Miyakogusa Predicted Gene

Lj6g3v1918280.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1918280.1 Non Chatacterized Hit- tr|A2ZT53|A2ZT53_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,64.06,2e-17,NAD(P)-binding Rossmann-fold domains,NULL; seg,NULL;
no description,NAD(P)-binding domain,CUFF.60189.1
         (361 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G39080.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...   390   e-109

>AT2G39080.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr2:16309981-16312475 REVERSE LENGTH=351
          Length = 351

 Score =  390 bits (1003), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 192/304 (63%), Positives = 225/304 (74%), Gaps = 5/304 (1%)

Query: 58  PSCGIGLKLTPFSLMMATQLQVSEGAPSEQDSGS---SPSLPIGEHDLLIVGPGVLGRLV 114
           P     L LT  S +MAT +Q S  +   + S        + IG +DLLIVGPGVLGRLV
Sbjct: 46  PKVSFFLPLT--SSLMATPIQASSSSTIGETSDGLKVQSHVSIGANDLLIVGPGVLGRLV 103

Query: 115 AEQWRKEYPGCQVFGQTITTNHHEELIKMGITPSLNWTKATQKFPYVIFCAPPYQSSDYL 174
           AEQWR+E+P  Q+FGQT+TTNHH EL  +GI PSL  T+   KF YVIFCAPP QS+DY 
Sbjct: 104 AEQWRQEHPESQIFGQTVTTNHHGELENLGIKPSLKGTEYGGKFSYVIFCAPPSQSADYA 163

Query: 175 GDIRLAALCWNGEGSFLYTSSSAPYDCNDNGLCDEDTPVVPIGRSPRTDVLLKAENVVLE 234
           G++R AA  WNGEGSFL+TSSSAPYDC DNG C+ED+PVVP+G+SPRTDVLLKAE VVLE
Sbjct: 164 GEVRNAASNWNGEGSFLFTSSSAPYDCFDNGECNEDSPVVPLGKSPRTDVLLKAEKVVLE 223

Query: 235 FGGSVVRLSGLYKEERGAHAYWLEKGIVESRPDHVLNLIHYEDAASLSIAILKKQFRGRI 294
            GG+V+RL+GLY E RGAH YWL K  +++RPDH+LNLIHYEDAASL++AI+KK+   RI
Sbjct: 224 CGGTVLRLAGLYTETRGAHTYWLSKETIDARPDHILNLIHYEDAASLAVAIMKKKAGARI 283

Query: 295 FLGCDNHPLSRQEVMDLVNXXXXXXXXXXXXXXXDDPLGKRLNNSKTRQEIGWEPKYSSF 354
           FLGCDNHPLSRQEVMDL+                  PLGK+LNNSKTR EIGWEPKY SF
Sbjct: 284 FLGCDNHPLSRQEVMDLMAQSGKFDKKFKGFTSTSGPLGKKLNNSKTRAEIGWEPKYPSF 343

Query: 355 AHFL 358
           A F 
Sbjct: 344 AQFF 347