Miyakogusa Predicted Gene

Lj6g3v1898070.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1898070.1 tr|A8JHA2|A8JHA2_CHLRE Predicted protein
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_154375 PE=4
SV=1,37.18,7e-16,Glyco_hydro_81,Glycoside hydrolase, family 81; FAMILY
NOT NAMED,NULL,gene.g66887.t1.1
         (248 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G15870.1 | Symbols:  | glycosyl hydrolase family 81 protein |...   358   2e-99
AT1G18310.1 | Symbols:  | glycosyl hydrolase family 81 protein |...   314   4e-86

>AT5G15870.1 | Symbols:  | glycosyl hydrolase family 81 protein |
           chr5:5182641-5184878 REVERSE LENGTH=745
          Length = 745

 Score =  358 bits (918), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 165/229 (72%), Positives = 194/229 (84%), Gaps = 7/229 (3%)

Query: 19  LPKKGSTDTGADFGFGLYNDHHYHLGYFVYGIAVLARIDPVWGRKYKPQAYSLMEDFMTL 78
           + K GS D+GADFGFG+YNDHHYHLGYFVY IAVLA+IDP+WG++Y+PQAY+LM D++TL
Sbjct: 444 ITKLGSRDSGADFGFGIYNDHHYHLGYFVYAIAVLAKIDPLWGKRYRPQAYTLMADYLTL 503

Query: 79  SRN---SNSNYTRLRCFDLYKLHSWAGGLTEFADGRNQESTSEAVNAYYSAALMGLAYGD 135
            +    SNSNY RLRCFDL+KLHSWAGGLTEFADGRNQESTSEAVNAYYSAAL+GLAYGD
Sbjct: 504 GKKGAKSNSNYPRLRCFDLFKLHSWAGGLTEFADGRNQESTSEAVNAYYSAALLGLAYGD 563

Query: 136 THLVEIGSTLAALEIHAAQMWWHVREEDKLYEADFTKGNKVVGVLWANKRDSGLWFAPPD 195
           THLV   S +  LEIHAA+MWW V+E+D +Y  DFT  N+VVGVLW+ KRDSGLWFAP +
Sbjct: 564 THLVAAASMVLTLEIHAAKMWWQVKEDDAIYPQDFTSENRVVGVLWSTKRDSGLWFAPKE 623

Query: 196 WRECRLGIQVLPILPISEALFSNVGFVKELVKWTLPALHT----EKWKG 240
           W+ECRLGIQ+LP+LP+SE LFS+V FVK+LV WT+PAL      E WKG
Sbjct: 624 WKECRLGIQLLPLLPVSEVLFSDVTFVKQLVNWTMPALARDSVGEGWKG 672


>AT1G18310.1 | Symbols:  | glycosyl hydrolase family 81 protein |
           chr1:6301200-6303956 REVERSE LENGTH=649
          Length = 649

 Score =  314 bits (804), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 153/238 (64%), Positives = 178/238 (74%), Gaps = 22/238 (9%)

Query: 19  LPKKGSTDTGADFGFGLYNDHHYHLGYFVYGIAVLARIDPVWGRKYKPQAYSLMEDFMTL 78
           + K+GS D+ ADFGFG+YNDHHYH+GYF+Y IAVLA+ DP+WG +Y+ QAYSL+ DFMT 
Sbjct: 393 ITKQGSKDSQADFGFGIYNDHHYHIGYFLYAIAVLAKFDPLWGERYRAQAYSLLADFMTF 452

Query: 79  SR----NSNSNYTRLRCFDLYKLHSWAGGLTEFADGRNQESTSEAVNAYYSAALMGLAYG 134
            R    NSNS+Y RLR FDL+KLHSWAGGLTEF DGRNQESTSEAVNAYYSAAL+GLAYG
Sbjct: 453 GRKDDNNSNSSYPRLRNFDLFKLHSWAGGLTEFWDGRNQESTSEAVNAYYSAALLGLAYG 512

Query: 135 DTHLVEIGSTLAALEIHAAQMWWHVREEDKLYEADFTKGNKVVGVLWANKRDSGLWFAPP 194
           D HLVE  ST+  LEIHAA+MWW V++ + LY  DFT  N+VVGVLW+ KRDS LWF P 
Sbjct: 513 DKHLVETASTIMTLEIHAAKMWWQVKKGEALYPKDFTAENRVVGVLWSTKRDSSLWFGPK 572

Query: 195 DWRECRLGIQVLPILPISEALFSNVGFVKELVKWTLPALHT----EKWKGCLCTARTL 248
           +W+ECRLGIQ+LPILP              LV WTLPAL      E WKG L    +L
Sbjct: 573 EWKECRLGIQLLPILP--------------LVNWTLPALQRNGVGEGWKGFLYALESL 616