Miyakogusa Predicted Gene

Lj6g3v1915990.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1915990.3 Non Chatacterized Hit- tr|F8L8H1|F8L8H1_SIMNZ
Putative uncharacterized protein OS=Simkania
negevensi,26.89,2e-18,Nucleoside hydrolase,Inosine/uridine-preferring
nucleoside hydrolase domain; no description,Inosine/,CUFF.60164.3
         (437 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G18860.1 | Symbols:  | inosine-uridine preferring nucleoside ...   597   e-171
AT5G18870.1 | Symbols:  | Inosine-uridine preferring nucleoside ...   328   6e-90
AT5G18890.1 | Symbols:  | Inosine-uridine preferring nucleoside ...   124   2e-28
AT1G05620.1 | Symbols: URH2 | uridine-ribohydrolase  2 | chr1:16...    50   2e-06
AT1G05620.2 | Symbols: URH2 | uridine-ribohydrolase  2 | chr1:16...    50   3e-06

>AT5G18860.1 | Symbols:  | inosine-uridine preferring nucleoside
           hydrolase family protein | chr5:6291023-6295581 FORWARD
           LENGTH=890
          Length = 890

 Score =  597 bits (1538), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 288/425 (67%), Positives = 333/425 (78%), Gaps = 7/425 (1%)

Query: 10  ILIMLGTLGVDLHVVEGRPRRIXXXXXXXXXXXXXXXYLLKLNRSEFQLEGITVSANGWT 69
           +  +LG LG +L  V     RI               YLLKLN+SEF L GIT+SAN WT
Sbjct: 13  LFTILGLLGQNLPCVLSSSHRILVDTDVDTDDLFAILYLLKLNKSEFDLVGITLSANAWT 72

Query: 70  NAGHAVNQVYDLLYMMGRDDISVGVGGEGGILPNGTILPNVGGYLPIIEQEMTTAGGCRY 129
           NAGHAVNQVYDLL+MM RDDI VGVGGEGGI  +GTI  +VGGY PIIEQ MTT G CRY
Sbjct: 73  NAGHAVNQVYDLLHMMDRDDIPVGVGGEGGISDDGTIHSDVGGYFPIIEQGMTTTGECRY 132

Query: 130 RQAIPAGLRGLLDIDTNFGIRKAFLPRGKRKYTPLRQPTVQQVLIDKISAGPITVILIGT 189
           RQAIP GL GLLDID+N+G RK FLP+G R+YTPL+QPT Q+V++DKIS GP TVIL+G+
Sbjct: 133 RQAIPKGLGGLLDIDSNYGFRKQFLPQGNRRYTPLQQPTAQKVIVDKISEGPTTVILLGS 192

Query: 190 HTNLAIFLMNNPHLKKNVEHIYIMGGGVRSKNPTGCCPKNAS-SSCITGQCGDRGNLFTD 248
           HTN A+FLM+NPHLK N++HIYIMGGGVRS+NPTGCCP N++ + C   QCG+RGNLFTD
Sbjct: 193 HTNFALFLMSNPHLKHNIQHIYIMGGGVRSQNPTGCCPANSTVAECQPRQCGNRGNLFTD 252

Query: 249 YIANPFAEFNIFGDPFAAYQVIHSGIPVTLVPLDATNTIPISEEFFYEFEKS-QDTYEAQ 307
           Y +NP++EFNIF DPFAAYQV HSG+PVTLVPLDATNTIPI+++FF  FE + Q TYEAQ
Sbjct: 253 YTSNPYSEFNIFADPFAAYQVFHSGVPVTLVPLDATNTIPINQKFFETFENNYQRTYEAQ 312

Query: 308 YCFKSLKMARDTWLDNHFYTSYFMWDSFTCGVAVSIMSSS---NKTKGENEIAEMEYMNI 364
           Y F SLK+ARDTW D+ FY SYFMWDSFT GVAVSIM +S   N   GEN+ AEMEYMNI
Sbjct: 313 YVFLSLKIARDTWFDDEFYKSYFMWDSFTAGVAVSIMRNSANKNNKNGENDFAEMEYMNI 372

Query: 365 TVITSNKPYGISDGSNPFFDGLNVPKFNLKKGGVHSGHVQQGLRDPFCIVKN--GKGKCQ 422
           TV+TSNKPYG SDGSNPFFD    PKFNL  GGVHSGHVQ GLRDP C+ K+  G+GKC+
Sbjct: 373 TVVTSNKPYGRSDGSNPFFDNRRTPKFNLALGGVHSGHVQTGLRDPTCLPKSGIGRGKCK 432

Query: 423 VMYCK 427
             Y +
Sbjct: 433 DGYTQ 437



 Score =  128 bits (322), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 137/287 (47%), Gaps = 55/287 (19%)

Query: 47  YLLKLNRSEFQLEGITVSANGWTNAGHAVNQVYDLLYMMGRDDISVGVGGEGGILPNGTI 106
           YLLK+   +  L+ I VS  GW NA   ++ VYDLL+MMGRDDI VG+G    +  +  I
Sbjct: 527 YLLKVPVDKIDLKAIIVSPTGWANAA-TIDVVYDLLHMMGRDDIPVGLGDMLALNQSDPI 585

Query: 107 LPNVGGYLPIIEQEMTTAGGCRYRQAIPAGLRGLLDIDTNFGIRKAFLPRGKRKYTP--- 163
            P V              GGC+Y +AIP G  G LD DT +G+ +  LPR  R+YT    
Sbjct: 586 FPPV--------------GGCKYVKAIPRGCGGFLDSDTLYGLARD-LPRSPRRYTAENS 630

Query: 164 -------------LRQPTVQQVLIDKISAG----PITVILIGTHTNLAIFLMNNPHLKKN 206
                        LRQP   +V  +   +G     ITV+  G  TNLA  + ++      
Sbjct: 631 VTHGAPRDTDRPELRQPLAIEVWQNLTKSGNGVSKITVLTNGPLTNLAKIISSDKKSSSL 690

Query: 207 VEHIYIMGGGVRSKNPTGCCPKNASSSCITGQCGDRGNLFTDYIANPFAEFNIFGDPFAA 266
           ++ +YI+GG                   I  +  D+GN+FT   +N +AEFN+F DP AA
Sbjct: 691 IKEVYIVGGH------------------INREKSDKGNIFT-IPSNAYAEFNMFLDPLAA 731

Query: 267 YQVIHSGIPVTLVPLDATNTIPISEEFFYEFEKSQDTYEAQYCFKSL 313
             V+ S + +TLVPL   + +   +        S  T EA++  + L
Sbjct: 732 KTVLESALNITLVPLATQHKLSSFQTMLDRLYSSTKTPEARFVKRLL 778


>AT5G18870.1 | Symbols:  | Inosine-uridine preferring nucleoside
           hydrolase family protein | chr5:6298386-6300289 FORWARD
           LENGTH=258
          Length = 258

 Score =  328 bits (840), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 160/269 (59%), Positives = 197/269 (73%), Gaps = 18/269 (6%)

Query: 1   MFSFRIAVVILIMLGTLGVDLHVVEGRPRRIXXXXXXXXXXXXXXXYLLKLNRSEFQLEG 60
           M S R  ++++ +LG LG +L  V   P RI               YLLKLN++EF L G
Sbjct: 1   MLSPRRFILVVTILGLLGHNLTHVLNSPHRILLDTDVDTDDFIALLYLLKLNKTEFDLVG 60

Query: 61  ITVSANGWTNAGHAVNQVYDLLYMMGRDDISVGVGGEGGILPNGTILPNVGGYLPIIEQE 120
           IT+SAN WTNAGH VN +YD+LYMMGRDDI+VGVGGEGGIL +GTILP+VG YLPIIEQ 
Sbjct: 61  ITLSANSWTNAGHGVNHIYDILYMMGRDDITVGVGGEGGILEDGTILPDVGDYLPIIEQG 120

Query: 121 MTTAGGCRYRQAIPAGLRGLLDIDTNFGIRKAFLPRGKRKYTPLRQPTVQQVLIDKISAG 180
           MTTAGGCRYRQ+IP G   +  ID+N+G RK FLP+G R+YTPL QPT Q+V++DK+S G
Sbjct: 121 MTTAGGCRYRQSIPKGR--IQKIDSNYGFRKHFLPQGNRRYTPLEQPTAQKVIVDKVSEG 178

Query: 181 PITVILIGTHTNLAIFLMNNPHLKKNVEHIYIMGGGVRSKNPTGCCPKNASSSCITGQCG 240
           PI++ +IG+HTNLA+F+M+NPHLK N++HIY+MGG VR +NP G C              
Sbjct: 179 PISIFVIGSHTNLALFMMSNPHLKHNIQHIYVMGGSVRCQNPNGFC-------------- 224

Query: 241 DRGNLFTDYIANPFAEFNIFGDPFAAYQV 269
             GNLFTDY +NP+AEFNIF DPFAAYQV
Sbjct: 225 --GNLFTDYTSNPYAEFNIFTDPFAAYQV 251


>AT5G18890.1 | Symbols:  | Inosine-uridine preferring nucleoside
           hydrolase family protein | chr5:6301652-6304088 FORWARD
           LENGTH=550
          Length = 550

 Score =  124 bits (310), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 129/256 (50%), Gaps = 59/256 (23%)

Query: 47  YLLKLNRSEFQLEGITVSANGWTNAGHAVNQVYDLLYMMGRDDISVGVGGEGGILPNGTI 106
           YLLK+      L+ + VS  GW N    ++ VYDLL+MMGRDDI VG+G    I  +  +
Sbjct: 180 YLLKVPVEIIDLKAVIVSPTGWANTA-TIDVVYDLLHMMGRDDIPVGLGDMFAINQSEPV 238

Query: 107 LPNVGGYLPIIEQEMTTAGGCRYRQAIPAGLRGLLDIDTNFGIRKAFLPRGKRKYT---- 162
            P              +AG C+Y +A+P G  G LD DT +G+ +  LPR  R+Y     
Sbjct: 239 FP--------------SAGDCKYAKAVPQGCGGFLDSDTLYGLARD-LPRSPRRYENSVA 283

Query: 163 ----------PLRQPTVQQVL------IDKISAGPITVILIGTHTNLAIFLMNNPHLKKN 206
                      LRQP   +V       +D++S   ITV+  G  T+LA  + ++ +    
Sbjct: 284 HGAPSDTDRPELRQPLALEVWQNLTKSVDEVSK--ITVLTNGPLTSLAKIISSDKNSSSI 341

Query: 207 VEHIYIMGGGV-RSKNPTGCCPKNASSSCITGQCGDRGNLFTDYIANPFAEFNIFGDPFA 265
           ++ +YI+GG + R K+                   D+GN+FT   +N +AEFN+F DP A
Sbjct: 342 IKEVYIVGGHISRGKS-------------------DKGNIFT-VPSNSYAEFNMFLDPLA 381

Query: 266 AYQVIHSGIPVTLVPL 281
           A  V+ SG+ +TL+PL
Sbjct: 382 AKTVLESGLNITLIPL 397



 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 51/76 (67%), Positives = 59/76 (77%)

Query: 352 GENEIAEMEYMNITVITSNKPYGISDGSNPFFDGLNVPKFNLKKGGVHSGHVQQGLRDPF 411
           G+N+ AEMEYMNITV+TSN+PYG+ D SNPFF     PKFNL  GGVHSGHVQ+GLRDP 
Sbjct: 14  GQNDFAEMEYMNITVVTSNEPYGLFDSSNPFFYKRRTPKFNLTLGGVHSGHVQRGLRDPI 73

Query: 412 CIVKNGKGKCQVMYCK 427
           CI  +GKG C+  Y K
Sbjct: 74  CISTSGKGNCRDGYTK 89


>AT1G05620.1 | Symbols: URH2 | uridine-ribohydrolase  2 |
           chr1:1679286-1681527 FORWARD LENGTH=322
          Length = 322

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 77/186 (41%), Gaps = 32/186 (17%)

Query: 155 PRGKRKYTPLRQPTVQQVLIDKISAGPITVILIGTHTNLAIFLMNNPHLKKNVEHIYIMG 214
           P+GK       +  V+Q    K+  G ITV+ +G  TNLA+ +  +P   KNV  I ++G
Sbjct: 101 PKGKPIEKSGPEFLVEQA---KLCPGEITVVALGPLTNLALAVQLDPEFSKNVGQIVLLG 157

Query: 215 GGVRSKNPTGCCPKNASSSCITGQCGDRGNLFTDYIANPFAEFNIFGDPFAAYQVIHSGI 274
           G                           GN+      NP +E NIFGDP AA  V   G 
Sbjct: 158 GAFAV----------------------NGNV------NPASEANIFGDPEAADIVFTCGA 189

Query: 275 PVTLVPLDATNTIPISEEFFYEFEKSQDTYEAQYCFKSLKMARDTWLDNHFYTSYFMWDS 334
            +  V ++ T+ + ++ +   +   S+    AQY  K L +  D  L  +     ++ D 
Sbjct: 190 DIIAVGINVTHQVIMTADDKDKLASSKGKL-AQYLCKILDVYYDYHLTAYEIKGVYLHDP 248

Query: 335 FTCGVA 340
            T   A
Sbjct: 249 ATILAA 254


>AT1G05620.2 | Symbols: URH2 | uridine-ribohydrolase  2 |
           chr1:1679609-1681527 FORWARD LENGTH=302
          Length = 302

 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 77/186 (41%), Gaps = 32/186 (17%)

Query: 155 PRGKRKYTPLRQPTVQQVLIDKISAGPITVILIGTHTNLAIFLMNNPHLKKNVEHIYIMG 214
           P+GK       +  V+Q    K+  G ITV+ +G  TNLA+ +  +P   KNV  I ++G
Sbjct: 81  PKGKPIEKSGPEFLVEQA---KLCPGEITVVALGPLTNLALAVQLDPEFSKNVGQIVLLG 137

Query: 215 GGVRSKNPTGCCPKNASSSCITGQCGDRGNLFTDYIANPFAEFNIFGDPFAAYQVIHSGI 274
           G                           GN+      NP +E NIFGDP AA  V   G 
Sbjct: 138 GAFAV----------------------NGNV------NPASEANIFGDPEAADIVFTCGA 169

Query: 275 PVTLVPLDATNTIPISEEFFYEFEKSQDTYEAQYCFKSLKMARDTWLDNHFYTSYFMWDS 334
            +  V ++ T+ + ++ +   +   S+    AQY  K L +  D  L  +     ++ D 
Sbjct: 170 DIIAVGINVTHQVIMTADDKDKLASSKGKL-AQYLCKILDVYYDYHLTAYEIKGVYLHDP 228

Query: 335 FTCGVA 340
            T   A
Sbjct: 229 ATILAA 234