Miyakogusa Predicted Gene

Lj6g3v1934040.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1934040.1 tr|G7IPX9|G7IPX9_MEDTR
Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Medicago
truncatula GN=M,73.91,0,Glycos_transf_4,Glycosyl transferase, family
4; seg,NULL; PHOSPHO-N-ACETYLMURAMOYL-PENTAPEPTIDE-TRAN,CUFF.60217.1
         (455 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G18270.1 | Symbols: ATTRANS11, TRANS11 | translocase 11 | chr...   278   6e-75

>AT4G18270.1 | Symbols: ATTRANS11, TRANS11 | translocase 11 |
           chr4:10099364-10101897 REVERSE LENGTH=480
          Length = 480

 Score =  278 bits (711), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 179/413 (43%), Positives = 235/413 (56%), Gaps = 28/413 (6%)

Query: 49  QQYRCSAP----RNAVSTKAFDEDSFDMPILDDWNTDDNSPAYVFXXXXXXXXXXXVFLT 104
             ++ SAP     ++VS KAFD+D+FD      +  D  +  Y               L 
Sbjct: 41  SSFKFSAPSLQRHSSVSVKAFDDDTFDF-----YTGDIFAATYAISSSEGEESDGDYALN 95

Query: 105 PVNDVELPSVSSSNKDALTIAAHRLATIGRGSRNHRIKLGIFITMGLIIFLTVLLIYVDW 164
            V +                 A +L    RG + HRI+ GI   +GL+ FL++LL+ +D 
Sbjct: 96  VVTET---------------TAQKLGKFPRGRKKHRIRYGI--NLGLLAFLSLLLLLMDS 138

Query: 165 CSWRIVRLPLSPFFLTCPFLISAILASFAGYVCVPIFRYFEVIHVVKQQGPFRHRLKKRT 224
            +W+IVRLPL P+FL+ PF  SAIL + AGY+ VP+     V   ++  GP  H  +   
Sbjct: 139 FAWKIVRLPLPPYFLSMPFFTSAILVTLAGYIFVPLLDRLRVHEPIRTLGPVPHNRRPTI 198

Query: 225 PTLGGLFFVPIGIIVAHAFAGSSSVEVCGAAGVTIAFAAVGLLSDILSITKNHWRGLPAM 284
           PT+GGLFFVPIG++VA A    SS+EV GAA  T+AFAA+GL+ D LS+   +  GL A 
Sbjct: 199 PTMGGLFFVPIGVVVAIALNKVSSIEVLGAAAATVAFAAIGLIDDSLSLYSENNNGLSAK 258

Query: 285 AEVLSEVAVGMWFSFWLDITSISSPYGMKMXXXXXXXXXXX--XRYYQFLTSFCFVSMGH 342
            ++L E AVG  F+FWL+  S+SSPYGMKM              + Y  LTSF FVSMG+
Sbjct: 259 IQLLLEAAVGTCFAFWLETASLSSPYGMKMLVPLPSPLGLVFLGKLYLLLTSFYFVSMGN 318

Query: 343 GVKXXXXXXXXXXXXXXXXFTGMSIAVLPICSELAIFGASMAGSCVGFLLHNRYKASVFM 402
            VK                F  M+IAVLPICS+L++FGASMAG+C GFLLHNRY+ASV M
Sbjct: 319 LVKATDGLDGLAGGIAALCFVAMAIAVLPICSDLSVFGASMAGACFGFLLHNRYRASVSM 378

Query: 403 GNTXXXXXXXXXXXXXXCSGMFFPLFISSGIFILESSSVIAQVLYLKITKGLR 455
           G+T              CSGMFFPLFISSG+ +LE+SSVI QV+Y   TK L+
Sbjct: 379 GDTGSLALGGALAAMAACSGMFFPLFISSGVAVLEASSVIIQVVYYSTTKRLK 431