Miyakogusa Predicted Gene

Lj6g3v1903460.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1903460.1 Non Chatacterized Hit- tr|I0I929|I0I929_CALAS
Uncharacterized protein OS=Caldilinea aerophila
(strai,27.72,0.00000000001,seg,NULL;
Exo_endo_phos,Endonuclease/exonuclease/phosphatase; DNase
I-like,Endonuclease/exonuclease/,CUFF.60133.1
         (481 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G21530.1 | Symbols:  | DNAse I-like superfamily protein | chr...   476   e-134
AT2G48030.1 | Symbols:  | DNAse I-like superfamily protein | chr...   420   e-117

>AT3G21530.1 | Symbols:  | DNAse I-like superfamily protein |
           chr3:7582828-7584448 REVERSE LENGTH=458
          Length = 458

 Score =  476 bits (1225), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 257/445 (57%), Positives = 308/445 (69%), Gaps = 27/445 (6%)

Query: 1   MLSVIRRKLRNLYSRILWILLKRPRSKVVIKRFRKLKCKGHSRAELCDNKTKTHSNGHLV 60
           ML V RRKL  L+SR+ W++ K+     VI R  +       R E  +++    S+ HL 
Sbjct: 1   MLCVFRRKLGCLFSRLRWVI-KKRVRARVIVRRFRKARWRARRKESPESEV---SSIHL- 55

Query: 61  ESESRRPIRIASFNVAMFSLAPAVSEFDDLIISN--NKSSVKDDFPKSILKQSPLHASLN 118
            S S R IR+A+FNVAMFSLAP V   ++       + S++    PK ILKQSPLH+S  
Sbjct: 56  SSNSGRHIRVATFNVAMFSLAPVVQTMEETAFLGHLDSSNITCPSPKGILKQSPLHSSAV 115

Query: 119 PKAQNHSDSKILPRSNLKVSINLPDNEISLSNSAS-----EKITGSASGRHQVPARSPVC 173
            K               KV INLPDNEISL+ S S     E        R  +  RSPVC
Sbjct: 116 RKP--------------KVCINLPDNEISLAQSYSFLSMVENDNDGKENRGSLSMRSPVC 161

Query: 174 FPFMMNFCEGIEKFSSSSRSILEVLREIDADVVALQDVKAEEEKSMKPLSDLAGALGMKY 233
            P      E    +SS  RSI E+LRE+DAD++ALQDVKAEEE  MKPLSDLA ALGMKY
Sbjct: 162 LPSCWWDQESFNGYSSR-RSIAELLRELDADILALQDVKAEEETLMKPLSDLASALGMKY 220

Query: 234 VFAESWAPEYGNAILSKWPIKRWKVQKIADDDDFRNVLKATIDVPWAGEINFHSTQLDHL 293
           VFAESWAPEYGNAILSKWPIK+W+VQ+IAD DDFRNVLK T+++PWAG++N + TQLDHL
Sbjct: 221 VFAESWAPEYGNAILSKWPIKKWRVQRIADVDDFRNVLKVTVEIPWAGDVNVYCTQLDHL 280

Query: 294 DEHWRMKQVNAIIRSNDPPHILAGGLNSLYGPDYSSERWKDIVRYYEKLGKPKPMTEVMN 353
           DE+WRMKQ++AI R ++ PHIL GGLNSL G DYS  RW  IV+YYE  GKP P  EVM 
Sbjct: 281 DENWRMKQIDAITRGDESPHILLGGLNSLDGSDYSIARWNHIVKYYEDSGKPTPRVEVMR 340

Query: 354 FMRSKAYEDAKDYAGECEPIVIIAKGQNVQGTCKYGTRVDYILGSPNSPYKFVPGSYSVV 413
           F++ K Y D+K++AGECEP+VIIAKGQNVQGTCKYGTRVDYIL SP SPY+FVPGSYSVV
Sbjct: 341 FLKGKGYLDSKEFAGECEPVVIIAKGQNVQGTCKYGTRVDYILASPESPYEFVPGSYSVV 400

Query: 414 SSKGTSDHHIVKVDIMKVNTSAQKN 438
           SSKGTSDHHIVKVD++     ++ N
Sbjct: 401 SSKGTSDHHIVKVDLVITKERSRGN 425


>AT2G48030.1 | Symbols:  | DNAse I-like superfamily protein |
           chr2:19647834-19649988 REVERSE LENGTH=438
          Length = 438

 Score =  420 bits (1080), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 226/397 (56%), Positives = 274/397 (69%), Gaps = 30/397 (7%)

Query: 50  KTKTHSNGH----LVESESRRPIRIASFNVAMFSLAPAVSEFDDLIISNNKSSVKDDFPK 105
           +T  H NG      +     + I +A+FN AMFS+APAV     L    +KS+V  D PK
Sbjct: 34  ETHHHQNGFSSAAAIHPNPDKTITVATFNAAMFSMAPAVPSNKGLPF-RSKSTV--DRPK 90

Query: 106 SILKQSPLHASLNPKAQNHSDSKILPRSNLKVSINLPDNEISLSNSASEKITGSASGRHQ 165
           SILK  P++A+ +P   +    +       +VSINLPDNEIS   S  E           
Sbjct: 91  SILK--PMNAAASPTHDSRKQQRFAKSRPRRVSINLPDNEISRQLSFRED---------- 138

Query: 166 VPARSPVCFPFMMNFCEGIEKFSSSSRSILEVLREIDADVVALQDVKAEEEKSMKPLSDL 225
            P  SP+  P  +           S+R+ LEVL E+DADV+ALQDVKA+E   M+PLSDL
Sbjct: 139 -PQHSPLR-PGEIGL--------RSTRTALEVLSELDADVLALQDVKADEADQMRPLSDL 188

Query: 226 AGALGMKYVFAESWAPEYGNAILSKWPIKRWKVQKIADDDDFRNVLKATIDVPWAGEINF 285
           A ALGM YVFAESWAPEYGNAILSKWPIK   V +I D  DFRNVLKA+I+VP +GE+ F
Sbjct: 189 AAALGMNYVFAESWAPEYGNAILSKWPIKSSNVLRIFDHTDFRNVLKASIEVPGSGEVEF 248

Query: 286 HSTQLDHLDEHWRMKQVNAIIRSNDPPHILAGGLNSLYGPDYSSERWKDIVRYYEKLGKP 345
           H T LDHLDE WRMKQV+AII+S + PHILAG LNSL   DYS ERW DIV+YYE++GKP
Sbjct: 249 HCTHLDHLDEKWRMKQVDAIIQSTNVPHILAGALNSLDESDYSPERWTDIVKYYEEMGKP 308

Query: 346 KPMTEVMNFMRSKAYEDAKDYAGECEPIVIIAKGQNVQGTCKYGTRVDYILGSPNSPYKF 405
            P  +VM F++SK Y DAKD+AGECE +V++AKGQ+VQGTCKYGTRVDYIL S +SPY+F
Sbjct: 309 IPKAQVMRFLKSKEYTDAKDFAGECESVVVVAKGQSVQGTCKYGTRVDYILASSDSPYRF 368

Query: 406 VPGSYSVVSSKGTSDHHIVKVDIMKVNTSAQKNVMKQ 442
           VPGSYSV+SSKGTSDHHIVKVD++K  TS   N  +Q
Sbjct: 369 VPGSYSVLSSKGTSDHHIVKVDVVKA-TSINVNEQEQ 404