Miyakogusa Predicted Gene
- Lj6g3v1916080.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1916080.1 Non Chatacterized Hit- tr|I1MF85|I1MF85_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.36187
PE,82.22,0,OS08G0384900 PROTEIN,NULL; MEMBRANE ASSOCIATED RING
FINGER,NULL; RING/U-box,NULL; seg,NULL; RINGv,Zi,CUFF.60179.1
(315 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G06330.3 | Symbols: | RING/U-box superfamily protein | chr3:... 215 3e-56
AT3G06330.1 | Symbols: | RING/U-box superfamily protein | chr3:... 214 5e-56
AT5G18760.1 | Symbols: | RING/U-box superfamily protein | chr5:... 206 2e-53
AT3G06330.2 | Symbols: | RING/U-box superfamily protein | chr3:... 137 7e-33
AT3G09760.1 | Symbols: | RING/U-box superfamily protein | chr3:... 102 2e-22
AT5G60580.3 | Symbols: | RING/U-box superfamily protein | chr5:... 102 3e-22
AT5G60580.1 | Symbols: | RING/U-box superfamily protein | chr5:... 102 3e-22
AT5G60580.4 | Symbols: | RING/U-box superfamily protein | chr5:... 102 3e-22
AT5G60580.2 | Symbols: | RING/U-box superfamily protein | chr5:... 102 3e-22
AT5G03180.1 | Symbols: | RING/U-box superfamily protein | chr5:... 97 2e-20
AT5G03180.2 | Symbols: | RING/U-box superfamily protein | chr5:... 97 2e-20
AT4G34100.2 | Symbols: | RING/U-box superfamily protein | chr4:... 56 4e-08
AT4G34100.1 | Symbols: | RING/U-box superfamily protein | chr4:... 56 4e-08
AT5G05830.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 54 2e-07
AT1G14260.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 52 5e-07
AT1G14260.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 52 5e-07
AT5G59000.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 51 1e-06
AT5G08750.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 51 1e-06
AT5G08750.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 51 1e-06
AT5G08750.3 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 51 1e-06
AT5G01070.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 49 3e-06
AT5G63780.1 | Symbols: SHA1 | RING/FYVE/PHD zinc finger superfam... 49 6e-06
>AT3G06330.3 | Symbols: | RING/U-box superfamily protein |
chr3:1917334-1919330 FORWARD LENGTH=363
Length = 363
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 133/299 (44%), Positives = 163/299 (54%), Gaps = 13/299 (4%)
Query: 22 QLNKEDSDNRPSGKRPDISLQVPPRPAGFGTTSGGK-VLNHSQSFSKGN-SSPRGFLRAL 79
Q+ ++ +++ PS D+S+Q+P R FG K L + SF G SSPRG LR L
Sbjct: 30 QVTEKSTEDVPSCSHLDLSIQIPSRSLPFGNGRNPKGSLKSTPSFKSGTTSSPRGILRNL 89
Query: 80 SFKRKG-NVTDGERSSLLNPEPKTSADNPNMASISEVP-WSRCTSLPVTPATNLSPAVST 137
S K+K + + ERSSLL+P +A PN + P W RC SLP A LSP VST
Sbjct: 90 SLKKKVISQPESERSSLLSPGLMETAKKPNATGSTTSPYWKRCLSLPSRQAAKLSPVVST 149
Query: 138 PISATTYNEQIKPHKDVVRAKVSRSLSVPGRNVVIVRSVSFSTRXXXXXXXXXXXXXTPA 197
+SA + P+KD SRSLS+PGRN VIVRS+SF +
Sbjct: 150 QLSAGVPGD--PPNKDY-----SRSLSMPGRNKVIVRSISFDNHKARVSSETSADQVSSV 202
Query: 198 PVXXXXXXXXXXXXXVCRICFDVCDERNTFKMECSCKGDLTLVHEECLIKWFSLKGNKKC 257
VCRIC DVC+E NT KMECSCKGDL LVHE C +KWFS KG + C
Sbjct: 203 -PPEETDEEIPEEEAVCRICLDVCEEGNTLKMECSCKGDLRLVHEACAMKWFSTKGTRTC 261
Query: 258 DVCGQEVQNLPVTXXXX-XXXXXXXXXXXXXXXXXXESISAWQDFVVLVLISTICYFFF 315
DVC Q VQNLPVT +++SAWQ+FVVLVLIST+CYFFF
Sbjct: 262 DVCRQVVQNLPVTLVRVPTPNQQNNRRGSSQQNMPSQTVSAWQEFVVLVLISTVCYFFF 320
>AT3G06330.1 | Symbols: | RING/U-box superfamily protein |
chr3:1917334-1919709 FORWARD LENGTH=426
Length = 426
Score = 214 bits (546), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 133/299 (44%), Positives = 163/299 (54%), Gaps = 13/299 (4%)
Query: 22 QLNKEDSDNRPSGKRPDISLQVPPRPAGFGTTSGGK-VLNHSQSFSKGN-SSPRGFLRAL 79
Q+ ++ +++ PS D+S+Q+P R FG K L + SF G SSPRG LR L
Sbjct: 30 QVTEKSTEDVPSCSHLDLSIQIPSRSLPFGNGRNPKGSLKSTPSFKSGTTSSPRGILRNL 89
Query: 80 SFKRKG-NVTDGERSSLLNPEPKTSADNPNMASISEVP-WSRCTSLPVTPATNLSPAVST 137
S K+K + + ERSSLL+P +A PN + P W RC SLP A LSP VST
Sbjct: 90 SLKKKVISQPESERSSLLSPGLMETAKKPNATGSTTSPYWKRCLSLPSRQAAKLSPVVST 149
Query: 138 PISATTYNEQIKPHKDVVRAKVSRSLSVPGRNVVIVRSVSFSTRXXXXXXXXXXXXXTPA 197
+SA + P+KD SRSLS+PGRN VIVRS+SF +
Sbjct: 150 QLSAGVPGD--PPNKDY-----SRSLSMPGRNKVIVRSISFDNHKARVSSETSADQVSSV 202
Query: 198 PVXXXXXXXXXXXXXVCRICFDVCDERNTFKMECSCKGDLTLVHEECLIKWFSLKGNKKC 257
VCRIC DVC+E NT KMECSCKGDL LVHE C +KWFS KG + C
Sbjct: 203 -PPEETDEEIPEEEAVCRICLDVCEEGNTLKMECSCKGDLRLVHEACAMKWFSTKGTRTC 261
Query: 258 DVCGQEVQNLPVTXXXX-XXXXXXXXXXXXXXXXXXESISAWQDFVVLVLISTICYFFF 315
DVC Q VQNLPVT +++SAWQ+FVVLVLIST+CYFFF
Sbjct: 262 DVCRQVVQNLPVTLVRVPTPNQQNNRRGSSQQNMPSQTVSAWQEFVVLVLISTVCYFFF 320
>AT5G18760.1 | Symbols: | RING/U-box superfamily protein |
chr5:6258508-6260828 REVERSE LENGTH=411
Length = 411
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 162/301 (53%), Gaps = 29/301 (9%)
Query: 18 QADNQLNKEDSDNRPSGKRPDISLQVPPRPAGFGTTSGGKVLNHSQSFSKGNSSPRGFLR 77
Q Q ++ S ++PSG + D+S+Q+PP+P + G LR
Sbjct: 31 QVKEQSVEDVSRSQPSGSQLDVSIQIPPKP----------------------TPSLGILR 68
Query: 78 ALSFKRKGNVTDGERSSLLNPEPKTSADNPNMAS-ISEVPWSRCTSLPVTPATNLSPAVS 136
LS KRK ++ + ER LL+P +++ P +AS I+ W RC SLP + + LS VS
Sbjct: 69 NLSLKRKASLPNYERRLLLSPSVSETSEKPLVASPITSPYWKRCLSLPSSNSAKLSLVVS 128
Query: 137 T-PISATTYNEQIKPHKDVVRAKVSRSLSVPGRNVVIVRSVSFSTRXXXXXXXXXXXXXT 195
T P+SA ++EQ K +KD + A VSRSLS+ N VIVR+VSF T
Sbjct: 129 TTPVSAVVHSEQPKSNKDGLHASVSRSLSM---NRVIVRAVSFDDNKNHISNEANGDQIT 185
Query: 196 PAPVXXXXXXXXXXXXXVCRICFDVCDERNTFKMECSCKGDLTLVHEECLIKWFSLKGNK 255
P P VCRIC DVC+E NT KMECSCKGDL LVHE C IKWFS KG +
Sbjct: 186 PVP-AEETEEEIPEEEAVCRICLDVCEEGNTLKMECSCKGDLRLVHEHCAIKWFSTKGTR 244
Query: 256 KCDVCGQEVQNLPVTXXXX-XXXXXXXXXXXXXXXXXXESISAWQDFVVLVLISTICYFF 314
CDVC QEV+NLPV +SIS Q+FVVLVLIST+CYFF
Sbjct: 245 ICDVCRQEVRNLPVILLRVPTINQLTNRRELTQQSSEPQSISVGQEFVVLVLISTVCYFF 304
Query: 315 F 315
F
Sbjct: 305 F 305
>AT3G06330.2 | Symbols: | RING/U-box superfamily protein |
chr3:1918512-1919709 FORWARD LENGTH=257
Length = 257
Score = 137 bits (346), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 85/152 (55%), Gaps = 2/152 (1%)
Query: 165 VPGRNVVIVRSVSFSTRXXXXXXXXXXXXXTPAPVXXXXXXXXXXXXXVCRICFDVCDER 224
+PGRN VIVRS+SF + P VCRIC DVC+E
Sbjct: 1 MPGRNKVIVRSISFDNHKARVSSETSADQVSSVP-PEETDEEIPEEEAVCRICLDVCEEG 59
Query: 225 NTFKMECSCKGDLTLVHEECLIKWFSLKGNKKCDVCGQEVQNLPVTXXXX-XXXXXXXXX 283
NT KMECSCKGDL LVHE C +KWFS KG + CDVC Q VQNLPVT
Sbjct: 60 NTLKMECSCKGDLRLVHEACAMKWFSTKGTRTCDVCRQVVQNLPVTLVRVPTPNQQNNRR 119
Query: 284 XXXXXXXXXESISAWQDFVVLVLISTICYFFF 315
+++SAWQ+FVVLVLIST+CYFFF
Sbjct: 120 GSSQQNMPSQTVSAWQEFVVLVLISTVCYFFF 151
>AT3G09760.1 | Symbols: | RING/U-box superfamily protein |
chr3:2992975-2995451 REVERSE LENGTH=491
Length = 491
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 61/104 (58%), Gaps = 5/104 (4%)
Query: 213 VCRICF-DVCDERNTFKMECSCKGDLTLVHEECLIKWFSLKGNKKCDVCGQEVQNLPVTX 271
VCRIC ++ ++ FKMEC C+G+L L H+EC IKWF++KGN+ CDVC QEVQNLPVT
Sbjct: 265 VCRICLVELGEDSEAFKMECLCRGELALAHKECTIKWFTIKGNRTCDVCKQEVQNLPVTL 324
Query: 272 XXXXXXXXXXXXXXXXXXXXXESISAWQDFVVLVLISTICYFFF 315
S WQD +LV++S + YF F
Sbjct: 325 LRMQNSRGSIGAPDAEAA----HYSLWQDVPILVIVSMLAYFCF 364
>AT5G60580.3 | Symbols: | RING/U-box superfamily protein |
chr5:24354298-24356706 FORWARD LENGTH=487
Length = 487
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 142/341 (41%), Gaps = 49/341 (14%)
Query: 16 SHQAD--NQLNKEDSDNRPSGKRPDISLQVPPRPAG-----------------------F 50
S+QA+ + + ++ S N +R ++SLQ+P R AG F
Sbjct: 22 SNQAEGSSAITEDTSANVQQWRRKNLSLQIPSRAAGLSPEDSVVIKMPPTPSPTPRRVNF 81
Query: 51 GTTSG--GKVLNHSQSFSKGNSSPRGFLRALSFKRKGNVTDGERSSLLNPEPKTSADNPN 108
TS G S +G SS + L K K + TD E+ P S + +
Sbjct: 82 ALTSSSPGPTPTSSSVLPRGKSSLKNLLPKAGCKPKTSNTDIEKGQGNACSPPASQEKAS 141
Query: 109 MA---SISEV---PWSRCTSLPVTPATNLSPAVSTPISATTYNEQIKPHKDVVRAKVSRS 162
++ S+S++ R +SLPVTP LS + S T+ Q K V SRS
Sbjct: 142 ISRSLSLSKLFTPRIKRTSSLPVTPVI-LSNSESAH-GGTSVAPQTPNRKGSVHIARSRS 199
Query: 163 -------LSVPGRNVVIVRSVSFSTRXXXXXXXXXXXXXTPAPVXXXXXXXXXXXXXVCR 215
LS+ G + R + + R VCR
Sbjct: 200 VPLNDKELSLKGMDSFF-RVIPSTPRVKEGDVFSNASEAGNTETGDADGEDIPEDEAVCR 258
Query: 216 ICF-DVCDERNTFKMECSCKGDLTLVHEECLIKWFSLKGNKKCDVCGQEVQNLPVTXXXX 274
IC ++C+ T KMECSCKG+L L H++C +KWF++KGNK C+VC QEV+NLPVT
Sbjct: 259 ICLVELCEGGETLKMECSCKGELALAHKDCALKWFTIKGNKTCEVCKQEVKNLPVT---- 314
Query: 275 XXXXXXXXXXXXXXXXXXESISAWQDFVVLVLISTICYFFF 315
WQ+ VLV+IS + YF F
Sbjct: 315 -LLRIQSLRNSGVPQLDVSGYRVWQEVPVLVIISMLAYFCF 354
>AT5G60580.1 | Symbols: | RING/U-box superfamily protein |
chr5:24354298-24356706 FORWARD LENGTH=487
Length = 487
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 142/341 (41%), Gaps = 49/341 (14%)
Query: 16 SHQAD--NQLNKEDSDNRPSGKRPDISLQVPPRPAG-----------------------F 50
S+QA+ + + ++ S N +R ++SLQ+P R AG F
Sbjct: 22 SNQAEGSSAITEDTSANVQQWRRKNLSLQIPSRAAGLSPEDSVVIKMPPTPSPTPRRVNF 81
Query: 51 GTTSG--GKVLNHSQSFSKGNSSPRGFLRALSFKRKGNVTDGERSSLLNPEPKTSADNPN 108
TS G S +G SS + L K K + TD E+ P S + +
Sbjct: 82 ALTSSSPGPTPTSSSVLPRGKSSLKNLLPKAGCKPKTSNTDIEKGQGNACSPPASQEKAS 141
Query: 109 MA---SISEV---PWSRCTSLPVTPATNLSPAVSTPISATTYNEQIKPHKDVVRAKVSRS 162
++ S+S++ R +SLPVTP LS + S T+ Q K V SRS
Sbjct: 142 ISRSLSLSKLFTPRIKRTSSLPVTPVI-LSNSESAH-GGTSVAPQTPNRKGSVHIARSRS 199
Query: 163 -------LSVPGRNVVIVRSVSFSTRXXXXXXXXXXXXXTPAPVXXXXXXXXXXXXXVCR 215
LS+ G + R + + R VCR
Sbjct: 200 VPLNDKELSLKGMDSFF-RVIPSTPRVKEGDVFSNASEAGNTETGDADGEDIPEDEAVCR 258
Query: 216 ICF-DVCDERNTFKMECSCKGDLTLVHEECLIKWFSLKGNKKCDVCGQEVQNLPVTXXXX 274
IC ++C+ T KMECSCKG+L L H++C +KWF++KGNK C+VC QEV+NLPVT
Sbjct: 259 ICLVELCEGGETLKMECSCKGELALAHKDCALKWFTIKGNKTCEVCKQEVKNLPVT---- 314
Query: 275 XXXXXXXXXXXXXXXXXXESISAWQDFVVLVLISTICYFFF 315
WQ+ VLV+IS + YF F
Sbjct: 315 -LLRIQSLRNSGVPQLDVSGYRVWQEVPVLVIISMLAYFCF 354
>AT5G60580.4 | Symbols: | RING/U-box superfamily protein |
chr5:24354298-24356706 FORWARD LENGTH=494
Length = 494
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 142/341 (41%), Gaps = 49/341 (14%)
Query: 16 SHQAD--NQLNKEDSDNRPSGKRPDISLQVPPRPAG-----------------------F 50
S+QA+ + + ++ S N +R ++SLQ+P R AG F
Sbjct: 22 SNQAEGSSAITEDTSANVQQWRRKNLSLQIPSRAAGLSPEDSVVIKMPPTPSPTPRRVNF 81
Query: 51 GTTSG--GKVLNHSQSFSKGNSSPRGFLRALSFKRKGNVTDGERSSLLNPEPKTSADNPN 108
TS G S +G SS + L K K + TD E+ P S + +
Sbjct: 82 ALTSSSPGPTPTSSSVLPRGKSSLKNLLPKAGCKPKTSNTDIEKGQGNACSPPASQEKAS 141
Query: 109 MA---SISEV---PWSRCTSLPVTPATNLSPAVSTPISATTYNEQIKPHKDVVRAKVSRS 162
++ S+S++ R +SLPVTP LS + S T+ Q K V SRS
Sbjct: 142 ISRSLSLSKLFTPRIKRTSSLPVTPVI-LSNSESAH-GGTSVAPQTPNRKGSVHIARSRS 199
Query: 163 -------LSVPGRNVVIVRSVSFSTRXXXXXXXXXXXXXTPAPVXXXXXXXXXXXXXVCR 215
LS+ G + R + + R VCR
Sbjct: 200 VPLNDKELSLKGMDSFF-RVIPSTPRVKEGDVFSNASEAGNTETGDADGEDIPEDEAVCR 258
Query: 216 ICF-DVCDERNTFKMECSCKGDLTLVHEECLIKWFSLKGNKKCDVCGQEVQNLPVTXXXX 274
IC ++C+ T KMECSCKG+L L H++C +KWF++KGNK C+VC QEV+NLPVT
Sbjct: 259 ICLVELCEGGETLKMECSCKGELALAHKDCALKWFTIKGNKTCEVCKQEVKNLPVT---- 314
Query: 275 XXXXXXXXXXXXXXXXXXESISAWQDFVVLVLISTICYFFF 315
WQ+ VLV+IS + YF F
Sbjct: 315 -LLRIQSLRNSGVPQLDVSGYRVWQEVPVLVIISMLAYFCF 354
>AT5G60580.2 | Symbols: | RING/U-box superfamily protein |
chr5:24354298-24356706 FORWARD LENGTH=494
Length = 494
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 142/341 (41%), Gaps = 49/341 (14%)
Query: 16 SHQAD--NQLNKEDSDNRPSGKRPDISLQVPPRPAG-----------------------F 50
S+QA+ + + ++ S N +R ++SLQ+P R AG F
Sbjct: 22 SNQAEGSSAITEDTSANVQQWRRKNLSLQIPSRAAGLSPEDSVVIKMPPTPSPTPRRVNF 81
Query: 51 GTTSG--GKVLNHSQSFSKGNSSPRGFLRALSFKRKGNVTDGERSSLLNPEPKTSADNPN 108
TS G S +G SS + L K K + TD E+ P S + +
Sbjct: 82 ALTSSSPGPTPTSSSVLPRGKSSLKNLLPKAGCKPKTSNTDIEKGQGNACSPPASQEKAS 141
Query: 109 MA---SISEV---PWSRCTSLPVTPATNLSPAVSTPISATTYNEQIKPHKDVVRAKVSRS 162
++ S+S++ R +SLPVTP LS + S T+ Q K V SRS
Sbjct: 142 ISRSLSLSKLFTPRIKRTSSLPVTPVI-LSNSESAH-GGTSVAPQTPNRKGSVHIARSRS 199
Query: 163 -------LSVPGRNVVIVRSVSFSTRXXXXXXXXXXXXXTPAPVXXXXXXXXXXXXXVCR 215
LS+ G + R + + R VCR
Sbjct: 200 VPLNDKELSLKGMDSFF-RVIPSTPRVKEGDVFSNASEAGNTETGDADGEDIPEDEAVCR 258
Query: 216 ICF-DVCDERNTFKMECSCKGDLTLVHEECLIKWFSLKGNKKCDVCGQEVQNLPVTXXXX 274
IC ++C+ T KMECSCKG+L L H++C +KWF++KGNK C+VC QEV+NLPVT
Sbjct: 259 ICLVELCEGGETLKMECSCKGELALAHKDCALKWFTIKGNKTCEVCKQEVKNLPVT---- 314
Query: 275 XXXXXXXXXXXXXXXXXXESISAWQDFVVLVLISTICYFFF 315
WQ+ VLV+IS + YF F
Sbjct: 315 -LLRIQSLRNSGVPQLDVSGYRVWQEVPVLVIISMLAYFCF 354
>AT5G03180.1 | Symbols: | RING/U-box superfamily protein |
chr5:754201-756411 REVERSE LENGTH=462
Length = 462
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 213 VCRICF-DVCDERNTFKMECSCKGDLTLVHEECLIKWFSLKGNKKCDVCGQEVQNLPVTX 271
VCRIC ++ ++ FKMEC CKG+L L H+ C IKWF++KGN CDVC QEV+NLPVT
Sbjct: 246 VCRICMVEMEEDEEAFKMECMCKGELALAHKTCTIKWFTIKGNITCDVCKQEVRNLPVTL 305
Query: 272 XXXXXXXXXXXXXXXXXXXXXESISAWQDFVVLVLISTICYFFF 315
++ WQD +LV++S + YF F
Sbjct: 306 LRVQDSQNRSRAARDIEISRFNNV--WQDIPILVIVSMLAYFCF 347
>AT5G03180.2 | Symbols: | RING/U-box superfamily protein |
chr5:754201-756411 REVERSE LENGTH=466
Length = 466
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 213 VCRICF-DVCDERNTFKMECSCKGDLTLVHEECLIKWFSLKGNKKCDVCGQEVQNLPVTX 271
VCRIC ++ ++ FKMEC CKG+L L H+ C IKWF++KGN CDVC QEV+NLPVT
Sbjct: 250 VCRICMVEMEEDEEAFKMECMCKGELALAHKTCTIKWFTIKGNITCDVCKQEVRNLPVTL 309
Query: 272 XXXXXXXXXXXXXXXXXXXXXESISAWQDFVVLVLISTICYFFF 315
++ WQD +LV++S + YF F
Sbjct: 310 LRVQDSQNRSRAARDIEISRFNNV--WQDIPILVIVSMLAYFCF 351
>AT4G34100.2 | Symbols: | RING/U-box superfamily protein |
chr4:16330590-16334864 FORWARD LENGTH=1107
Length = 1107
Score = 55.8 bits (133), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 213 VCRICFDVCDERNTFKMECSCKGDLTLVHEECLIKWFSLKGNKKCDVCGQEVQNLPV 269
VCRIC + D N + C+C G + VH++CL++W + ++C+VC PV
Sbjct: 67 VCRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHPFSFSPV 123
>AT4G34100.1 | Symbols: | RING/U-box superfamily protein |
chr4:16330590-16334864 FORWARD LENGTH=1108
Length = 1108
Score = 55.8 bits (133), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 213 VCRICFDVCDERNTFKMECSCKGDLTLVHEECLIKWFSLKGNKKCDVCGQEVQNLPV 269
VCRIC + D N + C+C G + VH++CL++W + ++C+VC PV
Sbjct: 67 VCRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHPFSFSPV 123
>AT5G05830.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr5:1755910-1756825 FORWARD LENGTH=204
Length = 204
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 214 CRICFDVCDERNT-----FKMECSCKGDLTLVHEECLIKWFSLKGNKKCDVCGQEVQNL 267
CRIC D N ++ CSCK DL H+ C WF +KGNK C+VCG N+
Sbjct: 79 CRICHMSLDAANLESGVPIELGCSCKADLAAAHKHCAETWFKIKGNKICEVCGSIAGNV 137
>AT1G14260.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr1:4873200-4874430 FORWARD LENGTH=265
Length = 265
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 214 CRICFDVCDERNTFKMECSCKGDLTLVHEECLIKWFSLKGNKKCDVCGQEVQ 265
CRIC D CD +N + C+C G L H +C+ +W + KGN C++C Q Q
Sbjct: 57 CRICQDECDIKN-LESPCACNGSLKYAHRKCVQRWCNEKGNTICEICHQPYQ 107
>AT1G14260.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr1:4873200-4874430 FORWARD LENGTH=265
Length = 265
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 214 CRICFDVCDERNTFKMECSCKGDLTLVHEECLIKWFSLKGNKKCDVCGQEVQ 265
CRIC D CD +N + C+C G L H +C+ +W + KGN C++C Q Q
Sbjct: 57 CRICQDECDIKN-LESPCACNGSLKYAHRKCVQRWCNEKGNTICEICHQPYQ 107
>AT5G59000.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr5:23818768-23820018 FORWARD LENGTH=231
Length = 231
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 227 FKMECSCKGDLTLVHEECLIKWFSLKGNKKCDVCGQEVQNL 267
++ CSCKGDL + H +C WF +KGN C++CG N+
Sbjct: 130 LQLGCSCKGDLGVAHSKCAETWFKIKGNMTCEICGAMALNV 170
>AT5G08750.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr5:2853066-2854343 FORWARD LENGTH=363
Length = 363
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 227 FKMECSCKGDLTLVHEECLIKWFSLKGNKKCDVCGQEVQNL 267
++ CSCK DL LVH C +KWF G+ C++CG+ +N+
Sbjct: 123 LELGCSCKNDLALVHYACALKWFVNHGSTVCEICGKTTENI 163
>AT5G08750.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr5:2853066-2854343 FORWARD LENGTH=363
Length = 363
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 227 FKMECSCKGDLTLVHEECLIKWFSLKGNKKCDVCGQEVQNL 267
++ CSCK DL LVH C +KWF G+ C++CG+ +N+
Sbjct: 123 LELGCSCKNDLALVHYACALKWFVNHGSTVCEICGKTTENI 163
>AT5G08750.3 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr5:2852912-2854343 FORWARD LENGTH=370
Length = 370
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 227 FKMECSCKGDLTLVHEECLIKWFSLKGNKKCDVCGQEVQNL 267
++ CSCK DL LVH C +KWF G+ C++CG+ +N+
Sbjct: 130 LELGCSCKNDLALVHYACALKWFVNHGSTVCEICGKTTENI 170
>AT5G01070.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr5:25094-25799 REVERSE LENGTH=206
Length = 206
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 229 MECSCKGDLTLVHEECLIKWFSLKGNKKCDVCGQEVQNL 267
+ CSCK DL VH++C WF +KGNK C++C QN
Sbjct: 98 LGCSCKDDLGYVHKQCADTWFKIKGNKTCEICRSIAQNF 136
>AT5G63780.1 | Symbols: SHA1 | RING/FYVE/PHD zinc finger superfamily
protein | chr5:25525160-25526446 FORWARD LENGTH=367
Length = 367
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 227 FKMECSCKGDLTLVHEECLIKWFSLKGNKKCDVCGQEVQNL 267
++ CSCK +L LVH C +KWF G+ C++CG +N+
Sbjct: 135 LELGCSCKNELALVHYACALKWFLNHGSTVCEICGHPAENI 175