Miyakogusa Predicted Gene

Lj6g3v1946300.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1946300.1 Non Chatacterized Hit- tr|Q6N6P4|Q6N6P4_RHOPA
Putative uncharacterized protein (Precursor)
OS=Rhodop,32.18,8e-19,seg,NULL; DUF1365,Protein of unknown function
DUF1365,CUFF.60246.1
         (316 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G30130.2 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   360   1e-99
AT1G30130.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   360   1e-99

>AT1G30130.2 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: endomembrane
           system; EXPRESSED IN: 23 plant structures; EXPRESSED
           DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
           Protein of unknown function DUF1365
           (InterPro:IPR010775); Has 35333 Blast hits to 34131
           proteins in 2444 species: Archae - 798; Bacteria -
           22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
           - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
           chr1:10587666-10589222 FORWARD LENGTH=311
          Length = 311

 Score =  360 bits (923), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 175/296 (59%), Positives = 212/296 (71%), Gaps = 13/296 (4%)

Query: 25  PFQALLRRLGTSRAASSSTNGGAEPISLYEGTVWHQRRHPVIHSFKYQVRYALIDLDRES 84
           PF+ LL RL  SRAA          +S YEGTVWH R  PV HSF+Y VRYAL DLD+  
Sbjct: 25  PFRFLLHRLLPSRAAVDPN------VSFYEGTVWHDRLRPVRHSFRYSVRYALFDLDKAI 78

Query: 85  HAPPGHISSDEARQLTDTDGPILLLTIPPSVGYEQNPLSVYYCYDVEGSSTRLKKCIAEV 144
           + PP H S+DEAR+++ T GPI LLTIPPSVGYEQNPLS+YYCYD+EGSS RL KCIA+V
Sbjct: 79  NTPPDHFSADEARRVSRTTGPIFLLTIPPSVGYEQNPLSLYYCYDLEGSSKRLSKCIAQV 138

Query: 145 TNTPWGERVSFIFNPHSDLVAKALHVSPFMDMLGSWNIKANDPGENLSISISVHHPEHGN 204
           TNTPWGERV+F+F+P SDLVAK+L VSPFMDMLG+W I+AN+PG++LS+SI+  HP  GN
Sbjct: 139 TNTPWGERVTFVFDPESDLVAKSLQVSPFMDMLGNWKIRANEPGDDLSVSIASQHPHFGN 198

Query: 205 YFTXXXXXXXXXXXXEPDHAVFFWLMPHKVAVWIYWHAIKLWWKNVRFVQHPRYATPTYK 264
           YF+              D AVFFWLMPHKVA+WIYWHA++LWWK+V F+QHPRY+ P+Y+
Sbjct: 199 YFSATLKAKRIPLSRVSDPAVFFWLMPHKVAIWIYWHALQLWWKSVPFIQHPRYSNPSYR 258

Query: 265 EEALIRDKKLQCCGF----SDDTRHLQEGGSDQVCLAEVSPRNRRFKWTDAEWPWS 316
           EEA  RD++L+C G     SD T    +G     C +       RF W DA WPWS
Sbjct: 259 EEAAKRDQELRCPGLDGSDSDKTNKF-DGLKGDGCSSSFG--GCRFAWRDANWPWS 311


>AT1G30130.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: endomembrane
           system; EXPRESSED IN: 23 plant structures; EXPRESSED
           DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
           Protein of unknown function DUF1365
           (InterPro:IPR010775); Has 1789 Blast hits to 1789
           proteins in 449 species: Archae - 0; Bacteria - 824;
           Metazoa - 0; Fungi - 6; Plants - 39; Viruses - 0; Other
           Eukaryotes - 920 (source: NCBI BLink). |
           chr1:10587666-10589222 FORWARD LENGTH=311
          Length = 311

 Score =  360 bits (923), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 175/296 (59%), Positives = 212/296 (71%), Gaps = 13/296 (4%)

Query: 25  PFQALLRRLGTSRAASSSTNGGAEPISLYEGTVWHQRRHPVIHSFKYQVRYALIDLDRES 84
           PF+ LL RL  SRAA          +S YEGTVWH R  PV HSF+Y VRYAL DLD+  
Sbjct: 25  PFRFLLHRLLPSRAAVDPN------VSFYEGTVWHDRLRPVRHSFRYSVRYALFDLDKAI 78

Query: 85  HAPPGHISSDEARQLTDTDGPILLLTIPPSVGYEQNPLSVYYCYDVEGSSTRLKKCIAEV 144
           + PP H S+DEAR+++ T GPI LLTIPPSVGYEQNPLS+YYCYD+EGSS RL KCIA+V
Sbjct: 79  NTPPDHFSADEARRVSRTTGPIFLLTIPPSVGYEQNPLSLYYCYDLEGSSKRLSKCIAQV 138

Query: 145 TNTPWGERVSFIFNPHSDLVAKALHVSPFMDMLGSWNIKANDPGENLSISISVHHPEHGN 204
           TNTPWGERV+F+F+P SDLVAK+L VSPFMDMLG+W I+AN+PG++LS+SI+  HP  GN
Sbjct: 139 TNTPWGERVTFVFDPESDLVAKSLQVSPFMDMLGNWKIRANEPGDDLSVSIASQHPHFGN 198

Query: 205 YFTXXXXXXXXXXXXEPDHAVFFWLMPHKVAVWIYWHAIKLWWKNVRFVQHPRYATPTYK 264
           YF+              D AVFFWLMPHKVA+WIYWHA++LWWK+V F+QHPRY+ P+Y+
Sbjct: 199 YFSATLKAKRIPLSRVSDPAVFFWLMPHKVAIWIYWHALQLWWKSVPFIQHPRYSNPSYR 258

Query: 265 EEALIRDKKLQCCGF----SDDTRHLQEGGSDQVCLAEVSPRNRRFKWTDAEWPWS 316
           EEA  RD++L+C G     SD T    +G     C +       RF W DA WPWS
Sbjct: 259 EEAAKRDQELRCPGLDGSDSDKTNKF-DGLKGDGCSSSFG--GCRFAWRDANWPWS 311