Miyakogusa Predicted Gene

Lj6g3v1882470.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1882470.1 Non Chatacterized Hit- tr|I1M144|I1M144_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.36097
PE,63.43,0,SUBFAMILY NOT NAMED,NULL; MAHOGUNIN,NULL; RING/U-box,NULL;
Ring finger,Zinc finger, RING-type; ZF_RI,CUFF.60157.1
         (386 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G06140.1 | Symbols:  | RING/U-box superfamily protein | chr3:...   305   3e-83
AT5G19080.1 | Symbols:  | RING/U-box superfamily protein | chr5:...   293   2e-79
AT3G09770.1 | Symbols:  | RING/U-box superfamily protein | chr3:...   238   7e-63
AT3G53410.1 | Symbols:  | RING/U-box superfamily protein | chr3:...   221   8e-58
AT5G03200.1 | Symbols:  | RING/U-box superfamily protein | chr5:...   211   5e-55
AT3G09770.2 | Symbols:  | RING/U-box superfamily protein | chr3:...   187   8e-48
AT1G59560.1 | Symbols: ZCF61, DAL2 | E3 Ubiquitin ligase family ...    51   1e-06

>AT3G06140.1 | Symbols:  | RING/U-box superfamily protein |
           chr3:1856993-1858777 REVERSE LENGTH=359
          Length = 359

 Score =  305 bits (782), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 152/254 (59%), Positives = 186/254 (73%), Gaps = 8/254 (3%)

Query: 134 YVNHQTTKKIRSHVNVHKGTLRFELDDLKPHHYLVSFVFDAVYDGSITIIYFANEEERCR 193
           Y+  Q  KK+R+ VNVH+ T+R E+DDL P H+LVSFVFDA++DGS TI +FA EE  C 
Sbjct: 112 YLEQQNAKKVRNDVNVHRDTVRLEVDDLVPGHHLVSFVFDALFDGSFTITFFAKEEPNCT 171

Query: 194 FVPLFPDIFEPVRVPFQKGVGQKFVQPSGTGTDLSIFELDALTKSSPEEDAFPLIICAET 253
            +P FP+++ P R  FQKG GQKF+QPSGTGTDLS F LD L+K   EED +PL+I AET
Sbjct: 172 IIPQFPEVYSPTRFHFQKGPGQKFLQPSGTGTDLSFFVLDDLSKPL-EEDVYPLVISAET 230

Query: 254 CAIDETPGHSMPGAHPPPHMQITQCVLQRSNGGGAFQIKVVRQILWIDGVRYELRELYGI 313
                +            H Q+TQ VL++ N  G+F++KVV+QILWI+GVRYELRELYG 
Sbjct: 231 IISPNSISE-----QSSVHKQVTQAVLEKDN-DGSFKVKVVKQILWIEGVRYELRELYGS 284

Query: 314 GSSG-ATDFDNSEPGKDCVICMIEPKDTAVLPCRHMCMCSECAKTLRLQSNKCPICRQSI 372
            + G A+  D S  G +CVICM E KDTAVLPCRH+CMCS+CAK LRLQSNKCPICRQ I
Sbjct: 285 TTQGAASGLDESGSGTECVICMTEAKDTAVLPCRHLCMCSDCAKELRLQSNKCPICRQPI 344

Query: 373 EELIEIKMNNSYHQ 386
           EEL+EIKMN+S  Q
Sbjct: 345 EELLEIKMNSSDEQ 358


>AT5G19080.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:6378400-6380287 FORWARD LENGTH=378
          Length = 378

 Score =  293 bits (749), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 144/258 (55%), Positives = 187/258 (72%), Gaps = 13/258 (5%)

Query: 134 YVNHQTTKKIRSHVNVHKGTLRFELDDLKPHHYLVSFVFDAVYDGSITIIYFANEEERCR 193
           YV HQT KK+++ VNV+K T+R   DDL P HYLVSFVFDA++DGS TII+F  EE +C 
Sbjct: 128 YVEHQTAKKVKNDVNVNKATVRLVADDLNPGHYLVSFVFDALFDGSFTIIFFGEEESKCT 187

Query: 194 FVPLFPDIFEPVRVPFQKGVGQKFVQPSGTGTDLSIFELDALTKSSPEEDAFPLIICAET 253
            VP  P+ F P++VPFQKG GQKF+Q  GTG DL  F LD L+K SPEE  +PL+I AET
Sbjct: 188 IVPHLPEAFPPIKVPFQKGAGQKFLQAPGTGIDLGFFSLDDLSKPSPEE-VYPLVISAET 246

Query: 254 CAIDETPGHSMPGAHPPPHMQITQCVLQRSNGGGAFQIKVVRQILWIDGVRYELRELYGI 313
                    S     P  H QITQ VL+++N  G+F++KV++QILWI+G RYEL+ELYGI
Sbjct: 247 VI-----SPSSVSEEPLVHKQITQAVLEKTN-DGSFKVKVMKQILWIEGERYELQELYGI 300

Query: 314 GSS-----GATDFDNSEPGKDCVICMIEPKDTAVLPCRHMCMCSECAKTLRLQSNKCPIC 368
            +S      A+  +++  GK+CVIC+ EPKDTAV+PCRH+C+CS+CA+ LR Q+NKCPIC
Sbjct: 301 DNSITQGTAASGLEDTG-GKECVICLTEPKDTAVMPCRHLCLCSDCAEELRFQTNKCPIC 359

Query: 369 RQSIEELIEIKMNNSYHQ 386
           RQ I EL++IK+ +S  Q
Sbjct: 360 RQPIHELVKIKVESSDEQ 377


>AT3G09770.1 | Symbols:  | RING/U-box superfamily protein |
           chr3:2996402-2997835 REVERSE LENGTH=388
          Length = 388

 Score =  238 bits (606), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 119/252 (47%), Positives = 164/252 (65%), Gaps = 10/252 (3%)

Query: 134 YVNHQTTKKIRSHVNVHKGTLRFELDDLKPHHYLVSFVFDAVYDGSITIIYFANEEERCR 193
           YV HQ    IR+ VN+ K +LR E D   P  +LVSF FDA   G I++I+FA E E C+
Sbjct: 123 YVEHQKAVTIRNDVNLKKESLRLEPDPDNPGRFLVSFTFDATVSGRISVIFFAKESEDCK 182

Query: 194 FVPLFPDIFEPVRVPFQKGVGQKFVQPSGTGTDLSIFELDALTKSSPEEDAFPLIICAET 253
                 DI  P+ + F+KG+GQKF Q SG+G D S+FE   L K++ + + +PL + AE 
Sbjct: 183 LTATKEDILPPITLDFEKGLGQKFKQSSGSGIDFSVFEDVELFKAAADTEIYPLAVKAEA 242

Query: 254 C-AIDETPGHSMPGAHPPPHMQITQCVLQRSNGGGAFQIKVVRQILWIDGVRYELRELYG 312
             +  E       G+    + QITQ V ++    G  +I+VV+QILW++G RYEL+E+YG
Sbjct: 243 APSGGENEEEERSGSK---NAQITQAVYEKDK--GEIKIRVVKQILWVNGTRYELQEIYG 297

Query: 313 IGSS----GATDFDNSEPGKDCVICMIEPKDTAVLPCRHMCMCSECAKTLRLQSNKCPIC 368
           IG++      +  D ++PGK+CVIC+ EP+DT VLPCRHMCMCS CAK LR Q+N+CPIC
Sbjct: 298 IGNTVEGDDDSADDANDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPIC 357

Query: 369 RQSIEELIEIKM 380
           RQ +E L+EIK+
Sbjct: 358 RQPVERLLEIKV 369


>AT3G53410.1 | Symbols:  | RING/U-box superfamily protein |
           chr3:19801175-19802274 REVERSE LENGTH=299
          Length = 299

 Score =  221 bits (562), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 112/251 (44%), Positives = 159/251 (63%), Gaps = 9/251 (3%)

Query: 134 YVNHQTTKKIRSHVNVHKGTLRFELDDLKPHHYLVSFVFDAVYDGSITIIYFANEEERCR 193
           YV HQ    IR+ +N+ K TLR E D+  P  +L+SF FDA   GSIT+++FA E + C 
Sbjct: 54  YVEHQEAVTIRNDINLKKETLRLEPDEQNPGKFLLSFTFDASVPGSITVMFFAKEGKDCN 113

Query: 194 FVPLFPDIFEPVRVPFQKGVGQKFVQPSGTGTDLSIFELDALTKSSPEEDAFPLIICAET 253
            +    D+F   +V F KG+ Q+F Q  GTG D S      L +++ E D + + + AE 
Sbjct: 114 LIATKEDLFPSTQVSFAKGLEQRFKQACGTGIDFSDMSEADLVEAN-ETDVYHVAVKAEV 172

Query: 254 CAIDETPGHSMPGAHPPPHMQITQCVLQRSNGGGAFQIKVVRQILWIDGVRYELRELYGI 313
            + D+ P    P      + QIT  VL++ + G  ++ +VV+QILW++G RY L+E+YGI
Sbjct: 173 VSEDDHPESGTP------NRQITHVVLEKDHKG-EYKARVVKQILWVNGNRYVLQEIYGI 225

Query: 314 GSS-GATDFDNSEPGKDCVICMIEPKDTAVLPCRHMCMCSECAKTLRLQSNKCPICRQSI 372
           G++      D +E GK+CVIC+ EP+DT VLPCRHMCMCS CAK LR Q+N CPICRQ +
Sbjct: 226 GNTVDDNGEDANERGKECVICLSEPRDTTVLPCRHMCMCSGCAKLLRFQTNLCPICRQPV 285

Query: 373 EELIEIKMNNS 383
           + L+EI +NN+
Sbjct: 286 DRLLEITVNNN 296


>AT5G03200.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:760450-761667 REVERSE LENGTH=337
          Length = 337

 Score =  211 bits (538), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 111/245 (45%), Positives = 147/245 (60%), Gaps = 14/245 (5%)

Query: 137 HQTTKKIRSHVNVHKGTLRFELDDLKPHHYLVSFVFDAVYDGSITIIYFANEEERCRFVP 196
           HQ    IR+ VN+ K TL    D   P+  LVSF FDA   G IT+++FA E+  C    
Sbjct: 106 HQKAVTIRNDVNLKKKTLTLIPDPENPNRLLVSFTFDASMPGRITVVFFATEDAECNLRA 165

Query: 197 LFPDIFEPVRVPFQKGVGQKFVQPSGTGTDLSIFELDALTKSSPEEDAFPLIICAETCAI 256
              D   P+   F +G+GQKF+Q SGTG DL+ F+   L K   + D FPL + AE    
Sbjct: 166 TKEDTLPPITFDFGEGLGQKFIQSSGTGIDLTAFKDSELFKEV-DTDVFPLAVKAEATPA 224

Query: 257 DETPGHSMPGAHPPPHMQITQCVLQRSNGGGAFQIKVVRQILWIDGVRYELRELYGIGSS 316
           +E    S        ++QITQ V  +  G    +I+VV+QILW++  RYEL E+YGI ++
Sbjct: 225 EEGKSGST-------NVQITQVVYTKEKG--EIKIEVVKQILWVNKRRYELLEIYGIENT 275

Query: 317 GATDFDNSEPGKDCVICMIEPKDTAVLPCRHMCMCSECAKTLRLQSNKCPICRQSIEELI 376
                D S+ GK+CV+C+ EP+DT VLPCRHMCMCS CAK LR Q+N CP+CRQ +E L+
Sbjct: 276 ----VDGSDEGKECVVCLSEPRDTTVLPCRHMCMCSGCAKALRFQTNLCPVCRQPVEMLL 331

Query: 377 EIKMN 381
           EI  N
Sbjct: 332 EINKN 336


>AT3G09770.2 | Symbols:  | RING/U-box superfamily protein |
           chr3:2996629-2997835 REVERSE LENGTH=341
          Length = 341

 Score =  187 bits (476), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 97/221 (43%), Positives = 137/221 (61%), Gaps = 10/221 (4%)

Query: 134 YVNHQTTKKIRSHVNVHKGTLRFELDDLKPHHYLVSFVFDAVYDGSITIIYFANEEERCR 193
           YV HQ    IR+ VN+ K +LR E D   P  +LVSF FDA   G I++I+FA E E C+
Sbjct: 123 YVEHQKAVTIRNDVNLKKESLRLEPDPDNPGRFLVSFTFDATVSGRISVIFFAKESEDCK 182

Query: 194 FVPLFPDIFEPVRVPFQKGVGQKFVQPSGTGTDLSIFELDALTKSSPEEDAFPLIICAET 253
                 DI  P+ + F+KG+GQKF Q SG+G D S+FE   L K++ + + +PL + AE 
Sbjct: 183 LTATKEDILPPITLDFEKGLGQKFKQSSGSGIDFSVFEDVELFKAAADTEIYPLAVKAEA 242

Query: 254 C-AIDETPGHSMPGAHPPPHMQITQCVLQRSNGGGAFQIKVVRQILWIDGVRYELRELYG 312
             +  E       G+    + QITQ V ++    G  +I+VV+QILW++G RYEL+E+YG
Sbjct: 243 APSGGENEEEERSGSK---NAQITQAVYEKDK--GEIKIRVVKQILWVNGTRYELQEIYG 297

Query: 313 IGSS----GATDFDNSEPGKDCVICMIEPKDTAVLPCRHMC 349
           IG++      +  D ++PGK+CVIC+ EP+DT VLPCRHM 
Sbjct: 298 IGNTVEGDDDSADDANDPGKECVICLSEPRDTTVLPCRHMV 338


>AT1G59560.1 | Symbols: ZCF61, DAL2 | E3 Ubiquitin ligase family
           protein | chr1:21881741-21883632 FORWARD LENGTH=338
          Length = 338

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 5/64 (7%)

Query: 315 SSGATDFDNSEPGKDCVICMIEPKDTAVLPCRHMCMCSECAKTLRLQSNKCPICRQSIEE 374
           + G T  D   P   CV+C+ +  +TA + C HMC C+ C+    LQ   CP+CR+ I++
Sbjct: 277 TGGGTSRDGDTPDL-CVVCLDQKYNTAFVECGHMCCCTPCS----LQLRTCPLCRERIQQ 331

Query: 375 LIEI 378
           +++I
Sbjct: 332 VLKI 335