Miyakogusa Predicted Gene

Lj6g3v1918290.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1918290.1 Non Chatacterized Hit- tr|C9PXX7|C9PXX7_9BACT
Putative uncharacterized protein OS=Prevotella sp.
ora,27.04,2e-18,PUTATIVE UNCHARACTERIZED PROTEIN,NULL; NITROGEN
METABOLIC REGULATION PROTEIN NMR-RELATED,NULL; seg,N,CUFF.60190.1
         (412 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G18660.1 | Symbols: PCB2 | NAD(P)-binding Rossmann-fold super...   567   e-162
AT2G34460.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...    50   3e-06

>AT5G18660.1 | Symbols: PCB2 | NAD(P)-binding Rossmann-fold
           superfamily protein | chr5:6220872-6222125 REVERSE
           LENGTH=417
          Length = 417

 Score =  567 bits (1462), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 284/417 (68%), Positives = 323/417 (77%), Gaps = 6/417 (1%)

Query: 1   MSLCYPSNLITLHSPKHQXXXXXXXXXXXXXIKLLKVSSTPHK-----PIKFSRETLKLS 55
           MSLC   N+   +SPK +             +K   ++ST H       +K+ R  LK  
Sbjct: 1   MSLCSSFNVFASYSPKPKTIFKDSKFISQFQVKSSPLASTFHTNESSTSLKYKRARLKPI 60

Query: 56  ASLTPSQAVNTTPSSYRNKNPKDVNVLVVGSTGYIGKFVVTELVKRGFNVIAVAREKSGT 115
           +SL    +   T  S+RNK+PKD+NVLVVGSTGYIG+FVV E++KRGFNVIAVAREKSG 
Sbjct: 61  SSLDSGISEIATSPSFRNKSPKDINVLVVGSTGYIGRFVVKEMIKRGFNVIAVAREKSGI 120

Query: 116 KGSNDKDATLSQLRGANVCFSDVTXXXXXXXXXXXXGVSFDVVVSCLASRNGGVKDSWKI 175
           +G NDK+ TL QL+GANVCFSDVT            G   DVVVSCLASRNGG+KDSWKI
Sbjct: 121 RGKNDKEETLKQLQGANVCFSDVTELDVLEKSIENLGFGVDVVVSCLASRNGGIKDSWKI 180

Query: 176 DYEATKNSLVAGRKRGASHFVLLSAICVQKPLLEFQRAKLKFXXXXXXXXXXX-XGFSYS 234
           DYEATKNSLVAG+K GA HFVLLSAICVQKPLLEFQRAKLKF              F+YS
Sbjct: 181 DYEATKNSLVAGKKFGAKHFVLLSAICVQKPLLEFQRAKLKFEAELMDLAEQQDSSFTYS 240

Query: 235 IVRPTAFFKSLGGQVELVKDGKPYVMFGDGRLCACKPISEPDLASFIVDCVLSEDKINKV 294
           IVRPTAFFKSLGGQVE+VKDGKPYVMFGDG+LCACKPISE DLA+FI DCVL E+KIN+V
Sbjct: 241 IVRPTAFFKSLGGQVEIVKDGKPYVMFGDGKLCACKPISEQDLAAFIADCVLEENKINQV 300

Query: 295 LPIGGPGKALTPLEQGEMLFKLVGKKPNFLKVPIGIMDFAIGVLDNLVKVFPSLEDAAEF 354
           LPIGGPGKALTPLEQGE+LFK++G++P FLKVPI IMDF IGVLD++ K+FPS+ +AAEF
Sbjct: 301 LPIGGPGKALTPLEQGEILFKILGREPKFLKVPIEIMDFVIGVLDSIAKIFPSVGEAAEF 360

Query: 355 GKIGRYYAVESMLILDPETGEYSAEKTPSYGNDTLEDFFARVLREGMAGQELGEQIM 411
           GKIGRYYA ESMLILDPETGEYS EKTPSYG DTLEDFFA+V+REGMAGQELGEQ  
Sbjct: 361 GKIGRYYAAESMLILDPETGEYSEEKTPSYGKDTLEDFFAKVIREGMAGQELGEQFF 417


>AT2G34460.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr2:14529635-14530732 FORWARD LENGTH=280
          Length = 280

 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 58/128 (45%), Gaps = 9/128 (7%)

Query: 77  KDVNVLVVGSTGYIGKFVVTELVKRGFNVIAVAREKSGTKGSNDKDATLSQLRGANVCFS 136
           K   V V G+TG  GK +V +L+ RGF V A  R+    K S   D +L  +R      +
Sbjct: 45  KTKKVFVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAKTSFKDDPSLQIVR------A 98

Query: 137 DVTXXXXXXXXXXXXGVSFDVVVSCLASRNG-GVKDSWKIDYEATKNSLVAGRKRGASHF 195
           DVT            G     V+     R G  +   WK+D   T N + A RK+G   F
Sbjct: 99  DVT--EGPDKLAEVIGDDSQAVICATGFRPGFDIFTPWKVDNFGTVNLVDACRKQGVEKF 156

Query: 196 VLLSAICV 203
           VL+S+I V
Sbjct: 157 VLVSSILV 164