Miyakogusa Predicted Gene

Lj6g3v1900290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1900290.1 Non Chatacterized Hit- tr|I0Z071|I0Z071_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,28.66,6e-18,MATE EFFLUX FAMILY PROTEIN,NULL; MULTIDRUG RESISTANCE
PROTEIN,NULL; seg,NULL; MatE,Multi antimicrobi,gene.g66910.t1.1
         (397 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G21340.1 | Symbols:  | MATE efflux family protein | chr2:9132...   494   e-140
AT2G21340.2 | Symbols:  | MATE efflux family protein | chr2:9132...   489   e-138
AT4G39030.1 | Symbols: EDS5, SID1 | MATE efflux family protein |...   460   e-130
AT2G38330.1 | Symbols:  | MATE efflux family protein | chr2:1606...    75   7e-14
AT3G08040.2 | Symbols: FRD3, MAN1, ATFRD3 | MATE efflux family p...    50   2e-06
AT3G08040.1 | Symbols: FRD3, MAN1, ATFRD3 | MATE efflux family p...    50   2e-06

>AT2G21340.1 | Symbols:  | MATE efflux family protein |
           chr2:9132629-9136236 FORWARD LENGTH=559
          Length = 559

 Score =  494 bits (1271), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 249/443 (56%), Positives = 301/443 (67%), Gaps = 49/443 (11%)

Query: 1   MKEIVKFTGPVAGIWLCGPLMSLIDTAVVGQGSSVELAALGPATVFCDYLSYTFMFLSVA 60
           MKEIV FTGP AG+WLCGPLMSLIDTAV+GQGSS+ELAALGPATV CDYL YTFMFLSVA
Sbjct: 116 MKEIVMFTGPAAGLWLCGPLMSLIDTAVIGQGSSLELAALGPATVICDYLCYTFMFLSVA 175

Query: 61  TSNMVATAVAKQDREEVQHHISVLLFIGLGCGLVMXXXXXXXXXXXXXXXXXXKNVHVVP 120
           TSN+VAT++A+QD++EVQH IS+LLFIGL CG+ M                  KN  +VP
Sbjct: 176 TSNLVATSLARQDKDEVQHQISILLFIGLACGVTMMVLTRLFGSWALTAFTGVKNADIVP 235

Query: 121 AANTYVQIRGLAWPALLIGWVAQSASLGMKDSWGPLKALAAASVINGIGDIVLCTYLGYG 180
           AAN YVQIRGLAWPA+LIGWVAQSASLGMKDSWGPLKALA AS ING+GD+VLCT+LGYG
Sbjct: 236 AANKYVQIRGLAWPAVLIGWVAQSASLGMKDSWGPLKALAVASAINGVGDVVLCTFLGYG 295

Query: 181 IAGAAWATLASQVVAAYMMSQTLNNKGYNAFAFSIPSAKEFFTILSISAPVFVTLLSKVI 240
           IAGAAWAT+ SQVVAAYMM   LN KGY+AF+F +PS  E  TI  ++APVF+T++SKV+
Sbjct: 296 IAGAAWATMVSQVVAAYMMMDALNKKGYSAFSFCVPSPSELLTIFGLAAPVFITMMSKVL 355

Query: 241 -----------------------VQIYMACTLFGEPLSQTAQSFMPELMYGVNXXXXXXX 277
                                  +QIY   T++GEPLSQTAQSFMPEL++G+N       
Sbjct: 356 FYTLLVYFATSMGTNIIAAHQVMLQIYTMSTVWGEPLSQTAQSFMPELLFGINRNLPKAR 415

Query: 278 XXXXXXXXXXXXXXXXXXXXXTSVPWLFPYIFTSDQMVIQEMHRILIPYFVALSVTPTIV 337
                                T+VPWLFP IFT D++V  EMH+++IPYF+ALS+TP+  
Sbjct: 416 VLLKSLVIIGATLGIVVGTIGTAVPWLFPGIFTRDKVVTSEMHKVIIPYFLALSITPSTH 475

Query: 338 GLEGT-------------------------MLTLSSRYGLQGCWFALAGFQWTRFLSALL 372
            LEGT                         ML  +  +GL+GCW+AL GFQW RF  +L 
Sbjct: 476 SLEGTLLAGRDLRYISLSMTGCLAVAGLLLMLLSNGGFGLRGCWYALVGFQWARFSLSLF 535

Query: 373 RLLSPNGILFSEDLGQYELQKLK 395
           RLLS +G+L+SED  +Y  +K+K
Sbjct: 536 RLLSRDGVLYSEDTSRYA-EKVK 557


>AT2G21340.2 | Symbols:  | MATE efflux family protein |
           chr2:9132629-9136236 FORWARD LENGTH=556
          Length = 556

 Score =  489 bits (1260), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 249/443 (56%), Positives = 301/443 (67%), Gaps = 52/443 (11%)

Query: 1   MKEIVKFTGPVAGIWLCGPLMSLIDTAVVGQGSSVELAALGPATVFCDYLSYTFMFLSVA 60
           MKEIV FTGP AG+WLCGPLMSLIDTAV+GQGSS+ELAALGPATV CDYL YTFMFLSVA
Sbjct: 116 MKEIVMFTGPAAGLWLCGPLMSLIDTAVIGQGSSLELAALGPATVICDYLCYTFMFLSVA 175

Query: 61  TSNMVATAVAKQDREEVQHHISVLLFIGLGCGLVMXXXXXXXXXXXXXXXXXXKNVHVVP 120
           TSN+VAT++A+QD++EVQH IS+LLFIGL CG+ M                  KN  +VP
Sbjct: 176 TSNLVATSLARQDKDEVQHQISILLFIGLACGVTMMVLTRLFGSWALTGV---KNADIVP 232

Query: 121 AANTYVQIRGLAWPALLIGWVAQSASLGMKDSWGPLKALAAASVINGIGDIVLCTYLGYG 180
           AAN YVQIRGLAWPA+LIGWVAQSASLGMKDSWGPLKALA AS ING+GD+VLCT+LGYG
Sbjct: 233 AANKYVQIRGLAWPAVLIGWVAQSASLGMKDSWGPLKALAVASAINGVGDVVLCTFLGYG 292

Query: 181 IAGAAWATLASQVVAAYMMSQTLNNKGYNAFAFSIPSAKEFFTILSISAPVFVTLLSKVI 240
           IAGAAWAT+ SQVVAAYMM   LN KGY+AF+F +PS  E  TI  ++APVF+T++SKV+
Sbjct: 293 IAGAAWATMVSQVVAAYMMMDALNKKGYSAFSFCVPSPSELLTIFGLAAPVFITMMSKVL 352

Query: 241 -----------------------VQIYMACTLFGEPLSQTAQSFMPELMYGVNXXXXXXX 277
                                  +QIY   T++GEPLSQTAQSFMPEL++G+N       
Sbjct: 353 FYTLLVYFATSMGTNIIAAHQVMLQIYTMSTVWGEPLSQTAQSFMPELLFGINRNLPKAR 412

Query: 278 XXXXXXXXXXXXXXXXXXXXXTSVPWLFPYIFTSDQMVIQEMHRILIPYFVALSVTPTIV 337
                                T+VPWLFP IFT D++V  EMH+++IPYF+ALS+TP+  
Sbjct: 413 VLLKSLVIIGATLGIVVGTIGTAVPWLFPGIFTRDKVVTSEMHKVIIPYFLALSITPSTH 472

Query: 338 GLEGT-------------------------MLTLSSRYGLQGCWFALAGFQWTRFLSALL 372
            LEGT                         ML  +  +GL+GCW+AL GFQW RF  +L 
Sbjct: 473 SLEGTLLAGRDLRYISLSMTGCLAVAGLLLMLLSNGGFGLRGCWYALVGFQWARFSLSLF 532

Query: 373 RLLSPNGILFSEDLGQYELQKLK 395
           RLLS +G+L+SED  +Y  +K+K
Sbjct: 533 RLLSRDGVLYSEDTSRYA-EKVK 554


>AT4G39030.1 | Symbols: EDS5, SID1 | MATE efflux family protein |
           chr4:18185740-18188898 FORWARD LENGTH=543
          Length = 543

 Score =  460 bits (1184), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 234/444 (52%), Positives = 291/444 (65%), Gaps = 48/444 (10%)

Query: 1   MKEIVKFTGPVAGIWLCGPLMSLIDTAVVGQGSSVELAALGPATVFCDYLSYTFMFLSVA 60
           MKEIVKFTGP  G+W+CGPLMSLIDT V+GQGSS+ELAALGP TV CD++SY FMFLSVA
Sbjct: 99  MKEIVKFTGPAMGMWICGPLMSLIDTVVIGQGSSIELAALGPGTVLCDHMSYVFMFLSVA 158

Query: 61  TSNMVATAVAKQDREEVQHHISVLLFIGLGCGLVMXXXXXXXXXXXXXXXXXXKNVHVVP 120
           TSNMVAT++AKQD++E QH ISVLLFIGL CGL+M                  KN+ +VP
Sbjct: 159 TSNMVATSLAKQDKKEAQHQISVLLFIGLVCGLMMLLLTRLFGPWAVTAFTRGKNIEIVP 218

Query: 121 AANTYVQIRGLAWPALLIGWVAQSASLGMKDSWGPLKALAAASVINGIGDIVLCTYLGYG 180
           AAN Y+QIRGLAWP +L+G VAQSASLGMK+SWGPLKALAAA++ING+GD +LC +LG G
Sbjct: 219 AANKYIQIRGLAWPFILVGLVAQSASLGMKNSWGPLKALAAATIINGLGDTILCLFLGQG 278

Query: 181 IAGAAWATLASQVVAAYMMSQTLNNKGYNAFAFSIPSAKEFFTILSISAPVFVTLLSK-- 238
           IAGAAWAT ASQ+V+AYMM  +LN +GYNA++F+IPS +E + I +++APVF+++ SK  
Sbjct: 279 IAGAAWATTASQIVSAYMMMDSLNKEGYNAYSFAIPSPQELWKISALAAPVFISIFSKIA 338

Query: 239 ---------------------VIVQIYMACTLFGEPLSQTAQSFMPELMYGVNXXXXXXX 277
                                V+ Q Y  C ++GEPLSQTAQSFMPE++YG N       
Sbjct: 339 FYSFIIYCATSMGTHVLAAHQVMAQTYRMCNVWGEPLSQTAQSFMPEMLYGANRNLPKAR 398

Query: 278 XXXXXXXXXXXXXXXXXXXXXTSVPWLFPYIFTSDQMVIQEMHRILIPYFVALSVTPTIV 337
                                T+VP LFP ++T D+++I EMHR+LIP+F+ALS  P  V
Sbjct: 399 TLLKSLMIIGATLGLVLGVIGTAVPGLFPGVYTHDKVIISEMHRLLIPFFMALSALPMTV 458

Query: 338 GLEGTML-------------------------TLSSRYGLQGCWFALAGFQWTRFLSALL 372
            LEGT+L                            S YGL GCWF L GFQW RF   L 
Sbjct: 459 SLEGTLLAGRDLKFVSSVMSSSFIIGCLTLMFVTRSGYGLLGCWFVLVGFQWGRFGLYLR 518

Query: 373 RLLSPNGILFSEDLGQYELQKLKT 396
           RLLSP GIL S+    Y ++K+K+
Sbjct: 519 RLLSPGGILNSDGPSPYTVEKIKS 542


>AT2G38330.1 | Symbols:  | MATE efflux family protein |
           chr2:16064571-16067318 FORWARD LENGTH=521
          Length = 521

 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 10/198 (5%)

Query: 19  PLMSLIDTAVVGQGSSVELAALGPATVFCDYLSYTFM--FLSVATSNMVATAV--AKQDR 74
           P+ SL+DTA VG   S ELAA+G +    + +S  F    L+V TS +       AK D 
Sbjct: 95  PITSLVDTAFVGHIGSAELAAVGVSVSVFNLVSKLFNVPLLNVTTSFVAEEQAIAAKDDN 154

Query: 75  EEVQHHISVL------LFIGLGCGLVMXXXXXXXXXXXXXXXXXXKNVHVVPAANTYVQI 128
           + ++    VL      L +  G G+                     +  +   A  ++++
Sbjct: 155 DSIETSKKVLPSVSTSLVLAAGVGIAEAIALSLGSDFLMDVMAIPFDSPMRIPAEQFLRL 214

Query: 129 RGLAWPALLIGWVAQSASLGMKDSWGPLKALAAASVINGIGDIVLCTYLGYGIAGAAWAT 188
           R    P +++   AQ A  G KD+  PL A+ A +V+N + D +L   LG+GI+GAA AT
Sbjct: 215 RAYGAPPIVVALAAQGAFRGFKDTTTPLYAVVAGNVLNAVLDPILIFVLGFGISGAAAAT 274

Query: 189 LASQVVAAYMMSQTLNNK 206
           + S+ + A+++   LN  
Sbjct: 275 VISEYLIAFILLWKLNEN 292


>AT3G08040.2 | Symbols: FRD3, MAN1, ATFRD3 | MATE efflux family
           protein | chr3:2566593-2569397 REVERSE LENGTH=526
          Length = 526

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 54/124 (43%), Gaps = 2/124 (1%)

Query: 71  KQDREEVQ--HHISVLLFIGLGCGLVMXXXXXXXXXXXXXXXXXXKNVHVVPAANTYVQI 128
           K +++E +     S  + +GL  GLV                    N  ++  A+ Y+ I
Sbjct: 159 KSNKKEKRTIRTASTAMILGLILGLVQAIFLIFSSKLLLGVMGVKPNSPMLSPAHKYLSI 218

Query: 129 RGLAWPALLIGWVAQSASLGMKDSWGPLKALAAASVINGIGDIVLCTYLGYGIAGAAWAT 188
           R L  PALL+    Q    G KD+  PL A   A VIN + D +    L  GI GAA A 
Sbjct: 219 RALGAPALLLSLAMQGIFRGFKDTKTPLFATVVADVINIVLDPIFIFVLRLGIIGAAIAH 278

Query: 189 LASQ 192
           + SQ
Sbjct: 279 VISQ 282


>AT3G08040.1 | Symbols: FRD3, MAN1, ATFRD3 | MATE efflux family
           protein | chr3:2566593-2569397 REVERSE LENGTH=526
          Length = 526

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 54/124 (43%), Gaps = 2/124 (1%)

Query: 71  KQDREEVQ--HHISVLLFIGLGCGLVMXXXXXXXXXXXXXXXXXXKNVHVVPAANTYVQI 128
           K +++E +     S  + +GL  GLV                    N  ++  A+ Y+ I
Sbjct: 159 KSNKKEKRTIRTASTAMILGLILGLVQAIFLIFSSKLLLGVMGVKPNSPMLSPAHKYLSI 218

Query: 129 RGLAWPALLIGWVAQSASLGMKDSWGPLKALAAASVINGIGDIVLCTYLGYGIAGAAWAT 188
           R L  PALL+    Q    G KD+  PL A   A VIN + D +    L  GI GAA A 
Sbjct: 219 RALGAPALLLSLAMQGIFRGFKDTKTPLFATVVADVINIVLDPIFIFVLRLGIIGAAIAH 278

Query: 189 LASQ 192
           + SQ
Sbjct: 279 VISQ 282