Miyakogusa Predicted Gene
- Lj6g3v1931750.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1931750.1 Non Chatacterized Hit- tr|B9SU07|B9SU07_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,37.91,9e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
Mitochondrial termination factor repeats,Mitochodri,CUFF.60221.1
(385 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G07900.1 | Symbols: | Mitochondrial transcription terminatio... 248 7e-66
AT1G21150.1 | Symbols: | Mitochondrial transcription terminatio... 199 2e-51
AT1G61980.1 | Symbols: | Mitochondrial transcription terminatio... 163 2e-40
AT1G62120.1 | Symbols: | Mitochondrial transcription terminatio... 160 2e-39
AT1G61990.1 | Symbols: | Mitochondrial transcription terminatio... 153 2e-37
AT1G61970.2 | Symbols: | Mitochondrial transcription terminatio... 151 7e-37
AT1G61970.1 | Symbols: | Mitochondrial transcription terminatio... 151 7e-37
AT3G46950.1 | Symbols: | Mitochondrial transcription terminatio... 146 2e-35
AT1G62085.1 | Symbols: | Mitochondrial transcription terminatio... 146 3e-35
AT5G23930.1 | Symbols: | Mitochondrial transcription terminatio... 143 2e-34
AT1G62150.1 | Symbols: | Mitochondrial transcription terminatio... 140 2e-33
AT1G62110.1 | Symbols: | Mitochondrial transcription terminatio... 134 7e-32
AT1G61960.1 | Symbols: | Mitochondrial transcription terminatio... 129 3e-30
AT1G62010.1 | Symbols: | Mitochondrial transcription terminatio... 126 2e-29
AT5G64950.1 | Symbols: | Mitochondrial transcription terminatio... 113 2e-25
AT1G56380.1 | Symbols: | Mitochondrial transcription terminatio... 106 3e-23
AT1G56380.2 | Symbols: | Mitochondrial transcription terminatio... 105 4e-23
AT1G62490.1 | Symbols: | Mitochondrial transcription terminatio... 92 5e-19
AT1G79220.1 | Symbols: | Mitochondrial transcription terminatio... 74 2e-13
AT5G54180.1 | Symbols: PTAC15 | plastid transcriptionally active... 48 9e-06
AT4G38160.3 | Symbols: pde191 | Mitochondrial transcription term... 48 9e-06
>AT5G07900.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr5:2520188-2521405 FORWARD
LENGTH=405
Length = 405
Score = 248 bits (632), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 131/337 (38%), Positives = 210/337 (62%), Gaps = 11/337 (3%)
Query: 33 EQHSFTTNYLINNLAFSPETASSISTRVRLDNSEKPDSVLALFRTHGFTNHQLSQIIRTR 92
++ SFT NYLI++ SP++A+ S ++ LD+ E+P++VL L R HGFT Q+S +++ R
Sbjct: 66 QKLSFTLNYLIDSCGLSPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKR 125
Query: 93 PLFLSSDPNTAILPKFNFLLSKGASTSDLVEIITKDPWLMHYSLENAITPCYDFLKRYLV 152
P+ L ++ + +LPK +F LS G S S L + DP ++ SL N + P Y+FLK L
Sbjct: 126 PVLLLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLD 185
Query: 153 SDESTIEAIKSCTGLIYSKHPEK---NIQTLLENGVPESQVPILLCR--SGYLLKRHDPS 207
SDE + A++ T + H + NI + E GVPE + +LL + K H
Sbjct: 186 SDEKIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNH--- 242
Query: 208 DFKKAVEEVKEMGFDPNKKFFIVALNAKTMKV--SLWERKIDLYKKWGWSEEIVVSVFKR 265
+F+ ++ +EMGF+P K F++A++A + K S+W++ ++Y++WGWSE+ ++ FK+
Sbjct: 243 EFQAIAKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKK 302
Query: 266 YPWCMLASEKKIETVMEFWVNQMGWDSLVLAKHPVLLWISLEKIIIPRAFLLQSLQSRGL 325
+P CM+ SE+KI ME++VN+M +A+ PV+L+ SLEK IIPR + + L S GL
Sbjct: 303 HPHCMMLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGL 362
Query: 326 IKDAKSPAAFKVP-EKMFLQKFVNCFEEESAQLLELY 361
+K+ S + VP EK+FL+K V +EEE +L+ LY
Sbjct: 363 VKEDWSLTSLLVPVEKVFLEKLVIKYEEELPELMNLY 399
>AT1G21150.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:7406406-7407578 REVERSE
LENGTH=390
Length = 390
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/331 (36%), Positives = 183/331 (55%), Gaps = 7/331 (2%)
Query: 35 HSFTTNYLINNLAFSPETASSISTRVRLDNSEKPDSVLALFRTHGFTNHQLSQIIRTRPL 94
SFT +YL+++ S E+A S S V+L +S+KPDSVLALF+ HGFTN Q++ +I++ P
Sbjct: 55 ESFTVSYLVDSCGLSLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPR 114
Query: 95 FLSSDPNTAILPKFNFLLSKGASTSDLVEIITKDPWLMHYSLENAITPCYDFLKRYLVSD 154
LS P I PK F S G STSD ++I+ P ++ YSL + PCYD LK LV +
Sbjct: 115 VLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEE 174
Query: 155 ESTIEAIK---SCTGLIYSKHPEKNIQTLLENGVPESQVPILLCRSGYLLKRHDPSDFKK 211
ES ++ +K C L + + E GVP+ + L+ S + + F +
Sbjct: 175 ESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRE-RRFNE 233
Query: 212 AVEEVKEMGFDPNKKFFIVALNA-KTMKVSLWERKIDLYKKWGWSEEIVVSVFKRYPWCM 270
+ V GFDP K F+ A+ A S ERK L++ +GWS+E V+ R+P C+
Sbjct: 234 VLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCV 293
Query: 271 LASEKKIETVMEFWVNQMGWDSLVLAKHPVLLWISLEKIIIPRAFLLQSLQSRGLIK--D 328
S++KI +E+ VN +G + + PV+L +S+EK I PR ++ L S+GL+K D
Sbjct: 294 TVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKED 353
Query: 329 AKSPAAFKVPEKMFLQKFVNCFEEESAQLLE 359
K+ F+ KFV +++E QL++
Sbjct: 354 INYFTILKLKSSEFMDKFVLKYQDEMPQLVQ 384
>AT1G61980.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22908162-22909418 FORWARD
LENGTH=418
Length = 418
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/372 (31%), Positives = 191/372 (51%), Gaps = 52/372 (13%)
Query: 36 SFTTNYLINNLAFSPETASSISTRVRLDNSEKPDSVLALFRTHGFTNHQLSQIIRTRPLF 95
SFT +YL+++L + A S+S +V ++ + PDSVL L R+HGFT+ Q+S I+ P
Sbjct: 52 SFTVSYLVDSLGLPKKLAESVSRKVSFEDKDNPDSVLNLLRSHGFTDSQISTIVTDYPQL 111
Query: 96 LSSDPNTAILPKFNFLLSKGASTSDLVEIITKDPWLMHYSLENAITPCYDFLKRYLVSDE 155
L +D ++ PK FL S+GAS+S+L EI++ P ++ I+ YDF+K L+
Sbjct: 112 LVADAEKSLAPKLQFLQSRGASSSELTEIVSTVPKILGKRGHKTISVFYDFIKETLLDKS 171
Query: 156 STIEAIKSCTGLIYSKHPEK--NIQTLLENGVPESQV-PILL-CRSGYLLKRHDPSDFKK 211
S E KSC K N+ L E G+P + P+L+ C K F++
Sbjct: 172 SKSE--KSCQPFPQGNLENKIRNLSVLRELGMPHKLLFPLLISCDVPVFGKEK----FEE 225
Query: 212 AVEEVKEMGFDPNKKFFIVALN-AKTMKVSLWERKIDLYKKWGWSEEIVVSVFKRYPWCM 270
++++V EMGFDP+ F+ AL + + E K++ YK+ G+ E V +VFKR+P +
Sbjct: 226 SLKKVVEMGFDPSTSKFVEALCVVQRLSDKNIEDKVNAYKRLGFDVEYVWTVFKRWPNFL 285
Query: 271 LASEKK----IETVM-------------------------------EFWVNQMGWDSLVL 295
SEKK IET + EF V +M W L
Sbjct: 286 THSEKKILNTIETFLGLGFSRDEFSVLIKRFPQGIGLSAEMVKKKTEFLVKKMNWPLKAL 345
Query: 296 AKHPVLLWISLEKIIIPRAFLLQSLQSRGLIKDAKSPA---AFKVPEKMFLQKFVNCFEE 352
+P +L SLEK +PR ++Q+L S+GLI ++ P+ F +++FL ++V E+
Sbjct: 346 VSNPAVLGYSLEKRTVPRGNVVQALISKGLI-GSELPSISRVFVCTDQVFLNRYVKRHED 404
Query: 353 ES--AQLLELYK 362
+ +L+ +Y+
Sbjct: 405 KQLETELMAIYR 416
>AT1G62120.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22960326-22961639 REVERSE
LENGTH=437
Length = 437
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 192/374 (51%), Gaps = 54/374 (14%)
Query: 35 HSFTTNYLINNLAFSPETASSISTRVRLDNSEKPDSVLALFRTHGFTNHQLSQIIRTRPL 94
H+FT +YL+++L + + A SIS +V DN PDSVL+L R+HGFT+ Q+S IIRT P
Sbjct: 55 HNFTVSYLVDSLGLATKVAESISMKVSFDNKGNPDSVLSLLRSHGFTDSQISNIIRTFPR 114
Query: 95 FLSSDPNTAILPKFNFLLSKGASTSDLVEIITKDPWLMHYSLENAITPCYDFLKRYLVSD 154
L D ++ PK FL S GAS+S+L E ++ P ++ +++ YDF+K + +D
Sbjct: 115 LLILDAEKSLAPKLQFLQSIGASSSELTETVSAVPKILGKRKGKSLSRYYDFVKVIIEAD 174
Query: 155 ESTIEAIKSCTGLIYSKHPEKNIQTLL---ENGVPESQV-PILLCRSGYLLKRHDPSDFK 210
+S+ + K C L E I+ LL E GVP+ + +L+ +G + + FK
Sbjct: 175 KSS-KLEKLCHSLPEGSKQENKIRNLLVLREMGVPQRLLFSLLISDAGDVCGKE---KFK 230
Query: 211 KAVEEVKEMGFDPNKKFFIVALNAKTMKVSLWERKID------------------LYKKW 252
+++++ E+GFDP F+ ALN + L ++ I+ ++KKW
Sbjct: 231 ESLKKAVEIGFDPTTATFVKALN---VLYGLSDKGIENKFNACKRLGLAVDDVWAMFKKW 287
Query: 253 ---------------------GWSEEIVVSVFKRYPWCMLASEKKIETVMEFWVNQMGWD 291
G+S + + + KR+P C+ S + ++T EF V +M W
Sbjct: 288 PNILTKSEKKIENSVETFLGLGFSRDEFLMMVKRFPQCIGYSTELMKTKTEFLVTEMNWP 347
Query: 292 SLVLAKHPVLLWISLEKIIIPRAFLLQSLQSRGLIKDAKSP--AAFKVPEKMFLQKFVNC 349
+A P +L SLEK +PR +++ L S+GL++ P + ++FL +V
Sbjct: 348 LKAVASIPQVLGYSLEKRTVPRCNVIKVLISKGLLESELPPISSVLTSTSEVFLYMYVRK 407
Query: 350 FEEES--AQLLELY 361
+++ A+L+ ++
Sbjct: 408 HDDKQLVAELMAIF 421
>AT1G61990.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22911453-22912697 FORWARD
LENGTH=414
Length = 414
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 190/368 (51%), Gaps = 53/368 (14%)
Query: 36 SFTTNYLINNLAFSPETASSISTRVRLDNSEKPDSVLALFRTHGFTNHQLSQIIRTRPLF 95
+FT +YL+++L S + A SIS +V ++ PDSVL+LFR++GFT+ Q+S II PL
Sbjct: 52 NFTVSYLVDSLGLSKKLAESISRKVSFEDKVNPDSVLSLFRSYGFTDSQISTIITDYPLL 111
Query: 96 LSSDPNTAILPKFNFLLSKGASTSDLVEIITKDPWLMHYSLENAITPCYDFLKRYLVSD- 154
L +D A+ K L S+GAS+S++ EI++ P ++ + +IT YD +K +V+D
Sbjct: 112 LVADAKKALGRKLQILQSRGASSSEITEIVSTVPRILG---KKSITVYYDAVKDIIVADT 168
Query: 155 ESTIEAIKSCTGLIYSKHPEKNIQTLLENGVPES-QVPILLCRSGYLLKRHDPSDFKKAV 213
S+ E + G + +N+ L E G+P +P+L+ +S + + +F ++
Sbjct: 169 SSSYELPQGSQG-----NKIRNVSALRELGMPSRLLLPLLVSKSQPVCGKE---NFDASL 220
Query: 214 EEVKEMGFDPNKKFFIVALNA-KTMKVSLWERKIDLYKKWGWSEEIVVSVFKRYPWCMLA 272
++V EMGFDP F++AL M E K+ +++ G++ + V +FK+ P +
Sbjct: 221 KKVVEMGFDPTTTKFVLALRMLYQMSEKTIEEKVVVFRSLGFTVDDVWEIFKKTPSVLKV 280
Query: 273 SEKKI----ETVM-------------------------------EFWVNQMGWDSLVLAK 297
S+KKI ET + EF V +M W L
Sbjct: 281 SKKKILKSAETFLDLGYSRAEFLMMVKRYPPCIEYSVESVKKKNEFLVKKMKWPRNALVL 340
Query: 298 HPVLLWISLEKIIIPRAFLLQSLQSRGLI-KDAKSPAAFKV---PEKMFLQKFVNCFEEE 353
HP + S+EK IIPR +L++L S+GL+ K ++ PA V ++ FL ++V E
Sbjct: 341 HPQVFGYSMEKRIIPRCNILEALLSKGLLRKGSELPAVSSVLSCTDEGFLDRYVMKHNEL 400
Query: 354 SAQLLELY 361
L+ ++
Sbjct: 401 VPTLMAIF 408
>AT1G61970.2 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22904713-22905969 FORWARD
LENGTH=418
Length = 418
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 171/353 (48%), Gaps = 44/353 (12%)
Query: 35 HSFTTNYLINNLAFSPETASSISTRVRLDNSEKPDSVLALFRTHGFTNHQLSQIIRTRPL 94
++FT +YL+++L + + A SIS +V ++ PDSVL L +HGFT Q+S IIR P
Sbjct: 51 NNFTVSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQ 110
Query: 95 FLSSDPNTAILPKFNFLLSKGASTSDLVEIITKDPWLMHYSLENAITPCYDFLKRYLVSD 154
L +D ++ PK FL S+GAS+S++ EI++ P ++ I+ YDF+K L+
Sbjct: 111 LLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEK 170
Query: 155 ESTIEAIKSCTGLIYSKHPEK--NIQTLLENGVPESQVPILLCRSGYLLKRHDPSDFKKA 212
S E K C L K N+ L E G+P + LL + + F++
Sbjct: 171 SSKNE--KLCHSLPQGNLENKIRNVSVLRELGMPHKLLFSLLISDSQPVCGKE--KFEET 226
Query: 213 VEEVKEMGFDPNKKFFIVALNA-KTMKVSLWERKIDLYKKWGWSEEIVVSVFKRYPWCML 271
+++V EMGFDP F+ AL M E K+ LYK G+ V S FK++P +
Sbjct: 227 LKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLR 286
Query: 272 ASEKK----IETVM-------------------------------EFWVNQMGWDSLVLA 296
SEKK IET + EF V +M W +
Sbjct: 287 VSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVV 346
Query: 297 KHPVLLWISLEKIIIPRAFLLQSLQSRGLIKDA--KSPAAFKVPEKMFLQKFV 347
+P + SLEK I+PR ++++L S+GL+++ +++FL ++V
Sbjct: 347 SNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYV 399
>AT1G61970.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22904713-22905969 FORWARD
LENGTH=418
Length = 418
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 171/353 (48%), Gaps = 44/353 (12%)
Query: 35 HSFTTNYLINNLAFSPETASSISTRVRLDNSEKPDSVLALFRTHGFTNHQLSQIIRTRPL 94
++FT +YL+++L + + A SIS +V ++ PDSVL L +HGFT Q+S IIR P
Sbjct: 51 NNFTVSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQ 110
Query: 95 FLSSDPNTAILPKFNFLLSKGASTSDLVEIITKDPWLMHYSLENAITPCYDFLKRYLVSD 154
L +D ++ PK FL S+GAS+S++ EI++ P ++ I+ YDF+K L+
Sbjct: 111 LLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEK 170
Query: 155 ESTIEAIKSCTGLIYSKHPEK--NIQTLLENGVPESQVPILLCRSGYLLKRHDPSDFKKA 212
S E K C L K N+ L E G+P + LL + + F++
Sbjct: 171 SSKNE--KLCHSLPQGNLENKIRNVSVLRELGMPHKLLFSLLISDSQPVCGKE--KFEET 226
Query: 213 VEEVKEMGFDPNKKFFIVALNA-KTMKVSLWERKIDLYKKWGWSEEIVVSVFKRYPWCML 271
+++V EMGFDP F+ AL M E K+ LYK G+ V S FK++P +
Sbjct: 227 LKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLR 286
Query: 272 ASEKK----IETVM-------------------------------EFWVNQMGWDSLVLA 296
SEKK IET + EF V +M W +
Sbjct: 287 VSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVV 346
Query: 297 KHPVLLWISLEKIIIPRAFLLQSLQSRGLIKDA--KSPAAFKVPEKMFLQKFV 347
+P + SLEK I+PR ++++L S+GL+++ +++FL ++V
Sbjct: 347 SNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYV 399
>AT3G46950.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr3:17289452-17290804 FORWARD
LENGTH=450
Length = 450
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 195/417 (46%), Gaps = 91/417 (21%)
Query: 30 SSSEQHSFTTNYLINNLAFSPETASSISTRVRLDNSEKPDSVLALFRTHGFTNHQLSQII 89
SS + +FT +YL+ +L + + A +IS +V ++ PDSVL L R++GF + Q+S+II
Sbjct: 46 SSPKGSTFTVSYLVESLGLTKKLAETISKKVTFEDKVNPDSVLNLLRSNGFKDSQISRII 105
Query: 90 RTRPLFLSSDPNTAILPKFNFLLSKGASTSDLVEIITKDPWLMHYSLENAITPCYDFLKR 149
R P L +D ++ PK FL S+GAS+S+++EI++ P ++ E +++ YDF+K
Sbjct: 106 RAYPRLLVTDAEKSLRPKLQFLKSRGASSSEVIEIVSNVPTILDKKGEESVSLYYDFVKD 165
Query: 150 YLVSDESTIEAIKSCTGLIYSKHPEK--NIQTLLENGVPESQVPILLCRSGYLLKRHDP- 206
+ +S C K + NI L E GVP+ + LL + R+ P
Sbjct: 166 IMQDGKSL------CISCPEGKKGNRIRNISVLRELGVPQKLLFSLL------ISRYQPV 213
Query: 207 ---SDFKKAVEEVKEMGFDPNKKFFIVALNA-KTMKVSLWERKIDLYKKWG------WS- 255
F++++++V +MGFDP K F+ AL+ M E K+++YK+ G W+
Sbjct: 214 CGKEKFEESLKKVVDMGFDPAKSKFVEALHVVYEMSEKTIEEKVNVYKRLGFSEAEIWAI 273
Query: 256 ----------------------------EEIVVSVFKRYPWCMLASEKKI---------- 277
EE ++SV K P C+ +SE+KI
Sbjct: 274 FKKWPYFLKFSEKKIILMFETLKKCGLVEEEIISVLKSRPQCIRSSEQKILDSIEMFLGL 333
Query: 278 ----------------------ETV---MEFWVNQMGWDSLVLAKHPVLLWISLEKIIIP 312
ET+ E V M W + P +L SLEK I+P
Sbjct: 334 GFSRDDFKMMVKRYPCCTAYSGETLRKKFEVLVKMMNWPLEAVVMIPTVLGYSLEKRIVP 393
Query: 313 RAFLLQSLQSRGLIKDAKSP--AAFKVPEKMFLQKFVNCFEEESAQLLELYKEKKRS 367
R+ ++++L S+GLI P + ++ FL+++V ++ +L+ ++ + S
Sbjct: 394 RSNVIKALMSKGLIGSENPPISSVLVCTDQEFLKRYVMKHDKLVPKLMAIFNRGRVS 450
>AT1G62085.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22948757-22950142 REVERSE
LENGTH=461
Length = 461
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 174/367 (47%), Gaps = 85/367 (23%)
Query: 36 SFTTNYLINNLAFSPETASSISTRVRLDNSEKPDSVLALFRTHGFTNHQLSQIIRTRPLF 95
SF+ +YL+++L + A SIS +V ++ PDSVL+L R+HGFT+ Q+S II P
Sbjct: 55 SFSVSYLVDSLGLPKKVAESISKKVSFEDKGNPDSVLSLLRSHGFTDSQISSIITDYPQL 114
Query: 96 LSSDPNTAILPKFNFLLSKGASTSDLVEIITKDPWLMHYSLENAITPCYDFLKRYLVSDE 155
L +D +I PK FL S+GAS S+L I++ P ++ + I+ YDF+K + +D+
Sbjct: 115 LVADAEKSIGPKLQFLQSRGASRSELTHIVSTVPEILGKRGDKTISIYYDFVKEIIEADK 174
Query: 156 STIEAIKSCTGLIYSKHPE---KNIQTLLENGVPESQVPILLCRSGYLLKRHDP----SD 208
S+ + K C L E +N+ L E GVP+ + L L+ H P +
Sbjct: 175 SS-KFEKLCHSLPEGSKQENKIRNVLVLRELGVPQRLLFPL------LISDHQPVCGKEN 227
Query: 209 FKKAVEEVKEMGFDPNKKFFIVALNA------KTMKV-------------SLW------- 242
F++++++V EMGFDP F+ AL KT++ +W
Sbjct: 228 FEESLKKVVEMGFDPTTSKFVKALRVVYRFRDKTIEAKVNVCKSLGFSVGDVWAMFKKCP 287
Query: 243 ------ERKI----DLYKKWGWSEEIVVSVFKRYPWCMLASEKKI--------------- 277
E KI + KK G E+ V+SV K++P C+ ASE+KI
Sbjct: 288 SFLNFSENKIVQTWETLKKCGLLEDDVLSVLKKFPQCINASEQKIMNSIETFLGLGFSRD 347
Query: 278 -----------------ETV---MEFWVNQMGWDSLVLAKHPVLLWISLEKIIIPRAFLL 317
ETV EF V +M W + P +L SLEK IPR ++
Sbjct: 348 EVAMIAKRFPQCLILSAETVKKKTEFLVKKMNWPLKAVVSTPAVLGYSLEKRTIPRCNVI 407
Query: 318 QSLQSRG 324
++L S+G
Sbjct: 408 KALMSKG 414
>AT5G23930.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr5:8074625-8075998 REVERSE
LENGTH=457
Length = 457
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 195/425 (45%), Gaps = 104/425 (24%)
Query: 14 NLKTTITRTPSFLQHFSS-------------SEQHSFTTNYLINNLAFSPETASSISTRV 60
NL + + +F + FSS ++ +FT +YLI++L + + A SIS +
Sbjct: 20 NLNLLLQNSSAFTESFSSVVTTTKDLSLEDERKRKTFTVSYLIDSLGLTTKLAESISMKA 79
Query: 61 RLDNSEKPDSVLALFRTHGFTNHQLSQIIRTRPLFLSSDPNTAILPKFNFLLSKGASTSD 120
D PDSVL L R++GF + Q+S II T P FL +P + K +FL GAS+S+
Sbjct: 80 NFDEKGNPDSVLKLLRSYGFKDSQISSIISTYPRFLIENPEKTLRAKLHFLKLNGASSSE 139
Query: 121 LVEIITKDPWLMHYSLENAITPCYDFLKRYLVSDESTIEAIKSCTGLIYSKHPEKNIQTL 180
L EI++K P ++ I+ YD++K L +S+ + K + +N+ L
Sbjct: 140 LTEIVSKVPKILGKRGGKWISHYYDYVKEILQDQDSSSSSSKR-----KQTNRNRNVSVL 194
Query: 181 LENGVPESQVPILLCRSGYLLKRHDP----SDFKKAVEEVKEMGFDPNKKFFIVA----- 231
+ GVP+ +LL L+ R P F+++V+++ EMGFDP F+ A
Sbjct: 195 RKLGVPQR---LLL---NLLISRAKPVCGKERFEESVKKIVEMGFDPKSPKFVNALYVFY 248
Query: 232 -LNAKTM--KVSLWER----------------------------KIDLYKKWGWSEEIVV 260
L+ KT+ KV+ + R K + K+ G ++E V
Sbjct: 249 ELSDKTIEEKVNAYIRLGLSVNEVWAVFKKWPFSLKYSEKNIIQKFETLKRVGLTKEEVC 308
Query: 261 SVFKRYPWCMLASEKKI---------------ETVM--------------------EFWV 285
V K+YP C+ SE+KI E +M EF V
Sbjct: 309 LVVKKYPECVGTSEEKIVKSVKTFLELGFTKDEVLMIIKRHPQCIGLAADSVKKKTEFLV 368
Query: 286 NQMGWDSLVLAKHPVLLWISLEKIIIPRAFLLQSLQSRGLIKDAKSPAAFKV---PEKMF 342
MGW V+A P++L SLEK ++PR ++++L S GLI + PA V P+ F
Sbjct: 369 KTMGWPLKVVASTPIVLGFSLEKFVLPRCNVIKALMSNGLIGEM--PAISSVLTSPKLKF 426
Query: 343 LQKFV 347
L+ FV
Sbjct: 427 LKLFV 431
>AT1G62150.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22970198-22971589 REVERSE
LENGTH=463
Length = 463
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 191/406 (47%), Gaps = 81/406 (19%)
Query: 31 SSEQHSFTTNYLINNLAFSPETASSISTRVRLDNSEKPDSVLALFRTHGFTNHQLSQIIR 90
S + ++FT +YL+++L + + A SIS +V +N PD+VL L R+H FT+ Q+S II
Sbjct: 53 SRKGNNFTVSYLVDSLGLASKLAESISMKVSFENKGNPDTVLNLLRSHEFTDSQISSIIS 112
Query: 91 TRPLFLSSDPNTAILPKFNFLLSKGASTSDLVEIITKDPWLMHYSLENAITPCYDFLKRY 150
P L +D ++ PK + S+GAS+S+L EI++K P ++ + +I YD +K
Sbjct: 113 DYPTLLVADAENSLGPKLLLMQSRGASSSELTEIVSKVPKILGMKGDKSIGRYYDIVKEI 172
Query: 151 LVSDESTIEAIKSCTGLIYSKHPE---KNIQTLLENGVPESQVPILLCRSGYLLKRHDPS 207
+ +D+S+ + K C L E +N+ L + GVP+ + LL + ++ +
Sbjct: 173 IEADKSS-KFEKLCHSLPEGSKQENKIRNVLVLRDLGVPQRLLFSLLFSNHHVCCGKE-- 229
Query: 208 DFKKAVEEVKEMGFDPNKKFFIVAL-------------NAKTMKV------SLWE----- 243
F++++ +V MGFDP F+ AL N K +WE
Sbjct: 230 KFEESLNKVVGMGFDPTTPKFVEALCIVYGLSDKRLEENFNVYKRFGLTVNDVWELFKKC 289
Query: 244 ------------RKIDLYKKWGWSEEIVVSVFKRYPWCMLASEKKI-------------- 277
+ + K+ G E+ V+SVFK+ P C+ ASE++I
Sbjct: 290 PAFLGYSENRIIQTFEALKRCGLCEDEVLSVFKKNPLCLRASEQQILNSMETFIGLGFSR 349
Query: 278 -ETVM--------------------EFWVNQMGWDSLVLAKHPVLLWISLEKIIIPRAFL 316
E VM EF V +M W V+ P +L S+EK +PR +
Sbjct: 350 DEFVMMVKCLPQCIGYSAEMVKKKTEFVVKKMNWPLKVITLFPQVLGYSMEKRTVPRCNV 409
Query: 317 LQSLQSRGLIKDAKSPAA--FKVPEKMFLQKFVNCFEEESAQLLEL 360
+++L S+GL+ P A ++ FL+++V E + +LEL
Sbjct: 410 IKALMSKGLLGSELPPMASVLACTDQTFLKRYV--VEHDEKLVLEL 453
>AT1G62110.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22958094-22959482 REVERSE
LENGTH=462
Length = 462
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 189/392 (48%), Gaps = 84/392 (21%)
Query: 36 SFTTNYLINNLAFSPETASSISTRVRLDNSEKPDSVLALFRTHGFTNHQLSQIIRTRPLF 95
+FT +YL+++L + + A SIS +V N PD VL+LFR++GFTN Q+S II P
Sbjct: 52 NFTVSYLVDSLGLATKLAESISKKVSFVNKGNPDLVLSLFRSYGFTNSQISSIITDYPRL 111
Query: 96 LSSDPNTAILPKFNFLLSKGASTSDLVEIITKDPWLMHYSLENAITPCYDFLKRYLVSDE 155
L D ++ K FL S+GAS+ +L +I++ P ++ ++ YDF+K + +D+
Sbjct: 112 LLIDAEKSLDIKLQFLESRGASSPELTQIVSTVPKILGMKEGKSLGRYYDFVKEIIEADK 171
Query: 156 ST-IEAIKSCTGLIYSKHPE---KNIQTLLENGVPESQVPILLCRSGYLLKRHDPSDFKK 211
S+ E + C L + +N+ L + GVP+ + LL + + +F++
Sbjct: 172 SSKYETL--CQPLPEANRQGNKIRNVSVLRDLGVPQKLLFSLLISDAQPVCGKE--NFEE 227
Query: 212 AVEEVKEMGFDPNKKFFIVALNA------KTM--KVSLW--------------------- 242
++++V EMGFDP F+ AL A KT+ +V+++
Sbjct: 228 SLKKVVEMGFDPTTSKFVQALRAVYRFTDKTIEERVNVYKGFGFAVEDVWAMFKKCPYFL 287
Query: 243 ---ERK----IDLYKKWGWSEEIVVSVFKRYPWCMLASEKKI------------------ 277
E+K I+ KK G E+ V+SV K+YP C+ SE+KI
Sbjct: 288 NSSEKKIGQTIETLKKCGLLEDEVISVLKKYPQCIGTSEQKILNSIEIFLGLGFSRDEFI 347
Query: 278 --------------ETV---MEFWVNQMGWDSLVLAKHPVLLWISLEKIIIPRAFLLQSL 320
ETV +EF V +M W + +P +L +LEK +PR ++++L
Sbjct: 348 TMVKRFPQCLILSAETVKKKIEFVVKKMNWPLKDVVSNPTVLGYNLEKRTVPRCNVIEAL 407
Query: 321 QSRGLIKDAKS-----PAAFKVPEKMFLQKFV 347
S+ L+ D S + +++FL+++V
Sbjct: 408 MSKRLLGDTGSELPPMSSVLVCTDELFLKRYV 439
>AT1G61960.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22902239-22903612 FORWARD
LENGTH=457
Length = 457
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 140/255 (54%), Gaps = 14/255 (5%)
Query: 35 HSFTTNYLINNLAFSPETASSISTRVRLDNSEKPDSVLALFRTHGFTNHQLSQIIRTRPL 94
++FT +YL+++L + + A SIS +V + PDSVL+L ++GFT Q+S II P
Sbjct: 51 NNFTVSYLVDSLGLTTKLAESISKKVSFEERRNPDSVLSLLTSYGFTKSQISSIITIYPR 110
Query: 95 FLSSDPNTAILPKFNFLLSKGASTSDLVEIITKDPWLMHYSLENAITPCYDFLKRYLVSD 154
L+ D +I PK L S+GAS+S+L +I++ P ++ +IT YDF+K + +D
Sbjct: 111 LLALDAEKSIAPKLQSLQSRGASSSELTQIVSTVPKILGKRGHKSITVYYDFVKDIIEAD 170
Query: 155 ESTIEAIKSCTGLIYS------KHPEKNIQTLLENGVPESQVPILLCRSGYLLKRHDPSD 208
+S+ S L +S K+ +NI L E GV + + LL G + +
Sbjct: 171 KSS-----SYEKLCHSFPQGNKKNKIRNISVLRELGVAQRLLFPLLISDGQPVCGKE--R 223
Query: 209 FKKAVEEVKEMGFDPNKKFFIVALNA-KTMKVSLWERKIDLYKKWGWSEEIVVSVFKRYP 267
F++++++V EMGFDP F+ AL M E K+++YK+ G+ V ++FK++P
Sbjct: 224 FEESLKKVVEMGFDPETTKFVEALRVIYRMSDKTIEEKVNVYKRLGFGVADVWAIFKKWP 283
Query: 268 WCMLASEKKIETVME 282
+ SEKKI E
Sbjct: 284 SFLSYSEKKITHTFE 298
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 65/120 (54%), Gaps = 4/120 (3%)
Query: 246 IDLYKKWGWSEEIVVSVFKRYPWCMLASEKKIETVMEFWVNQMGWDSLVLAKHPVLLWIS 305
I+ + G+S + + KRYP C+ + + ++ EF V M W L P + S
Sbjct: 332 IETFLGLGFSRDEFAMMVKRYPQCIDYTAETVKKKTEFIVKNMNWPLEALVSIPQVFGYS 391
Query: 306 LEKIIIPRAFLLQSLQSRGLIKDA-KSPAAFKV---PEKMFLQKFVNCFEEESAQLLELY 361
LEK +PR ++++L S+GL+KD ++P V ++ FL+++V ++ + +L+ ++
Sbjct: 392 LEKRTVPRCNVIKTLISKGLMKDGSEAPPMSSVLTSTDQAFLRRYVMKHDKLAPELMAIF 451
>AT1G62010.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22915886-22917133 FORWARD
LENGTH=415
Length = 415
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 172/351 (49%), Gaps = 52/351 (14%)
Query: 55 SISTRVRLDNSEKPDSVLALFRTHGFTNHQLSQIIRTRPLFLSSDPNTAILPKFNFLLSK 114
S+ +L + DSVL L R++GFT+ Q+S IIR+ L + T++ K FL S+
Sbjct: 57 SLRLATKLTDKGNSDSVLDLLRSYGFTDSQISSIIRSDSRVLIDNDATSLGSKLQFLQSR 116
Query: 115 GASTSDLVEIITKDPWLMHYSLENAITPCYDFLKRYLVSDESTIEAIKSCTGLIYSKHPE 174
GAS+S+L E+++ P ++ +++ YDF+K + +D+S+ + + + +
Sbjct: 117 GASSSELTEVVSTVPKILGKREGKSLSRYYDFIKVIIEADKSS--KYEKISHSLAQGNKI 174
Query: 175 KNIQTLLENGVPESQVPILLCRSGYLLKRHDP----SDFKKAVEEVKEMGFDPNKKFFIV 230
+NI L E GVP+ ++ +LL + + P F ++++V EMGFDP F+
Sbjct: 175 RNILVLRELGVPQKRLLLLL------ISKSQPVCGKEKFDASLKKVVEMGFDPTTSTFVH 228
Query: 231 ALNA-KTMKVSLWERKIDLY--------------KKW---------------------GW 254
AL+ M E KI +Y KKW G+
Sbjct: 229 ALHMLYQMSDKTIEEKIRVYRSVGFSVDDVWAMFKKWPRSLTHSEKKVANSIETFLGLGF 288
Query: 255 SEEIVVSVFKRYPWCMLASEKKIETVMEFWVNQMGWDSLVLAKHPVLLWISLEKIIIPRA 314
S ++ + +FKR+P C+ S + ++ EF V +M W +A P +L SLEK +PR
Sbjct: 289 SRDVFMMMFKRFPPCIGYSTEAVKKKTEFLVKEMNWPVKAVASIPQVLGYSLEKRTVPRC 348
Query: 315 FLLQSLQSRGLIKDAKSP--AAFKVPEKMFLQKFVNCFEEES--AQLLELY 361
+++ L S+GL++ P + + FL +V+ +++ A+L+ ++
Sbjct: 349 NVIKVLMSKGLLESELPPMSSVLTSTSESFLNLYVSKHDDKQLVAELMAIF 399
>AT5G64950.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr5:25953887-25955062 FORWARD
LENGTH=391
Length = 391
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 174/355 (49%), Gaps = 20/355 (5%)
Query: 26 LQHFSSSEQHSFTTN-----YLINNLAFSPETASSISTRV-RLDNSEKPDSVLALFRTHG 79
L HFSS+ + +N +L +N F A +I+ R L + E+P SV+ + +++
Sbjct: 24 LHHFSSNATPASISNPAFVEFLRDN-GFQKPLAIAIAMRYPNLKSLEQPRSVIQMLKSYS 82
Query: 80 FTNHQLSQIIRTRPLFLSSDPNTAILPKFNFLLSKGASTSDLVEIITKDPWLMHYSLENA 139
F++ Q+ + IR P + + + PK F G + S L + ++++ ++ SL
Sbjct: 83 FSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVVGVSLVKK 142
Query: 140 ITPCYDFLKRYLVSDESTIEAIKS-CTGLIYSKHPE----KNIQTLLENGVPESQVPILL 194
+ P + LK + + I S C L+ S+ P NI L G+ SQ+ LL
Sbjct: 143 LIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETCGIVGSQLASLL 202
Query: 195 CRSGYLLKRHDPSDFKKAVEEVKEMGFDPNKKFFIVA-LNAKTMKVSLWERKIDLYKKWG 253
R + + + V ++GF N + + A ++ ++ ++RK+ L+ G
Sbjct: 203 RRQPRIFNLSE-EKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFMANG 261
Query: 254 WSEEIVVSVFKRYPWCMLASEKKIETVMEFWVNQMGWDSLVLAKHPVLLWISLEKIIIPR 313
+SE+ + + +R P + SE K+ EF++ +MG + LAK P +L +LEK +IPR
Sbjct: 262 FSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSYNLEKRVIPR 321
Query: 314 AFLLQSLQSRGLIKDAKSP-----AAFKVPEKMFLQKFVNCFEEESA-QLLELYK 362
+LQ L+ +GL+ + ++ E+ FL+K+V F +E A +LL YK
Sbjct: 322 LKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEIAEELLVAYK 376
>AT1G56380.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:21101374-21102701 FORWARD
LENGTH=388
Length = 388
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 177/364 (48%), Gaps = 51/364 (14%)
Query: 31 SSEQHSFTTNYLINNLAFSPETASSISTRVRLDNSEKPDSVLALFRTHGFTNHQLSQIIR 90
+ ++ T +YL++++ + A SI V + P+SVL L R++ FT+ Q+S II
Sbjct: 11 AQKEPKLTVSYLVDSVGIPIKFAESILKEVSSKDKCNPNSVLNLLRSYDFTDSQISSIIT 70
Query: 91 TRPLFLSSDPNTAILPKFNFLLSKGASTSDLVEIITKDPWLMHYSLENAITPCYDFLKRY 150
T P L D ++ PK FL S+ +S L +I+T+ P ++ E ++ YDF+K
Sbjct: 71 TDPELLMEDAENSLCPKLKFLESREILSSRLNDIVTRVPKILRMEEEKSMITYYDFVKTI 130
Query: 151 LVSDESTIEAIKSCTGLIYSKHPEKNIQTLLENG-------VPESQVPILLCRSGYLLKR 203
++ S + K C Y E +I+ ++E G + ++ V + + L +R
Sbjct: 131 TLTS-SRSDFYKVCELYPYI---ESSIRKVIEMGFDPFAPKIFDATVVVCTLSNETLEER 186
Query: 204 --------HDPSD----FKK--------------AVEEVKEMGFDPNKKFFIVALNAKTM 237
D D FKK + E +K+ G + + + + +
Sbjct: 187 VNIYKTLGFDVRDVWEMFKKCPTFLNISEKKITQSFETLKKCGLVEEEVISMFQKSPQCI 246
Query: 238 KVSLWE--RKIDLYKKWGWSEEIVVSVFKRYPWCMLASEKKIETVMEFWVNQ-MGWDSLV 294
S + + + K G EE V+S+FKRYP C+ SEKKI +E ++ Q D ++
Sbjct: 247 DFSELDITQNFEFLKGCGLVEEEVLSMFKRYPQCIGFSEKKILNAVETFLGQGFSKDEVM 306
Query: 295 LAKH-------PVLLWISLEKIIIPRAFLLQSLQSRGLIKDAKSPAAFKV---PEKMFLQ 344
+ + PV+L S+EK+I+PR ++++L S+ L+K S + F V P+++FL+
Sbjct: 307 MMVNREGVVSIPVVLEFSMEKMIVPRCNVIKALTSKRLLKTEVS-SMFSVLICPDEVFLE 365
Query: 345 KFVN 348
++V+
Sbjct: 366 RYVS 369
>AT1G56380.2 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:21101327-21102701 FORWARD
LENGTH=399
Length = 399
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 177/364 (48%), Gaps = 51/364 (14%)
Query: 31 SSEQHSFTTNYLINNLAFSPETASSISTRVRLDNSEKPDSVLALFRTHGFTNHQLSQIIR 90
+ ++ T +YL++++ + A SI V + P+SVL L R++ FT+ Q+S II
Sbjct: 22 AQKEPKLTVSYLVDSVGIPIKFAESILKEVSSKDKCNPNSVLNLLRSYDFTDSQISSIIT 81
Query: 91 TRPLFLSSDPNTAILPKFNFLLSKGASTSDLVEIITKDPWLMHYSLENAITPCYDFLKRY 150
T P L D ++ PK FL S+ +S L +I+T+ P ++ E ++ YDF+K
Sbjct: 82 TDPELLMEDAENSLCPKLKFLESREILSSRLNDIVTRVPKILRMEEEKSMITYYDFVKTI 141
Query: 151 LVSDESTIEAIKSCTGLIYSKHPEKNIQTLLENG-------VPESQVPILLCRSGYLLKR 203
++ S + K C Y E +I+ ++E G + ++ V + + L +R
Sbjct: 142 TLT-SSRSDFYKVCELYPYI---ESSIRKVIEMGFDPFAPKIFDATVVVCTLSNETLEER 197
Query: 204 --------HDPSD----FKK--------------AVEEVKEMGFDPNKKFFIVALNAKTM 237
D D FKK + E +K+ G + + + + +
Sbjct: 198 VNIYKTLGFDVRDVWEMFKKCPTFLNISEKKITQSFETLKKCGLVEEEVISMFQKSPQCI 257
Query: 238 KVSLWE--RKIDLYKKWGWSEEIVVSVFKRYPWCMLASEKKIETVMEFWVNQ-MGWDSLV 294
S + + + K G EE V+S+FKRYP C+ SEKKI +E ++ Q D ++
Sbjct: 258 DFSELDITQNFEFLKGCGLVEEEVLSMFKRYPQCIGFSEKKILNAVETFLGQGFSKDEVM 317
Query: 295 LAKH-------PVLLWISLEKIIIPRAFLLQSLQSRGLIKDAKSPAAFKV---PEKMFLQ 344
+ + PV+L S+EK+I+PR ++++L S+ L+K S + F V P+++FL+
Sbjct: 318 MMVNREGVVSIPVVLEFSMEKMIVPRCNVIKALTSKRLLKTEVS-SMFSVLICPDEVFLE 376
Query: 345 KFVN 348
++V+
Sbjct: 377 RYVS 380
>AT1G62490.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:23130405-23131533 REVERSE
LENGTH=334
Length = 334
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 127/272 (46%), Gaps = 45/272 (16%)
Query: 13 SNLKTTITRTPSFLQHFSSSEQHSFTTNYLINNLAFSPETASSISTRVRLDNSEKPDSVL 72
SN +T+ + + S + +FT +YL+++L + A SIS + R ++ PDSVL
Sbjct: 75 SNSFSTVASAAADVSLIDSQKGKNFTVSYLVDSLGLPKKLAESISKKFRFEDKANPDSVL 134
Query: 73 ALFRTHGFTNHQLSQIIRTRPLFLSSDPNTAILPKFNFLLSKGASTSDLVEIITKDPWLM 132
+L R+HGFT Q+S +PK L +G T L
Sbjct: 135 SLLRSHGFTVSQIS------------------IPKL--LGKRGHKTLSLY---------- 164
Query: 133 HYSLENAITPCYDFLKRYLVSDEST-IEAIKSCTGLIYSKHPEKNIQTLLENGVPESQVP 191
YDF+K L +D+S+ E + ++ ++N+ L E G+P +
Sbjct: 165 -----------YDFVKESLEADKSSKYETLCQSFPQGNLENKKRNVSVLRELGMPHKLLF 213
Query: 192 ILLCRSGYLLKRHDPSDFKKAVEEVKEMGFDPNKKFFIVALNAK-TMKVSLWERKIDLYK 250
LL G + D F ++++V EMGFDP F+ AL+ M E K+++YK
Sbjct: 214 PLLISVGQPVCGKD--RFNTSLKKVVEMGFDPTTAKFVKALHVSYEMNDKTIEEKVNVYK 271
Query: 251 KWGWSEEIVVSVFKRYPWCMLASEKKIETVME 282
G++ E V +FK++P+ + SE+KI +E
Sbjct: 272 MLGFAVEDVWVIFKKWPYSLKYSEEKITQTIE 303
>AT1G79220.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:29799227-29800426 FORWARD
LENGTH=399
Length = 399
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 142/305 (46%), Gaps = 44/305 (14%)
Query: 72 LALFRTHGFTNHQLSQIIRTRPLFLSSDPNTAILPKFNFLLSKGASTSDLVEIITKDPWL 131
L+L + G T+ L +I+ RP F S + + N+ + S L +I ++P L
Sbjct: 119 LSLLKPLGITSSDLVKILNCRPRFFSC--RLVLDERINYFMEILGSKEVLRRVIIRNPSL 176
Query: 132 MHYSLENAITPCYDFLKRYLVSDESTIEAIKSCTGLIYSKHPEKNIQTLLENGVPESQVP 191
M Y L++ I P ++ K GL +S+ Q L+ + P
Sbjct: 177 MLYDLDDKIKPAIEYYK-----------------GLGFSQ------QDLVAMLISR---P 210
Query: 192 ILLCRSGYLLKRHDPSDFKKAVEEVKEMGFDPNKKFF-IVALNAKTMKVSLWERKIDLYK 250
L+ R+ + + E +++ G K F VA+ ++ E K+ +
Sbjct: 211 TLIPRTNF---------NNEKFEYIEKTGVTRESKMFKYVAVIIGVSRMETIEEKVRNLE 261
Query: 251 KWGWSEEIVVSVFKRYPWCMLASEKKIETVMEFWVNQMGWDSLVLAKHPVLLWISLEKII 310
K+G+SEE + ++ + P + S +K++ M F + M + + KHP LL ++LE +
Sbjct: 262 KFGFSEEEIWHLYGKCPILLSLSVEKVQRNMTFVIASMKLPAHSVVKHPCLLLLNLESRL 321
Query: 311 IPRAFLLQ---SLQSRGLIKDAKSPAAFKVPEKMFLQKFVNCFEEESA-QLLELYKEKKR 366
PRA L++ ++ + LIK+ A ++ EK FL+ +V C ++ A +L+E Y++ K
Sbjct: 322 KPRADLVKRVLEMRLKPLIKEVSIFRAVRMSEKRFLKVYVMCHPQDIATELMEFYEKSKN 381
Query: 367 SCMKR 371
MKR
Sbjct: 382 --MKR 384
>AT5G54180.1 | Symbols: PTAC15 | plastid transcriptionally active 15
| chr5:21988544-21990183 FORWARD LENGTH=500
Length = 500
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 112/243 (46%), Gaps = 10/243 (4%)
Query: 88 IIRTRPLFLSSDPNTAILPKFNFLLS-KGASTSDLVEIITKDPWLMHYSLENAITPCYDF 146
II RP+ L+SD ++ ++P+ +F+ + G ++ + P ++ YS+E+ + +F
Sbjct: 234 IIARRPVILNSDLDSQLIPRVDFIRNLSGEDDFATGTVLRRLPAILSYSVEH-MNGQVEF 292
Query: 147 LKRYL-VSDESTIEAIKSCTGLIYSKHPEK---NIQTLLENGVPESQVPILLCRSGYLLK 202
LK + ++ E + + +I + K I+ L E G + L ++ +L
Sbjct: 293 LKSFAGLTSEQVFKIVHVFPNVISTSKERKLRPRIEFLKECGFDSPGMFKFLSKAPLILA 352
Query: 203 RHDPSDFKKAVEEVKEMGFDPNKKFFIVALNAKTMKVS-LWERKIDLYKKWGWSEEIVVS 261
+ ++ + + ++G+ K A+ A T S +R I LY +G S E +++
Sbjct: 353 LSE-NNLSHKLGFLVKIGYKHRTKELAFAMGAVTRTSSDNMQRVIGLYLSYGLSFEDILA 411
Query: 262 VFKRYPWCMLASEKKIETVMEFWVNQMGWDSLVLAKHPVLLWISLEKIIIPRAFLLQSLQ 321
+ ++P + + +E +E+ + MG + L P L L+ I R + L+
Sbjct: 412 MSTKHPQVLQYNYTSLEEKLEYLIEYMGREVEELLAFPAFLGYKLDSRIKHR--YEEKLK 469
Query: 322 SRG 324
SRG
Sbjct: 470 SRG 472
>AT4G38160.3 | Symbols: pde191 | Mitochondrial transcription
termination factor family protein |
chr4:17902412-17903904 FORWARD LENGTH=378
Length = 378
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 7/139 (5%)
Query: 66 EKPDSVLALFRTHGFTNHQLSQIIRTRPLFLSSDPNTAILPKFNFLLSKGASTSDLV-EI 124
EK +LA F+ G QL ++I P +S +T + +FL S G ++ ++
Sbjct: 112 EKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKV 171
Query: 125 ITKDPWLMHYSLENAITPCYDFLKRYLVSDESTIEAIKSCTGLIYSKHPEK----NIQTL 180
+ K+P+LM YS++ + P +FLK + E I+++ + + K N L
Sbjct: 172 LVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYL 231
Query: 181 LENGVPESQVPILLCRSGY 199
E G +SQ+ ++ +GY
Sbjct: 232 KECGFGDSQIATMV--TGY 248