Miyakogusa Predicted Gene

Lj6g3v1900270.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1900270.1 tr|B5Y5D7|B5Y5D7_PHATC Predicted protein
OS=Phaeodactylum tricornutum (strain CCAP 1055/1)
GN=PHATR_,39.56,2e-18,seg,NULL; MATE EFFLUX FAMILY PROTEIN,NULL;
MULTIDRUG RESISTANCE PROTEIN,NULL; MatE,Multi
antimicrobi,NODE_56667_length_2020_cov_35.715843.path2.1
         (528 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G21340.1 | Symbols:  | MATE efflux family protein | chr2:9132...   577   e-165
AT2G21340.2 | Symbols:  | MATE efflux family protein | chr2:9132...   567   e-162
AT4G39030.1 | Symbols: EDS5, SID1 | MATE efflux family protein |...   528   e-150
AT2G38330.1 | Symbols:  | MATE efflux family protein | chr2:1606...   101   1e-21
AT4G38380.1 | Symbols:  | MATE efflux family protein | chr4:1797...    66   7e-11
AT3G08040.2 | Symbols: FRD3, MAN1, ATFRD3 | MATE efflux family p...    60   5e-09
AT3G08040.1 | Symbols: FRD3, MAN1, ATFRD3 | MATE efflux family p...    60   5e-09

>AT2G21340.1 | Symbols:  | MATE efflux family protein |
           chr2:9132629-9136236 FORWARD LENGTH=559
          Length = 559

 Score =  577 bits (1487), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 278/455 (61%), Positives = 345/455 (75%), Gaps = 3/455 (0%)

Query: 77  KELAEQSVWSQTKEIVKFTAPAMGLWLCDPLMSLIDTAVVAHGSSTELAALGPATVVCDY 136
            +LA QS+W Q KEIV FT PA GLWLC PLMSLIDTAV+  GSS ELAALGPATV+CDY
Sbjct: 105 DDLATQSIWGQMKEIVMFTGPAAGLWLCGPLMSLIDTAVIGQGSSLELAALGPATVICDY 164

Query: 137 MTLTFMFLSVVTSNIIATALAKQDEEGVQHHLSVLLFVGLACGCVMLLSTKLFGAAALTV 196
           +  TFMFLSV TSN++AT+LA+QD++ VQH +S+LLF+GLACG  M++ T+LFG+ ALT 
Sbjct: 165 LCYTFMFLSVATSNLVATSLARQDKDEVQHQISILLFIGLACGVTMMVLTRLFGSWALTA 224

Query: 197 FTGPKNVHVVPAANTYVQIRALSWPALLVGWVAQSASLGMKDSWGPLKALAAASIINGVG 256
           FTG KN  +VPAAN YVQIR L+WPA+L+GWVAQSASLGMKDSWGPLKALA AS INGVG
Sbjct: 225 FTGVKNADIVPAANKYVQIRGLAWPAVLIGWVAQSASLGMKDSWGPLKALAVASAINGVG 284

Query: 257 DILLCSCLGYGIAGAAWATMASQVVAAYMMIQALNNKGYNALAFSIPTRKEFLKILGLAA 316
           D++LC+ LGYGIAGAAWATM SQVVAAYMM+ ALN KGY+A +F +P+  E L I GLAA
Sbjct: 285 DVVLCTFLGYGIAGAAWATMVSQVVAAYMMMDALNKKGYSAFSFCVPSPSELLTIFGLAA 344

Query: 317 PVYVTSISKVAFFSLLIYVSTSMGTQTIAAHQVMIQIYMACTVWGEPLCQTAQSYMPELM 376
           PV++T +SKV F++LL+Y +TSMGT  IAAHQVM+QIY   TVWGEPL QTAQS+MPEL+
Sbjct: 345 PVFITMMSKVLFYTLLVYFATSMGTNIIAAHQVMLQIYTMSTVWGEPLSQTAQSFMPELL 404

Query: 377 YGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPYIFTPDQMVIQKMHRTLIPF 436
           +G+N                                  FP IFT D++V  +MH+ +IP+
Sbjct: 405 FGINRNLPKARVLLKSLVIIGATLGIVVGTIGTAVPWLFPGIFTRDKVVTSEMHKVIIPY 464

Query: 437 FLALAVTPPTRSLEGTLLAGQDLRFISLSTCGCFCLGALVLLIFSR--YGLLGCWFTLAG 494
           FLAL++TP T SLEGTLLAG+DLR+ISLS  GC  +  L+L++ S   +GL GCW+ L G
Sbjct: 465 FLALSITPSTHSLEGTLLAGRDLRYISLSMTGCLAVAGLLLMLLSNGGFGLRGCWYALVG 524

Query: 495 FQWARFLVALLRLLSPSGILQTEET-RISQKLRTA 528
           FQWARF ++L RLLS  G+L +E+T R ++K++ A
Sbjct: 525 FQWARFSLSLFRLLSRDGVLYSEDTSRYAEKVKAA 559


>AT2G21340.2 | Symbols:  | MATE efflux family protein |
           chr2:9132629-9136236 FORWARD LENGTH=556
          Length = 556

 Score =  567 bits (1461), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 276/455 (60%), Positives = 343/455 (75%), Gaps = 6/455 (1%)

Query: 77  KELAEQSVWSQTKEIVKFTAPAMGLWLCDPLMSLIDTAVVAHGSSTELAALGPATVVCDY 136
            +LA QS+W Q KEIV FT PA GLWLC PLMSLIDTAV+  GSS ELAALGPATV+CDY
Sbjct: 105 DDLATQSIWGQMKEIVMFTGPAAGLWLCGPLMSLIDTAVIGQGSSLELAALGPATVICDY 164

Query: 137 MTLTFMFLSVVTSNIIATALAKQDEEGVQHHLSVLLFVGLACGCVMLLSTKLFGAAALTV 196
           +  TFMFLSV TSN++AT+LA+QD++ VQH +S+LLF+GLACG  M++ T+LFG+ ALT 
Sbjct: 165 LCYTFMFLSVATSNLVATSLARQDKDEVQHQISILLFIGLACGVTMMVLTRLFGSWALT- 223

Query: 197 FTGPKNVHVVPAANTYVQIRALSWPALLVGWVAQSASLGMKDSWGPLKALAAASIINGVG 256
             G KN  +VPAAN YVQIR L+WPA+L+GWVAQSASLGMKDSWGPLKALA AS INGVG
Sbjct: 224 --GVKNADIVPAANKYVQIRGLAWPAVLIGWVAQSASLGMKDSWGPLKALAVASAINGVG 281

Query: 257 DILLCSCLGYGIAGAAWATMASQVVAAYMMIQALNNKGYNALAFSIPTRKEFLKILGLAA 316
           D++LC+ LGYGIAGAAWATM SQVVAAYMM+ ALN KGY+A +F +P+  E L I GLAA
Sbjct: 282 DVVLCTFLGYGIAGAAWATMVSQVVAAYMMMDALNKKGYSAFSFCVPSPSELLTIFGLAA 341

Query: 317 PVYVTSISKVAFFSLLIYVSTSMGTQTIAAHQVMIQIYMACTVWGEPLCQTAQSYMPELM 376
           PV++T +SKV F++LL+Y +TSMGT  IAAHQVM+QIY   TVWGEPL QTAQS+MPEL+
Sbjct: 342 PVFITMMSKVLFYTLLVYFATSMGTNIIAAHQVMLQIYTMSTVWGEPLSQTAQSFMPELL 401

Query: 377 YGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPYIFTPDQMVIQKMHRTLIPF 436
           +G+N                                  FP IFT D++V  +MH+ +IP+
Sbjct: 402 FGINRNLPKARVLLKSLVIIGATLGIVVGTIGTAVPWLFPGIFTRDKVVTSEMHKVIIPY 461

Query: 437 FLALAVTPPTRSLEGTLLAGQDLRFISLSTCGCFCLGALVLLIFSR--YGLLGCWFTLAG 494
           FLAL++TP T SLEGTLLAG+DLR+ISLS  GC  +  L+L++ S   +GL GCW+ L G
Sbjct: 462 FLALSITPSTHSLEGTLLAGRDLRYISLSMTGCLAVAGLLLMLLSNGGFGLRGCWYALVG 521

Query: 495 FQWARFLVALLRLLSPSGILQTEET-RISQKLRTA 528
           FQWARF ++L RLLS  G+L +E+T R ++K++ A
Sbjct: 522 FQWARFSLSLFRLLSRDGVLYSEDTSRYAEKVKAA 556


>AT4G39030.1 | Symbols: EDS5, SID1 | MATE efflux family protein |
           chr4:18185740-18188898 FORWARD LENGTH=543
          Length = 543

 Score =  528 bits (1360), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 259/442 (58%), Positives = 324/442 (73%), Gaps = 2/442 (0%)

Query: 78  ELAEQSVWSQTKEIVKFTAPAMGLWLCDPLMSLIDTAVVAHGSSTELAALGPATVVCDYM 137
           +L +QS+W Q KEIVKFT PAMG+W+C PLMSLIDT V+  GSS ELAALGP TV+CD+M
Sbjct: 89  DLVKQSIWEQMKEIVKFTGPAMGMWICGPLMSLIDTVVIGQGSSIELAALGPGTVLCDHM 148

Query: 138 TLTFMFLSVVTSNIIATALAKQDEEGVQHHLSVLLFVGLACGCVMLLSTKLFGAAALTVF 197
           +  FMFLSV TSN++AT+LAKQD++  QH +SVLLF+GL CG +MLL T+LFG  A+T F
Sbjct: 149 SYVFMFLSVATSNMVATSLAKQDKKEAQHQISVLLFIGLVCGLMMLLLTRLFGPWAVTAF 208

Query: 198 TGPKNVHVVPAANTYVQIRALSWPALLVGWVAQSASLGMKDSWGPLKALAAASIINGVGD 257
           T  KN+ +VPAAN Y+QIR L+WP +LVG VAQSASLGMK+SWGPLKALAAA+IING+GD
Sbjct: 209 TRGKNIEIVPAANKYIQIRGLAWPFILVGLVAQSASLGMKNSWGPLKALAAATIINGLGD 268

Query: 258 ILLCSCLGYGIAGAAWATMASQVVAAYMMIQALNNKGYNALAFSIPTRKEFLKILGLAAP 317
            +LC  LG GIAGAAWAT ASQ+V+AYMM+ +LN +GYNA +F+IP+ +E  KI  LAAP
Sbjct: 269 TILCLFLGQGIAGAAWATTASQIVSAYMMMDSLNKEGYNAYSFAIPSPQELWKISALAAP 328

Query: 318 VYVTSISKVAFFSLLIYVSTSMGTQTIAAHQVMIQIYMACTVWGEPLCQTAQSYMPELMY 377
           V+++  SK+AF+S +IY +TSMGT  +AAHQVM Q Y  C VWGEPL QTAQS+MPE++Y
Sbjct: 329 VFISIFSKIAFYSFIIYCATSMGTHVLAAHQVMAQTYRMCNVWGEPLSQTAQSFMPEMLY 388

Query: 378 GVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPYIFTPDQMVIQKMHRTLIPFF 437
           G N                                  FP ++T D+++I +MHR LIPFF
Sbjct: 389 GANRNLPKARTLLKSLMIIGATLGLVLGVIGTAVPGLFPGVYTHDKVIISEMHRLLIPFF 448

Query: 438 LALAVTPPTRSLEGTLLAGQDLRFISLSTCGCFCLGALVLLIFSR--YGLLGCWFTLAGF 495
           +AL+  P T SLEGTLLAG+DL+F+S      F +G L L+  +R  YGLLGCWF L GF
Sbjct: 449 MALSALPMTVSLEGTLLAGRDLKFVSSVMSSSFIIGCLTLMFVTRSGYGLLGCWFVLVGF 508

Query: 496 QWARFLVALLRLLSPSGILQTE 517
           QW RF + L RLLSP GIL ++
Sbjct: 509 QWGRFGLYLRRLLSPGGILNSD 530


>AT2G38330.1 | Symbols:  | MATE efflux family protein |
           chr2:16064571-16067318 FORWARD LENGTH=521
          Length = 521

 Score =  101 bits (251), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 175/374 (46%), Gaps = 33/374 (8%)

Query: 17  SPFKNPNLFASPPSNHRHLPLRFRPAPSLIHSPSIRRRTGIVTASVVGGGYDE----SEE 72
           SP ++P+ F +P S+ R          +++   S R  +  V+ S       +    S+ 
Sbjct: 11  SPHRSPSRFGNPNSSIRR---------TIVCKSSPRDESPAVSTSSQRPEKQQNPLTSQN 61

Query: 73  VVEKKELAEQSVWSQTKEIVKFTAPAMGLWLCDPLMSLIDTAVVAHGSSTELAALGPATV 132
             +     +  +     EI+    PA      DP+ SL+DTA V H  S ELAA+G +  
Sbjct: 62  KPDHDHKPDPGIGKIGMEIMSIALPAALALAADPITSLVDTAFVGHIGSAELAAVGVSVS 121

Query: 133 VCDYMTLTFM--FLSVVTSNIIATAL--AKQDEEGVQHHLSVL------LFVGLACGCVM 182
           V + ++  F    L+V TS +       AK D + ++    VL      L +    G   
Sbjct: 122 VFNLVSKLFNVPLLNVTTSFVAEEQAIAAKDDNDSIETSKKVLPSVSTSLVLAAGVGIAE 181

Query: 183 LLSTKLFGAAALTVFTGPKNVHVVPAANTYVQIRALSWPALLVGWVAQSASLGMKDSWGP 242
            ++  L     + V   P +  +   A  ++++RA   P ++V   AQ A  G KD+  P
Sbjct: 182 AIALSLGSDFLMDVMAIPFDSPMRIPAEQFLRLRAYGAPPIVVALAAQGAFRGFKDTTTP 241

Query: 243 LKALAAASIINGVGDILLCSCLGYGIAGAAWATMASQVVAAYMMIQALNNKGYNALAFS- 301
           L A+ A +++N V D +L   LG+GI+GAA AT+ S+ + A++++  LN    N +  S 
Sbjct: 242 LYAVVAGNVLNAVLDPILIFVLGFGISGAAAATVISEYLIAFILLWKLNE---NVVLLSP 298

Query: 302 ---IPTRKEFLKILGLAAPVYVTSISKVAFFSLLIYVSTSMGTQTIAAHQVMIQIYMACT 358
              +    ++LK  GL   +   +++ +  F+L   ++   G   +A HQ++++I++A +
Sbjct: 299 QIKVGRANQYLKSGGL---LIGRTVALLVPFTLATSLAAQNGPTQMAGHQIVLEIWLAVS 355

Query: 359 VWGEPLCQTAQSYM 372
           +  + L   AQS +
Sbjct: 356 LLTDALAIAAQSLL 369


>AT4G38380.1 | Symbols:  | MATE efflux family protein |
           chr4:17971855-17974787 REVERSE LENGTH=560
          Length = 560

 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 82/322 (25%), Positives = 140/322 (43%), Gaps = 62/322 (19%)

Query: 89  KEIVKFTAPAMGLWLCDPLMSLIDTAVVAHGSSTELAALGPATVVCDYMTLTFM--FLSV 146
           +E+V  + PA+     DPL  L++TA +    S EL + G +  + + ++  F    LSV
Sbjct: 107 RELVMLSLPAIAGQAIDPLTLLMETAYIGRLGSVELGSAGVSMAIFNTISKLFNIPLLSV 166

Query: 147 VTS-------NIIATALAKQDEEG--------VQHHLSVLLFVGLACGCVMLLSTKLFGA 191
            TS        I A  LA +D +          +  LS      ++   V+ +   +F A
Sbjct: 167 ATSFVAEDIAKIAAQDLASEDSQSDIPSQGLPERKQLS-----SVSTALVLAIGIGIFEA 221

Query: 192 AALTVFTGP---------KNVHVVPAANTYVQIRALSWPALLVGWVAQSASLGMKDSWGP 242
            AL++ +GP          +   +P A  ++ +RAL  PA +V    Q    G KD+  P
Sbjct: 222 LALSLASGPFLRLMGIQSMSEMFIP-ARQFLVLRALGAPAYVVSLALQGIFRGFKDTKTP 280

Query: 243 LKALAAASIINGVGDILLCSCLGYGIAGAAWATMASQVVAAYMMIQALNNK------GYN 296
           +  L   + +      L       G+AGAA +++ SQ   A +M+  LN +         
Sbjct: 281 VYCLGIGNFLAVFLFPLFIYKFRMGVAGAAISSVISQYTVAILMLILLNKRVILLPPKIG 340

Query: 297 ALAFSIPTRKEFLK----ILGLAAPVYVTSISKVAFFSLLIYVSTSM----GTQTIAAHQ 348
           +L F      ++LK    +LG    V VT           + V+TSM    G   +AAHQ
Sbjct: 341 SLKFG-----DYLKSGGFVLGRTLSVLVT-----------MTVATSMAARQGVFAMAAHQ 384

Query: 349 VMIQIYMACTVWGEPLCQTAQS 370
           + +Q+++A ++  + L  + Q+
Sbjct: 385 ICMQVWLAVSLLTDALASSGQA 406


>AT3G08040.2 | Symbols: FRD3, MAN1, ATFRD3 | MATE efflux family
           protein | chr3:2566593-2569397 REVERSE LENGTH=526
          Length = 526

 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 138/358 (38%), Gaps = 41/358 (11%)

Query: 172 LFVGLACGCVMLLSTKLFGAAALTVFTGPKNVHVVPAANTYVQIRALSWPALLVGWVAQS 231
           L +GL     ++ S+KL     L V     N  ++  A+ Y+ IRAL  PALL+    Q 
Sbjct: 179 LILGLVQAIFLIFSSKLL----LGVMGVKPNSPMLSPAHKYLSIRALGAPALLLSLAMQG 234

Query: 232 ASLGMKDSWGPLKALAAASIINGVGDILLCSCLGYGIAGAAWATMASQVVAAYMMIQALN 291
              G KD+  PL A   A +IN V D +    L  GI GAA A + SQ     ++   L 
Sbjct: 235 IFRGFKDTKTPLFATVVADVINIVLDPIFIFVLRLGIIGAAIAHVISQYFMTLILFVFLA 294

Query: 292 NK------GYNALAFSIPTRKEFLK--ILGLAAPVYVTSISKVAFFSLLIYVSTSMGTQT 343
            K       +  L F       FLK  +L LA  + VT    +A       ++  +GT  
Sbjct: 295 KKVNLIPPNFGDLQFG-----RFLKNGLLLLARTIAVTFCQTLA-----AAMAARLGTTP 344

Query: 344 IAAHQVMIQIYMACTVWGEPLCQTAQSYM----PELMYGVNXXXXXXXXXXXXXXXXXXX 399
           +AA Q+ +Q+++  ++  + L    Q+ +     E  Y                      
Sbjct: 345 MAAFQICLQVWLTSSLLNDGLAVAGQAILACSFAEKDYN------KVTAVASRVLQMGFV 398

Query: 400 XXXXXXXXXXXXXXXFPYIFTPDQMVIQKMHRTLIPFFLALAVTPPTRS----LEGTLLA 455
                             +F+ D  VI  M    IPF   +A T P  S    L+G    
Sbjct: 399 LGLGLSVFVGLGLYFGAGVFSKDPAVIHLMAIG-IPF---IAATQPINSLAFVLDGVNFG 454

Query: 456 GQDLRFISLSTCGCFCLG-ALVLLIFSRYGLLGCWFTLAGFQWARFLVALLRLLSPSG 512
             D  + + S  G   +  A V+ +    G +G W  L  +   R +  + R+ + +G
Sbjct: 455 ASDFAYTAYSMVGVAAISIAAVIYMAKTNGFIGIWIALTIYMALRAITGIARMATGTG 512


>AT3G08040.1 | Symbols: FRD3, MAN1, ATFRD3 | MATE efflux family
           protein | chr3:2566593-2569397 REVERSE LENGTH=526
          Length = 526

 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 138/358 (38%), Gaps = 41/358 (11%)

Query: 172 LFVGLACGCVMLLSTKLFGAAALTVFTGPKNVHVVPAANTYVQIRALSWPALLVGWVAQS 231
           L +GL     ++ S+KL     L V     N  ++  A+ Y+ IRAL  PALL+    Q 
Sbjct: 179 LILGLVQAIFLIFSSKLL----LGVMGVKPNSPMLSPAHKYLSIRALGAPALLLSLAMQG 234

Query: 232 ASLGMKDSWGPLKALAAASIINGVGDILLCSCLGYGIAGAAWATMASQVVAAYMMIQALN 291
              G KD+  PL A   A +IN V D +    L  GI GAA A + SQ     ++   L 
Sbjct: 235 IFRGFKDTKTPLFATVVADVINIVLDPIFIFVLRLGIIGAAIAHVISQYFMTLILFVFLA 294

Query: 292 NK------GYNALAFSIPTRKEFLK--ILGLAAPVYVTSISKVAFFSLLIYVSTSMGTQT 343
            K       +  L F       FLK  +L LA  + VT    +A       ++  +GT  
Sbjct: 295 KKVNLIPPNFGDLQFG-----RFLKNGLLLLARTIAVTFCQTLA-----AAMAARLGTTP 344

Query: 344 IAAHQVMIQIYMACTVWGEPLCQTAQSYM----PELMYGVNXXXXXXXXXXXXXXXXXXX 399
           +AA Q+ +Q+++  ++  + L    Q+ +     E  Y                      
Sbjct: 345 MAAFQICLQVWLTSSLLNDGLAVAGQAILACSFAEKDYN------KVTAVASRVLQMGFV 398

Query: 400 XXXXXXXXXXXXXXXFPYIFTPDQMVIQKMHRTLIPFFLALAVTPPTRS----LEGTLLA 455
                             +F+ D  VI  M    IPF   +A T P  S    L+G    
Sbjct: 399 LGLGLSVFVGLGLYFGAGVFSKDPAVIHLMAIG-IPF---IAATQPINSLAFVLDGVNFG 454

Query: 456 GQDLRFISLSTCGCFCLG-ALVLLIFSRYGLLGCWFTLAGFQWARFLVALLRLLSPSG 512
             D  + + S  G   +  A V+ +    G +G W  L  +   R +  + R+ + +G
Sbjct: 455 ASDFAYTAYSMVGVAAISIAAVIYMAKTNGFIGIWIALTIYMALRAITGIARMATGTG 512