Miyakogusa Predicted Gene
- Lj6g3v1915980.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1915980.2 Non Chatacterized Hit- tr|I3STW4|I3STW4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.65,0,seg,NULL;
no description,Signal transduction histidine kinase, phosphotransfer
(Hpt) domain; Hpt,Sig,CUFF.60161.2
(149 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G21510.1 | Symbols: AHP1 | histidine-containing phosphotransm... 170 3e-43
AT1G03430.1 | Symbols: AHP5 | histidine-containing phosphotransf... 124 3e-29
AT3G29350.1 | Symbols: AHP2 | histidine-containing phosphotransm... 111 2e-25
AT5G39340.1 | Symbols: AHP3, ATHP2 | histidine-containing phosph... 109 6e-25
AT1G80100.2 | Symbols: AHP6, HP6 | histidine phosphotransfer pro... 90 6e-19
AT1G80100.1 | Symbols: AHP6, HP6 | histidine phosphotransfer pro... 87 4e-18
AT3G16360.2 | Symbols: AHP4 | HPT phosphotransmitter 4 | chr3:55... 87 6e-18
AT3G16360.1 | Symbols: AHP4 | HPT phosphotransmitter 4 | chr3:55... 84 5e-17
AT3G29350.2 | Symbols: AHP2 | histidine-containing phosphotransm... 69 8e-13
>AT3G21510.1 | Symbols: AHP1 | histidine-containing
phosphotransmitter 1 | chr3:7578432-7579537 REVERSE
LENGTH=154
Length = 154
Score = 170 bits (431), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/148 (58%), Positives = 101/148 (68%)
Query: 1 MDAGQMKRQWVDYIKSLFVEXXXXXXXXXXXXXXXENNPXXXXXXXXXXXXXXXRLLKDL 60
MD Q ++ DY KSLF+E E+NP R+L DL
Sbjct: 1 MDLVQKQKSLQDYTKSLFLEGILDSQFLQLQQLQDESNPDFVSQVVTLFFQDSDRILNDL 60
Query: 61 SFALEQKGVDFKKVDAHVHQLKGSSSSIGAQRVKNACIAFRNFCEEQNTDACLRCLQQVK 120
S +L+Q+ VDFKKVD HVHQLKGSSSSIGAQRVKNAC+ FR+FCE+QN +AC RCLQQVK
Sbjct: 61 SLSLDQQVVDFKKVDPHVHQLKGSSSSIGAQRVKNACVVFRSFCEQQNVEACHRCLQQVK 120
Query: 121 QEYCLVKNKLETLIRLEQQIVAAGGSIP 148
QEY LVKN+LETL +LEQQIVA+GG IP
Sbjct: 121 QEYYLVKNRLETLFKLEQQIVASGGMIP 148
>AT1G03430.1 | Symbols: AHP5 | histidine-containing phosphotransfer
factor 5 | chr1:848159-849235 FORWARD LENGTH=157
Length = 157
Score = 124 bits (310), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 89/147 (60%), Gaps = 1/147 (0%)
Query: 3 AGQMKRQWVDYIKSLFVEXXXXXXXXXXXXXXXENNPXXXXXXXXXXXXXXXRLLKDLSF 62
Q++RQ+ DYI SL+ + E P +L+ +S
Sbjct: 6 VAQLQRQFQDYIVSLYQQGFLDNQFSELRKLQDEGTPDFVAEVVSLFFDDCSKLINTMSI 65
Query: 63 ALEQK-GVDFKKVDAHVHQLKGSSSSIGAQRVKNACIAFRNFCEEQNTDACLRCLQQVKQ 121
+LE+ VDFK+VD+ VHQLKGSSSS+GA+RVKN CI+F+ C+ QN + CLRCLQQV
Sbjct: 66 SLERPDNVDFKQVDSGVHQLKGSSSSVGARRVKNVCISFKECCDVQNREGCLRCLQQVDY 125
Query: 122 EYCLVKNKLETLIRLEQQIVAAGGSIP 148
EY ++K KL+ L LE+QI+ AGG+IP
Sbjct: 126 EYKMLKTKLQDLFNLEKQILQAGGTIP 152
>AT3G29350.1 | Symbols: AHP2 | histidine-containing
phosphotransmitter 2 | chr3:11264379-11265408 REVERSE
LENGTH=156
Length = 156
Score = 111 bits (277), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 88/151 (58%), Gaps = 3/151 (1%)
Query: 1 MDA--GQMKRQWVDYIKSLFVEXXXXXXXXXXXXXXXENNPXXXXXXXXXXXXXXXRLLK 58
MDA Q++RQ+ DY SL+ + + +P +L+
Sbjct: 1 MDALIAQLQRQFRDYTISLYQQGFLDDQFTELKKLQDDGSPDFVSEVLSLFFEDCVKLIS 60
Query: 59 DLSFALEQKG-VDFKKVDAHVHQLKGSSSSIGAQRVKNACIAFRNFCEEQNTDACLRCLQ 117
+++ AL+ G VDF +V A VHQLKGSSSS+GA+RVK C++F+ CE +N + C+RCLQ
Sbjct: 61 NMARALDTTGTVDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGCVRCLQ 120
Query: 118 QVKQEYCLVKNKLETLIRLEQQIVAAGGSIP 148
QV EY +K KL+ + LE+QI+ AGG +P
Sbjct: 121 QVDIEYKALKTKLQDMFNLEKQIIQAGGIVP 151
>AT5G39340.1 | Symbols: AHP3, ATHP2 | histidine-containing
phosphotransmitter 3 | chr5:15748941-15750248 FORWARD
LENGTH=155
Length = 155
Score = 109 bits (273), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 84/146 (57%), Gaps = 1/146 (0%)
Query: 4 GQMKRQWVDYIKSLFVEXXXXXXXXXXXXXXXENNPXXXXXXXXXXXXXXXRLLKDLSFA 63
Q++R++ D+ SL+ + E +P +L+ +++ A
Sbjct: 6 AQLQRRFCDFTISLYHQGFLDDQFTELKKLQDECSPDFVAEVVTLFFEDCEKLISNMARA 65
Query: 64 LEQKG-VDFKKVDAHVHQLKGSSSSIGAQRVKNACIAFRNFCEEQNTDACLRCLQQVKQE 122
L+Q G VDFK V + VHQLKGSSSS+GA+RVK C+ + C+ QN + C+RCLQQV E
Sbjct: 66 LDQTGNVDFKLVGSSVHQLKGSSSSVGAKRVKGLCVTLKECCDSQNYEGCVRCLQQVDIE 125
Query: 123 YCLVKNKLETLIRLEQQIVAAGGSIP 148
Y +K KL+ L LEQQIV AGG IP
Sbjct: 126 YKTLKAKLQDLFNLEQQIVQAGGRIP 151
>AT1G80100.2 | Symbols: AHP6, HP6 | histidine phosphotransfer
protein 6 | chr1:30133818-30134652 FORWARD LENGTH=132
Length = 132
Score = 89.7 bits (221), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 61 SFALEQKGVDFKKVDAHVHQLKGSSSSIGAQRVKNACIAFRNFCEEQNTDACLRCLQQVK 120
+F ++++ D+KK+ H++QL GSSSSIGA+RV+N C+AFR+ E N CLR L+ V+
Sbjct: 43 NFVMDREFSDYKKIGLHLNQLVGSSSSIGARRVRNVCVAFRSASELSNRPGCLRGLEVVE 102
Query: 121 QEYCLVKNKLETLIRLEQQ-IVAAGGSIPM 149
EY +KN + L +LEQQ I+AAG PM
Sbjct: 103 HEYHYLKNMMHELFQLEQQRILAAGVRYPM 132
>AT1G80100.1 | Symbols: AHP6, HP6 | histidine phosphotransfer
protein 6 | chr1:30133818-30134652 FORWARD LENGTH=154
Length = 154
Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Query: 70 DFKKVDAHVHQLKGSSSSIGAQRVKNACIAFRNFCEEQNTDACLRCLQQVKQEYCLVKNK 129
D+KK+ H++QL GSSSSIGA+RV+N C+AFR+ E N CLR L+ V+ EY +KN
Sbjct: 74 DYKKIGLHLNQLVGSSSSIGARRVRNVCVAFRSASELSNRPGCLRGLEVVEHEYHYLKNM 133
Query: 130 LETLIRLEQQ-IVAAGGSIPM 149
+ L +LEQQ I+AAG PM
Sbjct: 134 MHELFQLEQQRILAAGVRYPM 154
>AT3G16360.2 | Symbols: AHP4 | HPT phosphotransmitter 4 |
chr3:5554351-5555518 FORWARD LENGTH=145
Length = 145
Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 69/134 (51%)
Query: 6 MKRQWVDYIKSLFVEXXXXXXXXXXXXXXXENNPXXXXXXXXXXXXXXXRLLKDLSFALE 65
M+RQ +SLF + + NP RL+ ++ ALE
Sbjct: 1 MQRQVALIKQSLFDQGYLDEQFMELEELQDDANPNFVEEVSALYFKDSARLINNIDQALE 60
Query: 66 QKGVDFKKVDAHVHQLKGSSSSIGAQRVKNACIAFRNFCEEQNTDACLRCLQQVKQEYCL 125
+ DF ++D+++HQ KGSS+SIGA +VK C FR +C N + CLR QQ+K+E+
Sbjct: 61 RGSFDFNRLDSYMHQFKGSSTSIGASKVKAECTTFREYCRAGNAEGCLRTFQQLKKEHST 120
Query: 126 VKNKLETLIRLEQQ 139
++ KLE +L +Q
Sbjct: 121 LRKKLEHYFQLARQ 134
>AT3G16360.1 | Symbols: AHP4 | HPT phosphotransmitter 4 |
chr3:5554484-5555367 FORWARD LENGTH=127
Length = 127
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 57/101 (56%)
Query: 38 NPXXXXXXXXXXXXXXXRLLKDLSFALEQKGVDFKKVDAHVHQLKGSSSSIGAQRVKNAC 97
NP RL+ ++ ALE+ DF ++D+++HQ KGSS+SIGA +VK C
Sbjct: 27 NPNFVEEVSALYFKDSARLINNIDQALERGSFDFNRLDSYMHQFKGSSTSIGASKVKAEC 86
Query: 98 IAFRNFCEEQNTDACLRCLQQVKQEYCLVKNKLETLIRLEQ 138
FR +C N + CLR QQ+K+E+ ++ KLE + Q
Sbjct: 87 TTFREYCRAGNAEGCLRTFQQLKKEHSTLRKKLEHYFQASQ 127
>AT3G29350.2 | Symbols: AHP2 | histidine-containing
phosphotransmitter 2 | chr3:11264682-11265408 REVERSE
LENGTH=114
Length = 114
Score = 69.3 bits (168), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 1 MDA--GQMKRQWVDYIKSLFVEXXXXXXXXXXXXXXXENNPXXXXXXXXXXXXXXXRLLK 58
MDA Q++RQ+ DY SL+ + + +P +L+
Sbjct: 1 MDALIAQLQRQFRDYTISLYQQGFLDDQFTELKKLQDDGSPDFVSEVLSLFFEDCVKLIS 60
Query: 59 DLSFALEQKG-VDFKKVDAHVHQLKGSSSSIGAQRVKNACIAFRNFCEEQN 108
+++ AL+ G VDF +V A VHQLKGSSSS+GA+RVK C++F+ CE +N
Sbjct: 61 NMARALDTTGTVDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKN 111