Miyakogusa Predicted Gene
- Lj6g3v1946230.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1946230.1 Non Chatacterized Hit- tr|I1MF26|I1MF26_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,92.21,0,no
description,NULL; no description,Winged helix-turn-helix transcription
repressor DNA-binding; CUL,CUFF.60255.1
(768 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G46210.1 | Symbols: CUL4, ATCUL4 | cullin4 | chr5:18731569-18... 1160 0.0
AT1G69670.1 | Symbols: CUL3B, ATCUL3B | cullin 3B | chr1:2620216... 465 e-131
AT1G26830.1 | Symbols: CUL3A, ATCUL3A, ATCUL3, CUL3 | cullin 3 |... 462 e-130
AT4G02570.4 | Symbols: CUL1 | cullin 1 | chr4:1129315-1133435 FO... 327 2e-89
AT4G02570.3 | Symbols: ATCUL1, CUL1, AXR6 | cullin 1 | chr4:1129... 327 2e-89
AT4G02570.2 | Symbols: ATCUL1, CUL1, AXR6 | cullin 1 | chr4:1129... 327 2e-89
AT4G02570.1 | Symbols: ATCUL1, CUL1, AXR6 | cullin 1 | chr4:1129... 327 2e-89
AT1G02980.1 | Symbols: CUL2, ATCUL2 | cullin 2 | chr1:677869-681... 287 2e-77
AT1G43140.1 | Symbols: | Cullin family protein | chr1:16232785-... 263 5e-70
AT4G12100.1 | Symbols: | Cullin family protein | chr4:7246453-7... 186 6e-47
AT3G46910.1 | Symbols: | Cullin family protein | chr3:17278636-... 134 3e-31
AT1G59790.1 | Symbols: | Cullin family protein | chr1:22001504-... 82 1e-15
AT1G59800.1 | Symbols: | Cullin family protein | chr1:22004964-... 66 1e-10
AT2G04660.1 | Symbols: APC2 | anaphase-promoting complex/cycloso... 64 3e-10
>AT5G46210.1 | Symbols: CUL4, ATCUL4 | cullin4 |
chr5:18731569-18736653 REVERSE LENGTH=792
Length = 792
Score = 1160 bits (3001), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 578/710 (81%), Positives = 617/710 (86%)
Query: 59 AANLARKKATXXXXXXXXXXXXXXXXXTLPTNFEEDTWAKLKSAICAIFLKQPDSCDLEK 118
AANL+RKKAT TLPTNFEE+TW KL+SAI AIFLK+ S DLE
Sbjct: 59 AANLSRKKATLPQPTKKFVIKLNKAKPTLPTNFEENTWEKLQSAIRAIFLKKKISFDLES 118
Query: 119 LYQAVSDLCLYKMGGNLYQRIEKECEVHISAALQSLVGQSPDLVVFLSLVERCWQDLCDQ 178
LYQAV +LCL+K+ G LY +IEKECE HISAALQSLVGQ+ DL VFLS VE+CWQD CDQ
Sbjct: 119 LYQAVDNLCLHKLDGKLYDQIEKECEEHISAALQSLVGQNTDLTVFLSRVEKCWQDFCDQ 178
Query: 179 MLMIRGIALYLDRTYVKQTANVRSLWDMGLQLFRKHLSLSPEVQHKTVTGLLRMIESERL 238
MLMIR IAL LDR YV Q NVRSLW+MGLQLFRKHLSL+PEV+ +TV GLL MIE ERL
Sbjct: 179 MLMIRSIALTLDRKYVIQNPNVRSLWEMGLQLFRKHLSLAPEVEQRTVKGLLSMIEKERL 238
Query: 239 GEAVDRTLLNHLLKMFTALGIYAESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVET 298
EAV+RTLL+HLLKMFTALGIY ESFEKPFLE TSEFYAAEGMKYMQQSDVP+YLKHVE
Sbjct: 239 AEAVNRTLLSHLLKMFTALGIYMESFEKPFLEGTSEFYAAEGMKYMQQSDVPEYLKHVEG 298
Query: 299 RLQEEHDRCLIYLDASTRKPLIATAEKQLLERHIPAILDKGFSMLMDGNRIEDLQRIYSL 358
RL EE++RC++Y+DA TRKPLI T E+QLLERHI +L+KGF+ LMDG R EDLQR+ +L
Sbjct: 299 RLHEENERCILYIDAVTRKPLITTVERQLLERHILVVLEKGFTTLMDGRRTEDLQRMQTL 358
Query: 359 FSRVNALESLRQAISSYIRKTGQGXXXXXXXXXXXXSSLLEFKASLDTIWEESFFKNEAF 418
FSRVNALESLRQA+SSY+RKTGQ SLL+FKASLD IWEESF+KNE+F
Sbjct: 359 FSRVNALESLRQALSSYVRKTGQKIVMDEEKDKDMVQSLLDFKASLDIIWEESFYKNESF 418
Query: 419 CNTIKDAFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGK 478
NTIKD+FEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELE L+KVLVLFRFIQGK
Sbjct: 419 GNTIKDSFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELESVLEKVLVLFRFIQGK 478
Query: 479 DVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINE 538
DVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINE
Sbjct: 479 DVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINE 538
Query: 539 SFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGR 598
SFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDV+LPHELNVYQDIFKEFYLSKYSGR
Sbjct: 539 SFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVKLPHELNVYQDIFKEFYLSKYSGR 598
Query: 599 RLMWQNSLGHCVLKADFPKGKKELAVSLFQTVVLMLFNDAEKLSFQDIKDSTSIEDKELR 658
RLMWQNSLGHCVLKADF KGKKELAVSLFQ VVLMLFNDA KLSF+DIKDSTSIEDKELR
Sbjct: 599 RLMWQNSLGHCVLKADFSKGKKELAVSLFQAVVLMLFNDAMKLSFEDIKDSTSIEDKELR 658
Query: 659 RTLQSLACGKVRVLQKTPKGRXXXXXXXXXXXXXXTAPLYRIKVNAIQLKETVEENTSTT 718
RTLQSLACGKVRVLQK PKGR APLYRIKVNAIQ+KETVEENTSTT
Sbjct: 659 RTLQSLACGKVRVLQKNPKGRDVEDGDEFEFNDEFAAPLYRIKVNAIQMKETVEENTSTT 718
Query: 719 ERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKR 768
ERVFQDRQYQ+DAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKR
Sbjct: 719 ERVFQDRQYQIDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKR 768
>AT1G69670.1 | Symbols: CUL3B, ATCUL3B | cullin 3B |
chr1:26202169-26204442 REVERSE LENGTH=732
Length = 732
Score = 465 bits (1197), Expect = e-131, Method: Compositional matrix adjust.
Identities = 262/692 (37%), Positives = 409/692 (59%), Gaps = 21/692 (3%)
Query: 91 FEEDTWAKLKSAICAIFLKQPDSCDLEKLYQAVSDLCLYKMGGNLYQRIEKECEVHISAA 150
+ + TW L+ AI I+ E+LY+ ++ L+K G LY + H+
Sbjct: 24 YADKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKYGDKLYTGLVTTMTFHLKEI 83
Query: 151 LQSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTANVRSLWDMGLQL 210
+S+ + FL L+ R W D + MIR I +Y+DRTYV T + ++GL L
Sbjct: 84 CKSI--EEAQGGAFLELLNRKWNDHNKALQMIRDILMYMDRTYVSTTKKTH-VHELGLHL 140
Query: 211 FRKHLSLSPEVQHKTVTGLLRMIESERLGEAVDRTLLNHLLKMFTALG--IYAESFEKPF 268
+R ++ S ++Q + + LL ++ ER GE +DR L+ +++KMF LG +Y + FEKPF
Sbjct: 141 WRDNVVYSSKIQTRLLNTLLDLVHKERTGEVIDRVLMRNVIKMFMDLGESVYQDDFEKPF 200
Query: 269 LECTSEFYAAEGMKYMQQSDVPDYLKHVETRLQEEHDRCLIYLDASTRKPLIATAEKQLL 328
LE ++EFY E M++++ D +YLK E L EE +R + YLDA + + + E++++
Sbjct: 201 LEASAEFYKVESMEFIESCDCGEYLKKAEKPLVEEVERVVNYLDAKSEAKITSVVEREMI 260
Query: 329 ERHIPAIL---DKGFSMLMDGNRIEDLQRIYSLFSRV-NALESLRQAISSYIRKTGQGXX 384
H+ ++ + G ++ ++ ED+ R+YSLF RV N L ++R ++ ++R+ G+
Sbjct: 261 ANHVQRLVHMENSGLVNMLLNDKYEDMGRMYSLFRRVANGLVTVRDVMTLHLREMGKQLV 320
Query: 385 X---XXXXXXXXXSSLLEFKASLDTIWEESFFKNEAFCNTIKDAFEHLINLRQNRPAELI 441
LL+ + D I +F ++ F N + +FE+ +NL P E I
Sbjct: 321 TDPEKSKDPVEFVQRLLDERDKYDRIINMAFNNDKTFQNALNSSFEYFVNLNTRSP-EFI 379
Query: 442 AKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASI 501
+ F+D+KLR G KG EE+++ LDKV++LFR++Q KDVFE +YK+ LAKRLL GK+ S
Sbjct: 380 SLFVDDKLRKGLKGVGEEDVDLILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSD 439
Query: 502 DAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVL 561
DAE+++I KLKTECG QFT+KLEGMF D++ S + F S +L G + V VL
Sbjct: 440 DAERNLIVKLKTECGYQFTSKLEGMFTDMKTSHDTLLGFYNS---HPELSEGPTLVVQVL 496
Query: 562 TTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKADFPKGKK- 620
TTG WPT P + LP E++V + F+ +YL ++GRRL WQ ++G +KA F KG+K
Sbjct: 497 TTGSWPTQPTIQCNLPAEVSVLCEKFRSYYLGTHTGRRLSWQTNMGTADIKAVFGKGQKH 556
Query: 621 ELAVSLFQTVVLMLFNDAEKLSFQDIKDSTSIEDKELRRTLQSLACGKVR-VLQKTPKGR 679
EL VS FQ VLMLFN++++LS+++I+ +T I +L+R LQS+AC K + VL+K P +
Sbjct: 557 ELNVSTFQMCVLMLFNNSDRLSYKEIEQATEIPTPDLKRCLQSMACVKGKNVLRKEPMSK 616
Query: 680 XXXXXXXXXXXXXXTAPLYRIKVN-AIQLKETVEENTSTTERVFQDRQYQVDAAIVRIMK 738
+ Y++K+ + KET E T +RV +DR+ Q++AAIVRIMK
Sbjct: 617 EIAEEDWFVVNDRFASKFYKVKIGTVVAQKETEPEKQETRQRVEEDRKPQIEAAIVRIMK 676
Query: 739 TRKVLSHTLLITELFQQL--KFPIKPADLKKR 768
+R+VL H +I E+ +QL +F P ++KKR
Sbjct: 677 SRRVLDHNNIIAEVTKQLQTRFLANPTEIKKR 708
>AT1G26830.1 | Symbols: CUL3A, ATCUL3A, ATCUL3, CUL3 | cullin 3 |
chr1:9296063-9298374 FORWARD LENGTH=732
Length = 732
Score = 462 bits (1188), Expect = e-130, Method: Compositional matrix adjust.
Identities = 265/695 (38%), Positives = 413/695 (59%), Gaps = 27/695 (3%)
Query: 91 FEEDTWAKLKSAICAIFLKQPDSCDLEKLYQAVSDLCLYKMGGNLYQRIEKECEVHI--- 147
+ + TW L+ AI I+ + E+LY+ ++ L+K G LY H+
Sbjct: 24 YADKTWQILERAIHQIYNQDASGLSFEELYRNAYNMVLHKFGEKLYTGFIATMTSHLKEK 83
Query: 148 SAALQSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTANVRSLWDMG 207
S +++ G S FL + + W + + MIR I +Y+DRTY++ T + MG
Sbjct: 84 SKLIEAAQGGS-----FLEELNKKWNEHNKALEMIRDILMYMDRTYIESTKKTH-VHPMG 137
Query: 208 LQLFRKHLSLSPEVQHKTVTGLLRMIESERLGEAVDRTLLNHLLKMFTALG--IYAESFE 265
L L+R ++ ++ + + LL +++ ER+GE +DR L+ +++KMF LG +Y E FE
Sbjct: 138 LNLWRDNVVHFTKIHTRLLNTLLDLVQKERIGEVIDRGLMRNVIKMFMDLGESVYQEDFE 197
Query: 266 KPFLECTSEFYAAEGMKYMQQSDVPDYLKHVETRLQEEHDRCLIYLDASTRKPLIATAEK 325
KPFL+ +SEFY E ++++ D DYLK E RL EE +R YLDA + + + + EK
Sbjct: 198 KPFLDASSEFYKVESQEFIESCDCGDYLKKSEKRLTEEIERVAHYLDAKSEEKITSVVEK 257
Query: 326 QLLERHIPAIL---DKGFSMLMDGNRIEDLQRIYSLFSRV-NALESLRQAISSYIRKTGQ 381
+++ H+ ++ + G ++ ++ EDL R+Y+LF RV N L ++R ++S++R+ G+
Sbjct: 258 EMIANHMQRLVHMENSGLVNMLLNDKYEDLGRMYNLFRRVTNGLVTVRDVMTSHLREMGK 317
Query: 382 GXXX---XXXXXXXXXSSLLEFKASLDTIWEESFFKNEAFCNTIKDAFEHLINLRQNRPA 438
LL+ + D I +F ++ F N + +FE+ INL P
Sbjct: 318 QLVTDPEKSKDPVEFVQRLLDERDKYDKIINTAFGNDKTFQNALNSSFEYFINLNARSP- 376
Query: 439 ELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKS 498
E I+ F+D+KLR G KG ++ ++E LDKV++LFR++Q KDVFE +YK+ LAKRLL GK+
Sbjct: 377 EFISLFVDDKLRKGLKGITDVDVEVILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKT 436
Query: 499 ASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSV 558
S DAE+S+I KLKTECG QFT+KLEGMF D++ S++ F S +L G + V
Sbjct: 437 VSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSEDTMRGFYGS---HPELSEGPTLIV 493
Query: 559 HVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKADFPKG 618
VLTTG WPT P + LP E++V + F+ +YL ++GRRL WQ ++G +KA F KG
Sbjct: 494 QVLTTGSWPTQPAVPCNLPAEVSVLCEKFRSYYLGTHTGRRLSWQTNMGTADIKAIFGKG 553
Query: 619 KK-ELAVSLFQTVVLMLFNDAEKLSFQDIKDSTSIEDKELRRTLQSLACGKVR-VLQKTP 676
+K EL VS FQ VLMLFN++++LS+++I+ +T I +L+R LQSLAC K + V++K P
Sbjct: 554 QKHELNVSTFQMCVLMLFNNSDRLSYKEIEQATEIPAADLKRCLQSLACVKGKNVIKKEP 613
Query: 677 KGRXXXXXXXXXXXXXXTAPLYRIKVN-AIQLKETVEENTSTTERVFQDRQYQVDAAIVR 735
+ T+ Y++K+ + KET E T +RV +DR+ Q++AAIVR
Sbjct: 614 MSKDIGEEDLFVVNDKFTSKFYKVKIGTVVAQKETEPEKQETRQRVEEDRKPQIEAAIVR 673
Query: 736 IMKTRKVLSHTLLITELFQQL--KFPIKPADLKKR 768
IMK+RK+L H +I E+ +QL +F P ++KKR
Sbjct: 674 IMKSRKILDHNNIIAEVTKQLQPRFLANPTEIKKR 708
>AT4G02570.4 | Symbols: CUL1 | cullin 1 | chr4:1129315-1133435
FORWARD LENGTH=738
Length = 738
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 221/713 (30%), Positives = 365/713 (51%), Gaps = 51/713 (7%)
Query: 93 EDTWAKLKSAICAI-----FLKQP--DSCDLEKLYQAVSDLCLYK----MGGNLYQRIEK 141
E W +++ I + L +P DS LY + ++C K LY + +
Sbjct: 9 EQGWDYMQTGITKLKRILEGLNEPAFDSEQYMMLYTTIYNMCTQKPPHDYSQQLYDKYRE 68
Query: 142 ECEVHISAALQSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIA---LYLDRTYVKQTA 198
E +I++ + + + D + L +R W + +M+R ++ YLDR ++ + +
Sbjct: 69 AFEEYINSTVLPALREKHDEFMLRELFKR-WSN---HKVMVRWLSRFFYYLDRYFIARRS 124
Query: 199 NVRSLWDMGLQLFRKHLSLSPEVQHKTVTGLLRMIESERLGEAVDRTLLNHLLKMFTALG 258
+ L ++GL FR + E+ K ++ +++ ER GE +DR LL ++L ++ +G
Sbjct: 125 -LPPLNEVGLTCFRD--LVYNELHSKVKQAVIALVDKEREGEQIDRALLKNVLDIYVEIG 181
Query: 259 I-----YAESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVETRLQEEHDRCLIYLDA 313
+ Y E FE L+ TS +Y+ + ++Q+ PDY+ E L++E +R YL +
Sbjct: 182 MGQMERYEEDFESFMLQDTSSYYSRKASSWIQEDSCPDYMLKSEECLKKERERVAHYLHS 241
Query: 314 STRKPLIATAEKQLLERHIPAILDK---GFSMLMDGNRIEDLQRIYSLFSRV-NALESLR 369
S+ L+ + +LL +L+K G L+ ++++DL R+Y L+ ++ LE +
Sbjct: 242 SSEPKLVEKVQHELLVVFASQLLEKEHSGCRALLRDDKVDDLSRMYRLYHKILRGLEPVA 301
Query: 370 QAISSYIRKTG-------------QGXXXXXXXXXXXXSSLLEFKASLDTIWEESFFKNE 416
++ G Q ++E E F +
Sbjct: 302 NIFKQHVTAEGNALVQQAEDTATNQVANTASVQEQVLIRKVIELHDKYMVYVTECFQNHT 361
Query: 417 AFCNTIKDAFEHLIN--LRQNRPAELIAKFLDEKLR-AGNKGTSEEELEGTLDKVLVLFR 473
F +K+AFE N + + AEL+A F D L+ G++ S+E +E TL+KV+ L
Sbjct: 362 LFHKALKEAFEIFCNKTVAGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVKLLA 421
Query: 474 FIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELS 533
+I KD+F FY+K LA+RLL +SA+ D E+S+++KLK +CG QFT+K+EGM D+ L+
Sbjct: 422 YISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLA 481
Query: 534 KEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLS 593
+E SF+ + GI+++V VLTTG+WP+Y D+ LP E+ ++FK FY +
Sbjct: 482 RENQNSFEDYLGSNPAANPGIDLTVTVLTTGFWPSYKSFDINLPSEMIKCVEVFKGFYET 541
Query: 594 KYSGRRLMWQNSLGHCVLKADFPKGKKELAVSLFQTVVLMLFNDAEKLSFQDIKDSTSIE 653
K R+L W SLG C + F + EL VS +Q VL+LFN +KLS+ +I ++
Sbjct: 542 KTKHRKLTWIYSLGTCHINGKFDQKAIELIVSTYQAAVLLLFNTTDKLSYTEILAQLNLS 601
Query: 654 DKELRRTLQSLACGKVRVLQKTPKGRXXXXXXXXXXXXXXTAPLYRIKVNAIQLKETVEE 713
++L R L SL+C K ++L K P + T + RIK+ V+E
Sbjct: 602 HEDLVRLLHSLSCAKYKILLKEPNTKTVSQNDAFEFNSKFTDRMRRIKIPL----PPVDE 657
Query: 714 NTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLK 766
E V +DR+Y +DAAIVRIMK+RKVL H L++E +QL KP D+K
Sbjct: 658 RKKVVEDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVSECVEQLSRMFKP-DIK 709
>AT4G02570.3 | Symbols: ATCUL1, CUL1, AXR6 | cullin 1 |
chr4:1129315-1133435 FORWARD LENGTH=738
Length = 738
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 221/713 (30%), Positives = 365/713 (51%), Gaps = 51/713 (7%)
Query: 93 EDTWAKLKSAICAI-----FLKQP--DSCDLEKLYQAVSDLCLYK----MGGNLYQRIEK 141
E W +++ I + L +P DS LY + ++C K LY + +
Sbjct: 9 EQGWDYMQTGITKLKRILEGLNEPAFDSEQYMMLYTTIYNMCTQKPPHDYSQQLYDKYRE 68
Query: 142 ECEVHISAALQSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIA---LYLDRTYVKQTA 198
E +I++ + + + D + L +R W + +M+R ++ YLDR ++ + +
Sbjct: 69 AFEEYINSTVLPALREKHDEFMLRELFKR-WSN---HKVMVRWLSRFFYYLDRYFIARRS 124
Query: 199 NVRSLWDMGLQLFRKHLSLSPEVQHKTVTGLLRMIESERLGEAVDRTLLNHLLKMFTALG 258
+ L ++GL FR + E+ K ++ +++ ER GE +DR LL ++L ++ +G
Sbjct: 125 -LPPLNEVGLTCFRD--LVYNELHSKVKQAVIALVDKEREGEQIDRALLKNVLDIYVEIG 181
Query: 259 I-----YAESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVETRLQEEHDRCLIYLDA 313
+ Y E FE L+ TS +Y+ + ++Q+ PDY+ E L++E +R YL +
Sbjct: 182 MGQMERYEEDFESFMLQDTSSYYSRKASSWIQEDSCPDYMLKSEECLKKERERVAHYLHS 241
Query: 314 STRKPLIATAEKQLLERHIPAILDK---GFSMLMDGNRIEDLQRIYSLFSRV-NALESLR 369
S+ L+ + +LL +L+K G L+ ++++DL R+Y L+ ++ LE +
Sbjct: 242 SSEPKLVEKVQHELLVVFASQLLEKEHSGCRALLRDDKVDDLSRMYRLYHKILRGLEPVA 301
Query: 370 QAISSYIRKTG-------------QGXXXXXXXXXXXXSSLLEFKASLDTIWEESFFKNE 416
++ G Q ++E E F +
Sbjct: 302 NIFKQHVTAEGNALVQQAEDTATNQVANTASVQEQVLIRKVIELHDKYMVYVTECFQNHT 361
Query: 417 AFCNTIKDAFEHLIN--LRQNRPAELIAKFLDEKLR-AGNKGTSEEELEGTLDKVLVLFR 473
F +K+AFE N + + AEL+A F D L+ G++ S+E +E TL+KV+ L
Sbjct: 362 LFHKALKEAFEIFCNKTVAGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVKLLA 421
Query: 474 FIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELS 533
+I KD+F FY+K LA+RLL +SA+ D E+S+++KLK +CG QFT+K+EGM D+ L+
Sbjct: 422 YISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLA 481
Query: 534 KEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLS 593
+E SF+ + GI+++V VLTTG+WP+Y D+ LP E+ ++FK FY +
Sbjct: 482 RENQNSFEDYLGSNPAANPGIDLTVTVLTTGFWPSYKSFDINLPSEMIKCVEVFKGFYET 541
Query: 594 KYSGRRLMWQNSLGHCVLKADFPKGKKELAVSLFQTVVLMLFNDAEKLSFQDIKDSTSIE 653
K R+L W SLG C + F + EL VS +Q VL+LFN +KLS+ +I ++
Sbjct: 542 KTKHRKLTWIYSLGTCHINGKFDQKAIELIVSTYQAAVLLLFNTTDKLSYTEILAQLNLS 601
Query: 654 DKELRRTLQSLACGKVRVLQKTPKGRXXXXXXXXXXXXXXTAPLYRIKVNAIQLKETVEE 713
++L R L SL+C K ++L K P + T + RIK+ V+E
Sbjct: 602 HEDLVRLLHSLSCAKYKILLKEPNTKTVSQNDAFEFNSKFTDRMRRIKIPL----PPVDE 657
Query: 714 NTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLK 766
E V +DR+Y +DAAIVRIMK+RKVL H L++E +QL KP D+K
Sbjct: 658 RKKVVEDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVSECVEQLSRMFKP-DIK 709
>AT4G02570.2 | Symbols: ATCUL1, CUL1, AXR6 | cullin 1 |
chr4:1129315-1133435 FORWARD LENGTH=738
Length = 738
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 221/713 (30%), Positives = 365/713 (51%), Gaps = 51/713 (7%)
Query: 93 EDTWAKLKSAICAI-----FLKQP--DSCDLEKLYQAVSDLCLYK----MGGNLYQRIEK 141
E W +++ I + L +P DS LY + ++C K LY + +
Sbjct: 9 EQGWDYMQTGITKLKRILEGLNEPAFDSEQYMMLYTTIYNMCTQKPPHDYSQQLYDKYRE 68
Query: 142 ECEVHISAALQSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIA---LYLDRTYVKQTA 198
E +I++ + + + D + L +R W + +M+R ++ YLDR ++ + +
Sbjct: 69 AFEEYINSTVLPALREKHDEFMLRELFKR-WSN---HKVMVRWLSRFFYYLDRYFIARRS 124
Query: 199 NVRSLWDMGLQLFRKHLSLSPEVQHKTVTGLLRMIESERLGEAVDRTLLNHLLKMFTALG 258
+ L ++GL FR + E+ K ++ +++ ER GE +DR LL ++L ++ +G
Sbjct: 125 -LPPLNEVGLTCFRD--LVYNELHSKVKQAVIALVDKEREGEQIDRALLKNVLDIYVEIG 181
Query: 259 I-----YAESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVETRLQEEHDRCLIYLDA 313
+ Y E FE L+ TS +Y+ + ++Q+ PDY+ E L++E +R YL +
Sbjct: 182 MGQMERYEEDFESFMLQDTSSYYSRKASSWIQEDSCPDYMLKSEECLKKERERVAHYLHS 241
Query: 314 STRKPLIATAEKQLLERHIPAILDK---GFSMLMDGNRIEDLQRIYSLFSRV-NALESLR 369
S+ L+ + +LL +L+K G L+ ++++DL R+Y L+ ++ LE +
Sbjct: 242 SSEPKLVEKVQHELLVVFASQLLEKEHSGCRALLRDDKVDDLSRMYRLYHKILRGLEPVA 301
Query: 370 QAISSYIRKTG-------------QGXXXXXXXXXXXXSSLLEFKASLDTIWEESFFKNE 416
++ G Q ++E E F +
Sbjct: 302 NIFKQHVTAEGNALVQQAEDTATNQVANTASVQEQVLIRKVIELHDKYMVYVTECFQNHT 361
Query: 417 AFCNTIKDAFEHLIN--LRQNRPAELIAKFLDEKLR-AGNKGTSEEELEGTLDKVLVLFR 473
F +K+AFE N + + AEL+A F D L+ G++ S+E +E TL+KV+ L
Sbjct: 362 LFHKALKEAFEIFCNKTVAGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVKLLA 421
Query: 474 FIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELS 533
+I KD+F FY+K LA+RLL +SA+ D E+S+++KLK +CG QFT+K+EGM D+ L+
Sbjct: 422 YISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLA 481
Query: 534 KEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLS 593
+E SF+ + GI+++V VLTTG+WP+Y D+ LP E+ ++FK FY +
Sbjct: 482 RENQNSFEDYLGSNPAANPGIDLTVTVLTTGFWPSYKSFDINLPSEMIKCVEVFKGFYET 541
Query: 594 KYSGRRLMWQNSLGHCVLKADFPKGKKELAVSLFQTVVLMLFNDAEKLSFQDIKDSTSIE 653
K R+L W SLG C + F + EL VS +Q VL+LFN +KLS+ +I ++
Sbjct: 542 KTKHRKLTWIYSLGTCHINGKFDQKAIELIVSTYQAAVLLLFNTTDKLSYTEILAQLNLS 601
Query: 654 DKELRRTLQSLACGKVRVLQKTPKGRXXXXXXXXXXXXXXTAPLYRIKVNAIQLKETVEE 713
++L R L SL+C K ++L K P + T + RIK+ V+E
Sbjct: 602 HEDLVRLLHSLSCAKYKILLKEPNTKTVSQNDAFEFNSKFTDRMRRIKIPL----PPVDE 657
Query: 714 NTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLK 766
E V +DR+Y +DAAIVRIMK+RKVL H L++E +QL KP D+K
Sbjct: 658 RKKVVEDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVSECVEQLSRMFKP-DIK 709
>AT4G02570.1 | Symbols: ATCUL1, CUL1, AXR6 | cullin 1 |
chr4:1129315-1133435 FORWARD LENGTH=738
Length = 738
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 221/713 (30%), Positives = 365/713 (51%), Gaps = 51/713 (7%)
Query: 93 EDTWAKLKSAICAI-----FLKQP--DSCDLEKLYQAVSDLCLYK----MGGNLYQRIEK 141
E W +++ I + L +P DS LY + ++C K LY + +
Sbjct: 9 EQGWDYMQTGITKLKRILEGLNEPAFDSEQYMMLYTTIYNMCTQKPPHDYSQQLYDKYRE 68
Query: 142 ECEVHISAALQSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIA---LYLDRTYVKQTA 198
E +I++ + + + D + L +R W + +M+R ++ YLDR ++ + +
Sbjct: 69 AFEEYINSTVLPALREKHDEFMLRELFKR-WSN---HKVMVRWLSRFFYYLDRYFIARRS 124
Query: 199 NVRSLWDMGLQLFRKHLSLSPEVQHKTVTGLLRMIESERLGEAVDRTLLNHLLKMFTALG 258
+ L ++GL FR + E+ K ++ +++ ER GE +DR LL ++L ++ +G
Sbjct: 125 -LPPLNEVGLTCFRD--LVYNELHSKVKQAVIALVDKEREGEQIDRALLKNVLDIYVEIG 181
Query: 259 I-----YAESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVETRLQEEHDRCLIYLDA 313
+ Y E FE L+ TS +Y+ + ++Q+ PDY+ E L++E +R YL +
Sbjct: 182 MGQMERYEEDFESFMLQDTSSYYSRKASSWIQEDSCPDYMLKSEECLKKERERVAHYLHS 241
Query: 314 STRKPLIATAEKQLLERHIPAILDK---GFSMLMDGNRIEDLQRIYSLFSRV-NALESLR 369
S+ L+ + +LL +L+K G L+ ++++DL R+Y L+ ++ LE +
Sbjct: 242 SSEPKLVEKVQHELLVVFASQLLEKEHSGCRALLRDDKVDDLSRMYRLYHKILRGLEPVA 301
Query: 370 QAISSYIRKTG-------------QGXXXXXXXXXXXXSSLLEFKASLDTIWEESFFKNE 416
++ G Q ++E E F +
Sbjct: 302 NIFKQHVTAEGNALVQQAEDTATNQVANTASVQEQVLIRKVIELHDKYMVYVTECFQNHT 361
Query: 417 AFCNTIKDAFEHLIN--LRQNRPAELIAKFLDEKLR-AGNKGTSEEELEGTLDKVLVLFR 473
F +K+AFE N + + AEL+A F D L+ G++ S+E +E TL+KV+ L
Sbjct: 362 LFHKALKEAFEIFCNKTVAGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVKLLA 421
Query: 474 FIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELS 533
+I KD+F FY+K LA+RLL +SA+ D E+S+++KLK +CG QFT+K+EGM D+ L+
Sbjct: 422 YISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLA 481
Query: 534 KEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLS 593
+E SF+ + GI+++V VLTTG+WP+Y D+ LP E+ ++FK FY +
Sbjct: 482 RENQNSFEDYLGSNPAANPGIDLTVTVLTTGFWPSYKSFDINLPSEMIKCVEVFKGFYET 541
Query: 594 KYSGRRLMWQNSLGHCVLKADFPKGKKELAVSLFQTVVLMLFNDAEKLSFQDIKDSTSIE 653
K R+L W SLG C + F + EL VS +Q VL+LFN +KLS+ +I ++
Sbjct: 542 KTKHRKLTWIYSLGTCHINGKFDQKAIELIVSTYQAAVLLLFNTTDKLSYTEILAQLNLS 601
Query: 654 DKELRRTLQSLACGKVRVLQKTPKGRXXXXXXXXXXXXXXTAPLYRIKVNAIQLKETVEE 713
++L R L SL+C K ++L K P + T + RIK+ V+E
Sbjct: 602 HEDLVRLLHSLSCAKYKILLKEPNTKTVSQNDAFEFNSKFTDRMRRIKIPL----PPVDE 657
Query: 714 NTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLK 766
E V +DR+Y +DAAIVRIMK+RKVL H L++E +QL KP D+K
Sbjct: 658 RKKVVEDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVSECVEQLSRMFKP-DIK 709
>AT1G02980.1 | Symbols: CUL2, ATCUL2 | cullin 2 | chr1:677869-681212
FORWARD LENGTH=742
Length = 742
Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 209/717 (29%), Positives = 359/717 (50%), Gaps = 55/717 (7%)
Query: 93 EDTWAKLKSAICA---IFLKQPDSCDLE-----KLYQAVSDLCLYKMGGNLYQRI-EKEC 143
E W+ +++ + I + PD + +LY V +LC K + Q+I ++
Sbjct: 9 EAGWSVMEAGVAKLQKILEEVPDEPPFDPVQRMQLYTTVHNLCTQKPPNDYSQQIYDRYG 68
Query: 144 EVHISAALQSL---VGQSPDLVVFLSLVERCWQDLCDQMLMIRGIAL---YLDRTYVKQT 197
V++ Q++ + + + LV+R W +Q +++R ++ YLDR Y ++
Sbjct: 69 GVYVDYNKQTVLPAIREKHGEYMLRELVKR-W---ANQKILVRWLSHFFEYLDRFYTRRG 124
Query: 198 ANVRSLWDMGLQLFRKHLSLSPEVQHKTVTGLLRMIESERLGEAVDRTLLNHLLKMFTAL 257
++ +L +G FR + E+Q K +L +I ER GE +DR LL +++ ++
Sbjct: 125 SHP-TLSAVGFISFRD--LVYQELQSKAKDAVLALIHKEREGEQIDRALLKNVIDVYCGN 181
Query: 258 GI-----YAESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVETRLQEEHDRCLIYLD 312
G+ Y E FE LE ++ +Y+ ++ Q++ PDY+ E L+ E +R YL
Sbjct: 182 GMGELVKYEEDFESFLLEDSASYYSRNASRWNQENSCPDYMIKAEESLRLEKERVTNYLH 241
Query: 313 ASTRKPLIATAEKQLLERHIPAILDK---GFSMLMDGNRIEDLQRIYSLFSRV-NALESL 368
++T L+A + +LL +++ G L+ ++++DL R+Y L+ + L+ +
Sbjct: 242 STTEPKLVAKVQNELLVVVAKQLIENEHSGCRALLRDDKMDDLARMYRLYHPIPQGLDPV 301
Query: 369 RQAISSYIRKTGQGXXXXXXXXXXXXSS---------------LLEFKASLDTIWEESFF 413
+I G ++ L++ +E F
Sbjct: 302 ADLFKQHITVEGSALIKQATEAATDKAASTSGLKVQDQVLIRQLIDLHDKFMVYVDECFQ 361
Query: 414 KNEAFCNTIKDAFEHLIN--LRQNRPAELIAKFLDEKLRAGN--KGTSEEELEGTLDKVL 469
K+ F +K+AFE N + AE++A + D L+ G + E+LE TL+KV+
Sbjct: 362 KHSLFHKALKEAFEVFCNKTVAGVSSAEILATYCDNILKTGGGIEKLENEDLELTLEKVV 421
Query: 470 VLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKD 529
L +I KD+F F++K A+RLL ++ + E+S+++K K G+QFT+K+EGM D
Sbjct: 422 KLLVYISDKDLFAEFFRKKQARRLLFDRNGNDYHERSLLTKFKELLGAQFTSKMEGMLTD 481
Query: 530 IELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKE 589
+ L+KE +F + G++ +V VLTTG+WP+Y D+ LP E+ + FK
Sbjct: 482 MTLAKEHQTNFVEFLSVNKTKKLGMDFTVTVLTTGFWPSYKTTDLNLPIEMVNCVEAFKA 541
Query: 590 FYLSKYSGRRLMWQNSLGHCVLKADFPKGKKELAVSLFQTVVLMLFNDAEKLSFQDIKDS 649
+Y +K + RRL W SLG C L F K E+ V+ +Q VL+LFN+ E+LS+ +I +
Sbjct: 542 YYGTKTNSRRLSWIYSLGTCQLAGKFDKKTIEIVVTTYQAAVLLLFNNTERLSYTEILEQ 601
Query: 650 TSIEDKELRRTLQSLACGKVRVLQKTPKGRXXXXXXXXXXXXXXTAPLYRIKVNAIQLKE 709
++ ++L R L SL+C K ++L K P R T + RI+V
Sbjct: 602 LNLGHEDLARLLHSLSCLKYKILIKEPMSRNISNTDTFEFNSKFTDKMRRIRVPL----P 657
Query: 710 TVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLK 766
++E E V +DR+Y +DAA+VRIMK+RKVL H L++E + L KP D+K
Sbjct: 658 PMDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEHLSKMFKP-DIK 713
>AT1G43140.1 | Symbols: | Cullin family protein |
chr1:16232785-16236109 FORWARD LENGTH=721
Length = 721
Score = 263 bits (671), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 206/710 (29%), Positives = 338/710 (47%), Gaps = 71/710 (10%)
Query: 93 EDTWAKLKSAICAI-----FLKQP--DSCDLEKLYQAVSDLCLYKMGGN----LYQRIEK 141
E+ W+ +K+ + + L +P D LY + D+CL + + LY +
Sbjct: 18 EEGWSVMKTGVAKLQRILEDLSEPPFDPGQYINLYTIIYDMCLQQPPNDYSQELYNKYRG 77
Query: 142 ECEVHISAALQSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIA---LYLDRTYVKQTA 198
+ + + + + + LV+R W + +++R ++ YLDR YV +
Sbjct: 78 VVDHYNKETVLPSMRERHGEYMLRELVKR-W---ANHKILVRWLSRFCFYLDRFYVARRG 133
Query: 199 NVRSLWDMGLQLFRKHLSLSPEVQHKTVTGLLRMIESERLGEAVDRTLLNHLLKMFTALG 258
+ +L D+G F H + E+Q + LL +I ER GE +DRTL+ +++ ++ G
Sbjct: 134 -LPTLNDVGFTSF--HDLVYQEIQSEAKDVLLALIHKEREGEQIDRTLVKNVIDVYCGNG 190
Query: 259 -----IYAESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVETRLQEEHDRCLIYLDA 313
IY E FE L+ T+ +Y+ + ++ Q+ PDY+ E L+ E +R YL +
Sbjct: 191 VGQMVIYEEDFESFLLQDTASYYSRKASRWSQEDSCPDYMLKAEECLKLEKERVTNYLHS 250
Query: 314 STRKPLIATAEKQLLERHIPAILDK---GFSMLMDGNRIEDLQRIYSLFSRV-NALESLR 369
+T L+ + +LL +++ G L+ +++ DL R+Y L+ + LE +
Sbjct: 251 TTEPKLVEKVQNELLVVVAKQLIENEHSGCLALLRDDKMGDLSRMYRLYRLIPQGLEPIA 310
Query: 370 QAISSYIRKTGQGXXXXXXXXXXXXSSL---------LEFKASLDTIWEESFFKNEAFCN 420
++ G + +E +E F K+ F
Sbjct: 311 DLFKQHVTAEGNALIKQAADAATNQDASASQVLVRKEIELHDKYMVYVDECFQKHSLFHK 370
Query: 421 TIKDAFEHLIN--LRQNRPAELIAKFLDE--KLRAGNKGTSEEELEGTLDKVLVLFRFIQ 476
+K+AFE N + AE++A + D K R G++ S+E E TL+KV+ L +I
Sbjct: 371 LLKEAFEVFCNKTVAGASSAEILATYCDNILKTRGGSEKLSDEATEITLEKVVNLLVYIS 430
Query: 477 GKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEI 536
KD+F FY+K A+RLL +S I K T DI L++E+
Sbjct: 431 DKDLFAEFYRKKQARRLLFDRSG--------IMKEVT---------------DITLAREL 467
Query: 537 NESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYS 596
+F A GI+ +V VLTTG+WP+Y D+ LP E+ + FK FY +K +
Sbjct: 468 QTNFVDYLSANMTTKLGIDFTVTVLTTGFWPSYKTTDLNLPTEMVNCVEAFKVFYGTKTN 527
Query: 597 GRRLMWQNSLGHCVLKADFPKGKKELAVSLFQTVVLMLFNDAEKLSFQDIKDSTSIEDKE 656
RRL W SLG C + F K EL VS +Q VL+LFN+AE+LS+ +I + ++ ++
Sbjct: 528 SRRLSWIYSLGTCHILGKFEKKTMELVVSTYQAAVLLLFNNAERLSYTEISEQLNLSHED 587
Query: 657 LRRTLQSLACGKVRVLQKTPKGRXXXXXXXXXXXXXXTAPLYRIKVNAIQLKETVEENTS 716
L R L SL+C K ++L K P R T + +I+V ++E
Sbjct: 588 LVRLLHSLSCLKYKILIKEPMSRTISKTDTFEFNSKFTDKMRKIRVPL----PPMDERKK 643
Query: 717 TTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLK 766
E V +DR+Y +DAA+VRIMK+RKVL+H L++E + L KP D+K
Sbjct: 644 VVEDVDKDRRYAIDAALVRIMKSRKVLAHQQLVSECVEHLSKMFKP-DIK 692
>AT4G12100.1 | Symbols: | Cullin family protein |
chr4:7246453-7248127 REVERSE LENGTH=434
Length = 434
Score = 186 bits (472), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 120/347 (34%), Positives = 189/347 (54%), Gaps = 30/347 (8%)
Query: 95 TWAKLKSAICAI-----FLKQPDSCDLEKLYQAVSDLCLY--KMGGNLYQRIEKECEVHI 147
W LK AI I + K D +++AV CL + ++ ++ ECE HI
Sbjct: 80 AWDLLKPAIKIILDDDEYKKPGDVLCFTTIFRAVKRACLGDPRQSELVFNLVKHECEPHI 139
Query: 148 SAALQSL---VGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTANVRSLW 204
+ +QSL S D VFL V W D +M ++ +A+Y QT N +LW
Sbjct: 140 AELIQSLEKNCSGSDDPSVFLPHVYNRWLDFKRKMSLVSDVAMY-------QTLNGLTLW 192
Query: 205 DMGLQLFRKHLSLSPEVQHKTVTGLLRMIESERLGEAVDRT--LLNHLLKMFTALGIYAE 262
D+G +LF K LS++P++Q + +TG+LR+I ERLG+A + T LL +L+ MF
Sbjct: 193 DVGQKLFHKQLSMAPQLQDQVITGILRLITDERLGKAANNTSDLLKNLMDMFRMQWQCTY 252
Query: 263 SFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVETRLQEEHDRC--LIYLDASTRKPLI 320
++ PFL+ TS+FYA E + +Q+SD+ YLK+VE E ++C + +S+R L+
Sbjct: 253 VYKDPFLDSTSKFYAEEAEQVLQRSDISHYLKYVERTFLAEEEKCDKHYFFFSSSRSRLM 312
Query: 321 ATAEKQLLERHIPAILDKGFSMLMDGNRIEDLQRIYSLFSRVNALESLRQAISSYIRKTG 380
+ QLLE H + L++GF +LMD + I+DL+R+Y LFS V++ + + + + +YI G
Sbjct: 313 KVLKSQLLEAH-SSFLEEGFMLLMDESLIDDLRRMYRLFSMVDSEDYIDRILRAYILAKG 371
Query: 381 QGXXXXXXXXXXXXSSLLEFKASLDTIWEESFFKNEAFCNTIKDAFE 427
+G SL E S+D IW + F +++ TI+D FE
Sbjct: 372 EG--------ARQEGSLQELHTSIDKIWHQCFGQDDLLDKTIRDCFE 410
>AT3G46910.1 | Symbols: | Cullin family protein |
chr3:17278636-17279652 FORWARD LENGTH=247
Length = 247
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 125/225 (55%), Gaps = 23/225 (10%)
Query: 91 FEEDTWAKLKSAICAIFLKQPDSCDLEKLYQAVS-DLCLYKMGGNLYQRIEKECEVHISA 149
+ ED W LK AI AIFL +P L+ AV+ C G LY+ I +ECE++ISA
Sbjct: 25 YVEDAWTMLKPAIRAIFLDEPQDFACSGLFNAVNKSWCEKSSGEALYKLILEECEIYISA 84
Query: 150 ALQSLVGQS-PDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTANVRSLWDMGL 208
A+QSL Q D +FLSL+E+CW D ++ + IA QT S+WD+G
Sbjct: 85 AIQSLESQCDTDPSLFLSLLEKCWLDFRRKLQFLCSIA-----GGEGQTVGPHSVWDLGS 139
Query: 209 QLFRKHLSLSPEVQHKTVTGLLRMIESERLGEAVDRTLL---------------NHLLKM 253
+L KHL + +V+ K ++ +L++I +R +VD T L N+L +
Sbjct: 140 ELSPKHLFSAQKVRDKLLSIILQLIRDQRSFMSVDMTQLKNTTRPVMSVHMTQLNNLRGL 199
Query: 254 FTALGIY-AESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVE 297
F +Y + F+KPF++C EFY+AE M++ +QSD+P YLK VE
Sbjct: 200 FYGQSLYKSPFFKKPFIDCAVEFYSAEAMQFKEQSDIPLYLKRVE 244
>AT1G59790.1 | Symbols: | Cullin family protein |
chr1:22001504-22003385 FORWARD LENGTH=374
Length = 374
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 140/289 (48%), Gaps = 29/289 (10%)
Query: 93 EDTWAKLKSAICA---IFLKQPDSC----DLEKLYQAVSDLCLYK--MGGNLYQRIEKEC 143
E+ W+ ++ I I +P+ + KLY + D+C+ + LY++ K
Sbjct: 15 EEGWSNIQKGITKLIRILEGEPEPTFYFSECFKLYTIIYDMCVQRSDYSQQLYEKYRKVI 74
Query: 144 EVHISAALQSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIA---LYLDRTYVKQTA-N 199
E + + + + D + LV+R W + +M++ ++ +Y+DR V+++
Sbjct: 75 EDYTIQTVLPSLREKHDEDMLRELVKR-WNN---HKIMVKWLSKFFVYIDRHLVRRSKIP 130
Query: 200 VRSLWDMGLQLFRKHLSL-SPEVQHKTVTGLLRMIESERLGEAVDRTLLNHLLKMFTALG 258
+ SL ++GL F L L E+Q ++ +I ER GE +DR L+ ++L ++ G
Sbjct: 131 IPSLDEVGLTCF---LDLVYCEMQSTAKEVVIALIHKEREGEQIDRALVKNVLDIYVENG 187
Query: 259 I-----YAESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVETRLQEEHDRCLIYLDA 313
+ Y E FE L+ T+ +Y+ + ++ ++ PDY+ VE L+ E +R YL +
Sbjct: 188 MGTLEKYEEDFESFMLQDTASYYSRKASRWTEEDSCPDYMIKVEECLKMERERVTHYLHS 247
Query: 314 STRKPLIATAEKQLLERHIPAILDK---GFSMLMDGNRIEDLQRIYSLF 359
T L+ + +LL L+ GFS L+ ++ DL RIY L+
Sbjct: 248 ITEPKLVEKIQNELLVMVTKNRLENEHSGFSALLRDDKKNDLSRIYRLY 296
>AT1G59800.1 | Symbols: | Cullin family protein |
chr1:22004964-22006172 FORWARD LENGTH=255
Length = 255
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 119 LYQAVSDLCLYKMGGNLYQRIEKECEVH-ISAALQSLVGQSPDLVVFLSLVERCWQDLCD 177
++ A +C YK LY + + E + I L SL + D + L +R W
Sbjct: 43 MHTATYRICAYKNPQQLYDKYRELIENYAIQTVLPSL-REKHDECMLRELAKR-WNA--- 97
Query: 178 QMLMIRGIA---LYLDRTYVKQTANVRSLWDMGLQLFRKHLSLSPEVQHKTVTGLLRMIE 234
L++R + +YLD +++ + + SL ++GL FR + E+Q +L +I
Sbjct: 98 HKLLVRLFSRRLVYLDDSFLSKKG-LPSLREVGLNCFRDQVY--REMQSMAAEAILALIH 154
Query: 235 SERLGEAVDRTLLNHLLKMFTALGI-----YAESFEKPFLECTSEFYAAEGMKYMQQSDV 289
ER GE +DR L+ +++ +F G+ Y E FE+ L+ T+ +Y+++ +++Q+
Sbjct: 155 KEREGEQIDRELVRNVIDVFVENGMGTLKKYEEDFERLMLQDTASYYSSKASRWIQEESC 214
Query: 290 PDYLKHVETRLQEEHDRCLIYLDASTRKPL 319
DY + LQ E +R YL +T L
Sbjct: 215 LDYTLKPQQCLQRERERVTHYLHPTTEPKL 244
>AT2G04660.1 | Symbols: APC2 | anaphase-promoting complex/cyclosome
2 | chr2:1624933-1629039 FORWARD LENGTH=865
Length = 865
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 6/200 (3%)
Query: 465 LDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLE 524
+D + +L I K+ Y+ LA++LL ID E + LK G + E
Sbjct: 537 VDILGMLVDIIGSKEQLVNEYRVMLAEKLLNKTDYDIDTEIRTVELLKIHFGEASMQRCE 596
Query: 525 GMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLT-----TGYWPTYPPMDVRLPHE 579
M D+ SK +N + K++SQ +L E+SV LT T +WP + LP
Sbjct: 597 IMLNDLIDSKRVNTNIKKASQTGAELREN-ELSVDTLTSTILSTNFWPPIQDEPLELPGP 655
Query: 580 LNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKADFPKGKKELAVSLFQTVVLMLFNDAE 639
++ + Y + R+L+W+ +LG L+ F + VS ++M F + +
Sbjct: 656 VDKLLSDYANRYHEIKTPRKLLWKKNLGTVKLELQFEDRAMQFTVSPTHAAIIMQFQEKK 715
Query: 640 KLSFQDIKDSTSIEDKELRR 659
+++D+ + I L R
Sbjct: 716 SWTYKDLAEVIGIPIDALNR 735