+ +RQM ++PD T +
Sbjct: 363 SGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVI 422
Query: 154 LKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE------- 206
L + ++ + G+ +H V I+ + + L+ +Y+ C E + +F+
Sbjct: 423 LSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELD 482
Query: 207 -----SMTDRFALNGRPNEALTLFREMSANGVE-PDGFTVVSLLSACAELGALELGRRVH 260
SM F N +AL LFR M V P+ + ++LS+C+ L +L GR+ H
Sbjct: 483 IACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFH 542
Query: 261 VYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGX 320
++K+G + V AL D+Y KCG I A+Q F + +N V W +I G NG G
Sbjct: 543 GLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGD 602
Query: 321 XXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCM 380
P ITFV VL ACSH G+++ G + M+ +GI P ++HY C+
Sbjct: 603 EAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICI 662
Query: 381 VDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHS 440
VD L RAG ++ A + + P + ++V+W LL +C +HG +SL L++L+P+ S
Sbjct: 663 VDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSS 722
Query: 441 GDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGN 484
YVLLSN Y+S R+W D ++ M ++ V KTPG S GN
Sbjct: 723 AAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYGN 766
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 160/366 (43%), Gaps = 40/366 (10%)
Query: 103 VFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLN 162
VF + +V +WN MI + AL Y++M P T +L A SK L+
Sbjct: 94 VFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLD 153
Query: 163 VREGEALHSVTIKNGFESLVFVRNSLLHIYAACG-DTESAHKVFESMTD----------- 210
G H V +K G + +FV N+LL +YA CG + +VFES++
Sbjct: 154 GVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIG 213
Query: 211 RFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACA---------ELGALELGRRVHV 261
A + EA+ +FR M GV+ D + ++LS A E+ ELG+++H
Sbjct: 214 GLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHC 273
Query: 262 YLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXX 321
L+ G +LH+ N+LL++YAK + A+ +F EM E NVVSW +IVG
Sbjct: 274 LALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDK 333
Query: 322 XXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMV 381
P E+T + VL AC G ++ G F + + P + + M+
Sbjct: 334 SVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ-----PSVSAWNAML 388
Query: 382 DLLSRAGLVKQAYEYIQNMPVQ---PNAVIWRTLLGACT----------IHGHLSLGEIA 428
S ++A + M Q P+ +L +C IHG + EI+
Sbjct: 389 SGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEIS 448
Query: 429 R-SHLL 433
+ SH++
Sbjct: 449 KNSHIV 454
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 166/365 (45%), Gaps = 45/365 (12%)
Query: 64 KQIHAFSIRHG----VPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMI 119
KQIH ++R G + L+N + I + + M+ A L+F + NV +WN MI
Sbjct: 269 KQIHCLALRLGFGGDLHLNNS------LLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMI 322
Query: 120 RGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFE 179
G+ + ++ F +M S +P+ T +L A +S +V G + S +
Sbjct: 323 VGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPS-- 380
Query: 180 SLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMSANGVEPDGFT 239
V N++L Y S ++ +E EA++ FR+M ++PD T
Sbjct: 381 --VSAWNAMLSGY-------SNYEHYE-------------EAISNFRQMQFQNLKPDKTT 418
Query: 240 VVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGE-M 298
+ +LS+CA L LE G+++H +++ + +N H+V+ L+ +Y++C + ++ +F + +
Sbjct: 419 LSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCI 478
Query: 299 EERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQK-LAPGEITFVGVLYACSH-CGMLDE 356
E ++ W ++I G N L P E +F VL +CS C +L
Sbjct: 479 NELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHG 538
Query: 357 GFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGAC 416
+ +K Y +E + D+ + G + A ++ + ++ N VIW +
Sbjct: 539 RQFHGLVVKSGYVSDSFVET--ALTDMYCKCGEIDSARQFFDAV-LRKNTVIWNEM---- 591
Query: 417 TIHGH 421
IHG+
Sbjct: 592 -IHGY 595
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 92/192 (47%), Gaps = 43/192 (22%)
Query: 166 GEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMT--DRFALN-------- 215
G+ +H ++ G +S ++ N LL +Y CGD + A KVF+ M+ D ++ N
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 216 --------------------------------GRPNEALTLFREMSANGVEPDGFTVVSL 243
G +AL +++ M +G P FT+ S+
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 244 LSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIRE-AQQVFGEMEERN 302
LSAC+++ G R H +K GL +N+ V NALL +YAKCG I + +VF + + N
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 303 VVSWTTLIVGLA 314
VS+T +I GLA
Sbjct: 205 EVSYTAVIGGLA 216
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 88/228 (38%), Gaps = 36/228 (15%)
Query: 256 GRRVHVYLLKAGLRENLHVVNALLDLYAKCG------------SIR-------------- 289
G+ +H ++++ G++ + ++ N LLDLY +CG S+R
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 290 -----EAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGV 344
EA +VF M ER+VVSW +I L GF P T V
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 345 LYACSHCGMLDEGFDY-FRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQ 403
L ACS +LD F + + G+ I ++ + ++ G + + Q
Sbjct: 145 LSACSK--VLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQ 202
Query: 404 PNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYA 451
PN V + ++G + E + L E D V LSN+ +
Sbjct: 203 PNEVSYTAVIGGLARENKVL--EAVQMFRLMCEKGVQVDSVCLSNILS 248
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/494 (30%), Positives = 227/494 (45%), Gaps = 77/494 (15%)
Query: 57 ASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAP--MSYAHLVFTMIRNPNVFT 114
A S +++Q HAF ++ G+ H+ L+ + P +SYAH + I +PN FT
Sbjct: 49 AKSLTEIQQAHAFMLKTGL-FHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFT 107
Query: 115 WNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTI 174
N++IR YA S P+ AL +R+M + V PD +++ F+LKA + EG +H + I
Sbjct: 108 HNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFI 167
Query: 175 KNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALN-----------GRPNEALT 223
K+G + VFV N+L+++Y G E A KV + M R A++ G +EA
Sbjct: 168 KSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARA 227
Query: 224 LFREMSANGVEP-----DGFTVVSLLSACAEL-------GALELGRRVHVYLLKAGLREN 271
LF EM VE G+ L+ E+ + V Y E
Sbjct: 228 LFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEV 287
Query: 272 LHVVNALLD--------------------------------------------------- 280
L V N +LD
Sbjct: 288 LEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVD 347
Query: 281 LYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEIT 340
+Y+KCG I +A +VF +R+V +W ++I L+V+G G + P IT
Sbjct: 348 MYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGIT 407
Query: 341 FVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNM 400
F+GVL AC+H GMLD+ F M Y + P IEHYGCMVDLL R G +++A E + +
Sbjct: 408 FIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEI 467
Query: 401 PVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQ 460
P +++ +LLGAC G L E + LL+L + S Y +SNLYAS+ RW V
Sbjct: 468 PADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVI 527
Query: 461 TIRKSMLQDGVKKT 474
R++M + V ++
Sbjct: 528 DGRRNMRAERVNRS 541
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 232 bits (592), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 134/398 (33%), Positives = 209/398 (52%), Gaps = 47/398 (11%)
Query: 52 LLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPN 111
L+ C S+ +LKQIH I+H L N + + ++ S YA LVF +++P+
Sbjct: 26 FLRTC-SNFSQLKQIHTKIIKHN--LTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPS 82
Query: 112 VFTWNTMIRGYAESQDPKPALHFYRQMTMS-CVEPDTHTYPFLLKAVSKSLNVREGEALH 170
FTWN MIR + + P+ AL + M +S + D T+PF++KA S ++R G +H
Sbjct: 83 TFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVH 142
Query: 171 SVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR------------------- 211
+ IK GF + VF +N+L+ +Y CG +S KVF+ M R
Sbjct: 143 GLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLD 202
Query: 212 -----------------------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACA 248
+ N RP+EA LFR M + V+P+ FT+V+LL A
Sbjct: 203 SAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAST 262
Query: 249 ELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTT 308
+LG+L +GR VH Y K G + + AL+D+Y+KCGS+++A++VF M+ +++ +W +
Sbjct: 263 QLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNS 322
Query: 309 LIVGLAVNGFGXXXXXX-XXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEE 367
+I L V+G G + P ITFVGVL AC++ G + +G YF RM +
Sbjct: 323 MITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQV 382
Query: 368 YGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPN 405
YGI+P EH CM+ LL +A V++A +++M P+
Sbjct: 383 YGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 127/393 (32%), Positives = 204/393 (51%), Gaps = 12/393 (3%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A ++ + ++ +++ YAE D A+ ++ + C++ D +L K
Sbjct: 300 AERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKK 359
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALN---- 215
S ++ G +LH IK+G + V N L+ +Y+ D E+ +FE + + ++
Sbjct: 360 SSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSV 419
Query: 216 -------GRPNEALTLFREMS-ANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAG 267
GR + A +F +M G+ PD T+ SLL+ C++L L LG+ +H Y L+
Sbjct: 420 ISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNN 479
Query: 268 LRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXX 327
V AL+D+YAKCG+ +A+ VF ++ +W ++I G +++G
Sbjct: 480 FENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYL 539
Query: 328 XXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRA 387
+ L P EITF+GVL AC+H G +DEG FR M +E+GI+P ++HY MV LL RA
Sbjct: 540 EMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRA 599
Query: 388 GLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLS 447
L +A I M ++P++ +W LL AC IH L +GE + L+ K+ G YVL+S
Sbjct: 600 CLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMS 659
Query: 448 NLYASERRWTDVQTIRKSMLQDGVKKTPGYSLV 480
NLYA+E W DV +R M +G G S +
Sbjct: 660 NLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 129/275 (46%), Gaps = 25/275 (9%)
Query: 105 TMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNV- 163
T+ R+ + F +++++ + + +R + S + P+ T L+A + S N
Sbjct: 8 TLYRDLSYF--HSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSF 65
Query: 164 -REGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR----------- 211
+ E + + K+G + V+V+ SLL++Y G SA +F+ M +R
Sbjct: 66 KLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICG 125
Query: 212 FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLREN 271
++ NG +A LF M G P T+V+LL C + G + GR VH K+GL +
Sbjct: 126 YSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELD 185
Query: 272 LHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXX 331
V NAL+ Y+KC + A+ +F EM++++ VSW T+I + +G
Sbjct: 186 SQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFE 245
Query: 332 QKLAPGEITFVGVLYA-CSH---------CGMLDE 356
+ + +T + +L A SH CGM+++
Sbjct: 246 KNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVND 280
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 175/395 (44%), Gaps = 38/395 (9%)
Query: 47 TKCISLLQYCASSK--HKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVF 104
T ++LL +C + + +H + + G+ L + K+ + + S A + A ++F
Sbjct: 152 TTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQV--KNALISFYSKCAELGSAEVLF 209
Query: 105 TMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKA-VSKSLNV 163
+++ + +WNTMI Y++S + A+ ++ M VE T LL A VS
Sbjct: 210 REMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSH---- 265
Query: 164 REGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVF-----------ESMTDRF 212
E LH + +K G + + V SL+ Y+ CG SA +++ S+ +
Sbjct: 266 ---EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCY 322
Query: 213 ALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENL 272
A G + A+ F + ++ D +V +L C + +++G +H Y +K+GL
Sbjct: 323 AEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKT 382
Query: 273 HVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXX-XXXXX 331
VVN L+ +Y+K + +F +++E ++SW ++I G +G
Sbjct: 383 LVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLT 442
Query: 332 QKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPR----IEHYGC--MVDLLS 385
L P IT +L CS L+ G KE +G R E++ C ++D+ +
Sbjct: 443 GGLLPDAITIASLLAGCSQLCCLNLG-------KELHGYTLRNNFENENFVCTALIDMYA 495
Query: 386 RAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHG 420
+ G QA +++ P W +++ ++ G
Sbjct: 496 KCGNEVQAESVFKSIKA-PCTATWNSMISGYSLSG 529
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 144/338 (42%), Gaps = 25/338 (7%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A ++F + + WN +I GY+ + A + M P T LL +
Sbjct: 104 AQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQ 163
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-------- 211
V +G ++H V K+G E V+N+L+ Y+ C + SA +F M D+
Sbjct: 164 CGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTM 223
Query: 212 ---FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGL 268
++ +G EA+T+F+ M VE T+++LLSA L H ++K G+
Sbjct: 224 IGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL------HCLVVKCGM 277
Query: 269 RENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXX 328
++ VV +L+ Y++CG + A++++ ++ ++V T+++ A G
Sbjct: 278 VNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSK 337
Query: 329 XXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAG 388
+ + VG+L+ C +D G + G+ + ++ + S+
Sbjct: 338 TRQLCMKIDAVALVGILHGCKKSSHIDIGMS-LHGYAIKSGLCTKTLVVNGLITMYSKFD 396
Query: 389 LVKQA---YEYIQNMPVQPNAVIWRTLLGACTIHGHLS 423
V+ +E +Q P+ + W +++ C G S
Sbjct: 397 DVETVLFLFEQLQETPL----ISWNSVISGCVQSGRAS 430
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 4/196 (2%)
Query: 222 LTLFREMSANGVEPDGFTVVSLLSACA-ELGALELG-RRVHVYLLKAGLRENLHVVNALL 279
+T+FR++ + + P+ FT+ L A + +L +V +L K+GL ++V +LL
Sbjct: 33 ITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLL 92
Query: 280 DLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEI 339
+LY K G + AQ +F EM ER+ V W LI G + NG+ Q +P
Sbjct: 93 NLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSAT 152
Query: 340 TFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQN 399
T V +L C CG + +G + + G+ + ++ S+ + A +
Sbjct: 153 TLVNLLPFCGQCGFVSQGRS-VHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFRE 211
Query: 400 MPVQPNAVIWRTLLGA 415
M + V W T++GA
Sbjct: 212 MK-DKSTVSWNTMIGA 226
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 133/413 (32%), Positives = 207/413 (50%), Gaps = 47/413 (11%)
Query: 115 WNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTI 174
+NT+IR Y + + K +L + M S V+P+ T+P L+KA S +V G ALH +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 175 KNGFESLVFVRNSLLHIYAACGDTESAHKVFE-----------SMTDRFALNGRPN---- 219
K GF FV+ S + Y GD ES+ K+F+ S+ D NG +
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 220 ---------------------------EALTLFREMSANG---VEPDGFTVVSLLSACAE 249
+AL +F EM N + P+ T VS+LS+CA
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 250 L--GALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWT 307
G + LG+++H Y++ + + ALLD+Y K G + A +F ++ ++ V +W
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 308 TLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEE 367
+I LA NG + P IT + +L AC+ ++D G F + E
Sbjct: 294 AIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSE 353
Query: 368 YGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEI 427
Y I P EHYGC+VDL+ RAGL+ A +IQ++P +P+A + LLGAC IH + LG
Sbjct: 354 YKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNT 413
Query: 428 ARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLV 480
L+ L+P+H G YV LS A + W++ + +RK+M++ G++K P YS++
Sbjct: 414 VGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYSVL 466
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 85/176 (48%), Gaps = 16/176 (9%)
Query: 97 MSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTM---SCVEPDTHTYPFL 153
M YA F + +V +W T+I G+++ AL + +M + + P+ T+ +
Sbjct: 168 MDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSV 227
Query: 154 LKAVSK--SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR 211
L + + +R G+ +H + + +LL +Y GD E A +F+ + D+
Sbjct: 228 LSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDK 287
Query: 212 -----------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELG 256
A NGRP +AL +F M ++ V P+G T++++L+ACA ++LG
Sbjct: 288 KVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLG 343
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 147/427 (34%), Positives = 221/427 (51%), Gaps = 58/427 (13%)
Query: 112 VFTWNTMIRGYAESQDPKPA---------LHFYRQMTMSCVEPDTHTYPFLLKAVS--KS 160
+F +N ++R Y+ + P A LHF S D+ TY FLLKA S +
Sbjct: 77 LFLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRF 136
Query: 161 LNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR--------- 211
++ G LH +T+K GFES V+V+ +L+ +Y G+ AHKVF+ M +R
Sbjct: 137 PSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMI 196
Query: 212 ---------------------------------FALNGRPNEALTLFREMSA-NGVEPDG 237
+A +P EA+ LF M A + ++P+
Sbjct: 197 TGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNE 256
Query: 238 FTVVSLLSACAELGALELGRRVHVYLLKAGLRE-NLHVVNALLDLYAKCGSIREAQQVFG 296
T++++L A LG L++ VH Y+ K G ++ V N+L+D YAKCG I+ A + F
Sbjct: 257 ITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFI 316
Query: 297 EMEE--RNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGML 354
E+ +N+VSWTT+I A++G G L P +T + VL ACSH G+
Sbjct: 317 EIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLA 376
Query: 355 DEGF-DYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLL 413
+E F ++F M EY I P ++HYGC+VD+L R G +++A + +P++ AV+WR LL
Sbjct: 377 EEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLL 436
Query: 414 GACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKK 473
GAC+++ L E L++LE H GDYVL+SN++ R+ D Q RK M GV K
Sbjct: 437 GACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAK 496
Query: 474 TPGYSLV 480
PG+S V
Sbjct: 497 LPGHSQV 503
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 128/273 (46%), Gaps = 29/273 (10%)
Query: 66 IHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAES 125
I A + +P NP +I + +L A + N V +W T+I GYA
Sbjct: 175 IDAHKVFDEMPERNPVTWNVMITGLTNL-GDFEKALCFLEKMPNRTVVSWTTIIDGYARV 233
Query: 126 QDPKPA-LHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESL-VF 183
PK A L F R + ++P+ T +L AV +++ ++H+ K GF +
Sbjct: 234 DKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIR 293
Query: 184 VRNSLLHIYAACGDTESAHKVF-------------ESMTDRFALNGRPNEALTLFREMSA 230
V NSL+ YA CG +SA K F +M FA++G EA+++F++M
Sbjct: 294 VTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMER 353
Query: 231 NGVEPDGFTVVSLLSACAELGALE------LGRRVHVYLLKAGLRENLHVVNALLDLYAK 284
G++P+ T++S+L+AC+ G E V+ Y + ++ L+D+ +
Sbjct: 354 LGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKH----YGCLVDMLRR 409
Query: 285 CGSIREAQQVFGE--MEERNVVSWTTLIVGLAV 315
G + EA+++ E +EE+ VV W L+ +V
Sbjct: 410 KGRLEEAEKIALEIPIEEKAVV-WRMLLGACSV 441
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 129/318 (40%), Gaps = 57/318 (17%)
Query: 162 NVREGEALHSVTIKNGFESL--------VFVRNSLLHIYAACGDTESAHKVFESMTDRFA 213
N++ LHS +GF L +F+ N LL Y+ A+ +++ + R
Sbjct: 49 NLKIIHQLHSHFTTSGFLLLHQKQNSGKLFLFNPLLRCYSLGETPLHAYFLYDQL-QRLH 107
Query: 214 LNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAE--LGALELGRRVHVYLLKAGLREN 271
N++L F D FT + LL A + +L LG +H LK G +
Sbjct: 108 FLSDHNKSLPPF----------DSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESH 157
Query: 272 LHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLA----------------- 314
++V AL+ +Y G++ +A +VF EM ERN V+W +I GL
Sbjct: 158 VYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPN 217
Query: 315 ---------VNGFGXXXXXXXXXXXXQKLA------PGEITFVGVLYACSHCGMLDEGFD 359
++G+ ++ P EIT + +L A + G L
Sbjct: 218 RTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGS 277
Query: 360 YFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPV-QPNAVIWRTLLGACTI 418
+ + + I ++D ++ G ++ A+++ +P + N V W T++ A I
Sbjct: 278 VHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAI 337
Query: 419 HGHLSLGEIARSHLLKLE 436
HG +G+ A S +E
Sbjct: 338 HG---MGKEAVSMFKDME 352
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 135/425 (31%), Positives = 218/425 (51%), Gaps = 16/425 (3%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVF---TMIRNPNVFTWNTMIR 120
KQ+H ++ G L + + + S + YA VF + N +V WN+M+
Sbjct: 258 KQLHCCVVKSG--LESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLS 315
Query: 121 GYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFES 180
G+ +++ + AL Q+ S + D++T LK +N+R G +HS+ + +G+E
Sbjct: 316 GFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYEL 375
Query: 181 LVFVRNSLLHIYAACGDTESAHKVFESMTDRFAL-----------NGRPNEALTLFREMS 229
V + L+ ++A G+ + AHK+F + ++ + +G + A LFRE+
Sbjct: 376 DYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELI 435
Query: 230 ANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIR 289
G++ D F V ++L C+ L +L G+++H +K G AL+D+Y KCG I
Sbjct: 436 KLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEID 495
Query: 290 EAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACS 349
+F M ER+VVSWT +IVG NG + P ++TF+G+L AC
Sbjct: 496 NGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACR 555
Query: 350 HCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIW 409
H G+L+E MK EYG+ P +EHY C+VDLL +AGL ++A E I MP++P+ IW
Sbjct: 556 HSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIW 615
Query: 410 RTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQD 469
+LL AC H + L + LLK P Y LSN YA+ W + +R++ +
Sbjct: 616 TSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKL 675
Query: 470 GVKKT 474
G K++
Sbjct: 676 GAKES 680
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 164/395 (41%), Gaps = 61/395 (15%)
Query: 97 MSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKA 156
M A +F + PNV +WN +I G+ + P+ AL F +M + D P LKA
Sbjct: 189 MDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFALPCGLKA 247
Query: 157 VSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGD--------------TESAH 202
S + G+ LH +K+G ES F ++L+ +Y+ CG S+
Sbjct: 248 CSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSV 307
Query: 203 KVFESMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVY 262
V+ SM F +N AL L ++ + + D +T+ L C L LG +VH
Sbjct: 308 AVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSL 367
Query: 263 LLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXX 322
++ +G + V + L+DL+A G+I++A ++F + +++++++ LI G +GF
Sbjct: 368 VVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLA 427
Query: 323 XXXXXXXXXQKLAPGEITFVGVLYACS--------------------------------- 349
L + +L CS
Sbjct: 428 FYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDM 487
Query: 350 --HCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQ---NMPVQP 404
CG +D G F M E + G +V + G V++A+ Y N+ ++P
Sbjct: 488 YVKCGEIDNGVVLFDGMLER----DVVSWTGIIVG-FGQNGRVEEAFRYFHKMINIGIEP 542
Query: 405 NAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKH 439
N V + LL AC H L E ARS L ++ ++
Sbjct: 543 NKVTFLGLLSACR---HSGLLEEARSTLETMKSEY 574
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 170/431 (39%), Gaps = 51/431 (11%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
+ I A I+ G+ N + ++I V +S AH VF + N+ TW TM+ GY
Sbjct: 25 ESIQAHVIKQGIS-QNVFIANNVISMYVDFRL-LSDAHKVFDEMSERNIVTWTTMVSGYT 82
Query: 124 ESQDPKPALHFYRQMTMSCVEP-DTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLV 182
P A+ YR+M S E + Y +LKA +++ G ++ K V
Sbjct: 83 SDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDV 142
Query: 183 FVRNSLLHIYAACGDTESAHKVFE-----------SMTDRFALNGRPNEALTLFREM--- 228
+ NS++ +Y G A+ F+ ++ + G +EA+TLF M
Sbjct: 143 VLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQP 202
Query: 229 ---------------------------SANGVEPDGFTVVSLLSACAELGALELGRRVHV 261
G+ DGF + L AC+ G L +G+++H
Sbjct: 203 NVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHC 262
Query: 262 YLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEME---ERNVVSWTTLIVGLAVNGF 318
++K+GL + ++AL+D+Y+ CGS+ A VF + + +V W +++ G +N
Sbjct: 263 CVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEE 322
Query: 319 GXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYG 378
L T G L C + L G + G
Sbjct: 323 NEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQ-VHSLVVVSGYELDYIVGS 381
Query: 379 CMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPK 438
+VDL + G ++ A++ +P + + + L+ C G SL L+KL
Sbjct: 382 ILVDLHANVGNIQDAHKLFHRLP-NKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKL--G 438
Query: 439 HSGDYVLLSNL 449
D ++SN+
Sbjct: 439 LDADQFIVSNI 449
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 123/278 (44%), Gaps = 56/278 (20%)
Query: 164 REGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------F 212
+ GE++ + IK G VF+ N+++ +Y AHKVF+ M++R +
Sbjct: 22 KRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGY 81
Query: 213 ALNGRPNEALTLFREMSANGVEP-DGFTVVSLLSACAELGALELGRRVHVYLLKAGLREN 271
+G+PN+A+ L+R M + E + F ++L AC +G ++LG V+ + K LR +
Sbjct: 82 TSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGD 141
Query: 272 LHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXX 331
+ ++N+++D+Y K G + EA F E+ + SW TLI G
Sbjct: 142 VVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYC----------------- 184
Query: 332 QKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVK 391
G++DE F RM + P + + C++ G
Sbjct: 185 ------------------KAGLMDEAVTLFHRMPQ-----PNVVSWNCLISGFVDKG-SP 220
Query: 392 QAYEYIQNMPVQPNAVIWRTL---LGACTIHGHLSLGE 426
+A E++ M + + L L AC+ G L++G+
Sbjct: 221 RALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGK 258
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 85/172 (49%), Gaps = 4/172 (2%)
Query: 247 CAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSW 306
C ++ A + G + +++K G+ +N+ + N ++ +Y + +A +VF EM ERN+V+W
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 307 TTLIVGLAVNGF-GXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMK 365
TT++ G +G ++ A E + VL AC G + G + R+
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIG 134
Query: 366 EEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLL-GAC 416
+E + + +VD+ + G + +A + + ++P++ W TL+ G C
Sbjct: 135 KE-NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSWNTLISGYC 184
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 120/383 (31%), Positives = 198/383 (51%), Gaps = 29/383 (7%)
Query: 227 EMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCG 286
E+ G PD V L +CA L +LE ++VH + L++ R + + N ++ ++ +C
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 287 SIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLY 346
SI +A++VF M ++++ SW ++ + NG G L P E TF+ V
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 347 ACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNA 406
AC+ G ++E F +F MK E+GI+P+ EHY ++ +L + G + +A +YI+++P +P A
Sbjct: 346 ACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTA 405
Query: 407 VIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSM 466
W + +HG + L + ++ ++P + + +
Sbjct: 406 DFWEAMRNYARLHGDIDLEDYMEELMVDVDPS---------------------KAVINKI 444
Query: 467 LQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVL 526
K ++V +R+ EF ++ Y YVP T VL
Sbjct: 445 PTPPPKSFKETNMVTSKSRILEF--------RNLTFYKDEAKEMAAKKGVVYVPDTRFVL 496
Query: 527 ADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDRE 586
DI++E KEQAL YHSE++AIA+ ++ T P + ++KNLRVC DCH IK++SK+ R
Sbjct: 497 HDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRV 556
Query: 587 IVIRDRSRFHHFRGGKCSCKDYW 609
+++RD RFHHF+ GKCSC DYW
Sbjct: 557 LIVRDNKRFHHFKDGKCSCGDYW 579
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 80/167 (47%), Gaps = 14/167 (8%)
Query: 145 PDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKV 204
PD + L ++ + ++ + +H +++ F + N ++ ++ C A +V
Sbjct: 234 PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRV 293
Query: 205 FESMTDR-----------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGAL 253
F+ M D+ ++ NG ++AL LF EM+ +G++P+ T +++ ACA +G +
Sbjct: 294 FDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGI 353
Query: 254 ELGRRVHVYLLKA--GLRENLHVVNALLDLYAKCGSIREAQQVFGEM 298
E +H +K G+ +L + KCG + EA+Q ++
Sbjct: 354 EEA-FLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDL 399
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 228 bits (582), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 139/423 (32%), Positives = 217/423 (51%), Gaps = 19/423 (4%)
Query: 97 MSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMT-MSCVEPDTHTYPFLLK 155
M A VF I NPN+ +WN++I G +E+ + A+ YR++ MS PD +T+ +
Sbjct: 351 MREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAIS 410
Query: 156 AVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALN 215
A ++ G+ LH K G+E VFV +LL +Y + ESA KVF+ M +R +
Sbjct: 411 ATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVL 470
Query: 216 -----------GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLL 264
G A+ F EM DGF++ S++ AC+++ L G H +
Sbjct: 471 WTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAI 530
Query: 265 KAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXX 324
+ G + V AL+D+Y K G A+ +F ++ W +++ + +G
Sbjct: 531 RTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALS 590
Query: 325 XXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLL 384
P +T++ +L ACSH G +G + +MKE+ GI +HY CMV+L+
Sbjct: 591 FFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQ-GIKAGFKHYSCMVNLV 649
Query: 385 SRAGLVKQAYEYIQNMPVQPN-AVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDY 443
S+AGLV +A E I+ P N A +WRTLL AC +L +G A +LKL+P+ + +
Sbjct: 650 SKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATH 709
Query: 444 VLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYE-FTMGDRSHP----Q 498
+LLSNLYA RW DV +R+ + K PG S +E+ N + F+ GD+S+P Q
Sbjct: 710 ILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPEVVSQ 769
Query: 499 SQD 501
+QD
Sbjct: 770 AQD 772
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 154/295 (52%), Gaps = 17/295 (5%)
Query: 41 PLPHVLTKCISLLQYCASSK--HKLKQIHAFSIRHGV--PLHNPDMGKHLIFTIVSLSAP 96
PL + + + L + C S + +QIHA + G +P +LI V +
Sbjct: 89 PLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGS- 147
Query: 97 MSYAHLVFTMIRNPNVFTWNTMIRGYAESQD-PKPALHFYRQMTMSCVEPDTHTYPFLLK 155
+ A VF + + NV ++N + Y+ + D A M V+P++ T+ L++
Sbjct: 148 LEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQ 207
Query: 156 AVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFAL- 214
+ +V G +L+S IK G+ V V+ S+L +Y++CGD ESA ++F+ + +R A+
Sbjct: 208 VCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVA 267
Query: 215 ----------NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLL 264
N + + L FR M +GV+P FT +L+ C++LG+ LG+ +H ++
Sbjct: 268 WNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARII 327
Query: 265 KAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFG 319
+ +L + NALLD+Y CG +REA VFG + N+VSW ++I G + NGFG
Sbjct: 328 VSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFG 382
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 23/189 (12%)
Query: 183 FVRNSLLHIYAACGDTESAHKVFESMTDR-----FALNGRPNEALTLFREMSANGVEPDG 237
+ N+L+ +Y C E A KVF+ M R F L+ E +++ + + ++
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSA-VFEYVSMGSSLHSQIIKLGS 81
Query: 238 F-------------TVVSLLSACAELGALELGRRVHVYLLKAG---LRENLHVVNALLDL 281
F +VV L C + L+ R++H +L AG E+ + N L+ +
Sbjct: 82 FQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISM 141
Query: 282 YAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVN-GFGXXXXXXXXXXXXQKLAPGEIT 340
Y +CGS+ +A++VF +M RNVVS+ L + N F + + P T
Sbjct: 142 YVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSST 201
Query: 341 FVGVLYACS 349
F ++ C+
Sbjct: 202 FTSLVQVCA 210
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 228 bits (581), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 139/443 (31%), Positives = 225/443 (50%), Gaps = 24/443 (5%)
Query: 56 CASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTW 115
CA+ H Q+H +I+ G + + + T+ S AH VF + ++ TW
Sbjct: 303 CAAMGH---QVHGLAIKTGYEKYT--LVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTW 357
Query: 116 NTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIK 175
NTMI Y +++ K A+ Y++M + V+PD T+ LL + SL++ E + + IK
Sbjct: 358 NTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLL---ATSLDLDVLEMVQACIIK 414
Query: 176 NGFESLVFVRNSLLHIYAACGDTESAHKVFE-----------SMTDRFALNGRPNEALTL 224
G S + + N+L+ Y+ G E A +FE ++ F NG P E L
Sbjct: 415 FGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLER 474
Query: 225 FREMSANGVE--PDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLY 282
F + + V PD +T+ +LLS C +L LG + H Y+L+ G + + NAL+++Y
Sbjct: 475 FSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMY 534
Query: 283 AKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQ-KLAPGEITF 341
++CG+I+ + +VF +M E++VVSW +LI + +G G + K+ P TF
Sbjct: 535 SQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATF 594
Query: 342 VGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEY--IQN 399
VL ACSH G+++EG + F M E +G+ ++H+ C+VDLL RAG + +A I
Sbjct: 595 SAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISE 654
Query: 400 MPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDV 459
+ +W L AC HG L LG++ L++ E YV LSN+YA W +
Sbjct: 655 KTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEA 714
Query: 460 QTIRKSMLQDGVKKTPGYSLVEL 482
+ R+++ G K G S + L
Sbjct: 715 EETRRAINMIGAMKQRGCSWMRL 737
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 150/336 (44%), Gaps = 30/336 (8%)
Query: 95 APMSYAHLVF-TMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFL 153
+ YA VF M +V WN MI G ES + ++ +R+M V D + +
Sbjct: 137 GDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATI 196
Query: 154 LKAVS-KSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE----SM 208
L SL+ G+ +HS+ IK GF V N+L+ +Y C A VFE ++
Sbjct: 197 LSMCDYGSLDF--GKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAV 254
Query: 209 TDRFALN--------GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVH 260
D+ N + +E+L +FR+M + P T VS++ +C+ +G +VH
Sbjct: 255 RDQVTFNVVIDGLAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCS---CAAMGHQVH 311
Query: 261 VYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGX 320
+K G + V NA + +Y+ A +VF +EE+++V+W T+I G
Sbjct: 312 GLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGK 371
Query: 321 XXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKE---EYGIAPRIEHY 377
+ P E TF G L A S LD D ++ ++G++ +IE
Sbjct: 372 SAMSVYKRMHIIGVKPDEFTF-GSLLATS----LD--LDVLEMVQACIIKFGLSSKIEIS 424
Query: 378 GCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLL 413
++ S+ G +++A + + ++ N + W ++
Sbjct: 425 NALISAYSKNGQIEKA-DLLFERSLRKNLISWNAII 459
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 98/200 (49%), Gaps = 22/200 (11%)
Query: 173 TIKNGFESL----VFVRNSLLHIYAACGDTESAHKVFESMTDRFAL------------NG 216
++K F+ + V+ +LL GD E A +VF+ M +R + +G
Sbjct: 110 SLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESG 169
Query: 217 RPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVN 276
++ LFREM GV D F ++LS C + G+L+ G++VH ++KAG VVN
Sbjct: 170 YHETSVELFREMHKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVN 228
Query: 277 ALLDLYAKCGSIREAQQVFGEME--ERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQ-K 333
AL+ +Y C + +A VF E + R+ V++ +I GLA GF +
Sbjct: 229 ALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA--GFKRDESLLVFRKMLEAS 286
Query: 334 LAPGEITFVGVLYACSHCGM 353
L P ++TFV V+ +CS M
Sbjct: 287 LRPTDLTFVSVMGSCSCAAM 306
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 10/123 (8%)
Query: 198 TESAHKVFESMTDRFALN---------GRPNEALTLFREM-SANGVEPDGFTVVSLLSAC 247
TES + E+ T LN G AL LF ++ + PD ++V ++
Sbjct: 8 TESLSAIAENSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTA 67
Query: 248 AELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWT 307
L G +VH Y +++GL + HV N LL LY + G++ ++ F E++E +V SWT
Sbjct: 68 RHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWT 127
Query: 308 TLI 310
TL+
Sbjct: 128 TLL 130
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/413 (31%), Positives = 209/413 (50%), Gaps = 45/413 (10%)
Query: 111 NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEP-DTHTYPFLLKAVSKSLNVREGEAL 169
+ + + YA + + AL+ + QM S P D H + LK+ + + G ++
Sbjct: 11 KLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSV 70
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFA---------------- 213
H+ ++K+ F S FV +LL +Y C A K+F+ + R A
Sbjct: 71 HAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKV 130
Query: 214 ---------LNGRPNE-------------------ALTLFREMSANGVEPDGFTVVSLLS 245
++ PNE A+ +R+M +P+ T+++L+S
Sbjct: 131 KEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVS 190
Query: 246 ACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVS 305
AC+ +GA L + +H Y + + + + + L++ Y +CGSI Q VF ME+R+VV+
Sbjct: 191 ACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVA 250
Query: 306 WTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMK 365
W++LI A++G K+ P +I F+ VL ACSH G+ DE YF+RM+
Sbjct: 251 WSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQ 310
Query: 366 EEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLG 425
+YG+ +HY C+VD+LSR G ++AY+ IQ MP +P A W LLGAC +G + L
Sbjct: 311 GDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELA 370
Query: 426 EIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYS 478
EIA LL +EP++ +YVLL +Y S R + + +R M + GVK +PG S
Sbjct: 371 EIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 20/218 (9%)
Query: 110 PNVFTWNTMIRGYAESQDPK-PALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
PN ++N +I+G ++D A+ FYR+M +P+ T L+ A S R +
Sbjct: 144 PNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKE 203
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGR 217
+HS +N E +++ L+ Y CG VF+SM DR +AL+G
Sbjct: 204 IHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGD 263
Query: 218 PNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKA----GLRENLH 273
AL F+EM V PD +++L AC+ G L VY + GLR +
Sbjct: 264 AESALKTFQEMELAKVTPDDIAFLNVLKACSHAG---LADEALVYFKRMQGDYGLRASKD 320
Query: 274 VVNALLDLYAKCGSIREAQQVFGEMEER-NVVSWTTLI 310
+ L+D+ ++ G EA +V M E+ +W L+
Sbjct: 321 HYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALL 358
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 116/266 (43%), Gaps = 34/266 (12%)
Query: 43 PHVLTKCISLLQYCAS--SKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYA 100
P+++T ++L+ C++ + +K+IH+++ R+ + H P + L+ + Y
Sbjct: 180 PNLIT-LLALVSACSAIGAFRLIKEIHSYAFRNLIEPH-PQLKSGLV-EAYGRCGSIVYV 236
Query: 101 HLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKS 160
LVF + + +V W+++I YA D + AL +++M ++ V PD + +LKA S +
Sbjct: 237 QLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHA 296
Query: 161 LNVREGEALHSVTIKNGFESLVFVRN---SLLHIYAACGDTESAHKVFESMTDRFALNGR 217
EAL G L ++ L+ + + G E A+KV ++M ++
Sbjct: 297 --GLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEK------ 348
Query: 218 PNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNA 277
P T +LL AC G +EL LL EN
Sbjct: 349 -----------------PTAKTWGALLGACRNYGEIELAEIAARELLMVE-PENPANYVL 390
Query: 278 LLDLYAKCGSIREAQQVFGEMEERNV 303
L +Y G EA+++ +M+E V
Sbjct: 391 LGKIYMSVGRQEEAERLRLKMKESGV 416
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 224/432 (51%), Gaps = 22/432 (5%)
Query: 64 KQIHAFSIRHGVPLH----NPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNP-NVFTWNTM 118
K H F IRH L N + + F ++S+ A +F I N WNTM
Sbjct: 351 KAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSV------AEKLFCRISEEGNKEAWNTM 404
Query: 119 IRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGF 178
++GY + + + +R++ +E D+ + ++ + S V G++LH +K
Sbjct: 405 LKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSL 464
Query: 179 ESLVFVRNSLLHIYAACGDTESAHKVF-ESMTDRFALNG---------RPNEALTLFREM 228
+ + V NSL+ +Y GD A ++F E+ T+ N + +A+ LF M
Sbjct: 465 DLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNVITWNAMIASYVHCEQSEKAIALFDRM 524
Query: 229 SANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSI 288
+ +P T+V+LL AC G+LE G+ +H Y+ + NL + AL+D+YAKCG +
Sbjct: 525 VSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHL 584
Query: 289 REAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYAC 348
+++++F +++ V W +I G ++G + P TF+ +L AC
Sbjct: 585 EKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSAC 644
Query: 349 SHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVI 408
+H G++++G F +M +Y + P ++HY C+VDLLSR+G +++A + +MP P+ VI
Sbjct: 645 THAGLVEQGKKLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVI 703
Query: 409 WRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQ 468
W TLL +C HG +G + +P++ G Y++L+N+Y++ +W + + R+ M +
Sbjct: 704 WGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRE 763
Query: 469 DGVKKTPGYSLV 480
GV K G+S+V
Sbjct: 764 SGVGKRAGHSVV 775
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 173/369 (46%), Gaps = 17/369 (4%)
Query: 66 IHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAES 125
+H F++++G L + + +F+ S S S A+L F + + ++F+W ++I A S
Sbjct: 252 LHGFAVKNG--LASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARS 309
Query: 126 QDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVR 185
D + + + +M + PD L+ + K + V +G+A H I++ F V
Sbjct: 310 GDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVC 369
Query: 186 NSLLHIYAA-----------CGDTESAHK-VFESMTDRFALNGRPNEALTLFREMSANGV 233
NSLL +Y C +E +K + +M + + + LFR++ G+
Sbjct: 370 NSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGI 429
Query: 234 EPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQ 293
E D + S++S+C+ +GA+ LG+ +H Y++K L + VVN+L+DLY K G + A +
Sbjct: 430 EIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWR 489
Query: 294 VFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGM 353
+F E + NV++W +I + P IT V +L AC + G
Sbjct: 490 MFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGS 548
Query: 354 LDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLL 413
L+ G R E + ++D+ ++ G ++++ E + Q +AV W ++
Sbjct: 549 LERG-QMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELF-DAGNQKDAVCWNVMI 606
Query: 414 GACTIHGHL 422
+HG +
Sbjct: 607 SGYGMHGDV 615
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 134/274 (48%), Gaps = 17/274 (6%)
Query: 59 SKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTM 118
S L++ +A I G+ N + LI + S P + + VF ++ ++F WN++
Sbjct: 39 SLESLRKHNALIITGGLS-ENIFVASKLISSYASYGKP-NLSSRVFHLVTRRDIFLWNSI 96
Query: 119 IRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIK-NG 177
I+ + + D +L F+ M +S PD T P ++ A ++ L G +H + +K G
Sbjct: 97 IKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGG 156
Query: 178 FESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFAL-----------NGRPNEALTLFR 226
F+ V S ++ Y+ CG + A VF+ M DR + NG L
Sbjct: 157 FDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLC 216
Query: 227 EMSANGVE---PDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYA 283
+M + G + P+ T+ AC+ LGAL+ GR +H + +K GL + V +++ Y+
Sbjct: 217 KMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYS 276
Query: 284 KCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNG 317
K G+ EA F E+ + ++ SWT++I LA +G
Sbjct: 277 KSGNPSEAYLSFRELGDEDMFSWTSIIASLARSG 310
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 119/281 (42%), Gaps = 21/281 (7%)
Query: 159 KSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFAL---- 214
+SL++ +++ I G +FV + L+ YA+ G + +VF +T R
Sbjct: 36 QSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNS 95
Query: 215 -------NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLK-A 266
NG +L F M +G PD FT ++SACAEL +G VH +LK
Sbjct: 96 IIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHG 155
Query: 267 GLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVN-----GFGXX 321
G N V + + Y+KCG +++A VF EM +R+VV+WT +I G N G G
Sbjct: 156 GFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYL 215
Query: 322 XXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMV 381
K P T ACS+ G L EG + G+A M
Sbjct: 216 CKMHSAGSDVDK--PNPRTLECGFQACSNLGALKEG-RCLHGFAVKNGLASSKFVQSSMF 272
Query: 382 DLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHL 422
S++G +AY + + + W +++ + G +
Sbjct: 273 SFYSKSGNPSEAYLSFRELG-DEDMFSWTSIIASLARSGDM 312
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/446 (30%), Positives = 223/446 (50%), Gaps = 20/446 (4%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
+ +H FSIR G L + + LI + S + A VF N+ +WN+++ G+
Sbjct: 246 RSVHGFSIRRGFDLADVFVCNSLI-DMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFV 304
Query: 124 ESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVF 183
+Q AL + M VE D T LL+ +++H V I+ G+ES
Sbjct: 305 HNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEV 364
Query: 184 VRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMSANG 232
+SL+ Y +C + A V +SMT + A GR +EA+++F M
Sbjct: 365 ALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT- 423
Query: 233 VEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLREN-LHVVNALLDLYAKCGSIREA 291
P+ TV+SLL+AC+ L + H ++ L N + V +++D YAKCG+I A
Sbjct: 424 --PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMA 481
Query: 292 QQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHC 351
++ F ++ E+N++SWT +I A+NG + P +T++ L AC+H
Sbjct: 482 RRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHG 541
Query: 352 GMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMP--VQPNAVIW 409
G++ +G F+ M EE P ++HY C+VD+LSRAG + A E I+N+P V+ A W
Sbjct: 542 GLVKKGLMIFKSMVEE-DHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAW 600
Query: 410 RTLLGAC-TIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQ 468
+L C L + + +L+LEP S Y+L S+ +A+E+ W DV +R+ + +
Sbjct: 601 GAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKE 660
Query: 469 DGVKKTPGYSLVELGNRVYEFTMGDR 494
V+ GYS+V GN F GD+
Sbjct: 661 RKVRVVAGYSMVREGNLAKRFLAGDK 686
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 178/389 (45%), Gaps = 34/389 (8%)
Query: 52 LLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPN 111
++ C S ++IH + IR G ++ I + + S +S A +F + +
Sbjct: 133 VIHACRSLWFDGEKIHGYVIRSG--FCGISSVQNSILCMYADSDSLS-ARKLFDEMSERD 189
Query: 112 VFTWNTMIRGYAESQDPKPALHFYRQMTMSC-VEPDTHTYPFLLKAVSKSLNVREGEALH 170
V +W+ +IR Y +S++P L +++M EPD T +LKA + ++ G ++H
Sbjct: 190 VISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVH 249
Query: 171 SVTIKNGFE-SLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRP 218
+I+ GF+ + VFV NSL+ +Y+ D +SA +VF+ T R F N R
Sbjct: 250 GFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRY 309
Query: 219 NEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNAL 278
+EAL +F M VE D TVVSLL C + +H +++ G N +++L
Sbjct: 310 DEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSL 369
Query: 279 LDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGE 338
+D Y C + +A V M ++VVS +T+I GLA G + P
Sbjct: 370 IDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAG---RSDEAISIFCHMRDTPNA 426
Query: 339 ITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPR-------IEHYGCMVDLLSRAGLVK 391
IT + +L ACS L R K +GIA R I +VD ++ G ++
Sbjct: 427 ITVISLLNACSVSADL-------RTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIE 479
Query: 392 QAYEYIQNMPVQPNAVIWRTLLGACTIHG 420
A + + N + W ++ A I+G
Sbjct: 480 MARRTFDQIT-EKNIISWTVIISAYAING 507
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 167/368 (45%), Gaps = 46/368 (12%)
Query: 104 FTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNV 163
F + + + +WN ++ G + + L ++ ++ + EP+T T ++ A +SL
Sbjct: 84 FDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHAC-RSLWF 142
Query: 164 REGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------F 212
+GE +H I++GF + V+NS+L +YA D+ SA K+F+ M++R +
Sbjct: 143 -DGEKIHGYVIRSGFCGISSVQNSILCMYAD-SDSLSARKLFDEMSERDVISWSVVIRSY 200
Query: 213 ALNGRPNEALTLFREMSANG-VEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLR-E 270
+ P L LF+EM EPD TV S+L AC + +++GR VH + ++ G
Sbjct: 201 VQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLA 260
Query: 271 NLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXX 330
++ V N+L+D+Y+K + A +VF E RN+VSW +++ G N
Sbjct: 261 DVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMV 320
Query: 331 XQKLAPGEITFVGVLYACS-----------HCGMLDEGFD----YFRRMKEEYGIAPRIE 375
+ + E+T V +L C H ++ G++ + + Y ++
Sbjct: 321 QEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVD 380
Query: 376 HYGCMVDL---------------LSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHG 420
G ++D L+ AG +A +M PNA+ +LL AC++
Sbjct: 381 DAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSA 440
Query: 421 HLSLGEIA 428
L + A
Sbjct: 441 DLRTSKWA 448
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 129/281 (45%), Gaps = 24/281 (8%)
Query: 50 ISLLQYCASSKHKL--KQIHAFSIRHGVPLHNPDMGKHL-IFTIVSLSAPMSYAHLVFTM 106
+SLL+ C + L K IH IR G + + + +T SL + A V
Sbjct: 332 VSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSL---VDDAGTVLDS 388
Query: 107 IRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREG 166
+ +V + +TMI G A + A+ + M + P+ T LL A S S ++R
Sbjct: 389 MTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADLRTS 445
Query: 167 EALHSVTIKNGFE-SLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FAL 214
+ H + I+ + + V S++ YA CG E A + F+ +T++ +A+
Sbjct: 446 KWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAI 505
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
NG P++AL LF EM G P+ T ++ LSAC G ++ G + +++ + +L
Sbjct: 506 NGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQH 565
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEER---NVVSWTTLIVG 312
+ ++D+ ++ G I A ++ + E +W ++ G
Sbjct: 566 YSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSG 606
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 145/362 (40%), Gaps = 88/362 (24%)
Query: 82 MGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMS 141
MG HL + +LS+ + A + W ++ GY+E Q + + F
Sbjct: 1 MGSHLCSKLQALSSKIKQASVSGK---------WREVVSGYSEIQ--RAGVQF------- 42
Query: 142 CVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESA 201
D +P + KA +K S +F NS+ Y CGD S
Sbjct: 43 ---NDPFVFPIVFKACAKL-------------------SWLFQGNSIADFYMKCGDLCSG 80
Query: 202 HKVFESMTDRFALN-----------GRPNEALTLFREMSANGVEPDGFTVVSLLSACAEL 250
+ F+ M R +++ G E L F ++ G EP+ T+V ++ AC L
Sbjct: 81 LREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSL 140
Query: 251 GALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLI 310
G ++H Y++++G V N++L +YA S+ A+++F EM ER+V+SW+ +I
Sbjct: 141 WF--DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSERDVISWSVVI 197
Query: 311 ----------VGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDY 360
VGL + K P +T VL AC+ +D G
Sbjct: 198 RSYVQSKEPVVGLKL---------FKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVG--- 245
Query: 361 FRRMKEEYGIAPR-----IEHYGC--MVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLL 413
+ +G + R + + C ++D+ S+ V A+ + N V W ++L
Sbjct: 246 ----RSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCR-NIVSWNSIL 300
Query: 414 GA 415
Sbjct: 301 AG 302
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/504 (27%), Positives = 239/504 (47%), Gaps = 47/504 (9%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
+Q+H F IR G + +G +I T + + A VF + +V +WN+MI GY+
Sbjct: 152 RQVHGFVIRGGFD-SDVFVGNGMI-TYYTKCDNIESARKVFDEMSERDVVSWNSMISGYS 209
Query: 124 ESQDPKPALHFYRQMTMSCVE--PDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESL 181
+S + Y+ M ++C + P+ T + +A +S ++ G +H I+N +
Sbjct: 210 QSGSFEDCKKMYKAM-LACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMD 268
Query: 182 VFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMSA 230
+ + N+++ YA CG + A +F+ M+++ + +G EA+ LF EM +
Sbjct: 269 LSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMES 328
Query: 231 NGVE-------------------------------PDGFTVVSLLSACAELGALELGRRV 259
G+ P+ T+ SLL + L+ G+ +
Sbjct: 329 IGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEI 388
Query: 260 HVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFG 319
H + ++ G N++V +++D YAK G + AQ+VF ++R++++WT +I AV+G
Sbjct: 389 HAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDS 448
Query: 320 XXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGC 379
P ++T VL A +H G D F M +Y I P +EHY C
Sbjct: 449 DSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYAC 508
Query: 380 MVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKH 439
MV +LSRAG + A E+I MP+ P A +W LL ++ G L + A L ++EP++
Sbjct: 509 MVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPEN 568
Query: 440 SGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQS 499
+G+Y +++NLY RW + + +R M + G+KK PG S +E + F D S +S
Sbjct: 569 TGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERS 628
Query: 500 QDVYAXXXXXXXXXXXXGYVPRTE 523
+++Y Y+ + E
Sbjct: 629 KEMYEIIEGLVESMSDKEYIRKQE 652
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 131/310 (42%), Gaps = 30/310 (9%)
Query: 118 MIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALH---SVTI 174
+I+ + + P L + ++ + ++PD L+ ++ R+ ALH +T+
Sbjct: 28 LIQHFTRHRLPLHVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQ--ALHVFDEITV 85
Query: 175 KNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMSANGVE 234
+N F N+LL Y S F++ + + G S++
Sbjct: 86 RNAFS-----YNALLIAYT------SREMYFDAFSLFLSWIGSSC--------YSSDAAR 126
Query: 235 PDGFT---VVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREA 291
PD + V+ LS C + L R+VH ++++ G ++ V N ++ Y KC +I A
Sbjct: 127 PDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESA 186
Query: 292 QQVFGEMEERNVVSWTTLIVGLAVNG-FGXXXXXXXXXXXXQKLAPGEITFVGVLYACSH 350
++VF EM ER+VVSW ++I G + +G F P +T + V AC
Sbjct: 187 RKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQ 246
Query: 351 CGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWR 410
L G + ++M E + I + ++ ++ G + A M + ++V +
Sbjct: 247 SSDLIFGLEVHKKMIENH-IQMDLSLCNAVIGFYAKCGSLDYARALFDEMS-EKDSVTYG 304
Query: 411 TLLGACTIHG 420
++ HG
Sbjct: 305 AIISGYMAHG 314
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 139/477 (29%), Positives = 237/477 (49%), Gaps = 55/477 (11%)
Query: 76 PLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFY 135
P P++ KH+ ++ AH VF I +V + +I + + A +
Sbjct: 28 PNSIPELVKHIDSDLIR------NAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAF 81
Query: 136 RQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAA- 194
+++ + P+ T+ ++ + + S +V+ G+ LH +K G S VFV +++L+ Y
Sbjct: 82 KRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKL 141
Query: 195 --------CGDT----------------------ESAHKVFESMTDR-----------FA 213
C D E A +F +M +R F+
Sbjct: 142 STLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFS 201
Query: 214 LNGRPNEALTLFREMSANGVE-PDGFTVVSLLSACAELGALELGRRVHVYLLK-AGLREN 271
GR EA+ F +M GV P+ T ++A + + + G+ +H +K G R N
Sbjct: 202 QTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFN 261
Query: 272 LHVVNALLDLYAKCGSIREAQQVFGEMEE--RNVVSWTTLIVGLAVNGFGXXXXXXXXXX 329
+ V N+L+ Y+KCG++ ++ F ++EE RN+VSW ++I G A NG G
Sbjct: 262 VFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKM 321
Query: 330 XXQ-KLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAP--RIEHYGCMVDLLSR 386
L P +T +GVL+AC+H G++ EG+ YF + +Y +EHY CMVD+LSR
Sbjct: 322 VKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSR 381
Query: 387 AGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLL 446
+G K+A E I++MP+ P W+ LLG C IH + L ++A S +L+L+P+ YV+L
Sbjct: 382 SGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVML 441
Query: 447 SNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVY 503
SN Y++ W +V IR+ M + G+K+ G S +E+ +++ F D+++ +VY
Sbjct: 442 SNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVY 498
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 208/411 (50%), Gaps = 12/411 (2%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
++ V I N +V W MI G + AL + +M S + + ++ + ++
Sbjct: 299 SYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQ 358
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-------- 211
+ G ++H +++G+ NSL+ +YA CG + + +FE M +R
Sbjct: 359 LGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAI 418
Query: 212 ---FALNGRPNEALTLFREMSANGVEP-DGFTVVSLLSACAELGALELGRRVHVYLLKAG 267
+A N +AL LF EM V+ D FTVVSLL AC+ GAL +G+ +H ++++
Sbjct: 419 ISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF 478
Query: 268 LRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXX 327
+R V AL+D+Y+KCG + AQ+ F + ++VVSW LI G +G G
Sbjct: 479 IRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYS 538
Query: 328 XXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRA 387
+ P + F+ VL +CSH GM+ +G F M ++G+ P EH C+VDLL RA
Sbjct: 539 EFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRA 598
Query: 388 GLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLS 447
++ A+++ + +P+ + +L AC +G + +I +++L+P +G YV L
Sbjct: 599 KRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLG 658
Query: 448 NLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQ 498
+ +A+ +RW DV M G+KK PG+S +E+ + F M SH
Sbjct: 659 HSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHSD 709
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 163/362 (45%), Gaps = 47/362 (12%)
Query: 106 MIRNPNVFT----WNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSL 161
MIR +V +N+ I + D K L + M + + PDT T+P LLKA +
Sbjct: 1 MIRTSSVLNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQ 60
Query: 162 NVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------- 211
+ G ++H + NGF S ++ +SL+++YA G A KVFE M +R
Sbjct: 61 RLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIG 120
Query: 212 -FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRE 270
++ G EA +L EM G++P T++ +LS E+ L+ +H + + G
Sbjct: 121 CYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQC---LHDFAVIYGFDC 177
Query: 271 NLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXX 330
++ V+N++L+LY KC + +A+ +F +ME+R++VSW T+I G A G
Sbjct: 178 DIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMR 237
Query: 331 XQKLAPGEITFVGVLYACS-----------HCGMLDEGFDYFRRMKEEYGIAPRIEHYGC 379
L P + TF L HC ++ GFD +K
Sbjct: 238 GDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTA------------ 285
Query: 380 MVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKH 439
++ + + G + +Y ++ +P + V W + I G + LG ++ ++ E
Sbjct: 286 LITMYLKCGKEEASYRVLETIP-NKDVVCWTVM-----ISGLMRLGRAEKALIVFSEMLQ 339
Query: 440 SG 441
SG
Sbjct: 340 SG 341
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 175/428 (40%), Gaps = 60/428 (14%)
Query: 51 SLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAP---MSYAHLVFTMI 107
SLL+ CAS + + SI V ++ ++ ++V+L A +++A VF +
Sbjct: 51 SLLKACASLQ---RLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEM 107
Query: 108 RNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGE 167
R +V W MI Y+ + A +M ++P T LL+ +S L + + +
Sbjct: 108 RERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVT---LLEMLSGVLEITQLQ 164
Query: 168 ALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNG 216
LH + GF+ + V NS+L++Y C A +F+ M R +A G
Sbjct: 165 CLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVG 224
Query: 217 RPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVN 276
+E L L M +G+ PD T + LS + LE+GR +H ++K G ++H+
Sbjct: 225 NMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKT 284
Query: 277 ALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAP 336
AL+ +Y KCG + +V + ++VV WT +I GL G
Sbjct: 285 ALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDL 344
Query: 337 GEITFVGVLYACSH-----------------------------------CGMLDEGFDYF 361
V+ +C+ CG LD+ F
Sbjct: 345 SSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIF 404
Query: 362 RRMKEEYGIA--PRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIH 419
RM E ++ I Y VD L +A L+ + ++ V V+ +LL AC+
Sbjct: 405 ERMNERDLVSWNAIISGYAQNVD-LCKALLLFEEMKFKTVQQVDSFTVV--SLLQACSSA 461
Query: 420 GHLSLGEI 427
G L +G++
Sbjct: 462 GALPVGKL 469
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 110/240 (45%), Gaps = 12/240 (5%)
Query: 203 KVFESMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVY 262
K F S + + +G + L+ F M AN + PD FT SLL ACA L L G +H
Sbjct: 12 KYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQ 71
Query: 263 LLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXX 322
+L G + ++ ++L++LYAK G + A++VF EM ER+VV WT +I + G
Sbjct: 72 VLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEA 131
Query: 323 XXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVD 382
Q + PG +T + +L L D+ YG I M++
Sbjct: 132 CSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDF----AVIYGFDCDIAVMNSMLN 187
Query: 383 LLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGD 442
L + V A + M Q + V W T+ I G+ S+G + S +LKL + GD
Sbjct: 188 LYCKCDHVGDAKDLFDQME-QRDMVSWNTM-----ISGYASVGNM--SEILKLLYRMRGD 239
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 125/245 (51%), Gaps = 15/245 (6%)
Query: 66 IHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAES 125
+H + +RHG L P + + T+ + + + ++F + ++ +WN +I GYA++
Sbjct: 368 VHGYVLRHGYTLDTPALNS--LITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQN 425
Query: 126 QDPKPALHFYRQMTMSCVEP-DTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFV 184
D AL + +M V+ D+ T LL+A S + + G+ +H + I++ V
Sbjct: 426 VDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLV 485
Query: 185 RNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMSANGV 233
+L+ +Y+ CG E+A + F+S++ + + +G+ + AL ++ E +G+
Sbjct: 486 DTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGM 545
Query: 234 EPDGFTVVSLLSACAELGALELGRRVHVYLLKA-GLRENLHVVNALLDLYAKCGSIREAQ 292
EP+ +++LS+C+ G ++ G ++ +++ G+ N + ++DL + I +A
Sbjct: 546 EPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAF 605
Query: 293 QVFGE 297
+ + E
Sbjct: 606 KFYKE 610
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 205/421 (48%), Gaps = 43/421 (10%)
Query: 103 VFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLN 162
+F N V WN+MI GY + AL + +M E D+ T ++ A
Sbjct: 275 LFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETRE-DSRTLAAVINACIGLGF 333
Query: 163 VREGEALHSVTIKNGFESLVFVR-------------------------------NSLLHI 191
+ G+ +H K G + V NS++ +
Sbjct: 334 LETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKV 393
Query: 192 YAACGDTESAHKVFE-----------SMTDRFALNGRPNEALTLFREMSANGVEPDGFTV 240
Y +CG + A +VFE SMT+ F+ NG E L F +M + D ++
Sbjct: 394 YFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSL 453
Query: 241 VSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEE 300
S++SACA + +LELG +V GL + V ++L+DLY KCG + ++VF M +
Sbjct: 454 SSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVK 513
Query: 301 RNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDY 360
+ V W ++I G A NG G + P +ITF+ VL AC++CG+++EG
Sbjct: 514 SDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKL 573
Query: 361 FRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHG 420
F MK ++G P EH+ CMVDLL+RAG V++A ++ MP + +W ++L C +G
Sbjct: 574 FESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANG 633
Query: 421 HLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLV 480
+ ++G+ A +++LEP++S YV LS ++A+ W +RK M ++ V K PG S
Sbjct: 634 YKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWT 693
Query: 481 E 481
+
Sbjct: 694 D 694
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 163/401 (40%), Gaps = 79/401 (19%)
Query: 94 SAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFL 153
+ +S A +F + +V T N+++ GY + + AL ++++ S D T +
Sbjct: 137 AGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFS---ADAITLTTV 193
Query: 154 LKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE------- 206
LKA ++ ++ G+ +H+ + G E + +SL+++YA CGD A + E
Sbjct: 194 LKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDD 253
Query: 207 -----------------------------------SMTDRFALNGRPNEALTLFREMSAN 231
SM + N EAL LF EM N
Sbjct: 254 HSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR-N 312
Query: 232 GVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGS---- 287
D T+ ++++AC LG LE G+++H + K GL +++ V + LLD+Y+KCGS
Sbjct: 313 ETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEA 372
Query: 288 ---------------------------IREAQQVFGEMEERNVVSWTTLIVGLAVNGFGX 320
I +A++VF +E ++++SW ++ G + NG
Sbjct: 373 CKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTV 432
Query: 321 XXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCM 380
L E++ V+ AC+ L+ G F R G+ +
Sbjct: 433 ETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFAR-ATIVGLDSDQVVSSSL 491
Query: 381 VDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGH 421
+DL + G V+ M V+ + V W +++ +G
Sbjct: 492 IDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISGYATNGQ 531
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 130/271 (47%), Gaps = 36/271 (13%)
Query: 50 ISLLQYCASSKHK--LKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMI 107
+ LLQ C+S + +Q + ++ G + HL+ + S S M A +F +
Sbjct: 30 VRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLL-QMYSRSGKMGIARNLFDEM 88
Query: 108 RNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGE 167
+ N F+WNTMI GY S + +L F+ M E D +++ ++ +K+ GE
Sbjct: 89 PDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMP----ERDGYSWNVVVSGFAKA-----GE 139
Query: 168 ALHSVTIKNGF-ESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFR 226
+ + N E V NSLLH Y LNG EAL LF+
Sbjct: 140 LSVARRLFNAMPEKDVVTLNSLLHGY--------------------ILNGYAEEALRLFK 179
Query: 227 EMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCG 286
E++ D T+ ++L ACAEL AL+ G+++H +L G+ + + ++L+++YAKCG
Sbjct: 180 ELN---FSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCG 236
Query: 287 SIREAQQVFGEMEERNVVSWTTLIVGLAVNG 317
+R A + ++ E + S + LI G A G
Sbjct: 237 DLRMASYMLEQIREPDDHSLSALISGYANCG 267
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 114/232 (49%), Gaps = 13/232 (5%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A VF I N ++ +WN+M G++++ L ++ QM + D + ++ A +
Sbjct: 403 AKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACAS 462
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE-----------SM 208
++ GE + + G +S V +SL+ +Y CG E +VF+ SM
Sbjct: 463 ISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSM 522
Query: 209 TDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYL-LKAG 267
+A NG+ EA+ LF++MS G+ P T + +L+AC G +E GR++ + + G
Sbjct: 523 ISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHG 582
Query: 268 LRENLHVVNALLDLYAKCGSIREAQQVFGEME-ERNVVSWTTLIVGLAVNGF 318
+ + ++DL A+ G + EA + EM + + W++++ G NG+
Sbjct: 583 FVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGY 634
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 216 bits (549), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 131/434 (30%), Positives = 224/434 (51%), Gaps = 22/434 (5%)
Query: 65 QIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAE 124
QIH S+ G N + + + ++ + M A L F ++ ++ +WN MI GY
Sbjct: 134 QIHG-SVEKGNCAGNL-IVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTA 191
Query: 125 SQDPKPALHFYRQMTMSCVEPDTHTYPFLLKA--VSKSLNVREGEALHSVTIKNGFESLV 182
+ + ++ M +PD T+ LL+A V K L + LH + IK GF
Sbjct: 192 NACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVS--ELHGLAIKLGFGRSS 249
Query: 183 FVRNSLLHIYAACGDTESAHKVFESMTDRFAL------------NGRPNEALTLFREMSA 230
+ SL++ Y CG +A K+ E R L N ++A +F++M
Sbjct: 250 ALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIR 309
Query: 231 NGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAG-LRENLHVVNALLDLYAKCGSIR 289
+ D V S+L C + ++ +GR++H + LK+ +R ++ + N+L+D+YAK G I
Sbjct: 310 MKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIE 369
Query: 290 EAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACS 349
+A F EM+E++V SWT+LI G +G +++ P ++TF+ +L ACS
Sbjct: 370 DAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACS 429
Query: 350 HCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMP--VQPNAV 407
H G + G+ + M ++GI R EH C++D+L+R+G +++AY I++ V ++
Sbjct: 430 HTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSS 489
Query: 408 IWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSML 467
W L AC HG++ L ++A + LL +EP+ +Y+ L+++YA+ W + RK M
Sbjct: 490 TWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMK 549
Query: 468 QDG-VKKTPGYSLV 480
+ G K PGYSLV
Sbjct: 550 ESGSCNKAPGYSLV 563
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 172/399 (43%), Gaps = 18/399 (4%)
Query: 38 PENPL--PHVLTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSA 95
EN L P + K + L Y + K +L IH SI +G N + K ++ +
Sbjct: 5 SENYLLSPSLYLKALKLCSY-QNVKKQLLLIHGNSITNGF-CSNLQL-KDMLIDLYLKQG 61
Query: 96 PMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLK 155
+ +A +F I +V +W MI ++ AL +++M V+ + TY +LK
Sbjct: 62 DVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLK 121
Query: 156 AVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---- 211
+ ++EG +H K + VR++LL +YA CG E A F+SM +R
Sbjct: 122 SCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVS 181
Query: 212 -------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLL 264
+ N + + +LF+ M G +PD FT SLL A + LE+ +H +
Sbjct: 182 WNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAI 241
Query: 265 KAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLA-VNGFGXXXX 323
K G + ++ +L++ Y KCGS+ A ++ ++R+++S T LI G + N
Sbjct: 242 KLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAF 301
Query: 324 XXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDL 383
K E+ +L C+ + G + I + ++D+
Sbjct: 302 DIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDM 361
Query: 384 LSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHL 422
+++G ++ A + M + + W +L+ HG+
Sbjct: 362 YAKSGEIEDAVLAFEEMK-EKDVRSWTSLIAGYGRHGNF 399
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 136/431 (31%), Positives = 223/431 (51%), Gaps = 20/431 (4%)
Query: 66 IHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFT-MIRNPNVFTWNTMIRGYAE 124
+H ++R G + D+ LI + +S A VF M ++ + T++T++ GY +
Sbjct: 147 LHGIALRSGFMVFT-DLRNALIH-FYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQ 204
Query: 125 SQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFV 184
AL +R M S V + T L A+S ++ E+ H + IK G + + +
Sbjct: 205 VSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHL 264
Query: 185 RNSLLHIYAACGDTESAHKVFES-----------MTDRFALNGRPNEALTLFREMSANGV 233
+L+ +Y G SA ++F+ M D++A G E + L R+M +
Sbjct: 265 ITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKM 324
Query: 234 EPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQ 293
+P+ T V LLS+CA A +GR V L + + + + AL+D+YAK G + +A +
Sbjct: 325 KPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVE 384
Query: 294 VFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQ--KLAPGEITFVGVLYACSHC 351
+F M++++V SWT +I G +G + K+ P EITF+ VL ACSH
Sbjct: 385 IFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHG 444
Query: 352 GMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRT 411
G++ EG F+RM E Y P++EHYGC+VDLL RAG +++AYE I+N+P+ ++ WR
Sbjct: 445 GLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRA 504
Query: 412 LLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGV 471
LL AC ++G+ LGE L ++ H D +LL+ +A + + + L G
Sbjct: 505 LLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVA---GNPEKSLDNELNKG- 560
Query: 472 KKTPGYSLVEL 482
+K GYS +E+
Sbjct: 561 RKEAGYSAIEI 571
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 203/436 (46%), Gaps = 62/436 (14%)
Query: 39 ENPLPHVLTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMS 98
E+ L K I+ L+ C + ++ +IH + ++ G+ + + K L F+ V +
Sbjct: 21 ESLLSPQCQKLINDLRSCRDTV-EVSRIHGYMVKTGLDKDDFAVSKLLAFSSV---LDIR 76
Query: 99 YAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVS 158
YA +F + N N+F +NTMIRGY+ S +P+ A + Q+ + D ++ LK+ S
Sbjct: 77 YASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCS 136
Query: 159 KSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESM-------TDR 211
+ L V GE LH + +++GF +RN+L+H Y CG A KVF+ M T
Sbjct: 137 RELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFS 196
Query: 212 FALNG-----RPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKA 266
+NG + AL LFR M + V + T++S LSA ++LG L HV +K
Sbjct: 197 TLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKI 256
Query: 267 GLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXX 326
GL +LH++ AL+ +Y K G I A+++F ++VV+W +I A G
Sbjct: 257 GLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLL 316
Query: 327 XXXXXQKLAPGEITFVGVLYACSH-----------------------------------C 351
+K+ P TFVG+L +C++
Sbjct: 317 RQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKV 376
Query: 352 GMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYI-----QNMPVQPNA 406
G+L++ + F RMK++ ++ + M+ GL ++A +N V+PN
Sbjct: 377 GLLEKAVEIFNRMKDK-----DVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNE 431
Query: 407 VIWRTLLGACTIHGHL 422
+ + +L AC+ HG L
Sbjct: 432 ITFLVVLNACS-HGGL 446
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/405 (31%), Positives = 211/405 (52%), Gaps = 30/405 (7%)
Query: 94 SAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFL 153
S + A VF I + +WN +I YA+ D A + M + ++ L
Sbjct: 183 SGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLK----SPASWNIL 238
Query: 154 LKAVSKSLNVREGEA----LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMT 209
+ +N RE + ++ KNG + + Y GD +SA ++F M+
Sbjct: 239 IGGY---VNCREMKLARTYFDAMPQKNGVSWITMISG-----YTKLGDVQSAEELFRLMS 290
Query: 210 DR-----------FALNGRPNEALTLFREMSANG--VEPDGFTVVSLLSACAELGALELG 256
+ + NG+P +AL LF +M ++PD T+ S++SA ++LG G
Sbjct: 291 KKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFG 350
Query: 257 RRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVN 316
V Y+ + G++ + + +L+DLY K G +A ++F + +++ VS++ +I+G +N
Sbjct: 351 TWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGIN 410
Query: 317 GFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEH 376
G +K+ P +TF G+L A SH G++ EG+ F MK+ + + P +H
Sbjct: 411 GMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPSADH 469
Query: 377 YGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLE 436
YG MVD+L RAG +++AYE I++MP+QPNA +W LL A +H ++ GEIA SH +KLE
Sbjct: 470 YGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLE 529
Query: 437 PKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVE 481
+G L+ +Y+S RW D +T+R S+ + + KT G S VE
Sbjct: 530 TDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 146/368 (39%), Gaps = 54/368 (14%)
Query: 97 MSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKA 156
++Y + + F+W ++R ++ + K + Y M S + P +H +L+A
Sbjct: 54 VTYVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRA 113
Query: 157 VSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR----- 211
K N+ +G+ +H+ +KNG V+V+ L+ +Y+ G E A K F+ + ++
Sbjct: 114 CGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSW 173
Query: 212 ------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLK 265
+ +G +EA +F ++ E D + ++S+ A+ G ++G L
Sbjct: 174 NSLLHGYLESGELDEARRVFDKIP----EKDAVSWNLIISSYAKKG--DMGNACS--LFS 225
Query: 266 AGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXX 325
A ++ N L+ Y C ++ A+ F M ++N VSW T+I G G
Sbjct: 226 AMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEEL 285
Query: 326 XXXXXXQK---------------------------------LAPGEITFVGVLYACSHCG 352
+ + P EIT V+ A S G
Sbjct: 286 FRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLG 345
Query: 353 MLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTL 412
G + E+GI ++DL + G +A++ N+ + + V + +
Sbjct: 346 NTSFG-TWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLN-KKDTVSYSAM 403
Query: 413 LGACTIHG 420
+ C I+G
Sbjct: 404 IMGCGING 411
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 128/446 (28%), Positives = 221/446 (49%), Gaps = 29/446 (6%)
Query: 51 SLLQYCA--SSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIR 108
S+LQ CA ++ K IH ++I+ + + + ++ + S A F +
Sbjct: 406 SVLQGCAGVAASRLGKSIHCYAIK--ADIESELETATAVISMYAKCGRFSPALKAFERLP 463
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
+ +N + +GY + D A Y+ M + V PD+ T +L+ + + G
Sbjct: 464 IKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSC 523
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFES------------MTDRFALNG 216
++ IK+GF+S V ++L++++ C +A +F+ M + + L+G
Sbjct: 524 VYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHG 583
Query: 217 RPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVN 276
+ EA+ FR+M +P+ T V+++ A AEL AL +G VH L++ G V N
Sbjct: 584 QAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGN 643
Query: 277 ALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAP 336
+L+D+YAKCG I +++ F E+ + +VSW T++ A +G +L P
Sbjct: 644 SLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKP 703
Query: 337 GEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEY 396
++F+ VL AC H G+++EG F M E + I +EHY CMVDLL +AGL +A E
Sbjct: 704 DSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEM 763
Query: 397 IQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRW 456
++ M V+ + +W LL + +H +L L A L+KLEP L + Y+ +RR
Sbjct: 764 MRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEP-------LNPSHYSQDRRL 816
Query: 457 TDVQTIRKSMLQDGVKKTPGYSLVEL 482
+V + + +KK P S +E+
Sbjct: 817 GEVNNVSR------IKKVPACSWIEV 836
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 148/289 (51%), Gaps = 21/289 (7%)
Query: 42 LPHVLTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAH 101
+P T + +L+ C + + L Q+H I G+ HN + + +F LS
Sbjct: 1 MPINYTNLLLMLRECKNFRCLL-QVHGSLIVSGLKPHNQLINAYSLFQRQDLS------R 53
Query: 102 LVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTM-SCVEPDTHTYPFLLKAVSKS 160
++F +R+P V WN+MIRGY + + AL F+ M+ ++PD +++ F LKA + S
Sbjct: 54 VIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGS 113
Query: 161 LNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE-----------SMT 209
++ ++G +H + + G ES V++ +L+ +Y D SA +VF+ +M
Sbjct: 114 MDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMV 173
Query: 210 DRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLR 269
A NG + AL LF +M + V+ D ++ +L+ A ++L ++ R +H ++K G
Sbjct: 174 SGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFI 233
Query: 270 ENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGF 318
+ L+D+Y C + A+ VF E+ ++ SW T++ A NGF
Sbjct: 234 --FAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGF 280
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 173/383 (45%), Gaps = 19/383 (4%)
Query: 66 IHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAES 125
IH ++++ G+ + + + L+ ++ S + A +F I + +V +W+ MI Y ++
Sbjct: 322 IHDYAVQQGL-IGDVSVATSLM-SMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQA 379
Query: 126 QDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVR 185
A+ +R M ++P+ T +L+ + R G+++H IK ES +
Sbjct: 380 GQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETA 439
Query: 186 NSLLHIYAACGDTESAHKVFESM--TDRFALN---------GRPNEALTLFREMSANGVE 234
+++ +YA CG A K FE + D A N G N+A +++ M +GV
Sbjct: 440 TAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVC 499
Query: 235 PDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQV 294
PD T+V +L CA G V+ ++K G HV +AL++++ KC ++ A +
Sbjct: 500 PDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVL 559
Query: 295 FGEME-ERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGM 353
F + E++ VSW ++ G ++G +K P +TFV ++ A +
Sbjct: 560 FDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSA 619
Query: 354 LDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLL 413
L G + + G + +VD+ ++ G+++ + + + V W T+L
Sbjct: 620 LRVGMSVHSSLI-QCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEIS-NKYIVSWNTML 677
Query: 414 GACTIHGHLSLGEIARSHLLKLE 436
A HG L A S L ++
Sbjct: 678 SAYAAHG---LASCAVSLFLSMQ 697
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 187/430 (43%), Gaps = 28/430 (6%)
Query: 77 LHNPDMGKHLIFTIVS-------LSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPK 129
LH + K IF S A + A VF + + +W TM+ YA + +
Sbjct: 223 LHGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFE 282
Query: 130 PALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLL 189
L + M V + L+A + ++ +G A+H ++ G V V SL+
Sbjct: 283 EVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLM 342
Query: 190 HIYAACGDTESAHKVFESMTDRFALN-----------GRPNEALTLFREMSANGVEPDGF 238
+Y+ CG+ E A ++F ++ DR ++ G+ +EA++LFR+M ++P+
Sbjct: 343 SMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAV 402
Query: 239 TVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEM 298
T+ S+L CA + A LG+ +H Y +KA + L A++ +YAKCG A + F +
Sbjct: 403 TLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERL 462
Query: 299 EERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEG- 357
++ V++ L G G + P T VG+L C+ C G
Sbjct: 463 PIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGS 522
Query: 358 FDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACT 417
Y + +K + + H ++++ ++ + A + + V W ++
Sbjct: 523 CVYGQIIKHGFDSECHVAH--ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYL 580
Query: 418 IHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQ---TIRKSMLQDG-VKK 473
+HG +A +K+E K + V N+ + + ++ ++ S++Q G +
Sbjct: 581 LHGQAEEA-VATFRQMKVE-KFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQ 638
Query: 474 TP-GYSLVEL 482
TP G SLV++
Sbjct: 639 TPVGNSLVDM 648
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 206/410 (50%), Gaps = 17/410 (4%)
Query: 200 SAHKVFESMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRV 259
S H + + D G+ +A+ + + G D + + C + AL+ + V
Sbjct: 145 SGHSSLDEL-DSICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVV 203
Query: 260 HVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFG 319
H ++ + ++ N+++++Y+ CGS+ +A VF M ERN+ +W +I A NG G
Sbjct: 204 HEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQG 263
Query: 320 XXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGC 379
+ P F + +AC G ++EG +F M +EYGI P +EHY
Sbjct: 264 EDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVS 323
Query: 380 MVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKH 439
+V +L+ G + +A ++++M +PN +W TL+ +HG L LG+ + + +L
Sbjct: 324 LVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQL---- 377
Query: 440 SGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQS 499
D L+ + + K LQ + K P Y + + GD S P++
Sbjct: 378 --DASRLNKESKAGLVPVKSSDLVKEKLQR-MAKGPNYGIRYM-------AAGDISRPEN 427
Query: 500 QDVYAXXXXXXXXXXXXGYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTP 559
+++Y GYVP ++ L D+++E K++ L H+E+ A L+T +
Sbjct: 428 RELYMALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSL 487
Query: 560 IRVMKNLRVCADCHMAIKLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
IRVMKNLRVCADCH A+KL+SK+ RE++ RD RFHH + G CSC++YW
Sbjct: 488 IRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 163 VREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR----------- 211
++E + +H + S + NS++ +Y+ CG E A VF SM +R
Sbjct: 197 LQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRC 256
Query: 212 FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKA-GLRE 270
FA NG+ +A+ F G +PDG + AC LG + G + K G+
Sbjct: 257 FAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIP 316
Query: 271 NLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLI 310
+ +L+ + A+ G + EA + F E E NV W TL+
Sbjct: 317 CMEHYVSLVKMLAEPGYLDEALR-FVESMEPNVDLWETLM 355
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 135/463 (29%), Positives = 214/463 (46%), Gaps = 35/463 (7%)
Query: 40 NPLPHVLTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSY 99
N L + C ++Y S QIH R +PL + + ++ S M
Sbjct: 276 NTLAVMFKACRDFVRYREGS-----QIHGLVSR--MPLEFDLFLGNSLMSMYSKLGYMGE 328
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A VF +++N + +WN++I G + + A + +M D ++ ++K S
Sbjct: 329 AKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMP----GKDMVSWTDMIKGFSG 384
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPN 219
+ + L + E + + +M F NG
Sbjct: 385 KGEISKCVELFGMM------------------------PEKDNITWTAMISAFVSNGYYE 420
Query: 220 EALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALL 279
EAL F +M V P+ +T S+LSA A L L G ++H ++K + +L V N+L+
Sbjct: 421 EALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLV 480
Query: 280 DLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEI 339
+Y KCG+ +A ++F + E N+VS+ T+I G + NGFG P +
Sbjct: 481 SMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGV 540
Query: 340 TFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQN 399
TF+ +L AC H G +D G+ YF+ MK Y I P +HY CMVDLL R+GL+ A I
Sbjct: 541 TFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLIST 600
Query: 400 MPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDV 459
MP +P++ +W +LL A H + L E+A L++LEP + YV+LS LY+ + D
Sbjct: 601 MPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDC 660
Query: 460 QTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDV 502
I +KK PG S + L V+ F GD S +++
Sbjct: 661 DRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEI 703
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 151/370 (40%), Gaps = 36/370 (9%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
K A+ + +P+ +I ++ + A+ +F I N ++ TMI G+
Sbjct: 96 KMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFV 155
Query: 124 ESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVF 183
+ A Y + + D+ LL +R G+ +V + G
Sbjct: 156 RAGRFDEAEFLYAETPVKF--RDSVASNVLLSGY-----LRAGKWNEAVRVFQGMAVKEV 208
Query: 184 VR-NSLLHIYAACGDTESAHKVFESMTDRFALN-----------GRPNEALTLFREMSAN 231
V +S++H Y G A +F+ MT+R + G + LF M
Sbjct: 209 VSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQE 268
Query: 232 G-VEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIRE 290
G V+ + T+ + AC + G ++H + + L +L + N+L+ +Y+K G + E
Sbjct: 269 GDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGE 328
Query: 291 AQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGE--ITFVGVLYAC 348
A+ VFG M+ ++ VSW +LI GL +K+ PG+ +++ ++
Sbjct: 329 AKAVFGVMKNKDSVSWNSLITGLV-----QRKQISEAYELFEKM-PGKDMVSWTDMIKGF 382
Query: 349 SHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNM---PVQPN 405
S G + + + F M E+ I + M+ G ++A + M V PN
Sbjct: 383 SGKGEISKCVELFGMMPEKDNIT-----WTAMISAFVSNGYYEEALCWFHKMLQKEVCPN 437
Query: 406 AVIWRTLLGA 415
+ + ++L A
Sbjct: 438 SYTFSSVLSA 447
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 212 bits (539), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 206/422 (48%), Gaps = 45/422 (10%)
Query: 116 NTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIK 175
N + + Y S PK AL FY + PD++T+ L+ + K+ V G+ H IK
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 176 NGFESLVFVRNSLLHIYAACG-------------------------------DTESAHKV 204
+G + ++ V+NSL+H+Y CG D +AHK+
Sbjct: 147 HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKL 206
Query: 205 FESMTDRFALN-----------GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGAL 253
F+ M D+ ++ P +++LFREM G + + T+V LL+AC L
Sbjct: 207 FDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 254 ELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGL 313
+ GR VH L++ L ++ + AL+D+Y KC + A+++F + RN V+W +I+
Sbjct: 267 KEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAH 326
Query: 314 AVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPR 373
++G L P E+TFVGVL C+ G++ +G Y+ M +E+ I P
Sbjct: 327 CLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPN 386
Query: 374 IEHYGCMVDLLSRAGLVKQAYEYIQNMP---VQPNAVIWRTLLGACTIHGHLSLGEIARS 430
H CM +L S AG ++A E ++N+P V P + W LL + G+ +LGE
Sbjct: 387 FGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAK 446
Query: 431 HLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFT 490
L++ +P + Y LL N+Y+ RW DV +R+ + + + + PG LV+L V+
Sbjct: 447 SLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLR 506
Query: 491 MG 492
+G
Sbjct: 507 LG 508
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 106/227 (46%), Gaps = 16/227 (7%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
AH +F + + N+ +WN MI Y + +P ++ +R+M + + + T LL A +
Sbjct: 203 AHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGR 262
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-------- 211
S ++EG ++H+ I+ S V + +L+ +Y C + A ++F+S++ R
Sbjct: 263 SARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVM 322
Query: 212 ---FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKA-G 267
L+GRP L LF M + PD T V +L CA G + G+ + ++
Sbjct: 323 ILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQ 382
Query: 268 LRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNV----VSWTTLI 310
++ N + +LY+ G EA++ + + +V W L+
Sbjct: 383 IKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLL 429
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 74/129 (57%), Gaps = 4/129 (3%)
Query: 189 LHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACA 248
+ IY + G A+ VF++ + ++ P +AL + ++ G PD +T VSL+S
Sbjct: 74 VSIYRSIGKLYCANPVFKA----YLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIE 129
Query: 249 ELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTT 308
+ ++ G+ H +K G + L V N+L+ +Y CG++ A+++F E+ +R++VSW +
Sbjct: 130 KTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNS 189
Query: 309 LIVGLAVNG 317
+I G+ NG
Sbjct: 190 IIAGMVRNG 198
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/428 (30%), Positives = 220/428 (51%), Gaps = 14/428 (3%)
Query: 63 LKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGY 122
L+ IH +I G+ + I S + + A +F I +P++ WN MI GY
Sbjct: 125 LRCIHGIAIVSGLGFDQ--ICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGY 182
Query: 123 AESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLV 182
++ + M +P+ +T L + + ++H+ +K +S
Sbjct: 183 GCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHS 242
Query: 183 FVRNSLLHIYAACGDTESAHKVFESMTD-----------RFALNGRPNEALTLFREMSAN 231
+V +L+++Y+ C SA VF S+++ ++ G EAL LF E+ +
Sbjct: 243 YVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMS 302
Query: 232 GVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREA 291
G +PD V +L +CAEL G+ VH Y+++ GL ++ V +AL+D+Y+KCG ++ A
Sbjct: 303 GKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCA 362
Query: 292 QQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHC 351
+F + E+N+VS+ +LI+GL ++GF L P EITF +L C H
Sbjct: 363 MSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHS 422
Query: 352 GMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRT 411
G+L++G + F RMK E+GI P+ EHY MV L+ AG +++A+E++ ++ ++ I
Sbjct: 423 GLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGA 482
Query: 412 LLGACTIHGHLSLGEIARSHLLK-LEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDG 470
LL C +H + L E+ ++ K E + S V+LSN+YA RW +V+ +R + +
Sbjct: 483 LLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESY 542
Query: 471 VKKTPGYS 478
K PG S
Sbjct: 543 GGKLPGIS 550
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 165/374 (44%), Gaps = 21/374 (5%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
+++H+F + + +P L +L+ + A +F + +VF WN++IR YA
Sbjct: 25 QKLHSFVTKSKLA-RDPYFATQLA-RFYALNDDLISARKLFDVFPERSVFLWNSIIRAYA 82
Query: 124 ESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVF 183
++ L + Q+ S PD TY L + S+S + + +H + I +G
Sbjct: 83 KAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQI 142
Query: 184 VRNSLLHIYAACGDTESAHKVFESMTD-----------RFALNGRPNEALTLFREMSANG 232
++++ Y+ G A K+F S+ D + G ++ + LF M G
Sbjct: 143 CGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRG 202
Query: 233 VEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQ 292
+P+ +T+V+L S + L + VH + LK L + +V AL+++Y++C I A
Sbjct: 203 HQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASAC 262
Query: 293 QVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCG 352
VF + E ++V+ ++LI G + G P + VL +C+
Sbjct: 263 SVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELS 322
Query: 353 MLDEGFD---YFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIW 409
G + Y R+ G+ I+ ++D+ S+ GL+K A +P + N V +
Sbjct: 323 DSVSGKEVHSYVIRL----GLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP-EKNIVSF 377
Query: 410 RTLLGACTIHGHLS 423
+L+ +HG S
Sbjct: 378 NSLILGLGLHGFAS 391
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 201/393 (51%), Gaps = 20/393 (5%)
Query: 105 TMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLN-- 162
TM ++ +WN++I G A S +L ++ M+ H LL +S S N
Sbjct: 538 TMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSRE--GKIRHDLITLLGTISASGNLG 595
Query: 163 -VREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTD----------- 210
V +G H + IK+ E ++N+L+ +Y C D ESA KVF ++D
Sbjct: 596 LVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVIS 655
Query: 211 RFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRE 270
+ N E LFR + +EP+ T V LLSA +LG+ G + H +L++ G +
Sbjct: 656 ALSQNKAGREVFQLFRNLK---LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQA 712
Query: 271 NLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXX-XXXX 329
N V AL+D+Y+ CG + +VF ++ +W ++I +G G
Sbjct: 713 NPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELS 772
Query: 330 XXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGL 389
++ P + +F+ +L ACSH G +DEG Y+++M+E++G+ P EH +VD+L RAG
Sbjct: 773 SNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGK 832
Query: 390 VKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNL 449
+++AYE+I + A +W LL AC HG LG+ L ++EP ++ Y+ L+N
Sbjct: 833 LREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANT 892
Query: 450 YASERRWTDVQTIRKSMLQDGVKKTPGYSLVEL 482
Y W + +RK + + +KK PGYS++++
Sbjct: 893 YVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 135/237 (56%), Gaps = 15/237 (6%)
Query: 97 MSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKA 156
+S A VFT + + ++ +WNT++ + P+ +L +++ MT S E DT T+ ++ A
Sbjct: 239 LSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISA 298
Query: 157 VSKSLNVREGEALHSVTIKNGF--ESLVFVRNSLLHIYAACGDTESAHKVFESMTDR--- 211
S + GE+LH + IK+G+ E+ V V NS++ +Y+ CGDTE+A VFE + R
Sbjct: 299 CSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVI 358
Query: 212 --------FALNGRPNEALTLFREM-SANGVEPDGFTVVSLLSACAELGALELGRRVHVY 262
FA NG EA + +M S + ++PD TVVS+ S C +L GR VH Y
Sbjct: 359 SSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGY 418
Query: 263 LLKAGLREN-LHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGF 318
++ ++ L V+N+++D+Y KCG +A+ +F R++VSW ++I + NGF
Sbjct: 419 TVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGF 475
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 165/374 (44%), Gaps = 23/374 (6%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
+ +H F+++ G+ K L F + + + +F ++ +V WN+MI
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTF--YGRTGELVSSSCLFDELKEKDVIVWNSMITALN 164
Query: 124 ESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVF 183
++ A+ + +M E D+ T A+S R+ LH + I+ G
Sbjct: 165 QNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSS 224
Query: 184 VRNSLLHIYAACGDTESAHKVFESMTDRFAL-----------NGRPNEALTLFREMSANG 232
+ N+L+++YA + SA VF M R + NG P ++L F+ M+ +G
Sbjct: 225 LCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSG 284
Query: 233 VEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVV--NALLDLYAKCGSIRE 290
E D T ++SAC+ + L LG +H ++K+G HV N+++ +Y+KCG
Sbjct: 285 QEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEA 344
Query: 291 AQQVFGEMEERNVVSWTTLIVGLAVNG-FGXXXXXXXXXXXXQKLAPGEITFVGVLYACS 349
A+ VF E+ R+V+S ++ G A NG F K+ P T V + C
Sbjct: 345 AETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICG 404
Query: 350 HCGMLDEG---FDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNA 406
EG Y RM+ + + +E ++D+ + GL QA E + +
Sbjct: 405 DLSFSREGRAVHGYTVRMEMQ---SRALEVINSVIDMYGKCGLTTQA-ELLFKTTTHRDL 460
Query: 407 VIWRTLLGACTIHG 420
V W +++ A + +G
Sbjct: 461 VSWNSMISAFSQNG 474
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 143/315 (45%), Gaps = 53/315 (16%)
Query: 46 LTKCISLLQYCASSKHKLKQIHAFS-------IRH------GVPLHNPDMG--------- 83
LT S++ CASS H L+ + AF IRH G + ++G
Sbjct: 545 LTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFH 604
Query: 84 --------------KHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPK 129
++ + T+ + A VF +I +PN+ +WN +I ++++ +
Sbjct: 605 GLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGR 664
Query: 130 PALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLL 189
+R + + EP+ T+ LL A ++ + G H I+ GF++ FV +L+
Sbjct: 665 EVFQLFRNLKL---EPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALV 721
Query: 190 HIYAACGDTESAHKVF-----------ESMTDRFALNGRPNEALTLFREMSANG-VEPDG 237
+Y++CG E+ KVF S+ +G +A+ LF+E+S+N +EP+
Sbjct: 722 DMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNK 781
Query: 238 FTVVSLLSACAELGALELGRRVHVYL-LKAGLRENLHVVNALLDLYAKCGSIREAQQ-VF 295
+ +SLLSAC+ G ++ G + + K G++ ++D+ + G +REA + +
Sbjct: 782 SSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFIT 841
Query: 296 GEMEERNVVSWTTLI 310
G E + W L+
Sbjct: 842 GIGEPQKAGVWGALL 856
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 174/419 (41%), Gaps = 68/419 (16%)
Query: 64 KQIHAFSIRHGV-PLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGY 122
+ +H I+ G P + +G +I ++ S A VF + +V + N ++ G+
Sbjct: 309 ESLHGLVIKSGYSPEAHVSVGNSII-SMYSKCGDTEAAETVFEELVCRDVISSNAILNGF 367
Query: 123 AESQDPKPALHFYRQM-TMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESL 181
A + + A QM ++ ++PD T + REG A+H T++ +S
Sbjct: 368 AANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSR 427
Query: 182 VF-VRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMS 229
V NS++ +Y CG T A +F++ T R F+ NG ++A LF+E+
Sbjct: 428 ALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVV 487
Query: 230 ANGVEPDGF---TVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCG 286
+ F TV+++L++C +L G+ VH +L K G + +A L L
Sbjct: 488 SE-YSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLG-----DLTSAFLRLETMS- 540
Query: 287 SIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQ-KLAPGEITFVGVL 345
E R++ SW ++I G A +G + K+ IT +G +
Sbjct: 541 ------------ETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTI 588
Query: 346 YACSHCGMLDEG-------FDYFRRMKEE--------YGIAPRIE--------------- 375
A + G++ +G R + + YG IE
Sbjct: 589 SASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLC 648
Query: 376 HYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLK 434
+ C++ LS+ ++ ++ +N+ ++PN + + LL A T G S G A HL++
Sbjct: 649 SWNCVISALSQNKAGREVFQLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIR 707
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 147/475 (30%), Positives = 224/475 (47%), Gaps = 55/475 (11%)
Query: 52 LLQYCASSKHKL---KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIR 108
+L+ CA ++ K +H+ SI+ GV + +G LI +S A VF +
Sbjct: 51 ILRACACVVPRVVLGKLLHSESIKFGV-CSDVMVGSSLISMYGKCGCVVS-ARKVFDEMP 108
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSL------- 161
NV TWN MI GY + D A + +++ V +T T+ ++K K +
Sbjct: 109 ERNVATWNAMIGGYMSNGDAVLASGLFEEIS---VCRNTVTWIEMIKGYGKRIEIEKARE 165
Query: 162 ----------NVREGEALHSVTIKNG--------FESL----VFVRNSLLHIYAACGDTE 199
NV+ + V + N FE + FV + ++ Y GD
Sbjct: 166 LFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVH 225
Query: 200 SAHKVFESMTDR-----------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACA 248
A +F + R +A NG ++A+ F M G EPD TV S+LSACA
Sbjct: 226 EARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACA 285
Query: 249 ELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTT 308
+ G L++GR VH + G+ N V NAL+D+YAKCG + A VF + R+V +
Sbjct: 286 QSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNS 345
Query: 309 LIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEY 368
+I LA++G G L P EITF+ VL AC H G L EG F MK +
Sbjct: 346 MISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ- 404
Query: 369 GIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIA 428
+ P ++H+GC++ LL R+G +K+AY ++ M V+PN + LLGAC +H + E
Sbjct: 405 DVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQV 464
Query: 429 RSHLLKLEPKHSGDY-----VLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYS 478
+++ + Y +SNLYA RW + +R M + G++K+PG S
Sbjct: 465 MK-IIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 129/311 (41%), Gaps = 46/311 (14%)
Query: 151 PFLLKAVSKSL-NVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMT 209
P +L+A + + V G+ LHS +IK G S V V +SL+ +Y CG SA KVF+ M
Sbjct: 49 PLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMP 108
Query: 210 DR-----------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRR 258
+R + NG A LF E+S V + T + ++ + +E R
Sbjct: 109 ERNVATWNAMIGGYMSNGDAVLASGLFEEIS---VCRNTVTWIEMIKGYGKRIEIEKARE 165
Query: 259 -----------VHVYLLKAGL------------------RENLHVVNALLDLYAKCGSIR 289
V + + G+ +N V + ++ Y + G +
Sbjct: 166 LFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVH 225
Query: 290 EAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACS 349
EA+ +F + R++V W TLI G A NG+ + P +T +L AC+
Sbjct: 226 EARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACA 285
Query: 350 HCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIW 409
G LD G + + GI ++D+ ++ G ++ A +++ V+ A
Sbjct: 286 QSGRLDVGRE-VHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACC- 343
Query: 410 RTLLGACTIHG 420
+++ IHG
Sbjct: 344 NSMISCLAIHG 354
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 112/238 (47%), Gaps = 17/238 (7%)
Query: 216 GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVV 275
G P +AL L+ + GV G+ + L + + + LG+ +H +K G+ ++ V
Sbjct: 25 GSPIQALVLYGGIRRRGVYFPGWVPLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVG 84
Query: 276 NALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLA 335
++L+ +Y KCG + A++VF EM ERNV +W +I G NG +
Sbjct: 85 SSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNG---DAVLASGLFEEISVC 141
Query: 336 PGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYE 395
+T++ ++ +++ + F RM E ++ + M+ + ++ A +
Sbjct: 142 RNTVTWIEMIKGYGKRIEIEKARELFERMPFEL---KNVKAWSVMLGVYVNNRKMEDARK 198
Query: 396 YIQNMPVQPNAVIWRTLLGACTIHGHLSLGEI--ARSHLLKLEPKHSGDYVLLSNLYA 451
+ +++P + NA +W ++ G+ +G++ AR+ ++ + D V+ + L A
Sbjct: 199 FFEDIP-EKNAFVWSLMMS-----GYFRIGDVHEARAIFYRVFAR---DLVIWNTLIA 247
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 139/466 (29%), Positives = 233/466 (50%), Gaps = 55/466 (11%)
Query: 65 QIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAE 124
Q+H +++ G + +G L+ ++ S A +F + + +V T+N I G E
Sbjct: 150 QLHCLAMKSGFEME-VYVGTSLV-SMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLME 207
Query: 125 S--QDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLV 182
+ + P++ F S EP+ T+ + A + LN++ G LH + +K F+
Sbjct: 208 NGVMNLVPSV-FNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFET 266
Query: 183 FVRNSLLHIYAACGDTESAHKVFESMTDR------------FALNGRPNEALTLFREMSA 230
V +L+ +Y+ C +SA+ VF + D +NG+ A+ LF ++ +
Sbjct: 267 MVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDS 326
Query: 231 NGVEPD---------GFT--------------------------VVSLLSACAELGALEL 255
G++PD GF+ + SLLSAC+++ L+
Sbjct: 327 EGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKN 386
Query: 256 GRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEER--NVVSWTTLIVGL 313
G+ +H +++KA ++ V+ +L+D+Y KCG A+++F E + + V W +I G
Sbjct: 387 GKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGY 446
Query: 314 AVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPR 373
+G +K+ P TF VL ACSHCG +++G FR M+EEYG P
Sbjct: 447 GKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPS 506
Query: 374 IEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLL 433
EH GCM+DLL R+G +++A E I M ++V +LLG+C H LGE A L
Sbjct: 507 TEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLA 565
Query: 434 KLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSL 479
+LEP++ +V+LS++YA+ RW DV++IR+ + Q + K PG SL
Sbjct: 566 ELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSL 611
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 21/239 (8%)
Query: 162 NVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFAL------- 214
++ G LH + +K+GFE V+V SL+ +Y+ CG+ A ++FE + + +
Sbjct: 144 DIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFIS 203
Query: 215 ----NGRPN---EALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAG 267
NG N L R+ S+ EP+ T V+ ++ACA L L+ GR++H ++K
Sbjct: 204 GLMENGVMNLVPSVFNLMRKFSSE--EPNDVTFVNAITACASLLNLQYGRQLHGLVMKKE 261
Query: 268 LRENLHVVNALLDLYAKCGSIREAQQVFGEMEE-RNVVSWTTLIVGLAVNGFGXXXXXXX 326
+ V AL+D+Y+KC + A VF E+++ RN++SW ++I G+ +NG
Sbjct: 262 FQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELF 321
Query: 327 XXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLS 385
+ L P T+ ++ S G + E F +F RM + P ++ C+ LLS
Sbjct: 322 EKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVV-MVPSLK---CLTSLLS 376
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 18/290 (6%)
Query: 145 PDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKV 204
P+ T+P LLK+ +K +V +G LH+ +K GF VF +L+ +Y A KV
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 205 FESMTDR-----------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGAL 253
+ M +R NG +A +F + +G + TV S+L C G +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDI 145
Query: 254 ELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGL 313
E G ++H +K+G ++V +L+ +Y++CG A ++F ++ ++VV++ I GL
Sbjct: 146 EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGL 205
Query: 314 AVNG-FGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFD-YFRRMKEEYGIA 371
NG P ++TFV + AC+ L G + MK+E+
Sbjct: 206 MENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFE 265
Query: 372 PRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGH 421
+ ++D+ S+ K AY + N + W +++ I+G
Sbjct: 266 TMVGT--ALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQ 313
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 135/407 (33%), Positives = 217/407 (53%), Gaps = 21/407 (5%)
Query: 111 NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALH 170
++ TWNT+ G E+ + AL+ M V + LKA S ++ G+ H
Sbjct: 284 SIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFH 343
Query: 171 SVTIKNGFES--LVFVRNSLLHIYAACGDTESAHKVFE-----------SMTDRFALNGR 217
+ I++ S + VRNSL+ +Y+ C D A VF+ S+ FA N R
Sbjct: 344 CLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNER 403
Query: 218 PNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLK-AGLRENLHVVN 276
E L +EM +G P+ T+ S+L A +G L+ G+ H Y+L+ ++ L + N
Sbjct: 404 SEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWN 463
Query: 277 ALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAP 336
+L+D+YAK G I A++VF M +R+ V++T+LI G G G + P
Sbjct: 464 SLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKP 523
Query: 337 GEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEY 396
+T V VL ACSH ++ EG F +M+ +GI R+EHY CMVDL RAG + +A +
Sbjct: 524 DHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDI 583
Query: 397 IQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSH-LLKLEPKHSGDYVLLSNLYASERR 455
+P +P++ + TLL AC IHG+ ++GE A LL+ +P+H G Y+LL+++YA
Sbjct: 584 FHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGS 643
Query: 456 WTDVQTIRKSMLQD-GVKKTPGYSLVELGNRVYEFTMGDRSHPQSQD 501
W+ + T+ K++L D GV+K ++L+E + + G+ + P + D
Sbjct: 644 WSKLVTV-KTLLSDLGVQKAHEFALMETDSEL----DGENNKPMNDD 685
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 126/249 (50%), Gaps = 21/249 (8%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
K H IR H+ D ++ + T+ S + + +A +VF + ++ TWN++I G+A
Sbjct: 340 KVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFA 399
Query: 124 ESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTI-KNGFESLV 182
++ + ++M +S P+ T +L ++ N++ G+ H + + ++ +
Sbjct: 400 YNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCL 459
Query: 183 FVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMSAN 231
+ NSL+ +YA G+ +A +VF+SM R + G+ AL F++M +
Sbjct: 460 ILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRS 519
Query: 232 GVEPDGFTVVSLLSACAELGALELG-----RRVHVYLLKAGLRENLHVVNALLDLYAKCG 286
G++PD T+V++LSAC+ + G + HV+ G+R L + ++DLY + G
Sbjct: 520 GIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVF----GIRLRLEHYSCMVDLYCRAG 575
Query: 287 SIREAQQVF 295
+ +A+ +F
Sbjct: 576 YLDKARDIF 584
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/437 (20%), Positives = 180/437 (41%), Gaps = 62/437 (14%)
Query: 45 VLTKCISLLQYCASSKHKL--KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHL 102
VL SLL C + +Q+HA I G+ + L+ +V+ + +
Sbjct: 82 VLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSV-----LVPKLVTFYSAFNLLDE 136
Query: 103 VFTMIRNPNVF---TWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
T+ N + WN +I Y ++ + ++ Y++M + D TYP ++KA +
Sbjct: 137 AQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAA 196
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNG--- 216
L+ G +H + ++V N+L+ +Y G + A ++F+ M++R A++
Sbjct: 197 LLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAI 256
Query: 217 --------RPNEALTLFREMSANGVEPDGFT----------------------------- 239
+ EA L M +GVE T
Sbjct: 257 INCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNV 316
Query: 240 ------VVSLLSACAELGALELGRRVHVYLLKA-GLRENL-HVVNALLDLYAKCGSIREA 291
+++ L AC+ +GAL+ G+ H ++++ ++ +V N+L+ +Y++C +R A
Sbjct: 317 RIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHA 376
Query: 292 QQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHC 351
VF ++E ++ +W ++I G A N P IT +L +
Sbjct: 377 FIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARV 436
Query: 352 GMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRT 411
G L G ++ + + + +VD+ +++G + A +M + + V + +
Sbjct: 437 GNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTS 495
Query: 412 LLGACTIHGHLSLGEIA 428
L+ +G L GE+A
Sbjct: 496 LIDG---YGRLGKGEVA 509
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 135/407 (33%), Positives = 217/407 (53%), Gaps = 21/407 (5%)
Query: 111 NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALH 170
++ TWNT+ G E+ + AL+ M V + LKA S ++ G+ H
Sbjct: 284 SIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFH 343
Query: 171 SVTIKNGFES--LVFVRNSLLHIYAACGDTESAHKVFE-----------SMTDRFALNGR 217
+ I++ S + VRNSL+ +Y+ C D A VF+ S+ FA N R
Sbjct: 344 CLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNER 403
Query: 218 PNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLK-AGLRENLHVVN 276
E L +EM +G P+ T+ S+L A +G L+ G+ H Y+L+ ++ L + N
Sbjct: 404 SEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWN 463
Query: 277 ALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAP 336
+L+D+YAK G I A++VF M +R+ V++T+LI G G G + P
Sbjct: 464 SLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKP 523
Query: 337 GEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEY 396
+T V VL ACSH ++ EG F +M+ +GI R+EHY CMVDL RAG + +A +
Sbjct: 524 DHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDI 583
Query: 397 IQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSH-LLKLEPKHSGDYVLLSNLYASERR 455
+P +P++ + TLL AC IHG+ ++GE A LL+ +P+H G Y+LL+++YA
Sbjct: 584 FHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGS 643
Query: 456 WTDVQTIRKSMLQD-GVKKTPGYSLVELGNRVYEFTMGDRSHPQSQD 501
W+ + T+ K++L D GV+K ++L+E + + G+ + P + D
Sbjct: 644 WSKLVTV-KTLLSDLGVQKAHEFALMETDSEL----DGENNKPMNDD 685
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 126/249 (50%), Gaps = 21/249 (8%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
K H IR H+ D ++ + T+ S + + +A +VF + ++ TWN++I G+A
Sbjct: 340 KVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFA 399
Query: 124 ESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTI-KNGFESLV 182
++ + ++M +S P+ T +L ++ N++ G+ H + + ++ +
Sbjct: 400 YNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCL 459
Query: 183 FVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMSAN 231
+ NSL+ +YA G+ +A +VF+SM R + G+ AL F++M +
Sbjct: 460 ILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRS 519
Query: 232 GVEPDGFTVVSLLSACAELGALELG-----RRVHVYLLKAGLRENLHVVNALLDLYAKCG 286
G++PD T+V++LSAC+ + G + HV+ G+R L + ++DLY + G
Sbjct: 520 GIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVF----GIRLRLEHYSCMVDLYCRAG 575
Query: 287 SIREAQQVF 295
+ +A+ +F
Sbjct: 576 YLDKARDIF 584
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/437 (20%), Positives = 180/437 (41%), Gaps = 62/437 (14%)
Query: 45 VLTKCISLLQYCASSKHKL--KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHL 102
VL SLL C + +Q+HA I G+ + L+ +V+ + +
Sbjct: 82 VLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSV-----LVPKLVTFYSAFNLLDE 136
Query: 103 VFTMIRNPNVF---TWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
T+ N + WN +I Y ++ + ++ Y++M + D TYP ++KA +
Sbjct: 137 AQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAA 196
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNG--- 216
L+ G +H + ++V N+L+ +Y G + A ++F+ M++R A++
Sbjct: 197 LLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAI 256
Query: 217 --------RPNEALTLFREMSANGVEPDGFT----------------------------- 239
+ EA L M +GVE T
Sbjct: 257 INCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNV 316
Query: 240 ------VVSLLSACAELGALELGRRVHVYLLKA-GLRENL-HVVNALLDLYAKCGSIREA 291
+++ L AC+ +GAL+ G+ H ++++ ++ +V N+L+ +Y++C +R A
Sbjct: 317 RIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHA 376
Query: 292 QQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHC 351
VF ++E ++ +W ++I G A N P IT +L +
Sbjct: 377 FIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARV 436
Query: 352 GMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRT 411
G L G ++ + + + +VD+ +++G + A +M + + V + +
Sbjct: 437 GNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTS 495
Query: 412 LLGACTIHGHLSLGEIA 428
L+ +G L GE+A
Sbjct: 496 LIDG---YGRLGKGEVA 509
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 205 bits (521), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 126/393 (32%), Positives = 195/393 (49%), Gaps = 19/393 (4%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQM--TMSCVEPDTHTYPFLLKAV 157
A VF + + ++ WN ++ Y + A + M + D T+ LL A
Sbjct: 196 ARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC 255
Query: 158 SKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR------ 211
+ +G+ +H++ K ++ + V +LL++YA A + FESM R
Sbjct: 256 ----RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWN 311
Query: 212 -----FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKA 266
FA NG EA+ LF +M ++PD T S+LS+CA+ A+ ++V + K
Sbjct: 312 AMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKK 371
Query: 267 GLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXX 326
G + L V N+L+ Y++ G++ EA F + E ++VSWT++I LA +GF
Sbjct: 372 GSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMF 431
Query: 327 XXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSR 386
QKL P +ITF+ VL ACSH G++ EG F+RM E Y I EHY C++DLL R
Sbjct: 432 ESML-QKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGR 490
Query: 387 AGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLL 446
AG + +A + + +MP +P+ G C IH + LL++EP +Y +L
Sbjct: 491 AGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSIL 550
Query: 447 SNLYASERRWTDVQTIRKSMLQDGVK-KTPGYS 478
SN Y SE W +RK ++ KTPG S
Sbjct: 551 SNAYVSEGHWNQAALLRKRERRNCYNPKTPGCS 583
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 185/394 (46%), Gaps = 27/394 (6%)
Query: 63 LKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGY 122
+KQ H F ++ G+ +N ++ + + A +F + N+ TWN +I G
Sbjct: 55 VKQEHGFMVKQGI--YNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGV 112
Query: 123 AESQ-DPKPALH----FYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNG 177
+ D H + ++ + V D ++ L++ + S N++ G LH + +K G
Sbjct: 113 IQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQG 172
Query: 178 FESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFR 226
ES F SL+H Y CG A +VFE++ DR + LNG +EA L +
Sbjct: 173 LESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLK 232
Query: 227 EMSA--NGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAK 284
M + N D FT SLLSAC +E G+++H L K + ++ V ALL++YAK
Sbjct: 233 LMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATALLNMYAK 288
Query: 285 CGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGV 344
+ +A++ F M RNVVSW +IVG A NG G + L P E+TF V
Sbjct: 289 SNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASV 348
Query: 345 LYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQP 404
L +C+ + E + M + G A + ++ SR G + +A ++ +P
Sbjct: 349 LSSCAKFSAIWE-IKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIR-EP 406
Query: 405 NAVIWRTLLGACTIHGHLSLG-EIARSHLLKLEP 437
+ V W +++GA HG ++ S L KL+P
Sbjct: 407 DLVSWTSVIGALASHGFAEESLQMFESMLQKLQP 440
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 122/268 (45%), Gaps = 33/268 (12%)
Query: 51 SLLQYCASSKHKLKQIHAF----SIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTM 106
SLL C + K QIHA S + +P+ + + + S +S A F
Sbjct: 250 SLLSACRIEQGK--QIHAILFKVSYQFDIPVATA------LLNMYAKSNHLSDARECFES 301
Query: 107 IRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREG 166
+ NV +WN MI G+A++ + + A+ + QM + ++PD T+ +L + +K + E
Sbjct: 302 MVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEI 361
Query: 167 EALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTD-----------RFALN 215
+ + ++ K G + V NSL+ Y+ G+ A F S+ + A +
Sbjct: 362 KQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASH 421
Query: 216 GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELG-----RRVHVYLLKAGLRE 270
G E+L +F M ++PD T + +LSAC+ G ++ G R Y ++A E
Sbjct: 422 GFAEESLQMFESM-LQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEA---E 477
Query: 271 NLHVVNALLDLYAKCGSIREAQQVFGEM 298
+ H L+DL + G I EA V M
Sbjct: 478 DEHYT-CLIDLLGRAGFIDEASDVLNSM 504
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 205 bits (521), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 130/444 (29%), Positives = 221/444 (49%), Gaps = 47/444 (10%)
Query: 108 RNP---NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVR 164
RNP + +WNT+I GYA++ + AL M + ++ D H++ +L +S +++
Sbjct: 218 RNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLK 277
Query: 165 EGEALHSVTIKNGFESLVFVRNSLLHIYAACGD---TESAH------------------- 202
G+ +H+ +KNG S FV + ++ +Y CG+ ESAH
Sbjct: 278 IGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYS 337
Query: 203 ---------KVFESMTDRFA----------LNGR-PNEALTLFREMSANGVE-PDGFTVV 241
++F+S++++ LN R P+ L L R AN PD +V
Sbjct: 338 SQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMV 397
Query: 242 SLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEER 301
S+L AC+ +E G+ +H + L+ G+ + +V A +D+Y+KCG++ A+++F ER
Sbjct: 398 SVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFER 457
Query: 302 NVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYF 361
+ V + +I G A +G P EITF+ +L AC H G++ EG YF
Sbjct: 458 DTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYF 517
Query: 362 RRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMP-VQPNAVIWRTLLGACTIHG 420
+ M E Y I+P HY CM+DL +A + +A E ++ + V+ +AVI L AC+ +
Sbjct: 518 KSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNK 577
Query: 421 HLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLV 480
+ L + LL +E + Y+ ++N YAS RW ++Q IR M ++ G S
Sbjct: 578 NTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWA 637
Query: 481 ELGNRVYEFTMGDRSHPQSQDVYA 504
+ + + FT D SH +++ +YA
Sbjct: 638 NIDKQFHMFTSSDISHYETEAIYA 661
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 163/398 (40%), Gaps = 95/398 (23%)
Query: 111 NVFTWNTMIRGYAESQD-PKPALHFYRQM---TMSCVEPDTHTYPFLLKAVSKSLNVREG 166
++ T+NT++ G+A++ A+ + +M + D T ++K +K NV G
Sbjct: 85 DLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYG 144
Query: 167 EALHSVTIKNGFESLVFVRNSLLHIYAACG------------------------------ 196
E LH V +K G + F +SL+H+Y+ CG
Sbjct: 145 EQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYC 204
Query: 197 ---DTESAHKVF------------ESMTDRFALNGRPNEALTLFREMSANGVEPDGFTVV 241
D + A VF ++ +A NG EAL + M NG++ D +
Sbjct: 205 REGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFG 264
Query: 242 SLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIR------------ 289
++L+ + L +L++G+ VH +LK G N V + ++D+Y KCG+++
Sbjct: 265 AVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFG 324
Query: 290 -------------------EAQQVFGEMEERNVVSWTTLIVG-LAVNGFGXXXXXXXXXX 329
EA+++F + E+N+V WT + +G L +
Sbjct: 325 NLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFI 384
Query: 330 XXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRI------EHYGCMVDL 383
+ P + V VL ACS ++ G KE +G + R + VD+
Sbjct: 385 ANETNTPDSLVMVSVLGACSLQAYMEPG-------KEIHGHSLRTGILMDKKLVTAFVDM 437
Query: 384 LSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGH 421
S+ G V+ A E I + + + V++ ++ C HGH
Sbjct: 438 YSKCGNVEYA-ERIFDSSFERDTVMYNAMIAGCAHHGH 474
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 16/239 (6%)
Query: 92 SLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVE-PDTHTY 150
S M A +F + N+ W M GY + P L R + PD+
Sbjct: 337 SSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVM 396
Query: 151 PFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTD 210
+L A S + G+ +H +++ G + + + +Y+ CG+ E A ++F+S +
Sbjct: 397 VSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFE 456
Query: 211 R-----------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRV 259
R A +G ++ F +M+ G +PD T ++LLSAC G + G +
Sbjct: 457 RDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKY 516
Query: 260 HVYLLKA-GLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNG 317
+++A + ++DLY K + +A ++ ME + V +I+G +N
Sbjct: 517 FKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIEL---MEGIDQVEKDAVILGAFLNA 572
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 124/315 (39%), Gaps = 64/315 (20%)
Query: 116 NTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIK 175
N ++ Y++S + A + + +M +E + +++ ++ A K NV+E L
Sbjct: 27 NQLVNLYSKSGLLREARNVFDEM----LERNVYSWNAVIAAYVKFNNVKEARELFE---S 79
Query: 176 NGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREM---SANG 232
+ E + N+LL +A ES EA+ +F EM +
Sbjct: 80 DNCERDLITYNTLLSGFAKTDGCES-------------------EAIEMFGEMHRKEKDD 120
Query: 233 VEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQ 292
+ D FTV +++ A+L + G ++H L+K G V++L+ +Y+KCG +E
Sbjct: 121 IWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVC 180
Query: 293 QVF-----------------------GEMEE-----------RNVVSWTTLIVGLAVNGF 318
+F G++++ + +SW TLI G A NG+
Sbjct: 181 NIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGY 240
Query: 319 GXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYG 378
L E +F VL S L G + R+ + + + G
Sbjct: 241 EEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSG 300
Query: 379 CMVDLLSRAGLVKQA 393
+VD+ + G +K A
Sbjct: 301 -IVDVYCKCGNMKYA 314
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/360 (31%), Positives = 186/360 (51%), Gaps = 20/360 (5%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A VF+ + ++ +N MI GYA + AL+ + M + ++PD T+ L+ S
Sbjct: 171 ARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSH 230
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPN 219
N + + + +G++ D S + + F +
Sbjct: 231 MRNEEKVSEILELMCLDGYKP----------------DVVSWTSIISGLVHNF----QNE 270
Query: 220 EALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALL 279
+A F++M +G+ P+ T+++LL AC L ++ G+ +H Y + GL ++ V +ALL
Sbjct: 271 KAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALL 330
Query: 280 DLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEI 339
D+Y KCG I EA +F + ++ V++ ++I A +G +
Sbjct: 331 DMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHL 390
Query: 340 TFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQN 399
TF +L ACSH G+ D G + F M+ +Y I PR+EHY CMVDLL RAG + +AYE I+
Sbjct: 391 TFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKA 450
Query: 400 MPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDV 459
M ++P+ +W LL AC HG++ L IA HL +LEP++SG+ +LL++LYA+ W V
Sbjct: 451 MRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESV 510
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 132/292 (45%), Gaps = 15/292 (5%)
Query: 149 TYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESM 208
+Y L++A + G LH+ + +G L + L+ Y CG A KVF+ M
Sbjct: 18 SYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEM 77
Query: 209 TDR-----------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGR 257
R A NG E+L FREM +G++ D F V SLL A L E G+
Sbjct: 78 PKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGK 137
Query: 258 RVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNG 317
+H +LK + +V++L+D+Y+K G + A++VF ++ E+++V + +I G A N
Sbjct: 138 MIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNS 197
Query: 318 FGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHY 377
+ P IT+ ++ SH ++ + M + G P + +
Sbjct: 198 QADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLD-GYKPDVVSW 256
Query: 378 GCMVDLLSRAGLVKQAYEYIQNM---PVQPNAVIWRTLLGACTIHGHLSLGE 426
++ L ++A++ + M + PN+ TLL ACT ++ G+
Sbjct: 257 TSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGK 308
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 138/336 (41%), Gaps = 52/336 (15%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A VF + ++ MI A + + +L F+R+M ++ D P LLKA
Sbjct: 70 ARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRN 129
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE-----------SM 208
L+ G+ +H + +K +ES F+ +SL+ +Y+ G+ +A KVF +M
Sbjct: 130 LLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAM 189
Query: 209 TDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGL 268
+A N + +EAL L ++M G++PD T +L+S + +
Sbjct: 190 ISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHM------------------ 231
Query: 269 RENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXX 328
N V+ +L+L G + +VVSWT++I GL N
Sbjct: 232 -RNEEKVSEILELMCLDGY------------KPDVVSWTSIISGLVHNFQNEKAFDAFKQ 278
Query: 329 XXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYG----CMVDLL 384
L P T + +L AC+ + G + Y + +E +G ++D+
Sbjct: 279 MLTHGLYPNSATIITLLPACTTLAYMKHG-----KEIHGYSVVTGLEDHGFVRSALLDMY 333
Query: 385 SRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHG 420
+ G + +A + P + V + +++ HG
Sbjct: 334 GKCGFISEAMILFRKTP-KKTTVTFNSMIFCYANHG 368
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/456 (29%), Positives = 228/456 (50%), Gaps = 36/456 (7%)
Query: 45 VLTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLV- 103
VL C SLL Y + + Q+HA I+ G + K + + S Y HLV
Sbjct: 90 VLGAC-SLLSYPETGR----QVHALMIKQGA--ETGTISKTALIDMYS-----KYGHLVD 137
Query: 104 ----FTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
F + ++ +WN ++ G+ + K AL + M VE T ++K +
Sbjct: 138 SVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCAS 197
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESM---TDRFALNG 216
+++G+ +H++ + G LV + +++ Y++ G A KV+ S+ TD LN
Sbjct: 198 LKILQQGKQVHAMVVVTG-RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNS 256
Query: 217 ------RPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRE 270
R F MS P+ + S L+ C++ L +G+++H L+ G
Sbjct: 257 LISGCIRNRNYKEAFLLMSRQ--RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVS 314
Query: 271 NLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXX 330
+ + N L+D+Y KCG I +A+ +F + ++VVSWT++I AVNG G
Sbjct: 315 DSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMC 374
Query: 331 XQK--LAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAG 388
+ + P +TF+ V+ AC+H G++ EG + F MKE+Y + P EHY C +D+LS+AG
Sbjct: 375 EEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAG 434
Query: 389 LVKQAYEYIQNMPVQPN----AVIWRTLLGACTIHGHLSLGE-IARSHLLKLEPKHSGDY 443
++ + ++ M N IW +L AC+++ L+ GE +AR + + P+++ Y
Sbjct: 435 ETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIY 494
Query: 444 VLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSL 479
VL+SN YA+ +W V+ +R + G+ KT G+SL
Sbjct: 495 VLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHSL 530
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 96/204 (47%), Gaps = 6/204 (2%)
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
+G PN+ L LF ++ + T +L AC+ L E GR+VH ++K G
Sbjct: 62 SGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTIS 121
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKL 334
AL+D+Y+K G + ++ +VF +EE+++VSW L+ G NG G +++
Sbjct: 122 KTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERV 181
Query: 335 APGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPR--IEHYGCMVDLLSRAGLVKQ 392
E T V+ C+ +L +G +++ + R + M+ S GL+ +
Sbjct: 182 EISEFTLSSVVKTCASLKILQQG----KQVHAMVVVTGRDLVVLGTAMISFYSSVGLINE 237
Query: 393 AYEYIQNMPVQPNAVIWRTLLGAC 416
A + ++ V + V+ +L+ C
Sbjct: 238 AMKVYNSLNVHTDEVMLNSLISGC 261
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 133/319 (41%), Gaps = 42/319 (13%)
Query: 125 SQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFV 184
S +P L + Q+ + + +HT+ +L A S G +H++ IK G E+
Sbjct: 62 SGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTIS 121
Query: 185 RNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMSANGV 233
+ +L+ +Y+ G + +VFES+ ++ F NG+ EAL +F M V
Sbjct: 122 KTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERV 181
Query: 234 EPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQ 293
E FT+ S++ CA L L+ G++VH ++ G R+ + + A++ Y+ G I EA +
Sbjct: 182 EISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG-RDLVVLGTAMISFYSSVGLINEAMK 240
Query: 294 VFGEME-ERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACS--- 349
V+ + + V +LI G N + P L CS
Sbjct: 241 VYNSLNVHTDEVMLNSLISGCIRN-----RNYKEAFLLMSRQRPNVRVLSSSLAGCSDNS 295
Query: 350 --------HCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMP 401
HC L GF ++ ++D+ + G + QA + +P
Sbjct: 296 DLWIGKQIHCVALRNGFVSDSKLCNG------------LMDMYGKCGQIVQARTIFRAIP 343
Query: 402 VQPNAVIWRTLLGACTIHG 420
+ V W +++ A ++G
Sbjct: 344 -SKSVVSWTSMIDAYAVNG 361
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 202/395 (51%), Gaps = 20/395 (5%)
Query: 103 VFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLN 162
VF + N +W MI G +Q+ + + +R M + P+ T LL + +
Sbjct: 207 VFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVT---LLSVLPACVE 263
Query: 163 VREGEAL----HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE-----------S 207
+ G +L H + ++G + + + + +Y CG+ + +FE S
Sbjct: 264 LNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSS 323
Query: 208 MTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAG 267
M +A G +E + L +M G+E + T+++++SAC L VH +LK G
Sbjct: 324 MISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCG 383
Query: 268 LRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXX 327
++ + NAL+D+YAKCGS+ A++VF E+ E+++VSW+++I ++G G
Sbjct: 384 FMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFK 443
Query: 328 XXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRA 387
++ F+ +L AC+H G+++E F + +Y + +EHY C ++LL R
Sbjct: 444 GMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAG-KYHMPVTLEHYACYINLLGRF 502
Query: 388 GLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSL-GEIARSHLLKLEPKHSGDYVLL 446
G + A+E NMP++P+A IW +LL AC HG L + G+I + L+K EP + +YVLL
Sbjct: 503 GKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLL 562
Query: 447 SNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVE 481
S ++ + + +R+ M + + K G+S +E
Sbjct: 563 SKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 139/324 (42%), Gaps = 40/324 (12%)
Query: 119 IRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVRE-----GEALHSVT 173
++G Q AL Y+ S T+ + +L +V K+ ++ G LH +
Sbjct: 17 LKGLVSDQFYDEALRLYKLKIHSL---GTNGFTAILPSVIKACAFQQEPFLLGAQLHCLC 73
Query: 174 IKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFAL-----------NGRPNEAL 222
+K G + V NSL+ +YA + KVF+ M R + +G EA+
Sbjct: 74 LKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAM 133
Query: 223 TLFREMSANGVEPDGFTVVSLLSACAELG-ALELGRRVH-VYLLKAGLRENLHVVNALLD 280
L +EM G P V SLL+ C +G + ++ R H + L+ ++E++ + AL+D
Sbjct: 134 KLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVD 193
Query: 281 LYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEIT 340
+Y K A VF +ME +N VSWT +I G N + L P +T
Sbjct: 194 MYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVT 253
Query: 341 FVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVD---------LLSRAGLVK 391
+ VL AC L+ G +KE +G + R +GC D + R G V
Sbjct: 254 LLSVLPACVE---LNYGSSL---VKEIHGFSFR---HGCHADERLTAAFMTMYCRCGNVS 304
Query: 392 QAYEYIQNMPVQPNAVIWRTLLGA 415
+ + V+ + V+W +++
Sbjct: 305 LSRVLFETSKVR-DVVMWSSMISG 327
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 91/217 (41%), Gaps = 18/217 (8%)
Query: 219 NEALTLFREMSANGVEPDGFTVV--SLLSACA-ELGALELGRRVHVYLLKAGLRENLHVV 275
+EAL L++ + + + +GFT + S++ ACA + LG ++H LKAG + V
Sbjct: 27 DEALRLYK-LKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVS 85
Query: 276 NALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLA 335
N+L+ +YAK ++VF EM R+ VS+ ++I +G
Sbjct: 86 NSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFI 145
Query: 336 PGEITFVGVLYACSHCGMLDEGFDYF-------RRMKEEYGIAPRIEHYGCMVDLLSRAG 388
P +L C+ G + F RM+E ++ +VD+ +
Sbjct: 146 PKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLST------ALVDMYLKFD 199
Query: 389 LVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLG 425
A+ M V+ N V W ++ C + + +G
Sbjct: 200 DHAAAFHVFDQMEVK-NEVSWTAMISGCVANQNYEMG 235
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 144/486 (29%), Positives = 225/486 (46%), Gaps = 87/486 (17%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMT--MSCVEPDTHTYPFLLKAV 157
A+ +F + N+ +W MI G+A ++ + AL + +M + V P+ T L A
Sbjct: 250 AYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYAC 309
Query: 158 SKSLNV---REGEALHSVTIKNGFESLVF---VRNSLLHIYAACG--------------- 196
L V R GE LH+ I NG+E++ + SL+H+YA+ G
Sbjct: 310 G-GLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDL 368
Query: 197 --------------DTESAHKVFE------------SMTDRFALNGRPNEALTLFR---- 226
D E A +FE SM D + G + A LF+
Sbjct: 369 QSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHD 428
Query: 227 ---------------------------EMSANGVEPDGFTVVSLLSACAELGALELGRRV 259
+M G++P T LLS+ L+ G+ +
Sbjct: 429 KDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHI 488
Query: 260 HVYLLK--AGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNG 317
H + K A +L + N+L+ +YAKCG+I +A ++F +M +++ VSW ++I+GL+ +G
Sbjct: 489 HCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHG 548
Query: 318 FGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHY 377
P +TF+GVL ACSH G++ G + F+ MKE Y I P I+HY
Sbjct: 549 LADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHY 608
Query: 378 GCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGH----LSLGEIARSHLL 433
M+DLL RAG +K+A E+I +P P+ ++ LLG C ++ + E A LL
Sbjct: 609 ISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLL 668
Query: 434 KLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGD 493
+L+P ++ +V L N+YA R + +RK M GVKKTPG S V + R F GD
Sbjct: 669 ELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGD 728
Query: 494 RSHPQS 499
+S ++
Sbjct: 729 KSASEA 734
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 107/218 (49%), Gaps = 22/218 (10%)
Query: 94 SAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFL 153
+ +S A +F + + + TW MI G +++ A M ++P TY L
Sbjct: 413 AGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVL 472
Query: 154 LKAVSKSLNVREGEALHSVTIKNG--FESLVFVRNSLLHIYAACGDTESAHKVFESMTDR 211
L + + N+ +G+ +H V K ++ + ++NSL+ +YA CG E A+++F M +
Sbjct: 473 LSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK 532
Query: 212 FALN-----------GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRV- 259
++ G ++AL LF+EM +G +P+ T + +LSAC+ G + G +
Sbjct: 533 DTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELF 592
Query: 260 ----HVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQ 293
Y ++ G+ + +++DL + G ++EA++
Sbjct: 593 KAMKETYSIQPGIDHYI----SMIDLLGRAGKLKEAEE 626
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 113/271 (41%), Gaps = 47/271 (17%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A ++F ++ N+ T N M+ GY + + A +R+M + V ++ +L A+
Sbjct: 96 ARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVV-----SWTVMLTALCD 150
Query: 160 SLNVREGEALHSVTIKNGF-ESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRP 218
+G + +V + + E V N+L+ GD E A +VF++M P
Sbjct: 151 -----DGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAM---------P 196
Query: 219 NEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNAL 278
+ + + M +E DG LL G + +N+ ++
Sbjct: 197 SRDVVSWNAMIKGYIENDGMEEAKLL-----FGDMS--------------EKNVVTWTSM 237
Query: 279 LDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGF--GXXXXXXXXXXXXQKLAP 336
+ Y + G +REA ++F EM ERN+VSWT +I G A N ++P
Sbjct: 238 VYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSP 297
Query: 337 GEITFVGVLYACSHCGMLDEGFDYFRRMKEE 367
T + + YAC G+ FRR+ E+
Sbjct: 298 NGETLISLAYACGGLGV------EFRRLGEQ 322
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 87/222 (39%), Gaps = 57/222 (25%)
Query: 94 SAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFL 153
+ M A VF + + +V +WN MI+GY E+ + A + M+
Sbjct: 182 NGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMS-------------- 227
Query: 154 LKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-- 211
E V S+++ Y GD A+++F M +R
Sbjct: 228 -------------------------EKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNI 262
Query: 212 ---------FALNGRPNEALTLFREM--SANGVEPDGFTVVSLLSACAELGA--LELGRR 258
FA N EAL LF EM + V P+G T++SL AC LG LG +
Sbjct: 263 VSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQ 322
Query: 259 VHVYLLKAGLRENLH---VVNALLDLYAKCGSIREAQQVFGE 297
+H ++ G H + +L+ +YA G I AQ + E
Sbjct: 323 LHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE 364
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 142/525 (27%), Positives = 240/525 (45%), Gaps = 90/525 (17%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLI--FTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRG 121
KQ HA +I +G+ L N +G L+ + V L + YA +VF + +V TWN +I G
Sbjct: 294 KQSHAIAIVNGMELDNI-LGTSLLNFYCKVGL---IEYAEMVFDRMFEKDVVTWNLIISG 349
Query: 122 YAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL------HS---- 171
Y + + A++ + M + ++ D T L+ A +++ N++ G+ + HS
Sbjct: 350 YVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESD 409
Query: 172 -----------------VTIKNGFESLV----FVRNSLLHIYAACGDTESAHKVF----- 205
V K F+S V + N+LL YA G + A ++F
Sbjct: 410 IVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQL 469
Query: 206 ---------------------------------------------ESMTDRFALNGRPNE 220
+M + NG E
Sbjct: 470 EGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEE 529
Query: 221 ALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENL-HVVNALL 279
A+ R+M +G+ P+ F++ LSACA L +L +GR +H Y+++ +L + +L+
Sbjct: 530 AILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLV 589
Query: 280 DLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEI 339
D+YAKCG I +A++VFG + +I A+ G L P I
Sbjct: 590 DMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNI 649
Query: 340 TFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQN 399
T VL AC+H G +++ + F + + + P +EHYG MVDLL+ AG ++A I+
Sbjct: 650 TITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEE 709
Query: 400 MPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDV 459
MP +P+A + ++L+ +C L + LL+ EP++SG+YV +SN YA E W +V
Sbjct: 710 MPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEV 769
Query: 460 QTIRKSMLQDGVKKTPGYSLVELGNR--VYEFTMGDRSHPQSQDV 502
+R+ M G+KK PG S +++ V+ F D++H + ++
Sbjct: 770 VKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEI 814
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 176/379 (46%), Gaps = 26/379 (6%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A VF I + N WN ++ GY ++ + A+ + M VEP T L A +
Sbjct: 227 ASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASAN 286
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-------- 211
V EG+ H++ I NG E + SLL+ Y G E A VF+ M ++
Sbjct: 287 MGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLI 346
Query: 212 ---FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGL 268
+ G +A+ + + M ++ D T+ +L+SA A L+LG+ V Y ++
Sbjct: 347 ISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSF 406
Query: 269 RENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXX 328
++ + + ++D+YAKCGSI +A++VF E++++ W TL+ A +G
Sbjct: 407 ESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYG 466
Query: 329 XXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAG 388
+ + P IT+ ++ + G +DE D F +M+ GI P + + M++ + + G
Sbjct: 467 MQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSS-GIIPNLISWTTMMNGMVQNG 525
Query: 389 LVKQAYEYIQNMP---VQPNAVIWRTLLGAC----------TIHGHLSLGEIARSHLLKL 435
++A +++ M ++PNA L AC TIHG++ + + S L+ +
Sbjct: 526 CSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYI-IRNLQHSSLVSI 584
Query: 436 EPKHSGDYVLLSNLYASER 454
E Y ++ +E+
Sbjct: 585 ETSLVDMYAKCGDINKAEK 603
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 160/370 (43%), Gaps = 27/370 (7%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
+P+ ++ + ++ + K AL +M + Y +L+ ++ G+
Sbjct: 32 SPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQ 91
Query: 169 LHSVTIKNG--FESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALN----------- 215
+H+ +KNG + ++ L+ YA C E A +F + R +
Sbjct: 92 IHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRI 151
Query: 216 GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVV 275
G AL F EM N + PD F V ++ AC L GR VH Y++K+GL + + V
Sbjct: 152 GLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVA 211
Query: 276 NALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLA 335
++L D+Y KCG + +A +VF E+ +RN V+W L+VG NG Q +
Sbjct: 212 SSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVE 271
Query: 336 PGEITFVGVLYACSHCGMLDEG-----FDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLV 390
P +T L A ++ G ++EG M+ + + + ++ C V L+ A
Sbjct: 272 PTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYA--- 328
Query: 391 KQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLY 450
E + + + + V W ++ G L I L++LE K D V L+ L
Sbjct: 329 ----EMVFDRMFEKDVVTWNLIISGYVQQG-LVEDAIYMCQLMRLE-KLKYDCVTLATLM 382
Query: 451 ASERRWTDVQ 460
++ R +++
Sbjct: 383 SAAARTENLK 392
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/383 (31%), Positives = 193/383 (50%), Gaps = 21/383 (5%)
Query: 111 NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALH 170
NV +WN+MI+ Y + D A + QM + DT ++ ++ + + AL
Sbjct: 280 NVVSWNSMIKAYLKVGDVVSARLLFDQMK----DRDTISWNTMIDGYVHVSRMEDAFALF 335
Query: 171 SVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPN 219
S S N ++ YA+ G+ E A FE ++ + N
Sbjct: 336 SEMPNRDAHSW----NMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYK 391
Query: 220 EALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALL 279
EA+ LF M+ G +PD T+ SLLSA L L LG ++H ++K + ++ V NAL+
Sbjct: 392 EAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI-PDVPVHNALI 450
Query: 280 DLYAKCGSIREAQQVFGEME-ERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGE 338
+Y++CG I E++++F EM+ +R V++W +I G A +G + P
Sbjct: 451 TMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSH 510
Query: 339 ITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQ 398
ITFV VL AC+H G++DE F M Y I P++EHY +V++ S G ++A I
Sbjct: 511 ITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIIT 570
Query: 399 NMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTD 458
+MP +P+ +W LL AC I+ ++ L +A + +LEP+ S YVLL N+YA W +
Sbjct: 571 SMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDE 630
Query: 459 VQTIRKSMLQDGVKKTPGYSLVE 481
+R +M +KK G S V+
Sbjct: 631 ASQVRMNMESKRIKKERGSSWVD 653
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 104/278 (37%), Gaps = 68/278 (24%)
Query: 94 SAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFL 153
S ++ A +F + N TWNTMI GY + ++ A + M + D T+ +
Sbjct: 53 SGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMP----KRDVVTWNTM 108
Query: 154 LKAVSKSLNVREGEALHSVTIKNGFESL----VFVRNSLLHIYAACGDTESAHKVFESMT 209
+ +R E + F+ + F N+++ YA A +FE M
Sbjct: 109 ISGYVSCGGIRFLEEARKL-----FDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMP 163
Query: 210 DR-----------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLS---------ACAE 249
+R F NG + A+ LFR+M P V L+ +
Sbjct: 164 ERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQ 223
Query: 250 LGALELGRRVHVY-----LLKAGLR------------------------------ENLHV 274
G+L GR VY ++ G R +N+
Sbjct: 224 YGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVS 283
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVG 312
N+++ Y K G + A+ +F +M++R+ +SW T+I G
Sbjct: 284 WNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDG 321
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 124/397 (31%), Positives = 189/397 (47%), Gaps = 52/397 (13%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
+QIH I++G +G LI + + + L F IR+ N+ WN ++ GYA
Sbjct: 336 RQIHGMLIKNGCE-TGIVLGNALI-DFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA 393
Query: 124 ESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVF 183
P L + QM P +T+ LK S V E + LHSV ++ G+E +
Sbjct: 394 NKDGP-ICLSLFLQMLQMGFRPTEYTFSTALK----SCCVTELQQLHSVIVRMGYEDNDY 448
Query: 184 VRNSLLHIYA--------------ACGDTE------------------SAHKVFESMT-- 209
V +SL+ YA A G T + K+ ++
Sbjct: 449 VLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQP 508
Query: 210 DRFALN------GRPN---EALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVH 260
D + N R + E + LF+ M + + PD +T VS+LS C++L L LG +H
Sbjct: 509 DTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIH 568
Query: 261 VYLLKAGLR-ENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFG 319
+ K + V N L+D+Y KCGSIR +VF E E+N+++WT LI L ++G+G
Sbjct: 569 GLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYG 628
Query: 320 XXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGC 379
P ++F+ +L AC H GM+ EG F++MK+ YG+ P ++HY C
Sbjct: 629 QEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKD-YGVEPEMDHYRC 687
Query: 380 MVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGAC 416
VDLL+R G +K+A I+ MP +A +WRT L C
Sbjct: 688 AVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 142/311 (45%), Gaps = 14/311 (4%)
Query: 50 ISLLQYCASSKHKL-KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIR 108
+S L CAS + Q+H S+++G+ + + +G L+ L + A VF +
Sbjct: 118 VSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDL-LEMAEQVFEDMP 176
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
++ TWN M+ K + F+R++ ++ +LK VS ++ +
Sbjct: 177 FKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQ 236
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMT--DRFALNG---------R 217
LH K G + + V NSL+ Y CG+T A ++F+ D + N
Sbjct: 237 LHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSEN 296
Query: 218 PNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNA 277
P +AL LF M +G P+ T VS+L + + L GR++H L+K G + + NA
Sbjct: 297 PLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNA 356
Query: 278 LLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPG 337
L+D YAKCG++ +++ F + ++N+V W L+ G A N G P
Sbjct: 357 LIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPT 415
Query: 338 EITFVGVLYAC 348
E TF L +C
Sbjct: 416 EYTFSTALKSC 426
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 165/385 (42%), Gaps = 24/385 (6%)
Query: 48 KCISLLQYC--ASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFT 105
+ +SLL C A S + K +HA SI L P + I ++ +S A VF
Sbjct: 14 RVVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFD 73
Query: 106 MIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVRE 165
+ N ++NT+I+GY++ D A + +M P+ T LL SL+VR
Sbjct: 74 QMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCA--SLDVRA 131
Query: 166 GEALHSVTIKNG-FESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FA 213
G LH +++K G F + FV LL +Y E A +VFE M +
Sbjct: 132 GTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLG 191
Query: 214 LNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
G E + FRE+ G + + +L + + L++ +++H K GL +
Sbjct: 192 HRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEIS 251
Query: 274 VVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQK 333
VVN+L+ Y KCG+ A+++F + ++VSW +I A +
Sbjct: 252 VVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHG 311
Query: 334 LAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQA 393
+P + T+V VL S +L G M + G I ++D ++ G ++ +
Sbjct: 312 FSPNQGTYVSVLGVSSLVQLLSCG-RQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDS 370
Query: 394 ---YEYIQNMPVQPNAVIWRTLLGA 415
++YI++ N V W LL
Sbjct: 371 RLCFDYIRD----KNIVCWNALLSG 391
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 170/406 (41%), Gaps = 61/406 (15%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNP---NVFTWNTMIR 120
KQ+H + + G+ D ++ +++S H+ M ++ ++ +WN +I
Sbjct: 235 KQLHCSATKKGL-----DCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIIC 289
Query: 121 GYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFES 180
A+S++P AL + M P+ TY +L S + G +H + IKNG E+
Sbjct: 290 ATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCET 349
Query: 181 LVFVRNSLLHIYAACGDTESAHKVFESMTDR------FALNGRPNE----ALTLFREMSA 230
+ + N+L+ YA CG+ E + F+ + D+ L+G N+ L+LF +M
Sbjct: 350 GIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPICLSLFLQMLQ 409
Query: 231 NGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKC----- 285
G P +T + L +C EL +++H +++ G +N +V+++L+ YAK
Sbjct: 410 MGFRPTEYTFSTALKSCC---VTEL-QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMND 465
Query: 286 ---------------------------GSIREAQQVFGEMEERNVVSWTTLIVGLAVNGF 318
G E+ ++ +E+ + VSW I + + +
Sbjct: 466 ALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDY 525
Query: 319 GXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRM-KEEYGIAPRIEHY 377
+ P + TFV +L CS L G + K ++ A + +
Sbjct: 526 HEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCA---DTF 582
Query: 378 GC--MVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGH 421
C ++D+ + G ++ + + + N + W L+ IHG+
Sbjct: 583 VCNVLIDMYGKCGSIRSVMKVFEETR-EKNLITWTALISCLGIHGY 627
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 228/443 (51%), Gaps = 24/443 (5%)
Query: 103 VFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLN 162
+F + +V +W M+ G A++ A + M E + ++ ++ +++
Sbjct: 193 LFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMP----ERNIISWNAMITGYAQNNR 248
Query: 163 VREGEALHSVTIKNGFESLV-----FVRNSLLHIYAACG--DTESAHKV--FESMTDRFA 213
+ E + L V + F S F+RN ++ ACG D V + +M +
Sbjct: 249 IDEADQLFQVMPERDFASWNTMITGFIRNREMN--KACGLFDRMPEKNVISWTTMITGYV 306
Query: 214 LNGRPNEALTLFREMSANG-VEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENL 272
N EAL +F +M +G V+P+ T VS+LSAC++L L G+++H + K+ ++N
Sbjct: 307 ENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNE 366
Query: 273 HVVNALLDLYAKCGSIREAQQVF--GEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXX 330
V +ALL++Y+K G + A+++F G + +R+++SW ++I A +G G
Sbjct: 367 IVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMR 426
Query: 331 XQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLV 390
P +T++ +L+ACSH G++++G ++F+ + + + R EHY C+VDL RAG +
Sbjct: 427 KHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRL 486
Query: 391 KQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLY 450
K +I + + + +L AC +H +S+ + +L+ +G YVL+SN+Y
Sbjct: 487 KDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIY 546
Query: 451 ASERRWTDVQTIRKSMLQDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAXXXXXX 510
A+ + + +R M + G+KK PG S V++G + + F +GD+SHPQ + + +
Sbjct: 547 AANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDS------ 600
Query: 511 XXXXXXGYVPRTENVLADIEEEE 533
+ + +NV +D EE E
Sbjct: 601 ILSDLRNKMRKNKNVTSDAEEAE 623
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 108/211 (51%), Gaps = 19/211 (9%)
Query: 97 MSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMS-CVEPDTHTYPFLLK 155
M+ A +F + NV +W TMI GY E+++ + AL+ + +M V+P+ TY +L
Sbjct: 280 MNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILS 339
Query: 156 AVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE--------- 206
A S + EG+ +H + K+ + V ++LL++Y+ G+ +A K+F+
Sbjct: 340 ACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDL 399
Query: 207 ----SMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVY 262
SM +A +G EA+ ++ +M +G +P T ++LL AC+ G +E G
Sbjct: 400 ISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKD 459
Query: 263 LLKAG---LRENLHVVNALLDLYAKCGSIRE 290
L++ LRE + L+DL + G +++
Sbjct: 460 LVRDESLPLREEHYT--CLVDLCGRAGRLKD 488
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 140/374 (37%), Gaps = 67/374 (17%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRN-PNVFTWNTMIRGY 122
K A + G+P + H+I + L M A +F + + NV TW M+ GY
Sbjct: 61 KIAEARKLFDGLPERDVVTWTHVITGYIKL-GDMREARELFDRVDSRKNVVTWTAMVSGY 119
Query: 123 AESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLV 182
S+ A +++M P+ + +
Sbjct: 120 LRSKQLSIAEMLFQEM------PERNVVSW------------------------------ 143
Query: 183 FVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMSAN 231
N+++ YA G + A ++F+ M +R GR +EA+ LF M
Sbjct: 144 ---NTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR 200
Query: 232 GVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREA 291
V + +++ A+ G ++ RR L N+ NA++ YA+ I EA
Sbjct: 201 DV----VSWTAMVDGLAKNGKVDEARR----LFDCMPERNIISWNAMITGYAQNNRIDEA 252
Query: 292 QQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHC 351
Q+F M ER+ SW T+I G N + + I++ ++
Sbjct: 253 DQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNV----ISWTTMITGYVEN 308
Query: 352 GMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSR-AGLV--KQAYEYIQNMPVQPNAVI 408
+E + F +M + + P + Y ++ S AGLV +Q ++ I Q N ++
Sbjct: 309 KENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIV 368
Query: 409 WRTLLGACTIHGHL 422
LL + G L
Sbjct: 369 TSALLNMYSKSGEL 382
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 216 GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVV 275
G+ EA LF + E D T +++ +LG + R + + R+N+
Sbjct: 60 GKIAEARKLFDGLP----ERDVVTWTHVITGYIKLGDMREAREL---FDRVDSRKNVVTW 112
Query: 276 NALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLA 335
A++ Y + + A+ +F EM ERNVVSW T+I G A +G + +
Sbjct: 113 TAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI- 171
Query: 336 PGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPR--IEHYGCMVDLLSRAGLVKQA 393
+++ ++ A G +DE + F RM PR + + MVD L++ G V +A
Sbjct: 172 ---VSWNSMVKALVQRGRIDEAMNLFERM-------PRRDVVSWTAMVDGLAKNGKVDEA 221
Query: 394 YEYIQNMPVQPNAVIWRTLL 413
MP + N + W ++
Sbjct: 222 RRLFDCMP-ERNIISWNAMI 240
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 214/438 (48%), Gaps = 14/438 (3%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
+QIH +I GV +N + ++ L YA VF + + +V +WN +I +
Sbjct: 153 EQIHGNAICSGVSRYNLVVWNSVMDMYRRLGV-FDYALSVFLTMEDRDVVSWNCLILSCS 211
Query: 124 ESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVF 183
+S + + AL + M ++PD +T ++ S + +G+ ++ IK GF S
Sbjct: 212 DSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSI 271
Query: 184 VRNSLLHIYAACGDTESAHKVF-----------ESMTDRFALNGRPNEALTLFREMSANG 232
V + + +++ C + + K+F SM ++ + +AL LF
Sbjct: 272 VLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQS 331
Query: 233 VEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQ 292
V PD FT S+LS+ + L+ G VH ++K G + V +L+++Y K GS+ A
Sbjct: 332 VRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAM 390
Query: 293 QVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXX-XXXXXXQKLAPGEITFVGVLYACSHC 351
VF + + ++++ W T+I+GLA N Q L P +T +G+L AC +
Sbjct: 391 GVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYA 450
Query: 352 GMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRT 411
G ++EG F M++ +G+ P EHY C+++LL R G++ +A + +P +P++ IW
Sbjct: 451 GFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEP 510
Query: 412 LLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGV 471
+L A G L E +L+ EPK S Y++L +Y RW + +R +M + +
Sbjct: 511 ILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKL 570
Query: 472 KKTPGYSLVELGNRVYEF 489
K G S + + + V+ F
Sbjct: 571 KSAQGSSKISIESSVFSF 588
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 121/269 (44%), Gaps = 16/269 (5%)
Query: 103 VFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLN 162
+F + +V +WNTMI G + + + M + P T+ L V+
Sbjct: 92 LFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVT---C 148
Query: 163 VREGEALHSVTIKNGFESL-VFVRNSLLHIYAACGDTESAHKVFESMTDRFAL------- 214
VR GE +H I +G + V NS++ +Y G + A VF +M DR +
Sbjct: 149 VRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLIL 208
Query: 215 ----NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRE 270
+G AL F M ++PD +TV ++S C++L L G++ +K G
Sbjct: 209 SCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLS 268
Query: 271 NLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXX 330
N V+ A +D+++KC + ++ ++F E+E+ + V ++I + + G
Sbjct: 269 NSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAM 328
Query: 331 XQKLAPGEITFVGVLYACSHCGMLDEGFD 359
Q + P + TF VL + + MLD G D
Sbjct: 329 TQSVRPDKFTFSSVLSSMNAV-MLDHGAD 356
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 255 LGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLA 314
L + VH LL+AG + N L LY K GS+ A Q+F ++ ++N ++W + GL
Sbjct: 22 LAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLF 81
Query: 315 VNGF 318
NG+
Sbjct: 82 KNGY 85
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 135/487 (27%), Positives = 228/487 (46%), Gaps = 35/487 (7%)
Query: 128 PKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNS 187
PKP L Q T C ++ + K ++ SL V + +++ FV+
Sbjct: 13 PKPYLWSATQTTSRCFNSRAQSHNLITKTITSSL--------QDVLTRPIWQNRSFVQCR 64
Query: 188 LLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSAC 247
+ YA + + + D + EAL + + G D ++ L C
Sbjct: 65 RVSSYAQMVNNHQSVTI--ETFDALCKQVKIREALEVIDILEDKGYIVDFPRLLGLAKLC 122
Query: 248 AELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWT 307
E+ ALE R VH + R + H V +++Y+ C S +A VF EM +RN +W
Sbjct: 123 GEVEALEEARVVHDCITPLDAR-SYHTV---IEMYSGCRSTDDALNVFNEMPKRNSETWG 178
Query: 308 TLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEE 367
T+I LA NG G + P + F V +AC G ++EG +F M +
Sbjct: 179 TMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRD 238
Query: 368 YGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEI 427
YG+ +E Y ++++L+ G + +A ++++ M V+P+ +W TL+ C + G+L LG+
Sbjct: 239 YGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGDR 298
Query: 428 ARSHLLKLEP----KHSGDYVLLSNLYASERRWTDVQTIRK-SMLQDGVKKTPGYSLVEL 482
+ KL+ K S ++ + AS+ ++ +R M++D KK
Sbjct: 299 FAELIKKLDASRMSKESNAGLVAAK--ASDSAMEKLKELRYCQMIRDDPKK--------- 347
Query: 483 GNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLADIEEEEKEQALSYHS 542
R++EF GD SH + + G+VP T +EEEEKE+ L + S
Sbjct: 348 --RMHEFRAGDTSHLGTVSAF---RSLKVQMLDIGFVPATRVCFVTVEEEEKEEQLLFRS 402
Query: 543 EKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDREIVIRDRSRFHHFRGGK 602
K+A A ++N+ P+ V++N+R C D H K+IS + R ++ RD+ ++H ++ G
Sbjct: 403 NKLAFAHAIINSEARRPLTVLQNMRTCIDGHNTFKMISLITGRALIQRDKKKYHFYKNGV 462
Query: 603 CSCKDYW 609
CSCKDYW
Sbjct: 463 CSCKDYW 469
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 180/361 (49%), Gaps = 16/361 (4%)
Query: 92 SLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYP 151
++S A +F ++ N+ +WN M+ GY + + AL F M D T
Sbjct: 340 AMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLV 399
Query: 152 FLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMT-- 209
++L S +V+ G+ H ++G+++ V V N+LL +Y CG +SA+ F M+
Sbjct: 400 WILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSEL 459
Query: 210 -DRFALN---------GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRV 259
D + N GR +AL+ F M +P +T+ +LL+ CA + AL LG+ +
Sbjct: 460 RDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAI 518
Query: 260 HVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFG 319
H +L++ G + ++ + A++D+Y+KC A +VF E R+++ W ++I G NG
Sbjct: 519 HGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRS 578
Query: 320 XXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGC 379
+ + P +TF+G+L AC G ++ GF YF M +Y I+P++EHY C
Sbjct: 579 KEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDC 638
Query: 380 MVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLK---LE 436
M++L + G + Q E++ MP P + + AC + LG A L+ L+
Sbjct: 639 MIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLMNDHYLQ 698
Query: 437 P 437
P
Sbjct: 699 P 699
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 182/427 (42%), Gaps = 55/427 (12%)
Query: 39 ENPLPHVLTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMS 98
E VL C +L L+Q+H +++G N D+ ++ + MS
Sbjct: 162 ETSFAGVLKSCGLILDL-----RLLRQLHCAVVKYGYS-GNVDLETSIV-DVYGKCRVMS 214
Query: 99 YAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVS 158
A VF I NP+ +WN ++R Y E A+ + +M V P HT ++ A S
Sbjct: 215 DARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACS 274
Query: 159 KSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR------- 211
+SL + G+ +H++ +K + V S+ +Y C ESA +VF+ +
Sbjct: 275 RSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTS 334
Query: 212 ----FALNGRPNEALTLFREMSANGV-------------------------------EPD 236
+A++G EA LF M + D
Sbjct: 335 AMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENID 394
Query: 237 GFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFG 296
T+V +L+ C+ + +++G++ H ++ + G N+ V NALLD+Y KCG+++ A F
Sbjct: 395 NVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFR 454
Query: 297 EMEE-RNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLD 355
+M E R+ VSW L+ G+A G + P + T +L C++ L+
Sbjct: 455 QMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALN 513
Query: 356 EGFD-YFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLG 414
G + +++ Y I I G MVD+ S+ A E + + + ++W +++
Sbjct: 514 LGKAIHGFLIRDGYKIDVVIR--GAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSIIR 570
Query: 415 ACTIHGH 421
C +G
Sbjct: 571 GCCRNGR 577
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 151/348 (43%), Gaps = 23/348 (6%)
Query: 114 TWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVT 173
+WN +I A++ +R+M V ++ +LK+ L++R LH
Sbjct: 129 SWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAV 188
Query: 174 IKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTD-----------RFALNGRPNEAL 222
+K G+ V + S++ +Y C A +VF+ + + R+ G +EA+
Sbjct: 189 VKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAV 248
Query: 223 TLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLY 282
+F +M V P TV S++ AC+ ALE+G+ +H +K + + V ++ D+Y
Sbjct: 249 VMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMY 308
Query: 283 AKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFV 342
KC + A++VF + +++ SWT+ + G A++G + + +++
Sbjct: 309 VKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNI----VSWN 364
Query: 343 GVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDL-----LSRAGLVKQAYEYI 397
+L H DE D+ M++E I++ + L +S + KQA+ +I
Sbjct: 365 AMLGGYVHAHEWDEALDFLTLMRQEI---ENIDNVTLVWILNVCSGISDVQMGKQAHGFI 421
Query: 398 QNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVL 445
N ++ LL G L I + +L + S + +L
Sbjct: 422 YRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALL 469
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 118/282 (41%), Gaps = 45/282 (15%)
Query: 182 VFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMSA 230
+F+ N + Y CG + A ++FE M +R A NG +E +FR M+
Sbjct: 96 IFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNR 155
Query: 231 NGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIRE 290
+GV + +L +C + L L R++H ++K G N+ + +++D+Y KC + +
Sbjct: 156 DGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSD 215
Query: 291 AQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSH 350
A++VF E+ + VSW ++ GF + P T V+ ACS
Sbjct: 216 ARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSR 275
Query: 351 CGMLDEG----------------------FDYF---------RRMKEEYGIAPRIEHYGC 379
L+ G FD + RR+ ++ + ++ +
Sbjct: 276 SLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTR-SKDLKSWTS 334
Query: 380 MVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGH 421
+ + +GL ++A E MP + N V W +LG +H H
Sbjct: 335 AMSGYAMSGLTREARELFDLMP-ERNIVSWNAMLGG-YVHAH 374
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 75/182 (41%), Gaps = 24/182 (13%)
Query: 243 LLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERN 302
L +C+ + R+V +L+ + ++N ++ Y KCG + +A+++F EM ER+
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERD 126
Query: 303 VVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACS-----------HC 351
SW +I A NG + E +F GVL +C HC
Sbjct: 127 GGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHC 186
Query: 352 GMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRT 411
++ +YG + ++ +VD+ + ++ A + V P+ V W
Sbjct: 187 AVV------------KYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEI-VNPSDVSWNV 233
Query: 412 LL 413
++
Sbjct: 234 IV 235
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 190/429 (44%), Gaps = 18/429 (4%)
Query: 182 VFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMSANGVEPDGFTVV 241
+NS++ Y A V D + G EA+ + + G D ++
Sbjct: 64 TLTQNSMVGQYKTTVSPSVAQNVTIETFDSLCIQGNWREAVEVLDYLENKGYAMDLIRLL 123
Query: 242 SLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEER 301
L C + ALE R VH ++ ++ NA++++Y+ C S+ +A +VF EM E
Sbjct: 124 GLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEW 183
Query: 302 NVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYF 361
N + ++ NG+G + P F V C+ G + EG F
Sbjct: 184 NSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQF 243
Query: 362 RRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGH 421
+ M EYGI P +EHY + +L+ +G + +A +++ MP++P+ +W TL+ +HG
Sbjct: 244 QAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGD 303
Query: 422 LSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVE 481
+ LG+ + KL+ D V + L A++ D VKK P S
Sbjct: 304 VELGDRCAELVEKLDATRL-DKVSSAGLVATK-------------ASDFVKKEP--STRS 347
Query: 482 LGNRVYEFTMGDRSHPQSQDVYAXXXXXXXXXXXXGYVPRTENVLADIEE-EEKEQALSY 540
F D SHPQ +Y GYVP T + I E KEQ Y
Sbjct: 348 EPYFYSTFRPVDSSHPQMNIIYETLMSLRSQLKEMGYVPDTRYYRSLIMAMENKEQIFGY 407
Query: 541 HSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAIKLISKVYDREIVIRDRSRFHHFRG 600
E++A+ LL + P + I ++ N+R+ DCH +KL+S + R+++ RD +H F+
Sbjct: 408 R-EEIAVVESLLKSKPRSAITLLTNIRIVGDCHDMMKLMSVITGRDMIKRDAKIYHLFKN 466
Query: 601 GKCSCKDYW 609
G C C + W
Sbjct: 467 GVCRCNNLW 475
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 208/438 (47%), Gaps = 21/438 (4%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
KQ+H+ ++ G + N + L+ S +S + F + +V +WN+++ A
Sbjct: 233 KQLHSLVVKSGWNISNIFVANVLV-DYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCA 291
Query: 124 ESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFE-SLV 182
+ +L + +M P + L S++ +++ G+ +H +K GF+ S +
Sbjct: 292 DYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSL 351
Query: 183 FVRNSLLHIYAACGDTESAHKVFESMTDRFALN--------------GRPNEALTLFREM 228
V+++L+ +Y C E++ +++S+ LN G + + +F M
Sbjct: 352 HVQSALIDMYGKCNGIENSALLYQSLP---CLNLECCNSLMTSLMHCGITKDIIEMFGLM 408
Query: 229 SANGVEPDGFTVVSLLSACAEL--GALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCG 286
G D T+ ++L A + +L VH +K+G ++ V +L+D Y K G
Sbjct: 409 IDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSG 468
Query: 287 SIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLY 346
+++VF E++ N+ T++I G A NG G L P E+T + VL
Sbjct: 469 QNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLS 528
Query: 347 ACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNA 406
CSH G+++EG F ++ +YGI+P + Y CMVDLL RAGLV++A + +
Sbjct: 529 GCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADC 588
Query: 407 VIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSM 466
V W +LL +C IH + ++G A L+ LEP++ Y+ +S Y + + IR+
Sbjct: 589 VAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIA 648
Query: 467 LQDGVKKTPGYSLVELGN 484
+ + GYS V + N
Sbjct: 649 ASRELMREIGYSSVVVKN 666
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 122/289 (42%), Gaps = 23/289 (7%)
Query: 94 SAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFL 153
S + AH F + +V T+N +I G + A+ Y +M + T+P +
Sbjct: 59 SGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSV 118
Query: 154 LKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-- 211
L S L REG +H I GF +FVR++L+ +YA + A K+F+ M DR
Sbjct: 119 LSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNL 178
Query: 212 ---------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVY 262
F G ++ M GV +G T ++ C+ + G+++H
Sbjct: 179 AVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSL 238
Query: 263 LLKAGLR-ENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXX 321
++K+G N+ V N L+D Y+ CG + + + F + E++V+SW +++ A G
Sbjct: 239 VVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLD 298
Query: 322 XXXXXXXXXXQKLAPGEITFVGVLYACS-----------HCGMLDEGFD 359
P F+ L CS HC +L GFD
Sbjct: 299 SLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFD 347
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 104/253 (41%), Gaps = 12/253 (4%)
Query: 181 LVFVRNSLLHIYAACGDTESAHKVFESMTDRFALN-----------GRPNEALTLFREMS 229
LV+ N + G+ SAH+ F+ M+ R + G A+ L+ EM
Sbjct: 45 LVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMV 104
Query: 230 ANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIR 289
+ G+ T S+LS C++ G +VH ++ G N+ V +AL+ LYA +
Sbjct: 105 SCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVD 164
Query: 290 EAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACS 349
A ++F EM +RN+ L+ G + +A +T+ ++ CS
Sbjct: 165 VALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCS 224
Query: 350 HCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIW 409
H ++ EG + + I +VD S G + + +P + + + W
Sbjct: 225 HDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVP-EKDVISW 283
Query: 410 RTLLGACTIHGHL 422
+++ C +G +
Sbjct: 284 NSIVSVCADYGSV 296
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 195/420 (46%), Gaps = 33/420 (7%)
Query: 66 IHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAES 125
IH+ ++ G+ N +G LI + M A LVF + + +WN ++ + +
Sbjct: 178 IHSKLVKLGLEKGNVVVGNCLI-DMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRN 236
Query: 126 QDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVR 185
+ L F+ QM PDT TY L+ A KS + N F+ L +
Sbjct: 237 GKLELGLWFFHQMP----NPDTVTYNELIDAFVKSGD-----------FNNAFQVLSDMP 281
Query: 186 NSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLS 245
N ++ S + + + + + EA F +M ++GV D +++ +L+
Sbjct: 282 NP---------NSSSWNTILTGYVN----SEKSGEATEFFTKMHSSGVRFDEYSLSIVLA 328
Query: 246 ACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVS 305
A A L + G +H K GL + V +AL+D+Y+KCG ++ A+ +F M +N++
Sbjct: 329 AVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIV 388
Query: 306 WTTLIVGLAVNGFGXXXXXXXXXXXXQK-LAPGEITFVGVLYACSHCGM-LDEGFDYFRR 363
W +I G A NG ++ L P TF+ +L CSHC + ++ YF
Sbjct: 389 WNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEM 448
Query: 364 MKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLS 423
M EY I P +EH ++ + + G V QA + IQ + V WR LLGAC+ L
Sbjct: 449 MINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLK 508
Query: 424 LGEIARSHLLKLEPKHSGD--YVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGYSLVE 481
+ + +++L + Y+++SNLYA RW +V IRK M + GV K G S ++
Sbjct: 509 AAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWID 568
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 122/282 (43%), Gaps = 53/282 (18%)
Query: 144 EPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHK 203
+PD LL+ V LH K+GF S + NSL+ Y E AHK
Sbjct: 52 KPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHK 111
Query: 204 VFESMTD-----------RFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGA 252
VF+ M D + +GR E + LF E+ + V P+ F+ + L+ACA L
Sbjct: 112 VFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHL 171
Query: 253 LELGRRVHVYLLKAGLRE-NLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIV 311
LG +H L+K GL + N+ V N L+D+Y KCG + +A VF MEE++ VSW ++
Sbjct: 172 SPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVA 231
Query: 312 GLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIA 371
+CS G L+ G +F +M
Sbjct: 232 -----------------------------------SCSRNGKLELGLWFFHQMPN----- 251
Query: 372 PRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLL 413
P Y ++D ++G A++ + +MP PN+ W T+L
Sbjct: 252 PDTVTYNELIDAFVKSGDFNNAFQVLSDMP-NPNSSSWNTIL 292
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 159/404 (39%), Gaps = 64/404 (15%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
+Q+H + +HG + N + L+ S + AH VF + +P+V +WN+++ GY
Sbjct: 75 RQLHGYVTKHGF-VSNTRLSNSLM-RFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYV 132
Query: 124 ESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFE-SLV 182
+S + + + ++ S V P+ ++ L A ++ G +HS +K G E V
Sbjct: 133 QSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNV 192
Query: 183 FVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVS 242
V N L+ +Y CG + A VF+ M E D + +
Sbjct: 193 VVGNCLIDMYGKCGFMDDAVLVFQHME------------------------EKDTVSWNA 228
Query: 243 LLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERN 302
++++C+ G LELG ++ + N L+D + K G A QV +M N
Sbjct: 229 IVASCSRNGKLELG----LWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPN 284
Query: 303 VVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEIT---------------FVGVLYA 347
SW T++ G + + E + + +++A
Sbjct: 285 SSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHA 344
Query: 348 CSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAV 407
C+H + G+ R+ ++D+ S+ G++K A MP + N +
Sbjct: 345 CAH----------------KLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMP-RKNLI 387
Query: 408 IWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYA 451
+W ++ +G S+ I + LK E D NL A
Sbjct: 388 VWNEMISGYARNGD-SIEAIKLFNQLKQERFLKPDRFTFLNLLA 430
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 1/199 (0%)
Query: 227 EMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCG 286
E+ +G +PD +V LL G + L R++H Y+ K G N + N+L+ Y
Sbjct: 45 ELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSD 104
Query: 287 SIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLY 346
S+ +A +VF EM + +V+SW +L+ G +G + P E +F L
Sbjct: 105 SLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALA 164
Query: 347 ACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNA 406
AC+ + G ++ + + C++D+ + G + A Q+M + +
Sbjct: 165 ACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHME-EKDT 223
Query: 407 VIWRTLLGACTIHGHLSLG 425
V W ++ +C+ +G L LG
Sbjct: 224 VSWNAIVASCSRNGKLELG 242
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 175/373 (46%), Gaps = 17/373 (4%)
Query: 63 LKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGY 122
+K+IHA +++ G +LI + V L + YA VF + N TW MI GY
Sbjct: 101 IKRIHAMALK-CFDDQVIYFGNNLISSCVRL-GDLVYARKVFDSMPEKNTVTWTAMIDGY 158
Query: 123 AESQDPKPALHFYRQMTMSCVE-PDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESL 181
+ A + + + + LL S+ G +H +K G +L
Sbjct: 159 LKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNL 218
Query: 182 VFVRNSLLHIYAACGDTESAHKVFESMTDRFALN-----------GRPNEALTLFREMSA 230
+ V +SL++ YA CG+ SA + F+ M ++ ++ G +A+ +F M
Sbjct: 219 I-VESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLN 277
Query: 231 NGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIRE 290
+ P+ FTV S+L AC+E AL GR+VH ++K ++ ++ V +L+D+YAKCG I +
Sbjct: 278 HWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISD 337
Query: 291 AQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSH 350
++VF M RN V+WT++I A GFG + L +T V +L AC
Sbjct: 338 CRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGS 397
Query: 351 CGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWR 410
G L G + ++ + I + +V L + G + A+ +Q +P + + V W
Sbjct: 398 VGALLLGKELHAQIIKN-SIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSR-DVVSWT 455
Query: 411 TLLGACTIHGHLS 423
++ C+ GH S
Sbjct: 456 AMISGCSSLGHES 468
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 173/361 (47%), Gaps = 16/361 (4%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
+Q+H ++ GV N + L++ + ++ A F M+ +V +W +I +
Sbjct: 204 RQVHGNMVKVGVG--NLIVESSLVY-FYAQCGELTSALRAFDMMEEKDVISWTAVISACS 260
Query: 124 ESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVF 183
A+ + M P+ T +LKA S+ +R G +HS+ +K ++ VF
Sbjct: 261 RKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVF 320
Query: 184 VRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMSANG 232
V SL+ +YA CG+ KVF+ M++R A G EA++LFR M
Sbjct: 321 VGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRH 380
Query: 233 VEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQ 292
+ + TVVS+L AC +GAL LG+ +H ++K + +N+++ + L+ LY KCG R+A
Sbjct: 381 LIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAF 440
Query: 293 QVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCG 352
V ++ R+VVSWT +I G + G + + P T+ L AC++
Sbjct: 441 NVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSE 500
Query: 353 MLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTL 412
L G K+ + ++ + ++ + ++ G V +A+ +MP + N V W+ +
Sbjct: 501 SLLIGRSIHSIAKKNHALS-NVFVGSALIHMYAKCGFVSEAFRVFDSMP-EKNLVSWKAM 558
Query: 413 L 413
+
Sbjct: 559 I 559
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 153/320 (47%), Gaps = 16/320 (5%)
Query: 42 LPHVLTKCISLLQYCASSKHKL--KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSY 99
LP+ T C S+L+ C+ K +Q+H+ ++ + + +G L+ + + +S
Sbjct: 281 LPNEFTVC-SILKACSEEKALRFGRQVHSLVVKRMIKT-DVFVGTSLM-DMYAKCGEISD 337
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
VF + N N TW ++I +A + A+ +R M + + T +L+A
Sbjct: 338 CRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGS 397
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALN---- 215
+ G+ LH+ IKN E V++ ++L+ +Y CG++ A V + + R ++
Sbjct: 398 VGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAM 457
Query: 216 -------GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGL 268
G +EAL +EM GVEP+ FT S L ACA +L +GR +H K
Sbjct: 458 ISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHA 517
Query: 269 RENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXX 328
N+ V +AL+ +YAKCG + EA +VF M E+N+VSW +I+G A NGF
Sbjct: 518 LSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYR 577
Query: 329 XXXQKLAPGEITFVGVLYAC 348
+ + F +L C
Sbjct: 578 MEAEGFEVDDYIFATILSTC 597
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 106/214 (49%), Gaps = 15/214 (7%)
Query: 50 ISLLQYCASSKHKL--KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMI 107
+S+L+ C S L K++HA I++ + N +G L++ A V +
Sbjct: 389 VSILRACGSVGALLLGKELHAQIIKNSIE-KNVYIGSTLVWLYCKCGESRD-AFNVLQQL 446
Query: 108 RNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGE 167
+ +V +W MI G + AL F ++M VEP+ TY LKA + S ++ G
Sbjct: 447 PSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGR 506
Query: 168 ALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNG 216
++HS+ KN S VFV ++L+H+YA CG A +VF+SM ++ +A NG
Sbjct: 507 SIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNG 566
Query: 217 RPNEALTLFREMSANGVEPDGFTVVSLLSACAEL 250
EAL L M A G E D + ++LS C ++
Sbjct: 567 FCREALKLMYRMEAEGFEVDDYIFATILSTCGDI 600
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 138/319 (43%), Gaps = 26/319 (8%)
Query: 137 QMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACG 196
Q S + + Y L + + S +R + +H++ +K + +++ N+L+ G
Sbjct: 72 QDDSSSFDSERVDYALLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLG 131
Query: 197 DTESAHKVFES-----------MTDRFALNGRPNEALTLFREMSANGVE-PDGFTVVSLL 244
D A KVF+S M D + G +EA LF + +G+ + V LL
Sbjct: 132 DLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLL 191
Query: 245 SACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVV 304
+ C+ ELGR+VH ++K G+ NL V ++L+ YA+CG + A + F MEE++V+
Sbjct: 192 NLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVI 250
Query: 305 SWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFD----Y 360
SWT +I + G G P E T +L ACS L G
Sbjct: 251 SWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLV 310
Query: 361 FRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHG 420
+RM I + ++D+ ++ G + + M N V W +++ A H
Sbjct: 311 VKRM-----IKTDVFVGTSLMDMYAKCGEISDCRKVFDGMS-NRNTVTWTSIIAA---HA 361
Query: 421 HLSLGEIARSHLLKLEPKH 439
GE A S ++ +H
Sbjct: 362 REGFGEEAISLFRIMKRRH 380
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 75/93 (80%)
Query: 517 GYVPRTENVLADIEEEEKEQALSYHSEKVAIAFMLLNTAPGTPIRVMKNLRVCADCHMAI 576
GYVP T+ VL DI+EE KE+AL +HSE++AIAF ++NT PGT IRVMKNLR+C DCH I
Sbjct: 147 GYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRVMKNLRICGDCHNFI 206
Query: 577 KLISKVYDREIVIRDRSRFHHFRGGKCSCKDYW 609
K++S + DREI++RD RFHHFR G CSC DYW
Sbjct: 207 KILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 152/341 (44%), Gaps = 12/341 (3%)
Query: 64 KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYA 123
K++HA ++ + P + LI + M+ VF + N +W ++ GYA
Sbjct: 336 KEVHAHVLKSKNYVEQPFVHSGLI-DLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYA 394
Query: 124 ESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVF 183
+ AL M PD T +L ++ +++G+ +H +KN F V
Sbjct: 395 ANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVS 454
Query: 184 VRNSLLHIYAACGDTESAHKVFE-----------SMTDRFALNGRPNEALTLFREMSANG 232
+ SL+ +Y+ CG E ++F+ +M D + N + +FR M +
Sbjct: 455 LVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSK 514
Query: 233 VEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQ 292
PD T+ +L+ C++L AL+LG+ +H ++LK V ++ +Y KCG +R A
Sbjct: 515 HRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSAN 574
Query: 293 QVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCG 352
F + + ++WT +I N + P TF VL CS G
Sbjct: 575 FSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAG 634
Query: 353 MLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQA 393
+DE + +F M Y + P EHY +++LL+R G V++A
Sbjct: 635 FVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 19/333 (5%)
Query: 42 LPHVLTKCISLLQYCASSKHKL--KQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSY 99
+P T +LL+ C K L KQ+H +G L + + + + + + +
Sbjct: 107 IPVNATTFSALLEACVRRKSLLHGKQVHVHIRING--LESNEFLRTKLVHMYTACGSVKD 164
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPK--PALHFYRQMTMSCVEPDTHTYPFLLKAV 157
A VF + NV++WN ++RG S + L + +M V+ + ++ + K+
Sbjct: 165 AQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSF 224
Query: 158 SKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR------ 211
+ + +R+G H++ IKNG + VF++ SL+ +Y CG A +VF+ + +R
Sbjct: 225 AGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWG 284
Query: 212 -----FALNGRPNEALTLFREM-SANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLK 265
A N R EAL LFR M S + P+ + ++L ++ AL+LG+ VH ++LK
Sbjct: 285 AMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLK 344
Query: 266 A-GLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXX 324
+ E V + L+DLY KCG + ++VF ++RN +SWT L+ G A NG
Sbjct: 345 SKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALR 404
Query: 325 XXXXXXXQKLAPGEITFVGVLYACSHCGMLDEG 357
+ P +T VL C+ + +G
Sbjct: 405 SIVWMQQEGFRPDVVTIATVLPVCAELRAIKQG 437
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 155/348 (44%), Gaps = 21/348 (6%)
Query: 57 ASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRNPNVFTWN 116
AS+ + + HA +I++G L N K + + + A VF I ++ W
Sbjct: 227 ASALRQGLKTHALAIKNG--LFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWG 284
Query: 117 TMIRGYAESQDPKPALHFYRQM-TMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIK 175
MI G A ++ AL +R M + + P++ +L + ++ G+ +H+ +K
Sbjct: 285 AMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLK 344
Query: 176 N-GFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR-----------FALNGRPNEALT 223
+ + FV + L+ +Y CGD S +VF R +A NGR ++AL
Sbjct: 345 SKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALR 404
Query: 224 LFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYA 283
M G PD T+ ++L CAEL A++ G+ +H Y LK N+ +V +L+ +Y+
Sbjct: 405 SIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYS 464
Query: 284 KCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVG 343
KCG ++F +E+RNV +WT +I N K P +T
Sbjct: 465 KCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGR 524
Query: 344 VLYACSHCGMLDEGFD-YFRRMKEEYGIAPR-----IEHYGCMVDLLS 385
VL CS L G + + +K+E+ P I+ YG DL S
Sbjct: 525 VLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRS 572
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 145/330 (43%), Gaps = 19/330 (5%)
Query: 108 RNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGE 167
+NP + + I +A + + AL + + + T+ LL+A + ++ G+
Sbjct: 74 KNPYIIHRDIQI--FARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGK 131
Query: 168 ALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR--FALNG--------- 216
+H NG ES F+R L+H+Y ACG + A KVF+ T ++ N
Sbjct: 132 QVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISG 191
Query: 217 --RPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
R + L+ F EM GV+ + +++ ++ + A AL G + H +K GL ++ +
Sbjct: 192 KKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFL 251
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFG-XXXXXXXXXXXXQK 333
+L+D+Y KCG + A++VF E+ ER++V W +I GLA N +K
Sbjct: 252 KTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEK 311
Query: 334 LAPGEITFVGVLYACSHCGMLDEGFD-YFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQ 392
+ P + +L L G + + +K + + H G ++DL + G +
Sbjct: 312 IYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSG-LIDLYCKCGDMAS 370
Query: 393 AYEYIQNMPVQPNAVIWRTLLGACTIHGHL 422
Q NA+ W L+ +G
Sbjct: 371 GRRVFYGSK-QRNAISWTALMSGYAANGRF 399
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 128/266 (48%), Gaps = 17/266 (6%)
Query: 43 PHVLTKCISLLQYCASSK--HKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYA 100
P V+T ++L CA + + K+IH +++++ + L N + L+ P Y
Sbjct: 416 PDVVT-IATVLPVCAELRAIKQGKEIHCYALKN-LFLPNVSLVTSLMVMYSKCGVP-EYP 472
Query: 101 HLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKS 160
+F + NV W MI Y E+ D + + +R M +S PD+ T +L S
Sbjct: 473 IRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDL 532
Query: 161 LNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMT----------- 209
++ G+ LH +K FES+ FV ++ +Y CGD SA+ F+++
Sbjct: 533 KALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAII 592
Query: 210 DRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKA-GL 268
+ + N +A+ F +M + G P+ FT ++LS C++ G ++ R +L+ L
Sbjct: 593 EAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNL 652
Query: 269 RENLHVVNALLDLYAKCGSIREAQQV 294
+ + + +++L +CG + EAQ++
Sbjct: 653 QPSEEHYSLVIELLNRCGRVEEAQRL 678
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 151/329 (45%), Gaps = 50/329 (15%)
Query: 100 AHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSK 159
A F + +V +WN M+ GYA++ + AL + M V P+ T+ ++ A S
Sbjct: 217 ARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSF 276
Query: 160 SLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAAC------------------------ 195
+ +L + + FV+ +LL ++A C
Sbjct: 277 RADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNA 336
Query: 196 --------GDTESAHKVFESMTDR-----------FALNGRPNEALTLFREMSANG-VEP 235
GD SA ++F++M R +A NG+ A+ F +M G +P
Sbjct: 337 MISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKP 396
Query: 236 DGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVF 295
D T++S+LSAC + LELG + Y+ K ++ N +L+ +YA+ G++ EA++VF
Sbjct: 397 DEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVF 456
Query: 296 GEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLD 355
EM+ER+VVS+ TL A NG G + + P +T+ VL AC+ G+L
Sbjct: 457 DEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLK 516
Query: 356 EGFDYFRRMKEEYGIAPRIEHYGCMVDLL 384
EG F+ ++ P +HY CM DLL
Sbjct: 517 EGQRIFKSIRN-----PLADHYACM-DLL 539
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 115/484 (23%), Positives = 175/484 (36%), Gaps = 119/484 (24%)
Query: 46 LTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFT 105
LT ++ + A + +L QIHA I +I L AP Y L+F
Sbjct: 5 LTVSLAAIASQALTFPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFD 64
Query: 106 MIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVRE 165
+ PNVF N+M + +++ L Y Q + + PD ++P ++K+ R
Sbjct: 65 SVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAG-----RF 119
Query: 166 GEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALN---------- 215
G ++ K GF +VRN ++ +Y ESA KVF+ ++ R +
Sbjct: 120 GILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWK 179
Query: 216 -GRPNEALTLFREMSANGVEP-----DGFTVV----------------------SLLSAC 247
G EA LF M N V GF V ++LS
Sbjct: 180 WGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGY 239
Query: 248 AELGALELGRRVHVYLLKAGLRE-----------------------------------NL 272
A+ G E R+ +L+ G+R N
Sbjct: 240 AQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNC 299
Query: 273 HVVNALLDLYAKCGSIREAQQVFGE--------------------------------MEE 300
V ALLD++AKC I+ A+++F E M +
Sbjct: 300 FVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPK 359
Query: 301 RNVVSWTTLIVGLAVNG-FGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEG-- 357
RNVVSW +LI G A NG P E+T + VL AC H L+ G
Sbjct: 360 RNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDC 419
Query: 358 -FDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGAC 416
DY R+ + I Y ++ + +R G + +A M + + V + TL A
Sbjct: 420 IVDYIRKNQ----IKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK-ERDVVSYNTLFTAF 474
Query: 417 TIHG 420
+G
Sbjct: 475 AANG 478
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 139/334 (41%), Gaps = 33/334 (9%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P+ +T+NT+I + A + +M + D TY LL KS +E +
Sbjct: 277 PDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKV 336
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMS 229
+ + NGF + NSL+ YA +G +EA+ L +M+
Sbjct: 337 LNEMVLNGFSPSIVTYNSLISAYAR--------------------DGMLDEAMELKNQMA 376
Query: 230 ANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIR 289
G +PD FT +LLS G +E + + AG + N+ NA + +Y G
Sbjct: 377 EKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFT 436
Query: 290 EAQQVFGEME----ERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVL 345
E ++F E+ ++V+W TL+ NG P TF ++
Sbjct: 437 EMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLI 496
Query: 346 YACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMP---V 402
A S CG ++ +RRM + G+ P + Y ++ L+R G+ +Q+ + + M
Sbjct: 497 SAYSRCGSFEQAMTVYRRMLDA-GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRC 555
Query: 403 QPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLE 436
+PN + + +LL H + + EI H L E
Sbjct: 556 KPNELTYCSLL-----HAYANGKEIGLMHSLAEE 584
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 135/327 (41%), Gaps = 23/327 (7%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
+P++ T+N++I YA A+ QM +PD TY LL ++ V +
Sbjct: 346 SPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMS 405
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE---------------SMTDRFA 213
+ G + + N+ + +Y G K+F+ ++ F
Sbjct: 406 IFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG 465
Query: 214 LNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
NG +E +F+EM G P+ T +L+SA + G+ E V+ +L AG+ +L
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLS 525
Query: 274 VVNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXX 329
N +L A+ G ++++V EME+ N +++ +L+ A
Sbjct: 526 TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV 585
Query: 330 XXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGL 389
+ P + ++ CS C +L E F +KE G +P I MV + R +
Sbjct: 586 YSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKER-GFSPDITTLNSMVSIYGRRQM 644
Query: 390 VKQA---YEYIQNMPVQPNAVIWRTLL 413
V +A +Y++ P+ + +L+
Sbjct: 645 VAKANGVLDYMKERGFTPSMATYNSLM 671
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 138/361 (38%), Gaps = 35/361 (9%)
Query: 146 DTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVF 205
D ++ + K V + + ++GF V+ SL+ +A G A VF
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 206 ESMTDR---------------FALNGRP-NEALTLFREMSANGVEPDGFTVVSLLSACAE 249
+ M + F G P N+ +L +M ++G+ PD +T +L++ C
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKR 291
Query: 250 LGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEME----ERNVVS 305
+ +V + AG + NALLD+Y K +EA +V EM ++V+
Sbjct: 292 GSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVT 351
Query: 306 WTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMK 365
+ +LI A +G + P T+ +L G ++ F M+
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411
Query: 366 EEYGIAPRIEHYGCMVDLLSRAGLVKQA---YEYIQNMPVQPNAVIWRTLLGACTIHGHL 422
G P I + + + G + ++ I + P+ V W TLL +G
Sbjct: 412 NA-GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMD 470
Query: 423 S-----LGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGVKKTPGY 477
S E+ R+ + P+ L+S Y+ + T+ + ML GV TP
Sbjct: 471 SEVSGVFKEMKRAGFV---PERETFNTLIS-AYSRCGSFEQAMTVYRRMLDAGV--TPDL 524
Query: 478 S 478
S
Sbjct: 525 S 525
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 100/254 (39%), Gaps = 25/254 (9%)
Query: 43 PHVLTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHL 102
P+ LT C L Y + L A + GV + K L+ + S + A
Sbjct: 557 PNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVL-VCSKCDLLPEAER 615
Query: 103 VFTMIR----NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVS 158
F+ ++ +P++ T N+M+ Y Q A M P TY L+ S
Sbjct: 616 AFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHS 675
Query: 159 KSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRP 218
+S + + E + + G + + N++ IYA C +T R
Sbjct: 676 RSADFGKSEEILREILAKGIKPDIISYNTV--IYAYCRNT------------------RM 715
Query: 219 NEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNAL 278
+A +F EM +G+ PD T + + + A E V Y++K G R N + N++
Sbjct: 716 RDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSI 775
Query: 279 LDLYAKCGSIREAQ 292
+D Y K EA+
Sbjct: 776 VDGYCKLNRKDEAK 789
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 160/388 (41%), Gaps = 28/388 (7%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
NP+V+T N ++ +S + F ++M + PD T+ L+ + + +
Sbjct: 195 NPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSY 254
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------------FA 213
L K+G+ + N++LH Y G ++A ++ + M +
Sbjct: 255 LMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLC 314
Query: 214 LNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
+ R + L R+M + P+ T +L++ + G + + ++ +L GL N
Sbjct: 315 RSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHV 374
Query: 274 VVNALLDLYAKCGSIREAQQVFGEMEERNV----VSWTTLIVGLAVNGFGXXXXXXXXXX 329
NAL+D + G+ +EA ++F ME + + VS+ L+ GL N
Sbjct: 375 TFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 434
Query: 330 XXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGL 389
+ G IT+ G++ G LDE M ++ GI P I Y +++ + G
Sbjct: 435 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKD-GIDPDIVTYSALINGFCKVGR 493
Query: 390 VKQAYEY---IQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLL 446
K A E I + + PN +I+ TL+ C G L E R + + H+ D+
Sbjct: 494 FKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG--CLKEAIRIYEAMILEGHTRDHFTF 551
Query: 447 SNLYAS---ERRWTDVQTIRKSMLQDGV 471
+ L S + + + + M DG+
Sbjct: 552 NVLVTSLCKAGKVAEAEEFMRCMTSDGI 579
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 139/337 (41%), Gaps = 33/337 (9%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
+PN T+N +I G+ + K AL + M + P +Y LL + K+
Sbjct: 370 SPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARG 429
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREM 228
+ +NG C + M D NG +EA+ L EM
Sbjct: 430 FYMRMKRNG----------------VC----VGRITYTGMIDGLCKNGFLDEAVVLLNEM 469
Query: 229 SANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSI 288
S +G++PD T +L++ ++G + + + + + GL N + + L+ + G +
Sbjct: 470 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 529
Query: 289 REAQQVFGEM----EERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGV 344
+EA +++ M R+ ++ L+ L G + P ++F +
Sbjct: 530 KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL 589
Query: 345 LYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNM---P 401
+ + G + F F M + G P YG ++ L + G +++A ++++++ P
Sbjct: 590 INGYGNSGEGLKAFSVFDEM-TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 648
Query: 402 VQPNAVIWRTLLGACTIHGHLS-----LGEIARSHLL 433
+ V++ TLL A G+L+ GE+ + +L
Sbjct: 649 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 685
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 138/351 (39%), Gaps = 35/351 (9%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
+P++ T++ +I G+ + K A ++ + P+ Y L+ + ++E
Sbjct: 475 DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIR 534
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFAL----------NGRP 218
++ I G F N L+ G A + MT L NG
Sbjct: 535 IYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYG 594
Query: 219 N-----EALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
N +A ++F EM+ G P FT SLL + G L + L +
Sbjct: 595 NSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTV 654
Query: 274 VVNALLDLYAKCGSIREAQQVFGEMEERNVV----SWTTLIVGLAVNGFGXXXXXXXXXX 329
+ N LL K G++ +A +FGEM +R+++ ++T+LI GL G
Sbjct: 655 MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG----KTVIAILF 710
Query: 330 XXQKLAPGEITFVGVLYACSHCGMLDEG----FDYFRRMKEEYGIAPRIEHYGCMVDLLS 385
+ A G + V+Y C GM G YFR + G P I M+D S
Sbjct: 711 AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYS 770
Query: 386 RAGLVKQAYEYIQNMPVQ---PNAVIWRTLLGACTIHGHLSLGEIARSHLL 433
R G +++ + + M Q PN + LL HG+ +++ S LL
Sbjct: 771 RMGKIEKTNDLLPEMGNQNGGPNLTTYNILL-----HGYSKRKDVSTSFLL 816
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 128/346 (36%), Gaps = 38/346 (10%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
PN+ T+N ++ GY++ +D + YR + ++ + PD T L+ + +S + G +
Sbjct: 792 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 851
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMS 229
I C E F + + NG N A L + M+
Sbjct: 852 LKAFI--------------------CRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMT 891
Query: 230 ANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIR 289
+ G+ D T +++S + R V + K G+ L++ + G I+
Sbjct: 892 SLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIK 951
Query: 290 EAQQVFGEMEERNV----VSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVL 345
A V EM + V+ + ++ LA G KL P +F ++
Sbjct: 952 TAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 1011
Query: 346 YACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPN 405
+ C G + E + R + G+ + Y ++ L G + A+E + M
Sbjct: 1012 HLCCKNGNVIEALE-LRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDG- 1069
Query: 406 AVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYA 451
L T + L G +AR E SG ++L +L A
Sbjct: 1070 ------FLANATTYKALIRGLLAR------ETAFSGADIILKDLLA 1103
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 25/299 (8%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
+P+V+T+N++I G + + K A+ QM P+T TY L+ + K V E
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREM 228
L V G V NSL I C H+V A+ LF EM
Sbjct: 387 LARVLTSKGILPDVCTFNSL--IQGLC--LTRNHRV----------------AMELFEEM 426
Query: 229 SANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSI 288
+ G EPD FT L+ + G L+ + + +G ++ N L+D + K
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
Query: 289 REAQQVFGEME----ERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGV 344
REA+++F EME RN V++ TLI GL + + P + T+ +
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
Query: 345 LYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQ 403
L G + + D + M G P I YG ++ L +AG V+ A + ++++ ++
Sbjct: 547 LTHFCRGGDIKKAADIVQAMTSN-GCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/387 (20%), Positives = 152/387 (39%), Gaps = 25/387 (6%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P+ +N M+ + K + +M++ ++PD T+ L+KA+ ++ +R +
Sbjct: 152 PDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILM 211
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTD---------------RFAL 214
G +++ Y GD + A ++ E M + F
Sbjct: 212 LEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCK 271
Query: 215 NGRPNEALTLFREMS-ANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
GR +AL +EMS +G PD +T +L++ + G ++ + +L+ G +++
Sbjct: 272 EGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVY 331
Query: 274 VVNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXX 329
N+++ K G ++EA +V +M R N V++ TLI L
Sbjct: 332 TYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL 391
Query: 330 XXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGL 389
+ + P TF ++ + F M+ + G P Y ++D L G
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK-GCEPDEFTYNMLIDSLCSKGK 450
Query: 390 VKQAYEYIQNMPVQPNA---VIWRTLL-GACTIHGHLSLGEIARSHLLKLEPKHSGDYVL 445
+ +A ++ M + A + + TL+ G C + EI + ++S Y
Sbjct: 451 LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNT 510
Query: 446 LSNLYASERRWTDVQTIRKSMLQDGVK 472
L + RR D + M+ +G K
Sbjct: 511 LIDGLCKSRRVEDAAQLMDQMIMEGQK 537
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 26/214 (12%)
Query: 111 NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALH 170
+V T+NT+I G+ ++ + A + +M + V ++ TY L+ + KS V + L
Sbjct: 469 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 528
Query: 171 SVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMSA 230
I G + + NSLL + GD + A + ++MT +
Sbjct: 529 DQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMT--------------------S 568
Query: 231 NGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIRE 290
NG EPD T +L+S + G +E+ ++ + G+ H N ++ + E
Sbjct: 569 NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTE 628
Query: 291 AQQVFGEMEERN-----VVSWTTLIVGLAVNGFG 319
A +F EM E+N VS+ + GL NG G
Sbjct: 629 AINLFREMLEQNEAPPDAVSYRIVFRGLC-NGGG 661
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 138/334 (41%), Gaps = 23/334 (6%)
Query: 111 NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALH 170
N++T N MI + A ++ EPDT T+ L+K + V E L
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 181
Query: 171 SVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------------FALN 215
++NG + V NS+++ GDT A + M +R +
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241
Query: 216 GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVV 275
G + A++LF+EM G++ T SL+ + G G + ++ + N+
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITF 301
Query: 276 NALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXXX 331
N LLD++ K G ++EA +++ EM R N++++ TL+ G +
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Query: 332 QKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVK 391
K +P +TF ++ +D+G FR + + G+ Y +V ++G +K
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKR-GLVANAVTYSILVQGFCQSGKIK 420
Query: 392 QAYEYIQNM---PVQPNAVIWRTLLGACTIHGHL 422
A E Q M V P+ + + LL +G L
Sbjct: 421 LAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 153/400 (38%), Gaps = 66/400 (16%)
Query: 102 LVFTMIRN---PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVS 158
LV M+ N P+V T+N+++ G S D AL R+M V+ D TY ++ ++
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239
Query: 159 KSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR------- 211
+ + +L G +S V NSL+ G + + M R
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI 299
Query: 212 --------FALNGRPNEALTLFREMSANGVEP---------DGF---------------- 238
F G+ EA L++EM G+ P DG+
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359
Query: 239 ----------TVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSI 288
T SL+ + ++ G +V + K GL N + L+ + + G I
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419
Query: 289 REAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGV 344
+ A+++F EM +V+++ L+ GL NG K+ G + + +
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 479
Query: 345 LYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQ- 403
+ G +++ ++ F + + G+ P + Y M+ L + G + +A ++ M
Sbjct: 480 IEGMCKGGKVEDAWNLFCSLPCK-GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Query: 404 --PNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSG 441
PN + TL I HL G++ S L E K G
Sbjct: 539 NAPNDCTYNTL-----IRAHLRDGDLTASAKLIEEMKSCG 573
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 152/352 (43%), Gaps = 25/352 (7%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
PN+ T ++++ GY S+ A+ QM ++ +P+T T+ L+ + E AL
Sbjct: 149 PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMAL 208
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHK---------------VFESMTDRFAL 214
+ G + + +++ GDT+ A ++ ++ D
Sbjct: 209 IDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCK 268
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
++AL LF+EM G+ P+ T SL+S G R+ +++ + ++
Sbjct: 269 YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT 328
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXX 330
+AL+D + K G + EA++++ EM +R ++V++++LI G ++
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 388
Query: 331 XQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLV 390
+ P +T+ ++ ++EG + FR M + G+ Y ++ L +AG
Sbjct: 389 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR-GLVGNTVTYNILIQGLFQAGDC 447
Query: 391 KQAYEYIQNM---PVQPNAVIWRTLLGACTIHGHLSLGEIARSHLL--KLEP 437
A E + M V PN + + TLL +G L + +L K+EP
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 94/228 (41%), Gaps = 19/228 (8%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
NP+VFT++ +I + + A Y +M ++P TY L+ + E +
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALN------------- 215
+ + V N+L+ + E +VF M+ R +
Sbjct: 383 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 442
Query: 216 --GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
G + A +F+EM ++GV P+ T +LL + G LE V YL ++ + ++
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502
Query: 274 VVNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNG 317
N +++ K G + + +F + + +VV++ T+I G G
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG 550
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 107/269 (39%), Gaps = 20/269 (7%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
+P++ T++++I G+ A + M PD TY L+K K V EG
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMT---------------DRFA 213
+ + G N L+ GD + A ++F+ M D
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477
Query: 214 LNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
NG+ +A+ +F + + +EP +T ++ + G +E G + L G++ ++
Sbjct: 478 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 537
Query: 274 VVNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXX 329
N ++ + + GS EA +F EM+E N + TLI +G
Sbjct: 538 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Query: 330 XXQKLAPGEITFVGVLYACSHCGMLDEGF 358
A G+ + +G++ H G LD+ F
Sbjct: 598 RSCGFA-GDASTIGLVTNMLHDGRLDKSF 625
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 106/267 (39%), Gaps = 26/267 (9%)
Query: 179 ESLVFVR--NSLLHIYAACGDTESAHKVFESMT---------------DRFALNGRP-NE 220
E L+ VR ++LH Y+ G E A +FE M D F GR +
Sbjct: 205 EYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRK 264
Query: 221 ALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLD 280
L + EM + G++ D FT ++LSACA G L + L G NALL
Sbjct: 265 ILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQ 324
Query: 281 LYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAP 336
++ K G EA V EMEE + V++ L+ GF + + P
Sbjct: 325 VFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMP 384
Query: 337 GEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEY 396
IT+ V+ A G DE F MKE G P Y ++ LL + + +
Sbjct: 385 NAITYTTVIDAYGKAGKEDEALKLFYSMKEA-GCVPNTCTYNAVLSLLGKKSRSNEMIKM 443
Query: 397 IQNMP---VQPNAVIWRTLLGACTIHG 420
+ +M PN W T+L C G
Sbjct: 444 LCDMKSNGCSPNRATWNTMLALCGNKG 470
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 93/227 (40%), Gaps = 19/227 (8%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P T+N +++ + ++ AL ++M + D+ TY L+ A ++ +E +
Sbjct: 314 PGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGV 373
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------------FAL 214
+ K G +++ Y G + A K+F SM +
Sbjct: 374 IEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGK 433
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
R NE + + +M +NG P+ T ++L+ C G + RV + G +
Sbjct: 434 KSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDT 493
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEERN----VVSWTTLIVGLAVNG 317
N L+ Y +CGS +A +++GEM V ++ L+ LA G
Sbjct: 494 FNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKG 540
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 126/314 (40%), Gaps = 34/314 (10%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
PN T+ T+I Y ++ AL + M + P+T TY +L + K E +
Sbjct: 384 PNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKM 443
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMS 229
NG N++L A CG +K + +R +FREM
Sbjct: 444 LCDMKSNGCSPNRATWNTML---ALCG-----NKGMDKFVNR------------VFREMK 483
Query: 230 ANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIR 289
+ G EPD T +L+SA G+ +++ + +AG + NALL+ A+ G R
Sbjct: 484 SCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWR 543
Query: 290 EAQQVFGEMEERNV----VSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVL 345
+ V +M+ + S++ ++ A G ++ P + +L
Sbjct: 544 SGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLL 603
Query: 346 YACSHCGML---DEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQA---YEYIQN 399
A C L + F F++ +G P + + M+ + +R + QA E I+
Sbjct: 604 LANFKCRALAGSERAFTLFKK----HGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIRE 659
Query: 400 MPVQPNAVIWRTLL 413
+ P+ V + +L+
Sbjct: 660 DGLSPDLVTYNSLM 673
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 106/277 (38%), Gaps = 21/277 (7%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
N V T+N ++ A D + + M +P +Y +L+ +K N E
Sbjct: 523 NACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIER 582
Query: 169 LHSVTIKNG--FESLVFVRNSLLHIYA--ACGDTESAHK------------VFESMTDRF 212
+ + IK G F S + +R LL + A +E A +F SM F
Sbjct: 583 IEN-RIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIF 641
Query: 213 ALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENL 272
N ++A + + +G+ PD T SL+ G + L K+ L+ +L
Sbjct: 642 TRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDL 701
Query: 273 HVVNALLDLYAKCGSIREAQQVFGEMEERNV----VSWTTLIVGLAVNGFGXXXXXXXXX 328
N ++ + + G ++EA ++ EM ER + ++ T + G G
Sbjct: 702 VSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIEC 761
Query: 329 XXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMK 365
P E+TF V+ G E D+ ++K
Sbjct: 762 MAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIK 798
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/312 (18%), Positives = 114/312 (36%), Gaps = 21/312 (6%)
Query: 109 NPNVFTWNTMIRGYAE-SQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGE 167
+P + T+N ++ + + + + L +M ++ D T +L A ++ +RE +
Sbjct: 242 SPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAK 301
Query: 168 ALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------------F 212
+ G+E N+LL ++ G A V + M + +
Sbjct: 302 EFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAY 361
Query: 213 ALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENL 272
G EA + M+ GV P+ T +++ A + G + ++ + +AG N
Sbjct: 362 VRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNT 421
Query: 273 HVVNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXX 328
NA+L L K E ++ +M+ N +W T++ G
Sbjct: 422 CTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFRE 481
Query: 329 XXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAG 388
P TF ++ A CG + + M G + Y +++ L+R G
Sbjct: 482 MKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRA-GFNACVTTYNALLNALARKG 540
Query: 389 LVKQAYEYIQNM 400
+ I +M
Sbjct: 541 DWRSGENVISDM 552
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/415 (20%), Positives = 169/415 (40%), Gaps = 30/415 (7%)
Query: 68 AFSIRHGVPLHNPDMGKHLIFTIVSLSAPMS---YAHLVFTMIRNPNVFTWNTMIRGYAE 124
A+++ + HN L+++I+ + S Y + + + T+N +I A
Sbjct: 150 AYAVVSWLQKHNLCFSYELLYSILIHALGRSEKLYEAFLLSQKQTLTPLTYNALIGACAR 209
Query: 125 SQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFV 184
+ D + AL+ +M + D Y +++++++S N +S++ +
Sbjct: 210 NNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRS---------------NKIDSVMLL 254
Query: 185 RNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLL 244
R L+ E ++ + FA +G P++AL L A G+ T+VS++
Sbjct: 255 R---LYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSII 311
Query: 245 SACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVV 304
SA A+ G + L ++G++ NALL Y K G +++A+ + EME+R V
Sbjct: 312 SALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVS 371
Query: 305 ----SWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDY 360
+++ LI G + P F +L G + F
Sbjct: 372 PDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQV 431
Query: 361 FRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNM---PVQPNAVIWRTLLGACT 417
+ MK G+ P + Y ++D + + A M ++P+ V W TL+
Sbjct: 432 LKEMK-SIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHC 490
Query: 418 IHG-HLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDGV 471
HG H+ E+ + + + Y ++ N Y + RW D++ + M G+
Sbjct: 491 KHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGI 545
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/328 (19%), Positives = 127/328 (38%), Gaps = 23/328 (7%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P +N +++GY ++ K A +M V PD HTY L+ A + +
Sbjct: 337 PRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIV 396
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMT---------------DRFAL 214
+ FV + LL + G+ + +V + M D F
Sbjct: 397 LKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGK 456
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
+ A+T F M + G+EPD T +L+ + G + + + + G
Sbjct: 457 FNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATT 516
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXX 330
N +++ Y + +++ G+M+ + NVV+ TTL+ +G
Sbjct: 517 YNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMK 576
Query: 331 XQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLV 390
L P + ++ A + G+ ++ + FR M + G+ P + +++
Sbjct: 577 SVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSD-GLKPSLLALNSLINAFGEDRRD 635
Query: 391 KQAYEYIQNMP---VQPNAVIWRTLLGA 415
+A+ +Q M V+P+ V + TL+ A
Sbjct: 636 AEAFAVLQYMKENGVKPDVVTYTTLMKA 663
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 128/307 (41%), Gaps = 21/307 (6%)
Query: 110 PNVFTWNTMIRGYAES-QDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
PN+ T+N +I + + K F+ +M + V+PD T+ LL S+
Sbjct: 301 PNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARN 360
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESM---------------TDRFA 213
L E VF N+LL G + A ++ M D FA
Sbjct: 361 LFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFA 420
Query: 214 LNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
GR +EAL LF EM G+ D + +LLS ++G E + + G+++++
Sbjct: 421 KAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVV 480
Query: 274 VVNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXX 329
NALL Y K G E ++VF EM+ N+++++TLI G + G
Sbjct: 481 TYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF 540
Query: 330 XXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGL 389
L + + ++ A G++ M +E GI+P + Y ++D R+
Sbjct: 541 KSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE-GISPNVVTYNSIIDAFGRSAT 599
Query: 390 VKQAYEY 396
+ ++ +Y
Sbjct: 600 MDRSADY 606
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 109/244 (44%), Gaps = 16/244 (6%)
Query: 204 VFESMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVY- 262
F ++ + +G EA+++F M G+ P+ T +++ AC + G +E + +
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGK-GGMEFKQVAKFFD 328
Query: 263 -LLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEME----ERNVVSWTTLIVGLAVNG 317
+ + G++ + N+LL + ++ G A+ +F EM E++V S+ TL+ + G
Sbjct: 329 EMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGG 388
Query: 318 FGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHY 377
+++ P +++ V+ + G DE + F M+ GIA Y
Sbjct: 389 QMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR-YLGIALDRVSY 447
Query: 378 GCMVDLLSRAGLVKQAYEYIQNMP---VQPNAVIWRTLLGACTIHGHLS-----LGEIAR 429
++ + ++ G ++A + ++ M ++ + V + LLG G E+ R
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507
Query: 430 SHLL 433
H+L
Sbjct: 508 EHVL 511
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 142/346 (41%), Gaps = 29/346 (8%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
PN++T+N M+ GY + + + A + ++ + ++PD TY L+ + ++ +
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTD---------------RFAL 214
+ G L+H + A +F M D
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
+ R +EAL L +EM G++P+ T L+ + E R + +L+ GL N+
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXX 330
NAL++ Y K G I +A V ME R N ++ LI G +
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNKML 454
Query: 331 XQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLV 390
+K+ P +T+ ++ G D + M + G+ P Y M+D L ++ V
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDR-GLVPDQWTYTSMIDSLCKSKRV 513
Query: 391 KQA---YEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLL 433
++A ++ ++ V PN V++ L I G+ G++ +HL+
Sbjct: 514 EEACDLFDSLEQKGVNPNVVMYTAL-----IDGYCKAGKVDEAHLM 554
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/349 (19%), Positives = 135/349 (38%), Gaps = 44/349 (12%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P+V T+N++I G S + A M + PD TY ++ ++ KS V E L
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFAL--------------- 214
+ G V + +L+ Y G + AH + E M + L
Sbjct: 520 FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCA 579
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
+G+ EA L +M G++P T L+ + G + +L +G + + H
Sbjct: 580 DGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHT 639
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEERNV----VSWTTLIVGLAVNGFGXXXXXXXXXXX 330
+ Y + G + +A+ + +M E V ++++LI G G
Sbjct: 640 YTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMR 699
Query: 331 XQKLAPGEITFVGVLY----------------ACSHCGMLDEGFDYFRRMKE---EYGIA 371
P + TF+ ++ C+ M++ FD + E E+ +
Sbjct: 700 DTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMME--FDTVVELLEKMVEHSVT 757
Query: 372 PRIEHYGCMVDLLSRAG---LVKQAYEYIQ-NMPVQPNAVIWRTLLGAC 416
P + Y ++ + G + ++ ++++Q N + P+ +++ LL C
Sbjct: 758 PNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCC 806
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 133/368 (36%), Gaps = 42/368 (11%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
+PN T+N +I+GY +S K A+ +M V PD TY L+ +S N
Sbjct: 425 SPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFES---------------MTDRFA 213
L S+ G + S++ E A +F+S + D +
Sbjct: 484 LLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYC 543
Query: 214 LNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
G+ +EA + +M + P+ T +L+ G L+ + ++K GL+ +
Sbjct: 544 KAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVS 603
Query: 274 VVNALLDLYAKCGSIREA----QQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXX 329
L+ K G A QQ+ + + ++TT I G
Sbjct: 604 TDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM 663
Query: 330 XXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKE--------------------EYG 369
++P T+ ++ G + FD +RM++ +YG
Sbjct: 664 RENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYG 723
Query: 370 IAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTL-LGACTIHGHLSLGEIA 428
E C + + V + E + V PNA + L LG C + G+L + E
Sbjct: 724 KQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEV-GNLRVAEKV 782
Query: 429 RSHLLKLE 436
H+ + E
Sbjct: 783 FDHMQRNE 790
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 146/365 (40%), Gaps = 59/365 (16%)
Query: 94 SAPMSYAHLVFTMIRNPNVF---TWNTMIRGYAESQ---------DPKPALHFYRQMTMS 141
S MS H + +++ PN + +M+ + S DPK AL+F ++ +
Sbjct: 57 SDSMSVPHRLLSILSKPNWHKSPSLKSMVSAISPSHVSSLFSLDLDPKTALNFSHWISQN 116
Query: 142 C-VEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVF-VRNSLLHIYAACGDT- 198
+ ++Y LL ++ I NG+ +VF +R ++ + GD
Sbjct: 117 PRYKHSVYSYASLL----------------TLLINNGYVGVVFKIRLLMIKSCDSVGDAL 160
Query: 199 ---------------ESAHKV----FESMTDRFALNGRPNEALTLFREMSANGVEPDGFT 239
E +K+ + ++ + A G +E ++ EM + V P+ +T
Sbjct: 161 YVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYT 220
Query: 240 VVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEME 299
+++ +LG +E + +++AGL + +L+ Y + + A +VF EM
Sbjct: 221 YNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMP 280
Query: 300 ----ERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLD 355
RN V++T LI GL V + P T+ ++ +
Sbjct: 281 LKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKS 340
Query: 356 EGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNM---PVQPNAVIWRTL 412
E + + M EE GI P I Y ++D L ++A E + M + PN + + L
Sbjct: 341 EALNLVKEM-EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNAL 399
Query: 413 L-GAC 416
+ G C
Sbjct: 400 INGYC 404
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 144/354 (40%), Gaps = 30/354 (8%)
Query: 93 LSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPF 152
+S ++ + M P+ T+ T++ G + A+ +M + +PD TY
Sbjct: 151 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 210
Query: 153 LLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRF 212
++ + K GE ++ + N E G E+ ++ ++ D
Sbjct: 211 VINGLCK-----RGEPDLALNLLNKMEK---------------GKIEADVVIYSTVIDSL 250
Query: 213 ALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENL 272
++AL LF EM G+ PD FT SL+S G R+ +L+ + N+
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV 310
Query: 273 HVVNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXX 328
N+L+D +AK G + EA+++F EM +R N+V++ +LI G ++
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 329 XXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAG 388
+ P +T+ ++ + +G + FR M G+ Y ++ +A
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR-GLVGNTVTYTTLIHGFFQAS 429
Query: 389 LVKQAYEYIQNM---PVQPNAVIWRTLLGACTIHGHLSLGEIARSHLL--KLEP 437
A + M V PN + + TLL +G L + +L K+EP
Sbjct: 430 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 109/269 (40%), Gaps = 20/269 (7%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
+PN+ T+N++I G+ A + M PD TY L+ K+ V +G
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMT---------------DRFA 213
L + G +L+H + D ++A VF+ M D
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461
Query: 214 LNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
NG+ +A+ +F + + +EPD +T + + G +E G + L G++ ++
Sbjct: 462 KNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 521
Query: 274 VVNALLDLYAKCGSIREAQQVFGEMEERNVV----SWTTLIVGLAVNGFGXXXXXXXXXX 329
N ++ + K G EA +F +M+E + ++ TLI +G
Sbjct: 522 AYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Query: 330 XXQKLAPGEITFVGVLYACSHCGMLDEGF 358
+ A G+ + G++ H G LD+GF
Sbjct: 582 RSCRFA-GDASTYGLVTDMLHDGRLDKGF 609
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 97/229 (42%), Gaps = 19/229 (8%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
NPNV T+N++I +A+ A + +M ++P+ TY L+ + E +
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------------FA 213
+ ++ + V N+L++ + ++F M+ R F
Sbjct: 367 IFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFF 426
Query: 214 LNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
+ A +F++M ++GV P+ T +LL + G LE V YL K+ + +++
Sbjct: 427 QASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIY 486
Query: 274 VVNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGF 318
N + + K G + + +F + + +V+++ T+I G G
Sbjct: 487 TYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGL 535
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/388 (19%), Positives = 155/388 (39%), Gaps = 30/388 (7%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P++ ++ ++ A+ + + F +M + V + +TY ++ + + + A+
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------------FAL 214
+K G+ + NSLL+ + A + + M +
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 182
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
+ + +EA+ L M G +PD T ++++ + G +L + + K + ++ +
Sbjct: 183 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 242
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXX 330
+ ++D K + +A +F EM+ + +V ++++LI L G
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 331 XQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYG------CMVDLL 384
+K+ P +TF ++ A + G L E F M + I P I Y CM D L
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR-SIDPNIVTYNSLINGFCMHDRL 361
Query: 385 SRAGLVKQAYEYIQNMPVQPNAVIWRTLL-GACTIHGHLSLGEIARSHLLKLEPKHSGDY 443
A +Q + + + P+ V + TL+ G C + E+ R + ++ Y
Sbjct: 362 DEA---QQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY 418
Query: 444 VLLSNLYASERRWTDVQTIRKSMLQDGV 471
L + + + Q + K M+ DGV
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSDGV 446
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 160/396 (40%), Gaps = 36/396 (9%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
+PNV T+ +I+G + A Y Q+ +EP TY L+ K N+R G A
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHK---------------VFESMTDRFA 213
L+ IK G+ V + L+ + G A + VF S+ D +
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Query: 214 LNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGAL------ELGRRVHVYLLKAG 267
R +EAL +FR M G++PD T +++ A +G ++ + +
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNK 567
Query: 268 LRENLHVVNALLDLYAKCGSIREAQQVF-----GEMEERNVVSWTTLIVGLAVNGFGXXX 322
+ ++ V N ++ L KC I +A + F G+ME ++V++ T+I G
Sbjct: 568 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP-DIVTYNTMICGYCSLRRLDEA 626
Query: 323 XXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVD 382
P +T +++ +D F M E+ G P YGC++D
Sbjct: 627 ERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK-GSKPNAVTYGCLMD 685
Query: 383 LLSRAGLVK---QAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKH 439
S++ ++ + +E +Q + P+ V + ++ G + E ++ K
Sbjct: 686 WFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD--EATNIFHQAIDAKL 743
Query: 440 SGD---YVLLSNLYASERRWTDVQTIRKSMLQDGVK 472
D Y +L Y R + + + ML++GVK
Sbjct: 744 LPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 779
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 135/309 (43%), Gaps = 26/309 (8%)
Query: 135 YRQMTMSCVEPD-THTYPFLLKAVSKSLNVREGEALHSVTIKNGFE-------------- 179
+ ++ +EP + F+L A+ V + H + ++ GF
Sbjct: 204 FDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS 263
Query: 180 -SLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMSANGVEPDGF 238
+ V + LL + CG + F ++ + F G + A LF+ M G+EPD
Sbjct: 264 VDQIEVASRLLSLVLDCGPAPNV-VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLI 322
Query: 239 TVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEM 298
+L+ + G L +G ++ L G++ ++ V ++ +D+Y K G + A V+ M
Sbjct: 323 AYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM 382
Query: 299 EER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGML 354
+ NVV++T LI GL +G + + P +T+ ++ CG L
Sbjct: 383 LCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 355 DEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNM---PVQPNAVIWRT 411
GF + M + G P + YG +VD LS+ GL+ A + M ++ N V++ +
Sbjct: 443 RSGFALYEDMI-KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNS 501
Query: 412 LL-GACTIH 419
L+ G C ++
Sbjct: 502 LIDGWCRLN 510
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 110/272 (40%), Gaps = 25/272 (9%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
PNV T+ T+I G+ + + A ++ M +EPD Y L+ K+ + G L
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMS 229
S + G + V V +S + +Y GD +A V ++ M
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVV--------------------YKRML 383
Query: 230 ANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIR 289
G+ P+ T L+ + G + ++ +LK G+ ++ ++L+D + KCG++R
Sbjct: 384 CQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 290 EAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVL 345
++ +M + +VV + L+ GL+ G Q + + F ++
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Query: 346 YACSHCGMLDEGFDYFRRMKEEYGIAPRIEHY 377
DE FR M YGI P + +
Sbjct: 504 DGWCRLNRFDEALKVFRLMG-IYGIKPDVATF 534
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 140/336 (41%), Gaps = 23/336 (6%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
P+V +++T++ GY + M ++P+++ Y ++ + + + E E
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------------FA 213
S I+ G V +L+ + GD +A K F M R F
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 214 LNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
G EA LF EM G+EPD T L++ + G ++ RVH ++++AG N+
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 274 VVNALLDLYAKCGSIREAQQVFGEME----ERNVVSWTTLIVGLAVNGFGXXXXXXXXXX 329
L+D K G + A ++ EM + N+ ++ +++ GL +G
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 330 XXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGL 389
L +T+ ++ A G +D+ + + M + G+ P I + +++ G+
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGM 576
Query: 390 VKQAYEYIQNM---PVQPNAVIWRTLLGACTIHGHL 422
++ + + M + PNA + +L+ I +L
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 94/218 (43%), Gaps = 15/218 (6%)
Query: 101 HLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKS 160
H +F P+ T+ +I GY ++ K A + M + P+ TY L+ + K
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 161 LNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKV---------------F 205
++ L K G + +F NS+++ G+ E A K+ +
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 206 ESMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLK 265
++ D + +G ++A + +EM G++P T L++ G LE G ++ ++L
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Query: 266 AGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNV 303
G+ N N+L+ Y +++ A ++ +M R V
Sbjct: 590 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/229 (18%), Positives = 97/229 (42%), Gaps = 15/229 (6%)
Query: 92 SLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYP 151
L + H ++ + PN+FT+N+++ G +S + + A+ + + + DT TY
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 152 FLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKV------- 204
L+ A KS + + + + + G + + N L++ + G E K+
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590
Query: 205 --------FESMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELG 256
F S+ ++ + A ++++M + GV PDG T +L+ + ++
Sbjct: 591 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Query: 257 RRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVS 305
+ + G ++ + L+ + K EA++VF +M + +
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAA 699
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 91/216 (42%), Gaps = 10/216 (4%)
Query: 216 GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVV 275
GR EA L M G PD + ++++ G L+ ++ + + GL+ N ++
Sbjct: 260 GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 319
Query: 276 NALLDLYAKCGSIREAQQVFGEMEERNV----VSWTTLIVGLAVNGFGXXXXXXXXXXXX 331
+++ L + + EA++ F EM + + V +TTLI G G
Sbjct: 320 GSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS 379
Query: 332 QKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVK 391
+ + P +T+ ++ G + E F M + G+ P + +++ +AG +K
Sbjct: 380 RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHMK 438
Query: 392 QAYEYIQNMPVQ----PNAVIWRTLLGACTIHGHLS 423
A+ + N +Q PN V + TL+ G L
Sbjct: 439 DAFR-VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 140/336 (41%), Gaps = 23/336 (6%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
P+V +++T++ GY + M ++P+++ Y ++ + + + E E
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------------FA 213
S I+ G V +L+ + GD +A K F M R F
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 214 LNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
G EA LF EM G+EPD T L++ + G ++ RVH ++++AG N+
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 274 VVNALLDLYAKCGSIREAQQVFGEME----ERNVVSWTTLIVGLAVNGFGXXXXXXXXXX 329
L+D K G + A ++ EM + N+ ++ +++ GL +G
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 330 XXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGL 389
L +T+ ++ A G +D+ + + M + G+ P I + +++ G+
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGM 576
Query: 390 VKQAYEYIQNM---PVQPNAVIWRTLLGACTIHGHL 422
++ + + M + PNA + +L+ I +L
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 94/218 (43%), Gaps = 15/218 (6%)
Query: 101 HLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKS 160
H +F P+ T+ +I GY ++ K A + M + P+ TY L+ + K
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 161 LNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKV---------------F 205
++ L K G + +F NS+++ G+ E A K+ +
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 206 ESMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLK 265
++ D + +G ++A + +EM G++P T L++ G LE G ++ ++L
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Query: 266 AGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNV 303
G+ N N+L+ Y +++ A ++ +M R V
Sbjct: 590 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/229 (18%), Positives = 97/229 (42%), Gaps = 15/229 (6%)
Query: 92 SLSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYP 151
L + H ++ + PN+FT+N+++ G +S + + A+ + + + DT TY
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 152 FLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKV------- 204
L+ A KS + + + + + G + + N L++ + G E K+
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590
Query: 205 --------FESMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELG 256
F S+ ++ + A ++++M + GV PDG T +L+ + ++
Sbjct: 591 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Query: 257 RRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVS 305
+ + G ++ + L+ + K EA++VF +M + +
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAA 699
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 91/216 (42%), Gaps = 10/216 (4%)
Query: 216 GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVV 275
GR EA L M G PD + ++++ G L+ ++ + + GL+ N ++
Sbjct: 260 GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 319
Query: 276 NALLDLYAKCGSIREAQQVFGEMEERNV----VSWTTLIVGLAVNGFGXXXXXXXXXXXX 331
+++ L + + EA++ F EM + + V +TTLI G G
Sbjct: 320 GSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS 379
Query: 332 QKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVK 391
+ + P +T+ ++ G + E F M + G+ P + +++ +AG +K
Sbjct: 380 RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHMK 438
Query: 392 QAYEYIQNMPVQ----PNAVIWRTLLGACTIHGHLS 423
A+ + N +Q PN V + TL+ G L
Sbjct: 439 DAFR-VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 147/351 (41%), Gaps = 42/351 (11%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P+V T+ ++I ++ + A+ F QM + + P+ TY L+ S+ + E +
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------------FAL 214
NGF V N+L++ + G E A V E M ++ F
Sbjct: 403 LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 462
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
+ +EAL + REM G++PD T SL+ E + ++ +L+ GL +
Sbjct: 463 SYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFT 522
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXX 330
AL++ Y G + +A Q+ EM E+ +VV+++ LI GL
Sbjct: 523 YTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLF 582
Query: 331 XQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLV 390
++ P ++T+ ++ CS+ E + I+ + CM +++ A
Sbjct: 583 YEESVPSDVTYHTLIENCSNI--------------EFKSVVSLIKGF-CMKGMMTEA--- 624
Query: 391 KQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSG 441
Q +E + +P+ + + IHGH G+I +++ L E SG
Sbjct: 625 DQVFESMLGKNHKPDGTAYNIM-----IHGHCRAGDIRKAYTLYKEMVKSG 670
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 134/330 (40%), Gaps = 23/330 (6%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
PN+ ++N +I G K +M D TY L+K K N + +
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESA---------------HKVFESMTDRFAL 214
H+ +++G V SL+H G+ A + + ++ D F+
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
G NEA + REM+ NG P T +L++ G +E V + + GL ++
Sbjct: 393 KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVS 452
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEERNV----VSWTTLIVGLAVNGFGXXXXXXXXXXX 330
+ +L + + + EA +V EM E+ + +++++LI G
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 331 XQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLV 390
L P E T+ ++ A G L++ M E+ G+ P + Y +++ L++
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK-GVLPDVVTYSVLINGLNKQSRT 571
Query: 391 KQAYEYIQNMPVQ---PNAVIWRTLLGACT 417
++A + + + P+ V + TL+ C+
Sbjct: 572 REAKRLLLKLFYEESVPSDVTYHTLIENCS 601
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 144/353 (40%), Gaps = 29/353 (8%)
Query: 97 MSYAHLVFTMIR----NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPF 152
+S+A VF + +PNVFT+N +IRG+ + + AL + +M P+ TY
Sbjct: 186 ISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNT 245
Query: 153 LLKAVSKSLNVREG-EALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR 211
L+ K + +G + L S+ +K G E + N +++ G + V M R
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALK-GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR 304
Query: 212 ---------------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELG 256
+ G ++AL + EM +G+ P T SL+ + + G +
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRA 364
Query: 257 RRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVG 312
+ GL N L+D +++ G + EA +V EM + +VV++ LI G
Sbjct: 365 MEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424
Query: 313 LAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAP 372
V G + L+P +++ VL +DE R M E+ GI P
Sbjct: 425 HCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK-GIKP 483
Query: 373 RIEHYGCMVDLLSRAGLVKQA---YEYIQNMPVQPNAVIWRTLLGACTIHGHL 422
Y ++ K+A YE + + + P+ + L+ A + G L
Sbjct: 484 DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDL 536
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 99/235 (42%), Gaps = 30/235 (12%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
+P+V +++T++ G+ S D AL R+M ++PDT TY L++ + +E
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFAL----------NG-- 216
L+ ++ G F +L++ Y GD E A ++ M ++ L NG
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566
Query: 217 ---RPNEA----LTLFREMSA-----------NGVEPDGFTVVSLLSACAELGALELGRR 258
R EA L LF E S N + +VVSL+ G + +
Sbjct: 567 KQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQ 626
Query: 259 VHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGL 313
V +L + + N ++ + + G IR+A ++ EM + + T ++ L
Sbjct: 627 VFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIAL 681
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 75/186 (40%), Gaps = 5/186 (2%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P+ FT+ +I Y D + AL + +M V PD TY L+ ++K RE + L
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMS 229
+K +E V + + C + E K S+ F + G EA +F M
Sbjct: 578 ---LLKLFYEESVPSDVTYHTLIENCSNIE--FKSVVSLIKGFCMKGMMTEADQVFESML 632
Query: 230 ANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIR 289
+PDG ++ G + ++ ++K+G + V AL+ K G +
Sbjct: 633 GKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVN 692
Query: 290 EAQQVF 295
E V
Sbjct: 693 ELNSVI 698
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 135/309 (43%), Gaps = 26/309 (8%)
Query: 135 YRQMTMSCVEPD-THTYPFLLKAVSKSLNVREGEALHSVTIKNGFE-------------- 179
+ ++ +EP + F+L A+ V + H + ++ GF
Sbjct: 204 FDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS 263
Query: 180 -SLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMSANGVEPDGF 238
+ V + LL + CG + F ++ + F G + A LF+ M G+EPD
Sbjct: 264 VDQIEVASRLLSLVLDCGPAPNV-VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLI 322
Query: 239 TVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEM 298
+L+ + G L +G ++ L G++ ++ V ++ +D+Y K G + A V+ M
Sbjct: 323 AYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM 382
Query: 299 EER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGML 354
+ NVV++T LI GL +G + + P +T+ ++ CG L
Sbjct: 383 LCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 355 DEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNM---PVQPNAVIWRT 411
GF + M + G P + YG +VD LS+ GL+ A + M ++ N V++ +
Sbjct: 443 RSGFALYEDMI-KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNS 501
Query: 412 LL-GACTIH 419
L+ G C ++
Sbjct: 502 LIDGWCRLN 510
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 136/323 (42%), Gaps = 28/323 (8%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
PNV T+ T+I G+ + + A ++ M +EPD Y L+ K+ + G L
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMS 229
S + G + V V +S + +Y GD +A V ++ M
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVV--------------------YKRML 383
Query: 230 ANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIR 289
G+ P+ T L+ + G + ++ +LK G+ ++ ++L+D + KCG++R
Sbjct: 384 CQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 290 EAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVL 345
++ +M + +VV + L+ GL+ G Q + + F ++
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Query: 346 YACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQA---YEYIQNMPV 402
DE FR M YGI P + + ++ + G +++A + + M +
Sbjct: 504 DGWCRLNRFDEALKVFRLMG-IYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGL 562
Query: 403 QPNAVIWRTLLGACTIHGHLSLG 425
+P+A+ + TL+ A H ++G
Sbjct: 563 EPDALAYCTLIDAFCKHMKPTIG 585
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 163/425 (38%), Gaps = 65/425 (15%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
+PNV T+ +I+G + A Y Q+ +EP TY L+ K N+R G A
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447
Query: 169 LHSVTIKNGF--------------------------------ESL---VFVRNSLLHIYA 193
L+ IK G+ +S+ V V NSL+ +
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Query: 194 ACGDTESAHKVFESM--------TDRFA-------LNGRPNEALTLFREMSANGVEPDGF 238
+ A KVF M F + GR EAL LF M G+EPD
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDAL 567
Query: 239 TVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVF--- 295
+L+ A + +G ++ + + + ++ V N ++ L KC I +A + F
Sbjct: 568 AYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL 627
Query: 296 --GEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGM 353
G+ME ++V++ T+I G P +T +++
Sbjct: 628 IEGKMEP-DIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 686
Query: 354 LDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVK---QAYEYIQNMPVQPNAVIWR 410
+D F M E+ G P YGC++D S++ ++ + +E +Q + P+ V +
Sbjct: 687 MDGAIRMFSIMAEK-GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYS 745
Query: 411 TLLGACTIHGHLSLGEIARSHLLKLEPKHSGD---YVLLSNLYASERRWTDVQTIRKSML 467
++ G + E ++ K D Y +L Y R + + + ML
Sbjct: 746 IIIDGLCKRGRVD--EATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHML 803
Query: 468 QDGVK 472
++GVK
Sbjct: 804 RNGVK 808
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 109/246 (44%), Gaps = 11/246 (4%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P++FT+ MI Y +PK A + M V+PD TY LL + + RE EA
Sbjct: 633 PDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAF 692
Query: 170 HSVTIKNGFESLVFVR----NSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLF 225
V + +++ R N L +YA D + V + +T L +P L+
Sbjct: 693 -DVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLS-- 749
Query: 226 REMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKC 285
REM A V+PD F L+ ++G L +R+ ++++G+ + AL+ K
Sbjct: 750 REMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKM 809
Query: 286 GSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITF 341
G ++EA+ +F M E +VV +T LI G NGF + + P + +
Sbjct: 810 GYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASL 869
Query: 342 VGVLYA 347
V YA
Sbjct: 870 SAVHYA 875
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 138/351 (39%), Gaps = 38/351 (10%)
Query: 100 AHLVFTMIRNPNVFT--------WNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYP 151
A+ + +R+ N+ + ++RG + A M ++PD + Y
Sbjct: 271 AYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYS 330
Query: 152 FLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESM--- 208
+++ K++N+ + + + +K + +S+L Y G+ A+ +F+
Sbjct: 331 AIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRET 390
Query: 209 ---TDRFALN---------GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELG 256
DR N G+ EA+ LFREM+ G+ PD +L+ C G
Sbjct: 391 NISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDA 450
Query: 257 RRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNV----VSWTTLIVG 312
+ + + G ++ + N L A G +EA + ME R V V+ +I G
Sbjct: 451 FDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEG 510
Query: 313 LAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAP 372
L ++ K + + V A G LD F+ F R+ E+ + P
Sbjct: 511 L-IDAGELDKAEAFYESLEHKSRENDASMVKGFCA---AGCLDHAFERFIRL--EFPL-P 563
Query: 373 RIEHYGCMVDLLSRAGLVKQAYEYIQNM---PVQPNAVIWRTLLGA-CTIH 419
+ ++ L + + +A + + M V+P ++ L+GA C ++
Sbjct: 564 KSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVN 614
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 152/360 (42%), Gaps = 44/360 (12%)
Query: 104 FTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNV 163
+++ R P++ N +I S + F+ ++ ++ D HTY +++A+ ++ +
Sbjct: 174 YSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDK 233
Query: 164 REGEALHS-VTIKNGFESLVFVRNSLLHIYAACGD--TESAHKVFESMTD---------- 210
E E L S + I VF N I C + T+ A+ + + + D
Sbjct: 234 EELEKLLSRLLISETRNPCVFYLN---FIEGLCLNQMTDIAYFLLQPLRDANILVDKSDL 290
Query: 211 ----RFALNG-----RPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHV 261
R + G R +A ++ +M +G++PD + +++ + + + + V V
Sbjct: 291 GIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRK--NMNIPKAVDV 348
Query: 262 Y--LLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFG 319
+ +LK R N +V+++L Y + G+ EA +F E E N +S + +A + G
Sbjct: 349 FNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETN-ISLDRVCYNVAFDALG 407
Query: 320 XXXXXXXXXXXXQKL-----APGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRI 374
+++ AP I + ++ C G + FD M + G P I
Sbjct: 408 KLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEM-DGTGKTPDI 466
Query: 375 EHYGCMVDLLSRAGLVKQAYE---YIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSH 431
Y + L+ GL ++A+E ++N V+P V + I G + GE+ ++
Sbjct: 467 VIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMV-----IEGLIDAGELDKAE 521
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 160/398 (40%), Gaps = 47/398 (11%)
Query: 66 IHAFSIRHGVPLHNPDMGKHL-------IFTIVSL----------SAPMSYAHLVFTMIR 108
I+ F R +PL +GK + I T+ SL S ++ +F M
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
PN T+NT+I G A+ +M +PD TY ++ + K G+
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK-----RGDI 236
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREM 228
++++ E G E+ ++ ++ D N+AL LF EM
Sbjct: 237 DLALSLLKKMEK---------------GKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 281
Query: 229 SANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSI 288
G+ P+ T SL+ G R+ +++ + N+ +AL+D + K G +
Sbjct: 282 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 341
Query: 289 REAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGV 344
EA++++ EM +R ++ ++++LI G ++ + P +T+ +
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401
Query: 345 LYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNM---P 401
+ ++EG + FR M + G+ Y ++ L +AG A + + M
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQR-GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 402 VQPNAVIWRTLLGACTIHGHLSLGEIARSHLL--KLEP 437
V P+ + + LL +G L + +L K+EP
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 24/214 (11%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
+P++FT++++I G+ A H + M P+ TY L+K K+ V EG
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREM 228
L + G N+L+ GD + A K+ F++M
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI--------------------FKKM 456
Query: 229 SANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSI 288
++GV PD T LL + G LE V YL K+ + +++ N +++ K G +
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 516
Query: 289 REAQQVFGEMEER----NVVSWTTLIVGLAVNGF 318
+ +F + + NV+ +TT+I G G
Sbjct: 517 EDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGL 550
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 156/398 (39%), Gaps = 50/398 (12%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P++ +N ++ A+ + +M + D ++Y L+ + + A+
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPN---------- 219
+K G+E + +SLL+ Y A + + M F + +PN
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM---FVMEYQPNTVTFNTLIHG 194
Query: 220 --------EALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLREN 271
EA+ L M A G +PD FT ++++ + G ++L + + K + +
Sbjct: 195 LFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAD 254
Query: 272 LHVVNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXX 327
+ + ++D ++ +A +F EM+ + NVV++ +LI L G
Sbjct: 255 VVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 314
Query: 328 XXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYG------CMV 381
+K+ P +TF ++ A G L E + M + I P I Y CM
Sbjct: 315 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMH 373
Query: 382 DLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLL-GACTI----HGHLSLGEIARSHLLKLE 436
D L A K +E + + PN V + TL+ G C G E+++ L+
Sbjct: 374 DRLDEA---KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV--- 427
Query: 437 PKHSGDYVLLSNLYASERRWTD---VQTIRKSMLQDGV 471
G+ V + L + D Q I K M+ DGV
Sbjct: 428 ----GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 174/448 (38%), Gaps = 48/448 (10%)
Query: 43 PHVLTKCISLLQYCASSKHKLKQIHAFSIRHGVPLHNPDMGKHL---IFTIVSLSAPMSY 99
P V+T + YC+ K I + L++ GK + I+T +L + +
Sbjct: 470 PTVVTYTSLMGGYCSKGK----------INKALRLYHEMTGKGIAPSIYTFTTLLSGLFR 519
Query: 100 AHLVFTMIR----------NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHT 149
A L+ ++ PN T+N MI GY E D A F ++MT + PDT++
Sbjct: 520 AGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYS 579
Query: 150 YPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMT 209
Y L+ + + E + K E LLH + G E A V + M
Sbjct: 580 YRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMV 639
Query: 210 DR----------FALNGRPNEA-----LTLFREMSANGVEPDGFTVVSLLSACAELGALE 254
R ++G L +EM G++PD S++ A ++ G +
Sbjct: 640 QRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFK 699
Query: 255 LGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLI 310
+ ++ G N A+++ K G + EA+ + +M+ N V++ +
Sbjct: 700 EAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFL 759
Query: 311 VGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGI 370
L + L T+ ++ G ++E + RM + G+
Sbjct: 760 DILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGD-GV 818
Query: 371 APRIEHYGCMVDLLSRAGLVKQAYEYIQNMP---VQPNAVIWRTLLGACTIHGHLSLGEI 427
+P Y M++ L R VK+A E +M ++P+ V + TL+ C + G +
Sbjct: 819 SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATE 878
Query: 428 ARSHLLK--LEPKHSGDYVLLSNLYASE 453
R+ +L+ L P + SN +S+
Sbjct: 879 LRNEMLRQGLIPNNKTSRTTTSNDTSSK 906
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 150/376 (39%), Gaps = 41/376 (10%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P+V T+ T++ G + Q+ + L +M P L++ + K + E L
Sbjct: 295 PDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNL 354
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMS 229
+ G +FV N+L+ D + +EA LF M
Sbjct: 355 VKRVVDFGVSPNLFVYNALI--------------------DSLCKGRKFHEAELLFDRMG 394
Query: 230 ANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIR 289
G+ P+ T L+ G L+ ++ GL+ +++ N+L++ + K G I
Sbjct: 395 KIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDIS 454
Query: 290 EAQQVFGEM----EERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVL 345
A+ EM E VV++T+L+ G G + +AP TF +L
Sbjct: 455 AAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLL 514
Query: 346 YACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMP---V 402
G++ + F M E+ + P Y M++ G + +A+E+++ M +
Sbjct: 515 SGLFRAGLIRDAVKLFNEMA-EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573
Query: 403 QPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGD-------YVLLSNLYASERR 455
P+ +R L IHG G+ + + + ++ H G+ Y L + + E +
Sbjct: 574 VPDTYSYRPL-----IHGLCLTGQASEAKVF-VDGLHKGNCELNEICYTGLLHGFCREGK 627
Query: 456 WTDVQTIRKSMLQDGV 471
+ ++ + M+Q GV
Sbjct: 628 LEEALSVCQEMVQRGV 643
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/307 (19%), Positives = 110/307 (35%), Gaps = 82/307 (26%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
+PN+F +N +I + + A + +M + P+ TY L+ + + +
Sbjct: 364 SPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALS 423
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------------FA 213
+ G + V+ NSL++ + GD +A M ++ +
Sbjct: 424 FLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYC 483
Query: 214 LNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
G+ N+AL L+ EM+ G+ P +T +LLS L +AGL
Sbjct: 484 SKGKINKALRLYHEMTGKGIAPSIYTFTTLLSG----------------LFRAGL----- 522
Query: 274 VVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQK 333
IR+A ++F EM E NV
Sbjct: 523 --------------IRDAVKLFNEMAEWNV------------------------------ 538
Query: 334 LAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQA 393
P +T+ ++ G + + F++ + M E+ GI P Y ++ L G +A
Sbjct: 539 -KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK-GIVPDTYSYRPLIHGLCLTGQASEA 596
Query: 394 YEYIQNM 400
++ +
Sbjct: 597 KVFVDGL 603
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/328 (20%), Positives = 142/328 (43%), Gaps = 21/328 (6%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P++ T+ T++ G + D AL+ +M + ++ + + ++ ++ K +V L
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDL 280
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKV---------------FESMTDRFAL 214
+ G V NSL++ G A ++ F ++ D F
Sbjct: 281 FTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFK 340
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
G+ EA L EM ++PD T L++ L+ +++ +++ N+
Sbjct: 341 EGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQT 400
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXX 330
N L++ + KC + + ++F EM +R N V++TT+I G G
Sbjct: 401 YNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460
Query: 331 XQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLV 390
++ +T+ +L+ G LD F+ +++ + I Y M++ + +AG V
Sbjct: 461 SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKS-EMELNIFIYNTMIEGMCKAGKV 519
Query: 391 KQAYEYIQNMPVQPNAVIWRTLL-GACT 417
+A++ ++ ++P+ V + T++ G C+
Sbjct: 520 GEAWDLFCSLSIKPDVVTYNTMISGLCS 547
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 113/289 (39%), Gaps = 52/289 (17%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
NPNV T+N +I + + A + +M ++PDT TY L+ + E +
Sbjct: 325 NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQ 384
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------------FA 213
+ + + N+L++ + C E ++F M+ R F
Sbjct: 385 MFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFF 444
Query: 214 LNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
G + A +F++M +N V D T LL G L+ + YL K+ + N+
Sbjct: 445 QAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIF 504
Query: 274 VVNALLDLYAKCGSIREAQQVFGEMEER-NVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQ 332
+ N +++ K G + EA +F + + +VV++ T+I GL
Sbjct: 505 IYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGL------------------- 545
Query: 333 KLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMV 381
CS +L E D FR+MKE+ G P Y ++
Sbjct: 546 ---------------CSK-RLLQEADDLFRKMKED-GTLPNSGTYNTLI 577
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/349 (20%), Positives = 139/349 (39%), Gaps = 23/349 (6%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P++ T ++++ GY S+ A+ QM +PDT T+ L+ + E AL
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL 210
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHK---------------VFESMTDRFAL 214
++ G + + ++++ GD + A +F ++ D
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCK 270
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
A+ LF EM G+ P+ T SL++ G R+ +L+ + N+
Sbjct: 271 YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVT 330
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEERNV----VSWTTLIVGLAVNGFGXXXXXXXXXXX 330
NAL+D + K G + EA+++ EM +R++ +++ LI G ++
Sbjct: 331 FNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMV 390
Query: 331 XQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLV 390
+ P T+ ++ C +++G + FR M + G+ Y ++ +AG
Sbjct: 391 SKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQR-GLVGNTVTYTTIIQGFFQAGDC 449
Query: 391 KQAYEYIQNMP---VQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLE 436
A + M V + + + LL +G L + +L K E
Sbjct: 450 DSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE 498
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 136/330 (41%), Gaps = 24/330 (7%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P++ +N ++ A+ + + QM + D +TY + + + A+
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMT------DRFA---------L 214
+ +K G+E + +SLL+ Y A + + M D F L
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
+ + +EA+ L +M G +PD T ++++ + G ++L + + A ++ N+ +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXX 330
N ++D K + A +F EME + NVV++ +LI L G
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 331 XQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVD---LLSRA 387
+K+ P +TF ++ A G L E M + I P Y +++ + +R
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR-SIDPDTITYNLLINGFCMHNRL 379
Query: 388 GLVKQAYEYIQNMPVQPNAVIWRTLL-GAC 416
KQ ++++ + PN + TL+ G C
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFC 409
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 150/352 (42%), Gaps = 25/352 (7%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P++ T ++++ GY S+ A+ QM +PDT T+ L+ + E AL
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL 210
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHK---------------VFESMTDRFAL 214
++ G + + ++++ GD + A ++ ++ D
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK 270
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
++AL LF EM G+ PD FT SL+S G R+ +++ + N+
Sbjct: 271 YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT 330
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXX 330
+AL+D + K G + EA++++ EM +R ++ ++++LI G ++
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 331 XQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLV 390
+ P +T+ ++ ++EG + FR M + G+ Y ++ +A
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQR-GLVGNTVTYTTLIHGFFQARDC 449
Query: 391 KQA---YEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLK--LEP 437
A ++ + ++ V PN + + LL +G L+ + +L + +EP
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 111/269 (41%), Gaps = 20/269 (7%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
+P++FT++++I G+ A H + M P+ TY L+K K+ V EG
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMT---------------DRFA 213
L + G +L+H + D ++A VF+ M D
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 214 LNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
NG+ +A+ +F + + +EPD +T ++ + G +E G + L G+ N+
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVI 539
Query: 274 VVNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXX 329
N ++ + + GS EA + +M+E N ++ TLI +G
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Query: 330 XXQKLAPGEITFVGVLYACSHCGMLDEGF 358
A G+ + +G++ H G LD+ F
Sbjct: 600 RSCGFA-GDASTIGLVTNMLHDGRLDKSF 627
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/388 (20%), Positives = 155/388 (39%), Gaps = 30/388 (7%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P++ +N ++ A+ + + QM + D +TY + + + A+
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMT------DRFA---------L 214
+ +K G+E + +SLL+ Y A + + M D F L
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
+ + +EA+ L +M G +PD T ++++ + G ++L + + K + ++ +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXX 330
N ++D K + +A +F EM+ + +V ++++LI L G
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 331 XQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYG------CMVDLL 384
+K+ P +TF ++ A G L E + M + I P I Y CM D L
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRL 379
Query: 385 SRAGLVKQAYEYIQNMPVQPNAVIWRTLL-GACTIHGHLSLGEIARSHLLKLEPKHSGDY 443
A K +E + + PN V + TL+ G C E+ R + ++ Y
Sbjct: 380 DEA---KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 444 VLLSNLYASERRWTDVQTIRKSMLQDGV 471
L + + R + Q + K M+ GV
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 118/297 (39%), Gaps = 27/297 (9%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
NPNV T++ +I + + A Y +M ++PD TY L+ + E +
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 384
Query: 169 LHSVTI-KNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFRE 227
+ + I K+ F ++V + ++ F R E + LFRE
Sbjct: 385 MFELMISKDCFPNVV---------------------TYSTLIKGFCKAKRVEEGMELFRE 423
Query: 228 MSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGS 287
MS G+ + T +L+ + + + V ++ G+ N+ N LLD K G
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483
Query: 288 IREAQQVFGEME----ERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVG 343
+ +A VF ++ E ++ ++ +I G+ G + ++P I +
Sbjct: 484 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNT 543
Query: 344 VLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNM 400
++ G +E ++MKE+ G P Y ++ R G + + E I+ M
Sbjct: 544 MISGFCRKGSKEEADSLLKKMKED-GPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 125/306 (40%), Gaps = 21/306 (6%)
Query: 111 NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALH 170
+ T+NT+I G E A F +M + PDT +Y L+ K N +AL
Sbjct: 160 DTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKAL- 218
Query: 171 SVTIKNGFESLVFVRNSLLHIYAACGDTESAHK------------VFESMTDRFALNGRP 218
+ E + LL Y E A++ F S+ +R G+
Sbjct: 219 ---VDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKV 275
Query: 219 NEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNAL 278
E L REM V P+ T +L+ + + ++ ++ G+ +L V L
Sbjct: 276 LEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVL 335
Query: 279 LDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKL 334
+D K G +REA++ F + E NVV++T L+ GL G + +
Sbjct: 336 MDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSV 395
Query: 335 APGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAY 394
P +T+ ++ GML+E R+M E+ + P YG ++D L +AG + A
Sbjct: 396 IPNVVTYSSMINGYVKKGMLEEAVSLLRKM-EDQNVVPNGFTYGTVIDGLFKAGKEEMAI 454
Query: 395 EYIQNM 400
E + M
Sbjct: 455 ELSKEM 460
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/390 (19%), Positives = 171/390 (43%), Gaps = 33/390 (8%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
PN T+ T++ ++ + AL Y QM + + D Y L+ + K+ ++RE E
Sbjct: 292 PNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKT 351
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKV---------------FESMTDRFAL 214
+ +++ V +L+ GD SA + + SM + +
Sbjct: 352 FKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVK 411
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
G EA++L R+M V P+GFT +++ + G E+ + + G+ EN ++
Sbjct: 412 KGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYI 471
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEERNV----VSWTTLIVGLAVNGFGXXXXXXXXXXX 330
++AL++ + G I+E + + +M + V +++T+LI + G
Sbjct: 472 LDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLI-DVFFKGGDEEAALAWAEEM 530
Query: 331 XQKLAPGEITFVGVLYACSHCGML---DEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRA 387
++ P ++ VL + GML G D+ + E GI P I + M++ +
Sbjct: 531 QERGMPWDVVSYNVLIS----GMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQ 586
Query: 388 GL---VKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHL--SLGEIARSHLLKLEPKHSGD 442
G + + ++ +++ ++P+ + ++G +G + ++ + + L+++ P +
Sbjct: 587 GDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLT-T 645
Query: 443 YVLLSNLYASERRWTDVQTIRKSMLQDGVK 472
Y + + + +R + +++L G+K
Sbjct: 646 YRIFLDTSSKHKRADAIFKTHETLLSYGIK 675
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 90/216 (41%), Gaps = 23/216 (10%)
Query: 57 ASSKHK----LKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRN--- 109
SSKHK + + H + +G+ L + LI T+ L A ++ M
Sbjct: 652 TSSKHKRADAIFKTHETLLSYGIKLSR-QVYNTLIATLCKLGMTKKAAMVMGDMEARGFI 710
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P+ T+N+++ GY + AL Y M + + P+ TY +++ +S + ++E +
Sbjct: 711 PDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKW 770
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESM---------------TDRFAL 214
S G F N+L+ A G+ + + ++ M FA
Sbjct: 771 LSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFAN 830
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAEL 250
G+ +A L +EM GV P+ T +++S +L
Sbjct: 831 VGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKL 866
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 122/322 (37%), Gaps = 63/322 (19%)
Query: 175 KNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTD---------------RFALNGRPN 219
+ G E + N +++ GD+E K+++ M NG+
Sbjct: 566 EKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKME 625
Query: 220 EALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALL 279
EA+ + +M + P+ T L ++ + + H LL G++ + V N L+
Sbjct: 626 EAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLI 685
Query: 280 DLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEI 339
K G ++A V G+ME R + P +
Sbjct: 686 ATLCKLGMTKKAAMVMGDMEARGFI-------------------------------PDTV 714
Query: 340 TFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQN 399
TF +++ + + + M E GI+P + Y ++ LS AGL+K+ +++
Sbjct: 715 TFNSLMHGYFVGSHVRKALSTYSVMMEA-GISPNVATYNTIIRGLSDAGLIKEVDKWLSE 773
Query: 400 MP---VQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLE-------PKHSGDYVLLSNL 449
M ++P+ + L I G +G + S + E PK S VL+S
Sbjct: 774 MKSRGMRPDDFTYNAL-----ISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISE- 827
Query: 450 YASERRWTDVQTIRKSMLQDGV 471
+A+ + + + K M + GV
Sbjct: 828 FANVGKMLQARELLKEMGKRGV 849
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 141/341 (41%), Gaps = 29/341 (8%)
Query: 93 LSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPF 152
+S ++ + M P+ T+ T++ G + A+ +M + +PD TY
Sbjct: 161 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 220
Query: 153 LLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRF 212
++ + K GE ++ + N E G E+ ++ ++ D
Sbjct: 221 VINGLCK-----RGEPDLALNLLNKMEK---------------GKIEADVVIYNTIIDGL 260
Query: 213 ALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENL 272
++A LF +M G++PD FT L+S G R+ +L+ + +L
Sbjct: 261 CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDL 320
Query: 273 HVVNALLDLYAKCGSIREAQQVFGEMEER-----NVVSWTTLIVGLAVNGFGXXXXXXXX 327
NAL+D + K G + EA++++ EM + +VV++ TLI G
Sbjct: 321 VFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFR 380
Query: 328 XXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRA 387
+ L +T+ +++ D F++M + G+ P I Y ++D L
Sbjct: 381 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD-GVHPDIMTYNILLDGLCNN 439
Query: 388 GLVKQA---YEYIQNMPVQPNAVIWRTLLGACTIHGHLSLG 425
G V+ A +EY+Q ++ + V + T++ A G + G
Sbjct: 440 GNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 92/230 (40%), Gaps = 22/230 (9%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P+VFT+N +I A M + PD + L+ A K + E E L
Sbjct: 283 PDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKL 342
Query: 170 HSVTIKNG--FESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------------F 212
+ +K+ F +V N+L+ + E +VF M+ R F
Sbjct: 343 YDEMVKSKHCFPDVV-AYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGF 401
Query: 213 ALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENL 272
+ A +F++M ++GV PD T LL G +E V Y+ K ++ ++
Sbjct: 402 FQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDI 461
Query: 273 HVVNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGF 318
+++ K G + + +F + + NVV++TT++ G G
Sbjct: 462 VTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 511
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 163/370 (44%), Gaps = 25/370 (6%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
+PNV T+ +I GY ++ D + A+ Y++M + + TY L+ K ++ E
Sbjct: 195 SPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEE 254
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------------FA 213
++S +++ E V +++ + GD+++A K M ++
Sbjct: 255 MYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLC 314
Query: 214 LNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
NG+ EA + +M + + PD ++++A + G ++ ++ L++ G ++
Sbjct: 315 GNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVV 374
Query: 274 VVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQK 333
++ ++D AK G + EA F +E+ N V +T LI L G
Sbjct: 375 ALSTMIDGIAKNGQLHEAIVYFC-IEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAG 433
Query: 334 LAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLV--- 390
L P + + + G L + F RM +E G+ + Y ++ L+ GL+
Sbjct: 434 LVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQE-GLLLDLLAYTTLIYGLASKGLMVEA 492
Query: 391 KQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLY 450
+Q ++ + N + P++ ++ L+ A G+++ A S LL L+ + G +S+
Sbjct: 493 RQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMA----AASDLL-LDMQRRGLVTAVSDAD 547
Query: 451 ASERRWTDVQ 460
S++ +V
Sbjct: 548 CSKQCGNEVN 557
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 126/330 (38%), Gaps = 25/330 (7%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P+ FT N I S +L F + P ++ ++ V K V+ E +
Sbjct: 19 PDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDI 78
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRP-----NEALTL 224
+ G E V NSL+ + GD SA V ES+ +P N
Sbjct: 79 VHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNG 138
Query: 225 FREMSA-------NGV-----EPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENL 272
F +M GV P+ T + + + G L+L + + + L N+
Sbjct: 139 FSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNV 198
Query: 273 HVVNALLDLYAKCGSIREAQQVFGEME----ERNVVSWTTLIVGLAVNGFGXXXXXXXXX 328
L+D Y K G + A ++ EM NVV++T LI G G
Sbjct: 199 VTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSR 258
Query: 329 XXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAG 388
++ P + + ++ G D + +M + G+ I YG ++ L G
Sbjct: 259 MVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQ-GMRLDITAYGVIISGLCGNG 317
Query: 389 LVKQAYEYIQNM---PVQPNAVIWRTLLGA 415
+K+A E +++M + P+ VI+ T++ A
Sbjct: 318 KLKEATEIVEDMEKSDLVPDMVIFTTMMNA 347
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 134/328 (40%), Gaps = 32/328 (9%)
Query: 97 MSYAHLVFTMIR----NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPF 152
+S A VF I P V ++NT+I GY + + QM S PD TY
Sbjct: 256 ISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSA 315
Query: 153 LLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRF 212
L+ A+ K + L K G + +L+H ++ G+ + + ++ M +
Sbjct: 316 LINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSK- 374
Query: 213 ALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENL 272
G++PD +L++ + G L R + +++ GLR +
Sbjct: 375 -------------------GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDK 415
Query: 273 HVVNALLDLYAKCGSIREAQQVFGEMEERNV----VSWTTLIVGLAVNGFGXXXXXXXXX 328
L+D + + G + A ++ EM++ + V ++ L+ G+ G
Sbjct: 416 ITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALRE 475
Query: 329 XXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAG 388
+ P ++T+ ++ A G GF + M+ + G P + Y +++ L + G
Sbjct: 476 MLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSD-GHVPSVVTYNVLLNGLCKLG 534
Query: 389 LVKQA---YEYIQNMPVQPNAVIWRTLL 413
+K A + + N+ V P+ + + TLL
Sbjct: 535 QMKNADMLLDAMLNIGVVPDDITYNTLL 562
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 105/225 (46%), Gaps = 17/225 (7%)
Query: 260 HVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERN----VVSWTTLIVGLAV 315
++ +L AG N++V N L++ + K G+I +AQ+VF E+ +R+ VVS+ TLI G
Sbjct: 228 YMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCK 287
Query: 316 NGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIE 375
G + P T+ ++ A +D F M + G+ P
Sbjct: 288 VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKR-GLIPNDV 346
Query: 376 HYGCMVDLLSRAG---LVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHL 432
+ ++ SR G L+K++Y+ + + +QP+ V++ TL+ +G L +
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406
Query: 433 LK--LEPKHSGDYVLLSNLYASERRWTDVQT---IRKSMLQDGVK 472
++ L P D + + L R DV+T IRK M Q+G++
Sbjct: 407 IRRGLRP----DKITYTTLIDGFCRGGDVETALEIRKEMDQNGIE 447
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 124/318 (38%), Gaps = 71/318 (22%)
Query: 177 GFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------------FALNGRPNEA 221
GF V+V N L++ + G+ A KVF+ +T R + G +E
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 222 LTLFREMSANGVEPDGFTVVSLLSA-CAE------------------------------- 249
L +M + PD FT +L++A C E
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 250 ---LGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNV--- 303
G ++L + + +L GL+ ++ + N L++ + K G + A+ + M R +
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 304 -VSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEG--FDY 360
+++TTLI +GF +++ I V ++ CGM EG D
Sbjct: 415 KITYTTLI-----DGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469
Query: 361 FRRMKE--EYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQ---PNAVIWRTLLGA 415
R ++E GI P Y M+D + G + ++ ++ M P+ V + LL
Sbjct: 470 ERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLL-- 527
Query: 416 CTIHGHLSLGEIARSHLL 433
+G LG++ + +L
Sbjct: 528 ---NGLCKLGQMKNADML 542
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 116/269 (43%), Gaps = 20/269 (7%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQM-TMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
P++ T+NT+I+G+ +S + A ++ + + S PD TY ++ K+ +RE +
Sbjct: 239 PDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASS 298
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKV---------------FESMTDRFA 213
L ++ G N L+ YA G+ +A ++ F S+ D +
Sbjct: 299 LLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYC 358
Query: 214 LNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
G+ ++ L+ EM+A G+ P+ FT L++A L R + L +
Sbjct: 359 RVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPF 418
Query: 274 VVNALLDLYAKCGSIREAQQVFGEMEERNV----VSWTTLIVGLAVNGFGXXXXXXXXXX 329
+ N ++D + K G + EA + EME++ +++T LI+G + G
Sbjct: 419 MYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKM 478
Query: 330 XXQKLAPGEITFVGVLYACSHCGMLDEGF 358
+P +IT +L GM E +
Sbjct: 479 VAIGCSPDKITVSSLLSCLLKAGMAKEAY 507
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 116/269 (43%), Gaps = 20/269 (7%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQM-TMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
P++ T+NT+I+G+ +S + A ++ + + S PD TY ++ K+ +RE +
Sbjct: 239 PDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASS 298
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKV---------------FESMTDRFA 213
L ++ G N L+ YA G+ +A ++ F S+ D +
Sbjct: 299 LLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYC 358
Query: 214 LNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
G+ ++ L+ EM+A G+ P+ FT L++A L R + L +
Sbjct: 359 RVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPF 418
Query: 274 VVNALLDLYAKCGSIREAQQVFGEMEERNV----VSWTTLIVGLAVNGFGXXXXXXXXXX 329
+ N ++D + K G + EA + EME++ +++T LI+G + G
Sbjct: 419 MYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKM 478
Query: 330 XXQKLAPGEITFVGVLYACSHCGMLDEGF 358
+P +IT +L GM E +
Sbjct: 479 VAIGCSPDKITVSSLLSCLLKAGMAKEAY 507
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 158/367 (43%), Gaps = 34/367 (9%)
Query: 100 AHLVFTMIRN-----PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLL 154
A VF RN +V +N MI+ Y +++ + AL ++ M PD TY L
Sbjct: 498 AETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLF 557
Query: 155 KAVSKSLNVREGEALHSVTIKNG-------FESLV--FVRNSLL----HIYAACGDT--E 199
+ ++ V E + + + + +G + +++ +VR LL +Y A T +
Sbjct: 558 QMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVK 617
Query: 200 SAHKVFESMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRV 259
V+ S+ + FA +G EA+ FR M +GV+ + + SL+ A +++G LE RRV
Sbjct: 618 PNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRV 677
Query: 260 HVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEER---NVVSWTTLIVGLAVN 316
+ + + ++ N++L L A G + EA+ +F + E+ +V+S+ T++
Sbjct: 678 YDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGM 737
Query: 317 GFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEH 376
G L +F V+ + G L E + F M E +
Sbjct: 738 GMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGT 797
Query: 377 YGCMVDLLSRAGLVKQAYEYIQNM--PVQPNAV--IWRTLLGACTIHGH-------LSLG 425
+ + LL + G+ +A +Q +P A I TL A ++ + L+ G
Sbjct: 798 FKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSG 857
Query: 426 EIARSHL 432
EI R H
Sbjct: 858 EIPREHF 864
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 135/342 (39%), Gaps = 61/342 (17%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
+P+ T+N ++ +A++ D + AL +YR++ + PDT T+ +L + + V E EA
Sbjct: 372 SPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEA 431
Query: 169 LHSVTIKNGF----------------ESLVFVRNSL------------------LHIYAA 194
+ + +N E LV +L + +YA
Sbjct: 432 VIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAE 491
Query: 195 CGDTESAHKVFESMTDRFALNGRPNE-------------------ALTLFREMSANGVEP 235
G A VF + ++G+ N+ AL+LF+ M G P
Sbjct: 492 KGLWVEAETVFYGKRN---MSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWP 548
Query: 236 DGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVF 295
D T SL A + ++ +R+ +L +G + A++ Y + G + +A ++
Sbjct: 549 DECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLY 608
Query: 296 GEMEERNV----VSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHC 351
ME+ V V + +LI G A +G + I ++ A S
Sbjct: 609 EAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKV 668
Query: 352 GMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQA 393
G L+E + +MK+ G P + M+ L + G+V +A
Sbjct: 669 GCLEEARRVYDKMKDSEG-GPDVAASNSMLSLCADLGIVSEA 709
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/361 (19%), Positives = 131/361 (36%), Gaps = 28/361 (7%)
Query: 111 NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALH 170
+ T+NTMI A ++M + PDT TY LL + + ++ +
Sbjct: 339 DTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYY 398
Query: 171 SVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMSA 230
K G ++LHI V M DR ++ + + +
Sbjct: 399 RKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEM-DRNSIRIDEHSVPVIMQMYVN 457
Query: 231 NGVEPDGFTVVSLLSACAELGALELGRRVHVYLLK----------------AGLRENLHV 274
G+ + L + L + VY K +G R ++
Sbjct: 458 EGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLE 517
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEERNV----VSWTTLIVGLAVNGFGXXXXXXXXXXX 330
N ++ Y K +A +F M+ + ++ +L LA
Sbjct: 518 YNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEML 577
Query: 331 XQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLV 390
PG T+ ++ + G+L + D + M E+ G+ P YG +++ + +G+V
Sbjct: 578 DSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAM-EKTGVKPNEVVYGSLINGFAESGMV 636
Query: 391 KQAYEYIQNMP---VQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLS 447
++A +Y + M VQ N ++ +L+ A + G L E AR K++ G V S
Sbjct: 637 EEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCL---EEARRVYDKMKDSEGGPDVAAS 693
Query: 448 N 448
N
Sbjct: 694 N 694
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 134/330 (40%), Gaps = 27/330 (8%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLN-VREGEA 168
PN+ T+NT+I G AL + M V+P +TY + KS + V E
Sbjct: 396 PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 455
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------------FA 213
+ K G + N+ L+ A G A ++F + D ++
Sbjct: 456 FEKMKTK-GIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 514
Query: 214 LNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
G +EA+ L EM NG EPD V SL++ + ++ ++ + + + L+ +
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 574
Query: 274 VVNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXX 329
N LL K G I+EA ++F M ++ N +++ TL L N
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Query: 330 XXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGL 389
P T+ +++ G + E +F +MK+ + P ++ + +A L
Sbjct: 635 MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL--VYPDFVTLCTLLPGVVKASL 692
Query: 390 VKQAYEYIQNM----PVQPNAVIWRTLLGA 415
++ AY+ I N QP + W L+G+
Sbjct: 693 IEDAYKIITNFLYNCADQPANLFWEDLIGS 722
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 130/331 (39%), Gaps = 50/331 (15%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P + T+N +I G E+ + A + Q+ + PD TY FLL A KS + E L
Sbjct: 783 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVF-ESMTDR---------------FA 213
+ + E+ N ++ G+ + A ++ + M+DR +
Sbjct: 843 YKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902
Query: 214 LNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
+GR EA LF M G P+ L++ + G + + ++K G+R +L
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962
Query: 274 VVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQK 333
+ L+D G + E F E++E + + + L +NG G
Sbjct: 963 TYSVLVDCLCMVGRVDEGLHYFKELKESGL-NPDVVCYNLIINGLGK------------- 1008
Query: 334 LAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQA 393
SH L+E F MK GI P + Y ++ L AG+V++A
Sbjct: 1009 ---------------SH--RLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEA 1051
Query: 394 ---YEYIQNMPVQPNAVIWRTLLGACTIHGH 421
Y IQ ++PN + L+ ++ G
Sbjct: 1052 GKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1082
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 135/336 (40%), Gaps = 71/336 (21%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P+VFT+NT+I G ++ K A+ F+ QM V PD T LL V K+ + + +
Sbjct: 641 PDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKI 699
Query: 170 HSVTIKNGFE--SLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNG--RPNEAL--- 222
+ + N + + +F + + I A G + S ++R NG R +++
Sbjct: 700 ITNFLYNCADQPANLFWEDLIGSILAEAGIDNAV-----SFSERLVANGICRDGDSILVP 754
Query: 223 ---------------TLFREMSAN-GVEPDGFTVVSLLSACAELGALELGRRVHVYLLKA 266
TLF + + + GV+P T L+ E +E+ + V + +
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814
Query: 267 GLRENLHVVNALLDLYAKCGSIREAQQVFGEME----ERNVVSWTTLIVGLAVNGFGXXX 322
G ++ N LLD Y K G I E +++ EM E N ++ +I GL
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLV-------- 866
Query: 323 XXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVD 382
G +D+ D + + + +P YG ++D
Sbjct: 867 ---------------------------KAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 899
Query: 383 LLSRAGLV---KQAYEYIQNMPVQPNAVIWRTLLGA 415
LS++G + KQ +E + + +PN I+ L+
Sbjct: 900 GLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 935
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 118/303 (38%), Gaps = 26/303 (8%)
Query: 100 AHLVFTMIRN----PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLK 155
A VF +++ P+V T+N ++ Y +S Y++M+ E +T T+ ++
Sbjct: 804 AQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVIS 863
Query: 156 AVSKSLNVREGEALH-SVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR--- 211
+ K+ NV + L+ + F L+ + G A ++FE M D
Sbjct: 864 GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCR 923
Query: 212 ------------FALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRV 259
F G + A LF+ M GV PD T L+ +G ++ G
Sbjct: 924 PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 983
Query: 260 HVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEER-----NVVSWTTLIVGLA 314
L ++GL ++ N +++ K + EA +F EM+ ++ ++ +LI+ L
Sbjct: 984 FKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLG 1043
Query: 315 VNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRI 374
+ G L P TF ++ S G + + ++ M G +P
Sbjct: 1044 IAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTG-GFSPNT 1102
Query: 375 EHY 377
Y
Sbjct: 1103 GTY 1105
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 120/321 (37%), Gaps = 38/321 (11%)
Query: 105 TMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVR 164
T+ PNV+T+ IR + A ++M PD TY L+ A+ + R
Sbjct: 251 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTA---R 307
Query: 165 EGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTL 224
+ + V FE + G + + ++ DRF+ N +
Sbjct: 308 KLDCAKEV-----FEKM------------KTGRHKPDRVTYITLLDRFSDNRDLDSVKQF 350
Query: 225 FREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAK 284
+ EM +G PD T L+ A + G + G+ NLH N L+
Sbjct: 351 WSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLI----- 405
Query: 285 CGSIR-----EAQQVFGEMEERNV----VSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLA 335
CG +R +A ++FG ME V ++ I +G + +A
Sbjct: 406 CGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIA 465
Query: 336 PGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYE 395
P + LY+ + G E F +K + G+ P Y M+ S+ G + +A +
Sbjct: 466 PNIVACNASLYSLAKAGRDREAKQIFYGLK-DIGLVPDSVTYNMMMKCYSKVGEIDEAIK 524
Query: 396 YIQNM---PVQPNAVIWRTLL 413
+ M +P+ ++ +L+
Sbjct: 525 LLSEMMENGCEPDVIVVNSLI 545
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 109/304 (35%), Gaps = 28/304 (9%)
Query: 111 NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALH 170
N +++N +I +S+ A+ YR+M + P TY L+ + K ++ L
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLL 246
Query: 171 SVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMSA 230
G + V+ + + G+ NEA + + M
Sbjct: 247 KEMETLGLKPNVYTFTICIRVLGRA--------------------GKINEAYEILKRMDD 286
Query: 231 NGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIRE 290
G PD T L+ A L+ + V + + + LLD ++ +
Sbjct: 287 EGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDS 346
Query: 291 AQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLY 346
+Q + EME+ +VV++T L+ L G Q + P T+ ++
Sbjct: 347 VKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLIC 406
Query: 347 ACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMP---VQ 403
LD+ + F M E G+ P Y +D ++G A E + M +
Sbjct: 407 GLLRVHRLDDALELFGNM-ESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIA 465
Query: 404 PNAV 407
PN V
Sbjct: 466 PNIV 469
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/374 (19%), Positives = 146/374 (39%), Gaps = 56/374 (14%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P++ T N+++ G+ A+ QM +PDT T+ L+ + E AL
Sbjct: 146 PDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVAL 205
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHK---------------VFESMTDRFAL 214
++ G + + ++++ GDT+ A ++ ++ D
Sbjct: 206 IDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCK 265
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
++AL LF EM GV P+ T SL+S G R+ +++ + NL
Sbjct: 266 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVT 325
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXX 330
+AL+D + K G + +A++++ EM +R N+ ++++LI G +
Sbjct: 326 FSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMI 385
Query: 331 XQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKE------------------------ 366
+ P +T+ ++ +D+G + FR M +
Sbjct: 386 RKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 445
Query: 367 ----------EYGIAPRIEHYGCMVDLLSRAGLVKQA---YEYIQNMPVQPNAVIWRTLL 413
G+ P I Y ++D L + G + +A +EY+Q ++P+ + ++
Sbjct: 446 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 505
Query: 414 GACTIHGHLSLGEI 427
G +G I
Sbjct: 506 EGMCKAGKWKMGGI 519
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 154/385 (40%), Gaps = 24/385 (6%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P++ ++ ++ A+ + F +M + + + +TY L+ + + AL
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------------FAL 214
+K G+E + NSLL+ + A + + M + L
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
+ + +EA+ L M G +PD T ++++ + G +L + + A + N+ +
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXX 330
+ ++D K +A +F EME + NV+++++LI L G
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 331 XQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVD---LLSRA 387
+K+ P +TF ++ A G L + + M + I P I Y +++ +L R
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR-SIDPNIFTYSSLINGFCMLDRL 374
Query: 388 GLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLG-EIARSHLLKLEPKHSGDYVLL 446
G KQ E + PN V + TL+ + G E+ R + ++ Y L
Sbjct: 375 GEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434
Query: 447 SNLYASERRWTDVQTIRKSMLQDGV 471
+ + R + Q + K M+ GV
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGV 459
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 73/177 (41%), Gaps = 18/177 (10%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
+PN+FT++++I G+ A M P+ TY L+ K+ V +G
Sbjct: 355 DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGME 414
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMT---------------DRFA 213
L + G +L+H + D ++A VF+ M D
Sbjct: 415 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 474
Query: 214 LNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRE 270
NG+ +A+ +F + + +EPD +T ++ + G ++G +Y + + L+E
Sbjct: 475 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG---GIYFVASALKE 528
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 142/330 (43%), Gaps = 27/330 (8%)
Query: 97 MSYAHLVFTMIRN----PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPF 152
++YA +F + N P+V + +++ G S + A R MT ++PD T+
Sbjct: 193 VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNA 252
Query: 153 LLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVF------- 205
L+ A K + E L++ I+ +F SL++ + G + A ++F
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG 312
Query: 206 --------ESMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGR 257
S+ + F + ++A+ +F EMS G+ + T +L+ ++G + +
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQ 372
Query: 258 RVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEER-------NVVSWTTLI 310
V +++ G+ N+ N LL G +++A +F +M++R N+ ++ L+
Sbjct: 373 EVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLL 432
Query: 311 VGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGI 370
GL NG +++ G IT+ ++ G + + F + + G+
Sbjct: 433 HGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK-GV 491
Query: 371 APRIEHYGCMVDLLSRAGLVKQAYEYIQNM 400
P + Y M+ L R GL +A+ + M
Sbjct: 492 KPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 131/312 (41%), Gaps = 21/312 (6%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P++ T+ ++I G+ + A+ QM ++PD Y ++ ++ K+ +V +L
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSL 199
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMT---------------DRFAL 214
G V + SL++ G A + MT D F
Sbjct: 200 FDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK 259
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
G+ +A L+ EM + P+ FT SL++ G ++ R++ + G ++
Sbjct: 260 EGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVA 319
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXX 330
+L++ + KC + +A ++F EM ++ N +++TTLI G G
Sbjct: 320 YTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMV 379
Query: 331 XQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRM--KEEYGIAPRIEHYGCMVDLLSRAG 388
+ + P T+ +L+ + G + + F M +E G+AP I Y ++ L G
Sbjct: 380 SRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNG 439
Query: 389 LVKQAYEYIQNM 400
+++A ++M
Sbjct: 440 KLEKALMVFEDM 451
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 136/337 (40%), Gaps = 26/337 (7%)
Query: 111 NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALH 170
+++T N ++ + +S P A F +M EPD T+ L+ + E ++
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 171 SVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE---------------SMTDRFALN 215
+ ++ G + V + +++ G A +F+ S+ + +
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 216 GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVV 275
GR +A +L R M+ ++PD T +L+ A + G ++ +++ + N+
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 276 NALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXXX 331
+L++ + G + EA+Q+F ME + +VV++T+LI G
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ 345
Query: 332 QKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVK 391
+ L IT+ ++ G + + F M G+ P I Y ++ L G VK
Sbjct: 346 KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR-GVPPNIRTYNVLLHCLCYNGKVK 404
Query: 392 QAYEYIQNMP------VQPNAVIWRTLLGACTIHGHL 422
+A ++M V PN + LL +G L
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKL 441
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/420 (20%), Positives = 166/420 (39%), Gaps = 61/420 (14%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P++ T ++++ GY + A+ QM PDT T+ L+ + E AL
Sbjct: 153 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL 212
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHK---------------VFESMTDRFAL 214
++ G + + +++ GDT+ A +F ++ D
Sbjct: 213 VDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK 272
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
++AL LF+EM G+ P+ T SL+S G ++ +++ + NL
Sbjct: 273 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 332
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEER--------------------------------- 301
NAL+D + K G EA++++ +M +R
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 302 ------NVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLD 355
+VV++ TLI G + + L +T+ ++ H G D
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 452
Query: 356 EGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQA---YEYIQNMPVQPNAVIWRTL 412
F++M + G+ P I Y ++D L G +++A ++Y+Q ++ + I+ T+
Sbjct: 453 NAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 413 LGACTIHGHLSLG-EIARSHLLK-LEPKHSGDYVLLSNLYASERRWTDVQTIRKSMLQDG 470
+ G + G ++ S LK ++P ++S L S+R + + K M +DG
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL-CSKRLLQEAYALLKKMKEDG 570
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 24/209 (11%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
+P++FT+N+++ G+ A + M PD TY L+K KS V +G
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREM 228
L G +L+ GD ++A KVF ++M
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF--------------------KQM 461
Query: 229 SANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSI 288
++GV PD T LL G LE V Y+ K+ ++ ++++ +++ K G +
Sbjct: 462 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 521
Query: 289 REAQQVFGEMEER----NVVSWTTLIVGL 313
+ +F + + NVV++ T+I GL
Sbjct: 522 DDGWDLFCSLSLKGVKPNVVTYNTMISGL 550
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 83/393 (21%), Positives = 152/393 (38%), Gaps = 40/393 (10%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P++ +N ++ A+ + + +M + +TY L+ + + AL
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------------FAL 214
+K G+E + +SLL+ Y A + + M + L
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
+ + +EA+ L M G +P+ T +++ + G +L + + A + ++ +
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXX 330
N ++D K + +A +F EME + NVV++++LI L G
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 331 XQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYG------CMVDLL 384
+K+ P +TF ++ A G E + M + I P I Y CM D L
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR-SIDPDIFTYNSLVNGFCMHDRL 381
Query: 385 SRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHS---G 441
+A KQ +E++ + P+ V + TL I G + L E H G
Sbjct: 382 DKA---KQMFEFMVSKDCFPDVVTYNTL-----IKGFCKSKRVEDGTELFREMSHRGLVG 433
Query: 442 DYVLLSNLYAS---ERRWTDVQTIRKSMLQDGV 471
D V + L + + Q + K M+ DGV
Sbjct: 434 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 124/302 (41%), Gaps = 28/302 (9%)
Query: 102 LVFTMIRN---PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVS 158
L+ M RN P+VF++NT+IRG+ E ++ + AL +M S T+ L+ A
Sbjct: 164 LLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFC 223
Query: 159 KSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRP 218
K+ + E G E+ + V SL+ + CG+ + +F+ + +R
Sbjct: 224 KAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER------- 276
Query: 219 NEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNAL 278
G P T +L+ +LG L+ + ++++ G+R N++ L
Sbjct: 277 -------------GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGL 323
Query: 279 LDLYAKCGSIREAQQVFGEM----EERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKL 334
+D G +EA Q+ M EE N V++ +I L +G ++
Sbjct: 324 IDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRT 383
Query: 335 APGEITFVGVLYACSHCGMLDEGFDYFRRM-KEEYGIAPRIEHYGCMVDLLSRAGLVKQA 393
P IT+ +L G LDE M K+ P + Y ++ L + + QA
Sbjct: 384 RPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQA 443
Query: 394 YE 395
+
Sbjct: 444 LD 445
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 124/334 (37%), Gaps = 61/334 (18%)
Query: 111 NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALH 170
NV+ N +++G + + A+ R+M + + PD +Y +++ + + + L
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 171 SVTIKNGFE-SLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMS 229
+ +G SLV + + D F G+ +EA+ +EM
Sbjct: 201 NEMKGSGCSWSLV---------------------TWGILIDAFCKAGKMDEAMGFLKEMK 239
Query: 230 ANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIR 289
G+E D SL+ + G L+ G+ + +L+ G N L+ + K G ++
Sbjct: 240 FMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLK 299
Query: 290 EAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACS 349
EA ++F M ER V P T+ G++
Sbjct: 300 EASEIFEFMIERGV-------------------------------RPNVYTYTGLIDGLC 328
Query: 350 HCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMP---VQPNA 406
G E M E+ P Y +++ L + GLV A E ++ M +P+
Sbjct: 329 GVGKTKEALQLLNLMIEK-DEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387
Query: 407 VIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHS 440
+ + LLG G L S LL L K S
Sbjct: 388 ITYNILLGGLCAKGDLD----EASKLLYLMLKDS 417
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/339 (19%), Positives = 130/339 (38%), Gaps = 25/339 (7%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
+P T+NT+IRG+ + K A + M V P+ +TY L+ + +E
Sbjct: 279 SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQ 338
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------------FA 213
L ++ I+ E N +++ G A ++ E M R
Sbjct: 339 LLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398
Query: 214 LNGRPNEALTLFREM--SANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLREN 271
G +EA L M ++ +PD + +L+ + L ++ L++ +
Sbjct: 399 AKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGD 458
Query: 272 LHVVNALLDLYAKCGSIREAQQVFGEMEE----RNVVSWTTLIVGLAVNGFGXXXXXXXX 327
N LL+ K G + +A +++ ++ + RN ++T +I G G
Sbjct: 459 RVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLC 518
Query: 328 XXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRA 387
+L P + +L + G LD+ + F M+ + P + + M+D +A
Sbjct: 519 KMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNF-PDVVSFNIMIDGSLKA 577
Query: 388 GLVKQAYEYIQNMP---VQPNAVIWRTLLGACTIHGHLS 423
G +K A + M + P+ + L+ G+L
Sbjct: 578 GDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLD 616
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/384 (20%), Positives = 150/384 (39%), Gaps = 33/384 (8%)
Query: 65 QIHAFSIRHGVPLHNPDMGKH--LIFTIVSLSAPMSYAHLVFTMIRN---PNVFTWNTMI 119
+I F I GV P++ + LI + + L+ MI PN T+N +I
Sbjct: 303 EIFEFMIERGV---RPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIII 359
Query: 120 RGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNG-- 177
+ A+ M PD TY LL + ++ E L + +K+
Sbjct: 360 NKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSY 419
Query: 178 FESLVFVRNSLLHIYAACGDTESAHKVFESMT------DRFALN---------GRPNEAL 222
+ V N+L+H A +++ + DR N G N+A+
Sbjct: 420 TDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAM 479
Query: 223 TLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLY 282
L++++S + + + T +++ + G L + + + + + L+ ++ N LL
Sbjct: 480 ELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL 539
Query: 283 AKCGSIREAQQVFGEMEERN----VVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGE 338
K GS+ +A ++F EM+ N VVS+ +I G G L+P
Sbjct: 540 CKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDL 599
Query: 339 ITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQ 398
T+ ++ G LDE +F +M + G P ++ G + E ++
Sbjct: 600 FTYSKLINRFLKLGYLDEAISFFDKMVDS-GFEPDAHICDSVLKYCISQGETDKLTELVK 658
Query: 399 NMPVQPNAVIWRTLLGACTIHGHL 422
+ V + V+ + L CT+ ++
Sbjct: 659 KL-VDKDIVLDKEL--TCTVMDYM 679
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 129/320 (40%), Gaps = 30/320 (9%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P++FT+NT+IRG + A R + + EPD +Y LL+A+ EGE L
Sbjct: 261 PDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKL 320
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMS 229
+ + V + L I C D G+ EA+ L + M
Sbjct: 321 MTKMFSEKCDPNVVTYSIL--ITTLCRD------------------GKIEEAMNLLKLMK 360
Query: 230 ANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIR 289
G+ PD ++ L++A G L++ ++ G ++ N +L K G
Sbjct: 361 EKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKAD 420
Query: 290 EAQQVFGEMEE----RNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVL 345
+A ++FG++ E N S+ T+ L +G + P EIT+ ++
Sbjct: 421 QALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMI 480
Query: 346 YACSHCGMLDEGFDYFRRMKE-EYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNM---P 401
GM+DE F+ M+ E+ P + Y ++ +A ++ A +++M
Sbjct: 481 SCLCREGMVDEAFELLVDMRSCEF--HPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Query: 402 VQPNAVIWRTLLGACTIHGH 421
+PN + L+ G+
Sbjct: 539 CRPNETTYTVLIEGIGFAGY 558
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 123/313 (39%), Gaps = 28/313 (8%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P+VF +N +I G+ + A +M PDT TY ++
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMI--------------- 200
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMS 229
S+ + + + V N LL C T + + T L G +EAL L EM
Sbjct: 201 GSLCSRGKLDLALKVLNQLLS--DNCQPTVITYTILIEAT---MLEGGVDEALKLMDEML 255
Query: 230 ANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIR 289
+ G++PD FT +++ + G ++ + L G ++ N LL G
Sbjct: 256 SRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWE 315
Query: 290 EAQQV----FGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVL 345
E +++ F E + NVV+++ LI L +G + L P ++ ++
Sbjct: 316 EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375
Query: 346 YACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEY---IQNMPV 402
A G LD ++ M + G P I +Y ++ L + G QA E + +
Sbjct: 376 AAFCREGRLDVAIEFLETMISD-GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGC 434
Query: 403 QPNAVIWRTLLGA 415
PN+ + T+ A
Sbjct: 435 SPNSSSYNTMFSA 447
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 116/353 (32%), Gaps = 62/353 (17%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
+P+ T+N MI AL Q+ +P TY L++A V E
Sbjct: 190 SPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALK 249
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREM 228
L + G + +F N++ I C E M DR A + R +
Sbjct: 250 LMDEMLSRGLKPDMFTYNTI--IRGMCK---------EGMVDR---------AFEMVRNL 289
Query: 229 SANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSI 288
G EPD + LL A G E G ++ + N+ + L+ + G I
Sbjct: 290 ELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKI 349
Query: 289 REAQQVFGEMEERNVV----SWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGV 344
EA + M+E+ + S+ LI G P + + V
Sbjct: 350 EEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTV 409
Query: 345 LYACSHCGMLDEGFDYFRRMKE----------------------------------EYGI 370
L G D+ + F ++ E GI
Sbjct: 410 LATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGI 469
Query: 371 APRIEHYGCMVDLLSRAGLVKQAYEYIQNM---PVQPNAVIWR-TLLGACTIH 419
P Y M+ L R G+V +A+E + +M P+ V + LLG C H
Sbjct: 470 DPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 522
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 142/352 (40%), Gaps = 25/352 (7%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P++ T ++++ GY + A+ QM PDT T+ L+ + E AL
Sbjct: 153 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL 212
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHK---------------VFESMTDRFAL 214
++ G + + +++ GD + A ++ ++ D
Sbjct: 213 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCK 272
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
++AL LF EM GV P+ T SL+S R+ +++ + N+
Sbjct: 273 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVT 332
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXX 330
NAL+D + K G + EA++++ EM +R ++ ++++LI G ++
Sbjct: 333 FNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 392
Query: 331 XQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLV 390
+ P +T+ ++ +DEG + FR M + G+ Y ++ +A
Sbjct: 393 SKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR-GLVGNTVTYTTLIHGFFQARDC 451
Query: 391 KQAYEYIQNM---PVQPNAVIWRTLLGACTIHGHLSLGEIARSHLL--KLEP 437
A + M V PN + + TLL +G L + +L K+EP
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 94/229 (41%), Gaps = 19/229 (8%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
NPNV T+N +I + + A Y +M ++PD TY L+ + E +
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------------FA 213
+ + I V N+L++ + + ++F M+ R F
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446
Query: 214 LNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
+ A +F++M ++GV P+ T +LL + G LE V YL ++ + ++
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 506
Query: 274 VVNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGF 318
N +++ K G + + +F + + +V+ + T+I G G
Sbjct: 507 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGL 555
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/388 (20%), Positives = 153/388 (39%), Gaps = 30/388 (7%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P++F +N ++ A+ + + +M + + +TY L+ + + AL
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------------FAL 214
+K G+E + +SLL+ Y A + + M + L
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
+ + +EA+ L M G +P+ T +++ + G ++L + + A + N+ +
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXX 330
+ ++D K +A +F EME + NV+++++LI L
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 331 XQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYG------CMVDLL 384
+K+ P +TF ++ A G L E + M + I P I Y CM D L
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRL 381
Query: 385 SRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLSLG-EIARSHLLKLEPKHSGDY 443
A K +E + + PN V + TL+ + G E+ R + ++ Y
Sbjct: 382 DEA---KHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTY 438
Query: 444 VLLSNLYASERRWTDVQTIRKSMLQDGV 471
L + + R + Q + K M+ DGV
Sbjct: 439 TTLIHGFFQARDCDNAQMVFKQMVSDGV 466
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 88/207 (42%), Gaps = 15/207 (7%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
+P++FT++++I G+ A H + M P+ TY L+ K+ + EG
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMT---------------DRFA 213
L + G +L+H + D ++A VF+ M D
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481
Query: 214 LNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
NG+ +A+ +F + + +EP +T ++ + G +E G + L G++ ++
Sbjct: 482 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 541
Query: 274 VVNALLDLYAKCGSIREAQQVFGEMEE 300
+ N ++ + + G EA +F +M E
Sbjct: 542 IYNTMISGFCRKGLKEEADALFRKMRE 568
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 108/261 (41%), Gaps = 15/261 (5%)
Query: 219 NEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNAL 278
++A+ LF M + P F LLSA A++ +L + + + G+ NL+ N L
Sbjct: 67 DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNIL 126
Query: 279 LDLYAKCGSIREAQQVFGEME----ERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKL 334
++ + + I A + G+M E ++V+ ++L+ G
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 335 APGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAY 394
P ITF +++ E RM + G P + YG +V+ L + G + A+
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQR-GCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 395 EYIQNM---PVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPK----HSGDYVLLS 447
+ M ++ N VI+ T++ + + H + A + ++E K + Y L
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRH---EDDALNLFTEMENKGVRPNVITYSSLI 302
Query: 448 NLYASERRWTDVQTIRKSMLQ 468
+ + RW+D + M++
Sbjct: 303 SCLCNYERWSDASRLLSDMIE 323
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 127/323 (39%), Gaps = 62/323 (19%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
PNV +NT+I+G + A +M+ + P+ T+ L+ + K V + + L
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMS 229
V I G+ +F N L+H Y+ E+A ++ + M D
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLD------------------- 489
Query: 230 ANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIR 289
NGV+PD +T SLL+ + E + +++ G NL N LL+ + +
Sbjct: 490 -NGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLD 548
Query: 290 EAQQVFGEMEERNV----VSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVL 345
EA + EM+ ++V V++ TLI G N
Sbjct: 549 EALGLLEEMKNKSVNPDAVTFGTLIDGFCKN----------------------------- 579
Query: 346 YACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMP---V 402
G LD + FR+M+E Y ++ Y ++ + V A + Q M +
Sbjct: 580 ------GDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCL 633
Query: 403 QPNAVIWRTLLGACTIHGHLSLG 425
P+ +R ++ G+++LG
Sbjct: 634 GPDGYTYRLMVDGFCKTGNVNLG 656
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 134/336 (39%), Gaps = 23/336 (6%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
PN+FT+N I+G + + A+ + +PD TY L+ + K+ +E E
Sbjct: 249 PNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVY 308
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKV---------------FESMTDRFAL 214
+ G E + N+L+ Y G + A ++ + S+ D
Sbjct: 309 LGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCH 368
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
G N AL LF E G++P+ +L+ + G + ++ + + GL +
Sbjct: 369 EGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQT 428
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXX 330
N L++ K G + +A + M + ++ ++ LI G +
Sbjct: 429 FNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVML 488
Query: 331 XQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLV 390
+ P T+ +L ++ + ++ M E+ G AP + + +++ L R +
Sbjct: 489 DNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK-GCAPNLFTFNILLESLCRYRKL 547
Query: 391 KQA---YEYIQNMPVQPNAVIWRTLLGACTIHGHLS 423
+A E ++N V P+AV + TL+ +G L
Sbjct: 548 DEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 103/261 (39%), Gaps = 24/261 (9%)
Query: 179 ESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------------FALNGRPNEALT 223
E VF N+++ + G + AHKV+ M DR F RP+ AL
Sbjct: 108 EPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALR 167
Query: 224 LFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYA 283
L MS+ G E + +++ E G + +L +G+ L N LL +
Sbjct: 168 LLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLC 227
Query: 284 KCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEI 339
K G ++E +++ ++ +R N+ ++ I GL G Q P I
Sbjct: 228 KKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVI 287
Query: 340 TFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQN 399
T+ ++Y E Y +M E G+ P Y ++ + G+V+ A + +
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMVNE-GLEPDSYTYNTLIAGYCKGGMVQLAERIVGD 346
Query: 400 MPVQ---PNAVIWRTLL-GAC 416
P+ +R+L+ G C
Sbjct: 347 AVFNGFVPDQFTYRSLIDGLC 367
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 126/329 (38%), Gaps = 24/329 (7%)
Query: 111 NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALH 170
NV + T++ G+ E + +M S V T+ LL+ + K +V+E E L
Sbjct: 180 NVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLL 239
Query: 171 SVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------------FALN 215
IK G +F N + G+ + A ++ + ++ N
Sbjct: 240 DKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKN 299
Query: 216 GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVV 275
+ EA +M G+EPD +T +L++ + G ++L R+ + G +
Sbjct: 300 SKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTY 359
Query: 276 NALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXXX 331
+L+D G A +F E + NV+ + TLI GL+ G
Sbjct: 360 RSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSE 419
Query: 332 QKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVK 391
+ L P TF ++ G + + D ++ G P I + ++ S ++
Sbjct: 420 KGLIPEVQTFNILVNGLCKMGCVSDA-DGLVKVMISKGYFPDIFTFNILIHGYSTQLKME 478
Query: 392 QAYEYIQNM---PVQPNAVIWRTLL-GAC 416
A E + M V P+ + +LL G C
Sbjct: 479 NALEILDVMLDNGVDPDVYTYNSLLNGLC 507
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/212 (17%), Positives = 88/212 (41%), Gaps = 16/212 (7%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
+P+V+T+N+++ G ++ + + Y+ M P+ T+ LL+++ + + E
Sbjct: 493 DPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALG 552
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRP---------- 218
L +L+ + GD + A+ +F M + + ++
Sbjct: 553 LLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAF 612
Query: 219 ------NEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENL 272
A LF+EM + PDG+T ++ + G + LG + + +++ G +L
Sbjct: 613 TEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSL 672
Query: 273 HVVNALLDLYAKCGSIREAQQVFGEMEERNVV 304
+ +++ + EA + M ++ +V
Sbjct: 673 TTLGRVINCLCVEDRVYEAAGIIHRMVQKGLV 704
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 137/350 (39%), Gaps = 28/350 (8%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P+ +NT++ G AL +M +P T L+ + + V + L
Sbjct: 156 PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVL 215
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------------FAL 214
++ GF+ +L++ G T A ++ M +R
Sbjct: 216 IDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
+G + A LF EM G + D T +L+ G + G ++ ++K + N+
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXX 330
+ L+D + K G +REA Q+ EM +R N +++ +LI G
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395
Query: 331 XQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLV 390
+ P +TF ++ +D+G + FR M G+ Y +V ++G +
Sbjct: 396 SKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLR-GVIANTVTYNTLVQGFCQSGKL 454
Query: 391 KQAYEYIQNMP---VQPNAVIWRTLLGACTIHGHLS-----LGEIARSHL 432
+ A + Q M V+P+ V ++ LL +G L G+I +S +
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKM 504
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 23/204 (11%)
Query: 100 AHLVFTMIR---NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKA 156
A L+ MI+ +PNV T++ +I + + + A ++M + P+T TY L+
Sbjct: 318 AKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDG 377
Query: 157 VSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNG 216
K + E + + I G + + N L++ Y
Sbjct: 378 FCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA--------------------N 417
Query: 217 RPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVN 276
R ++ L LFREMS GV + T +L+ + G LE+ +++ ++ +R ++
Sbjct: 418 RIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYK 477
Query: 277 ALLDLYAKCGSIREAQQVFGEMEE 300
LLD G + +A ++FG++E+
Sbjct: 478 ILLDGLCDNGELEKALEIFGKIEK 501
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/330 (19%), Positives = 136/330 (41%), Gaps = 24/330 (7%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P V +N + A+++ + L +QM + +T ++ + + +
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 170 HSVTIKNGFESLVFVRNSLLH-IYAACGDTES----------AHK----VFESMTDRFAL 214
+K G+E + N+LL+ + C +E+ HK ++ + L
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
NG+ ++A+ L M G +P+ T +L+ + G L + + + ++ +
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 275 VNALLDLYAKCGSIREAQQVFGEME----ERNVVSWTTLIVGLAVNGFGXXXXXXXXXXX 330
+ ++D K GS+ A +F EME + +++++ TLI G G
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 331 XQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLV 390
+K++P +TF ++ + G L E + M + GIAP Y ++D + +
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR-GIAPNTITYNSLIDGFCKENRL 384
Query: 391 KQAYEYIQNM---PVQPNAVIWRTLL-GAC 416
++A + + M P+ + + L+ G C
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYC 414
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 153/360 (42%), Gaps = 40/360 (11%)
Query: 113 FTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSV 172
+T+ T+++G S D A + ++M S P+ Y L+K + N R G+A+ +
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQ--NSRFGDAMRVL 475
Query: 173 T--IKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMSA 230
+ G +F NSL+ G +++ R +EA + EM
Sbjct: 476 KEMKEQGIAPDIFCYNSLI-----IGLSKAK---------------RMDEARSFLVEMVE 515
Query: 231 NGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIRE 290
NG++P+ FT + +S E + + + G+ N + L++ Y K G + E
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIE 575
Query: 291 AQQVFGEMEERNVV----SWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLY 346
A + M ++ ++ ++T L+ GL N + +AP ++ ++
Sbjct: 576 ACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Query: 347 ACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQ--- 403
S G + + F M EE G+ P + Y ++ R+G +++A E + M V+
Sbjct: 636 GFSKLGNMQKASSIFDEMVEE-GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 404 PNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSG---DYVLLSNLYASERRWTDVQ 460
PNAV + T+ I G+ G++A + L E K G D + + L R DV+
Sbjct: 695 PNAVTYCTI-----IDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 749
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 124/303 (40%), Gaps = 20/303 (6%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
PNV + T+I+ + ++ A+ ++M + PD Y L+ +SK+ + E +
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESM---------------TDRFAL 214
++NG + F + + Y + SA K + M + +
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCK 569
Query: 215 NGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
G+ EA + +R M G+ D T L++ + ++ + + G+ ++
Sbjct: 570 KGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFS 629
Query: 275 VNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXX 330
L++ ++K G++++A +F EM E NV+ + L+ G +G
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 331 XQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLV 390
+ L P +T+ ++ G L E F F MK + G+ P Y +VD R V
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK-GLVPDSFVYTTLVDGCCRLNDV 748
Query: 391 KQA 393
++A
Sbjct: 749 ERA 751
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 130/328 (39%), Gaps = 30/328 (9%)
Query: 129 KPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSL 188
+ A + M S + P Y L++ + NVR+G L K + ++
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423
Query: 189 LHIYAACGDTESAHKV---------------FESMTDRFALNGRPNEALTLFREMSANGV 233
+ + GD + A+ + + ++ F N R +A+ + +EM G+
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI 483
Query: 234 EPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQ 293
PD F SL+ ++ ++ R V +++ GL+ N A + Y + A +
Sbjct: 484 APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADK 543
Query: 294 VFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGM 353
EM E V+ L GL +N + + + I Y G+
Sbjct: 544 YVKEMRECGVLPNKVLCTGL-INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602
Query: 354 -----LDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQNM---PVQPN 405
+D+ + FR M+ + GIAP + YG +++ S+ G +++A M + PN
Sbjct: 603 FKNDKVDDAEEIFREMRGK-GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661
Query: 406 AVIWRTLLGACTIHGHLSLGEIARSHLL 433
+I+ LLG G GEI ++ L
Sbjct: 662 VIIYNMLLG-----GFCRSGEIEKAKEL 684
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 30/220 (13%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
PN T+ T+I GY +S D A + +M + + PD+ Y L+ + +V +
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTD-RFALNGRPNE-------- 220
T K G S N+L++ G TE +V + D F G+PN+
Sbjct: 755 FG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMID 813
Query: 221 ----------ALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVY-----LLK 265
A LF +M + P T SLL+ G ++GRR ++ +
Sbjct: 814 YLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN-----GYDKMGRRAEMFPVFDEAIA 868
Query: 266 AGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVS 305
AG+ + + + +++ + K G +A + +M +N V
Sbjct: 869 AGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVD 908
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 116/272 (42%), Gaps = 20/272 (7%)
Query: 214 LNGRPNEALT-LFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENL 272
L GR +A L EM ++G+ + + ++ G +E + + ++ +GL
Sbjct: 323 LKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQA 382
Query: 273 HVVNALLDLYAKCGSIREAQQVFGEMEERNVV----SWTTLIVGLAVNGFGXXXXXXXXX 328
+L++ Y + ++R+ ++ EM++RN+V ++ T++ G+ +G
Sbjct: 383 QAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKE 442
Query: 329 XXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAG 388
P + + ++ + + MKE+ GIAP I Y ++ LS+A
Sbjct: 443 MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ-GIAPDIFCYNSLIIGLSKAK 501
Query: 389 LVKQAYEYIQNM---PVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLEPKHSG---D 442
+ +A ++ M ++PNA + I G++ E A + E + G +
Sbjct: 502 RMDEARSFLVEMVENGLKPNAFTYGAF-----ISGYIEASEFASADKYVKEMRECGVLPN 556
Query: 443 YVL---LSNLYASERRWTDVQTIRKSMLQDGV 471
VL L N Y + + + + +SM+ G+
Sbjct: 557 KVLCTGLINEYCKKGKVIEACSAYRSMVDQGI 588
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 118/278 (42%), Gaps = 34/278 (12%)
Query: 146 DTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVF 205
D HTY ++ + ++ E L +++G + N L+H Y
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSY------------- 404
Query: 206 ESMTDRFALNGRPN---EALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVY 262
GR N EA+ +F +M G EPD T +L+ A+ G L++ ++
Sbjct: 405 ----------GRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQR 454
Query: 263 LLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGF 318
+ +AGL + + +++ K G + A ++F EM + N+V++ +I A
Sbjct: 455 MQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARN 514
Query: 319 GXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYG 378
P ++T+ V+ HCG L+E F M+ + + P YG
Sbjct: 515 YETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV-PDEPVYG 573
Query: 379 CMVDLLSRAGLVKQAYEYIQNM---PVQPNAVIWRTLL 413
+VDL +AG V +A+++ Q M ++PN +LL
Sbjct: 574 LLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLL 611
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 129/322 (40%), Gaps = 58/322 (18%)
Query: 102 LVFTMIRN---PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVS 158
L+ M+R+ PN T+N +I Y + K A++ + QM + EPD TY L+ +
Sbjct: 381 LLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHA 440
Query: 159 KSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRP 218
K+ + ++ + G F + +++ G +AH+
Sbjct: 441 KAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHR--------------- 485
Query: 219 NEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNAL 278
LF EM G P+ T +++ A+ E +++ + AG + + + +
Sbjct: 486 -----LFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIV 540
Query: 279 LDLYAKCGSIREAQQVFGEMEERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGE 338
+++ CG + EA+ VF EM+ +N V + GL V+ +G
Sbjct: 541 MEVLGHCGFLEEAEGVFAEMQRKNWVP-DEPVYGLLVDLWG------------------- 580
Query: 339 ITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQ 398
G +D+ + +++ M + G+ P + ++ R + +AY +Q
Sbjct: 581 -----------KAGNVDKAWQWYQAMLQA-GLRPNVPTCNSLLSTFLRVHRMSEAYNLLQ 628
Query: 399 NM---PVQPNAVIWRTLLGACT 417
+M + P+ + LL CT
Sbjct: 629 SMLALGLHPSLQTYTLLLSCCT 650
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 21/158 (13%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
PN+ T+N MI +A++++ + AL YR M + +PD TY +++ + + E E +
Sbjct: 497 PNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGV 556
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPN---------- 219
+ + + V L+ ++ G+ + A + +++M RPN
Sbjct: 557 FAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAM---LQAGLRPNVPTCNSLLST 613
Query: 220 --------EALTLFREMSANGVEPDGFTVVSLLSACAE 249
EA L + M A G+ P T LLS C +
Sbjct: 614 FLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTD 651
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 162/369 (43%), Gaps = 33/369 (8%)
Query: 102 LVFTMIRN---PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVS 158
L F M+ + P++ + ++ A + + ++F ++M + + D +++ L+
Sbjct: 58 LFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFC 117
Query: 159 KSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAAC---GD--------TESAHK---- 203
+ + ++ +K G+E + SLLH + GD +S ++
Sbjct: 118 RCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVV 177
Query: 204 VFESMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYL 263
V+ ++ D NG N AL L EM G+ D T +LL+ G R+ +
Sbjct: 178 VYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDM 237
Query: 264 LKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNV----VSWTTLIVGLAVNGFG 319
+K + ++ AL+D++ K G++ EAQ+++ EM + +V V++ ++I GL ++G
Sbjct: 238 MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRL 297
Query: 320 XXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGC 379
+ P +T+ ++ M+DEG F+RM E G I Y
Sbjct: 298 YDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE-GFNADIFTYNT 356
Query: 380 MVDLLSRAGLVKQAYE---YIQNMPVQPNAVIWRTLLGACTIHGHLSLGEIARSHLLKLE 436
++ + G ++ A + ++ + V P+ + LL HG GEI S L+K +
Sbjct: 357 LIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILL-----HGLCVNGEI-ESALVKFD 410
Query: 437 P-KHSGDYV 444
+ S Y+
Sbjct: 411 DMRESEKYI 419
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 137/341 (40%), Gaps = 62/341 (18%)
Query: 102 LVFTMIRN---PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVS 158
LV M+++ PNV +NT+I G ++ + AL +M + D TY LL +
Sbjct: 163 LVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222
Query: 159 KSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFE------------ 206
S + + +K V +L+ ++ G+ + A ++++
Sbjct: 223 YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282
Query: 207 ---SMTDRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYL 263
S+ + ++GR +A F M++ G P+ T +L+S + ++ G ++ +
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Query: 264 LKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFG 319
G ++ N L+ Y + G +R A +F M R ++++ L+ GL VNG
Sbjct: 343 SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNG-- 400
Query: 320 XXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGC 379
EI V FD R ++ GI Y
Sbjct: 401 ------------------EIESALV------------KFDDMRESEKYIGIVA----YNI 426
Query: 380 MVDLLSRAGLVKQAYEYIQNMPVQ---PNAVIWRTL-LGAC 416
M+ L +A V++A+E +PV+ P+A + + LG C
Sbjct: 427 MIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLC 467
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/366 (19%), Positives = 142/366 (38%), Gaps = 62/366 (16%)
Query: 93 LSAPMSYAHLVFTMIRNPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPF 152
+S +S + M P+ FT+NT+I G A+ +M + +PD TY
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226
Query: 153 LLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRF 212
++ + K G+ ++++ E G E ++ ++ D
Sbjct: 227 VVNGLCK-----RGDIDLALSLLKKMEQ---------------GKIEPGVVIYNTIIDAL 266
Query: 213 ALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENL 272
N+AL LF EM G+ P+ T SL+ G R+ +++ + N+
Sbjct: 267 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 326
Query: 273 HVVNALLDLYAKCGSIREAQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXX 328
+AL+D + K G + EA++++ EM +R ++ ++++LI G ++
Sbjct: 327 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 386
Query: 329 XXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKE---------------------- 366
+ P +T+ ++ +DEG + FR M +
Sbjct: 387 MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARE 446
Query: 367 ------------EYGIAPRIEHYGCMVDLLSRAGLVKQA---YEYIQNMPVQPNAVIWRT 411
G+ P I Y ++D L G V+ A +EY+Q ++P+ +
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNI 506
Query: 412 LL-GAC 416
++ G C
Sbjct: 507 MIEGMC 512
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 143/361 (39%), Gaps = 30/361 (8%)
Query: 63 LKQIHAFSIRHGVPLHNPDMGKHLIFTIVSLSAPMSYAHLVFTMIRN----PNVFTWNTM 118
LK++ I GV ++N I + ++ A +FT + N PNV T+N++
Sbjct: 244 LKKMEQGKIEPGVVIYNT------IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 119 IRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALHSVTIKNGF 178
IR A M + P+ T+ L+ A K + E E L+ IK
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 179 ESLVFVRNSLLHIYAACGDTESAHKVFESMTDR---------------FALNGRPNEALT 223
+ +F +SL++ + + A +FE M + F R +E +
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 224 LFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYA 283
LFREMS G+ + T +L+ + + + V ++ G+ ++ + LLD
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477
Query: 284 KCGSIREAQQVFGEME----ERNVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEI 339
G + A VF ++ E ++ ++ +I G+ G + + P +
Sbjct: 478 NNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVV 537
Query: 340 TFVGVLYACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYGCMVDLLSRAGLVKQAYEYIQN 399
T+ ++ G+ +E FR MKEE G P Y ++ R G + E I+
Sbjct: 538 TYTTMMSGFCRKGLKEEADALFREMKEE-GPLPDSGTYNTLIRAHLRDGDKAASAELIRE 596
Query: 400 M 400
M
Sbjct: 597 M 597
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 146/372 (39%), Gaps = 35/372 (9%)
Query: 111 NVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEALH 170
N++T++ +I + AL +M EPD T LL + + +L
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 171 SVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPNEALTLFREMSA 230
++ G++ F N+L+ H +F + R +EA+ L M
Sbjct: 175 GQMVEMGYQPDSFTFNTLI------------HGLFR--------HNRASEAVALVDRMVV 214
Query: 231 NGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIRE 290
G +PD T +++ + G ++L + + + + + + N ++D ++ +
Sbjct: 215 KGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND 274
Query: 291 AQQVFGEMEER----NVVSWTTLIVGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLY 346
A +F EM+ + NVV++ +LI L G +K+ P +TF ++
Sbjct: 275 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 334
Query: 347 ACSHCGMLDEGFDYFRRMKEEYGIAPRIEHYG------CMVDLLSRAGLVKQAYEYIQNM 400
A G L E + M + I P I Y CM D L A K +E + +
Sbjct: 335 AFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRLDEA---KHMFELMISK 390
Query: 401 PVQPNAVIWRTLL-GACTIHGHLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWTDV 459
PN V + TL+ G C E+ R + ++ Y L + + R +
Sbjct: 391 DCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNA 450
Query: 460 QTIRKSMLQDGV 471
Q + K M+ DGV
Sbjct: 451 QIVFKQMVSDGV 462
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 110/269 (40%), Gaps = 20/269 (7%)
Query: 109 NPNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEA 168
+P++FT++++I G+ A H + M P+ TY L+K K+ V EG
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 169 LHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMT---------------DRFA 213
L + G +L+H + + ++A VF+ M D
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477
Query: 214 LNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLH 273
NG+ AL +F + + +EPD +T ++ + G +E G + L G++ N+
Sbjct: 478 NNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVV 537
Query: 274 VVNALLDLYAKCGSIREAQQVFGEMEERNVV----SWTTLIVGLAVNGFGXXXXXXXXXX 329
++ + + G EA +F EM+E + ++ TLI +G
Sbjct: 538 TYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Query: 330 XXQKLAPGEITFVGVLYACSHCGMLDEGF 358
+ G+ + +G++ H G LD+ F
Sbjct: 598 RSCRFV-GDASTIGLVTNMLHDGRLDKSF 625
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 118/286 (41%), Gaps = 50/286 (17%)
Query: 146 DTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVF 205
D HTY ++ + ++ L +++G + N L+H Y A VF
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 206 ESMT---------------DRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAEL 250
M D A G + A+ +++ M A G+ PD FT +++ +
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 251 GALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLI 310
G L ++ ++ G NL N ++DL+AK + + A +++ +M+
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA--------- 533
Query: 311 VGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGI 370
GF P ++T+ V+ HCG L+E F M+++ I
Sbjct: 534 ------GF----------------EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Query: 371 APRIEHYGCMVDLLSRAGLVKQAYEYIQNM---PVQPNAVIWRTLL 413
P YG +VDL +AG V++A+++ Q M ++PN +LL
Sbjct: 572 -PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLL 616
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 89/218 (40%), Gaps = 24/218 (11%)
Query: 102 LVFTMIRN---PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVS 158
L+ M+R+ PN T+N +I Y + A++ + QM + +PD TY L+ +
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 159 KSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRP 218
K+ + ++ G F + +++ G +AHK+F M D+ P
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCT---P 502
Query: 219 N------------------EALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVH 260
N AL L+R+M G EPD T ++ G LE V
Sbjct: 503 NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 562
Query: 261 VYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEM 298
+ + + V L+DL+ K G++ +A Q + M
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 88/204 (43%), Gaps = 15/204 (7%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P+ T+ T+I +A++ A+ Y++M + PDT TY ++ + K+ ++ L
Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKL 491
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMT------DRFALN-------- 215
+ G + N ++ ++A + ++A K++ M D+ +
Sbjct: 492 FCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGH 551
Query: 216 -GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
G EA +F EM PD L+ + G +E + + +L AGLR N+
Sbjct: 552 CGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPT 611
Query: 275 VNALLDLYAKCGSIREAQQVFGEM 298
N+LL + + I EA ++ M
Sbjct: 612 CNSLLSTFLRVNKIAEAYELLQNM 635
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 101/247 (40%), Gaps = 56/247 (22%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
PN+ T+N M+ +A++++ + AL YR M + EPD TY +++ + + E EA+
Sbjct: 502 PNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAV 561
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPN---------- 219
+ + + V L+ ++ G+ E A + +++M RPN
Sbjct: 562 FTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM---LHAGLRPNVPTCNSLLST 618
Query: 220 --------EALTLFREMSANGVEPDGFTVVSLLSACAE---------LGAL--ELGRRVH 260
EA L + M A G+ P T LLS C + G L G H
Sbjct: 619 FLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAH 678
Query: 261 VYLLK---AGLR-ENLH--------------------VVNALLDLYAKCGSIREAQQVFG 296
++LLK AG EN+ +V+A++D K G EA V+
Sbjct: 679 MFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWE 738
Query: 297 EMEERNV 303
++NV
Sbjct: 739 VAAQKNV 745
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 118/286 (41%), Gaps = 50/286 (17%)
Query: 146 DTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVF 205
D HTY ++ + ++ L +++G + N L+H Y A VF
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 206 ESMT---------------DRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAEL 250
M D A G + A+ +++ M A G+ PD FT +++ +
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 251 GALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLI 310
G L ++ ++ G NL N ++DL+AK + + A +++ +M+
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA--------- 533
Query: 311 VGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGI 370
GF P ++T+ V+ HCG L+E F M+++ I
Sbjct: 534 ------GF----------------EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Query: 371 APRIEHYGCMVDLLSRAGLVKQAYEYIQNM---PVQPNAVIWRTLL 413
P YG +VDL +AG V++A+++ Q M ++PN +LL
Sbjct: 572 -PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLL 616
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 89/218 (40%), Gaps = 24/218 (11%)
Query: 102 LVFTMIRN---PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVS 158
L+ M+R+ PN T+N +I Y + A++ + QM + +PD TY L+ +
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 159 KSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRP 218
K+ + ++ G F + +++ G +AHK+F M D+ P
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCT---P 502
Query: 219 N------------------EALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVH 260
N AL L+R+M G EPD T ++ G LE V
Sbjct: 503 NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 562
Query: 261 VYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEM 298
+ + + V L+DL+ K G++ +A Q + M
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 88/204 (43%), Gaps = 15/204 (7%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P+ T+ T+I +A++ A+ Y++M + PDT TY ++ + K+ ++ L
Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKL 491
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMT------DRFALN-------- 215
+ G + N ++ ++A + ++A K++ M D+ +
Sbjct: 492 FCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGH 551
Query: 216 -GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
G EA +F EM PD L+ + G +E + + +L AGLR N+
Sbjct: 552 CGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPT 611
Query: 275 VNALLDLYAKCGSIREAQQVFGEM 298
N+LL + + I EA ++ M
Sbjct: 612 CNSLLSTFLRVNKIAEAYELLQNM 635
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 101/247 (40%), Gaps = 56/247 (22%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
PN+ T+N M+ +A++++ + AL YR M + EPD TY +++ + + E EA+
Sbjct: 502 PNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAV 561
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPN---------- 219
+ + + V L+ ++ G+ E A + +++M RPN
Sbjct: 562 FTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM---LHAGLRPNVPTCNSLLST 618
Query: 220 --------EALTLFREMSANGVEPDGFTVVSLLSACAE---------LGAL--ELGRRVH 260
EA L + M A G+ P T LLS C + G L G H
Sbjct: 619 FLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAH 678
Query: 261 VYLLK---AGLR-ENLH--------------------VVNALLDLYAKCGSIREAQQVFG 296
++LLK AG EN+ +V+A++D K G EA V+
Sbjct: 679 MFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWE 738
Query: 297 EMEERNV 303
++NV
Sbjct: 739 VAAQKNV 745
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 118/286 (41%), Gaps = 50/286 (17%)
Query: 146 DTHTYPFLLKAVSKSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVF 205
D HTY ++ + ++ L +++G + N L+H Y A VF
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 206 ESMT---------------DRFALNGRPNEALTLFREMSANGVEPDGFTVVSLLSACAEL 250
M D A G + A+ +++ M A G+ PD FT +++ +
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 251 GALELGRRVHVYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEMEERNVVSWTTLI 310
G L ++ ++ G NL N ++DL+AK + + A +++ +M+
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA--------- 533
Query: 311 VGLAVNGFGXXXXXXXXXXXXQKLAPGEITFVGVLYACSHCGMLDEGFDYFRRMKEEYGI 370
GF P ++T+ V+ HCG L+E F M+++ I
Sbjct: 534 ------GF----------------EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Query: 371 APRIEHYGCMVDLLSRAGLVKQAYEYIQNM---PVQPNAVIWRTLL 413
P YG +VDL +AG V++A+++ Q M ++PN +LL
Sbjct: 572 -PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLL 616
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 89/218 (40%), Gaps = 24/218 (11%)
Query: 102 LVFTMIRN---PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVS 158
L+ M+R+ PN T+N +I Y + A++ + QM + +PD TY L+ +
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 159 KSLNVREGEALHSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRP 218
K+ + ++ G F + +++ G +AHK+F M D+ P
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCT---P 502
Query: 219 N------------------EALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVH 260
N AL L+R+M G EPD T ++ G LE V
Sbjct: 503 NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 562
Query: 261 VYLLKAGLRENLHVVNALLDLYAKCGSIREAQQVFGEM 298
+ + + V L+DL+ K G++ +A Q + M
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 88/204 (43%), Gaps = 15/204 (7%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
P+ T+ T+I +A++ A+ Y++M + PDT TY ++ + K+ ++ L
Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKL 491
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMT------DRFALN-------- 215
+ G + N ++ ++A + ++A K++ M D+ +
Sbjct: 492 FCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGH 551
Query: 216 -GRPNEALTLFREMSANGVEPDGFTVVSLLSACAELGALELGRRVHVYLLKAGLRENLHV 274
G EA +F EM PD L+ + G +E + + +L AGLR N+
Sbjct: 552 CGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPT 611
Query: 275 VNALLDLYAKCGSIREAQQVFGEM 298
N+LL + + I EA ++ M
Sbjct: 612 CNSLLSTFLRVNKIAEAYELLQNM 635
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 101/247 (40%), Gaps = 56/247 (22%)
Query: 110 PNVFTWNTMIRGYAESQDPKPALHFYRQMTMSCVEPDTHTYPFLLKAVSKSLNVREGEAL 169
PN+ T+N M+ +A++++ + AL YR M + EPD TY +++ + + E EA+
Sbjct: 502 PNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAV 561
Query: 170 HSVTIKNGFESLVFVRNSLLHIYAACGDTESAHKVFESMTDRFALNGRPN---------- 219
+ + + V L+ ++ G+ E A + +++M RPN
Sbjct: 562 FTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM---LHAGLRPNVPTCNSLLST 618
Query: 220 --------EALTLFREMSANGVEPDGFTVVSLLSACAE---------LGAL--ELGRRVH 260
EA L + M A G+ P T LLS C + G L G H
Sbjct: 619 FLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAH 678
Query: 261 VYLLK---AGLR-ENLH--------------------VVNALLDLYAKCGSIREAQQVFG 296
++LLK AG EN+ +V+A++D K G EA V+
Sbjct: 679 MFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWE 738
Query: 297 EMEERNV 303
++NV
Sbjct: 739 VAAQKNV 745