Miyakogusa Predicted Gene
- Lj6g3v1901370.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1901370.1 tr|Q3LUS2|Q3LUS2_9ROSI S-adenosylmethionine
decarboxylase 3 (Fragment) OS=Populus maximowiczii x
Pop,66.2,3e-19,SAM_decarbox,S-adenosylmethionine decarboxylase;
S-adenosylmethionine decarboxylase,S-adenosylmethio,CUFF.60127.1
(103 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G18930.1 | Symbols: BUD2, SAMDC4 | Adenosylmethionine decarbo... 115 7e-27
AT5G15950.2 | Symbols: | Adenosylmethionine decarboxylase famil... 88 1e-18
AT5G15950.1 | Symbols: | Adenosylmethionine decarboxylase famil... 88 1e-18
AT3G25570.2 | Symbols: | Adenosylmethionine decarboxylase famil... 87 2e-18
AT3G25570.1 | Symbols: | Adenosylmethionine decarboxylase famil... 87 2e-18
AT3G02470.4 | Symbols: | S-adenosylmethionine decarboxylase | c... 86 5e-18
AT3G02470.3 | Symbols: SAMDC | S-adenosylmethionine decarboxylas... 86 5e-18
AT3G02470.1 | Symbols: SAMDC | S-adenosylmethionine decarboxylas... 86 5e-18
>AT5G18930.1 | Symbols: BUD2, SAMDC4 | Adenosylmethionine
decarboxylase family protein | chr5:6312172-6313215
REVERSE LENGTH=347
Length = 347
Score = 115 bits (288), Expect = 7e-27, Method: Composition-based stats.
Identities = 55/88 (62%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Query: 1 MEICMTDLDPTLARKFFQRPXXXXXXXXXX-XXMTELSGINEINRNALICDFAFDPCGYS 59
+E+CMT+LD AR FF+R MT LSGI+ IN NA ICDFAFDPCGYS
Sbjct: 178 VEVCMTELDRVNARSFFKRKGDEKNNSDSAGKEMTRLSGIDNINANAYICDFAFDPCGYS 237
Query: 60 MNSMDEDWYSTIHVTPEDGYSYASFECA 87
MN +D D YSTIHVTPEDG+SYASFEC
Sbjct: 238 MNGVDGDRYSTIHVTPEDGFSYASFECG 265
>AT5G15950.2 | Symbols: | Adenosylmethionine decarboxylase family
protein | chr5:5206706-5207794 FORWARD LENGTH=362
Length = 362
Score = 88.2 bits (217), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 6/85 (7%)
Query: 1 MEICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCGYSM 60
+E+CMT LD A F++ MT+ SGI +I + ICDF F+PCGYSM
Sbjct: 180 LEMCMTGLDKDKASVFYKN------ESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSM 233
Query: 61 NSMDEDWYSTIHVTPEDGYSYASFE 85
NS++ D STIHVTPEDG+SYASFE
Sbjct: 234 NSIEGDAISTIHVTPEDGFSYASFE 258
>AT5G15950.1 | Symbols: | Adenosylmethionine decarboxylase family
protein | chr5:5206706-5207794 FORWARD LENGTH=362
Length = 362
Score = 88.2 bits (217), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 6/85 (7%)
Query: 1 MEICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCGYSM 60
+E+CMT LD A F++ MT+ SGI +I + ICDF F+PCGYSM
Sbjct: 180 LEMCMTGLDKDKASVFYKN------ESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSM 233
Query: 61 NSMDEDWYSTIHVTPEDGYSYASFE 85
NS++ D STIHVTPEDG+SYASFE
Sbjct: 234 NSIEGDAISTIHVTPEDGFSYASFE 258
>AT3G25570.2 | Symbols: | Adenosylmethionine decarboxylase family
protein | chr3:9287413-9288462 REVERSE LENGTH=349
Length = 349
Score = 87.0 bits (214), Expect = 2e-18, Method: Composition-based stats.
Identities = 45/85 (52%), Positives = 53/85 (62%), Gaps = 6/85 (7%)
Query: 1 MEICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCGYSM 60
+E+CMT LD A FF+ MT SGI I + ICDF F+PCGYSM
Sbjct: 183 LEMCMTGLDNIKASVFFK------TNSVSASEMTISSGIRNILPGSEICDFNFEPCGYSM 236
Query: 61 NSMDEDWYSTIHVTPEDGYSYASFE 85
NS++ D STIHVTPEDG+SYASFE
Sbjct: 237 NSIEGDAVSTIHVTPEDGFSYASFE 261
>AT3G25570.1 | Symbols: | Adenosylmethionine decarboxylase family
protein | chr3:9287413-9288462 REVERSE LENGTH=349
Length = 349
Score = 87.0 bits (214), Expect = 2e-18, Method: Composition-based stats.
Identities = 45/85 (52%), Positives = 53/85 (62%), Gaps = 6/85 (7%)
Query: 1 MEICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCGYSM 60
+E+CMT LD A FF+ MT SGI I + ICDF F+PCGYSM
Sbjct: 183 LEMCMTGLDNIKASVFFK------TNSVSASEMTISSGIRNILPGSEICDFNFEPCGYSM 236
Query: 61 NSMDEDWYSTIHVTPEDGYSYASFE 85
NS++ D STIHVTPEDG+SYASFE
Sbjct: 237 NSIEGDAVSTIHVTPEDGFSYASFE 261
>AT3G02470.4 | Symbols: | S-adenosylmethionine decarboxylase |
chr3:510223-511323 FORWARD LENGTH=366
Length = 366
Score = 85.9 bits (211), Expect = 5e-18, Method: Composition-based stats.
Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 6/85 (7%)
Query: 1 MEICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCGYSM 60
+E+CMT LD A F++ MT+ SGI +I + ICDF F+PCGYSM
Sbjct: 181 LEMCMTGLDREKAAVFYK------DEADKTGSMTDNSGIRKILPKSEICDFEFEPCGYSM 234
Query: 61 NSMDEDWYSTIHVTPEDGYSYASFE 85
NS++ D STIHVTPEDG+SYASFE
Sbjct: 235 NSIEGDAISTIHVTPEDGFSYASFE 259
>AT3G02470.3 | Symbols: SAMDC | S-adenosylmethionine decarboxylase |
chr3:510223-511323 FORWARD LENGTH=366
Length = 366
Score = 85.9 bits (211), Expect = 5e-18, Method: Composition-based stats.
Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 6/85 (7%)
Query: 1 MEICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCGYSM 60
+E+CMT LD A F++ MT+ SGI +I + ICDF F+PCGYSM
Sbjct: 181 LEMCMTGLDREKAAVFYK------DEADKTGSMTDNSGIRKILPKSEICDFEFEPCGYSM 234
Query: 61 NSMDEDWYSTIHVTPEDGYSYASFE 85
NS++ D STIHVTPEDG+SYASFE
Sbjct: 235 NSIEGDAISTIHVTPEDGFSYASFE 259
>AT3G02470.1 | Symbols: SAMDC | S-adenosylmethionine decarboxylase |
chr3:510223-511323 FORWARD LENGTH=366
Length = 366
Score = 85.9 bits (211), Expect = 5e-18, Method: Composition-based stats.
Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 6/85 (7%)
Query: 1 MEICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCGYSM 60
+E+CMT LD A F++ MT+ SGI +I + ICDF F+PCGYSM
Sbjct: 181 LEMCMTGLDREKAAVFYK------DEADKTGSMTDNSGIRKILPKSEICDFEFEPCGYSM 234
Query: 61 NSMDEDWYSTIHVTPEDGYSYASFE 85
NS++ D STIHVTPEDG+SYASFE
Sbjct: 235 NSIEGDAISTIHVTPEDGFSYASFE 259