Miyakogusa Predicted Gene

Lj6g3v1946290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1946290.1 Non Chatacterized Hit- tr|I1KRU1|I1KRU1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,86.45,0,SUBFAMILY NOT
NAMED,NULL; DEHYDROGENASE RELATED,NULL; seg,NULL; Thiamin
diphosphate-binding fold (TH,CUFF.60241.1
         (399 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G34590.1 | Symbols:  | Transketolase family protein | chr2:14...   619   e-177
AT1G30120.1 | Symbols: PDH-E1 BETA | pyruvate dehydrogenase E1 b...   612   e-175
AT5G50850.1 | Symbols: MAB1 | Transketolase family protein | chr...   240   1e-63
AT1G55510.1 | Symbols: BCDH BETA1 | branched-chain alpha-keto ac...   190   2e-48
AT3G13450.1 | Symbols: DIN4 | Transketolase family protein | chr...   188   5e-48

>AT2G34590.1 | Symbols:  | Transketolase family protein |
           chr2:14568956-14570844 REVERSE LENGTH=406
          Length = 406

 Score =  619 bits (1596), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 315/407 (77%), Positives = 329/407 (80%), Gaps = 9/407 (2%)

Query: 1   MATLFQGVGAATAFSA-----SNKLHLPSRGSLSESKGSIFVVRSDAWMNNLLNLEARQP 55
           M+ + QG GAATA S      SNKL  PSR SLS       V  SD+      +L AR+ 
Sbjct: 1   MSAILQGAGAATALSPFNSIDSNKLVAPSRSSLSVRSKRYIVAGSDSKSFGS-SLVARRS 59

Query: 56  QRLITSAVATKAD---SSASTKTGHXXXXXXXXXXXXXXXXXRDPRVCVMGEDVGDYGGS 112
           + LI +AV TKAD   SS S+K GH                 RDP VCVMGEDVG YGGS
Sbjct: 60  EPLIPNAVTTKADTAASSTSSKPGHELLLFEALQEGLEEEMDRDPHVCVMGEDVGHYGGS 119

Query: 113 YKVTKGLAPKFGDLRVLDTPIAENAFTGMGIGAAMTGLRPIIEGMNMGFLLLAFNQISNN 172
           YKVTKGLA KFGDLRVLDTPI ENAFTGMGIGAAMTGLRP+IEGMNMGFLLLAFNQISNN
Sbjct: 120 YKVTKGLADKFGDLRVLDTPICENAFTGMGIGAAMTGLRPVIEGMNMGFLLLAFNQISNN 179

Query: 173 CGMLHYTSGGQFKXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGL 232
           CGMLHYTSGGQF              QLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGL
Sbjct: 180 CGMLHYTSGGQFTIPVVIRGPGGVGRQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGL 239

Query: 233 MKAAIRSENPVILFEHVLLYNLKERIPDEEYVLSLEEAEMVRPGEHITILTYSRMRYHVM 292
           MKAAIRSENPVILFEHVLLYNLKE IPDEEY+ +LEEAEMVRPGEHITILTYSRMRYHVM
Sbjct: 240 MKAAIRSENPVILFEHVLLYNLKESIPDEEYICNLEEAEMVRPGEHITILTYSRMRYHVM 299

Query: 293 QAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNSVKKTHRVLIVEECMRTGGIGASLTAAIT 352
           QAAKTLVNKGYDPEVIDIRSLKPFDL+TIGNSVKKTHRVLIVEECMRTGGIGASLTAAI 
Sbjct: 300 QAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSVKKTHRVLIVEECMRTGGIGASLTAAIN 359

Query: 353 ENFNDYLDAPVVCLSSQDVPTPYTGPLEEWTVVQPAQIVTAVEQLCQ 399
           ENF+DYLDAPV+CLSSQDVPTPY G LEEWTVVQPAQIVTAVEQLCQ
Sbjct: 360 ENFHDYLDAPVMCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLCQ 406


>AT1G30120.1 | Symbols: PDH-E1 BETA | pyruvate dehydrogenase E1 beta
           | chr1:10584350-10586477 REVERSE LENGTH=406
          Length = 406

 Score =  612 bits (1577), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 314/408 (76%), Positives = 331/408 (81%), Gaps = 11/408 (2%)

Query: 1   MATLFQGVGAATA----FSA--SNKLHL-PSRGSLSESKGSIFVVRSDAWMNNL-LNLEA 52
           M+++  G GAAT     F++  S KL + PSR +LS       V  SDA   +    L  
Sbjct: 1   MSSIIHGAGAATTTLSTFNSVDSKKLFVAPSRTNLSVRSQRYIVAGSDASKKSFGSGLRV 60

Query: 53  RQPQRLITSAVATK-ADSSASTKTGHXXXXXXXXXXXXXXXXXRDPRVCVMGEDVGDYGG 111
           R  Q+LI +AVATK AD+SAST  GH                 RDP VCVMGEDVG YGG
Sbjct: 61  RHSQKLIPNAVATKEADTSAST--GHELLLFEALQEGLEEEMDRDPHVCVMGEDVGHYGG 118

Query: 112 SYKVTKGLAPKFGDLRVLDTPIAENAFTGMGIGAAMTGLRPIIEGMNMGFLLLAFNQISN 171
           SYKVTKGLA KFGDLRVLDTPI ENAFTGMGIGAAMTGLRP+IEGMNMGFLLLAFNQISN
Sbjct: 119 SYKVTKGLADKFGDLRVLDTPICENAFTGMGIGAAMTGLRPVIEGMNMGFLLLAFNQISN 178

Query: 172 NCGMLHYTSGGQFKXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKG 231
           NCGMLHYTSGGQF              QLGAEHSQRLESYFQSIPGIQMVACSTPYNAKG
Sbjct: 179 NCGMLHYTSGGQFTIPVVIRGPGGVGRQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKG 238

Query: 232 LMKAAIRSENPVILFEHVLLYNLKERIPDEEYVLSLEEAEMVRPGEHITILTYSRMRYHV 291
           LMKAAIRSENPVILFEHVLLYNLKE+IPDE+YV +LEEAEMVRPGEHITILTYSRMRYHV
Sbjct: 239 LMKAAIRSENPVILFEHVLLYNLKEKIPDEDYVCNLEEAEMVRPGEHITILTYSRMRYHV 298

Query: 292 MQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNSVKKTHRVLIVEECMRTGGIGASLTAAI 351
           MQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNSVKKTHRVLIVEECMRTGGIGASLTAAI
Sbjct: 299 MQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNSVKKTHRVLIVEECMRTGGIGASLTAAI 358

Query: 352 TENFNDYLDAPVVCLSSQDVPTPYTGPLEEWTVVQPAQIVTAVEQLCQ 399
            ENF+DYLDAPV+CLSSQDVPTPY G LEEWTVVQPAQIVTAVEQLCQ
Sbjct: 359 NENFHDYLDAPVMCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLCQ 406


>AT5G50850.1 | Symbols: MAB1 | Transketolase family protein |
           chr5:20689671-20692976 FORWARD LENGTH=363
          Length = 363

 Score =  240 bits (613), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 123/307 (40%), Positives = 185/307 (60%), Gaps = 4/307 (1%)

Query: 96  DPRVCVMGEDVGDYGGSYKVTKGLAPKFGDLRVLDTPIAENAFTGMGIGAAMTGLRPIIE 155
           DP+V VMGE+VG Y G+YK+TKGL  K+G  RV DTPI E  FTG+G+GAA  GL+P++E
Sbjct: 53  DPKVFVMGEEVGQYQGAYKITKGLLEKYGPERVYDTPITEAGFTGIGVGAAYAGLKPVVE 112

Query: 156 GMNMGFLLLAFNQISNNCGMLHYTSGGQFKXXXXXXXXXXXXXQLGAEHSQRLESYFQSI 215
            M   F + A + I N+    +Y S GQ                +GA+HSQ   +++ S+
Sbjct: 113 FMTFNFSMQAIDHIINSAAKSNYMSAGQINVPIVFRGPNGAAAGVGAQHSQCYAAWYASV 172

Query: 216 PGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYN----LKERIPDEEYVLSLEEAE 271
           PG++++A  +  +A+GL+KAAIR  +PV+  E+ LLY     + E   D  + L + +A+
Sbjct: 173 PGLKVLAPYSAEDARGLLKAAIRDPDPVVFLENELLYGESFPISEEALDSSFCLPIGKAK 232

Query: 272 MVRPGEHITILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNSVKKTHRV 331
           + R G+ +TI+T+S+M    ++AA+ L  +G   EVI++RS++P D  TI  SV+KT R+
Sbjct: 233 IEREGKDVTIVTFSKMVGFALKAAEKLAEEGISAEVINLRSIRPLDRATINASVRKTSRL 292

Query: 332 LIVEECMRTGGIGASLTAAITENFNDYLDAPVVCLSSQDVPTPYTGPLEEWTVVQPAQIV 391
           + VEE     G+ A + A++ E    YLDAPV  ++  DVP PY   LE   + Q   IV
Sbjct: 293 VTVEEGFPQHGVCAEICASVVEESFSYLDAPVERIAGADVPMPYAANLERLALPQIEDIV 352

Query: 392 TAVEQLC 398
            A ++ C
Sbjct: 353 RASKRAC 359


>AT1G55510.1 | Symbols: BCDH BETA1 | branched-chain alpha-keto acid
           decarboxylase E1 beta subunit | chr1:20723482-20725505
           FORWARD LENGTH=352
          Length = 352

 Score =  190 bits (482), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/305 (37%), Positives = 157/305 (51%), Gaps = 3/305 (0%)

Query: 72  STKTGHXXXXXXXXXXXXXXXXXRDPRVCVMGEDVGDYGGSYKVTKGLAPKFGDLRVLDT 131
           ST+TG                   DPR  V GEDVG +GG ++ T GLA +FG  RV +T
Sbjct: 25  STETGKPLNLYSAINQALHIALDTDPRSYVFGEDVG-FGGVFRCTTGLAERFGKNRVFNT 83

Query: 132 PIAENAFTGMGIGAAMTGLRPIIEGMNMGFLLLAFNQISNNCGMLHYTSGGQFKXXXXXX 191
           P+ E    G GIG A  G R I+E     ++  AF+QI N      Y SG QF       
Sbjct: 84  PLCEQGIVGFGIGLAAMGNRAIVEIQFADYIYPAFDQIVNEAAKFRYRSGNQFNCGGLTI 143

Query: 192 XXXXXXXQLGAE-HSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVL 250
                    G   HSQ  E++F  +PGI++V   +P  AKGL+ + IR  NPV+ FE   
Sbjct: 144 RAPYGAVGHGGHYHSQSPEAFFCHVPGIKVVIPRSPREAKGLLLSCIRDPNPVVFFEPKW 203

Query: 251 LYNLK-ERIPDEEYVLSLEEAEMVRPGEHITILTYSRMRYHVMQAAKTLVNKGYDPEVID 309
           LY    E +P+ +Y++ L EAE++R G  IT++ +      + QA      +G   E+ID
Sbjct: 204 LYRQAVEEVPEHDYMIPLSEAEVIREGNDITLVGWGAQLTVMEQACLDAEKEGISCELID 263

Query: 310 IRSLKPFDLHTIGNSVKKTHRVLIVEECMRTGGIGASLTAAITENFNDYLDAPVVCLSSQ 369
           +++L P+D  T+  SVKKT R+LI  E   TGG GA ++A I E     L+APV  +   
Sbjct: 264 LKTLLPWDKETVEASVKKTGRLLISHEAPVTGGFGAEISATILERCFLKLEAPVSRVCGL 323

Query: 370 DVPTP 374
           D P P
Sbjct: 324 DTPFP 328


>AT3G13450.1 | Symbols: DIN4 | Transketolase family protein |
           chr3:4382340-4384295 REVERSE LENGTH=358
          Length = 358

 Score =  188 bits (478), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 109/281 (38%), Positives = 152/281 (54%), Gaps = 3/281 (1%)

Query: 96  DPRVCVMGEDVGDYGGSYKVTKGLAPKFGDLRVLDTPIAENAFTGMGIGAAMTGLRPIIE 155
           DPR  V GEDVG +GG ++ T GLA +FG  RV +TP+ E    G GIG A  G R I E
Sbjct: 55  DPRSYVFGEDVG-FGGVFRCTTGLAERFGKSRVFNTPLCEQGIVGFGIGLAAMGNRVIAE 113

Query: 156 GMNMGFLLLAFNQISNNCGMLHYTSGGQFKXXXXXXXXXXXXXQLGAE-HSQRLESYFQS 214
                ++  AF+QI N      Y SG QF                G   HSQ  E++F  
Sbjct: 114 IQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTIRAPYGAVGHGGHYHSQSPEAFFCH 173

Query: 215 IPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLK-ERIPDEEYVLSLEEAEMV 273
           +PGI++V   +P  AKGL+ ++IR  NPV+ FE   LY    E +P+++Y++ L EAE++
Sbjct: 174 VPGIKVVIPRSPREAKGLLLSSIRDPNPVVFFEPKWLYRQAVEDVPEDDYMIPLSEAEVM 233

Query: 274 RPGEHITILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNSVKKTHRVLI 333
           R G  IT++ +      + QA     N+G   E+ID+++L P+D   +  SV+KT R+LI
Sbjct: 234 REGSDITLVGWGAQLTIMEQACLDAENEGISCELIDLKTLIPWDKEIVETSVRKTGRLLI 293

Query: 334 VEECMRTGGIGASLTAAITENFNDYLDAPVVCLSSQDVPTP 374
             E   TGG GA + A I E     L+APV  +   D P P
Sbjct: 294 SHEAPVTGGFGAEIAATIVERCFLRLEAPVSRVCGLDTPFP 334