Miyakogusa Predicted Gene

Lj6g3v1931420.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1931420.1 Non Chatacterized Hit- tr|I1MF50|I1MF50_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,90.71,0,TPR_11,NULL;
TPR_2,Tetratricopeptide TPR2; TPR_7,Tetratricopeptide repeat;
TPR_8,Tetratricopeptide r,CUFF.60206.1
         (559 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G39090.1 | Symbols: APC7, AtAPC7 | tetratricopeptide repeat (...   751   0.0  
AT2G39090.2 | Symbols: APC7, AtAPC7 | tetratricopeptide repeat (...   717   0.0  
AT3G16320.1 | Symbols: CDC27a | Tetratricopeptide repeat (TPR)-l...    68   2e-11
AT3G48150.1 | Symbols: APC8, CDC23 | anaphase-promoting complex ...    67   3e-11
AT2G20000.1 | Symbols: HBT, CDC27b | CDC27  family protein | chr...    65   9e-11

>AT2G39090.1 | Symbols: APC7, AtAPC7 | tetratricopeptide repeat
           (TPR)-containing protein | chr2:16312771-16317233
           REVERSE LENGTH=558
          Length = 558

 Score =  751 bits (1939), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/532 (69%), Positives = 429/532 (80%), Gaps = 2/532 (0%)

Query: 1   MEVPKDQIATLLDHGLYNSAQMLGCFLVSSPAANAESAPHLKTESLVLLGDSFFQEREYR 60
           MEVPK+QIATL++HGLY+SA+MLGCFLVSSP  +AE++P LK E+L+LLGD+ F +RE+R
Sbjct: 1   MEVPKEQIATLIEHGLYDSAEMLGCFLVSSPTVSAETSPQLKAENLILLGDALFHQREHR 60

Query: 61  RAIHTYKQALQHYKMIPKQNMAXXXXXXXXXXXXXXXXXXXXXXXENEVKFKIASCHCSL 120
           RAIHTYKQAL HY  IPKQ+                         ENEV+FKIAS H +L
Sbjct: 61  RAIHTYKQALHHYTRIPKQSSGISRSSLSLSTRSSVNASSISAINENEVRFKIASSHFAL 120

Query: 121 NENKAALAEMDGIPVKARNLAMNLLLGKLYRICRQSRAAAAIYKECLRHCPYVLEAITAL 180
           NE KAA+AEM+   VK R+L MN+L+ KL+R    +R A A YKECLR CPYVLEA+  L
Sbjct: 121 NETKAAIAEMES--VKTRSLEMNILMAKLHRNSGYNRGAIAFYKECLRQCPYVLEAVIGL 178

Query: 181 SELGVTAKDIISLFPQTPNRSGRASSDHIDSSRWLQRYVEAQCCLASNDYKGALELYADL 240
           +ELGV+AKDIIS F QT NRS + S D ID +RWLQRYVEAQCC+AS+ YKGALEL+A+L
Sbjct: 179 AELGVSAKDIISSFTQTSNRSAKVSLDQIDPTRWLQRYVEAQCCVASHAYKGALELFAEL 238

Query: 241 LQRFPNNIHLLLEIAKVEAIIGKNEEAIMNFEKARSIDPYIITYMDEYAMLLKLKSEYSK 300
           LQRFPNN+HLL E AKVEAIIGKN+EAIM FEK RSIDPY +T MDEYAMLL++K +YS+
Sbjct: 239 LQRFPNNVHLLTETAKVEAIIGKNDEAIMRFEKVRSIDPYTLTSMDEYAMLLQIKCDYSR 298

Query: 301 LNKLVHDLLSIDPARPEVFVALSVLWERKDEKRALSYAEQSIRMDERHIPGYLIKGHLLL 360
           LNKLVHDLLS+D  R EVFVALSVLWERKD + ALSYAE+SIR+DERHIPGY++KG+LLL
Sbjct: 299 LNKLVHDLLSVDHTRAEVFVALSVLWERKDARTALSYAEKSIRVDERHIPGYIMKGNLLL 358

Query: 361 TMKRAEAAVSAFRGAQELRPDIRSYQGLVHTYLALSKIKEALYASREAMKAMPQSAKALK 420
             KR EAA  AFR AQ LR D+RSYQGLVH+YLA  K KEALY +REAM AMPQSAKALK
Sbjct: 359 QAKRPEAAAIAFRAAQNLRSDLRSYQGLVHSYLAFGKTKEALYTAREAMNAMPQSAKALK 418

Query: 421 LVGDVHASNSGGREKAKKFYESALRLESGYXXXXXXXXXXHVIEGRNGDAVSLLERYLKD 480
           LVGDVHA  S GREKAKKFYES LRLE GY          H++EGRNGDAVSLLERYLKD
Sbjct: 419 LVGDVHAFTSSGREKAKKFYESGLRLEPGYLGAVLALAELHLMEGRNGDAVSLLERYLKD 478

Query: 481 WADDSLHVKLAQVFAATNMLQEALSHYQAALRLNPHNEAAKRGLERLEKQMK 532
           +ADDSLHVKLAQVFAATNMLQ++LSH+QAALR+NP NEAAK+GL+RLEKQMK
Sbjct: 479 YADDSLHVKLAQVFAATNMLQDSLSHFQAALRINPQNEAAKKGLDRLEKQMK 530


>AT2G39090.2 | Symbols: APC7, AtAPC7 | tetratricopeptide repeat
           (TPR)-containing protein | chr2:16313087-16317233
           REVERSE LENGTH=514
          Length = 514

 Score =  717 bits (1852), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/513 (69%), Positives = 410/513 (79%), Gaps = 2/513 (0%)

Query: 1   MEVPKDQIATLLDHGLYNSAQMLGCFLVSSPAANAESAPHLKTESLVLLGDSFFQEREYR 60
           MEVPK+QIATL++HGLY+SA+MLGCFLVSSP  +AE++P LK E+L+LLGD+ F +RE+R
Sbjct: 1   MEVPKEQIATLIEHGLYDSAEMLGCFLVSSPTVSAETSPQLKAENLILLGDALFHQREHR 60

Query: 61  RAIHTYKQALQHYKMIPKQNMAXXXXXXXXXXXXXXXXXXXXXXXENEVKFKIASCHCSL 120
           RAIHTYKQAL HY  IPKQ+                         ENEV+FKIAS H +L
Sbjct: 61  RAIHTYKQALHHYTRIPKQSSGISRSSLSLSTRSSVNASSISAINENEVRFKIASSHFAL 120

Query: 121 NENKAALAEMDGIPVKARNLAMNLLLGKLYRICRQSRAAAAIYKECLRHCPYVLEAITAL 180
           NE KAA+AEM+   VK R+L MN+L+ KL+R    +R A A YKECLR CPYVLEA+  L
Sbjct: 121 NETKAAIAEMES--VKTRSLEMNILMAKLHRNSGYNRGAIAFYKECLRQCPYVLEAVIGL 178

Query: 181 SELGVTAKDIISLFPQTPNRSGRASSDHIDSSRWLQRYVEAQCCLASNDYKGALELYADL 240
           +ELGV+AKDIIS F QT NRS + S D ID +RWLQRYVEAQCC+AS+ YKGALEL+A+L
Sbjct: 179 AELGVSAKDIISSFTQTSNRSAKVSLDQIDPTRWLQRYVEAQCCVASHAYKGALELFAEL 238

Query: 241 LQRFPNNIHLLLEIAKVEAIIGKNEEAIMNFEKARSIDPYIITYMDEYAMLLKLKSEYSK 300
           LQRFPNN+HLL E AKVEAIIGKN+EAIM FEK RSIDPY +T MDEYAMLL++K +YS+
Sbjct: 239 LQRFPNNVHLLTETAKVEAIIGKNDEAIMRFEKVRSIDPYTLTSMDEYAMLLQIKCDYSR 298

Query: 301 LNKLVHDLLSIDPARPEVFVALSVLWERKDEKRALSYAEQSIRMDERHIPGYLIKGHLLL 360
           LNKLVHDLLS+D  R EVFVALSVLWERKD + ALSYAE+SIR+DERHIPGY++KG+LLL
Sbjct: 299 LNKLVHDLLSVDHTRAEVFVALSVLWERKDARTALSYAEKSIRVDERHIPGYIMKGNLLL 358

Query: 361 TMKRAEAAVSAFRGAQELRPDIRSYQGLVHTYLALSKIKEALYASREAMKAMPQSAKALK 420
             KR EAA  AFR AQ LR D+RSYQGLVH+YLA  K KEALY +REAM AMPQSAKALK
Sbjct: 359 QAKRPEAAAIAFRAAQNLRSDLRSYQGLVHSYLAFGKTKEALYTAREAMNAMPQSAKALK 418

Query: 421 LVGDVHASNSGGREKAKKFYESALRLESGYXXXXXXXXXXHVIEGRNGDAVSLLERYLKD 480
           LVGDVHA  S GREKAKKFYES LRLE GY          H++EGRNGDAVSLLERYLKD
Sbjct: 419 LVGDVHAFTSSGREKAKKFYESGLRLEPGYLGAVLALAELHLMEGRNGDAVSLLERYLKD 478

Query: 481 WADDSLHVKLAQVFAATNMLQEALSHYQAALRL 513
           +ADDSLHVKLAQVFAATNMLQ++LSH+QAALR 
Sbjct: 479 YADDSLHVKLAQVFAATNMLQDSLSHFQAALRF 511


>AT3G16320.1 | Symbols: CDC27a | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:5529534-5534465 FORWARD
           LENGTH=717
          Length = 717

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 80/304 (26%), Positives = 134/304 (44%), Gaps = 13/304 (4%)

Query: 233 ALELYADLLQRFPNNIHLLLEIAKVEAIIGKNEEAIMNFEKARSIDPYIITYMDEYAMLL 292
           AL  Y  L Q+  N   +L+++ K    +     A  +F  A    PY +  MD Y+ +L
Sbjct: 406 ALLAYQKLSQKQYNTHWVLMQVGKAYFELQDYFNADSSFTLAHQKYPYALEGMDTYSTVL 465

Query: 293 KLKSEYSKLNKLVHDLLSIDPARPEVFVALSVLWE-RKDEKRALSYAEQSIRMDERHIPG 351
               E  +L  L  +L+S+D   PE + A+   +  RKD   AL   +++I+++ER    
Sbjct: 466 YHLKEEMRLGYLAQELISVDRLSPESWCAVGNCYSLRKDHDTALKMFQRAIQLNERFTYA 525

Query: 352 YLIKGHLLLTMKRAEAAVSAFRGAQELRPDIRSYQ---GLVHTYLALSKIKEALYASREA 408
           + + GH    ++  E A   +R A  L  D R Y    GL  TYL   K + A +  + A
Sbjct: 526 HTLCGHEFAALEEFEDAERCYRKA--LGIDTRHYNAWYGLGMTYLRQEKFEFAQHQFQLA 583

Query: 409 MKAMPQSAKALKLVGDVHASNSGGREKAKKFYESALRLESGYXXXXXXXXXXHVIEGRNG 468
           ++  P+S+  +   G +    S   ++A    E A+  ++                G   
Sbjct: 584 LQINPRSSVIMCYYG-IALHESKRNDEALMMMEKAVLTDAKNPLPKYYKAHILTSLGDYH 642

Query: 469 DAVSLLERYLKDWA--DDSLHVKLAQVFAATNMLQEALSHYQAALRLNPHNEAA---KRG 523
            A  +LE  LK+ A  + S+H  L +++       +A+ H+  AL L+P    A   K  
Sbjct: 643 KAQKVLEE-LKECAPQESSVHASLGKIYNQLKQYDKAVLHFGIALDLSPSPSDAVKIKAY 701

Query: 524 LERL 527
           +ERL
Sbjct: 702 MERL 705


>AT3G48150.1 | Symbols: APC8, CDC23 | anaphase-promoting complex
           subunit 8 | chr3:17779800-17782565 REVERSE LENGTH=579
          Length = 579

 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 122/262 (46%), Gaps = 8/262 (3%)

Query: 244 FPNNIHLLLEIAKVEAIIGKNEEAIMNFEKARSIDPYIITYMDEYAMLLKLKSEYSKLNK 303
           F N I    + AK +  + + ++  + FE+    DPY +  MD Y+ +L  K   + L+ 
Sbjct: 269 FSNYIQA--QTAKAQYSLREFDQVEIMFEELLRNDPYRVEDMDLYSNVLYAKEACAALSY 326

Query: 304 LVHDLLSIDPARPEVFVALSVLWERKDE-KRALSYAEQSIRMDERHIPGYLIKGHLLLTM 362
           L H +   D  RPE    +   +  K + ++A+ Y  ++++++++++  + + GH  + M
Sbjct: 327 LAHKVFLTDKYRPESCCIIGNYYSLKGQHEKAVMYFRRALKLNKKYLSAWTLMGHEYVEM 386

Query: 363 KRAEAAVSAFRGAQELRP-DIRSYQGLVHTYLALSKIKEALYASREAMKAMPQSAKALKL 421
           K   AA+ A+R A ++ P D R++ GL   Y  +     AL+  R+++  +P  ++    
Sbjct: 387 KNTPAAIDAYRRAVDINPTDYRAWYGLGQAYEMMGMPFYALHYFRKSIFFLPNDSRLWIA 446

Query: 422 VGDVHASNS-GGREKAKKFYESALRLESGYXXXXXXXXXXHVIEGRNGDAVSLLERYLKD 480
           +   + +      E+A K Y+ A+                H   GRN +A    E+ L+ 
Sbjct: 447 MAKCYQTEQLYMLEEAIKCYKRAVNCTDTEGIALNQLAKLHQKLGRNEEAAYYFEKDLER 506

Query: 481 WADDSL---HVKLAQVFAATNM 499
              + L   ++  A VF AT+ 
Sbjct: 507 MDAEGLEGPNMFEALVFLATHF 528


>AT2G20000.1 | Symbols: HBT, CDC27b | CDC27  family protein |
           chr2:8632324-8636900 REVERSE LENGTH=744
          Length = 744

 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 134/290 (46%), Gaps = 12/290 (4%)

Query: 233 ALELYADLLQRFPNNIHLLLEIAKVEAIIGKNEEAIMNFEKARSIDPYIITYMDEYAMLL 292
           AL+ Y  L  +  N   +L ++ K    +    EA   F  AR   PY +  MD Y+ +L
Sbjct: 435 ALDTYMKLPHKHYNTGWVLSQVGKAYFELIDYLEAEKAFRLARLASPYCLEGMDIYSTVL 494

Query: 293 KLKSEYSKLNKLVHDLLSIDPARPEVFVALSVLWE-RKDEKRALSYAEQSIRMDERHIPG 351
               E  KL+ L  +L+S D   P+ + A+   +  +KD + AL    ++++++ R    
Sbjct: 495 YHLKEDMKLSYLAQELISTDRLAPQSWCAMGNCYSLQKDHETALKNFLRAVQLNPRFAYA 554

Query: 352 YLIKGHLLLTMKRAEAAVSAFRGAQELRPDIRSYQ---GLVHTYLALSKIKEALYASREA 408
           + + GH   T++  E  + +++ A  LR D R Y    GL   YL   K++ + +  R A
Sbjct: 555 HTLCGHEYTTLEDFENGMKSYQNA--LRVDTRHYNAWYGLGMIYLRQEKLEFSEHHFRMA 612

Query: 409 MKAMPQSAKALKLVG-DVHASNSGGREKAKKFYESALRLESGYXXXXXXXXXXHVIEGRN 467
               P S+  +  +G  +HA      E+A +  E A+  +              V   R 
Sbjct: 613 FLINPSSSVIMSYLGTSLHALKRS--EEALEIMEQAIVADRKNPLPMYQKANILVCLERL 670

Query: 468 GDAVSLLERYLKDWA--DDSLHVKLAQVFAATNMLQEALSHYQAALRLNP 515
            +A+ +LE  LK++A  + S++  + +++   NM  +A+ H+  AL + P
Sbjct: 671 DEALEVLEE-LKEYAPSESSVYALMGRIYKRRNMHDKAMLHFGLALDMKP 719