Miyakogusa Predicted Gene
- Lj6g3v1946420.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1946420.1 Non Chatacterized Hit- tr|I1M1H9|I1M1H9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51086
PE,54.83,0,coiled-coil,NULL; TCP,Transcription factor, TCP; seg,NULL;
TCP,Transcription factor TCP subgroup; R,,CUFF.60279.1
(415 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G18390.2 | Symbols: TCP2 | TEOSINTE BRANCHED 1, cycloidea and... 187 2e-47
AT4G18390.1 | Symbols: TCP2 | TEOSINTE BRANCHED 1, cycloidea and... 187 2e-47
AT1G30210.2 | Symbols: TCP24 | TEOSINTE BRANCHED 1, cycloidea, a... 147 2e-35
AT1G30210.1 | Symbols: TCP24, ATTCP24 | TEOSINTE BRANCHED 1, cyc... 147 2e-35
AT3G02150.2 | Symbols: PTF1, TFPD | plastid transcription factor... 122 3e-28
AT3G02150.1 | Symbols: PTF1, TCP13, TFPD | plastid transcription... 122 5e-28
AT5G60970.1 | Symbols: TCP5 | TEOSINTE BRANCHED 1, cycloidea and... 117 1e-26
AT5G08070.1 | Symbols: TCP17 | TCP domain protein 17 | chr5:2584... 112 4e-25
AT2G31070.1 | Symbols: TCP10 | TCP domain protein 10 | chr2:1322... 105 5e-23
AT3G15030.3 | Symbols: TCP4 | TCP family transcription factor 4 ... 103 2e-22
AT3G15030.2 | Symbols: TCP4 | TCP family transcription factor 4 ... 103 2e-22
AT3G15030.1 | Symbols: TCP4, MEE35 | TCP family transcription fa... 103 2e-22
AT1G53230.1 | Symbols: TCP3 | TEOSINTE BRANCHED 1, cycloidea and... 102 7e-22
AT1G67260.2 | Symbols: TCP1 | TCP family transcription factor |... 85 9e-17
AT1G67260.1 | Symbols: TCP1 | TCP family transcription factor |... 85 1e-16
AT1G68800.1 | Symbols: BRC2, TCP12 | TCP domain protein 12 | chr... 73 4e-13
AT3G18550.2 | Symbols: BRC1, TCP18, ATTCP18 | TCP family transcr... 67 2e-11
AT3G18550.1 | Symbols: BRC1, TCP18, ATTCP18 | TCP family transcr... 67 2e-11
>AT4G18390.2 | Symbols: TCP2 | TEOSINTE BRANCHED 1, cycloidea and
PCF transcription factor 2 | chr4:10163212-10164309
REVERSE LENGTH=365
Length = 365
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 155/416 (37%), Positives = 189/416 (45%), Gaps = 99/416 (23%)
Query: 25 SSWHNNSSRIVRVSRASGGKDRHSKVMTSKGLRDRRVRLSVSTAIQFYDLQDRLGVDQPS 84
S WH+NSSRI+RVSRASGGKDRHSKV+TSKG RDRRVRLSVSTA+QFYDLQDRLG DQPS
Sbjct: 24 SRWHHNSSRIIRVSRASGGKDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYDQPS 83
Query: 85 KAVDWLIKAAEDAISELPSLNNLFPETPQQQSDHEXXXXXXXXXXXXXXXX-XXXXETSK 143
KAV+WLIKAAED+ISELPSLNN P +H+ +TSK
Sbjct: 84 KAVEWLIKAAEDSISELPSLNNT--HFPTDDENHQNQTLTTVAANSLSKSACSSNSDTSK 141
Query: 144 GSGGLSLSRCENRVXXXXXXXXXXXXXXXNESSIAHNVNNNHHHMSQTASFTELLXXXXX 203
S GLSLSR E R E + +H+H SFT+LL
Sbjct: 142 NSSGLSLSRSELR---------DKARERARERTAKETKERDHNH----TSFTDLLNSGSD 188
Query: 204 XXXXXXXXXXXXXXXXHQTHGGHHQWSSTV---TPMDYFSSGLLMGHXXXXXXXXXXXXX 260
+ QW ++ +PM+YFSSGL++G
Sbjct: 189 PV------------------NSNRQWMASAPSSSPMEYFSSGLILG-------------- 216
Query: 261 XXXXXXGQIQLGHSLPVSPFSG------ENHSDQMQRFSFMPEHLMVTSSSCSTQPSGIS 314
Q S PFS + Q Q FSF+P+HL+ S S
Sbjct: 217 ----SGQQTHFPISTNSHPFSSISDHHHHHPHHQHQEFSFVPDHLI------SPAESNGG 266
Query: 315 DYNLNFTISPGLA-------------AGYNRGTXXXXXXXXXXX-XXXXXRFXXXXXXXX 360
+NL+F +S +G+NRGT RF
Sbjct: 267 AFNLDFNMSTPSGAGAAVSAASGGGFSGFNRGTLQSNSTNQHQSFLANLQRFPTSESGGG 326
Query: 361 XXXXXLPFFMGGAAAAPSTMENHHHLQFSPLFDGRLQLCYGDGSRN-SDQKGKGKN 415
P F+ GA A ENHHH + + QL Y +G RN S+ KGKGKN
Sbjct: 327 ------PQFLFGALPA----ENHHH-------NHQFQLYYENGCRNSSEHKGKGKN 365
>AT4G18390.1 | Symbols: TCP2 | TEOSINTE BRANCHED 1, cycloidea and
PCF transcription factor 2 | chr4:10163212-10164309
REVERSE LENGTH=365
Length = 365
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 155/416 (37%), Positives = 189/416 (45%), Gaps = 99/416 (23%)
Query: 25 SSWHNNSSRIVRVSRASGGKDRHSKVMTSKGLRDRRVRLSVSTAIQFYDLQDRLGVDQPS 84
S WH+NSSRI+RVSRASGGKDRHSKV+TSKG RDRRVRLSVSTA+QFYDLQDRLG DQPS
Sbjct: 24 SRWHHNSSRIIRVSRASGGKDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYDQPS 83
Query: 85 KAVDWLIKAAEDAISELPSLNNLFPETPQQQSDHEXXXXXXXXXXXXXXXX-XXXXETSK 143
KAV+WLIKAAED+ISELPSLNN P +H+ +TSK
Sbjct: 84 KAVEWLIKAAEDSISELPSLNNT--HFPTDDENHQNQTLTTVAANSLSKSACSSNSDTSK 141
Query: 144 GSGGLSLSRCENRVXXXXXXXXXXXXXXXNESSIAHNVNNNHHHMSQTASFTELLXXXXX 203
S GLSLSR E R E + +H+H SFT+LL
Sbjct: 142 NSSGLSLSRSELR---------DKARERARERTAKETKERDHNH----TSFTDLLNSGSD 188
Query: 204 XXXXXXXXXXXXXXXXHQTHGGHHQWSSTV---TPMDYFSSGLLMGHXXXXXXXXXXXXX 260
+ QW ++ +PM+YFSSGL++G
Sbjct: 189 PV------------------NSNRQWMASAPSSSPMEYFSSGLILG-------------- 216
Query: 261 XXXXXXGQIQLGHSLPVSPFSG------ENHSDQMQRFSFMPEHLMVTSSSCSTQPSGIS 314
Q S PFS + Q Q FSF+P+HL+ S S
Sbjct: 217 ----SGQQTHFPISTNSHPFSSISDHHHHHPHHQHQEFSFVPDHLI------SPAESNGG 266
Query: 315 DYNLNFTISPGLA-------------AGYNRGTXXXXXXXXXXX-XXXXXRFXXXXXXXX 360
+NL+F +S +G+NRGT RF
Sbjct: 267 AFNLDFNMSTPSGAGAAVSAASGGGFSGFNRGTLQSNSTNQHQSFLANLQRFPTSESGGG 326
Query: 361 XXXXXLPFFMGGAAAAPSTMENHHHLQFSPLFDGRLQLCYGDGSRN-SDQKGKGKN 415
P F+ GA A ENHHH + + QL Y +G RN S+ KGKGKN
Sbjct: 327 ------PQFLFGALPA----ENHHH-------NHQFQLYYENGCRNSSEHKGKGKN 365
>AT1G30210.2 | Symbols: TCP24 | TEOSINTE BRANCHED 1, cycloidea, and
PCF family 24 | chr1:10628754-10629728 REVERSE
LENGTH=324
Length = 324
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/110 (65%), Positives = 85/110 (77%)
Query: 7 QEQVSKFPRIENGTTFQSSSWHNNSSRIVRVSRASGGKDRHSKVMTSKGLRDRRVRLSVS 66
++Q K R T +W+N SSRI+RVSRASGGKDRHSKV+TSKGLRDRR+RLSV+
Sbjct: 14 EQQSRKLQRFSEDNTGLMRNWNNPSSRIIRVSRASGGKDRHSKVLTSKGLRDRRIRLSVA 73
Query: 67 TAIQFYDLQDRLGVDQPSKAVDWLIKAAEDAISELPSLNNLFPETPQQQS 116
TAIQFYDLQDRLG DQPSKAV+WLI AA D+I++LP LN F Q Q+
Sbjct: 74 TAIQFYDLQDRLGFDQPSKAVEWLINAASDSITDLPLLNTNFDHLDQNQN 123
>AT1G30210.1 | Symbols: TCP24, ATTCP24 | TEOSINTE BRANCHED 1,
cycloidea, and PCF family 24 | chr1:10628754-10629728
REVERSE LENGTH=324
Length = 324
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/110 (65%), Positives = 85/110 (77%)
Query: 7 QEQVSKFPRIENGTTFQSSSWHNNSSRIVRVSRASGGKDRHSKVMTSKGLRDRRVRLSVS 66
++Q K R T +W+N SSRI+RVSRASGGKDRHSKV+TSKGLRDRR+RLSV+
Sbjct: 14 EQQSRKLQRFSEDNTGLMRNWNNPSSRIIRVSRASGGKDRHSKVLTSKGLRDRRIRLSVA 73
Query: 67 TAIQFYDLQDRLGVDQPSKAVDWLIKAAEDAISELPSLNNLFPETPQQQS 116
TAIQFYDLQDRLG DQPSKAV+WLI AA D+I++LP LN F Q Q+
Sbjct: 74 TAIQFYDLQDRLGFDQPSKAVEWLINAASDSITDLPLLNTNFDHLDQNQN 123
>AT3G02150.2 | Symbols: PTF1, TFPD | plastid transcription factor 1
| chr3:391522-392589 FORWARD LENGTH=355
Length = 355
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/72 (80%), Positives = 63/72 (87%)
Query: 33 RIVRVSRASGGKDRHSKVMTSKGLRDRRVRLSVSTAIQFYDLQDRLGVDQPSKAVDWLIK 92
RIVRVSRA GGKDRHSKV T +GLRDRRVRLSV TAIQ YDLQ+RLGVDQPSKAVDWL+
Sbjct: 64 RIVRVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLD 123
Query: 93 AAEDAISELPSL 104
AA++ I ELP L
Sbjct: 124 AAKEEIDELPPL 135
>AT3G02150.1 | Symbols: PTF1, TCP13, TFPD | plastid transcription
factor 1 | chr3:391522-392450 FORWARD LENGTH=278
Length = 278
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 58/72 (80%), Positives = 63/72 (87%)
Query: 33 RIVRVSRASGGKDRHSKVMTSKGLRDRRVRLSVSTAIQFYDLQDRLGVDQPSKAVDWLIK 92
RIVRVSRA GGKDRHSKV T +GLRDRRVRLSV TAIQ YDLQ+RLGVDQPSKAVDWL+
Sbjct: 64 RIVRVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLD 123
Query: 93 AAEDAISELPSL 104
AA++ I ELP L
Sbjct: 124 AAKEEIDELPPL 135
>AT5G60970.1 | Symbols: TCP5 | TEOSINTE BRANCHED 1, cycloidea and
PCF transcription factor 5 | chr5:24535570-24536652
REVERSE LENGTH=360
Length = 360
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 65/83 (78%), Gaps = 6/83 (7%)
Query: 33 RIVRVSRASGGKDRHSKVMTSKGLRDRRVRLSVSTAIQFYDLQDRLGVDQPSKAVDWLIK 92
RIVRVSR GGKDRHSKV T +GLRDRR+RLSV TAIQ YDLQDRLG+ QPSK +DWL++
Sbjct: 53 RIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLLE 112
Query: 93 AAEDAISELPSL------NNLFP 109
AA+D + +LP L N ++P
Sbjct: 113 AAKDDVDKLPPLQFPHGFNQMYP 135
>AT5G08070.1 | Symbols: TCP17 | TCP domain protein 17 |
chr5:2584885-2585613 FORWARD LENGTH=242
Length = 242
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Query: 30 NSSRIVRVSRASGGKDRHSKVMTSKGLRDRRVRLSVSTAIQFYDLQDRLGVDQPSKAVDW 89
N+ RIVRVSRA GGKDRHSKV T +GLRDRR+RLSV TAIQ YDLQ+RLG+ QPSK +DW
Sbjct: 20 NNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVIDW 79
Query: 90 LIKAAEDAISELPSLNNLFP 109
L++ A++ + LP L FP
Sbjct: 80 LLEVAKNDVDLLPPLQ--FP 97
>AT2G31070.1 | Symbols: TCP10 | TCP domain protein 10 |
chr2:13220984-13222069 REVERSE LENGTH=361
Length = 361
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 49/65 (75%), Positives = 55/65 (84%)
Query: 37 VSRASGGKDRHSKVMTSKGLRDRRVRLSVSTAIQFYDLQDRLGVDQPSKAVDWLIKAAED 96
+ RA+G KDRHSKV TSKG RDRRVRLS TAIQFYD+QDRLG D+PSKAVDWLIK A+
Sbjct: 23 IIRATGRKDRHSKVFTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKT 82
Query: 97 AISEL 101
AI +L
Sbjct: 83 AIDKL 87
>AT3G15030.3 | Symbols: TCP4 | TCP family transcription factor 4 |
chr3:5062308-5063570 FORWARD LENGTH=420
Length = 420
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 56/68 (82%)
Query: 37 VSRASGGKDRHSKVMTSKGLRDRRVRLSVSTAIQFYDLQDRLGVDQPSKAVDWLIKAAED 96
+ R++G KDRHSKV T+KG RDRRVRLS TAIQFYD+QDRLG D+PSKAVDWLIK A+
Sbjct: 39 IVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIKKAKT 98
Query: 97 AISELPSL 104
+I EL L
Sbjct: 99 SIDELAEL 106
>AT3G15030.2 | Symbols: TCP4 | TCP family transcription factor 4 |
chr3:5062308-5063570 FORWARD LENGTH=420
Length = 420
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 56/68 (82%)
Query: 37 VSRASGGKDRHSKVMTSKGLRDRRVRLSVSTAIQFYDLQDRLGVDQPSKAVDWLIKAAED 96
+ R++G KDRHSKV T+KG RDRRVRLS TAIQFYD+QDRLG D+PSKAVDWLIK A+
Sbjct: 39 IVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIKKAKT 98
Query: 97 AISELPSL 104
+I EL L
Sbjct: 99 SIDELAEL 106
>AT3G15030.1 | Symbols: TCP4, MEE35 | TCP family transcription
factor 4 | chr3:5062308-5063570 FORWARD LENGTH=420
Length = 420
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 56/68 (82%)
Query: 37 VSRASGGKDRHSKVMTSKGLRDRRVRLSVSTAIQFYDLQDRLGVDQPSKAVDWLIKAAED 96
+ R++G KDRHSKV T+KG RDRRVRLS TAIQFYD+QDRLG D+PSKAVDWLIK A+
Sbjct: 39 IVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIKKAKT 98
Query: 97 AISELPSL 104
+I EL L
Sbjct: 99 SIDELAEL 106
>AT1G53230.1 | Symbols: TCP3 | TEOSINTE BRANCHED 1, cycloidea and
PCF transcription factor 3 | chr1:19850260-19851435
REVERSE LENGTH=391
Length = 391
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 55/68 (80%)
Query: 37 VSRASGGKDRHSKVMTSKGLRDRRVRLSVSTAIQFYDLQDRLGVDQPSKAVDWLIKAAED 96
+ R++G KDRHSKV T+KG RDRRVRLS TAIQFYD+QDRLG D+PSKAVDWLI A+
Sbjct: 43 IVRSTGRKDRHSKVCTAKGPRDRRVRLSAPTAIQFYDVQDRLGFDRPSKAVDWLITKAKS 102
Query: 97 AISELPSL 104
AI +L L
Sbjct: 103 AIDDLAQL 110
>AT1G67260.2 | Symbols: TCP1 | TCP family transcription factor |
chr1:25168152-25169307 REVERSE LENGTH=351
Length = 351
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 48/64 (75%)
Query: 44 KDRHSKVMTSKGLRDRRVRLSVSTAIQFYDLQDRLGVDQPSKAVDWLIKAAEDAISELPS 103
KDRHSK+ T++G+RDRRVRLS+ A QF+DLQD LG D+ SK +DWL+K + AI E+
Sbjct: 88 KDRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKSRKAIKEVVQ 147
Query: 104 LNNL 107
NL
Sbjct: 148 AKNL 151
>AT1G67260.1 | Symbols: TCP1 | TCP family transcription factor |
chr1:25168228-25169307 REVERSE LENGTH=359
Length = 359
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 48/64 (75%)
Query: 44 KDRHSKVMTSKGLRDRRVRLSVSTAIQFYDLQDRLGVDQPSKAVDWLIKAAEDAISELPS 103
KDRHSK+ T++G+RDRRVRLS+ A QF+DLQD LG D+ SK +DWL+K + AI E+
Sbjct: 88 KDRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKSRKAIKEVVQ 147
Query: 104 LNNL 107
NL
Sbjct: 148 AKNL 151
>AT1G68800.1 | Symbols: BRC2, TCP12 | TCP domain protein 12 |
chr1:25847306-25848471 REVERSE LENGTH=356
Length = 356
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 51/72 (70%)
Query: 30 NSSRIVRVSRASGGKDRHSKVMTSKGLRDRRVRLSVSTAIQFYDLQDRLGVDQPSKAVDW 89
++S+ V+ R +DRHSK+ T++G RDRR+RLS+ A +F+DLQD LG D+ SK ++W
Sbjct: 99 STSQEVQWRRTVKKRDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEW 158
Query: 90 LIKAAEDAISEL 101
L ++ +I +L
Sbjct: 159 LFSKSKTSIKQL 170
>AT3G18550.2 | Symbols: BRC1, TCP18, ATTCP18 | TCP family
transcription factor | chr3:6383769-6385604 FORWARD
LENGTH=429
Length = 429
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%)
Query: 35 VRVSRASGGKDRHSKVMTSKGLRDRRVRLSVSTAIQFYDLQDRLGVDQPSKAVDWLIKAA 94
++ ++ DRHSK+ T+KG RDRR+RLS+ A + + LQD LG D+ SK V+WL+ A
Sbjct: 140 MKKAKKPSRTDRHSKIKTAKGTRDRRMRLSLDVAKELFGLQDMLGFDKASKTVEWLLTQA 199
Query: 95 EDAISEL 101
+ I ++
Sbjct: 200 KPEIIKI 206
>AT3G18550.1 | Symbols: BRC1, TCP18, ATTCP18 | TCP family
transcription factor | chr3:6383769-6385604 FORWARD
LENGTH=433
Length = 433
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%)
Query: 35 VRVSRASGGKDRHSKVMTSKGLRDRRVRLSVSTAIQFYDLQDRLGVDQPSKAVDWLIKAA 94
++ ++ DRHSK+ T+KG RDRR+RLS+ A + + LQD LG D+ SK V+WL+ A
Sbjct: 140 MKKAKKPSRTDRHSKIKTAKGTRDRRMRLSLDVAKELFGLQDMLGFDKASKTVEWLLTQA 199
Query: 95 EDAISEL 101
+ I ++
Sbjct: 200 KPEIIKI 206