Miyakogusa Predicted Gene
- Lj6g3v1931800.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1931800.1 Non Chatacterized Hit- tr|I1HE34|I1HE34_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,43.64,5e-17,zf-CCCH,Zinc finger, CCCH-type; ZF_C3H1,Zinc finger,
CCCH-type; no description,NULL; ZINC FINGER CCC,CUFF.60209.1
(486 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G06410.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 336 2e-92
AT5G18550.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 330 1e-90
AT2G47850.3 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 289 3e-78
AT2G47850.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 289 3e-78
AT3G02830.1 | Symbols: ZFN1 | zinc finger protein 1 | chr3:61407... 194 1e-49
AT5G16540.2 | Symbols: ZFN3 | zinc finger nuclease 3 | chr5:5403... 188 7e-48
AT5G16540.1 | Symbols: ZFN3 | zinc finger nuclease 3 | chr5:5403... 188 8e-48
AT5G16540.3 | Symbols: ZFN3 | zinc finger nuclease 3 | chr5:5403... 187 1e-47
AT2G47850.2 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 167 1e-41
AT1G04990.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 164 2e-40
AT1G04990.2 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 164 2e-40
AT5G63260.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 138 7e-33
AT3G48440.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 136 4e-32
AT3G12680.1 | Symbols: HUA1 | floral homeotic protein (HUA1) | c... 134 2e-31
AT5G63260.2 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 131 1e-30
AT2G32930.1 | Symbols: ZFN2 | zinc finger nuclease 2 | chr2:1396... 131 1e-30
AT2G32930.2 | Symbols: ZFN2 | zinc finger nuclease 2 | chr2:1396... 131 1e-30
AT1G48195.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 77 3e-14
AT1G29570.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 51 2e-06
AT1G29600.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 50 3e-06
>AT3G06410.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr3:1947471-1949528 REVERSE LENGTH=462
Length = 462
Score = 336 bits (862), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 195/411 (47%), Positives = 227/411 (55%), Gaps = 18/411 (4%)
Query: 1 MEQYGR-SNEGSRSDXXXXXXXXXXXXXXXXXMWQLGLGGAASD----ESYPQRPDEADC 55
ME+YGR EGSRSD MW+LGL G ESYP+RPDE DC
Sbjct: 1 MERYGRPGEEGSRSDPSLEWTSHGGETAVEAPMWRLGLSGGGGGGGGGESYPERPDEPDC 60
Query: 56 SYYLRTGFCGFGSRCRFNHPRDRGAVIGAAR-TAGDYPERAGQPVCQYYMRTGSCKFGAS 114
YYLRTG CG+GSRCRFNHPRDRGAVIG R AG PER G PVCQ++MRTG+CKFGAS
Sbjct: 61 IYYLRTGVCGYGSRCRFNHPRDRGAVIGGVRGEAGALPERMGHPVCQHFMRTGTCKFGAS 120
Query: 115 CKYHHPRQAGGMAS--PVSLNYYGYPIRPGEKECSYYVKTGQCKFSATCKFHHPLPTGVQ 172
CKYHHPRQ GG S PVSL+Y GYP+RPGEKECSYY++TGQCKF TC+F+HP+P VQ
Sbjct: 121 CKYHHPRQGGGGGSVAPVSLSYLGYPLRPGEKECSYYLRTGQCKFGLTCRFNHPVPLAVQ 180
Query: 173 IQAXXXXXXXXXXXXXXXXXXYXXXXXXXXXXXXXXXXLVARPPLLPGSFVHSPYG-PVV 231
Y ++ RP L GS++ SPYG P+V
Sbjct: 181 GPP-QQPQQQQPQPQPQLQTIYPTLQSQSIPSSQQYGLVLTRPSFLTGSYLQSPYGPPMV 239
Query: 232 VSPTMVPFSGWGPYQXXXXXXXXXXXXXXXXXXXQLYGITHLPSSAAAYTGPYQXXXXXX 291
+ P MVP+SGW PYQ +YG+T L SA AYTG YQ
Sbjct: 240 LPPGMVPYSGWNPYQ-ASLSAMPSPGTQPSIGSSSIYGLTPLSPSATAYTGTYQ-----S 293
Query: 292 XXXXXXXXXXXXERPYPPEIQYYSKIGESKLGPSYRYQHQADMNAAPKVNVILSXXXXXX 351
+RP PE QY+ + G+ K G S RY H D PK ++LS
Sbjct: 294 VPSSNSTSKEFPQRPDQPECQYFMRTGDCKFGSSCRYHHPVDA-VPPKTGIVLSSIGLPL 352
Query: 352 XXXXXXCTHYAQRGVCKFGPACKFDH-XXXXXXXXXXXXXLTDMPVAPYPV 401
CTH+AQ G+CKFGPACKFDH LTDMPVAPYP+
Sbjct: 353 RPGVAQCTHFAQHGICKFGPACKFDHSMSSSLSYSPSASSLTDMPVAPYPI 403
>AT5G18550.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr5:6160515-6162729 FORWARD LENGTH=465
Length = 465
Score = 330 bits (847), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 207/455 (45%), Positives = 253/455 (55%), Gaps = 36/455 (7%)
Query: 1 MEQYGRSNEG-SRSDXXXXXXXXXXXXXXXXXMWQLGLGGAASD-ESYPQRPDEADCSYY 58
ME+YG + E SRSD MW+LGL G E++P+RPDE DC YY
Sbjct: 1 MERYGGAGEDESRSDPSHEWSAQGTETGIEASMWRLGLRGGGGGGETFPERPDEPDCIYY 60
Query: 59 LRTGFCGFGSRCRFNHPRDRGAVIGAART-AGDYPERAGQPVCQYYMRTGSCKFGASCKY 117
LRTG CG+GSRCRFNHPR+R V+G RT AG++PER GQPVCQ++MRTG+CKFGASCKY
Sbjct: 61 LRTGVCGYGSRCRFNHPRNRAPVLGGLRTEAGEFPERMGQPVCQHFMRTGTCKFGASCKY 120
Query: 118 HHPRQAGG--MASPVSLNYYGYPIRPGEKECSYYVKTGQCKFSATCKFHHPLPTGVQIQA 175
HHPRQ GG +PVSLNY G+P+RPGEKECSY+++TGQCKF +TC++HHP+P GVQ +
Sbjct: 121 HHPRQGGGGDSVTPVSLNYMGFPLRPGEKECSYFMRTGQCKFGSTCRYHHPVPPGVQAPS 180
Query: 176 XXXXXXXXXXXXXXXXXXYXXXXXXXXXXXXXXXXLVARPPLLPGSFVHSPYG--PVVVS 233
Y ++ARP LLPGS+V SPYG +V+
Sbjct: 181 QQQQQQLSAGPTM-----YPSLQSQTVPSSQQYGVVLARPQLLPGSYVQSPYGYGQMVLP 235
Query: 234 PTMVPFSGWGPYQXXXXXXXXXXXXXXXXXXXQLYGITHLPSSAAAY-TGPYQXXXXXXX 292
P MVP+SGW PYQ +YGIT L SA AY +GP
Sbjct: 236 PGMVPYSGWNPYQASVSAMPSPGTQPSMGTSS-VYGITPLSPSAPAYQSGP-------SS 287
Query: 293 XXXXXXXXXXXERPYPPEIQYYSKIGESKLGPSYRYQHQADMNAAPKVNVILSXXXXXXX 352
+RP PE QY+ + G+ K G S R+ H M AA LS
Sbjct: 288 TGVSNKEQTFPQRPEQPECQYFMRTGDCKFGTSCRFHH--PMEAASPEASTLSHIGLPLR 345
Query: 353 XXXXXCTHYAQRGVCKFGPACKFDH--XXXXXXXXXXXXXLTDMPVAPYPVGSSIGTLAP 410
CTH+AQ G+CKFGPACKFDH LTDMPVAPYP SS+GTLAP
Sbjct: 346 PGAVPCTHFAQHGICKFGPACKFDHSLGSSSLSYSPSPSSLTDMPVAPYP--SSLGTLAP 403
Query: 411 PS---------SSSELQPGLTTGSNKESVPSRISS 436
S SSS ++P TT E+V + +SS
Sbjct: 404 SSSSDQCTELISSSSIEPITTTTGGSETVAAGVSS 438
>AT2G47850.3 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr2:19595953-19598119 FORWARD LENGTH=468
Length = 468
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 159/375 (42%), Positives = 195/375 (52%), Gaps = 17/375 (4%)
Query: 32 MWQLGLGGAASDESYPQRPDEADCSYYLRTGFCGFGSRCRFNHPRDRGAVIGAARTAGDY 91
MW+LGLG +SYP+RP DC+YY+RTG CG+G+RCR+NHPRDR +V R G Y
Sbjct: 32 MWRLGLG----SDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEATVRATGQY 87
Query: 92 PERAGQPVCQYYMRTGSCKFGASCKYHHPRQAGGMASPVSLNYYGYPIRPGEKECSYYVK 151
PER G+P CQ+Y++TG+CKFGASCK+HHP+ AGG S V LN YGYP+R G+ ECSYY+K
Sbjct: 88 PERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVREGDNECSYYLK 147
Query: 152 TGQCKFSATCKFHHPLPTGVQIQAXXXXXXXXXXXXXXXXXXYXXXXXXXXXXXXXXXXL 211
TGQCKF TCKFHHP P G +
Sbjct: 148 TGQCKFGITCKFHHPQPAGTTVPPPPASAPQFYPS--------VQSLMPDQYGGPSSSLR 199
Query: 212 VARPPLLPGSFVHSPYGPVVVSPTMVPFSGWGPYQXXXXXXXXXXXXXXXXXXXQLYGIT 271
VAR LLPGS++ YGP++++P +VP GW PY LYG+T
Sbjct: 200 VAR-TLLPGSYMQGAYGPMLLTPGVVPIPGWSPYS-APVSPALSPGAQHAVGATSLYGVT 257
Query: 272 HLPSSAAAYTGPYQXXXXXXXXXXXXXXXXXXERPYPPEIQYYSKIGESKLGPSYRYQHQ 331
L S+ + G Y ERP PE QYY K G+ K G S ++ H
Sbjct: 258 QLTSTTPSLPGVY--PSLSSPTGVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHP 315
Query: 332 ADMNAAPKVNVILSXXXXXXXXXXXXCTHYAQRGVCKFGPACKFDHXXXXXXXXXXXXXL 391
D P+ N +LS CT Y Q G CKFG CKFDH L
Sbjct: 316 RD-RVPPRANCVLSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHPMGTIRYNPSASSL 374
Query: 392 TDMPVAPYPVGSSIG 406
D PVAPYPV S +G
Sbjct: 375 ADAPVAPYPVSSLLG 389
>AT2G47850.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr2:19595953-19598119 FORWARD LENGTH=468
Length = 468
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 159/375 (42%), Positives = 195/375 (52%), Gaps = 17/375 (4%)
Query: 32 MWQLGLGGAASDESYPQRPDEADCSYYLRTGFCGFGSRCRFNHPRDRGAVIGAARTAGDY 91
MW+LGLG +SYP+RP DC+YY+RTG CG+G+RCR+NHPRDR +V R G Y
Sbjct: 32 MWRLGLG----SDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEATVRATGQY 87
Query: 92 PERAGQPVCQYYMRTGSCKFGASCKYHHPRQAGGMASPVSLNYYGYPIRPGEKECSYYVK 151
PER G+P CQ+Y++TG+CKFGASCK+HHP+ AGG S V LN YGYP+R G+ ECSYY+K
Sbjct: 88 PERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVREGDNECSYYLK 147
Query: 152 TGQCKFSATCKFHHPLPTGVQIQAXXXXXXXXXXXXXXXXXXYXXXXXXXXXXXXXXXXL 211
TGQCKF TCKFHHP P G +
Sbjct: 148 TGQCKFGITCKFHHPQPAGTTVPPPPASAPQFYPS--------VQSLMPDQYGGPSSSLR 199
Query: 212 VARPPLLPGSFVHSPYGPVVVSPTMVPFSGWGPYQXXXXXXXXXXXXXXXXXXXQLYGIT 271
VAR LLPGS++ YGP++++P +VP GW PY LYG+T
Sbjct: 200 VAR-TLLPGSYMQGAYGPMLLTPGVVPIPGWSPYS-APVSPALSPGAQHAVGATSLYGVT 257
Query: 272 HLPSSAAAYTGPYQXXXXXXXXXXXXXXXXXXERPYPPEIQYYSKIGESKLGPSYRYQHQ 331
L S+ + G Y ERP PE QYY K G+ K G S ++ H
Sbjct: 258 QLTSTTPSLPGVY--PSLSSPTGVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHP 315
Query: 332 ADMNAAPKVNVILSXXXXXXXXXXXXCTHYAQRGVCKFGPACKFDHXXXXXXXXXXXXXL 391
D P+ N +LS CT Y Q G CKFG CKFDH L
Sbjct: 316 RD-RVPPRANCVLSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHPMGTIRYNPSASSL 374
Query: 392 TDMPVAPYPVGSSIG 406
D PVAPYPV S +G
Sbjct: 375 ADAPVAPYPVSSLLG 389
>AT3G02830.1 | Symbols: ZFN1 | zinc finger protein 1 |
chr3:614075-615916 FORWARD LENGTH=397
Length = 397
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 84/139 (60%), Positives = 103/139 (74%), Gaps = 2/139 (1%)
Query: 32 MWQLGLGGAASDE--SYPQRPDEADCSYYLRTGFCGFGSRCRFNHPRDRGAVIGAARTAG 89
MWQ+ L + E SYP+RP E DCSYY+RTG C FGS CRFNHPRDR VI AR G
Sbjct: 21 MWQMNLSSDETMETGSYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATARMRG 80
Query: 90 DYPERAGQPVCQYYMRTGSCKFGASCKYHHPRQAGGMASPVSLNYYGYPIRPGEKECSYY 149
+YPER GQP C+YY++TG+CKFG +CK+HHPR G+A VSLN GYP+R E +C+Y+
Sbjct: 81 EYPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVDCAYF 140
Query: 150 VKTGQCKFSATCKFHHPLP 168
++TG CKF TCKF+HP P
Sbjct: 141 LRTGHCKFGGTCKFNHPQP 159
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 50/77 (64%)
Query: 91 YPERAGQPVCQYYMRTGSCKFGASCKYHHPRQAGGMASPVSLNYYGYPIRPGEKECSYYV 150
+PER GQP CQ+YM+TG CKFG CK+HHPR L+ G P+RPGE C +Y
Sbjct: 271 FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLLSSIGLPLRPGEPLCVFYT 330
Query: 151 KTGQCKFSATCKFHHPL 167
+ G CKF +CKF HP+
Sbjct: 331 RYGICKFGPSCKFDHPM 347
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 43 DESYPQRPDEADCSYYLRTGFCGFGSRCRFNHPRDRGA-VIGAARTAGDYPERAGQPVCQ 101
+ +P+RP + +C +Y++TG C FG+ C+F+HPRDR A ++ P R G+P+C
Sbjct: 268 ENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLLSSIGLPLRPGEPLCV 327
Query: 102 YYMRTGSCKFGASCKYHHPRQA 123
+Y R G CKFG SCK+ HP +
Sbjct: 328 FYTRYGICKFGPSCKFDHPMRV 349
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 304 ERPYPPEIQYYSKIGESKLGPSYRYQHQADMNAAPKVNVILSXXXXXXXXXXXXCTHYAQ 363
ERP PE Q+Y K G+ K G ++ H D A P + +LS C Y +
Sbjct: 273 ERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPP-DCLLSSIGLPLRPGEPLCVFYTR 331
Query: 364 RGVCKFGPACKFDH 377
G+CKFGP+CKFDH
Sbjct: 332 YGICKFGPSCKFDH 345
>AT5G16540.2 | Symbols: ZFN3 | zinc finger nuclease 3 |
chr5:5403437-5405034 FORWARD LENGTH=368
Length = 368
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 100/138 (72%), Gaps = 3/138 (2%)
Query: 32 MWQLGLGGAAS---DESYPQRPDEADCSYYLRTGFCGFGSRCRFNHPRDRGAVIGAARTA 88
MWQ+ LG + D SYP+R E DC+YY+RTG C FGS CRFNHP DR VI AR
Sbjct: 22 MWQMNLGSDDTMGVDGSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIK 81
Query: 89 GDYPERAGQPVCQYYMRTGSCKFGASCKYHHPRQAGGMASPVSLNYYGYPIRPGEKECSY 148
G+YPER GQP C++Y++TG+CKFG +CK+HHPR G+ VS+N YP+RP E +CSY
Sbjct: 82 GEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSY 141
Query: 149 YVKTGQCKFSATCKFHHP 166
+++ GQCKF TCKF+HP
Sbjct: 142 FLRIGQCKFGGTCKFNHP 159
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 81/201 (40%), Gaps = 74/201 (36%)
Query: 34 QLGLGGAASDE--SYPQRPDEADCSYYLRT------GFCGFG------------------ 67
+ G+ G+ S SYP RP+E DCSY+LR G C F
Sbjct: 116 KAGIDGSVSVNVLSYPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPV 175
Query: 68 ---------------SRCRF--NHPR----------DRGAVIGAARTAGD---------- 90
SR F N PR +G + + +G+
Sbjct: 176 YSALQSLTGQPSYSWSRTSFVANPPRLQDPSGFASGSQGGLFSSGFHSGNSVPLGFYALP 235
Query: 91 ----YPERAGQPVCQYYMRTGSCKFGASCKYHHPRQAGGMASPVSLNYYGYPIRPGEKEC 146
+PER GQP CQ+YM+TG CKFG CK+HHPR L+ GE C
Sbjct: 236 RENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLS-------SGEPLC 288
Query: 147 SYYVKTGQCKFSATCKFHHPL 167
+Y + G CKF +CKF HP+
Sbjct: 289 VFYSRYGICKFGPSCKFDHPM 309
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Query: 35 LGLGGAASDESYPQRPDEADCSYYLRTGFCGFGSRCRFNHPRDRGAVIGAARTAGDYPER 94
LG + +P+RP + +C +Y++TG C FG+ C+F+HPRDR D
Sbjct: 229 LGFYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQT------PPPDCVLS 282
Query: 95 AGQPVCQYYMRTGSCKFGASCKYHHPRQA 123
+G+P+C +Y R G CKFG SCK+ HP +
Sbjct: 283 SGEPLCVFYSRYGICKFGPSCKFDHPMRV 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 304 ERPYPPEIQYYSKIGESKLGPSYRYQHQADMNAAPKVNVILSXXXXXXXXXXXXCTHYAQ 363
ERP PE Q+Y K G+ K G ++ H D P V+ S C Y++
Sbjct: 242 ERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSGEPL--------CVFYSR 293
Query: 364 RGVCKFGPACKFDH 377
G+CKFGP+CKFDH
Sbjct: 294 YGICKFGPSCKFDH 307
>AT5G16540.1 | Symbols: ZFN3 | zinc finger nuclease 3 |
chr5:5403437-5405034 FORWARD LENGTH=375
Length = 375
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 100/138 (72%), Gaps = 3/138 (2%)
Query: 32 MWQLGLGGAAS---DESYPQRPDEADCSYYLRTGFCGFGSRCRFNHPRDRGAVIGAARTA 88
MWQ+ LG + D SYP+R E DC+YY+RTG C FGS CRFNHP DR VI AR
Sbjct: 22 MWQMNLGSDDTMGVDGSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIK 81
Query: 89 GDYPERAGQPVCQYYMRTGSCKFGASCKYHHPRQAGGMASPVSLNYYGYPIRPGEKECSY 148
G+YPER GQP C++Y++TG+CKFG +CK+HHPR G+ VS+N YP+RP E +CSY
Sbjct: 82 GEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSY 141
Query: 149 YVKTGQCKFSATCKFHHP 166
+++ GQCKF TCKF+HP
Sbjct: 142 FLRIGQCKFGGTCKFNHP 159
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 86/201 (42%), Gaps = 67/201 (33%)
Query: 34 QLGLGGAASDE--SYPQRPDEADCSYYLRT------GFCGFG------------------ 67
+ G+ G+ S SYP RP+E DCSY+LR G C F
Sbjct: 116 KAGIDGSVSVNVLSYPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPV 175
Query: 68 ---------------SRCRF--NHPR----------DRGAVIGAARTAGD---------- 90
SR F N PR +G + + +G+
Sbjct: 176 YSALQSLTGQPSYSWSRTSFVANPPRLQDPSGFASGSQGGLFSSGFHSGNSVPLGFYALP 235
Query: 91 ----YPERAGQPVCQYYMRTGSCKFGASCKYHHPRQAGGMASPVSLNYYGYPIRPGEKEC 146
+PER GQP CQ+YM+TG CKFG CK+HHPR L+ G P+RPGE C
Sbjct: 236 RENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLC 295
Query: 147 SYYVKTGQCKFSATCKFHHPL 167
+Y + G CKF +CKF HP+
Sbjct: 296 VFYSRYGICKFGPSCKFDHPM 316
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 304 ERPYPPEIQYYSKIGESKLGPSYRYQHQADMNAAPKVNVILSXXXXXXXXXXXXCTHYAQ 363
ERP PE Q+Y K G+ K G ++ H D P + +LS C Y++
Sbjct: 242 ERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPP-DCVLSSVGLPLRPGEPLCVFYSR 300
Query: 364 RGVCKFGPACKFDH 377
G+CKFGP+CKFDH
Sbjct: 301 YGICKFGPSCKFDH 314
>AT5G16540.3 | Symbols: ZFN3 | zinc finger nuclease 3 |
chr5:5403598-5405034 FORWARD LENGTH=354
Length = 354
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 100/138 (72%), Gaps = 3/138 (2%)
Query: 32 MWQLGLGGAAS---DESYPQRPDEADCSYYLRTGFCGFGSRCRFNHPRDRGAVIGAARTA 88
MWQ+ LG + D SYP+R E DC+YY+RTG C FGS CRFNHP DR VI AR
Sbjct: 1 MWQMNLGSDDTMGVDGSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIK 60
Query: 89 GDYPERAGQPVCQYYMRTGSCKFGASCKYHHPRQAGGMASPVSLNYYGYPIRPGEKECSY 148
G+YPER GQP C++Y++TG+CKFG +CK+HHPR G+ VS+N YP+RP E +CSY
Sbjct: 61 GEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSY 120
Query: 149 YVKTGQCKFSATCKFHHP 166
+++ GQCKF TCKF+HP
Sbjct: 121 FLRIGQCKFGGTCKFNHP 138
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 86/201 (42%), Gaps = 67/201 (33%)
Query: 34 QLGLGGAASDE--SYPQRPDEADCSYYLRT------GFCGFG------------------ 67
+ G+ G+ S SYP RP+E DCSY+LR G C F
Sbjct: 95 KAGIDGSVSVNVLSYPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPV 154
Query: 68 ---------------SRCRF--NHPR----------DRGAVIGAARTAGD---------- 90
SR F N PR +G + + +G+
Sbjct: 155 YSALQSLTGQPSYSWSRTSFVANPPRLQDPSGFASGSQGGLFSSGFHSGNSVPLGFYALP 214
Query: 91 ----YPERAGQPVCQYYMRTGSCKFGASCKYHHPRQAGGMASPVSLNYYGYPIRPGEKEC 146
+PER GQP CQ+YM+TG CKFG CK+HHPR L+ G P+RPGE C
Sbjct: 215 RENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLC 274
Query: 147 SYYVKTGQCKFSATCKFHHPL 167
+Y + G CKF +CKF HP+
Sbjct: 275 VFYSRYGICKFGPSCKFDHPM 295
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 304 ERPYPPEIQYYSKIGESKLGPSYRYQHQADMNAAPKVNVILSXXXXXXXXXXXXCTHYAQ 363
ERP PE Q+Y K G+ K G ++ H D P + +LS C Y++
Sbjct: 221 ERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPP-DCVLSSVGLPLRPGEPLCVFYSR 279
Query: 364 RGVCKFGPACKFDH 377
G+CKFGP+CKFDH
Sbjct: 280 YGICKFGPSCKFDH 293
>AT2G47850.2 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr2:19595953-19598119 FORWARD LENGTH=442
Length = 442
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 140/329 (42%), Gaps = 18/329 (5%)
Query: 90 DYPERAGQPVCQYYMRTGSCKFGASCKYHHPRQAGGMASPVSLNYYGYPIRPGEKECSYY 149
YPER G P C YYMRTG C +G C+Y+HPR + + V YP R GE C +Y
Sbjct: 41 SYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEATVRATGQ-YPERFGEPPCQFY 99
Query: 150 VKTGQCKFSATCKFHHP---------LPT---GVQIQAXXXXXXXXXXXXXXXXXXYXXX 197
+KTG CKF A+CKFHHP +P G ++
Sbjct: 100 LKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVREPAGTTVPPPPASAPQFYPSVQS 159
Query: 198 XXXXXXXXXXXXXLVARPPLLPGSFVHSPYGPVVVSPTMVPFSGWGPYQXXXXXXXXXXX 257
VAR LLPGS++ YGP++++P +VP GW PY
Sbjct: 160 LMPDQYGGPSSSLRVART-LLPGSYMQGAYGPMLLTPGVVPIPGWSPYSAPVSPALSPGA 218
Query: 258 XXXXXXXXQLYGITHLPSSAAAYTGPYQXXXXXXXXXXXXXXXXXXERPYPPEIQYYSKI 317
LYG+T L S+ + G Y ERP PE QYY K
Sbjct: 219 QHAVGAT-SLYGVTQLTSTTPSLPGVY--PSLSSPTGVIQKEQAFPERPGEPECQYYLKT 275
Query: 318 GESKLGPSYRYQHQADMNAAPKVNVILSXXXXXXXXXXXXCTHYAQRGVCKFGPACKFDH 377
G+ K G S ++ H D P+ N +LS CT Y Q G CKFG CKFDH
Sbjct: 276 GDCKFGTSCKFHHPRD-RVPPRANCVLSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDH 334
Query: 378 XXXXXXXXXXXXXLTDMPVAPYPVGSSIG 406
L D PVAPYPV S +G
Sbjct: 335 PMGTIRYNPSASSLADAPVAPYPVSSLLG 363
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 67/109 (61%), Positives = 84/109 (77%), Gaps = 4/109 (3%)
Query: 32 MWQLGLGGAASDESYPQRPDEADCSYYLRTGFCGFGSRCRFNHPRDRGAVIGAARTAGDY 91
MW+LGLG +SYP+RP DC+YY+RTG CG+G+RCR+NHPRDR +V R G Y
Sbjct: 32 MWRLGLG----SDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEATVRATGQY 87
Query: 92 PERAGQPVCQYYMRTGSCKFGASCKYHHPRQAGGMASPVSLNYYGYPIR 140
PER G+P CQ+Y++TG+CKFGASCK+HHP+ AGG S V LN YGYP+R
Sbjct: 88 PERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVR 136
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 43 DESYPQRPDEADCSYYLRTGFCGFGSRCRFNHPRDRG-AVIGAARTAGDYPERAGQPVCQ 101
++++P+RP E +C YYL+TG C FG+ C+F+HPRDR + P R G C
Sbjct: 257 EQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPGVQRCT 316
Query: 102 YYMRTGSCKFGASCKYHHP 120
+Y++ G CKFG++CK+ HP
Sbjct: 317 FYVQNGFCKFGSTCKFDHP 335
>AT1G04990.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr1:1419368-1421454 REVERSE LENGTH=404
Length = 404
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 145/347 (41%), Gaps = 47/347 (13%)
Query: 33 WQLGLGGAASDESYPQRPDEADCSYYLRTGFCGFGSRCRFNHPRDRGAVIGAARTAGDYP 92
++ G YP RP E DC +YLRTG CG+GS CR+NHP + + + P
Sbjct: 31 MKVNETGVEELNPYPDRPGERDCQFYLRTGLCGYGSSCRYNHPTHLPQDVAYYKE--ELP 88
Query: 93 ERAGQPVCQYYMRTGSCKFGASCKYHHPRQAGGMASPVSLNYYGYPIRPGEKECSYYVKT 152
ER GQP C+Y+++TG+CK+G +CKYHHP+ G A PV N G P+R GEK C YY++T
Sbjct: 89 ERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNG-AQPVMFNVIGLPMRLGEKPCPYYLRT 147
Query: 153 GQCKFSATCKFHHPLPTGVQIQAXXXXXXXXXXXXXXXXXXYXXXXXXXXXXXXXXXXLV 212
G C+F CKFHHP P A ++
Sbjct: 148 GTCRFGVACKFHHPQPDNGHSTAYG-----------------MSSFPAADLRYASGLTMM 190
Query: 213 ARPPLLPGSFVHSPYGPVVVSPT--MVPFSGWGPYQXXXXXXXXXXXXXXXXXXXQLYGI 270
+ LP V Y P++VSP+ +P GW PY +Y +
Sbjct: 191 STYGTLPRPQVPQSYVPILVSPSQGFLPPQGWAPYM---------------AASNSMYNV 235
Query: 271 THLPSSAAAYTGPYQXXXXXXXXXXXXXXXXXXERPYPPEIQYYSKIGESKLGPSYRYQH 330
+ PY E PE +++ G K G +Y H
Sbjct: 236 KN---------QPYYSGSSASMAMAVALNRGLSESSDQPECRFFMNTGTCKYGDDCKYSH 286
Query: 331 QADMNAAPKVNVILSXXXXXXXXXXXXCTHYAQRGVCKFGPACKFDH 377
+ P ++I + C ++ G CKFGP CKFDH
Sbjct: 287 PGVRISQPPPSLI-NPFVLPARPGQPACGNFRSYGFCKFGPNCKFDH 332
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%)
Query: 93 ERAGQPVCQYYMRTGSCKFGASCKYHHPRQAGGMASPVSLNYYGYPIRPGEKECSYYVKT 152
E + QP C+++M TG+CK+G CKY HP P +N + P RPG+ C +
Sbjct: 260 ESSDQPECRFFMNTGTCKYGDDCKYSHPGVRISQPPPSLINPFVLPARPGQPACGNFRSY 319
Query: 153 GQCKFSATCKFHHPL 167
G CKF CKF HP+
Sbjct: 320 GFCKFGPNCKFDHPM 334
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 51 DEADCSYYLRTGFCGFGSRCRFNHPRDRGAVIG----AARTAGDYPERAGQPVCQYYMRT 106
D+ +C +++ TG C +G C+++HP G I + P R GQP C +
Sbjct: 263 DQPECRFFMNTGTCKYGDDCKYSHP---GVRISQPPPSLINPFVLPARPGQPACGNFRSY 319
Query: 107 GSCKFGASCKYHHP 120
G CKFG +CK+ HP
Sbjct: 320 GFCKFGPNCKFDHP 333
>AT1G04990.2 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr1:1419368-1421454 REVERSE LENGTH=404
Length = 404
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 145/347 (41%), Gaps = 47/347 (13%)
Query: 33 WQLGLGGAASDESYPQRPDEADCSYYLRTGFCGFGSRCRFNHPRDRGAVIGAARTAGDYP 92
++ G YP RP E DC +YLRTG CG+GS CR+NHP + + + P
Sbjct: 31 MKVNETGVEELNPYPDRPGERDCQFYLRTGLCGYGSSCRYNHPTHLPQDVAYYKE--ELP 88
Query: 93 ERAGQPVCQYYMRTGSCKFGASCKYHHPRQAGGMASPVSLNYYGYPIRPGEKECSYYVKT 152
ER GQP C+Y+++TG+CK+G +CKYHHP+ G A PV N G P+R GEK C YY++T
Sbjct: 89 ERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNG-AQPVMFNVIGLPMRLGEKPCPYYLRT 147
Query: 153 GQCKFSATCKFHHPLPTGVQIQAXXXXXXXXXXXXXXXXXXYXXXXXXXXXXXXXXXXLV 212
G C+F CKFHHP P A ++
Sbjct: 148 GTCRFGVACKFHHPQPDNGHSTAYG-----------------MSSFPAADLRYASGLTMM 190
Query: 213 ARPPLLPGSFVHSPYGPVVVSPT--MVPFSGWGPYQXXXXXXXXXXXXXXXXXXXQLYGI 270
+ LP V Y P++VSP+ +P GW PY +Y +
Sbjct: 191 STYGTLPRPQVPQSYVPILVSPSQGFLPPQGWAPYM---------------AASNSMYNV 235
Query: 271 THLPSSAAAYTGPYQXXXXXXXXXXXXXXXXXXERPYPPEIQYYSKIGESKLGPSYRYQH 330
+ PY E PE +++ G K G +Y H
Sbjct: 236 KN---------QPYYSGSSASMAMAVALNRGLSESSDQPECRFFMNTGTCKYGDDCKYSH 286
Query: 331 QADMNAAPKVNVILSXXXXXXXXXXXXCTHYAQRGVCKFGPACKFDH 377
+ P ++I + C ++ G CKFGP CKFDH
Sbjct: 287 PGVRISQPPPSLI-NPFVLPARPGQPACGNFRSYGFCKFGPNCKFDH 332
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%)
Query: 93 ERAGQPVCQYYMRTGSCKFGASCKYHHPRQAGGMASPVSLNYYGYPIRPGEKECSYYVKT 152
E + QP C+++M TG+CK+G CKY HP P +N + P RPG+ C +
Sbjct: 260 ESSDQPECRFFMNTGTCKYGDDCKYSHPGVRISQPPPSLINPFVLPARPGQPACGNFRSY 319
Query: 153 GQCKFSATCKFHHPL 167
G CKF CKF HP+
Sbjct: 320 GFCKFGPNCKFDHPM 334
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 51 DEADCSYYLRTGFCGFGSRCRFNHPRDRGAVIG----AARTAGDYPERAGQPVCQYYMRT 106
D+ +C +++ TG C +G C+++HP G I + P R GQP C +
Sbjct: 263 DQPECRFFMNTGTCKYGDDCKYSHP---GVRISQPPPSLINPFVLPARPGQPACGNFRSY 319
Query: 107 GSCKFGASCKYHHP 120
G CKFG +CK+ HP
Sbjct: 320 GFCKFGPNCKFDHP 333
>AT5G63260.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr5:25361900-25364453 FORWARD LENGTH=435
Length = 435
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 82/129 (63%), Gaps = 4/129 (3%)
Query: 46 YPQRPDEADCSYYLRTGFCGFGSRCRFNHPRDRGAVIGAARTAGDYPERAGQPV---CQY 102
YP RPD DCS+Y+RTG C +GS C+FNHP R IG R + E P C+Y
Sbjct: 98 YPVRPDSEDCSFYMRTGSCKYGSSCKFNHPVRRKLQIGRERVR-ERDEDVENPKLMECKY 156
Query: 103 YMRTGSCKFGASCKYHHPRQAGGMASPVSLNYYGYPIRPGEKECSYYVKTGQCKFSATCK 162
Y RTG CK+G SC++ H ++ AS LN+ G PIRPGEKEC +Y++ G CKF + CK
Sbjct: 157 YFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRNGSCKFGSDCK 216
Query: 163 FHHPLPTGV 171
F+HP PT +
Sbjct: 217 FNHPDPTAI 225
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 48/79 (60%)
Query: 90 DYPERAGQPVCQYYMRTGSCKFGASCKYHHPRQAGGMASPVSLNYYGYPIRPGEKECSYY 149
++PER QP C YY++TG CKF CKYHHP+ + S N G P+RP + C++Y
Sbjct: 330 EFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHY 389
Query: 150 VKTGQCKFSATCKFHHPLP 168
+ G CKF C+F H +P
Sbjct: 390 SRYGICKFGPACRFDHSIP 408
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 34 QLGLGGAASDESYPQRPDEADCSYYLRTGFCGFGSRCRFNHPRDRG--AVIGAARTAGDY 91
Q+G + + P +C YY RTG C +G CRF+H ++ A + G
Sbjct: 133 QIGRERVRERDEDVENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLG-L 191
Query: 92 PERAGQPVCQYYMRTGSCKFGASCKYHHPR--QAGGMASPV 130
P R G+ C +YMR GSCKFG+ CK++HP GG+ SP+
Sbjct: 192 PIRPGEKECPFYMRNGSCKFGSDCKFNHPDPTAIGGVDSPL 232
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 304 ERPYPPEIQYYSKIGESKLGPSYRYQHQADMNAAPKVNVI-LSXXXXXXXXXXXXCTHYA 362
ERP PE YY K G+ K +Y H N PK + CTHY+
Sbjct: 333 ERPDQPECTYYLKTGDCKFKYKCKYHHPK--NRLPKQAAFSFNDKGLPLRPDQSMCTHYS 390
Query: 363 QRGVCKFGPACKFDH 377
+ G+CKFGPAC+FDH
Sbjct: 391 RYGICKFGPACRFDH 405
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 30/37 (81%)
Query: 137 YPIRPGEKECSYYVKTGQCKFSATCKFHHPLPTGVQI 173
YP+RP ++CS+Y++TG CK+ ++CKF+HP+ +QI
Sbjct: 98 YPVRPDSEDCSFYMRTGSCKYGSSCKFNHPVRRKLQI 134
>AT3G48440.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr3:17941402-17943576 FORWARD LENGTH=448
Length = 448
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 83/139 (59%), Gaps = 3/139 (2%)
Query: 36 GLGGAASDESYPQRPDEADCSYYLRTGFCGFGSRCRFNHPRDRGAVI---GAARTAGDYP 92
G S+ YP RP DCS+Y+RTG C FGS C+FNHP R I R D
Sbjct: 97 GWSENESENVYPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQIARDNKVREKEDDG 156
Query: 93 ERAGQPVCQYYMRTGSCKFGASCKYHHPRQAGGMASPVSLNYYGYPIRPGEKECSYYVKT 152
+ G C+YY RTG CK+G +C+++H G+AS LN+ G P+RPGE EC YY++
Sbjct: 157 GKLGLIDCKYYFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRPGEVECPYYMRN 216
Query: 153 GQCKFSATCKFHHPLPTGV 171
G CK+ A CKF+HP PT +
Sbjct: 217 GSCKYGAECKFNHPDPTTI 235
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 50/80 (62%)
Query: 88 AGDYPERAGQPVCQYYMRTGSCKFGASCKYHHPRQAGGMASPVSLNYYGYPIRPGEKECS 147
A ++PER QP C YYM+TG CKF +CKYHHP+ P +LN G P+RP + C+
Sbjct: 340 AEEFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQNICT 399
Query: 148 YYVKTGQCKFSATCKFHHPL 167
YY + G CKF C+F H +
Sbjct: 400 YYSRYGICKFGPACRFDHSV 419
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 44 ESYPQRPDEADCSYYLRTGFCGFGSRCRFNHPRDRGAVIGA-ARTAGDYPERAGQPVCQY 102
E +P+RPD+ +CSYY++TG C F C+++HP++R + A P R Q +C Y
Sbjct: 341 EEFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQNICTY 400
Query: 103 YMRTGSCKFGASCKYHHPRQ 122
Y R G CKFG +C++ H Q
Sbjct: 401 YSRYGICKFGPACRFDHSVQ 420
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 30/37 (81%)
Query: 137 YPIRPGEKECSYYVKTGQCKFSATCKFHHPLPTGVQI 173
YP+RPG ++CS+Y++TG CKF ++CKF+HPL QI
Sbjct: 107 YPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQI 143
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 304 ERPYPPEIQYYSKIGESKLGPSYRYQHQADMNAAPKVN-VILSXXXXXXXXXXXXCTHYA 362
ERP PE YY K G+ K + +Y H N PK+ L+ CT+Y+
Sbjct: 345 ERPDQPECSYYMKTGDCKFKFNCKYHHPK--NRLPKLPPYALNDKGLPLRPDQNICTYYS 402
Query: 363 QRGVCKFGPACKFDH 377
+ G+CKFGPAC+FDH
Sbjct: 403 RYGICKFGPACRFDH 417
>AT3G12680.1 | Symbols: HUA1 | floral homeotic protein (HUA1) |
chr3:4025276-4028999 REVERSE LENGTH=524
Length = 524
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 91/159 (57%), Gaps = 28/159 (17%)
Query: 43 DESYPQRPDEADCSYYLRTGFCGFGSRCRFNHPRDRGAVIGAARTAGDYPERAGQPVCQY 102
+E YP+RP E DC YY++T C +GS+C+FNHPR+ AV + T PER +P+C +
Sbjct: 219 NEEYPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAV--SVETQDSLPERPSEPMCTF 276
Query: 103 YMRTGSCKFGASCKYHHPRQ------AGGMASPVSL--------------------NYYG 136
YM+TG CKFG SCK+HHP+ + + S V L N G
Sbjct: 277 YMKTGKCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPDATNNPHVTFTPALYHNSKG 336
Query: 137 YPIRPGEKECSYYVKTGQCKFSATCKFHHPLPTGVQIQA 175
P+R GE +C +Y+KTG CK+ ATC+++HP T QA
Sbjct: 337 LPVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQA 375
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 81/137 (59%), Gaps = 13/137 (9%)
Query: 46 YPQRPDEADCSYYLRTGFCGFGSRCRFNHP--RDRGAVIGAART----AGDYPERAGQPV 99
YPQR E DC++Y++T C FG CRF+HP G + +YPER G+P
Sbjct: 171 YPQRAGEKDCTHYMQTRTCKFGESCRFDHPIWVPEGGIPDWKEAPVVPNEEYPERPGEPD 230
Query: 100 CQYYMRTGSCKFGASCKYHHPRQAGGMASPVSLNYYGYPIRPGEKECSYYVKTGQCKFSA 159
C YY++T CK+G+ CK++HPR+ ++ + P RP E C++Y+KTG+CKF
Sbjct: 231 CPYYIKTQRCKYGSKCKFNHPREEAAVSVETQDS---LPERPSEPMCTFYMKTGKCKFGL 287
Query: 160 TCKFHHP----LPTGVQ 172
+CKFHHP LP+ Q
Sbjct: 288 SCKFHHPKDIQLPSSSQ 304
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 81/172 (47%), Gaps = 44/172 (25%)
Query: 47 PQRPDEADCSYYLRTGFCGFGSRCRFNHPRDRGAVIGAAR-------------------- 86
P R E DC +YL+TG C +G+ CR+NHP +R A I A
Sbjct: 338 PVRSGEVDCPFYLKTGSCKYGATCRYNHP-ERTAFIPQAAGVNYSLVSSNTANLNLGLVT 396
Query: 87 ----------------TAGDYPERAGQPVCQYYMRTGSCKFGASCKYHHPRQ---AGGMA 127
+ YP+R GQ C YYM+TG CKFG CK+HHP A
Sbjct: 397 PATSFYQTLTQPTLGVISATYPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQ 456
Query: 128 SP----VSLNYYGYPIRPGEKECSYYVKTGQCKFSATCKFHHPLPTGVQIQA 175
+P V L+ GYP R G C YY+KTG CK+ ATCKF HP P V +
Sbjct: 457 APQQPNVKLSLAGYPRREGALNCPYYMKTGTCKYGATCKFDHPPPGEVMAKT 508
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 86/186 (46%), Gaps = 61/186 (32%)
Query: 42 SDESYPQRPDEADCSYYLRTGFCGFGSRCRFNHPRDR---------GAVIGAA------- 85
+ +S P+RP E C++Y++TG C FG C+F+HP+D G+ +G
Sbjct: 261 TQDSLPERPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPDATN 320
Query: 86 -----------RTAGDYPERAGQPVCQYYMRTGSCKFGASCKYHHPRQAGGMASPVSLNY 134
+ P R+G+ C +Y++TGSCK+GA+C+Y+HP + + +NY
Sbjct: 321 NPHVTFTPALYHNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAAGVNY 380
Query: 135 ----------------------------------YGYPIRPGEKECSYYVKTGQCKFSAT 160
YP RPG+ EC YY+KTG+CKF
Sbjct: 381 SLVSSNTANLNLGLVTPATSFYQTLTQPTLGVISATYPQRPGQSECDYYMKTGECKFGER 440
Query: 161 CKFHHP 166
CKFHHP
Sbjct: 441 CKFHHP 446
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 57/95 (60%), Gaps = 8/95 (8%)
Query: 45 SYPQRPDEADCSYYLRTGFCGFGSRCRFNHPRDRGAVI--------GAARTAGDYPERAG 96
+YPQRP +++C YY++TG C FG RC+F+HP DR + + + YP R G
Sbjct: 416 TYPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREG 475
Query: 97 QPVCQYYMRTGSCKFGASCKYHHPRQAGGMASPVS 131
C YYM+TG+CK+GA+CK+ HP MA S
Sbjct: 476 ALNCPYYMKTGTCKYGATCKFDHPPPGEVMAKTTS 510
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 304 ERPYPPEIQYYSKIGESKLGPSYRYQHQAD------MNAAPKVNVILSXXXXXXXXXXXX 357
+RP E YY K GE K G ++ H AD A + NV LS
Sbjct: 419 QRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGALN 478
Query: 358 CTHYAQRGVCKFGPACKFDH 377
C +Y + G CK+G CKFDH
Sbjct: 479 CPYYMKTGTCKYGATCKFDH 498
>AT5G63260.2 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr5:25361900-25364453 FORWARD LENGTH=451
Length = 451
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 84/144 (58%), Gaps = 18/144 (12%)
Query: 46 YPQRPDEADCSYYLRTGFCGFGSRCRFNHPRDRG----AVIGAARTAG-----------D 90
YP RPD DCS+Y+RTG C +GS C+FNHP R +G+ RT +
Sbjct: 98 YPVRPDSEDCSFYMRTGSCKYGSSCKFNHPVRRKLQDLKFLGSMRTRNGKEYIGRERVRE 157
Query: 91 YPERAGQPV---CQYYMRTGSCKFGASCKYHHPRQAGGMASPVSLNYYGYPIRPGEKECS 147
E P C+YY RTG CK+G SC++ H ++ AS LN+ G PIRPGEKEC
Sbjct: 158 RDEDVENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECP 217
Query: 148 YYVKTGQCKFSATCKFHHPLPTGV 171
+Y++ G CKF + CKF+HP PT +
Sbjct: 218 FYMRNGSCKFGSDCKFNHPDPTAI 241
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 48/79 (60%)
Query: 90 DYPERAGQPVCQYYMRTGSCKFGASCKYHHPRQAGGMASPVSLNYYGYPIRPGEKECSYY 149
++PER QP C YY++TG CKF CKYHHP+ + S N G P+RP + C++Y
Sbjct: 346 EFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHY 405
Query: 150 VKTGQCKFSATCKFHHPLP 168
+ G CKF C+F H +P
Sbjct: 406 SRYGICKFGPACRFDHSIP 424
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 304 ERPYPPEIQYYSKIGESKLGPSYRYQHQADMNAAPKVNVI-LSXXXXXXXXXXXXCTHYA 362
ERP PE YY K G+ K +Y H N PK + CTHY+
Sbjct: 349 ERPDQPECTYYLKTGDCKFKYKCKYHHPK--NRLPKQAAFSFNDKGLPLRPDQSMCTHYS 406
Query: 363 QRGVCKFGPACKFDH 377
+ G+CKFGPAC+FDH
Sbjct: 407 RYGICKFGPACRFDH 421
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 29/36 (80%)
Query: 137 YPIRPGEKECSYYVKTGQCKFSATCKFHHPLPTGVQ 172
YP+RP ++CS+Y++TG CK+ ++CKF+HP+ +Q
Sbjct: 98 YPVRPDSEDCSFYMRTGSCKYGSSCKFNHPVRRKLQ 133
>AT2G32930.1 | Symbols: ZFN2 | zinc finger nuclease 2 |
chr2:13965990-13968419 REVERSE LENGTH=453
Length = 453
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 77/123 (62%), Gaps = 6/123 (4%)
Query: 46 YPQRPDEADCSYYLRTGFCGFGSRCRFNHPRDRGAVIGAARTAGDYPERAGQPVCQYYMR 105
YP RP E DC ++LRTG CG+G+ CR+NHP G PER GQP C+
Sbjct: 41 YPDRPGERDCQFFLRTGQCGYGNSCRYNHPL-TNLPQGIIYYRDQLPERVGQPDCE---- 95
Query: 106 TGSCKFGASCKYHHPRQAGGMASPVSLNYYGYPIRPGEKECSYYVKTGQCKFSATCKFHH 165
TG+CK+G +CKYHHP+ G A PV N G P+R GEK C YY++TG C+F CKFHH
Sbjct: 96 TGACKYGPTCKYHHPKDRNG-AGPVLFNVLGLPMRQGEKPCPYYMQTGLCRFGVACKFHH 154
Query: 166 PLP 168
P P
Sbjct: 155 PHP 157
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 91 YPERAGQPVCQYYMRTGSCKFGASCKYHHPRQAGGMASPVSLNYYGYPIRPGEKECSYYV 150
+ ERA C+++M TG+CK+G CKY HP++ + P LN P RPG+ C +
Sbjct: 261 FSERA---ECRFFMNTGTCKYGDDCKYSHPKERLLQSPPTLLNPIVLPARPGQPACGNFK 317
Query: 151 KTGQCKFSATCKFHHPL 167
G CKF A CKF H +
Sbjct: 318 AYGFCKFGANCKFDHSM 334
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 51 DEADCSYYLRTGFCGFGSRCRFNHPRDRGAVIGAARTAGD---YPERAGQPVCQYYMRTG 107
+ A+C +++ TG C +G C+++HP++R ++ + T + P R GQP C + G
Sbjct: 263 ERAECRFFMNTGTCKYGDDCKYSHPKER--LLQSPPTLLNPIVLPARPGQPACGNFKAYG 320
Query: 108 SCKFGASCKYHH 119
CKFGA+CK+ H
Sbjct: 321 FCKFGANCKFDH 332
>AT2G32930.2 | Symbols: ZFN2 | zinc finger nuclease 2 |
chr2:13965814-13968419 REVERSE LENGTH=467
Length = 467
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 77/123 (62%), Gaps = 6/123 (4%)
Query: 46 YPQRPDEADCSYYLRTGFCGFGSRCRFNHPRDRGAVIGAARTAGDYPERAGQPVCQYYMR 105
YP RP E DC ++LRTG CG+G+ CR+NHP G PER GQP C+
Sbjct: 41 YPDRPGERDCQFFLRTGQCGYGNSCRYNHPL-TNLPQGIIYYRDQLPERVGQPDCE---- 95
Query: 106 TGSCKFGASCKYHHPRQAGGMASPVSLNYYGYPIRPGEKECSYYVKTGQCKFSATCKFHH 165
TG+CK+G +CKYHHP+ G A PV N G P+R GEK C YY++TG C+F CKFHH
Sbjct: 96 TGACKYGPTCKYHHPKDRNG-AGPVLFNVLGLPMRQGEKPCPYYMQTGLCRFGVACKFHH 154
Query: 166 PLP 168
P P
Sbjct: 155 PHP 157
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 91 YPERAGQPVCQYYMRTGSCKFGASCKYHHPRQAGGMASPVSLNYYGYPIRPGEKECSYYV 150
+ ERA C+++M TG+CK+G CKY HP++ + P LN P RPG+ C +
Sbjct: 261 FSERA---ECRFFMNTGTCKYGDDCKYSHPKERLLQSPPTLLNPIVLPARPGQPACGNFK 317
Query: 151 KTGQCKFSATCKFHHPL 167
G CKF A CKF H +
Sbjct: 318 AYGFCKFGANCKFDHSM 334
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 51 DEADCSYYLRTGFCGFGSRCRFNHPRDRGAVIGAARTAGD---YPERAGQPVCQYYMRTG 107
+ A+C +++ TG C +G C+++HP++R ++ + T + P R GQP C + G
Sbjct: 263 ERAECRFFMNTGTCKYGDDCKYSHPKER--LLQSPPTLLNPIVLPARPGQPACGNFKAYG 320
Query: 108 SCKFGASCKYHH 119
CKFGA+CK+ H
Sbjct: 321 FCKFGANCKFDH 332
>AT1G48195.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr1:17796349-17796597 FORWARD LENGTH=82
Length = 82
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 46/75 (61%)
Query: 91 YPERAGQPVCQYYMRTGSCKFGASCKYHHPRQAGGMASPVSLNYYGYPIRPGEKECSYYV 150
+PER G+P C YY+RTG+C +CKYHHP+ +LN G P+RPG+ C +Y
Sbjct: 6 FPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAICPHYS 65
Query: 151 KTGQCKFSATCKFHH 165
+ G C+ TCKF H
Sbjct: 66 RFGICRSGPTCKFDH 80
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 42 SDESYPQRPDEADCSYYLRTGFCGFGSRCRFNHPRDRG-AVIGAARTAGDYPERAGQPVC 100
S+E +P+RP E +CSYYLRTG C C+++HP++ + P R GQ +C
Sbjct: 2 SEEKFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAIC 61
Query: 101 QYYMRTGSCKFGASCKYHH 119
+Y R G C+ G +CK+ H
Sbjct: 62 PHYSRFGICRSGPTCKFDH 80
>AT1G29570.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr1:10335910-10337854 FORWARD LENGTH=321
Length = 321
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 26/30 (86%)
Query: 137 YPIRPGEKECSYYVKTGQCKFSATCKFHHP 166
YP+RPG+K+C +Y+K G C++ ++C+F+HP
Sbjct: 52 YPVRPGKKDCQFYLKNGLCRYRSSCRFNHP 81
>AT1G29600.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr1:10344046-10346243 FORWARD LENGTH=389
Length = 389
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 14/86 (16%)
Query: 45 SYPQRPDEADCSYYLRTGFCGFGSRCRFNHPRDRGAVIGAARTAGDYPERAGQPVCQYYM 104
+YP RP E +C +Y++ C +GS C +NHP + P R G+ +
Sbjct: 127 AYPVRPGEDNCLFYMKNHLCEWGSECCYNHP-----------PLQEIPCRIGKKL---DC 172
Query: 105 RTGSCKFGASCKYHHPRQAGGMASPV 130
+ G+CK G++C ++HP++ G + P+
Sbjct: 173 KAGACKRGSNCPFNHPKERDGDSLPM 198