Miyakogusa Predicted Gene
- Lj6g3v1880110.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1880110.1 tr|D7KHY5|D7KHY5_ARALL Pentatricopeptide
repeat-containing protein OS=Arabidopsis lyrata subsp.
lyra,26.87,1e-18,PPR,Pentatricopeptide repeat; PPR_2,Pentatricopeptide
repeat; PPR: pentatricopeptide repeat domain,P,CUFF.60044.1
(453 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 540 e-154
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 323 1e-88
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 307 1e-83
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 3e-83
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 4e-81
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 296 2e-80
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 293 2e-79
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 290 1e-78
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 5e-78
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 288 7e-78
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 287 1e-77
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 2e-77
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 3e-77
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 4e-76
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 1e-75
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 278 6e-75
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 278 7e-75
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 7e-75
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 278 8e-75
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 1e-74
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 8e-74
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 2e-73
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 2e-73
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 4e-73
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 8e-73
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 8e-73
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 9e-73
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 270 2e-72
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 4e-72
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 268 5e-72
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 1e-71
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 1e-71
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 2e-71
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 2e-71
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 266 3e-71
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 3e-71
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 265 4e-71
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 7e-71
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 263 1e-70
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 263 1e-70
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 262 4e-70
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 262 5e-70
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 5e-70
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 6e-70
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 259 3e-69
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 4e-69
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 4e-69
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 5e-69
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 7e-69
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 7e-69
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 2e-68
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 2e-68
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 256 3e-68
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 3e-68
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 4e-68
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 4e-68
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 255 5e-68
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 6e-68
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 8e-68
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 1e-67
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 2e-67
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 2e-67
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 2e-67
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 253 2e-67
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 253 2e-67
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 3e-67
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 252 4e-67
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 5e-67
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 5e-67
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 1e-66
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 250 1e-66
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 1e-66
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 2e-66
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 4e-66
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 4e-66
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 5e-66
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 5e-66
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 5e-66
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 9e-66
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 2e-65
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 246 2e-65
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 5e-65
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 6e-65
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 6e-65
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 7e-64
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 1e-63
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 2e-63
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 239 2e-63
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 3e-63
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 4e-63
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 238 5e-63
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 238 7e-63
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 238 7e-63
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 8e-63
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 8e-63
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 8e-63
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 237 1e-62
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 1e-62
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 2e-62
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 2e-62
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 2e-62
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 4e-62
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 1e-61
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 4e-61
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 7e-61
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 7e-61
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 8e-61
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 1e-60
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 1e-60
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 2e-60
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 230 2e-60
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 229 3e-60
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 3e-60
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 228 6e-60
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 228 7e-60
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 228 8e-60
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 9e-60
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 1e-59
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 2e-59
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 3e-59
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 226 3e-59
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 5e-59
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 225 5e-59
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 6e-59
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 224 1e-58
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 223 2e-58
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 223 2e-58
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 4e-58
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 7e-58
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 9e-58
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 220 1e-57
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 2e-57
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 219 4e-57
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 219 4e-57
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 217 2e-56
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 216 2e-56
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 216 3e-56
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 214 7e-56
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 8e-56
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 212 5e-55
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 6e-55
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 7e-55
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 9e-55
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 1e-54
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 9e-54
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 1e-53
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 1e-53
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 3e-53
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 3e-53
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 4e-53
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 5e-53
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 2e-52
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 202 4e-52
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 8e-51
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 196 3e-50
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 4e-50
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 7e-49
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 190 2e-48
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 2e-48
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 3e-48
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 189 3e-48
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 4e-48
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 4e-48
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 185 6e-47
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 183 2e-46
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 1e-44
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 3e-42
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 7e-42
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 2e-40
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 163 2e-40
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 4e-40
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 1e-33
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 133 3e-31
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 4e-31
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 3e-28
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 112 6e-25
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 105 8e-23
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 7e-21
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 2e-20
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 97 3e-20
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 1e-19
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 94 1e-19
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 94 2e-19
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 3e-18
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 4e-18
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 4e-18
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 90 4e-18
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 4e-18
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 5e-18
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 9e-18
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 1e-17
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 88 1e-17
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 2e-17
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 84 3e-16
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 84 3e-16
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 7e-16
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 81 2e-15
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 80 3e-15
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 80 4e-15
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 78 1e-14
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 5e-14
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 6e-14
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 75 7e-14
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 75 9e-14
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 5e-13
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 6e-13
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 8e-13
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 72 8e-13
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 67 3e-11
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 65 7e-11
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 65 8e-11
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 8e-11
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 8e-11
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 6e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 62 1e-09
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 5e-09
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 59 6e-09
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 56 4e-08
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 56 6e-08
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 54 2e-07
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 51 1e-06
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 1e-06
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 51 2e-06
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 50 3e-06
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 540 bits (1391), Expect = e-154, Method: Compositional matrix adjust.
Identities = 244/425 (57%), Positives = 322/425 (75%)
Query: 28 SANNPVTLIATQLCNCTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNA 87
S + L+AT L NCT + ++ +++ I R+ L+ P F WNNI+R Y R E+P +A
Sbjct: 42 SPQDRNKLLATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDA 101
Query: 88 LRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINL 147
+++++ M+R+ VLPDRY+LPIV+KA Q LGK++HS+ V++G +E+CE+GFI L
Sbjct: 102 IQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITL 161
Query: 148 YCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTM 207
YCK+GEF +AR VFDENP+ KLGSWNA+IGGL+ G A +A+ +FV+M+R G PD TM
Sbjct: 162 YCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTM 221
Query: 208 VSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATM 267
VS+T++CG +GDL L QLH CV AK E++DI+M NSL+DMYGKCGRMDLA +F M
Sbjct: 222 VSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEM 281
Query: 268 DERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGR 327
+RNV SW+S+IVGYA +G+ EALECF MRE GVRPN +TFVGVLSACVHGG V+EG+
Sbjct: 282 RQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGK 341
Query: 328 CYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACET 387
YF MMK+ + + P L HYGC+VDLL R G L EA K+VEEMPMKPN +VWGCLMG CE
Sbjct: 342 TYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEK 401
Query: 388 YGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
+G+VEM E+VA ++ LEPWNDG YVVL+N+YA +GMWK+VER+R MK ++AK+PAYS
Sbjct: 402 FGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYS 461
Query: 448 LTTNS 452
+ +
Sbjct: 462 YASTT 466
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 323 bits (829), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 174/488 (35%), Positives = 268/488 (54%), Gaps = 55/488 (11%)
Query: 12 CYSVSQRSITQTLLLDSANNPVTLIATQL---CNCTHIHQLNQVYAHILRTHFLESNPAP 68
C ++ S + + S TL A ++ C + +H + YAH + + N
Sbjct: 33 CRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNC-- 90
Query: 69 FNWNNIIRCYTRLEAPRNALRL---HVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQV 125
F+WN IIR ++ + + + + + +M V P+R+T P VLKA ++ I+ GKQ+
Sbjct: 91 FSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQI 150
Query: 126 HSLGVKIGLQTNEYCETGFINLYC------------------------------------ 149
H L +K G +E+ + + +Y
Sbjct: 151 HGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVL 210
Query: 150 ---------KSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGF 200
+ G+ +ARM+FD+ + SWN +I G S G +DA+ VF M++
Sbjct: 211 WNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDI 270
Query: 201 APDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLA 260
P+ VT+VS+ A +G L+LG LH +Y + R D ++ ++L+DMY KCG ++ A
Sbjct: 271 RPNYVTLVSVLPAISRLGSLELGEWLH--LYAEDSGIRIDDVLGSALIDMYSKCGIIEKA 328
Query: 261 YKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHG 320
VF + NV +W+++I G+A+HG +A++CF MR+AGVRP+ V ++ +L+AC HG
Sbjct: 329 IHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHG 388
Query: 321 GKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGC 380
G V+EGR YF M +V G+ PR++HYGCMVDLLGR+GLLDEA + + MP+KP+ ++W
Sbjct: 389 GLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKA 448
Query: 381 LMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRL 440
L+GAC GNVEMG+ VA L + P + GAYV LSN+YA++G W EV +R MKE +
Sbjct: 449 LLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDI 508
Query: 441 AKVPAYSL 448
K P SL
Sbjct: 509 RKDPGCSL 516
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 307 bits (786), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 157/414 (37%), Positives = 236/414 (57%), Gaps = 36/414 (8%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WN++I C+ + AL + +ML + V PD TL V+ A AI++G++VH
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 130 VK-IGLQTNEYCETGFINLYCKSGEFTSARMVFDENP----------------------- 165
VK L+ + F+++Y K AR +FD P
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAA 339
Query: 166 --------DPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSV 217
+ + SWNA+I G +Q G +A+ +F ++R P + ++ AC +
Sbjct: 340 RLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADL 399
Query: 218 GDLQLGLQLHTCV----YHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVS 273
+L LG+Q H V + ++ E DI + NSL+DMY KCG ++ Y VF M ER+
Sbjct: 400 AELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCV 459
Query: 274 SWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMM 333
SW ++I+G+A +G+ NEALE F M E+G +P+++T +GVLSAC H G V+EGR YF M
Sbjct: 460 SWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSM 519
Query: 334 KNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEM 393
+G+ P HY CMVDLLGRAG L+EA M+EEMPM+P+S++WG L+ AC+ + N+ +
Sbjct: 520 TRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITL 579
Query: 394 GEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
G+YVA+ L +EP N G YV+LSN+YA G W++V +R SM++ + K P S
Sbjct: 580 GKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCS 633
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 195/473 (41%), Gaps = 84/473 (17%)
Query: 45 HIHQLNQVYAHILRTHFLESNPAPF---------NWNNIIRCYTRLEAPRNALRLHVLML 95
+I+ N V + + FL+ + F WN+++ + + + AL +M
Sbjct: 85 NIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMH 144
Query: 96 RAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFT 155
+ G + + Y+ VL A + G QVHSL K ++ Y + +++Y K G
Sbjct: 145 KEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVN 204
Query: 156 SARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACG 215
A+ VFDE D + SWN++I Q G A +A+ VF M PD VT+ S+ SAC
Sbjct: 205 DAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACA 264
Query: 216 SVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMD------- 268
S+ +++G ++H V R DI++ N+ VDMY KC R+ A +F +M
Sbjct: 265 SLSAIKVGQEVHGRVVKNDKL-RNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAE 323
Query: 269 ------------------------ERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVR 304
ERNV SW +LI GY +G EAL F ++ V
Sbjct: 324 TSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVC 383
Query: 305 PNYVTFVGVLSACV-----------------HGGKVQEGR--------CYFDM------M 333
P + +F +L AC HG K Q G DM +
Sbjct: 384 PTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCV 443
Query: 334 KNVYGITPRLQHYGC-----MVDLLGRAGLLDEAMKMVEEM---PMKPNSIVWGCLMGAC 385
+ Y + ++ C M+ + G +EA+++ EM KP+ I ++ AC
Sbjct: 444 EEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSAC 503
Query: 386 ETYGNVEMGEYVAKHLQ---ALEPWNDGAYVVLSNIYANKGMWKEVERIRSSM 435
G VE G + + + P D Y + ++ G +E + + M
Sbjct: 504 GHAGFVEEGRHYFSSMTRDFGVAPLRD-HYTCMVDLLGRAGFLEEAKSMIEEM 555
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 137/297 (46%), Gaps = 37/297 (12%)
Query: 123 KQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPD-------------PKL 169
+ VH+ +K G + + I+ Y K G R VFD+ P KL
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 170 G------------------SWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLT 211
G +WN+++ G +Q +A+ F M + GF + + S+
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 212 SACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERN 271
SAC + D+ G+Q+H+ + AK+ +D+ + ++LVDMY KCG ++ A +VF M +RN
Sbjct: 160 SACSGLNDMNKGVQVHSLI--AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRN 217
Query: 272 VSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFD 331
V SW SLI + +G EAL+ F M E+ V P+ VT V+SAC ++ G+
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 332 MMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMK----PNSIVWGCLMGA 384
+ + + VD+ + + EA + + MP++ S++ G M A
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAA 334
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 110/243 (45%), Gaps = 12/243 (4%)
Query: 54 AHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAV 113
A ++ T E N +WN +I YT+ AL L L+ R V P Y+ +LKA
Sbjct: 339 ARLMFTKMAERNVV--SWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKAC 396
Query: 114 CQSFAIELGKQVHSLGVKIGL--QTNE----YCETGFINLYCKSGEFTSARMVFDENPDP 167
+ LG Q H +K G Q+ E + I++Y K G +VF + +
Sbjct: 397 ADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER 456
Query: 168 KLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLH 227
SWNA+I G +Q G +A+ +F M G PD +TM+ + SACG G ++ G
Sbjct: 457 DCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYF 516
Query: 228 TCVYHA-KAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSS-WTSLIVGYAMH 285
+ + A D + +VD+ G+ G ++ A + M + S W SL+ +H
Sbjct: 517 SSMTRDFGVAPLRD--HYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
Query: 286 GHV 288
++
Sbjct: 575 RNI 577
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 305 bits (782), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 156/399 (39%), Positives = 240/399 (60%), Gaps = 5/399 (1%)
Query: 53 YAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVL-PDRYTLPIVLK 111
YAH + + +E F WN +IR Y + +A L+ M +G++ PD +T P ++K
Sbjct: 71 YAHKVFSK-IEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIK 129
Query: 112 AVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGS 171
AV + LG+ +HS+ ++ G + Y + ++LY G+ SA VFD+ P+ L +
Sbjct: 130 AVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVA 189
Query: 172 WNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVY 231
WN+VI G ++ G +A+ ++ M G PDG T+VSL SAC +G L LG ++H VY
Sbjct: 190 WNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVH--VY 247
Query: 232 HAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEA 291
K ++ N L+D+Y +CGR++ A +F M ++N SWTSLIVG A++G EA
Sbjct: 248 MIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEA 307
Query: 292 LECFWCMREA-GVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMV 350
+E F M G+ P +TFVG+L AC H G V+EG YF M+ Y I PR++H+GCMV
Sbjct: 308 IELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMV 367
Query: 351 DLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDG 410
DLL RAG + +A + ++ MPM+PN ++W L+GAC +G+ ++ E+ + LEP + G
Sbjct: 368 DLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSG 427
Query: 411 AYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYSLT 449
YV+LSN+YA++ W +V++IR M + KVP +SL
Sbjct: 428 DYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLV 466
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 298 bits (764), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 156/426 (36%), Positives = 238/426 (55%), Gaps = 35/426 (8%)
Query: 53 YAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKA 112
YA I+ F P F WN +IR ++ + P +L L+ ML + + YT P +LKA
Sbjct: 67 YAQIVFDGF--DRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKA 124
Query: 113 VCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSW 172
A E Q+H+ K+G + + Y IN Y +G F A ++FD P+P SW
Sbjct: 125 CSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSW 184
Query: 173 NAVIGGLSQGG-------------------------------LARDAIRVFVNMRRHGFA 201
N+VI G + G + ++A+++F M+
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 202 PDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAY 261
PD V++ + SAC +G L+ G +H+ Y K R D ++ L+DMY KCG M+ A
Sbjct: 245 PDNVSLANALSACAQLGALEQGKWIHS--YLNKTRIRMDSVLGCVLIDMYAKCGEMEEAL 302
Query: 262 KVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGG 321
+VF + +++V +WT+LI GYA HGH EA+ F M++ G++PN +TF VL+AC + G
Sbjct: 303 EVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTG 362
Query: 322 KVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCL 381
V+EG+ F M+ Y + P ++HYGC+VDLLGRAGLLDEA + ++EMP+KPN+++WG L
Sbjct: 363 LVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGAL 422
Query: 382 MGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLA 441
+ AC + N+E+GE + + L A++P++ G YV +NI+A W + R MKE +A
Sbjct: 423 LKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVA 482
Query: 442 KVPAYS 447
KVP S
Sbjct: 483 KVPGCS 488
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 150/379 (39%), Positives = 230/379 (60%), Gaps = 7/379 (1%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
+W +I Y++ + + AL L VLMLR V P+ YT VL++ C + + +H
Sbjct: 128 ISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS-CNGMSDV--RMLHCG 184
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
+K GL+++ + + I+++ K GE A VFDE WN++IGG +Q + A
Sbjct: 185 IIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVA 244
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
+ +F M+R GF + T+ S+ AC + L+LG+Q H + D+++ N+LV
Sbjct: 245 LELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD----QDLILNNALV 300
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYV 308
DMY KCG ++ A +VF M ER+V +W+++I G A +G+ EAL+ F M+ +G +PNY+
Sbjct: 301 DMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYI 360
Query: 309 TFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEE 368
T VGVL AC H G +++G YF MK +YGI P +HYGCM+DLLG+AG LD+A+K++ E
Sbjct: 361 TIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNE 420
Query: 369 MPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEV 428
M +P+++ W L+GAC N+ + EY AK + AL+P + G Y +LSNIYAN W V
Sbjct: 421 MECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSV 480
Query: 429 ERIRSSMKEGRLAKVPAYS 447
E IR+ M++ + K P S
Sbjct: 481 EEIRTRMRDRGIKKEPGCS 499
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 150/364 (41%), Gaps = 48/364 (13%)
Query: 77 CYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQT 136
CY R + PR A++ + G+ D T ++K + A+ G + G +
Sbjct: 37 CYQR-DLPR-AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRP 94
Query: 137 NEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMR 196
+ IN+Y K A +FD+ P + SW +I S+ + + A+ + V M
Sbjct: 95 MMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLML 154
Query: 197 RHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGR 256
R P+ T S+ +C + D+++ LH + K +D+ + ++L+D++ K G
Sbjct: 155 RDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGI--IKEGLESDVFVRSALIDVFAKLGE 209
Query: 257 MDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSA 316
+ A VF M + W S+I G+A + + ALE F M+ AG T VL A
Sbjct: 210 PEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRA 269
Query: 317 C-------------VH--------------------GGKVQEGRCYFDMMKNVYGITPRL 343
C VH G +++ F+ MK IT
Sbjct: 270 CTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVIT--- 326
Query: 344 QHYGCMVDLLGRAGLLDEAMKMVEEMP---MKPNSIVWGCLMGACETYGNVEMGEYVAKH 400
+ M+ L + G EA+K+ E M KPN I ++ AC G +E G Y +
Sbjct: 327 --WSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRS 384
Query: 401 LQAL 404
++ L
Sbjct: 385 MKKL 388
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 293 bits (749), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 152/462 (32%), Positives = 257/462 (55%), Gaps = 38/462 (8%)
Query: 18 RSITQTLLLDSAN--NPVTLIATQLCNCTHIHQLNQVYAHILRTHFLE------------ 63
+ T+ +D+ N NP+ LI+ C + +L Q+ A+ +++H +
Sbjct: 16 ETFTKHSKIDTVNTQNPILLIS----KCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCT 71
Query: 64 ------------------SNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYT 105
S P +N++ R Y+R P L V +L G+LPD YT
Sbjct: 72 ESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYT 131
Query: 106 LPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENP 165
P +LKA + A+E G+Q+H L +K+GL N Y IN+Y + + SAR VFD
Sbjct: 132 FPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIV 191
Query: 166 DPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQ 225
+P + +NA+I G ++ +A+ +F M+ P+ +T++S+ S+C +G L LG
Sbjct: 192 EPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKW 251
Query: 226 LHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMH 285
+H Y K + + + +L+DM+ KCG +D A +F M ++ +W+++IV YA H
Sbjct: 252 IHK--YAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANH 309
Query: 286 GHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQH 345
G +++ F MR V+P+ +TF+G+L+AC H G+V+EGR YF M + +GI P ++H
Sbjct: 310 GKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKH 369
Query: 346 YGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALE 405
YG MVDLL RAG L++A + ++++P+ P ++W L+ AC ++ N+++ E V++ + L+
Sbjct: 370 YGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELD 429
Query: 406 PWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
+ G YV+LSN+YA W+ V+ +R MK+ + KVP S
Sbjct: 430 DSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCS 471
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 290 bits (743), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 174/450 (38%), Positives = 242/450 (53%), Gaps = 45/450 (10%)
Query: 42 NCTHIHQLNQVYAHILRTHFLES-------------------------------NPAPFN 70
C+ + QL Q++A LRT + E N + F
Sbjct: 57 TCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFM 116
Query: 71 WNNIIR-CYTRLEAPRNALRLHVLMLRAG-VLPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
WN +IR C + A L+ ML G PD++T P VLKA F GKQVH
Sbjct: 117 WNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQ 176
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
VK G + Y G I+LY G AR VFDE P+ L SWN++I L + G A
Sbjct: 177 IVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSA 236
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAE-RTDILMWNSL 247
+++F M+R F PDG TM S+ SAC +G L LG H + + D+L+ NSL
Sbjct: 237 LQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSL 295
Query: 248 VDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCM--REAGVRP 305
++MY KCG + +A +VF M +R+++SW ++I+G+A HG EA+ F M + VRP
Sbjct: 296 IEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRP 355
Query: 306 NYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKM 365
N VTFVG+L AC H G V +GR YFDMM Y I P L+HYGC+VDL+ RAG + EA+ M
Sbjct: 356 NSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDM 415
Query: 366 VEEMPMKPNSIVWGCLMGACETYG-NVEMGEYVAKHLQALEPWND-------GAYVVLSN 417
V MPMKP++++W L+ AC G +VE+ E +A+++ + N+ GAYV+LS
Sbjct: 416 VMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSR 475
Query: 418 IYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
+YA+ W +V +R M E + K P S
Sbjct: 476 VYASASRWNDVGIVRKLMSEHGIRKEPGCS 505
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 100/223 (44%), Gaps = 14/223 (6%)
Query: 207 MVSLTSACGSVGDLQLGLQLHTCVYHAKAAER-TDILMWNSLVDMYGKCGRMDLAYKVFA 265
+ SL C + L+ QLH E + ++ ++ + ++ A++VF
Sbjct: 51 IFSLAETCSDMSQLK---QLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFD 107
Query: 266 TMDERNVSSWTSLIVGYAMH-GHVNEALECFWCMREAG-VRPNYVTFVGVLSACVHGGKV 323
+++ + W +LI A EA + M E G P+ TF VL AC +
Sbjct: 108 SIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGF 167
Query: 324 QEGR-CYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLM 382
EG+ + ++K+ +G + + ++ L G G LD A K+ +EMP + + + W ++
Sbjct: 168 SEGKQVHCQIVKHGFGGDVYVNN--GLIHLYGSCGCLDLARKVFDEMPER-SLVSWNSMI 224
Query: 383 GACETYGNVEMGEYVAKHLQ-ALEPWNDGAYVVLSNIYANKGM 424
A +G + + + +Q + EP DG Y + S + A G+
Sbjct: 225 DALVRFGEYDSALQLFREMQRSFEP--DG-YTMQSVLSACAGL 264
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 288 bits (737), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 164/432 (37%), Positives = 237/432 (54%), Gaps = 36/432 (8%)
Query: 48 QLNQVYAHILRTHFLESN----------------------------PAPFNWNNIIRCYT 79
QL +++A +LRT F E N P F WN + + Y
Sbjct: 26 QLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYV 85
Query: 80 RLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEY 139
R + P +L L+ M GV PD +T P V+KA+ Q G +H+ VK G
Sbjct: 86 RNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGI 145
Query: 140 CETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHG 199
T + +Y K GE +SA +F+ L +WNA + Q G + A+ F M
Sbjct: 146 VATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADA 205
Query: 200 FAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTD--ILMWNSLVDMYGKCGRM 257
D T+VS+ SACG +G L++G + +Y E D I++ N+ +DM+ KCG
Sbjct: 206 VQFDSFTVVSMLSACGQLGSLEIGEE----IYDRARKEEIDCNIIVENARLDMHLKCGNT 261
Query: 258 DLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSAC 317
+ A +F M +RNV SW+++IVGYAM+G EAL F M+ G+RPNYVTF+GVLSAC
Sbjct: 262 EAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSAC 321
Query: 318 VHGGKVQEGRCYFDMM--KNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNS 375
H G V EG+ YF +M N + PR +HY CMVDLLGR+GLL+EA + +++MP++P++
Sbjct: 322 SHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDT 381
Query: 376 IVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSM 435
+WG L+GAC + ++ +G+ VA L P +V+LSNIYA G W V+++RS M
Sbjct: 382 GIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKM 441
Query: 436 KEGRLAKVPAYS 447
++ KV AYS
Sbjct: 442 RKLGTKKVAAYS 453
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 288 bits (736), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 158/478 (33%), Positives = 261/478 (54%), Gaps = 39/478 (8%)
Query: 4 FFFQLGRRCYSVSQ-RSITQTLLLDSANNPVTLIATQLCNCTHIHQLNQVYAHILRTHFL 62
+F +R S ++ + I ++++ + ++ + C I ++ YA L
Sbjct: 12 YFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMD--YATRLFNQV- 68
Query: 63 ESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGV-LPDRYTLPIVLKAVCQSFAIEL 121
SNP F +N+IIR YT + +R++ +LR LPDR+T P + K+ + L
Sbjct: 69 -SNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYL 127
Query: 122 GKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQ 181
GKQVH K G + + E I++Y K + A VFDE + + SWN+++ G ++
Sbjct: 128 GKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYAR 187
Query: 182 GGLAR-------------------------------DAIRVFVNMRRHGFAPDGVTMVSL 210
G + +A+ F M+ G PD ++++S+
Sbjct: 188 LGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISV 247
Query: 211 TSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDER 270
+C +G L+LG +H ++T + N+L++MY KCG + A ++F M+ +
Sbjct: 248 LPSCAQLGSLELGKWIHLYAERRGFLKQTGVC--NALIEMYSKCGVISQAIQLFGQMEGK 305
Query: 271 NVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYF 330
+V SW+++I GYA HG+ + A+E F M+ A V+PN +TF+G+LSAC H G QEG YF
Sbjct: 306 DVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYF 365
Query: 331 DMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGN 390
DMM+ Y I P+++HYGC++D+L RAG L+ A+++ + MPMKP+S +WG L+ +C T GN
Sbjct: 366 DMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGN 425
Query: 391 VEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYSL 448
+++ HL LEP + G YV+L+NIYA+ G W++V R+R ++ + K P SL
Sbjct: 426 LDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSL 483
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 149/378 (39%), Positives = 228/378 (60%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WN +I Y + AL L M++ V PD T+ V+ A QS +IELG+QVH
Sbjct: 233 SWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWI 292
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
G +N I+LY K GE +A +F+ P + SWN +IGG + L ++A+
Sbjct: 293 DDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEAL 352
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
+F M R G P+ VTM+S+ AC +G + +G +H + + SL+D
Sbjct: 353 LLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLID 412
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
MY KCG ++ A++VF ++ +++SSW ++I G+AMHG + + + F MR+ G++P+ +T
Sbjct: 413 MYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDIT 472
Query: 310 FVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
FVG+LSAC H G + GR F M Y +TP+L+HYGCM+DLLG +GL EA +M+ M
Sbjct: 473 FVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMM 532
Query: 370 PMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVE 429
M+P+ ++W L+ AC+ +GNVE+GE A++L +EP N G+YV+LSNIYA+ G W EV
Sbjct: 533 EMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVA 592
Query: 430 RIRSSMKEGRLAKVPAYS 447
+ R+ + + + KVP S
Sbjct: 593 KTRALLNDKGMKKVPGCS 610
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 173/355 (48%), Gaps = 42/355 (11%)
Query: 66 PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQV 125
P WN + R + P +AL+L+V M+ G+LP+ YT P VLK+ +S A + G+Q+
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPD------------------- 166
H +K+G + Y T I++Y ++G A VFD++P
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216
Query: 167 ------------PKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSAC 214
+ SWNA+I G ++ G ++A+ +F +M + PD TMV++ SAC
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276
Query: 215 GSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSS 274
G ++LG Q+H + I+ N+L+D+Y KCG ++ A +F + ++V S
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLKIV--NALIDLYSKCGELETACGLFERLPYKDVIS 334
Query: 275 WTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGR---CYFD 331
W +LI GY EAL F M +G PN VT + +L AC H G + GR Y D
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID 394
Query: 332 MMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKP----NSIVWGCLM 382
K + G+T ++D+ + G ++ A ++ + K N++++G M
Sbjct: 395 --KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAM 447
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 127/294 (43%), Gaps = 38/294 (12%)
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTS---ARMVFDENPDPKLGSWNAVIGGLSQ 181
+H+ +KIGL Y + I S F A VF +P L WN + G +
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111
Query: 182 GGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI 241
A++++V M G P+ T + +C + G Q+H V K D+
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL--KLGCDLDL 169
Query: 242 LMWNSLVDMYGKCGRMDLAYKVF----------------------------ATMDE---R 270
+ SL+ MY + GR++ A+KVF DE +
Sbjct: 170 YVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK 229
Query: 271 NVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYF 330
+V SW ++I GYA G+ EALE F M + VRP+ T V V+SAC G ++ GR
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGR-QV 288
Query: 331 DMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGA 384
+ + +G L+ ++DL + G L+ A + E +P K + I W L+G
Sbjct: 289 HLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK-DVISWNTLIGG 341
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 28/189 (14%)
Query: 260 AYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVH 319
A VF T+ E N+ W ++ G+A+ AL+ + CM G+ PN TF VL +C
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 320 GGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGL---------LDEAMKMVEEMP 370
+EG + ++G +L GC +DL L L++A K+ ++ P
Sbjct: 147 SKAFKEG-------QQIHGHVLKL---GCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSP 196
Query: 371 MKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALE--PWNDGAYVVLSNIYANKGMWKE- 427
+ + + + L+ + G +E + + + + WN + + YA G +KE
Sbjct: 197 HR-DVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWN-----AMISGYAETGNYKEA 250
Query: 428 VERIRSSMK 436
+E + MK
Sbjct: 251 LELFKDMMK 259
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 286 bits (731), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/447 (35%), Positives = 231/447 (51%), Gaps = 66/447 (14%)
Query: 72 NNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVK 131
N+++R + P + L+ M + GV PDRYT VLKA + G H V+
Sbjct: 81 NHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVR 140
Query: 132 IGLQTNEYCETGFINL-------------------------------YCKSGEFTSARMV 160
G NEY + I Y K G+ A +
Sbjct: 141 HGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRL 200
Query: 161 FDENP-------------------------------DPKLGSWNAVIGGLSQGGLARDAI 189
FDE P + + +WNA+I G G ++A+
Sbjct: 201 FDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEAL 260
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDIL---MWNS 246
+F MR G PD VT++SL SAC +GDL+ G +LH + + + + +WN+
Sbjct: 261 GIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNA 320
Query: 247 LVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPN 306
L+DMY KCG +D A +VF + +R++S+W +LIVG A+H H ++E F M+ V PN
Sbjct: 321 LIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPN 379
Query: 307 YVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMV 366
VTF+GV+ AC H G+V EGR YF +M+++Y I P ++HYGCMVD+LGRAG L+EA V
Sbjct: 380 EVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFV 439
Query: 367 EEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWK 426
E M ++PN+IVW L+GAC+ YGNVE+G+Y + L ++ G YV+LSNIYA+ G W
Sbjct: 440 ESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWD 499
Query: 427 EVERIRSSMKEGRLAKVPAYSLTTNSD 453
V+++R + R+ K SL D
Sbjct: 500 GVQKVRKMFDDTRVKKPTGVSLIEEDD 526
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 147/360 (40%), Gaps = 86/360 (23%)
Query: 123 KQVHSLGVKIGLQTNEYCETGFINLYCKS----GEFTSARMVFDENPDPKLGSWNAVIGG 178
KQ+H+ V GL +N I Y S G A +FDE P P + N V+ G
Sbjct: 29 KQIHASMVVNGLMSNLSVVGELI--YSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRG 86
Query: 179 LSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCV-------- 230
+Q + ++ M + G +PD T + AC + G H V
Sbjct: 87 SAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLN 146
Query: 231 ---------YHAK------AAERTD------ILMWNSLVDMYGKCGRMDLAYKVFATM-- 267
+HA A+E D + W+S+ Y K G++D A ++F M
Sbjct: 147 EYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPY 206
Query: 268 -----------------------------DERNVSSWTSLIVGYAMHGHVNEALECFWCM 298
E++V +W ++I GY G+ EAL F M
Sbjct: 207 KDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEM 266
Query: 299 REAGVRPNYVTFVGVLSACVHGGKVQEG-RCYFDMMK------NVYGITPRLQHYGCMVD 351
R+AG P+ VT + +LSAC G ++ G R + +++ ++Y TP + ++D
Sbjct: 267 RDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTP---IWNALID 323
Query: 352 LLGRAGLLDEAMKMVEEMPMKP----NSIVWGCLMGACETYGNVEMGEYVAKHLQALEPW 407
+ + G +D A+++ + + N+++ G + E G++EM E +Q L+ W
Sbjct: 324 MYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHAE--GSIEMFE----EMQRLKVW 377
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 286 bits (731), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 156/402 (38%), Positives = 225/402 (55%), Gaps = 12/402 (2%)
Query: 53 YAHILRTHFLESNPAP--FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVL 110
Y H+L FL S P P F +N++I+ ++L P + + + ML + V P YT V+
Sbjct: 59 YTHLL---FL-SVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVI 114
Query: 111 KAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLG 170
K+ A+ +GK VH V G + Y + + Y K G+ AR VFD P+ +
Sbjct: 115 KSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIV 174
Query: 171 SWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCV 230
+WN+++ G Q GLA +AI+VF MR GF PD T VSL SAC G + LG +H
Sbjct: 175 AWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQ-- 232
Query: 231 YHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNE 290
Y ++ + +L+++Y +CG + A +VF M E NV++WT++I Y HG+ +
Sbjct: 233 YIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQ 292
Query: 291 ALECFWCMR-EAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCM 349
A+E F M + G PN VTFV VLSAC H G V+EGR + M Y + P ++H+ CM
Sbjct: 293 AVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCM 352
Query: 350 VDLLGRAGLLDEAMKMVEEMPMKPNSI---VWGCLMGACETYGNVEMGEYVAKHLQALEP 406
VD+LGRAG LDEA K + ++ + +W ++GAC+ + N ++G +AK L ALEP
Sbjct: 353 VDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEP 412
Query: 407 WNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYSL 448
N G +V+LSNIYA G EV IR M L K YS+
Sbjct: 413 DNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSV 454
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 128/267 (47%), Gaps = 4/267 (1%)
Query: 123 KQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQG 182
+QVH+ + G + T I L C + ++F P P +N+VI S+
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKL 85
Query: 183 GLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDIL 242
L + + M +P T S+ +C + L++G +H + + D
Sbjct: 86 RLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVH--CHAVVSGFGLDTY 143
Query: 243 MWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAG 302
+ +LV Y KCG M+ A +VF M E+++ +W SL+ G+ +G +EA++ F+ MRE+G
Sbjct: 144 VQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESG 203
Query: 303 VRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEA 362
P+ TFV +LSAC G V G + + G+ ++ +++L R G + +A
Sbjct: 204 FEPDSATFVSLLSACAQTGAVSLGSWVHQYIIS-EGLDLNVKLGTALINLYSRCGDVGKA 262
Query: 363 MKMVEEMPMKPNSIVWGCLMGACETYG 389
++ ++M + N W ++ A T+G
Sbjct: 263 REVFDKMK-ETNVAAWTAMISAYGTHG 288
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 281 bits (720), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 163/478 (34%), Positives = 250/478 (52%), Gaps = 41/478 (8%)
Query: 8 LGRRCYSVSQRSITQTLLLDSANNPVTLIATQLCN-CTHIHQLNQV-----YAHILRTHF 61
L + C S S I LL + +A++L C N+ YA+ + +
Sbjct: 18 LLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQI 77
Query: 62 LESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIEL 121
NP F +N +IRC++ P A + ML++ + PD T P ++KA + + +
Sbjct: 78 --QNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135
Query: 122 GKQVHSLGVKIGLQTNEYCETGFINLY-------------------------------CK 150
G+Q HS V+ G Q + Y E +++Y CK
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195
Query: 151 SGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSL 210
G +AR +FDE P L +W+ +I G ++ AI +F M+R G + MVS+
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255
Query: 211 TSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDER 270
S+C +G L+ G + + Y K+ ++++ +LVDM+ +CG ++ A VF + E
Sbjct: 256 ISSCAHLGALEFGERAYE--YVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPET 313
Query: 271 NVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYF 330
+ SW+S+I G A+HGH ++A+ F M G P VTF VLSAC HGG V++G +
Sbjct: 314 DSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIY 373
Query: 331 DMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGN 390
+ MK +GI PRL+HYGC+VD+LGRAG L EA + +M +KPN+ + G L+GAC+ Y N
Sbjct: 374 ENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKN 433
Query: 391 VEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYSL 448
E+ E V L ++P + G YV+LSNIYA G W ++E +R MKE + K P +SL
Sbjct: 434 TEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSL 491
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 159/452 (35%), Positives = 239/452 (52%), Gaps = 17/452 (3%)
Query: 3 RFFFQLGRRCYSVS---QRSITQTLLLDSANNPVTLIATQLCN----CTHIHQLNQVYAH 55
RF+ L ++C Q I +L S ++ L N C + + +V+
Sbjct: 61 RFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEK 120
Query: 56 ILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQ 115
+ + F+ W +I Y++ + P +AL MLR G P+ +TL V+KA
Sbjct: 121 MPQRDFV-------TWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAA 173
Query: 116 SFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAV 175
G Q+H VK G +N + + ++LY + G A++VFD SWNA+
Sbjct: 174 ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 233
Query: 176 IGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKA 235
I G ++ A+ +F M R GF P + SL AC S G L+ G +H Y K+
Sbjct: 234 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHA--YMIKS 291
Query: 236 AERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECF 295
E+ N+L+DMY K G + A K+F + +R+V SW SL+ YA HG EA+ F
Sbjct: 292 GEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWF 351
Query: 296 WCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGR 355
MR G+RPN ++F+ VL+AC H G + EG Y+++MK GI P HY +VDLLGR
Sbjct: 352 EEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGR 410
Query: 356 AGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVL 415
AG L+ A++ +EEMP++P + +W L+ AC + N E+G Y A+H+ L+P + G +V+L
Sbjct: 411 AGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVIL 470
Query: 416 SNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
NIYA+ G W + R+R MKE + K PA S
Sbjct: 471 YNIYASGGRWNDAARVRKKMKESGVKKEPACS 502
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 278 bits (711), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 147/389 (37%), Positives = 224/389 (57%), Gaps = 8/389 (2%)
Query: 58 RTHFLESNPAP----FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAV 113
RT F E P P +W I+ Y + P AL + M + V PD L VL A
Sbjct: 174 RTVF-EGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAF 232
Query: 114 CQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWN 173
++ G+ +H+ VK+GL+ +Y K G+ +A+++FD+ P L WN
Sbjct: 233 TCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWN 292
Query: 174 AVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHA 233
A+I G ++ G AR+AI +F M PD +++ S SAC VG L+ ++ Y
Sbjct: 293 AMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYE--YVG 350
Query: 234 KAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALE 293
++ R D+ + ++L+DM+ KCG ++ A VF +R+V W+++IVGY +HG EA+
Sbjct: 351 RSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAIS 410
Query: 294 CFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLL 353
+ M GV PN VTF+G+L AC H G V+EG +F+ M + + I P+ QHY C++DLL
Sbjct: 411 LYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLL 469
Query: 354 GRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYV 413
GRAG LD+A ++++ MP++P VWG L+ AC+ + +VE+GEY A+ L +++P N G YV
Sbjct: 470 GRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYV 529
Query: 414 VLSNIYANKGMWKEVERIRSSMKEGRLAK 442
LSN+YA +W V +R MKE L K
Sbjct: 530 QLSNLYAAARLWDRVAEVRVRMKEKGLNK 558
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 183/367 (49%), Gaps = 11/367 (2%)
Query: 66 PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQV 125
P F WN IIR Y+R ++AL ++ M A V PD +T P +LKA +++G+ V
Sbjct: 82 PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFV 141
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPK--LGSWNAVIGGLSQGG 183
H+ ++G + + + G I LY K SAR VF+ P P+ + SW A++ +Q G
Sbjct: 142 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 201
Query: 184 LARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILM 243
+A+ +F MR+ PD V +VS+ +A + DL+ G +H V D+L+
Sbjct: 202 EPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI 261
Query: 244 WNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGV 303
SL MY KCG++ A +F M N+ W ++I GYA +G+ EA++ F M V
Sbjct: 262 --SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDV 319
Query: 304 RPNYVTFVGVLSACVHGGKVQEGRCYFDMM-KNVYGITPRLQHYGCMVDLLGRAGLLDEA 362
RP+ ++ +SAC G +++ R ++ + ++ Y + ++D+ + G + E
Sbjct: 320 RPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS--SALIDMFAKCGSV-EG 376
Query: 363 MKMVEEMPMKPNSIVWGCLMGACETYGNVE--MGEYVAKHLQALEPWNDGAYVVLSNIYA 420
++V + + + +VW ++ +G + Y A + P ND ++ L
Sbjct: 377 ARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHP-NDVTFLGLLMACN 435
Query: 421 NKGMWKE 427
+ GM +E
Sbjct: 436 HSGMVRE 442
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 152/321 (47%), Gaps = 51/321 (15%)
Query: 123 KQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQG 182
KQ+H+ + +GLQ + + T I+ G+ T AR VFD+ P P++ WNA+I G S+
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 183 GLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDIL 242
+DA+ ++ NM+ +PD T L AC + LQ+G +H V+ + D+
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF--RLGFDADVF 155
Query: 243 MWNSLVDMYGKCGRMDLAYKVFA--TMDERNVSSWTSLIVGYAMHGHVNEALECFWCMRE 300
+ N L+ +Y KC R+ A VF + ER + SWT+++ YA +G EALE F MR+
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215
Query: 301 AGVRPNYVTFVGVLSA-----------CVHG------------------------GKVQE 325
V+P++V V VL+A +H G+V
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275
Query: 326 GRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM---PMKPNSIVWGCLM 382
+ FD MK +P L + M+ + G EA+ M EM ++P++I +
Sbjct: 276 AKILFDKMK-----SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAI 330
Query: 383 GACETYGNVE----MGEYVAK 399
AC G++E M EYV +
Sbjct: 331 SACAQVGSLEQARSMYEYVGR 351
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 278 bits (710), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 155/408 (37%), Positives = 230/408 (56%), Gaps = 34/408 (8%)
Query: 72 NNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVK 131
N + Y R R AL + LM+ +GV PDR ++ + + Q I GK H ++
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 132 IGLQTNEYCETGFINLYCK-------------------------------SGEFTSARMV 160
G ++ + I++Y K +GE +A
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 161 FDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMR-RHGFAPDGVTMVSLTSACGSVGD 219
F+ P+ + SWN +I GL QG L +AI VF +M+ + G DGVTM+S+ SACG +G
Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 220 LQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLI 279
L L ++ Y K + D+ + +LVDM+ +CG + A +F ++ R+VS+WT+ I
Sbjct: 486 LDLAKWIY--YYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAI 543
Query: 280 VGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGI 339
AM G+ A+E F M E G++P+ V FVG L+AC HGG VQ+G+ F M ++G+
Sbjct: 544 GAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGV 603
Query: 340 TPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAK 399
+P HYGCMVDLLGRAGLL+EA++++E+MPM+PN ++W L+ AC GNVEM Y A+
Sbjct: 604 SPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAE 663
Query: 400 HLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
+Q L P G+YV+LSN+YA+ G W ++ ++R SMKE L K P S
Sbjct: 664 KIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTS 711
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 172/338 (50%), Gaps = 12/338 (3%)
Query: 63 ESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELG 122
ES F +N++IR Y A+ L + M+ +G+ PD+YT P L A +S A G
Sbjct: 94 ESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNG 153
Query: 123 KQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQG 182
Q+H L VK+G + + + ++ Y + GE SAR VFDE + + SW ++I G ++
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 183 GLARDAIRVFVNM-RRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI 241
A+DA+ +F M R P+ VTMV + SAC + DL+ G +++ + ++ E D
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS-GIEVND- 271
Query: 242 LMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREA 301
LM ++LVDMY KC +D+A ++F N+ ++ Y G EAL F M ++
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS 331
Query: 302 GVRPNYVTFVGVLSACVHGGKVQEGR-CYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLD 360
GVRP+ ++ + +S+C + G+ C+ +++N G ++D+ + D
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRN--GFESWDNICNALIDMYMKCHRQD 389
Query: 361 EAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVA 398
A ++ + M K + W ++ G VE GE A
Sbjct: 390 TAFRIFDRMSNK-TVVTWNSIVA-----GYVENGEVDA 421
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 141/294 (47%), Gaps = 7/294 (2%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLR-AGVLPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
+W ++I Y R + ++A+ L M+R V P+ T+ V+ A + +E G++V++
Sbjct: 202 SWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAF 261
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
G++ N+ + +++Y K A+ +FDE L NA+ + GL R+A
Sbjct: 262 IRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREA 321
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
+ VF M G PD ++M+S S+C + ++ G H V +I N+L+
Sbjct: 322 LGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC--NALI 379
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYV 308
DMY KC R D A+++F M + V +W S++ GY +G V+ A E F M E N V
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE----KNIV 435
Query: 309 TFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEA 362
++ ++S V G +E F M++ G+ + G G LD A
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLA 489
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 3/224 (1%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLML-RAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
+WN II + A+ + M + GV D T+ + A A++L K ++
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
K G+Q + T ++++ + G+ SA +F+ + + +W A IG ++ G A A
Sbjct: 496 IEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERA 555
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
I +F +M G PDGV V +AC G +Q G ++ + D+ + +V
Sbjct: 556 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV-HYGCMV 614
Query: 249 DMYGKCGRMDLAYKVFATMD-ERNVSSWTSLIVGYAMHGHVNEA 291
D+ G+ G ++ A ++ M E N W SL+ + G+V A
Sbjct: 615 DLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 278 bits (710), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 147/382 (38%), Positives = 222/382 (58%), Gaps = 7/382 (1%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQS-FAIELGKQVHSL 128
+WN++ + Y+ +A L+ LMLR PD T I L A CQ+ + G+ +HS
Sbjct: 223 SWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTF-INLAASCQNPETLTQGRLIHSH 281
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
+ +G + FI++Y KS + SAR++FD SW +I G ++ G +A
Sbjct: 282 AIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEA 341
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLG--LQLHTCVYHAKAAERTDILMWNS 246
+ +F M + G PD VT++SL S CG G L+ G + +Y K R ++++ N+
Sbjct: 342 LALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCK---RDNVMICNA 398
Query: 247 LVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPN 306
L+DMY KCG + A +F E+ V +WT++I GYA++G EAL+ F M + +PN
Sbjct: 399 LIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPN 458
Query: 307 YVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMV 366
++TF+ VL AC H G +++G YF +MK VY I+P L HY CMVDLLGR G L+EA++++
Sbjct: 459 HITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELI 518
Query: 367 EEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWK 426
M KP++ +WG L+ AC+ + NV++ E A+ L LEP YV ++NIYA GMW
Sbjct: 519 RNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWD 578
Query: 427 EVERIRSSMKEGRLAKVPAYSL 448
RIRS MK+ + K P S+
Sbjct: 579 GFARIRSIMKQRNIKKYPGESV 600
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 183/404 (45%), Gaps = 45/404 (11%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN ++ + + A L M + PD T+ ++++ +++L + +H++G+
Sbjct: 121 WNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGI 180
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFD--ENPDPKLGSWNAVIGGLSQGGLARDA 188
++G+ +I+ Y K G+ SA++VF+ + D + SWN++ S G A DA
Sbjct: 181 RLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDA 240
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
++ M R F PD T ++L ++C + L G +H+ H + DI N+ +
Sbjct: 241 FGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQ--DIEAINTFI 298
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYV 308
MY K A +F M R SWT +I GYA G ++EAL F M ++G +P+ V
Sbjct: 299 SMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLV 358
Query: 309 TFVGVLSACVHGGKVQEGRCYFDMMKNVYGIT-PRLQHYGCMVDLLGRAGLLDEAMKMVE 367
T + ++S C G ++ G+ + D ++YG + ++D+ + G + EA + +
Sbjct: 359 TLLSLISGCGKFGSLETGK-WIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFD 417
Query: 368 EMP----------------------------------MKPNSIVWGCLMGACETYGNVEM 393
P KPN I + ++ AC G++E
Sbjct: 418 NTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEK 477
Query: 394 G-EY--VAKHLQALEPWNDGAYVVLSNIYANKGMWKE-VERIRS 433
G EY + K + + P D Y + ++ KG +E +E IR+
Sbjct: 478 GWEYFHIMKQVYNISPGLD-HYSCMVDLLGRKGKLEEALELIRN 520
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 154/367 (41%), Gaps = 47/367 (12%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN IR P +L L M R G P+ +T P V KA + + + VH+ +
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
K ++ + T ++++ K A VF+ P+ +WNA++ G Q G A
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDM 250
+F MR + PD VT+++L + L+L +H + + + N+ +
Sbjct: 140 LFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAV--GIRLGVDVQVTVANTWIST 197
Query: 251 YGKCGRMDLAYKVFATMD--ERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYV 308
YGKCG +D A VF +D +R V SW S+ Y++ G +A + M +P+
Sbjct: 198 YGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLS 257
Query: 309 TFVGVLSAC----------------VHGGKVQE-------------------GRCYFDMM 333
TF+ + ++C +H G Q+ R FD+M
Sbjct: 258 TFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIM 317
Query: 334 KNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPM---KPNSIVWGCLMGACETYGN 390
+ ++ + M+ G +DEA+ + M KP+ + L+ C +G+
Sbjct: 318 TSRTCVS-----WTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGS 372
Query: 391 VEMGEYV 397
+E G+++
Sbjct: 373 LETGKWI 379
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 278 bits (710), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 155/408 (37%), Positives = 230/408 (56%), Gaps = 34/408 (8%)
Query: 72 NNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVK 131
N + Y R R AL + LM+ +GV PDR ++ + + Q I GK H ++
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 132 IGLQTNEYCETGFINLYCK-------------------------------SGEFTSARMV 160
G ++ + I++Y K +GE +A
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 161 FDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMR-RHGFAPDGVTMVSLTSACGSVGD 219
F+ P+ + SWN +I GL QG L +AI VF +M+ + G DGVTM+S+ SACG +G
Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 220 LQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLI 279
L L ++ Y K + D+ + +LVDM+ +CG + A +F ++ R+VS+WT+ I
Sbjct: 486 LDLAKWIY--YYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAI 543
Query: 280 VGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGI 339
AM G+ A+E F M E G++P+ V FVG L+AC HGG VQ+G+ F M ++G+
Sbjct: 544 GAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGV 603
Query: 340 TPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAK 399
+P HYGCMVDLLGRAGLL+EA++++E+MPM+PN ++W L+ AC GNVEM Y A+
Sbjct: 604 SPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAE 663
Query: 400 HLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
+Q L P G+YV+LSN+YA+ G W ++ ++R SMKE L K P S
Sbjct: 664 KIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTS 711
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 172/338 (50%), Gaps = 12/338 (3%)
Query: 63 ESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELG 122
ES F +N++IR Y A+ L + M+ +G+ PD+YT P L A +S A G
Sbjct: 94 ESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNG 153
Query: 123 KQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQG 182
Q+H L VK+G + + + ++ Y + GE SAR VFDE + + SW ++I G ++
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 183 GLARDAIRVFVNM-RRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI 241
A+DA+ +F M R P+ VTMV + SAC + DL+ G +++ + ++ E D
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS-GIEVND- 271
Query: 242 LMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREA 301
LM ++LVDMY KC +D+A ++F N+ ++ Y G EAL F M ++
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS 331
Query: 302 GVRPNYVTFVGVLSACVHGGKVQEGR-CYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLD 360
GVRP+ ++ + +S+C + G+ C+ +++N G ++D+ + D
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRN--GFESWDNICNALIDMYMKCHRQD 389
Query: 361 EAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVA 398
A ++ + M K + W ++ G VE GE A
Sbjct: 390 TAFRIFDRMSNK-TVVTWNSIVA-----GYVENGEVDA 421
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 141/294 (47%), Gaps = 7/294 (2%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLR-AGVLPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
+W ++I Y R + ++A+ L M+R V P+ T+ V+ A + +E G++V++
Sbjct: 202 SWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAF 261
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
G++ N+ + +++Y K A+ +FDE L NA+ + GL R+A
Sbjct: 262 IRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREA 321
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
+ VF M G PD ++M+S S+C + ++ G H V +I N+L+
Sbjct: 322 LGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC--NALI 379
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYV 308
DMY KC R D A+++F M + V +W S++ GY +G V+ A E F M E N V
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE----KNIV 435
Query: 309 TFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEA 362
++ ++S V G +E F M++ G+ + G G LD A
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLA 489
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 3/224 (1%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLML-RAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
+WN II + A+ + M + GV D T+ + A A++L K ++
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
K G+Q + T ++++ + G+ SA +F+ + + +W A IG ++ G A A
Sbjct: 496 IEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERA 555
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
I +F +M G PDGV V +AC G +Q G ++ + D+ + +V
Sbjct: 556 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV-HYGCMV 614
Query: 249 DMYGKCGRMDLAYKVFATMD-ERNVSSWTSLIVGYAMHGHVNEA 291
D+ G+ G ++ A ++ M E N W SL+ + G+V A
Sbjct: 615 DLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 277 bits (708), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 135/332 (40%), Positives = 206/332 (62%), Gaps = 3/332 (0%)
Query: 119 IELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGG 178
+ LG+ +HS+ ++ G + Y + ++LY G+ SA VFD+ P+ L +WN+VI G
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 179 LSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAER 238
++ G +A+ ++ M G PDG T+VSL SAC +G L LG ++H VY K
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVH--VYMIKVGLT 121
Query: 239 TDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCM 298
++ N L+D+Y +CGR++ A +F M ++N SWTSLIVG A++G EA+E F M
Sbjct: 122 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 181
Query: 299 REA-GVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAG 357
G+ P +TFVG+L AC H G V+EG YF M+ Y I PR++H+GCMVDLL RAG
Sbjct: 182 ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAG 241
Query: 358 LLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSN 417
+ +A + ++ MPM+PN ++W L+GAC +G+ ++ E+ + LEP + G YV+LSN
Sbjct: 242 QVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSN 301
Query: 418 IYANKGMWKEVERIRSSMKEGRLAKVPAYSLT 449
+YA++ W +V++IR M + KVP +SL
Sbjct: 302 MYASEQRWSDVQKIRKQMLRDGVKKVPGHSLV 333
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 116/239 (48%), Gaps = 5/239 (2%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN++I + P AL L+ M G+ PD +T+ +L A + A+ LGK+VH +
Sbjct: 57 WNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI 116
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
K+GL N + ++LY + G A+ +FDE D SW ++I GL+ G ++AI
Sbjct: 117 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIE 176
Query: 191 VFVNMRR-HGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
+F M G P +T V + AC G ++ G + + E I + +VD
Sbjct: 177 LFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIE-PRIEHFGCMVD 235
Query: 250 MYGKCGRMDLAYKVFATMD-ERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNY 307
+ + G++ AY+ +M + NV W +L+ +HG + L F ++ + PN+
Sbjct: 236 LLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG--DSDLAEFARIQILQLEPNH 292
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 274 bits (701), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 207/377 (54%), Gaps = 2/377 (0%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN ++ YT+ L+L LM + G D +TL V K FAI GKQVH+ +
Sbjct: 485 WNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAI 544
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
K G + + +G +++Y K G+ ++A+ FD P P +W +I G + G A
Sbjct: 545 KSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFH 604
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDM 250
VF MR G PD T+ +L A + L+ G Q+H D + SLVDM
Sbjct: 605 VFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCT--NDPFVGTSLVDM 662
Query: 251 YGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTF 310
Y KCG +D AY +F ++ N+++W +++VG A HG E L+ F M+ G++P+ VTF
Sbjct: 663 YAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTF 722
Query: 311 VGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMP 370
+GVLSAC H G V E + M YGI P ++HY C+ D LGRAGL+ +A ++E M
Sbjct: 723 IGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMS 782
Query: 371 MKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVER 430
M+ ++ ++ L+ AC G+ E G+ VA L LEP + AYV+LSN+YA W E++
Sbjct: 783 MEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKL 842
Query: 431 IRSSMKEGRLAKVPAYS 447
R+ MK ++ K P +S
Sbjct: 843 ARTMMKGHKVKKDPGFS 859
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 152/313 (48%), Gaps = 8/313 (2%)
Query: 94 MLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGE 153
M+ + V D+ T ++L + ++ LG+QVH + +K+GL IN+YCK +
Sbjct: 306 MVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRK 365
Query: 154 FTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSA 213
F AR VFD + L SWN+VI G++Q GL +A+ +F+ + R G PD TM S+ A
Sbjct: 366 FGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKA 425
Query: 214 CGSVGD-LQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNV 272
S+ + L L Q+H V+ K +D + +L+D Y + M A +F + ++
Sbjct: 426 ASSLPEGLSLSKQVH--VHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHN-FDL 482
Query: 273 SSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGR-CYFD 331
+W +++ GY ++ L+ F M + G R + T V C + +G+ +
Sbjct: 483 VAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAY 542
Query: 332 MMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNV 391
+K+ Y + L ++D+ + G + A + +P+ P+ + W ++ C G
Sbjct: 543 AIKSGYDLD--LWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGCIENGEE 599
Query: 392 EMGEYVAKHLQAL 404
E +V ++ +
Sbjct: 600 ERAFHVFSQMRLM 612
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 157/338 (46%), Gaps = 10/338 (2%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQ-SFAIELGKQVHSL 128
+WN++I + A+ L + +LR G+ PD+YT+ VLKA + L KQVH
Sbjct: 383 SWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVH 442
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
+KI ++ + T I+ Y ++ A ++F E + L +WNA++ G +Q
Sbjct: 443 AIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKT 501
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
+++F M + G D T+ ++ CG + + G Q+H Y K+ D+ + + ++
Sbjct: 502 LKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHA--YAIKSGYDLDLWVSSGIL 559
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYV 308
DMY KCG M A F ++ + +WT++I G +G A F MR GV P+
Sbjct: 560 DMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEF 619
Query: 309 TFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHY--GCMVDLLGRAGLLDEAMKMV 366
T + A +++GR + N + + +VD+ + G +D+A +
Sbjct: 620 TIATLAKASSCLTALEQGR---QIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLF 676
Query: 367 EEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQAL 404
+ + M N W ++ +G + + K +++L
Sbjct: 677 KRIEMM-NITAWNAMLVGLAQHGEGKETLQLFKQMKSL 713
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 6/229 (2%)
Query: 62 LESNPAPFN--WNNIIR-CYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFA 118
+S P P + W +I C E R A + M GVLPD +T+ + KA A
Sbjct: 575 FDSIPVPDDVAWTTMISGCIENGEEER-AFHVFSQMRLMGVLPDEFTIATLAKASSCLTA 633
Query: 119 IELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGG 178
+E G+Q+H+ +K+ + + T +++Y K G A +F + +WNA++ G
Sbjct: 634 LEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVG 693
Query: 179 LSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAER 238
L+Q G ++ +++F M+ G PD VT + + SAC G + + H H +
Sbjct: 694 LAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYK-HMRSMHGDYGIK 752
Query: 239 TDILMWNSLVDMYGKCGRMDLAYKVFATMD-ERNVSSWTSLIVGYAMHG 286
+I ++ L D G+ G + A + +M E + S + +L+ + G
Sbjct: 753 PEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQG 801
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 86/206 (41%), Gaps = 7/206 (3%)
Query: 110 LKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKL 169
L+ S + LGK H+ + + I++Y K G T AR VFD+ PD L
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 170 GSWNAVIGGLSQGGLA-----RDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGL 224
SWN+++ +Q + A +F +R+ +T+ + C G +
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASE 165
Query: 225 QLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAM 284
H Y K D + +LV++Y K G++ +F M R+V W ++ Y
Sbjct: 166 SFHG--YACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLE 223
Query: 285 HGHVNEALECFWCMREAGVRPNYVTF 310
G EA++ +G+ PN +T
Sbjct: 224 MGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 8/208 (3%)
Query: 70 NWNNIIRCYTR-----LEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQ 124
+WN+I+ Y + +E + A L ++ + V R TL +LK S + +
Sbjct: 107 SWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASES 166
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGL 184
H KIGL +E+ +N+Y K G+ +++F+E P + WN ++ + G
Sbjct: 167 FHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGF 226
Query: 185 ARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMW 244
+AI + G P+ +T+ L G D Q+ + A+ ++I+
Sbjct: 227 KEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSD---AGQVKSFANGNDASSVSEIIFR 283
Query: 245 NSLVDMYGKCGRMDLAYKVFATMDERNV 272
N + Y G+ K FA M E +V
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDV 311
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 81/172 (47%), Gaps = 9/172 (5%)
Query: 218 GDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTS 277
DL LG H + + E + + N+L+ MY KCG + A +VF M +R++ SW S
Sbjct: 53 SDLMLGKCTHARILTFE--ENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNS 110
Query: 278 LIVGYAMHG-----HVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDM 332
++ YA ++ +A F +R+ V + +T +L C+H G V +
Sbjct: 111 ILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGY 170
Query: 333 MKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGA 384
+ G+ G +V++ + G + E + EEMP + + ++W ++ A
Sbjct: 171 ACKI-GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKA 220
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 151/417 (36%), Positives = 232/417 (55%), Gaps = 35/417 (8%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAG--VLPDRYTLPIVLKAVCQSFAIELG 122
P F N++IR + + P + + +L +G + PD YT+ +++A E G
Sbjct: 68 KPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETG 127
Query: 123 KQVHSLGVKIGLQTNEYCETGFINLY----------------------CKS--------- 151
QVH + ++ G + + +TG I+LY C++
Sbjct: 128 LQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARC 187
Query: 152 GEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLT 211
G+ AR +F+ P+ +WNA+I G +Q G +R+A+ VF M+ G +GV M+S+
Sbjct: 188 GDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVL 247
Query: 212 SACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERN 271
SAC +G L G H+ + K + + + +LVD+Y KCG M+ A +VF M+E+N
Sbjct: 248 SACTQLGALDQGRWAHSYIERNKI--KITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKN 305
Query: 272 VSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFD 331
V +W+S + G AM+G + LE F M++ GV PN VTFV VL C G V EG+ +FD
Sbjct: 306 VYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFD 365
Query: 332 MMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNV 391
M+N +GI P+L+HYGC+VDL RAG L++A+ ++++MPMKP++ VW L+ A Y N+
Sbjct: 366 SMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNL 425
Query: 392 EMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYSL 448
E+G +K + LE N GAYV+LSNIYA+ W V +R SMK + K P S+
Sbjct: 426 ELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSV 482
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 151/402 (37%), Positives = 228/402 (56%), Gaps = 6/402 (1%)
Query: 48 QLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAG-VLPDRYTL 106
+LN ++ L + F+WN II ++R ++ L + M R V PD +TL
Sbjct: 78 KLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTL 137
Query: 107 PIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPD 166
P++L+A S + G +H L +K+G ++ + + + +Y G+ AR +FD+ P
Sbjct: 138 PLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPV 197
Query: 167 PKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQL 226
+ A+ GG Q G A + +F M GFA D V MVSL ACG +G L+ G +
Sbjct: 198 RDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSV 257
Query: 227 HT-CVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMH 285
H C+ + + + N++ DMY KC +D A+ VF M R+V SW+SLI+GY +
Sbjct: 258 HGWCI---RRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLD 314
Query: 286 GHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQH 345
G V + + F M + G+ PN VTF+GVLSAC HGG V++ YF +M+ Y I P L+H
Sbjct: 315 GDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQE-YNIVPELKH 373
Query: 346 YGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALE 405
Y + D + RAGLL+EA K +E+MP+KP+ V G ++ C+ YGNVE+GE VA+ L L+
Sbjct: 374 YASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLK 433
Query: 406 PWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
P YV L+ +Y+ G + E E +R MKE +++KVP S
Sbjct: 434 PRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCS 475
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 18/268 (6%)
Query: 134 LQTNEYCETGFINLYCKSGE-FTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVF 192
L +N + + Y K F ++ VF P + SWN +IG S+ G A +I +F
Sbjct: 62 LYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLF 121
Query: 193 VNMRRHG-FAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMY 251
+ M R PD T+ + AC + + + G +H V K + + + ++LV MY
Sbjct: 122 LRMWRESCVRPDDFTLPLILRACSASREAKSGDLIH--VLCLKLGFSSSLFVSSALVIMY 179
Query: 252 GKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFV 311
G++ A K+F M R+ +T++ GY G L F M +G + V V
Sbjct: 180 VDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMV 239
Query: 312 GVLSACVHGGKVQEGRCYFDMMKNVYGITPR------LQHYGCMVDLLGRAGLLDEAMKM 365
+L AC G ++ G K+V+G R L + D+ + +LD A +
Sbjct: 240 SLLMACGQLGALKHG-------KSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTV 292
Query: 366 VEEMPMKPNSIVWGCLMGACETYGNVEM 393
M + + I W L+ G+V M
Sbjct: 293 FVNMSRR-DVISWSSLILGYGLDGDVVM 319
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 138/379 (36%), Positives = 216/379 (56%), Gaps = 3/379 (0%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
W +I + R + A+ V M + GV + T+ VLKA + + G+ VH L
Sbjct: 171 TWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLY 230
Query: 130 VKIG-LQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
++ G ++ + + + +++Y K + A+ VFDE P + +W A+I G Q
Sbjct: 231 LETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKG 290
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
+ VF M + AP+ T+ S+ SAC VG L G ++H Y K + + +L+
Sbjct: 291 MLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVH--CYMIKNSIEINTTAGTTLI 348
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYV 308
D+Y KCG ++ A VF + E+NV +WT++I G+A HG+ +A + F+ M + V PN V
Sbjct: 349 DLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEV 408
Query: 309 TFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEE 368
TF+ VLSAC HGG V+EGR F MK + + P+ HY CMVDL GR GLL+EA ++E
Sbjct: 409 TFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIER 468
Query: 369 MPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEV 428
MPM+P ++VWG L G+C + + E+G+Y A + L+P + G Y +L+N+Y+ W EV
Sbjct: 469 MPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEV 528
Query: 429 ERIRSSMKEGRLAKVPAYS 447
R+R MK+ ++ K P +S
Sbjct: 529 ARVRKQMKDQQVVKSPGFS 547
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 119/357 (33%), Positives = 180/357 (50%), Gaps = 16/357 (4%)
Query: 94 MLRAGVLPDRYTLPIVLKAVCQSFAIELGK--QVHSLGVKIGLQTNEYCETGFINLYCKS 151
M R GV+P R+T P +LKAV F + Q H+ VK GL ++ + I+ Y S
Sbjct: 95 MRRNGVIPSRHTFPPLLKAV---FKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSS 151
Query: 152 GEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLT 211
G F A +FD D + +W A+I G + G A +A+ FV M++ G A + +T+VS+
Sbjct: 152 GLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVL 211
Query: 212 SACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERN 271
A G V D++ G +H +Y + D+ + +SLVDMYGKC D A KVF M RN
Sbjct: 212 KAAGKVEDVRFGRSVHG-LYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRN 270
Query: 272 VSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGR---C 328
V +WT+LI GY ++ + F M ++ V PN T VLSAC H G + GR C
Sbjct: 271 VVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHC 330
Query: 329 YFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETY 388
Y M+KN I ++DL + G L+EA+ + E + K N W ++ +
Sbjct: 331 Y--MIKNSIEINTTAG--TTLIDLYVKCGCLEEAILVFERLHEK-NVYTWTAMINGFAAH 385
Query: 389 GNV-EMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVP 444
G + + L + N+ ++ + + A+ G+ +E R+ SMK GR P
Sbjct: 386 GYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMK-GRFNMEP 441
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 272 bits (695), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 209/377 (55%), Gaps = 2/377 (0%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
W + YT R A+ L M+ GV PD Y + VL A ++ G+ +
Sbjct: 180 WTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYME 239
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
++ +Q N + T +NLY K G+ AR VFD + + +W+ +I G + ++ I
Sbjct: 240 EMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIE 299
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDM 250
+F+ M + PD ++V S+C S+G L LG + + + T++ M N+L+DM
Sbjct: 300 LFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLI--DRHEFLTNLFMANALIDM 357
Query: 251 YGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTF 310
Y KCG M ++VF M E+++ + I G A +GHV + F + G+ P+ TF
Sbjct: 358 YAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTF 417
Query: 311 VGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMP 370
+G+L CVH G +Q+G +F+ + VY + ++HYGCMVDL GRAG+LD+A +++ +MP
Sbjct: 418 LGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMP 477
Query: 371 MKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVER 430
M+PN+IVWG L+ C + ++ E V K L ALEPWN G YV LSNIY+ G W E
Sbjct: 478 MRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAE 537
Query: 431 IRSSMKEGRLAKVPAYS 447
+R M + + K+P YS
Sbjct: 538 VRDMMNKKGMKKIPGYS 554
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 177/359 (49%), Gaps = 6/359 (1%)
Query: 53 YAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKA 112
Y+++L +H P F +N++I + L L + + + G+ +T P+VLKA
Sbjct: 63 YSYLLFSH--TQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKA 120
Query: 113 VCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSW 172
++ + +LG +HSL VK G + T +++Y SG A +FDE PD + +W
Sbjct: 121 CTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTW 180
Query: 173 NAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYH 232
A+ G + G R+AI +F M G PD +V + SAC VGDL G + Y
Sbjct: 181 TALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWI--VKYM 238
Query: 233 AKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEAL 292
+ + + + +LV++Y KCG+M+ A VF +M E+++ +W+++I GYA + E +
Sbjct: 239 EEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGI 298
Query: 293 ECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDL 352
E F M + ++P+ + VG LS+C G + G ++ + L ++D+
Sbjct: 299 ELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDR-HEFLTNLFMANALIDM 357
Query: 353 LGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGA 411
+ G + ++ +EM K I+ + G + G+V++ V + L DG+
Sbjct: 358 YAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKN-GHVKLSFAVFGQTEKLGISPDGS 415
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 271 bits (693), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 154/449 (34%), Positives = 245/449 (54%), Gaps = 11/449 (2%)
Query: 10 RRCYSVSQRSITQTL-LLDSANNPVTLIATQLCNCTHIHQLNQVYAHILRTHFLESNPAP 68
+RC +V Q T +L ++ + I+ L H+ LN+ + + P
Sbjct: 19 QRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNS 78
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRA---GVLPDRYTLPIVLKAVCQSFAIELGKQV 125
F ++ +IR +R P LR +LM++ + P T ++ A ++ +GKQ+
Sbjct: 79 FVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQI 138
Query: 126 HSLGVKIGL-QTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGL 184
H VK G+ ++ + +TG + +Y + AR VFDE P P + W+ ++ G + GL
Sbjct: 139 HCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGL 198
Query: 185 ARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMW 244
+ + VF M G PD ++ + +AC VG L G +H V + E +D+ +
Sbjct: 199 GSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIE-SDVFVG 257
Query: 245 NSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECF-WCMREAGV 303
+LVDMY KCG ++ A +VF + RNV SW +LI GYA +G+ +A C RE G+
Sbjct: 258 TALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGI 317
Query: 304 RPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAM 363
+P+ V +GVL+AC HGG ++EGR + M+ YGITP+ +HY C+VDL+ RAG LD+A+
Sbjct: 318 KPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDAL 377
Query: 364 KMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWN----DGAYVVLSNIY 419
++E+MPMKP + VWG L+ C T+ NVE+GE ++L LE N + A V LSNIY
Sbjct: 378 DLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIY 437
Query: 420 ANKGMWKEVERIRSSMKEGRLAKVPAYSL 448
+ E ++R +++ + K P +SL
Sbjct: 438 FSVQRNPEAFKVRGMIEQRGIRKTPGWSL 466
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 271 bits (692), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 153/450 (34%), Positives = 246/450 (54%), Gaps = 11/450 (2%)
Query: 9 GRRCYSVSQRSITQTL-LLDSANNPVTLIATQLCNCTHIHQLNQVYAHILRTHFLESNPA 67
+RC +V Q T +L ++ + I+ L H+ LN+ + + P
Sbjct: 18 SQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPN 77
Query: 68 PFNWNNIIRCYTRLEAPRNALRLHVLMLRA---GVLPDRYTLPIVLKAVCQSFAIELGKQ 124
F ++ +IR +R P LR +LM++ + P T ++ A ++ +GKQ
Sbjct: 78 SFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQ 137
Query: 125 VHSLGVKIGL-QTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGG 183
+H VK G+ ++ + +TG + +Y + AR VFDE P P + W+ ++ G + G
Sbjct: 138 IHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCG 197
Query: 184 LARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILM 243
L + + VF M G PD ++ + +AC VG L G +H V K+ +D+ +
Sbjct: 198 LGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFV-KKKSWIESDVFV 256
Query: 244 WNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCM-REAG 302
+LVDMY KCG ++ A +VF + RNV SW +LI GYA +G+ +A+ C + RE G
Sbjct: 257 GTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDG 316
Query: 303 VRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEA 362
++P+ V +GVL+AC HGG ++EGR + M+ Y ITP+ +HY C+VDL+ RAG LD+A
Sbjct: 317 IKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDA 376
Query: 363 MKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWN----DGAYVVLSNI 418
+ ++E+MPMKP + VWG L+ C T+ NVE+GE K+L LE N + A V LSNI
Sbjct: 377 LNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNI 436
Query: 419 YANKGMWKEVERIRSSMKEGRLAKVPAYSL 448
Y + E ++R +++ + K P +S+
Sbjct: 437 YFSVQRNPEASKVRGMIEQRGVRKTPGWSV 466
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 271 bits (692), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 154/431 (35%), Positives = 232/431 (53%), Gaps = 37/431 (8%)
Query: 50 NQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIV 109
N VYA L H N F +N +I+ Y P ++ L+ L+ G+ P +T +
Sbjct: 31 NLVYARKLFDH--HQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFI 88
Query: 110 LKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDEN----- 164
A + + +HS + G +++ +C T I Y K G AR VFDE
Sbjct: 89 FAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDV 148
Query: 165 --------------------------PDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRR- 197
P + SW VI G SQ G +A+++F+ M +
Sbjct: 149 PVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKD 208
Query: 198 HGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRM 257
P+ +T+VS+ AC ++G+L++G +L Y + +I + N+ ++MY KCG +
Sbjct: 209 KSVKPNHITVVSVLPACANLGELEIGRRLEG--YARENGFFDNIYVCNATIEMYSKCGMI 266
Query: 258 DLAYKVFATM-DERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSA 316
D+A ++F + ++RN+ SW S+I A HG +EAL F M G +P+ VTFVG+L A
Sbjct: 267 DVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLA 326
Query: 317 CVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSI 376
CVHGG V +G+ F M+ V+ I+P+L+HYGCM+DLLGR G L EA +++ MPMKP+++
Sbjct: 327 CVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAV 386
Query: 377 VWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMK 436
VWG L+GAC +GNVE+ E ++ L LEP N G V++SNIYA W V R+R MK
Sbjct: 387 VWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMK 446
Query: 437 EGRLAKVPAYS 447
+ + K YS
Sbjct: 447 KETMTKAAGYS 457
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 150/432 (34%), Positives = 238/432 (55%), Gaps = 17/432 (3%)
Query: 12 CYSVSQRSITQTLLLDSANNPVTLIATQLCNCTHIHQLNQVYAHILRTHFLESNPAPFNW 71
CYS+ Q + L+ ++ C + +V+ H +R+ + S W
Sbjct: 419 CYSLKQEFVYNELVANA-------FVASYAKCGSLSYAQRVF-HGIRSKTVNS------W 464
Query: 72 NNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVK 131
N +I + + PR +L H+ M +G+LPD +T+ +L A + ++ LGK+VH ++
Sbjct: 465 NALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIR 524
Query: 132 IGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRV 191
L+ + + ++LY GE + + +FD D L SWN VI G Q G A+ V
Sbjct: 525 NWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGV 584
Query: 192 FVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMY 251
F M +G G++M+ + AC + L+LG + H Y K D + SL+DMY
Sbjct: 585 FRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHA--YALKHLLEDDAFIACSLIDMY 642
Query: 252 GKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFV 311
K G + + KVF + E++ +SW ++I+GY +HG EA++ F M+ G P+ +TF+
Sbjct: 643 AKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 702
Query: 312 GVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMV-EEMP 370
GVL+AC H G + EG Y D MK+ +G+ P L+HY C++D+LGRAG LD+A+++V EEM
Sbjct: 703 GVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMS 762
Query: 371 MKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVER 430
+ + +W L+ +C + N+EMGE VA L LEP YV+LSN+YA G W++V +
Sbjct: 763 EEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRK 822
Query: 431 IRSSMKEGRLAK 442
+R M E L K
Sbjct: 823 VRQRMNEMSLRK 834
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 130/279 (46%), Gaps = 12/279 (4%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRA-GVLPDRYTLPIVLKAVCQSFAIELGKQVHS 127
F WN +I Y+R E L + M+ +LPD +T P V+KA + +G VH
Sbjct: 152 FQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHG 211
Query: 128 LGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARD 187
L VK GL + + ++ Y G T A +FD P+ L SWN++I S G + +
Sbjct: 212 LVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEE 271
Query: 188 AIRVFVNMRRH----GFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILM 243
+ + M F PD T+V++ C ++ LG +H + K ++++
Sbjct: 272 SFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHG--WAVKLRLDKELVL 329
Query: 244 WNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAG- 302
N+L+DMY KCG + A +F + +NV SW +++ G++ G + + M G
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 389
Query: 303 -VRPNYVTFVGVLSACVHGG---KVQEGRCYFDMMKNVY 337
V+ + VT + + C H ++E CY + VY
Sbjct: 390 DVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVY 428
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 131/300 (43%), Gaps = 22/300 (7%)
Query: 103 RYTLPIVLKAVCQSFAIELGKQVHSL-GVKIGLQTNEYCETGFINLYCKSGEFTSARMVF 161
R L ++L+A + IE+G+++H L L+ ++ T I +Y G +R VF
Sbjct: 84 REALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVF 143
Query: 162 DENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNM-RRHGFAPDGVTMVSLTSACGSVGDL 220
D L WNAVI S+ L + + F+ M PD T + AC + D+
Sbjct: 144 DALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDV 203
Query: 221 QLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIV 280
+GL +H V E D+ + N+LV YG G + A ++F M ERN+ SW S+I
Sbjct: 204 GIGLAVHGLVVKTGLVE--DVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 261
Query: 281 GYAMHGHVNEALECFWCMRE----AGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNV 336
++ +G E+ M E P+ T V VL C ++ G K V
Sbjct: 262 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG-------KGV 314
Query: 337 YG------ITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGN 390
+G + L ++D+ + G + A +M+ +M N + W ++G G+
Sbjct: 315 HGWAVKLRLDKELVLNNALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNTMVGGFSAEGD 373
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 159/372 (42%), Gaps = 45/372 (12%)
Query: 62 LESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAG--VLPDRYTLPIVLKAV--C--Q 115
+ +N +WN ++ ++ + ML G V D T +L AV C +
Sbjct: 352 MNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVT---ILNAVPVCFHE 408
Query: 116 SFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAV 175
SF L K++H +K NE F+ Y K G + A+ VF + SWNA+
Sbjct: 409 SFLPSL-KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNAL 467
Query: 176 IGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKA 235
IGG +Q R ++ + M+ G PD T+ SL SAC + L+LG ++H +
Sbjct: 468 IGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIR-NW 526
Query: 236 AERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECF 295
ER D+ ++ S++ +Y CG + +F M+++++ SW ++I GY +G + AL F
Sbjct: 527 LER-DLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVF 585
Query: 296 WCMREAGVRPNYVTFVGVLSACVHGGKVQEGR-------------------CYFDMMKNV 336
M G++ ++ + V AC ++ GR DM
Sbjct: 586 RQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKN 645
Query: 337 YGITPRLQ-----------HYGCMVDLLGRAGLLDEAMKMVEEMPM---KPNSIVWGCLM 382
IT + + M+ G GL EA+K+ EEM P+ + + ++
Sbjct: 646 GSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVL 705
Query: 383 GACETYGNVEMG 394
AC G + G
Sbjct: 706 TACNHSGLIHEG 717
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 6/205 (2%)
Query: 210 LTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDE 269
L A G D+++G ++H V R D ++ ++ MY CG D + VF +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLV-SGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRS 148
Query: 270 RNVSSWTSLIVGYAMHGHVNEALECFWCM-REAGVRPNYVTFVGVLSACVHGGKVQEGRC 328
+N+ W ++I Y+ + +E LE F M + P++ T+ V+ AC V G
Sbjct: 149 KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 208
Query: 329 YFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETY 388
++ G+ + +V G G + +A+++ + MP + N + W ++
Sbjct: 209 VHGLVVKT-GLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPER-NLVSWNSMIRVFSDN 266
Query: 389 GNVEMGEYVAKHLQALEPWNDGAYV 413
G E E + +E DGA++
Sbjct: 267 GFSE--ESFLLLGEMMEENGDGAFM 289
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 149/383 (38%), Positives = 221/383 (57%), Gaps = 8/383 (2%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAV----CQSFAIELGKQ 124
+ WN + R T L L+ M R GV DR+T VLKA C + GK+
Sbjct: 144 YVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKE 203
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGL 184
+H+ + G ++ Y T +++Y + G A VF P + SW+A+I ++ G
Sbjct: 204 IHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGK 263
Query: 185 ARDAIRVFVNMRRH--GFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDIL 242
A +A+R F M R +P+ VTMVS+ AC S+ L+ G +H Y + + +
Sbjct: 264 AFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHG--YILRRGLDSILP 321
Query: 243 MWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAG 302
+ ++LV MYG+CG++++ +VF M +R+V SW SLI Y +HG+ +A++ F M G
Sbjct: 322 VISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANG 381
Query: 303 VRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEA 362
P VTFV VL AC H G V+EG+ F+ M +GI P+++HY CMVDLLGRA LDEA
Sbjct: 382 ASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEA 441
Query: 363 MKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANK 422
KMV++M +P VWG L+G+C +GNVE+ E ++ L ALEP N G YV+L++IYA
Sbjct: 442 AKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEA 501
Query: 423 GMWKEVERIRSSMKEGRLAKVPA 445
MW EV+R++ ++ L K+P
Sbjct: 502 QMWDEVKRVKKLLEHRGLQKLPG 524
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 152/347 (43%), Gaps = 24/347 (6%)
Query: 67 APFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVH 126
A + N +I+ + + A+R+ L P + T +++ ++ +VH
Sbjct: 45 AKISNNQLIQSLCKEGKLKQAIRV----LSQESSPSQQTYELLILCCGHRSSLSDALRVH 100
Query: 127 SLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLAR 186
+ G + + T I +Y G AR VFD+ + WNA+ L+ G
Sbjct: 101 RHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGE 160
Query: 187 DAIRVFVNMRRHGFAPDGVTMVSLTSAC----GSVGDLQLGLQLHTCVYHAKAAERTDIL 242
+ + ++ M R G D T + AC +V L G ++H + + + +
Sbjct: 161 EVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHA--HLTRRGYSSHVY 218
Query: 243 MWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFW-CMREA 301
+ +LVDMY + G +D A VF M RNV SW+++I YA +G EAL F MRE
Sbjct: 219 IMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRET 278
Query: 302 -GVRPNYVTFVGVLSACVHGGKVQEGRCY--FDMMKNVYGITPRLQHYGCMVDLLGRAGL 358
PN VT V VL AC +++G+ + + + + I P + +V + GR G
Sbjct: 279 KDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVI---SALVTMYGRCGK 335
Query: 359 LDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALE 405
L+ ++ + M + + + W L+ + +G Y K +Q E
Sbjct: 336 LEVGQRVFDRMHDR-DVVSWNSLISSYGVHG------YGKKAIQIFE 375
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 269 bits (687), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 142/408 (34%), Positives = 218/408 (53%), Gaps = 33/408 (8%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN +I Y R A +L M + V+PD L ++ A ++ + + ++ +
Sbjct: 180 WNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLI 239
Query: 131 KIGLQT-------------------------------NEYCETGFINLYCKSGEFTSARM 159
+ ++ N + T ++ Y K G A++
Sbjct: 240 ENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQV 299
Query: 160 VFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGD 219
+FD+ L W +I + ++A+RVF M G PD V+M S+ SAC ++G
Sbjct: 300 IFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGI 359
Query: 220 LQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLI 279
L +H+C+ H E +++ + N+L++MY KCG +D VF M RNV SW+S+I
Sbjct: 360 LDKAKWVHSCI-HVNGLE-SELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMI 417
Query: 280 VGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGI 339
+MHG ++AL F M++ V PN VTFVGVL C H G V+EG+ F M + Y I
Sbjct: 418 NALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNI 477
Query: 340 TPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAK 399
TP+L+HYGCMVDL GRA LL EA++++E MP+ N ++WG LM AC +G +E+G++ AK
Sbjct: 478 TPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAK 537
Query: 400 HLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
+ LEP +DGA V++SNIYA + W++V IR M+E + K S
Sbjct: 538 RILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLS 585
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/469 (23%), Positives = 212/469 (45%), Gaps = 63/469 (13%)
Query: 29 ANNPVTLIATQLCNCTHIHQLNQVYAHILRT--------------------------HFL 62
A+ I +L C ++ + Q++AHILRT +
Sbjct: 8 ASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVF 67
Query: 63 ESNPAP---FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAI 119
S P+P +N +R +R PR + + + G D+++ +LKAV + A+
Sbjct: 68 SSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSAL 127
Query: 120 ELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGL 179
G ++H + KI + + ETGF+++Y G AR VFDE + +WN +I
Sbjct: 128 FEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERY 187
Query: 180 SQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVG---------------DLQLGL 224
+ GL +A ++F M+ PD + + ++ SACG G D+++
Sbjct: 188 CRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDT 247
Query: 225 QLHT----------CVYHAKAAERT----DILMWNSLVDMYGKCGRMDLAYKVFATMDER 270
L T C+ A+ R ++ + ++V Y KCGR+D A +F +++
Sbjct: 248 HLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKK 307
Query: 271 NVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYF 330
++ WT++I Y + EAL F M +G++P+ V+ V+SAC + G + + +
Sbjct: 308 DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVH 367
Query: 331 DMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGN 390
+ +V G+ L ++++ + G LD + E+MP + N + W ++ A +G
Sbjct: 368 SCI-HVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRR-NVVSWSSMINALSMHGE 425
Query: 391 VE--MGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKE 437
+ + + +EP N+ +V + ++ G+ +E ++I +SM +
Sbjct: 426 ASDALSLFARMKQENVEP-NEVTFVGVLYGCSHSGLVEEGKKIFASMTD 473
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 268 bits (685), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 155/413 (37%), Positives = 221/413 (53%), Gaps = 37/413 (8%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVL-PDRYTLPIVLKAVCQSFAIELGKQVHSL 128
WN++I + + AL + MLR +L PDR+TL VL A + +GKQ+HS
Sbjct: 245 TWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSH 304
Query: 129 GVKIGLQ------------------------------TNEYCETGFINL---YCKSGEFT 155
V G T + GF L Y K G+
Sbjct: 305 IVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMN 364
Query: 156 SARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACG 215
A+ +F D + +W A+I G Q G +AI +F +M G P+ T+ ++ S
Sbjct: 365 QAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVAS 424
Query: 216 SVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMD-ERNVSS 274
S+ L G Q+H K+ E + + N+L+ MY K G + A + F + ER+ S
Sbjct: 425 SLASLSHGKQIHGSA--VKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVS 482
Query: 275 WTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMK 334
WTS+I+ A HGH EALE F M G+RP+++T+VGV SAC H G V +GR YFDMMK
Sbjct: 483 WTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMK 542
Query: 335 NVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMG 394
+V I P L HY CMVDL GRAGLL EA + +E+MP++P+ + WG L+ AC + N+++G
Sbjct: 543 DVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLG 602
Query: 395 EYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
+ A+ L LEP N GAY L+N+Y+ G W+E +IR SMK+GR+ K +S
Sbjct: 603 KVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFS 655
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 188/466 (40%), Gaps = 101/466 (21%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+W +I Y + A+R+ M++ G+ P ++TL VL +V + +E GK+VHS
Sbjct: 113 SWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFI 172
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIG------------ 177
VK+GL+ N +N+Y K G+ A+ VFD + SWNA+I
Sbjct: 173 VKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAM 232
Query: 178 -------------------GLSQGGLARDAIRVFVNMRRHG-FAPDGVTMVSLTSACGSV 217
G +Q G A+ +F M R +PD T+ S+ SAC ++
Sbjct: 233 AQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANL 292
Query: 218 GDLQLGLQLHTCV-------------------------------YHAKAAERTDILMWNS 246
L +G Q+H+ + + + I + +
Sbjct: 293 EKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTA 352
Query: 247 LVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPN 306
L+D Y K G M+ A +F ++ +R+V +WT++IVGY HG EA+ F M G RPN
Sbjct: 353 LLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPN 412
Query: 307 YVTFVGVLSAC-----------VHGGKVQEGRCY--------FDMMKNVYGITPRLQHYG 347
T +LS +HG V+ G Y M IT + +
Sbjct: 413 SYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFD 472
Query: 348 ------------CMVDLLGRAGLLDEAMKMVEEMPM---KPNSIVWGCLMGACETYGNVE 392
M+ L + G +EA+++ E M M +P+ I + + AC G V
Sbjct: 473 LIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVN 532
Query: 393 MGEY---VAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSM 435
G + K + + P Y + +++ G+ +E + M
Sbjct: 533 QGRQYFDMMKDVDKIIP-TLSHYACMVDLFGRAGLLQEAQEFIEKM 577
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 143/333 (42%), Gaps = 68/333 (20%)
Query: 108 IVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDP 167
++ K+V +S + VH +K GL + Y +N+Y K+G AR +FDE P
Sbjct: 19 LLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLR 78
Query: 168 KLGSWNAVIGGLSQGG------------LARD-------------------AIRVFVNMR 196
SWN V+ S+ G RD AIRV +M
Sbjct: 79 TAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMV 138
Query: 197 RHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCG- 255
+ G P T+ ++ ++ + ++ G ++H+ + K R ++ + NSL++MY KCG
Sbjct: 139 KEGIEPTQFTLTNVLASVAATRCMETGKKVHSFI--VKLGLRGNVSVSNSLLNMYAKCGD 196
Query: 256 ------------------------------RMDLAYKVFATMDERNVSSWTSLIVGYAMH 285
+MDLA F M ER++ +W S+I G+
Sbjct: 197 PMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQR 256
Query: 286 GHVNEALECFWCM-REAGVRPNYVTFVGVLSACVHGGKVQEGR-CYFDMMKNVYGITPRL 343
G+ AL+ F M R++ + P+ T VLSAC + K+ G+ + ++ + I+ +
Sbjct: 257 GYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV 316
Query: 344 QHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSI 376
++ + R G ++ A +++E+ K I
Sbjct: 317 --LNALISMYSRCGGVETARRLIEQRGTKDLKI 347
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 153/421 (36%), Positives = 224/421 (53%), Gaps = 42/421 (9%)
Query: 53 YAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRA----GVLPDRYTLPI 108
YA+ + TH + P + N +IR + L+ P NA + + + R PD +T P
Sbjct: 65 YAYSVFTH--QPCPNTYLHNTMIRALSLLDEP-NAHSIAITVYRKLWALCAKPDTFTFPF 121
Query: 109 VLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPK 168
VLK + + G+Q+H V G ++ + TG I +Y G AR +FDE
Sbjct: 122 VLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKD 181
Query: 169 LGSWNA---------------------------------VIGGLSQGGLARDAIRVFVNM 195
+ WNA VI G ++ G A +AI VF M
Sbjct: 182 VNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRM 241
Query: 196 RRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCG 255
PD VT++++ SAC +G L+LG ++ C Y + + N+++DMY K G
Sbjct: 242 LMENVEPDEVTLLAVLSACADLGSLELGERI--CSYVDHRGMNRAVSLNNAVIDMYAKSG 299
Query: 256 RMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLS 315
+ A VF ++ERNV +WT++I G A HGH EAL F M +AGVRPN VTF+ +LS
Sbjct: 300 NITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILS 359
Query: 316 ACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNS 375
AC H G V G+ F+ M++ YGI P ++HYGCM+DLLGRAG L EA ++++ MP K N+
Sbjct: 360 ACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANA 419
Query: 376 IVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSM 435
+WG L+ A + ++E+GE L LEP N G Y++L+N+Y+N G W E +R+ M
Sbjct: 420 AIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMM 479
Query: 436 K 436
K
Sbjct: 480 K 480
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 123/270 (45%), Gaps = 7/270 (2%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+W +I Y + A+ + ML V PD TL VL A ++ELG+++ S
Sbjct: 217 SWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYV 276
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
G+ I++Y KSG T A VF+ + + +W +I GL+ G +A+
Sbjct: 277 DHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEAL 336
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
+F M + G P+ VT +++ SAC VG + LG +L + +K +I + ++D
Sbjct: 337 AMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSM-RSKYGIHPNIEHYGCMID 395
Query: 250 MYGKCGRMDLAYKVFATMD-ERNVSSWTSLIVGYAMHG--HVNEALECFWCMREAGVRPN 306
+ G+ G++ A +V +M + N + W SL+ +H + E E N
Sbjct: 396 LLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGN 455
Query: 307 YVTFVGVLSACVHGGKVQEGRCYFDMMKNV 336
Y+ + S G+ E R +MMK +
Sbjct: 456 YMLLANLYSNL---GRWDESRMMRNMMKGI 482
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 147/399 (36%), Positives = 222/399 (55%), Gaps = 10/399 (2%)
Query: 53 YAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKA 112
+A L H S+ P WN + R Y+ ++P ++ ++ M R G+ P++ T P +LKA
Sbjct: 65 FARTLLLH--SSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKA 122
Query: 113 VCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSW 172
+ G+Q+ +K G + Y I+LY + + AR VFDE + + SW
Sbjct: 123 CASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSW 182
Query: 173 NAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYH 232
N+++ L + G F M F PD TMV L SACG G+L LG +H+ V
Sbjct: 183 NSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMV 240
Query: 233 AKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEAL 292
+ + + +LVDMY K G ++ A VF M ++NV +W+++IVG A +G EAL
Sbjct: 241 REL--ELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEAL 298
Query: 293 ECF-WCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVD 351
+ F M+E+ VRPNYVTF+GVL AC H G V +G YF M+ ++ I P + HYG MVD
Sbjct: 299 QLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVD 358
Query: 352 LLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVE---MGEYVAKHLQALEPWN 408
+LGRAG L+EA +++MP +P+++VW L+ AC + + + +GE V K L LEP
Sbjct: 359 ILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKR 418
Query: 409 DGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
G V+++N +A MW E +R MKE ++ K+ S
Sbjct: 419 SGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGES 457
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/415 (35%), Positives = 228/415 (54%), Gaps = 18/415 (4%)
Query: 43 CTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLML------R 96
C + +V+ I + + + +W ++IR Y +A+ L +L
Sbjct: 124 CGKLEDARKVFDEIPKRNIV-------SWTSMIRGYDLNGNALDAVSLFKDLLVDENDDD 176
Query: 97 AGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGE--F 154
+ D L V+ A + A L + +HS +K G ++ Y K GE
Sbjct: 177 DAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGV 236
Query: 155 TSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAP-DGVTMVSLTSA 213
AR +FD+ D S+N+++ +Q G++ +A VF + ++ + +T+ ++ A
Sbjct: 237 AVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLA 296
Query: 214 CGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVS 273
G L++G +H V + D+++ S++DMY KCGR++ A K F M +NV
Sbjct: 297 VSHSGALRIGKCIHDQVI--RMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVR 354
Query: 274 SWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMM 333
SWT++I GY MHGH +ALE F M ++GVRPNY+TFV VL+AC H G EG +F+ M
Sbjct: 355 SWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAM 414
Query: 334 KNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEM 393
K +G+ P L+HYGCMVDLLGRAG L +A +++ M MKP+SI+W L+ AC + NVE+
Sbjct: 415 KGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVEL 474
Query: 394 GEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYSL 448
E L L+ N G Y++LS+IYA+ G WK+VER+R MK L K P +SL
Sbjct: 475 AEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSL 529
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 151/331 (45%), Gaps = 13/331 (3%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
F+WN++I R AL M + + P R + P +KA F I GKQ H
Sbjct: 42 FSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQ 101
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
G Q++ + + I +Y G+ AR VFDE P + SW ++I G G A DA
Sbjct: 102 AFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDA 161
Query: 189 IRVFVNM------RRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDIL 242
+ +F ++ D + +VS+ SAC V L +H+ V K +
Sbjct: 162 VSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI--KRGFDRGVS 219
Query: 243 MWNSLVDMYGKCGR--MDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECF-WCMR 299
+ N+L+D Y K G + +A K+F + +++ S+ S++ YA G NEA E F ++
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 300 EAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLL 359
V N +T VL A H G ++ G+C D + + G+ + ++D+ + G +
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM-GLEDDVIVGTSIIDMYCKCGRV 338
Query: 360 DEAMKMVEEMPMKPNSIVWGCLMGACETYGN 390
+ A K + M K N W ++ +G+
Sbjct: 339 ETARKAFDRMKNK-NVRSWTAMIAGYGMHGH 368
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 266 bits (680), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 220/372 (59%), Gaps = 2/372 (0%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
W + Y+R +PR+AL ++V ML + + P +++ + LKA + +G+ +H+ V
Sbjct: 204 WAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIV 263
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
K + ++ + LY +SG F AR VFD + + +WN++I LS+ +
Sbjct: 264 KRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFN 323
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDM 250
+F M+ T+ ++ AC V L G ++H + +K E+ D+ + NSL+DM
Sbjct: 324 LFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSK--EKPDVPLLNSLMDM 381
Query: 251 YGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTF 310
YGKCG ++ + +VF M ++++SW ++ YA++G++ E + F M E+GV P+ +TF
Sbjct: 382 YGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITF 441
Query: 311 VGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMP 370
V +LS C G + G F+ MK + ++P L+HY C+VD+LGRAG + EA+K++E MP
Sbjct: 442 VALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMP 501
Query: 371 MKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVER 430
KP++ +WG L+ +C +GNV +GE AK L LEP N G YV++SNIYA+ MW V++
Sbjct: 502 FKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDK 561
Query: 431 IRSSMKEGRLAK 442
IR MK+ + K
Sbjct: 562 IREMMKQRGVKK 573
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 89/187 (47%), Gaps = 10/187 (5%)
Query: 201 APDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLA 260
P+ T L AC S L G+++ + + + + L+ + L+ ++ C R+DLA
Sbjct: 130 TPEAYT--DLLHACISAKSLHHGIKICSLILNNPSLRHNPKLL-SKLITLFSVCRRLDLA 186
Query: 261 YKVFATMDERNVSS---WTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSAC 317
K+F + + ++ + W ++ +GY+ +G +AL + M + + P + L AC
Sbjct: 187 RKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKAC 246
Query: 318 VHGGKVQEGR-CYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSI 376
V ++ GR + ++K + + Y ++ L +GL D+A K+ + M + N +
Sbjct: 247 VDLKDLRVGRGIHAQIVKRKEKVDQVV--YNVLLKLYMESGLFDDARKVFDGMSER-NVV 303
Query: 377 VWGCLMG 383
W L+
Sbjct: 304 TWNSLIS 310
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 266 bits (679), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 158/454 (34%), Positives = 229/454 (50%), Gaps = 69/454 (15%)
Query: 53 YAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKA 112
YAH + +P F N++IR Y P AL + ML V PD+Y+ VLKA
Sbjct: 92 YAHSILNRI--GSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKA 149
Query: 113 VCQSF-AIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMV----------- 160
C +F E G+Q+H L +K GL T+ + E +N+Y +SG F AR V
Sbjct: 150 -CAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVS 208
Query: 161 --------------------FDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGF 200
FDE + + SWN +I G + GL ++A VF +M
Sbjct: 209 WNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDV 268
Query: 201 A--------------------------------PDGVTMVSLTSACGSVGDLQLGLQLHT 228
PDG T+VS+ SAC S+G L G +H
Sbjct: 269 VSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVH- 327
Query: 229 CVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHV 288
VY K + + +LVDMY KCG++D A +VF +R+VS+W S+I ++HG
Sbjct: 328 -VYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLG 386
Query: 289 NEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGC 348
+ALE F M G +PN +TF+GVLSAC H G + + R F+MM +VY + P ++HYGC
Sbjct: 387 KDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGC 446
Query: 349 MVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWN 408
MVDLLGR G ++EA ++V E+P SI+ L+GAC+ +G +E E +A L L +
Sbjct: 447 MVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRD 506
Query: 409 DGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAK 442
Y +SN+YA+ G W++V R +M+ R+ +
Sbjct: 507 SSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNR 540
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 265 bits (678), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/366 (39%), Positives = 206/366 (56%), Gaps = 5/366 (1%)
Query: 85 RNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTN-EYCETG 143
A+ L ML GV P T +++A + ++ LG Q H K G + EY
Sbjct: 611 EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGIS 670
Query: 144 FINLYCKSGEFTSARMVFDENPDPK-LGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAP 202
+ +Y S T A +F E PK + W ++ G SQ G +A++ + MR G P
Sbjct: 671 LLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLP 730
Query: 203 DGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYK 262
D T V++ C + L+ G +H+ ++H A D L N+L+DMY KCG M + +
Sbjct: 731 DQATFVTVLRVCSVLSSLREGRAIHSLIFHL--AHDLDELTSNTLIDMYAKCGDMKGSSQ 788
Query: 263 VFATMDER-NVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGG 321
VF M R NV SW SLI GYA +G+ +AL+ F MR++ + P+ +TF+GVL+AC H G
Sbjct: 789 VFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAG 848
Query: 322 KVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCL 381
KV +GR F+MM YGI R+ H CMVDLLGR G L EA +E +KP++ +W L
Sbjct: 849 KVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSL 908
Query: 382 MGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLA 441
+GAC +G+ GE A+ L LEP N AYV+LSNIYA++G W++ +R M++ +
Sbjct: 909 LGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVK 968
Query: 442 KVPAYS 447
KVP YS
Sbjct: 969 KVPGYS 974
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 152/307 (49%), Gaps = 3/307 (0%)
Query: 64 SNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGK 123
S+P WN +I + + A+ M ++ V R TL VL A+ ++LG
Sbjct: 288 SSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGL 347
Query: 124 QVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGG 183
VH+ +K+GL +N Y + +++Y K + +A VF+ + WNA+I G + G
Sbjct: 348 VVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNG 407
Query: 184 LARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILM 243
+ + +F++M+ G+ D T SL S C + DL++G Q H+ + K A+ ++ +
Sbjct: 408 ESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAK--NLFV 465
Query: 244 WNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGV 303
N+LVDMY KCG ++ A ++F M +R+ +W ++I Y + +EA + F M G+
Sbjct: 466 GNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGI 525
Query: 304 RPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAM 363
+ L AC H + +G+ + G+ L ++D+ + G++ +A
Sbjct: 526 VSDGACLASTLKACTHVHGLYQGK-QVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDAR 584
Query: 364 KMVEEMP 370
K+ +P
Sbjct: 585 KVFSSLP 591
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 148/324 (45%), Gaps = 4/324 (1%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
WN II Y + E A L M G++ D L LKA + GKQVH L
Sbjct: 496 TWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLS 555
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
VK GL + + + I++Y K G AR VF P+ + S NA+I G SQ L +A+
Sbjct: 556 VKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAV 614
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
+F M G P +T ++ AC L LG Q H + + + L SL+
Sbjct: 615 VLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGI-SLLG 673
Query: 250 MYGKCGRMDLAYKVFATMDE-RNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYV 308
MY M A +F+ + +++ WT ++ G++ +G EAL+ + MR GV P+
Sbjct: 674 MYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQA 733
Query: 309 TFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEE 368
TFV VL C ++EGR ++ ++ L ++D+ + G + + ++ +E
Sbjct: 734 TFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTS-NTLIDMYAKCGDMKGSSQVFDE 792
Query: 369 MPMKPNSIVWGCLMGACETYGNVE 392
M + N + W L+ G E
Sbjct: 793 MRRRSNVVSWNSLINGYAKNGYAE 816
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 139/333 (41%), Gaps = 63/333 (18%)
Query: 61 FLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIE 120
FLE + WN+++ Y+ + P LR V + + P+++T IVL + +E
Sbjct: 120 FLEKDVTA--WNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVE 177
Query: 121 LGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLS 180
G+Q+H +K+GL+ N YC +++Y K + AR VF+ DP W + G
Sbjct: 178 FGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYV 237
Query: 181 QGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTD 240
+ GL +A+ VF MR G PD + V
Sbjct: 238 KAGLPEEAVLVFERMRDEGHRPDHLAFV-------------------------------- 265
Query: 241 ILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMRE 300
++++ Y + G++ A +F M +V +W +I G+ G A+E F+ MR+
Sbjct: 266 -----TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRK 320
Query: 301 AGVRPNYVTFVGVLSA-----------CVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCM 349
+ V+ T VLSA VH ++ G + N+Y + +
Sbjct: 321 SSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG-----LASNIYVGSS-------L 368
Query: 350 VDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLM 382
V + + ++ A K+ E + K N + W ++
Sbjct: 369 VSMYSKCEKMEAAAKVFEALEEK-NDVFWNAMI 400
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 151/327 (46%), Gaps = 22/327 (6%)
Query: 116 SFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAV 175
+ A+ +GK VHS + +G+ + ++LY K + + A FD + + +WN++
Sbjct: 73 ALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSM 131
Query: 176 IGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKA 235
+ S G +R FV++ + P+ T + S C +++ G Q+H C
Sbjct: 132 LSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIH-CSMIKMG 190
Query: 236 AERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECF 295
ER +LVDMY KC R+ A +VF + + N WT L GY G EA+ F
Sbjct: 191 LERNSYC-GGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVF 249
Query: 296 WCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGR 355
MR+ G RP+++ FV V++ + GK+++ R F M +P + + M+ G+
Sbjct: 250 ERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISGHGK 304
Query: 356 AGLLDEAMKMVEEM---PMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAY 412
G A++ M +K G ++ A N+++G V H +A++
Sbjct: 305 RGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVV--HAEAIK------L 356
Query: 413 VVLSNIYANK---GMWKEVERIRSSMK 436
+ SNIY M+ + E++ ++ K
Sbjct: 357 GLASNIYVGSSLVSMYSKCEKMEAAAK 383
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 265 bits (678), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 144/380 (37%), Positives = 218/380 (57%), Gaps = 4/380 (1%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WN+II+ Y E P A+ L M + + PD TL + + Q I + V
Sbjct: 315 SWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFT 374
Query: 130 VKIGLQTNEYC-ETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
++ G + + +Y K G SAR VF+ P+ + SWN +I G +Q G A +A
Sbjct: 375 LRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEA 434
Query: 189 IRVFVNMRRHG-FAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSL 247
I ++ M G A + T VS+ AC G L+ G++LH + K D+ + SL
Sbjct: 435 IEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLL--KNGLYLDVFVVTSL 492
Query: 248 VDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNY 307
DMYGKCGR++ A +F + N W +LI + HGH +A+ F M + GV+P++
Sbjct: 493 ADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDH 552
Query: 308 VTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVE 367
+TFV +LSAC H G V EG+ F+MM+ YGITP L+HYGCMVD+ GRAG L+ A+K ++
Sbjct: 553 ITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIK 612
Query: 368 EMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKE 427
M ++P++ +WG L+ AC +GNV++G+ ++HL +EP + G +V+LSN+YA+ G W+
Sbjct: 613 SMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEG 672
Query: 428 VERIRSSMKEGRLAKVPAYS 447
V+ IRS L K P +S
Sbjct: 673 VDEIRSIAHGKGLRKTPGWS 692
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 185/398 (46%), Gaps = 44/398 (11%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALR-LHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGK 123
N + WN +I Y R +R + ML +G+ PD T P VLKA C++ + G
Sbjct: 114 NRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKA-CRT--VIDGN 170
Query: 124 QVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGG 183
++H L +K G + Y I+LY + +AR++FDE P +GSWNA+I G Q G
Sbjct: 171 KIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSG 230
Query: 184 LARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILM 243
A++A+ + +R A D VT+VSL SAC GD G+ +H+ Y K +++ +
Sbjct: 231 NAKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHS--YSIKHGLESELFV 284
Query: 244 WNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGV 303
N L+D+Y + GR+ KVF M R++ SW S+I Y ++ A+ F MR + +
Sbjct: 285 SNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRI 344
Query: 304 RPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHY-------GCMVDLLGRA 356
+P+ +T + + S G ++ R +V G T R + +V + +
Sbjct: 345 QPDCLTLISLASILSQLGDIRACR-------SVQGFTLRKGWFLEDITIGNAVVVMYAKL 397
Query: 357 GLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLS 416
GL+D A + +P + I W ++ G +A+E +N
Sbjct: 398 GLVDSARAVFNWLP-NTDVISWNTIISGYAQNGFAS---------EAIEMYN--IMEEEG 445
Query: 417 NIYANKGMW-------KEVERIRSSMK-EGRLAKVPAY 446
I AN+G W + +R MK GRL K Y
Sbjct: 446 EIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLY 483
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 176/362 (48%), Gaps = 13/362 (3%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WN +I Y + + AL L LRA D T+ +L A ++ G +HS
Sbjct: 218 SWNAMISGYCQSGNAKEALTLSN-GLRA---MDSVTVVSLLSACTEAGDFNRGVTIHSYS 273
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
+K GL++ + I+LY + G + VFD L SWN++I AI
Sbjct: 274 IKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAI 333
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
+F MR PD +T++SL S +GD++ + K DI + N++V
Sbjct: 334 SLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLR-KGWFLEDITIGNAVVV 392
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAG-VRPNYV 308
MY K G +D A VF + +V SW ++I GYA +G +EA+E + M E G + N
Sbjct: 393 MYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQG 452
Query: 309 TFVGVLSACVHGGKVQEG-RCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVE 367
T+V VL AC G +++G + + ++KN G+ + + D+ G+ G L++A+ +
Sbjct: 453 TWVSVLPACSQAGALRQGMKLHGRLLKN--GLYLDVFVVTSLADMYGKCGRLEDALSLFY 510
Query: 368 EMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHL--QALEPWNDGAYVVLSNIYANKGMW 425
++P + NS+ W L+ +G+ E + K + + ++P + +V L + ++ G+
Sbjct: 511 QIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKP-DHITFVTLLSACSHSGLV 568
Query: 426 KE 427
E
Sbjct: 569 DE 570
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 264 bits (675), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 147/411 (35%), Positives = 223/411 (54%), Gaps = 33/411 (8%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
F+WN +I Y R++ ++ L V M R V P TL +VL A + +L K+VH
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEY 261
Query: 129 GVKIGLQTNEYCETGFINLYCKSGE-------FTS------------------------A 157
+ + + E +N Y GE F S A
Sbjct: 262 VSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLA 321
Query: 158 RMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSV 217
R FD+ P SW +I G + G +++ +F M+ G PD TMVS+ +AC +
Sbjct: 322 RTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHL 381
Query: 218 GDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTS 277
G L++G + T Y K + D+++ N+L+DMY KCG + A KVF MD+R+ +WT+
Sbjct: 382 GSLEIGEWIKT--YIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTA 439
Query: 278 LIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVY 337
++VG A +G EA++ F+ M++ ++P+ +T++GVLSAC H G V + R +F M++ +
Sbjct: 440 MVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDH 499
Query: 338 GITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYV 397
I P L HYGCMVD+LGRAGL+ EA +++ +MPM PNSIVWG L+GA + + M E
Sbjct: 500 RIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELA 559
Query: 398 AKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYSL 448
AK + LEP N Y +L NIYA WK++ +R + + + K P +SL
Sbjct: 560 AKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSL 610
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 200/421 (47%), Gaps = 47/421 (11%)
Query: 53 YAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKA 112
YA+ L E P WNN+I+ +++++ +RL++ ML+ GV PD +T P +L
Sbjct: 86 YAYKLFVKIPE--PDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNG 143
Query: 113 VCQSF-AIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGS 171
+ + A+ GK++H VK GL +N Y + + +Y G AR VFD + S
Sbjct: 144 LKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFS 203
Query: 172 WNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVY 231
WN +I G ++ ++I + V M R+ +P VT++ + SAC V D L ++H V
Sbjct: 204 WNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVS 263
Query: 232 HAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHV--- 288
K + + N+LV+ Y CG MD+A ++F +M R+V SWTS++ GY G++
Sbjct: 264 ECKT--EPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLA 321
Query: 289 ----------------------------NEALECFWCMREAGVRPNYVTFVGVLSACVHG 320
NE+LE F M+ AG+ P+ T V VL+AC H
Sbjct: 322 RTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHL 381
Query: 321 GKVQEG---RCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIV 377
G ++ G + Y D K I + ++D+ + G ++A K+ +M + +
Sbjct: 382 GSLEIGEWIKTYIDKNK----IKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR-DKFT 436
Query: 378 WGCLMGACETYGNVEMGEYVAKHLQ--ALEPWNDGAYVVLSNIYANKGMWKEVERIRSSM 435
W ++ G + V +Q +++P +D Y+ + + + GM + + + M
Sbjct: 437 WTAMVVGLANNGQGQEAIKVFFQMQDMSIQP-DDITYLGVLSACNHSGMVDQARKFFAKM 495
Query: 436 K 436
+
Sbjct: 496 R 496
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 151/327 (46%), Gaps = 25/327 (7%)
Query: 81 LEAPRNA-LRLHVLMLRAGV---LPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQT 136
L++P N+ L + +L + + + + Y+ I + VC++ + KQ+HS + G+
Sbjct: 7 LKSPFNSELSIFKALLMSTITESISNDYSRFISILGVCKT--TDQFKQLHSQSITRGVAP 64
Query: 137 NEYCETGFINLYCK--SGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVN 194
N + +C G + A +F + P+P + WN +I G S+ + +R+++N
Sbjct: 65 NPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLN 124
Query: 195 MRRHGFAPDGVTMVSLTSACG-SVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGK 253
M + G PD T L + G L G +LH V K +++ + N+LV MY
Sbjct: 125 MLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHV--VKFGLGSNLYVQNALVKMYSL 182
Query: 254 CGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGV 313
CG MD+A VF + +V SW +I GY E++E M V P VT + V
Sbjct: 183 CGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLV 242
Query: 314 LSACVHGGKVQEGRCYFDMMKNVY------GITPRLQHYGCMVDLLGRAGLLDEAMKMVE 367
LSAC KV++ D+ K V+ P L+ +V+ G +D A+++
Sbjct: 243 LSAC---SKVKDK----DLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFR 295
Query: 368 EMPMKPNSIVWGCLMGACETYGNVEMG 394
M + + I W ++ GN+++
Sbjct: 296 SMKAR-DVISWTSIVKGYVERGNLKLA 321
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 263 bits (673), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 214/381 (56%), Gaps = 8/381 (2%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+W +I+ + + A+ M G+ D+Y VL A AI GKQ+H+
Sbjct: 237 SWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACI 296
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
++ Q + Y + I++YCK A+ VFD + SW A++ G Q G A +A+
Sbjct: 297 IRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAV 356
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI---LMWNS 246
++F++M+R G PD T+ SAC +V L+ G Q +H KA I + NS
Sbjct: 357 KIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQ-----FHGKAITSGLIHYVTVSNS 411
Query: 247 LVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPN 306
LV +YGKCG +D + ++F M+ R+ SWT+++ YA G E ++ F M + G++P+
Sbjct: 412 LVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPD 471
Query: 307 YVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMV 366
VT GV+SAC G V++G+ YF +M + YGI P + HY CM+DL R+G L+EAM+ +
Sbjct: 472 GVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFI 531
Query: 367 EEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWK 426
MP P++I W L+ AC GN+E+G++ A+ L L+P + Y +LS+IYA+KG W
Sbjct: 532 NGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWD 591
Query: 427 EVERIRSSMKEGRLAKVPAYS 447
V ++R M+E + K P S
Sbjct: 592 SVAQLRRGMREKNVKKEPGQS 612
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 175/373 (46%), Gaps = 45/373 (12%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRA-GVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
WN +I Y+ A++ + M+R R TL +LK + + LGKQ+H
Sbjct: 106 WNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQV 165
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVF----DENP-------------------- 165
+K+G ++ + + +Y G + A+ VF D N
Sbjct: 166 IKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDAL 225
Query: 166 ------DPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGD 219
+ SW A+I GL+Q GLA++AI F M+ G D S+ ACG +G
Sbjct: 226 QLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGA 285
Query: 220 LQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLI 279
+ G Q+H C+ + I + ++L+DMY KC + A VF M ++NV SWT+++
Sbjct: 286 INEGKQIHACIIRTNFQDH--IYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMV 343
Query: 280 VGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGI 339
VGY G EA++ F M+ +G+ P++ T +SAC + ++EG + I
Sbjct: 344 VGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGK-----AI 398
Query: 340 TPRLQHY----GCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGN-VEMG 394
T L HY +V L G+ G +D++ ++ EM ++ +++ W ++ A +G VE
Sbjct: 399 TSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVSAYAQFGRAVETI 457
Query: 395 EYVAKHLQ-ALEP 406
+ K +Q L+P
Sbjct: 458 QLFDKMVQHGLKP 470
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 161/429 (37%), Gaps = 116/429 (27%)
Query: 37 ATQLCNCTHIHQLNQV-YAHILRTHFLESNPAP--FNWNNIIRCYTRLEAPRNALRLHVL 93
+ Q+ C + NQ Y ++ + + + P P F +NNI+ Y +++ A R+
Sbjct: 7 SVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVF-- 64
Query: 94 MLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGE 153
DR P N + + Y K+G
Sbjct: 65 --------DRIPQP-----------------------------NLFSWNNLLLAYSKAGL 87
Query: 154 FTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAP-DGVTMVSLTS 212
+ F++ PD +WN +I G S GL A++ + M R A VT++++
Sbjct: 88 ISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLK 147
Query: 213 ACGSVGDLQLGLQLH-------------------------TCVYHAKAA----ERTDILM 243
S G + LG Q+H C+ AK + + +M
Sbjct: 148 LSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVM 207
Query: 244 WNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGV 303
+NSL+ CG ++ A ++F M++ +V SW ++I G A +G EA+ECF M+ G+
Sbjct: 208 YNSLMGGLLACGMIEDALQLFRGMEKDSV-SWAAMIKGLAQNGLAKEAIECFREMKVQGL 266
Query: 304 RPNYVTFVGVLSACVHGGKVQEG-----------------------------------RC 328
+ + F VL AC G + EG +
Sbjct: 267 KMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKT 326
Query: 329 YFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMP---MKPNSIVWGCLMGAC 385
FD MK + + MV G+ G +EA+K+ +M + P+ G + AC
Sbjct: 327 VFDRMKQ-----KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC 381
Query: 386 ETYGNVEMG 394
++E G
Sbjct: 382 ANVSSLEEG 390
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 263 bits (673), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/377 (38%), Positives = 206/377 (54%), Gaps = 2/377 (0%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
W ++I + R A+ L ML G PD TL VL ++ GK++H +
Sbjct: 519 WASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTL 578
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
+ G+ + +N+Y K G AR V+D P+ S +++I G SQ GL +D
Sbjct: 579 RAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFL 638
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDM 250
+F +M GF D + S+ A + LG Q+H Y K T+ + +SL+ M
Sbjct: 639 LFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHA--YITKIGLCTEPSVGSSLLTM 696
Query: 251 YGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTF 310
Y K G +D K F+ ++ ++ +WT+LI YA HG NEAL+ + M+E G +P+ VTF
Sbjct: 697 YSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTF 756
Query: 311 VGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMP 370
VGVLSAC HGG V+E + + M YGI P +HY CMVD LGR+G L EA + M
Sbjct: 757 VGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMH 816
Query: 371 MKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVER 430
+KP+++VWG L+ AC+ +G VE+G+ AK LEP + GAY+ LSNI A G W EVE
Sbjct: 817 IKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEE 876
Query: 431 IRSSMKEGRLAKVPAYS 447
R MK + K P +S
Sbjct: 877 TRKLMKGTGVQKEPGWS 893
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 156/344 (45%), Gaps = 26/344 (7%)
Query: 34 TLIATQLCNCTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVL 93
T I C H+ + +V++ I NP+ +W ++ YT+ +AL +
Sbjct: 289 TAIVDLYAKCGHMAEAMEVFSRI-------PNPSVVSWTVMLSGYTKSNDAFSALEIFKE 341
Query: 94 MLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGE 153
M +GV + T+ V+ A + + QVH+ K G + I++Y KSG+
Sbjct: 342 MRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGD 401
Query: 154 FTSARMVFDENPD-PKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTS 212
+ VF++ D + N +I SQ AIR+F M + G D ++ SL S
Sbjct: 402 IDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLS 461
Query: 213 ACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNV 272
+ L LG Q+H Y K+ D+ + +SL +Y KCG ++ +YK+F + ++
Sbjct: 462 V---LDCLNLGKQVHG--YTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDN 516
Query: 273 SSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDM 332
+ W S+I G+ +G++ EA+ F M + G P+ T VL+ C + G
Sbjct: 517 ACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRG------ 570
Query: 333 MKNVYGITPR------LQHYGCMVDLLGRAGLLDEAMKMVEEMP 370
K ++G T R + +V++ + G L A ++ + +P
Sbjct: 571 -KEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP 613
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 176/403 (43%), Gaps = 48/403 (11%)
Query: 72 NNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVK 131
N +I +++ + P A+RL ML+ G+ D +++ +L + + LGKQVH +K
Sbjct: 422 NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLD---CLNLGKQVHGYTLK 478
Query: 132 IGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRV 191
GL + + LY K G + +F P W ++I G ++ G R+AI +
Sbjct: 479 SGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGL 538
Query: 192 FVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMY 251
F M G +PD T+ ++ + C S L G ++H Y +A + + ++LV+MY
Sbjct: 539 FSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHG--YTLRAGIDKGMDLGSALVNMY 596
Query: 252 GKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFV 311
KCG + LA +V+ + E + S +SLI GY+ HG + + F M +G +
Sbjct: 597 SKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAIS 656
Query: 312 GVLSAC-----------VHGGKVQEGRCY-------FDMMKNVYGIT------------P 341
+L A VH + G C M + +G P
Sbjct: 657 SILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGP 716
Query: 342 RLQHYGCMVDLLGRAGLLDEAMK---MVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVA 398
L + ++ + G +EA++ +++E KP+ + + ++ AC G VE +
Sbjct: 717 DLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYF-- 774
Query: 399 KHLQAL------EPWNDGAYVVLSNIYANKGMWKEVERIRSSM 435
HL ++ EP N YV + + G +E E ++M
Sbjct: 775 -HLNSMVKDYGIEPENR-HYVCMVDALGRSGRLREAESFINNM 815
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 143/322 (44%), Gaps = 13/322 (4%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN II R + L M PD YT VL A + GK V + +
Sbjct: 219 WNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVI 278
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
K G + C T ++LY K G A VF P+P + SW ++ G ++ A A+
Sbjct: 279 KCGAEDVFVC-TAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALE 337
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDM 250
+F MR G + T+ S+ SACG + Q+H V+ K+ D + +L+ M
Sbjct: 338 IFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVF--KSGFYLDSSVAAALISM 395
Query: 251 YGKCGRMDLAYKVFATMDERNVSSWTS-LIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
Y K G +DL+ +VF +D+ + + +I ++ +A+ F M + G+R + +
Sbjct: 396 YSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFS 455
Query: 310 FVGVLSA--CVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVE 367
+LS C++ GK G +K+ G+ L + L + G L+E+ K+ +
Sbjct: 456 VCSLLSVLDCLNLGKQVHGY----TLKS--GLVLDLTVGSSLFTLYSKCGSLEESYKLFQ 509
Query: 368 EMPMKPNSIVWGCLMGACETYG 389
+P K N+ W ++ YG
Sbjct: 510 GIPFKDNA-CWASMISGFNEYG 530
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 109/253 (43%), Gaps = 3/253 (1%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQ 124
P + N +I Y + +LR M G + + V+ A A +
Sbjct: 112 QPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSEL 171
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGL 184
V +K+G E E+ I+++ K+ F A VF ++ + WN +I G +
Sbjct: 172 VCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQN 231
Query: 185 ARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMW 244
+F M PD T S+ +AC S+ L+ G + V A D+ +
Sbjct: 232 YGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGA---EDVFVC 288
Query: 245 NSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVR 304
++VD+Y KCG M A +VF+ + +V SWT ++ GY ALE F MR +GV
Sbjct: 289 TAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVE 348
Query: 305 PNYVTFVGVLSAC 317
N T V+SAC
Sbjct: 349 INNCTVTSVISAC 361
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 104/225 (46%), Gaps = 8/225 (3%)
Query: 68 PFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHS 127
P + +++I Y++ ++ L M+ +G D + + +LKA S LG QVH+
Sbjct: 617 PVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHA 676
Query: 128 LGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARD 187
KIGL T + + +Y K G F + P L +W A+I +Q G A +
Sbjct: 677 YITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANE 736
Query: 188 AIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLG-LQLHTCV--YHAKAAERTDILMW 244
A++V+ M+ GF PD VT V + SAC G ++ L++ V Y + R + M
Sbjct: 737 ALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCM- 795
Query: 245 NSLVDMYGKCGRMDLAYKVFATMDER-NVSSWTSLIVGYAMHGHV 288
VD G+ GR+ A M + + W +L+ +HG V
Sbjct: 796 ---VDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEV 837
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 115/255 (45%), Gaps = 17/255 (6%)
Query: 134 LQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFV 193
L + + ++ Y SG A +FD P P + S N +I G Q L +++R F
Sbjct: 80 LPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFS 139
Query: 194 NMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLH-TCVYHAKAAERTDILMWNSLVDMYG 252
M GF + ++ S+ SAC + LQ L C + K ++ ++L+D++
Sbjct: 140 KMHFLGFEANEISYGSVISACSA---LQAPLFSELVCCHTIKMGYFFYEVVESALIDVFS 196
Query: 253 KCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVG 312
K R + AYKVF NV W ++I G + + + F M +P+ T+
Sbjct: 197 KNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSS 256
Query: 313 VLSAC-----VHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVE 367
VL+AC + GKV + R ++V+ T +VDL + G + EAM++
Sbjct: 257 VLAACASLEKLRFGKVVQARVIKCGAEDVFVCTA-------IVDLYAKCGHMAEAMEVFS 309
Query: 368 EMPMKPNSIVWGCLM 382
+P P+ + W ++
Sbjct: 310 RIP-NPSVVSWTVML 323
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 262 bits (669), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 143/411 (34%), Positives = 220/411 (53%), Gaps = 37/411 (9%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WN +I Y ++ A+ ++ LM GV PD T+ ++ + + GK+ +
Sbjct: 224 SWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYV 283
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFD--------------------------- 162
+ GL+ ++++ K G+ AR +FD
Sbjct: 284 KENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSR 343
Query: 163 ------ENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGS 216
E D L WNA+IGG Q +DA+ +F M+ PD +TM+ SAC
Sbjct: 344 KLFDDMEEKDVVL--WNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQ 401
Query: 217 VGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWT 276
+G L +G+ +H Y K + ++ + SLVDMY KCG + A VF + RN ++T
Sbjct: 402 LGALDVGIWIHR--YIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYT 459
Query: 277 SLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNV 336
++I G A+HG + A+ F M +AG+ P+ +TF+G+LSAC HGG +Q GR YF MK+
Sbjct: 460 AIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSR 519
Query: 337 YGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEY 396
+ + P+L+HY MVDLLGRAGLL+EA +++E MPM+ ++ VWG L+ C +GNVE+GE
Sbjct: 520 FNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEK 579
Query: 397 VAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
AK L L+P + G YV+L +Y MW++ +R R M E + K+P S
Sbjct: 580 AAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCS 630
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 170/360 (47%), Gaps = 38/360 (10%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVL---PDRYTLPIVLKAVCQSFAIEL 121
NP F+WN IR ++ E P+ + L+ MLR G PD +T P++ K L
Sbjct: 115 NPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSL 174
Query: 122 GKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQ 181
G + +K+ L+ + I+++ G+ +AR VFDE+P L SWN +I G +
Sbjct: 175 GHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKK 234
Query: 182 GGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI 241
G A AI V+ M G PD VTM+ L S+C +GDL G + + Y + R I
Sbjct: 235 IGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYE--YVKENGLRMTI 292
Query: 242 LMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVN------------ 289
+ N+L+DM+ KCG + A ++F +++R + SWT++I GYA G ++
Sbjct: 293 PLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK 352
Query: 290 -------------------EALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYF 330
+AL F M+ + +P+ +T + LSAC G + G +
Sbjct: 353 DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVG-IWI 411
Query: 331 DMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGN 390
Y ++ + +VD+ + G + EA+ + + + NS+ + ++G +G+
Sbjct: 412 HRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGD 470
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 223/424 (52%), Gaps = 9/424 (2%)
Query: 26 LDSANNPVTLIATQLCNCTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPR 85
DS N T + C + Q++ +L + + +WN++I Y + E P+
Sbjct: 267 FDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVV-------SWNSMIDAYVQNENPK 319
Query: 86 NALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFI 145
A+ + ML GV P ++ L A +E G+ +H L V++GL N I
Sbjct: 320 EAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLI 379
Query: 146 NLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGV 205
++YCK E +A +F + L SWNA+I G +Q G DA+ F MR PD
Sbjct: 380 SMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTF 439
Query: 206 TMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFA 265
T VS+ +A + +H V ++ ++ + +LVDMY KCG + +A +F
Sbjct: 440 TYVSVITAIAELSITHHAKWIHGVV--MRSCLDKNVFVTTALVDMYAKCGAIMIARLIFD 497
Query: 266 TMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQE 325
M ER+V++W ++I GY HG ALE F M++ ++PN VTF+ V+SAC H G V+
Sbjct: 498 MMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEA 557
Query: 326 GRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGAC 385
G F MMK Y I + HYG MVDLLGRAG L+EA + +MP+KP V+G ++GAC
Sbjct: 558 GLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGAC 617
Query: 386 ETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPA 445
+ + NV E A+ L L P + G +V+L+NIY MW++V ++R SM L K P
Sbjct: 618 QIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPG 677
Query: 446 YSLT 449
S+
Sbjct: 678 CSMV 681
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 136/257 (52%), Gaps = 2/257 (0%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
++ +++ + ++ AL+ V M V P Y +LK + +GK++H L V
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV 162
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
K G + + TG N+Y K + AR VFD P+ L SWN ++ G SQ G+AR A+
Sbjct: 163 KSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALE 222
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDM 250
+ +M P +T+VS+ A ++ + +G ++H Y ++ + + + +LVDM
Sbjct: 223 MVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHG--YAMRSGFDSLVNISTALVDM 280
Query: 251 YGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTF 310
Y KCG ++ A ++F M ERNV SW S+I Y + + EA+ F M + GV+P V+
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340
Query: 311 VGVLSACVHGGKVQEGR 327
+G L AC G ++ GR
Sbjct: 341 MGALHACADLGDLERGR 357
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 162/363 (44%), Gaps = 45/363 (12%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WN I+ Y++ R AL + M + P T+ VL AV I +GK++H
Sbjct: 203 SWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYA 262
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
++ G + T +++Y K G +AR +FD + + SWN++I Q ++A+
Sbjct: 263 MRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAM 322
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
+F M G P V+++ AC +GDL+ G +H ++ NSL+
Sbjct: 323 LIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVV--NSLIS 380
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
MY KC +D A +F + R + SW ++I+G+A +G +AL F MR V+P+ T
Sbjct: 381 MYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFT 440
Query: 310 FVGVLSAC-----------VHG------------------------GKVQEGRCYFDMMK 334
+V V++A +HG G + R FDMM
Sbjct: 441 YVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS 500
Query: 335 NVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM---PMKPNSIVWGCLMGACETYGNV 391
+ T + M+D G G A+++ EEM +KPN + + ++ AC G V
Sbjct: 501 ERHVTT-----WNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLV 555
Query: 392 EMG 394
E G
Sbjct: 556 EAG 558
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 142/306 (46%), Gaps = 29/306 (9%)
Query: 91 HVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCK 150
H L R + + Y P L S EL +Q+ L K GL + +T ++L+C+
Sbjct: 23 HFLSERNYIPANVYEHPAALLLERCSSLKEL-RQILPLVFKNGLYQEHFFQTKLVSLFCR 81
Query: 151 SGEFTSARMVFDENPDPKLGS-WNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVS 209
G A VF E D KL ++ ++ G ++ A++ FV MR P
Sbjct: 82 YGSVDEAARVF-EPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTY 140
Query: 210 LTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDE 269
L CG +L++G ++H + K+ D+ L +MY KC +++ A KVF M E
Sbjct: 141 LLKVCGDEAELRVGKEIHGLL--VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPE 198
Query: 270 RNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSAC-----------V 318
R++ SW +++ GY+ +G ALE M E ++P+++T V VL A +
Sbjct: 199 RDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEI 258
Query: 319 HGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVW 378
HG ++ G FD + N+ +VD+ + G L+ A ++ + M ++ N + W
Sbjct: 259 HGYAMRSG---FDSLVNI---------STALVDMYAKCGSLETARQLFDGM-LERNVVSW 305
Query: 379 GCLMGA 384
++ A
Sbjct: 306 NSMIDA 311
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 261 bits (668), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 140/380 (36%), Positives = 215/380 (56%), Gaps = 4/380 (1%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+W +I Y++ AL + M+R+ P+ +T VL + ++ + LGKQ+H L
Sbjct: 120 SWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLI 179
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
VK ++ + + +++Y K+G+ AR +F+ P+ + S A+I G +Q GL +A+
Sbjct: 180 VKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEAL 239
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
+F + G +P+ VT SL +A + L G Q H V + ++ NSL+D
Sbjct: 240 EMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYA--VLQNSLID 297
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMR-EAGVRPNYV 308
MY KCG + A ++F M ER SW +++VGY+ HG E LE F MR E V+P+ V
Sbjct: 298 MYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAV 357
Query: 309 TFVGVLSACVHGGKVQEGRCYFD-MMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVE 367
T + VLS C HG G FD M+ YG P +HYGC+VD+LGRAG +DEA + ++
Sbjct: 358 TLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIK 417
Query: 368 EMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKE 427
MP KP + V G L+GAC + +V++GE V + L +EP N G YV+LSN+YA+ G W +
Sbjct: 418 RMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWAD 477
Query: 428 VERIRSSMKEGRLAKVPAYS 447
V +R+ M + + K P S
Sbjct: 478 VNNVRAMMMQKAVTKEPGRS 497
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 139/282 (49%), Gaps = 6/282 (2%)
Query: 109 VLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPK 168
+L A A+ G++VH+ +K Y T + Y K AR V DE P+
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 169 LGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHT 228
+ SW A+I SQ G + +A+ VF M R P+ T ++ ++C L LG Q+H
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHG 177
Query: 229 CVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHV 288
+ K + I + +SL+DMY K G++ A ++F + ER+V S T++I GYA G
Sbjct: 178 LI--VKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLD 235
Query: 289 NEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGR-CYFDMMKNVYGITPRLQHYG 347
EALE F + G+ PNYVT+ +L+A + G+ + +++ LQ+
Sbjct: 236 EEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN-- 293
Query: 348 CMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYG 389
++D+ + G L A ++ + MP + +I W ++ +G
Sbjct: 294 SLIDMYSKCGNLSYARRLFDNMPER-TAISWNAMLVGYSKHG 334
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 209 SLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMD 268
+L +AC L+ G ++H + + T + L+ YGKC ++ A KV M
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPAT--YLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 269 ERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRC 328
E+NV SWT++I Y+ GH +EAL F M + +PN TF VL++C+ + G
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLG-- 172
Query: 329 YFDMMKNVYGITPRLQHY------GCMVDLLGRAGLLDEAMKMVEEMPMK 372
K ++G+ + + ++D+ +AG + EA ++ E +P +
Sbjct: 173 -----KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPER 217
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 261 bits (668), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 134/378 (35%), Positives = 205/378 (54%), Gaps = 2/378 (0%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+W +I YT+ AL ML G+ D L + A A++ G+Q+H+
Sbjct: 558 SWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQA 617
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
G ++ + + LY + G+ + + F++ +WNA++ G Q G +A+
Sbjct: 618 CVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEAL 677
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
RVFV M R G + T S A +++ G Q+H + T++ N+L+
Sbjct: 678 RVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVC--NALIS 735
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
MY KCG + A K F + +N SW ++I Y+ HG +EAL+ F M + VRPN+VT
Sbjct: 736 MYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVT 795
Query: 310 FVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
VGVLSAC H G V +G YF+ M + YG++P+ +HY C+VD+L RAGLL A + ++EM
Sbjct: 796 LVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEM 855
Query: 370 PMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVE 429
P+KP+++VW L+ AC + N+E+GE+ A HL LEP + YV+LSN+YA W +
Sbjct: 856 PIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARD 915
Query: 430 RIRSSMKEGRLAKVPAYS 447
R MKE + K P S
Sbjct: 916 LTRQKMKEKGVKKEPGQS 933
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 146/321 (45%), Gaps = 8/321 (2%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+W +I ++ E A+RL M G++P Y VL A + ++E+G+Q+H L
Sbjct: 255 SWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLV 314
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
+K+G ++ Y ++LY G SA +F ++N +I GLSQ G A+
Sbjct: 315 LKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAM 374
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
+F M G PD T+ SL AC + G L G QLH Y K ++ + +L++
Sbjct: 375 ELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA--YTTKLGFASNNKIEGALLN 432
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
+Y KC ++ A F + NV W ++V Y + + + F M+ + PN T
Sbjct: 433 LYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYT 492
Query: 310 FVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGC--MVDLLGRAGLLDEAMKMVE 367
+ +L C+ G ++ G + + +L Y C ++D+ + G LD A ++
Sbjct: 493 YPSILKTCIRLGDLELGE---QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILI 549
Query: 368 EMPMKPNSIVWGCLMGACETY 388
K + + W ++ Y
Sbjct: 550 RFAGK-DVVSWTTMIAGYTQY 569
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 148/322 (45%), Gaps = 4/322 (1%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
+N +I ++ A+ L M G+ PD TL ++ A + G+Q+H+
Sbjct: 357 YNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTT 416
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
K+G +N E +NLY K + +A F E + WN ++ R++ R
Sbjct: 417 KLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFR 476
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDM 250
+F M+ P+ T S+ C +GDL+LG Q+H+ + K + + + + L+DM
Sbjct: 477 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI--IKTNFQLNAYVCSVLIDM 534
Query: 251 YGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTF 310
Y K G++D A+ + ++V SWT++I GY + ++AL F M + G+R + V
Sbjct: 535 YAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGL 594
Query: 311 VGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMP 370
+SAC ++EG+ V G + L +V L R G ++E+ E+
Sbjct: 595 TNAVSACAGLQALKEGQ-QIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE 653
Query: 371 MKPNSIVWGCLMGACETYGNVE 392
N I W L+ + GN E
Sbjct: 654 AGDN-IAWNALVSGFQQSGNNE 674
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 176/394 (44%), Gaps = 45/394 (11%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQ--SFAIELGKQVH 126
F WN +I+ L V M+ V P+ T VL+A C+ S A ++ +Q+H
Sbjct: 152 FTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEA-CRGGSVAFDVVEQIH 210
Query: 127 SLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLAR 186
+ + GL+ + I+LY ++G AR VFD SW A+I GLS+
Sbjct: 211 ARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEA 270
Query: 187 DAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNS 246
+AIR+F +M G P S+ SAC + L++G QLH V K +D + N+
Sbjct: 271 EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL--KLGFSSDTYVCNA 328
Query: 247 LVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPN 306
LV +Y G + A +F+ M +R+ ++ +LI G + G+ +A+E F M G+ P+
Sbjct: 329 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388
Query: 307 YVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRA---------- 356
T ++ AC G + G+ G + G +++L +
Sbjct: 389 SNTLASLVVACSADGTLFRGQ-QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 447
Query: 357 ------------------GLLDE---AMKMVEEMPMK---PNSIVWGCLMGACETYGNVE 392
GLLD+ + ++ +M ++ PN + ++ C G++E
Sbjct: 448 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507
Query: 393 MGEYVAKHLQALEP-WNDGAYV--VLSNIYANKG 423
+GE + H Q ++ + AYV VL ++YA G
Sbjct: 508 LGEQI--HSQIIKTNFQLNAYVCSVLIDMYAKLG 539
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 150/320 (46%), Gaps = 22/320 (6%)
Query: 98 GVLPDRYTLPIVLKAVCQSF-AIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTS 156
G+ P+ TL +L+ ++ +++ G+++HS +K+GL +N + Y G+
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 157 ARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSAC-- 214
A VFDE P+ + +WN +I L+ L + +FV M P+ T + AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 215 GSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSS 274
GSV + Q+H + + + T ++ N L+D+Y + G +DLA +VF + ++ SS
Sbjct: 199 GSVA-FDVVEQIHARILYQGLRDST--VVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS 255
Query: 275 WTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMK 334
W ++I G + + EA+ F M G+ P F VLSAC K++ ++ +
Sbjct: 256 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSAC---KKIES----LEIGE 308
Query: 335 NVYGITPRL----QHYGC--MVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACET- 387
++G+ +L Y C +V L G L A + M + +++ + L+
Sbjct: 309 QLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR-DAVTYNTLINGLSQC 367
Query: 388 -YGNVEMGEYVAKHLQALEP 406
YG M + HL LEP
Sbjct: 368 GYGEKAMELFKRMHLDGLEP 387
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 153/427 (35%), Positives = 227/427 (53%), Gaps = 39/427 (9%)
Query: 57 LRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQS 116
++ H ++ +W + I TR A + M AGV P+ T I L + C
Sbjct: 25 IQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITF-IALLSGCGD 83
Query: 117 F---AIELGKQVHSLGVKIGLQTNEY-CETGFINLYCKSGEFTSARMV------------ 160
F + LG +H K+GL N T I +Y K G F AR+V
Sbjct: 84 FTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTW 143
Query: 161 -------------------FDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFA 201
FD+ P+ L SW A+I G + G +A+ F M+ G
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
Query: 202 PDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAY 261
PD V +++ +AC ++G L GL +H V + ++ + NSL+D+Y +CG ++ A
Sbjct: 204 PDYVAIIAALNACTNLGALSFGLWVHRYVLSQDF--KNNVRVSNSLIDLYCRCGCVEFAR 261
Query: 262 KVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGG 321
+VF M++R V SW S+IVG+A +G+ +E+L F M+E G +P+ VTF G L+AC H G
Sbjct: 262 QVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVG 321
Query: 322 KVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCL 381
V+EG YF +MK Y I+PR++HYGC+VDL RAG L++A+K+V+ MPMKPN +V G L
Sbjct: 322 LVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSL 381
Query: 382 MGACETYG-NVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRL 440
+ AC +G N+ + E + KHL L + YV+LSN+YA G W+ ++R MK L
Sbjct: 382 LAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGL 441
Query: 441 AKVPAYS 447
K P +S
Sbjct: 442 KKQPGFS 448
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 149/388 (38%), Positives = 208/388 (53%), Gaps = 7/388 (1%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLP-DRYTLPIVLKAVCQSFAIELGK 123
NP + N +IR ++ + P RL + R LP + + LK +S + G
Sbjct: 74 NPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGL 133
Query: 124 QVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGG 183
Q+H G ++ T ++LY T A VFDE P SWN + +
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNK 193
Query: 184 LARDAIRVFVNMRRH---GFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTD 240
RD + +F M+ PDGVT + AC ++G L G Q+H + + +
Sbjct: 194 RTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALN 253
Query: 241 ILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMRE 300
+ N+LV MY +CG MD AY+VF M ERNV SWT+LI G AM+G EA+E F M +
Sbjct: 254 --LSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLK 311
Query: 301 AGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKN-VYGITPRLQHYGCMVDLLGRAGLL 359
G+ P T G+LSAC H G V EG +FD M++ + I P L HYGC+VDLLGRA LL
Sbjct: 312 FGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLL 371
Query: 360 DEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIY 419
D+A +++ M MKP+S +W L+GAC +G+VE+GE V HL L+ G YV+L N Y
Sbjct: 372 DKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTY 431
Query: 420 ANKGMWKEVERIRSSMKEGRLAKVPAYS 447
+ G W++V +RS MKE R+ P S
Sbjct: 432 STVGKWEKVTELRSLMKEKRIHTKPGCS 459
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 119/274 (43%), Gaps = 11/274 (4%)
Query: 123 KQVHSLGVKIGLQTNEYCETGFINLYCKS---GEFTSARMVFDENPDPKLGSWNAVIGGL 179
+Q+H+L ++ L N F++ S + + VF + +P L N +I
Sbjct: 28 RQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIRAF 87
Query: 180 SQGGLARDAIRVFVNMRRHGFAPDGVTMVSLT-SACGSVGDLQLGLQLHTCVYHAKAAER 238
S + R+F ++RR+ P S C GDL GLQ+H ++
Sbjct: 88 SLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIF--SDGFL 145
Query: 239 TDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCM 298
+D L+ +L+D+Y C A KVF + +R+ SW L Y + + L F M
Sbjct: 146 SDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKM 205
Query: 299 R---EAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGR 355
+ + V+P+ VT + L AC + G + G+ D + + G++ L +V + R
Sbjct: 206 KNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFI-DENGLSGALNLSNTLVSMYSR 264
Query: 356 AGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYG 389
G +D+A ++ M + N + W L+ G
Sbjct: 265 CGSMDKAYQVFYGMRER-NVVSWTALISGLAMNG 297
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 258 bits (660), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 136/378 (35%), Positives = 212/378 (56%), Gaps = 2/378 (0%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
++N II Y + +ALR+ M + PD +TL VL + + GK++H
Sbjct: 209 SYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYV 268
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
++ G+ ++ Y + +++Y KS + VF SWN+++ G Q G +A+
Sbjct: 269 IRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEAL 328
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
R+F M P V S+ AC + L LG QLH Y + ++I + ++LVD
Sbjct: 329 RLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHG--YVLRGGFGSNIFIASALVD 386
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
MY KCG + A K+F M+ + SWT++I+G+A+HGH +EA+ F M+ GV+PN V
Sbjct: 387 MYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVA 446
Query: 310 FVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
FV VL+AC H G V E YF+ M VYG+ L+HY + DLLGRAG L+EA + +M
Sbjct: 447 FVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKM 506
Query: 370 PMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVE 429
++P VW L+ +C + N+E+ E VA+ + ++ N GAYV++ N+YA+ G WKE+
Sbjct: 507 CVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMA 566
Query: 430 RIRSSMKEGRLAKVPAYS 447
++R M++ L K PA S
Sbjct: 567 KLRLRMRKKGLRKKPACS 584
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 117/462 (25%), Positives = 194/462 (41%), Gaps = 75/462 (16%)
Query: 35 LIATQLCNCTHIH---QLNQVYAHILRTHFLE---------------------------S 64
LI T + N T I Q Q++A +RT L
Sbjct: 7 LIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLK 66
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQ 124
+P W ++IRC+T AL V M +G PD P VLK+ + G+
Sbjct: 67 SPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGES 126
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCK-----------------------SGE-------- 153
VH V++G+ + Y +N+Y K SG+
Sbjct: 127 VHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETC 186
Query: 154 -----FTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMV 208
S R VF+ P + S+N +I G +Q G+ DA+R+ M PD T+
Sbjct: 187 IMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLS 246
Query: 209 SLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMD 268
S+ D+ G ++H Y + +D+ + +SLVDMY K R++ + +VF+ +
Sbjct: 247 SVLPIFSEYVDVIKGKEIHG--YVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLY 304
Query: 269 ERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGR- 327
R+ SW SL+ GY +G NEAL F M A V+P V F V+ AC H + G+
Sbjct: 305 CRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQ 364
Query: 328 CYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVW-GCLMG-AC 385
+ +++ +G + +VD+ + G + A K+ + M + + + W +MG A
Sbjct: 365 LHGYVLRGGFGSNIFIA--SALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMGHAL 421
Query: 386 ETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKE 427
+G+ + + Q ++P N A+V + ++ G+ E
Sbjct: 422 HGHGHEAVSLFEEMKRQGVKP-NQVAFVAVLTACSHVGLVDE 462
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 258 bits (659), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 144/420 (34%), Positives = 226/420 (53%), Gaps = 43/420 (10%)
Query: 69 FNWNNIIRCYTR-LEAPR--NALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQV 125
F WN IIR + +P+ + + +++ M V PD +T P +L + + LG++
Sbjct: 25 FLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRT 84
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLA 185
H+ + GL + + T +N+Y G+ SA+ VFD++ L +WN+V+ ++ GL
Sbjct: 85 HAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLI 144
Query: 186 RDAIRVFVNMRR----------HGFA--------------------------PDGVTMVS 209
DA ++F M +G+ P+ TM +
Sbjct: 145 DDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMST 204
Query: 210 LTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATM-D 268
+ SACG +G L+ G +H Y K DI++ +L+DMY KCG ++ A +VF +
Sbjct: 205 VLSACGRLGALEQGKWVHA--YIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGS 262
Query: 269 ERNVSSWTSLIVGYAMHGHVNEALECFWCMREA-GVRPNYVTFVGVLSACVHGGKVQEGR 327
+++V +++++I AM+G +E + F M + + PN VTFVG+L ACVH G + EG+
Sbjct: 263 KKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGK 322
Query: 328 CYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACET 387
YF MM +GITP +QHYGCMVDL GR+GL+ EA + MPM+P+ ++WG L+
Sbjct: 323 SYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRM 382
Query: 388 YGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
G+++ E K L L+P N GAYV+LSN+YA G W EV+ IR M+ + KVP S
Sbjct: 383 LGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCS 442
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 258 bits (659), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 132/366 (36%), Positives = 204/366 (55%), Gaps = 3/366 (0%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
W +++ Y + RL LM G+ D TL ++KA FA ++GK VH + +
Sbjct: 178 WGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSI 237
Query: 131 KIG-LQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
+ + ++Y + I++Y K +AR +F+ + D + W +I G ++ A +A
Sbjct: 238 RRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAF 297
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
+F M R P+ T+ ++ +C S+G L+ G +H Y + D + + S +D
Sbjct: 298 DLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHG--YMIRNGIEMDAVNFTSFID 355
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
MY +CG + +A VF M ERNV SW+S+I + ++G EAL+CF M+ V PN VT
Sbjct: 356 MYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVT 415
Query: 310 FVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
FV +LSAC H G V+EG F+ M YG+ P +HY CMVDLLGRAG + EA ++ M
Sbjct: 416 FVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNM 475
Query: 370 PMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVE 429
P+KP + WG L+ AC + V++ +A+ L ++EP YV+LSNIYA+ GMW+ V
Sbjct: 476 PVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVN 535
Query: 430 RIRSSM 435
+R M
Sbjct: 536 CVRRKM 541
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 162/365 (44%), Gaps = 46/365 (12%)
Query: 70 NWNNIIRCYTRLEA--PRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHS 127
+WN I+ Y++ + + L L+ M R D + L +KA +E G +H
Sbjct: 74 SWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHG 133
Query: 128 LGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARD 187
L +K GL ++Y + +Y + G SA+ VFDE P W ++ G + +
Sbjct: 134 LAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPE 193
Query: 188 AIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSL 247
R+F MR G A D +T++ L ACG+V ++G +H +++D L S+
Sbjct: 194 VFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQ-ASI 252
Query: 248 VDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNY 307
+DMY KC +D A K+F T +RNV WT+LI G+A EA + F M + PN
Sbjct: 253 IDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQ 312
Query: 308 VTFVGVLSAC-----------VHG------------------------GKVQEGRCYFDM 332
T +L +C VHG G +Q R FDM
Sbjct: 313 CTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDM 372
Query: 333 MKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMK---PNSIVWGCLMGACETYG 389
M I+ + M++ G GL +EA+ +M + PNS+ + L+ AC G
Sbjct: 373 MPERNVIS-----WSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSG 427
Query: 390 NVEMG 394
NV+ G
Sbjct: 428 NVKEG 432
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 227 HTCVYHAKA---AERTDILMWNSLVDMYGKCGRMDLAYKVFATMD--ERNVSSWTSLIVG 281
HT HAK ++++ +SL + Y + R+D A F + +RN SW +++ G
Sbjct: 22 HTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSG 81
Query: 282 YAMHGHV--NEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDM-MKNVYG 338
Y+ ++ L + MR + V + ACV G ++ G + MKN G
Sbjct: 82 YSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKN--G 139
Query: 339 ITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLM 382
+ +V++ + G ++ A K+ +E+P++ NS++WG LM
Sbjct: 140 LDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVR-NSVLWGVLM 182
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 258 bits (658), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 142/382 (37%), Positives = 207/382 (54%), Gaps = 5/382 (1%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WN++I Y + + AL L+ M+ G D +TL VL A+ + G+Q H
Sbjct: 207 SWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKL 266
Query: 130 VKIGLQTNEYCETGFINLYCKSGE---FTSARMVFDENPDPKLGSWNAVIGGLSQGG-LA 185
+K G N + +G I+ Y K G + VF E P L WN +I G S L+
Sbjct: 267 IKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELS 326
Query: 186 RDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWN 245
+A++ F M+R G PD + V +TSAC ++ Q+H + I + N
Sbjct: 327 EEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNR-ISVNN 385
Query: 246 SLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRP 305
+L+ +Y K G + A VF M E N S+ +I GYA HGH EAL + M ++G+ P
Sbjct: 386 ALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAP 445
Query: 306 NYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKM 365
N +TFV VLSAC H GKV EG+ YF+ MK + I P +HY CM+DLLGRAG L+EA +
Sbjct: 446 NKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERF 505
Query: 366 VEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMW 425
++ MP KP S+ W L+GAC + N+ + E A L ++P YV+L+N+YA+ W
Sbjct: 506 IDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKW 565
Query: 426 KEVERIRSSMKEGRLAKVPAYS 447
+E+ +R SM+ R+ K P S
Sbjct: 566 EEMASVRKSMRGKRIRKKPGCS 587
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 185/439 (42%), Gaps = 64/439 (14%)
Query: 55 HILRTHFLE-SNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAV 113
HI R F E P ++N +I Y A+ L M + G D +TL ++ A
Sbjct: 91 HIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAAC 150
Query: 114 CQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVF---DENPDPKLG 170
C ++L KQ+H V G + F+ Y K G A VF DE D
Sbjct: 151 CDR--VDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEV-- 206
Query: 171 SWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCV 230
SWN++I Q A+ ++ M GF D T+ S+ +A S+ L G Q H +
Sbjct: 207 SWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKL 266
Query: 231 YHAKAAERTDILMWNSLVDMYGKCGRMDLAY---KVFATMDERNVSSWTSLIVGYAMHGH 287
A + + + + L+D Y KCG D Y KVF + ++ W ++I GY+M+
Sbjct: 267 IKAGFHQNSHV--GSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEE 324
Query: 288 VN-EALECFWCMREAGVRPNYVTFVGVLSAC-----------VHG--------------- 320
++ EA++ F M+ G RP+ +FV V SAC +HG
Sbjct: 325 LSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVN 384
Query: 321 ----------GKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM- 369
G +Q+ R FD M + ++ + CM+ + G EA+ + + M
Sbjct: 385 NALISLYYKSGNLQDARWVFDRMPELNAVS-----FNCMIKGYAQHGHGTEALLLYQRML 439
Query: 370 --PMKPNSIVWGCLMGACETYGNVEMG-EY--VAKHLQALEPWNDGAYVVLSNIYANKGM 424
+ PN I + ++ AC G V+ G EY K +EP + Y + ++ G
Sbjct: 440 DSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAE-HYSCMIDLLGRAGK 498
Query: 425 WKEVERIRSSM--KEGRLA 441
+E ER +M K G +A
Sbjct: 499 LEEAERFIDAMPYKPGSVA 517
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 142/334 (42%), Gaps = 46/334 (13%)
Query: 108 IVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSAR--------- 158
++LK+V + + GK +H+L VK + ++ Y F+NLY K G + AR
Sbjct: 14 LLLKSVAER-DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEP 72
Query: 159 ----------------------MVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMR 196
+FDE P P S+N +I G + A+ +F MR
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132
Query: 197 RHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGR 256
+ GF DG T+ L +AC DL QLH + + + N+ V Y K G
Sbjct: 133 KLGFEVDGFTLSGLIAACCDRVDLI--KQLH--CFSVSGGFDSYSSVNNAFVTYYSKGGL 188
Query: 257 MDLAYKVFATMDE-RNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLS 315
+ A VF MDE R+ SW S+IV Y H +AL + M G + + T VL+
Sbjct: 189 LREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLN 248
Query: 316 ACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGC-MVDLLGRAGLLD---EAMKMVEEMPM 371
A + GR + K + + H G ++D + G D ++ K+ +E+ +
Sbjct: 249 ALTSLDHLIGGRQFHG--KLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEI-L 305
Query: 372 KPNSIVWGCLMGACETYGNVEMGEYVAKHLQALE 405
P+ +VW ++ N E+ E K + ++
Sbjct: 306 SPDLVVWNTMISGYSM--NEELSEEAVKSFRQMQ 337
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 136/396 (34%), Positives = 223/396 (56%), Gaps = 4/396 (1%)
Query: 53 YAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGV-LPDRYTLPIVLK 111
+A +L HF +S+P+ +WN +IR ++ +P N++ + ML + V PD +T LK
Sbjct: 57 HAQLLFDHF-DSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALK 115
Query: 112 AVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGS 171
+ + +I ++H ++ G + T + Y +G A VFDE P L S
Sbjct: 116 SCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVS 175
Query: 172 WNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVY 231
WN +I S GL A+ ++ M G D T+V+L S+C V L +G+ LH
Sbjct: 176 WNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIAC 235
Query: 232 HAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEA 291
+ + + + N+L+DMY KCG ++ A VF M +R+V +W S+I+GY +HGH EA
Sbjct: 236 DIRC--ESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEA 293
Query: 292 LECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVD 351
+ F M +GVRPN +TF+G+L C H G V+EG +F++M + + +TP ++HYGCMVD
Sbjct: 294 ISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVD 353
Query: 352 LLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGA 411
L GRAG L+ +++M+ + ++W L+G+C+ + N+E+GE K L LE +N G
Sbjct: 354 LYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGD 413
Query: 412 YVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
YV++++IY+ + +R ++ L VP +S
Sbjct: 414 YVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWS 449
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/413 (34%), Positives = 218/413 (52%), Gaps = 37/413 (8%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WN I+ + R + A+ + + G PD+ T+ VL +V S + +G+ +H
Sbjct: 219 SWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYV 278
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLG------------------- 170
+K GL ++ + I++Y KSG +F++ + G
Sbjct: 279 IKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKAL 338
Query: 171 ----------------SWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSAC 214
SW ++I G +Q G +A+ +F M+ G P+ VT+ S+ AC
Sbjct: 339 EMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPAC 398
Query: 215 GSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSS 274
G++ L G H + + ++ + ++L+DMY KCGR++L+ VF M +N+
Sbjct: 399 GNIAALGHGRSTHG--FAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVC 456
Query: 275 WTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMK 334
W SL+ G++MHG E + F + ++P++++F +LSAC G EG YF MM
Sbjct: 457 WNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMS 516
Query: 335 NVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMG 394
YGI PRL+HY CMV+LLGRAG L EA +++EMP +P+S VWG L+ +C NV++
Sbjct: 517 EEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLA 576
Query: 395 EYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
E A+ L LEP N G YV+LSNIYA KGMW EV+ IR+ M+ L K P S
Sbjct: 577 EIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCS 629
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 174/409 (42%), Gaps = 88/409 (21%)
Query: 62 LESNPAP--FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAI 119
L+S P P ++++++I T+ + ++ + M G++PD + LP + K + A
Sbjct: 73 LQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAF 132
Query: 120 ELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDP------------ 167
++GKQ+H + GL + + + ++Y + G AR VFD D
Sbjct: 133 KVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAY 192
Query: 168 -----------------------KLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDG 204
+ SWN ++ G ++ G ++A+ +F + GF PD
Sbjct: 193 ARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQ 252
Query: 205 VTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGR-------- 256
VT+ S+ + G L +G +H Y K D + ++++DMYGK G
Sbjct: 253 VTVSSVLPSVGDSEMLNMGRLIHG--YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLF 310
Query: 257 -----------------------MDLAYKVFATMDER----NVSSWTSLIVGYAMHGHVN 289
+D A ++F E+ NV SWTS+I G A +G
Sbjct: 311 NQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDI 370
Query: 290 EALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQ----- 344
EALE F M+ AGV+PN+VT +L AC + + GR + +G R+
Sbjct: 371 EALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGR-------STHGFAVRVHLLDNV 423
Query: 345 HYG-CMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVE 392
H G ++D+ + G ++ + + MP K N + W LM +G +
Sbjct: 424 HVGSALIDMYAKCGRINLSQIVFNMMPTK-NLVCWNSLMNGFSMHGKAK 471
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 144/356 (40%), Gaps = 83/356 (23%)
Query: 124 QVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGG 183
Q H+ +K G Q + Y I Y F A +V PDP + S++++I L++
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 184 LARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLH--TCVYHAKAAERTDI 241
L +I VF M HG PD + +L C + ++G Q+H +CV + D
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCV----SGLDMDA 151
Query: 242 LMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREA 301
+ S+ MY +CGRM A KVF M +++V + ++L+ YA G + E + M +
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 302 GVRPNYVTFVGVLSA--------------------------------------------- 316
G+ N V++ G+LS
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG 271
Query: 317 -CVHGGKVQEG----RCYFDMMKN-------VYGITPRLQHYGCM--------VDLLGRA 356
+HG +++G +C M + VYGI + M + L R
Sbjct: 272 RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331
Query: 357 GLLDEAMKMVE---EMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWND 409
GL+D+A++M E E M+ N + W ++ C G K ++ALE + +
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNG---------KDIEALELFRE 378
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 221/381 (58%), Gaps = 10/381 (2%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WN++I Y+ ++A+ L M G PD TL +L A + G+ + +
Sbjct: 200 SWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMA 259
Query: 130 V--KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARD 187
+ KIGL T + + I++Y K G+ SAR VF++ +W A+I SQ G + +
Sbjct: 260 ITKKIGLST--FLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSE 317
Query: 188 AIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSL 247
A ++F M + G +PD T+ ++ SACGSVG L+LG Q+ T + ++ + + +I + L
Sbjct: 318 AFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIET--HASELSLQHNIYVATGL 375
Query: 248 VDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNY 307
VDMYGKCGR++ A +VF M +N ++W ++I YA GH EAL F M V P+
Sbjct: 376 VDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSD 432
Query: 308 VTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVE 367
+TF+GVLSACVH G V +G YF M +++G+ P+++HY ++DLL RAG+LDEA + +E
Sbjct: 433 ITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFME 492
Query: 368 EMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQAL-EPWNDGAYVVLSNIYANKGMWK 426
P KP+ I+ ++GAC +V + E + L + E N G YV+ SN+ A+ MW
Sbjct: 493 RFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWD 552
Query: 427 EVERIRSSMKEGRLAKVPAYS 447
E ++R+ M++ + K P S
Sbjct: 553 ESAKMRALMRDRGVVKTPGCS 573
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 127/398 (31%), Positives = 201/398 (50%), Gaps = 26/398 (6%)
Query: 3 RFFFQLGRRCYSVSQ-RSITQTLLLDSANNPVTLIATQLCNCTHIHQLNQVYAHILRTHF 61
R F L ++C SV+Q R I +LL S P LI + N Y+ L +
Sbjct: 38 RDFLFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIP----KAVELGDFN--YSSFLFS-- 89
Query: 62 LESNPAPFNWNNIIRCYTRL-EAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIE 120
+ P +++N +IR T AL L+ M +G+ PD++T V A + I
Sbjct: 90 VTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIG 149
Query: 121 LGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLS 180
+G+ VHS K+GL+ + + I +Y K G+ AR +FDE + SWN++I G S
Sbjct: 150 VGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYS 209
Query: 181 QGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTD 240
+ G A+DA+ +F M GF PD T+VS+ AC +GDL+ G L K T
Sbjct: 210 EAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLST- 268
Query: 241 ILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMRE 300
+ + L+ MYGKCG +D A +VF M +++ +WT++I Y+ +G +EA + F+ M +
Sbjct: 269 -FLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEK 327
Query: 301 AGVRPNYVTFVGVLSACVHGGKVQEGR------CYFDMMKNVYGITPRLQHYGCMVDLLG 354
GV P+ T VLSAC G ++ G+ + N+Y T +VD+ G
Sbjct: 328 TGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATG-------LVDMYG 380
Query: 355 RAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVE 392
+ G ++EA+++ E MP+K N W ++ A G+ +
Sbjct: 381 KCGRVEEALRVFEAMPVK-NEATWNAMITAYAHQGHAK 417
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 255 bits (652), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 129/386 (33%), Positives = 217/386 (56%), Gaps = 3/386 (0%)
Query: 64 SNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGK 123
+P F++N +IR Y + + AL + M++ G PD +T P +LKA + +I GK
Sbjct: 93 DDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGK 152
Query: 124 QVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGG 183
Q+H K+GL+ + + + IN+Y + GE + VF++ SW++++ + G
Sbjct: 153 QIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMG 212
Query: 184 LARDAIRVFVNM-RRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDIL 242
+ + + +F M + MVS AC + G L LG+ +H + + +I+
Sbjct: 213 MWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHG--FLLRNISELNII 270
Query: 243 MWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAG 302
+ SLVDMY KCG +D A +F M++RN +++++I G A+HG AL F M + G
Sbjct: 271 VQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEG 330
Query: 303 VRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEA 362
+ P++V +V VL+AC H G V+EGR F M + P +HYGC+VDLLGRAGLL+EA
Sbjct: 331 LEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEA 390
Query: 363 MKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANK 422
++ ++ +P++ N ++W + C N+E+G+ A+ L L N G Y+++SN+Y+
Sbjct: 391 LETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQG 450
Query: 423 GMWKEVERIRSSMKEGRLAKVPAYSL 448
MW +V R R+ + L + P +S+
Sbjct: 451 QMWDDVARTRTEIAIKGLKQTPGFSI 476
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 255 bits (652), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 118/310 (38%), Positives = 193/310 (62%), Gaps = 6/310 (1%)
Query: 142 TGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNM-RRHGF 200
T ++ Y +SG+ ++A +F++ P+ + SWNA++ +Q GL +A+ +F M
Sbjct: 197 TAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSI 256
Query: 201 APDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLA 260
P+ VT+V + SAC G LQL +H Y + +D+ + NSLVD+YGKCG ++ A
Sbjct: 257 RPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLS--SDVFVSNSLVDLYGKCGNLEEA 314
Query: 261 YKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGV---RPNYVTFVGVLSAC 317
VF ++++++W S+I +A+HG EA+ F M + + +P+++TF+G+L+AC
Sbjct: 315 SSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNAC 374
Query: 318 VHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIV 377
HGG V +GR YFD+M N +GI PR++HYGC++DLLGRAG DEA++++ M MK + +
Sbjct: 375 THGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAI 434
Query: 378 WGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKE 437
WG L+ AC+ +G++++ E K+L AL P N G +++N+Y G W+E R R +K
Sbjct: 435 WGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKH 494
Query: 438 GRLAKVPAYS 447
K P +S
Sbjct: 495 QNAYKPPGWS 504
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 128/279 (45%), Gaps = 11/279 (3%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLML-RAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
+WN I+ T+ A+ L M+ + P+ T+ VL A Q+ ++L K +H+
Sbjct: 226 SWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAF 285
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
+ L ++ + ++LY K G A VF L +WN++I + G + +A
Sbjct: 286 AYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEA 345
Query: 189 IRVFVNMRR---HGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWN 245
I VF M + + PD +T + L +AC G + G + + E I +
Sbjct: 346 IAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIE-PRIEHYG 404
Query: 246 SLVDMYGKCGRMDLAYKVFATMDER-NVSSWTSLIVGYAMHGHVNEALECFWCMREAGVR 304
L+D+ G+ GR D A +V +TM + + + W SL+ +HGH++ A + +
Sbjct: 405 CLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNL--VALN 462
Query: 305 PNYVTFVGVLSACVHG--GKVQEGRCYFDMMKNVYGITP 341
PN +V ++ A ++G G +E R M+K+ P
Sbjct: 463 PNNGGYVAMM-ANLYGEMGNWEEARRARKMIKHQNAYKP 500
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 127/328 (38%), Gaps = 59/328 (17%)
Query: 123 KQVHSLGVKIGLQTNEYCETGFINLYC--KSGEFTSARMVFDENPDPKLGSWNAVIGGLS 180
KQV S + GL + + + +C + + AR +FD P + AV+ S
Sbjct: 41 KQVQSFMIVSGLSHSHFLCFKLLR-FCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTAYS 99
Query: 181 -----QGGLARDAIRVFVNMR----RHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVY 231
A R+ VN H P + S+ S +HT ++
Sbjct: 100 SSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTP------LVHTHLF 153
Query: 232 HAKAAERTDILMWNSLVDMYGKC-GRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNE 290
K+ +++ +L+ Y + LA ++F M ERNV SWT+++ GYA G ++
Sbjct: 154 --KSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISN 211
Query: 291 ALECFWCM--------------------------------REAGVRPNYVTFVGVLSACV 318
A+ F M E +RPN VT V VLSAC
Sbjct: 212 AVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACA 271
Query: 319 HGGKVQ--EGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSI 376
G +Q +G F ++ ++ + +VDL G+ G L+EA V +M K +
Sbjct: 272 QTGTLQLAKGIHAFAYRRD---LSSDVFVSNSLVDLYGKCGNLEEA-SSVFKMASKKSLT 327
Query: 377 VWGCLMGACETYGNVEMGEYVAKHLQAL 404
W ++ +G E V + + L
Sbjct: 328 AWNSMINCFALHGRSEEAIAVFEEMMKL 355
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 255 bits (652), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 137/355 (38%), Positives = 203/355 (57%), Gaps = 2/355 (0%)
Query: 93 LMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSG 152
L+ +G+ + T ++L+ Q GK++H+ +G NEY + + LY SG
Sbjct: 98 LLWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSG 157
Query: 153 EFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTS 212
+ +A ++F L WNA+I G Q GL ++ + ++ +MR++ PD T S+
Sbjct: 158 DLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFR 217
Query: 213 ACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNV 272
AC ++ L+ G + H + K +++I++ ++LVDMY KC ++VF + RNV
Sbjct: 218 ACSALDRLEHGKRAHAVM--IKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNV 275
Query: 273 SSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDM 332
+WTSLI GY HG V+E L+CF M+E G RPN VTF+ VL+AC HGG V +G +F
Sbjct: 276 ITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYS 335
Query: 333 MKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVE 392
MK YGI P QHY MVD LGRAG L EA + V + P K + VWG L+GAC +GNV+
Sbjct: 336 MKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVK 395
Query: 393 MGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
+ E A L+P N G YVV +N YA+ G+ + ++R M+ + K P YS
Sbjct: 396 LLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYS 450
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 116/250 (46%), Gaps = 4/250 (1%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN +I Y + + L ++ M + ++PD+YT V +A +E GK+ H++ +
Sbjct: 177 WNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMI 236
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
K +++N ++ +++Y K F+ VFD+ + +W ++I G G + ++
Sbjct: 237 KRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLK 296
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDM 250
F M+ G P+ VT + + +AC G + G + + E + + ++VD
Sbjct: 297 CFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIE-PEGQHYAAMVDT 355
Query: 251 YGKCGRMDLAYK-VFATMDERNVSSWTSLIVGYAMHGHVN--EALECFWCMREAGVRPNY 307
G+ GR+ AY+ V + + + W SL+ +HG+V E + + NY
Sbjct: 356 LGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNY 415
Query: 308 VTFVGVLSAC 317
V F ++C
Sbjct: 416 VVFANGYASC 425
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 255 bits (651), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 142/410 (34%), Positives = 220/410 (53%), Gaps = 34/410 (8%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WN++I + + +P AL L M V T+ VL A + +E G+QV S
Sbjct: 199 SWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYI 258
Query: 130 VKIGLQTNEYCETGFINLYCKSG-------------------------------EFTSAR 158
+ + N +++Y K G ++ +AR
Sbjct: 259 EENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAR 318
Query: 159 MVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMR-RHGFAPDGVTMVSLTSACGSV 217
V + P + +WNA+I Q G +A+ VF ++ + + +T+VS SAC V
Sbjct: 319 EVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQV 378
Query: 218 GDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTS 277
G L+LG +H+ Y K R + + ++L+ MY KCG ++ + +VF ++++R+V W++
Sbjct: 379 GALELGRWIHS--YIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSA 436
Query: 278 LIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVY 337
+I G AMHG NEA++ F+ M+EA V+PN VTF V AC H G V E F M++ Y
Sbjct: 437 MIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNY 496
Query: 338 GITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYV 397
GI P +HY C+VD+LGR+G L++A+K +E MP+ P++ VWG L+GAC+ + N+ + E
Sbjct: 497 GIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMA 556
Query: 398 AKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
L LEP NDGA+V+LSNIYA G W+ V +R M+ L K P S
Sbjct: 557 CTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCS 606
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 187/425 (44%), Gaps = 67/425 (15%)
Query: 28 SANNPVTLIATQLCNCTHIHQLNQVYAHILRT---------------------------- 59
+ NN + + + C + QL Q + H++RT
Sbjct: 25 TTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYAR 84
Query: 60 HFLESNPAP--FNWNNIIRCYTRLEAPRNALRLHVLML-RAGVLPDRYTLPIVLKAVCQS 116
+ P P F WN +IR Y P ++ + M+ + P++YT P ++KA +
Sbjct: 85 KVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEV 144
Query: 117 FAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVI 176
++ LG+ +H + VK + ++ + I+ Y G+ SA VF + + SWN++I
Sbjct: 145 SSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMI 204
Query: 177 GGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAA 236
G Q G A+ +F M VTMV + SAC + +L+ G Q+ C Y +
Sbjct: 205 NGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQV--CSYIEENR 262
Query: 237 ERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAM------------ 284
++ + N+++DMY KCG ++ A ++F M+E++ +WT+++ GYA+
Sbjct: 263 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN 322
Query: 285 -------------------HGHVNEALECFWCMR-EAGVRPNYVTFVGVLSACVHGGKVQ 324
+G NEAL F ++ + ++ N +T V LSAC G ++
Sbjct: 323 SMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALE 382
Query: 325 EGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGA 384
GR +K +GI ++ + + G L+++ ++ + K + VW ++G
Sbjct: 383 LGRWIHSYIKK-HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGG 440
Query: 385 CETYG 389
+G
Sbjct: 441 LAMHG 445
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 254 bits (650), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 129/378 (34%), Positives = 209/378 (55%), Gaps = 2/378 (0%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WN +I YTR AL + + M G +T+ VL A + K++H L
Sbjct: 129 SWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLS 188
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
VK + N Y T ++LY K G A VF+ D +W++++ G Q +A+
Sbjct: 189 VKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEAL 248
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
++ +R + T+ S+ AC ++ L G Q+H + K+ +++ + +S VD
Sbjct: 249 LLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVI--CKSGFGSNVFVASSAVD 306
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
MY KCG + +Y +F+ + E+N+ W ++I G+A H E + F M++ G+ PN VT
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366
Query: 310 FVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
F +LS C H G V+EGR +F +M+ YG++P + HY CMVD+LGRAGLL EA ++++ +
Sbjct: 367 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 426
Query: 370 PMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVE 429
P P + +WG L+ +C Y N+E+ E A+ L LEP N G +V+LSNIYA W+E+
Sbjct: 427 PFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIA 486
Query: 430 RIRSSMKEGRLAKVPAYS 447
+ R +++ + KV S
Sbjct: 487 KSRKLLRDCDVKKVRGKS 504
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 177/422 (41%), Gaps = 59/422 (13%)
Query: 65 NPAPFNWNNIIRCYTRLEAPR----NALRLHVLML----RAGVLPDRYTLPI-------- 108
N F N +IRC PR ++L ++ +L + V P RY+
Sbjct: 10 NILGFTVNFLIRCKV---LPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHE 66
Query: 109 VLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPK 168
+L+ ++ A+ K H ++I L+ + IN Y K G AR VFD +
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 169 LGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHT 228
L SWN +IG ++ + +A+ +F+ MR GF T+ S+ SACG D +LH
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLH- 185
Query: 229 CVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHV 288
C+ K ++ + +L+D+Y KCG + A +VF +M +++ +W+S++ GY + +
Sbjct: 186 CL-SVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNY 244
Query: 289 NEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGR------CYFDMMKNVYGITPR 342
EAL + + + N T V+ AC + + EG+ C NV+ +
Sbjct: 245 EEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSA 304
Query: 343 LQHYG------------------------CMVDLLGRAGLLDEAMKMVEEMP---MKPNS 375
+ Y ++ + E M + E+M M PN
Sbjct: 305 VDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNE 364
Query: 376 IVWGCLMGACETYGNVEMGEYVAKHLQA---LEPWNDGAYVVLSNIYANKGMWKEV-ERI 431
+ + L+ C G VE G K ++ L P N Y + +I G+ E E I
Sbjct: 365 VTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSP-NVVHYSCMVDILGRAGLLSEAYELI 423
Query: 432 RS 433
+S
Sbjct: 424 KS 425
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 254 bits (649), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 148/483 (30%), Positives = 236/483 (48%), Gaps = 62/483 (12%)
Query: 33 VTLIATQLCNCTHIHQLNQVYAHILRTHFLES------------------NP-------- 66
V+ + ++L +C +++Q+ Q++ H+LR +S +P
Sbjct: 49 VSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEP 108
Query: 67 ----APFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELG 122
PF W +IR Y A+ ++ M + + P +T +LKA + LG
Sbjct: 109 VQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLG 168
Query: 123 KQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWN--------- 173
+Q H+ ++ Y I++Y K AR VFDE P+ + SW
Sbjct: 169 RQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARV 228
Query: 174 ----------------------AVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLT 211
A++ G +Q ++A+ F M + G D VT+
Sbjct: 229 GNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYI 288
Query: 212 SACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERN 271
SAC +G + + + + +++ ++L+DMY KCG ++ A VF +M+ +N
Sbjct: 289 SACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKN 348
Query: 272 VSSWTSLIVGYAMHGHVNEALECF-WCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYF 330
V +++S+I+G A HG EAL F + + + ++PN VTFVG L AC H G V +GR F
Sbjct: 349 VFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVF 408
Query: 331 DMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGN 390
D M +G+ P HY CMVDLLGR G L EA+++++ M ++P+ VWG L+GAC + N
Sbjct: 409 DSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNN 468
Query: 391 VEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYSLTT 450
E+ E A+HL LEP G Y++LSN+YA+ G W V R+R +KE L K PA S
Sbjct: 469 PEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVV 528
Query: 451 NSD 453
+ +
Sbjct: 529 DKN 531
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 253 bits (647), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/368 (35%), Positives = 209/368 (56%), Gaps = 5/368 (1%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
W +I +T L L+++ ML Y + I ++A ++ GKQ+H+ +
Sbjct: 181 WTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVI 240
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
K G Q+N ++LYC+ G + A+ F E D L +WN +I L + + +A+
Sbjct: 241 KRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSD-SSEALL 299
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDM 250
+F GF P+ T SL +AC ++ L G QLH ++ + ++ + N+L+DM
Sbjct: 300 MFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIF--RRGFNKNVELANALIDM 357
Query: 251 YGKCGRMDLAYKVFATM-DERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
Y KCG + + +VF + D RN+ SWTS+++GY HG+ EA+E F M +G+RP+ +
Sbjct: 358 YAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIV 417
Query: 310 FVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
F+ VLSAC H G V++G YF++M++ YGI P Y C+VDLLGRAG + EA ++VE M
Sbjct: 418 FMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERM 477
Query: 370 PMKPNSIVWGCLMGACETYG-NVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEV 428
P KP+ WG ++GAC+ + N + A+ + L+P G YV+LS IYA +G W +
Sbjct: 478 PFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDF 537
Query: 429 ERIRSSMK 436
R+R M+
Sbjct: 538 ARVRKMMR 545
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 142/325 (43%), Gaps = 15/325 (4%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
W +I Y A M++ G P+ +TL VLK+ + G VH + V
Sbjct: 79 WTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVV 138
Query: 131 KIGLQTNEYCETGFINLYCK-SGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
K+G++ + Y + +N+Y S +A ++F + +W +I G + G +
Sbjct: 139 KLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGL 198
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
+++ M + A S+ + G Q+H V K ++++ + NS++D
Sbjct: 199 KMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASV--IKRGFQSNLPVMNSILD 256
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
+Y +CG + A F M+++++ +W +LI +EAL F G PN T
Sbjct: 257 LYCRCGYLSEAKHYFHEMEDKDLITWNTLISELE-RSDSSEALLMFQRFESQGFVPNCYT 315
Query: 310 FVGVLSAC-----VHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMK 364
F +++AC ++ G+ GR + G ++ ++D+ + G + ++ +
Sbjct: 316 FTSLVAACANIAALNCGQQLHGRIFRR------GFNKNVELANALIDMYAKCGNIPDSQR 369
Query: 365 MVEEMPMKPNSIVWGCLMGACETYG 389
+ E+ + N + W +M ++G
Sbjct: 370 VFGEIVDRRNLVSWTSMMIGYGSHG 394
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 111/255 (43%), Gaps = 11/255 (4%)
Query: 142 TGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFA 201
T I Y + G AR +FDE PD + +W A+I G + A F M + G +
Sbjct: 49 TNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTS 108
Query: 202 PDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCG-RMDLA 260
P+ T+ S+ +C ++ L G +H V K + + N++++MY C M+ A
Sbjct: 109 PNEFTLSSVLKSCRNMKVLAYGALVHGVV--VKLGMEGSLYVDNAMMNMYATCSVTMEAA 166
Query: 261 YKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCM--REAGVRPNYVTFVGVLSACV 318
+F + +N +WT+LI G+ G L+ + M A V P +T SA +
Sbjct: 167 CLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASI 226
Query: 319 HGGKVQEGR-CYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIV 377
V G+ + ++K G L ++DL R G L EA EM K + I
Sbjct: 227 DS--VTTGKQIHASVIKR--GFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDK-DLIT 281
Query: 378 WGCLMGACETYGNVE 392
W L+ E + E
Sbjct: 282 WNTLISELERSDSSE 296
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 16/135 (11%)
Query: 231 YHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNE 290
Y ++ IL N +V + K G ++ A +F M +R+V +WT++I GYA +
Sbjct: 36 YPPYKPKKHHILATNLIVSYFEK-GLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNAR 94
Query: 291 ALECFWCMREAGVRPNYVTFVGVLSAC-----------VHGGKVQ---EGRCYFD-MMKN 335
A ECF M + G PN T VL +C VHG V+ EG Y D M N
Sbjct: 95 AWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMN 154
Query: 336 VYGITPRLQHYGCMV 350
+Y C++
Sbjct: 155 MYATCSVTMEAACLI 169
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 210/384 (54%), Gaps = 5/384 (1%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQ 124
P +N +I YT +L L ++ +G R ++ V S + L
Sbjct: 284 KPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGA---RLRSSTLVSLVPVSGHLMLIYA 340
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGL 184
+H +K ++ T +Y K E SAR +FDE+P+ L SWNA+I G +Q GL
Sbjct: 341 IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGL 400
Query: 185 ARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMW 244
DAI +F M++ F+P+ VT+ + SAC +G L LG +H V + I +
Sbjct: 401 TEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDF--ESSIYVS 458
Query: 245 NSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVR 304
+L+ MY KCG + A ++F M ++N +W ++I GY +HG EAL F+ M +G+
Sbjct: 459 TALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGIT 518
Query: 305 PNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMK 364
P VTF+ VL AC H G V+EG F+ M + YG P ++HY CMVD+LGRAG L A++
Sbjct: 519 PTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQ 578
Query: 365 MVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGM 424
+E M ++P S VW L+GAC + + + V++ L L+P N G +V+LSNI++
Sbjct: 579 FIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRN 638
Query: 425 WKEVERIRSSMKEGRLAKVPAYSL 448
+ + +R + K+ +LAK P Y+L
Sbjct: 639 YPQAATVRQTAKKRKLAKAPGYTL 662
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 152/321 (47%), Gaps = 8/321 (2%)
Query: 71 WNNIIRCYTRLEAPRNALRL-HVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
WN +I Y + E ++++ L+ + D TL +L AV + + LG Q+HSL
Sbjct: 188 WNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLA 247
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
K G +++Y TGFI+LY K G+ +F E P + ++NA+I G + G ++
Sbjct: 248 TKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSL 307
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
+F + G T+VSL G L L +H Y K+ + + +L
Sbjct: 308 SLFKELMLSGARLRSSTLVSLVPVS---GHLMLIYAIHG--YCLKSNFLSHASVSTALTT 362
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
+Y K ++ A K+F E+++ SW ++I GY +G +A+ F M+++ PN VT
Sbjct: 363 VYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVT 422
Query: 310 FVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
+LSAC G + G+ D++++ + ++ + + G + EA ++ + M
Sbjct: 423 ITCILSACAQLGALSLGKWVHDLVRST-DFESSIYVSTALIGMYAKCGSIAEARRLFDLM 481
Query: 370 PMKPNSIVWGCLMGACETYGN 390
K N + W ++ +G
Sbjct: 482 -TKKNEVTWNTMISGYGLHGQ 501
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/470 (19%), Positives = 190/470 (40%), Gaps = 58/470 (12%)
Query: 5 FFQLGRRCYSVSQRSITQT-LLLDSANNPVTLIAT---QLCNCTHIHQLNQVYAHILRTH 60
+ +R S+S + T ++L N ++L+ +L + I+ ++ + R
Sbjct: 23 YLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQR-- 80
Query: 61 FLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVL-PDRYTLPIVLKAVCQSFAI 119
P F +N ++R ++ E+P ++L + + ++ L P+ T + A
Sbjct: 81 -----PDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDD 135
Query: 120 ELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGL 179
G+ +H V G + + + +Y K AR VFD P+ WN +I G
Sbjct: 136 RAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGY 195
Query: 180 SQGGLARDAIRVFVNMRRHGFAP-DGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAER 238
+ + ++I+VF ++ D T++ + A + +L+LG+Q+H+
Sbjct: 196 RKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSH 255
Query: 239 TDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCM 298
+L + +Y KCG++ + +F + ++ ++ ++I GY +G +L F +
Sbjct: 256 DYVL--TGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKEL 313
Query: 299 REAGVRPNYVTFVGVLSA--------CVHG------------------------GKVQEG 326
+G R T V ++ +HG +++
Sbjct: 314 MLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESA 373
Query: 327 RCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM---PMKPNSIVWGCLMG 383
R FD L + M+ + GL ++A+ + EM PN + C++
Sbjct: 374 RKLFDESPE-----KSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILS 428
Query: 384 ACETYGNVEMGEYVAKHLQALEPWNDGAYV--VLSNIYANKGMWKEVERI 431
AC G + +G++V +++ + + YV L +YA G E R+
Sbjct: 429 ACAQLGALSLGKWVHDLVRSTD-FESSIYVSTALIGMYAKCGSIAEARRL 477
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/417 (33%), Positives = 212/417 (50%), Gaps = 40/417 (9%)
Query: 64 SNPAPFNWNNIIR-CYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVC--QSFAIE 120
+NP+ F +N IIR C + ++ R V M R V PD +T P V KA ++ +
Sbjct: 75 TNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLT 134
Query: 121 LGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPK------------ 168
L K +H ++ GL ++ + I +Y SA +FDENP
Sbjct: 135 LVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLV 194
Query: 169 -------------------LGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVS 209
L SWN++I G +Q R+AI++F M G PD V +VS
Sbjct: 195 KAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVS 254
Query: 210 LTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDE 269
SAC GD Q G +H Y + D + LVD Y KCG +D A ++F +
Sbjct: 255 TLSACAQSGDWQKGKAIHD--YTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSD 312
Query: 270 RNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCY 329
+ + +W ++I G AMHG+ ++ F M +G++P+ VTF+ VL C H G V E R
Sbjct: 313 KTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNL 372
Query: 330 FDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPM----KPNSIVWGCLMGAC 385
FD M+++Y + ++HYGCM DLLGRAGL++EA +M+E+MP + + W L+G C
Sbjct: 373 FDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGC 432
Query: 386 ETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAK 442
+GN+E+ E A ++AL P + G Y V+ +YAN W+EV ++R + + K
Sbjct: 433 RIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVK 489
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 150/476 (31%), Positives = 249/476 (52%), Gaps = 40/476 (8%)
Query: 8 LGRRCYSVSQRSITQTLLLDSANNPVTLIATQLCNCTHIHQLNQV-YAHILRTHFLESNP 66
L +C S+S+ TLL+ + +Q + + + V YA+ + S+P
Sbjct: 14 LRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKL--SDP 71
Query: 67 APFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVH 126
+ WN +IR ++ P ++ +++ MLR G+LPD T P ++K+ + +LG +H
Sbjct: 72 PNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLH 131
Query: 127 SLGVKIGLQTNEY-CET------------------------------GFINLYCKSGEFT 155
VK GL+ + + C T ++ Y KSG+
Sbjct: 132 CSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVV 191
Query: 156 SARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAP-DGVTMVSLTSAC 214
SAR+VFDE + + +W+++I G + G A+ +F M R G + + VTMVS+ AC
Sbjct: 192 SARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICAC 251
Query: 215 GSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVF--ATMDERNV 272
+G L G +H + +++ SL+DMY KCG + A+ VF A++ E +
Sbjct: 252 AHLGALNRGKTVHRYILDVHLP--LTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDA 309
Query: 273 SSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDM 332
W ++I G A HG + E+L+ F MRE+ + P+ +TF+ +L+AC HGG V+E +F
Sbjct: 310 LMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKS 369
Query: 333 MKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVE 392
+K G P+ +HY CMVD+L RAGL+ +A + EMP+KP + G L+ C +GN+E
Sbjct: 370 LKES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLE 428
Query: 393 MGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYSL 448
+ E V K L L+P NDG YV L+N+YA ++ +R +M++ + K+ +S+
Sbjct: 429 LAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSI 484
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/369 (35%), Positives = 208/369 (56%), Gaps = 9/369 (2%)
Query: 78 YTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTN 137
YT+ R+AL+L V ++ GV D + +VLKA + LGKQ+H+ K+GL++
Sbjct: 260 YTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESE 319
Query: 138 EYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMR- 196
T ++ Y K F SA F E +P SW+A+I G Q +A++ F ++R
Sbjct: 320 VSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRS 379
Query: 197 RHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI---LMWNSLVDMYGK 253
++ + T S+ AC + D +G Q+H A A +R+ I ++L+ MY K
Sbjct: 380 KNASILNSFTYTSIFQACSVLADCNIGGQVH-----ADAIKRSLIGSQYGESALITMYSK 434
Query: 254 CGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGV 313
CG +D A +VF +MD ++ +WT+ I G+A +G+ +EAL F M G++PN VTF+ V
Sbjct: 435 CGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAV 494
Query: 314 LSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKP 373
L+AC H G V++G+ D M Y + P + HY CM+D+ R+GLLDEA+K ++ MP +P
Sbjct: 495 LTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEP 554
Query: 374 NSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRS 433
+++ W C + C T+ N+E+GE + L+ L+P + YV+ N+Y G W+E +
Sbjct: 555 DAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMK 614
Query: 434 SMKEGRLAK 442
M E L K
Sbjct: 615 LMNERMLKK 623
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 204/473 (43%), Gaps = 53/473 (11%)
Query: 5 FFQLGRRCYSVSQRSITQTLLLDSANNPVTLIAT----QLCNCTHIHQLNQVYAHILRTH 60
F+ R S+S + + NP L+ C C + ++++ +
Sbjct: 89 LFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEM---- 144
Query: 61 FLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIE 120
S + +I Y A+ L ML +G P +LK++ A++
Sbjct: 145 ---SELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALD 201
Query: 121 LGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLS 180
G+Q+H+ ++ GL +N ETG +N+Y K G A+ VFD+ K + ++ G +
Sbjct: 202 FGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYT 261
Query: 181 QGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTD 240
Q G ARDA+++FV++ G D + AC S+ +L LG Q+H CV AK ++
Sbjct: 262 QAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACV--AKLGLESE 319
Query: 241 ILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMRE 300
+ + LVD Y KC + A + F + E N SW+++I GY EA++ F +R
Sbjct: 320 VSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRS 379
Query: 301 AGVRP-NYVTFVGVLSACV------HGGKVQEGRCYFDMMKNVYGITPRLQHY---GCMV 350
N T+ + AC GG+V ++ + YG + + Y GC+
Sbjct: 380 KNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLD 439
Query: 351 D-------------------LLGRA--GLLDEAMKMVEEM---PMKPNSIVWGCLMGACE 386
D + G A G EA+++ E+M MKPNS+ + ++ AC
Sbjct: 440 DANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACS 499
Query: 387 TYGNVEMGEYVAKHLQALEPWNDGA----YVVLSNIYANKGMWKEVERIRSSM 435
G VE G++ + L +N Y + +IYA G+ E + +M
Sbjct: 500 HAGLVEQGKHCLDTM--LRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNM 550
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/389 (37%), Positives = 214/389 (55%), Gaps = 12/389 (3%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
W+ I Y + AL + ML +G+ P+ TL VL A+ GK++H
Sbjct: 332 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 391
Query: 130 VK--IGLQTNEYCETG-----FINLYCKSGEFTSARMVFDE-NPDPK-LGSWNAVIGGLS 180
+K I L+ N + + I++Y K + +AR +FD +P + + +W +IGG S
Sbjct: 392 IKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYS 451
Query: 181 QGGLARDAIRVFVNMRRHGFA--PDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAER 238
Q G A A+ + M P+ T+ AC S+ L++G Q+H +
Sbjct: 452 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQ-NA 510
Query: 239 TDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCM 298
+ + N L+DMY KCG + A VF M +N +WTSL+ GY MHG+ EAL F M
Sbjct: 511 VPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEM 570
Query: 299 REAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGL 358
R G + + VT + VL AC H G + +G YF+ MK V+G++P +HY C+VDLLGRAG
Sbjct: 571 RRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGR 630
Query: 359 LDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNI 418
L+ A++++EEMPM+P +VW + C +G VE+GEY A+ + L +DG+Y +LSN+
Sbjct: 631 LNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNL 690
Query: 419 YANKGMWKEVERIRSSMKEGRLAKVPAYS 447
YAN G WK+V RIRS M+ + K P S
Sbjct: 691 YANAGRWKDVTRIRSLMRHKGVKKRPGCS 719
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 192/425 (45%), Gaps = 51/425 (12%)
Query: 11 RCYSVSQRSITQTLLLDSANNPVTLIATQLCNCTHIHQLNQVYAHILRTHFLESNPAPFN 70
+C ++SQ + LL + +TL T T+I +A L F S+ ++
Sbjct: 37 KCKTISQVKLIHQKLL--SFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYH 94
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN++IR Y L L LM PD YT P V KA + ++ G+ H+L +
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSL 154
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
G +N + + +Y + + AR VFDE + SWN++I ++ G + A+
Sbjct: 155 VTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALE 214
Query: 191 VFVNM-RRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
+F M G PD +T+V++ C S+G LG QLH ++ + ++ + N LVD
Sbjct: 215 MFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQ--NMFVGNCLVD 272
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMRE--------- 300
MY KCG MD A VF+ M ++V SW +++ GY+ G +A+ F M+E
Sbjct: 273 MYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVT 332
Query: 301 --------------------------AGVRPNYVTFVGVLSACVHGGKVQEGR---CY-- 329
+G++PN VT + VLS C G + G+ CY
Sbjct: 333 WSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAI 392
Query: 330 ---FDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM-PMKPNSIVWGCLMGAC 385
D+ KN +G + + ++D+ + +D A M + + P + + + W ++G
Sbjct: 393 KYPIDLRKNGHGDENMVINQ--LIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGY 450
Query: 386 ETYGN 390
+G+
Sbjct: 451 SQHGD 455
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 156/359 (43%), Gaps = 48/359 (13%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRA-GVLPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
+WN+II Y +L P+ AL + M G PD TL VL LGKQ+H
Sbjct: 195 SWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCF 254
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
V + N + +++Y K G A VF + SWNA++ G SQ G DA
Sbjct: 255 AVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDA 314
Query: 189 IRVFVNMRRH-----------------------------------GFAPDGVTMVSLTSA 213
+R+F M+ G P+ VT++S+ S
Sbjct: 315 VRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSG 374
Query: 214 CGSVGDLQLGLQLHTCVYH-----AKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMD 268
C SVG L G ++H K + ++ N L+DMY KC ++D A +F ++
Sbjct: 375 CASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLS 434
Query: 269 --ERNVSSWTSLIVGYAMHGHVNEALECFWCMREAG--VRPNYVTFVGVLSACVHGGKVQ 324
ER+V +WT +I GY+ HG N+ALE M E RPN T L AC ++
Sbjct: 435 PKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALR 494
Query: 325 EGR-CYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLM 382
G+ + ++N P L C++D+ + G + +A + + M M N + W LM
Sbjct: 495 IGKQIHAYALRNQQNAVP-LFVSNCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLM 551
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 139/325 (42%), Gaps = 28/325 (8%)
Query: 80 RLEAPRNALRLHVLM---LRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQT 136
RL P A + H + L + P+ T P + K C++ I K +H + G+ T
Sbjct: 4 RLLIPNAAAKSHQYIKVSLFSTSAPE-ITPPFIHK--CKT--ISQVKLIHQKLLSFGILT 58
Query: 137 NEYCETGFINLYCKSGEFTSARMVFDENPDPKLG--SWNAVIGGLSQGGLARDAIRVFVN 194
+ I+ Y G + A + P G WN++I G A + +F
Sbjct: 59 LNL-TSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGL 117
Query: 195 MRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKC 254
M + PD T + ACG + ++ G H +++ + N+LV MY +C
Sbjct: 118 MHSLSWTPDNYTFPFVFKACGEISSVRCGESAHA--LSLVTGFISNVFVGNALVAMYSRC 175
Query: 255 GRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCM-REAGVRPNYVTFVGV 313
+ A KVF M +V SW S+I YA G ALE F M E G RP+ +T V V
Sbjct: 176 RSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNV 235
Query: 314 LSACVHGGKVQEGR---CYF---DMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVE 367
L C G G+ C+ +M++N++ C+VD+ + G++DEA +
Sbjct: 236 LPPCASLGTHSLGKQLHCFAVTSEMIQNMFV-------GNCLVDMYAKCGMMDEANTVFS 288
Query: 368 EMPMKPNSIVWGCLMGACETYGNVE 392
M +K + + W ++ G E
Sbjct: 289 NMSVK-DVVSWNAMVAGYSQIGRFE 312
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/386 (36%), Positives = 216/386 (55%), Gaps = 11/386 (2%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
W ++I + +A+ M GV + + +L A + I GK H
Sbjct: 176 WGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQ 235
Query: 131 KIGLQTNEYCETGF--------INLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQG 182
+G + GF I++Y K G+ +AR +FD P+ L SWN++I G SQ
Sbjct: 236 GLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQN 295
Query: 183 GLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDIL 242
G A +A+ +F++M G APD VT +S+ A G QLG +H Y +K D
Sbjct: 296 GDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHA--YVSKTGFVKDAA 353
Query: 243 MWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAG 302
+ +LV+MY K G + A K F +++++ +WT +I+G A HGH NEAL F M+E G
Sbjct: 354 IVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKG 413
Query: 303 -VRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDE 361
P+ +T++GVL AC H G V+EG+ YF M++++G+ P ++HYGCMVD+L RAG +E
Sbjct: 414 NATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEE 473
Query: 362 AMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYAN 421
A ++V+ MP+KPN +WG L+ C+ + N+E+ + + + E G YV+LSNIYA
Sbjct: 474 AERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAK 533
Query: 422 KGMWKEVERIRSSMKEGRLAKVPAYS 447
G W +V+ IR SMK R+ KV +S
Sbjct: 534 AGRWADVKLIRESMKSKRVDKVLGHS 559
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 126/475 (26%), Positives = 203/475 (42%), Gaps = 77/475 (16%)
Query: 36 IATQLCNCTHIHQLNQVYAHILRTHFLESN------------------------------ 65
I +QL NC + +LNQ++ ++++ + +
Sbjct: 9 ILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESID 68
Query: 66 -PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQ 124
P+ + WN++IR Y+ P AL + MLR G PD +T P VLKA I+ G
Sbjct: 69 CPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSC 128
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGL 184
VH VK G + N Y T +++Y GE VF++ P + +W ++I G
Sbjct: 129 VHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNR 188
Query: 185 ARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVY------HAKAAER 238
DAI F M+ +G + MV L ACG D+ G H + + ++
Sbjct: 189 FSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVG 248
Query: 239 TDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCM 298
++++ SL+DMY KCG + A +F M ER + SW S+I GY+ +G EAL F M
Sbjct: 249 FNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDM 308
Query: 299 REAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGL 358
+ G+ P+ VTF+ V+ A + G Q G+ + G +V++ + G
Sbjct: 309 LDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKT-GFVKDAAIVCALVNMYAKTGD 367
Query: 359 LDEAMKMVEEMPMK-----------------------------------PNSIVWGCLMG 383
+ A K E++ K P+ I + ++
Sbjct: 368 AESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLY 427
Query: 384 ACETYGNVEMGE-YVA--KHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSM 435
AC G VE G+ Y A + L LEP + Y + +I + G ++E ER+ +M
Sbjct: 428 ACSHIGLVEEGQRYFAEMRDLHGLEPTVE-HYGCMVDILSRAGRFEEAERLVKTM 481
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 143/383 (37%), Positives = 202/383 (52%), Gaps = 6/383 (1%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
W +I YT NAL L LM GV P+ T+ ++ + + GK +H
Sbjct: 285 ITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGW 344
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
V+ + ++ ET I++Y K VF G W+A+I G Q L DA
Sbjct: 345 AVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDA 404
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
+ +F MRR P+ T+ SL A ++ DL+ + +H Y K + + LV
Sbjct: 405 LGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIH--CYLTKTGFMSSLDAATGLV 462
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSS----WTSLIVGYAMHGHVNEALECFWCMREAGVR 304
+Y KCG ++ A+K+F + E++ S W +LI GY MHG + AL+ F M +GV
Sbjct: 463 HVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVT 522
Query: 305 PNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMK 364
PN +TF L+AC H G V+EG F M Y R HY C+VDLLGRAG LDEA
Sbjct: 523 PNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYN 582
Query: 365 MVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGM 424
++ +P +P S VWG L+ AC T+ NV++GE A L LEP N G YV+L+NIYA G
Sbjct: 583 LITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGR 642
Query: 425 WKEVERIRSSMKEGRLAKVPAYS 447
WK++E++RS M+ L K P +S
Sbjct: 643 WKDMEKVRSMMENVGLRKKPGHS 665
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 150/288 (52%), Gaps = 11/288 (3%)
Query: 43 CTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGV--L 100
C HI +++ + ++ L ++N +IR Y R +A+ + + M+ GV +
Sbjct: 62 CGHITYARKLFEEMPQSSLL-------SYNIVIRMYVREGLYHDAISVFIRMVSEGVKCV 114
Query: 101 PDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMV 160
PD YT P V KA + +++LG VH ++ ++Y + + +Y G+ AR V
Sbjct: 115 PDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDV 174
Query: 161 FDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDL 220
FD + + SWN +I G + G DA+ +F M D T+VS+ CG + DL
Sbjct: 175 FDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDL 234
Query: 221 QLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIV 280
++G +H V + ++ ++ N+LV+MY KCGRMD A VF M+ R+V +WT +I
Sbjct: 235 EMGRNVHKLVEEKRLGDKIEVK--NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMIN 292
Query: 281 GYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRC 328
GY G V ALE M+ GVRPN VT ++S C KV +G+C
Sbjct: 293 GYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKC 340
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 149/332 (44%), Gaps = 12/332 (3%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQ 124
N +WN +I Y R +AL + M+ V D T+ +L +E+G+
Sbjct: 180 NRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRN 239
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGL 184
VH L + L + +N+Y K G AR VFD + +W +I G ++ G
Sbjct: 240 VHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGD 299
Query: 185 ARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMW 244
+A+ + M+ G P+ VT+ SL S CG + G LH + + +DI++
Sbjct: 300 VENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHG--WAVRQQVYSDIIIE 357
Query: 245 NSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVR 304
SL+ MY KC R+DL ++VF+ + + W+++I G + V++AL F MR V
Sbjct: 358 TSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVE 417
Query: 305 PNYVTFVGVLSACVHGGKVQEG---RCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDE 361
PN T +L A +++ CY G L +V + + G L+
Sbjct: 418 PNIATLNSLLPAYAALADLRQAMNIHCYLTKT----GFMSSLDAATGLVHVYSKCGTLES 473
Query: 362 AMKM---VEEMPMKPNSIVWGCLMGACETYGN 390
A K+ ++E + ++WG L+ +G+
Sbjct: 474 AHKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 125/247 (50%), Gaps = 6/247 (2%)
Query: 148 YCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGF--APDGV 205
Y G T AR +F+E P L S+N VI + GL DAI VF+ M G PDG
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGY 118
Query: 206 TMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFA 265
T + A G + ++LGL +H + + D + N+L+ MY G++++A VF
Sbjct: 119 TYPFVAKAAGELKSMKLGLVVHGRILRSWFGR--DKYVQNALLAMYMNFGKVEMARDVFD 176
Query: 266 TMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQE 325
M R+V SW ++I GY +G++N+AL F M V ++ T V +L C H ++
Sbjct: 177 VMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEM 236
Query: 326 GRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGAC 385
GR +++ + +++ +V++ + G +DEA + + M + + I W C++
Sbjct: 237 GRNVHKLVEE-KRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME-RRDVITWTCMINGY 294
Query: 386 ETYGNVE 392
G+VE
Sbjct: 295 TEDGDVE 301
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 252 bits (643), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 140/415 (33%), Positives = 225/415 (54%), Gaps = 37/415 (8%)
Query: 64 SNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGK 123
SNP + + +I + + + L+ M+ VLPD Y + VLKA C +++ +
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKA-CD---LKVCR 143
Query: 124 QVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPD----------------- 166
++H+ +K+G ++ + +Y KSGE +A+ +FDE PD
Sbjct: 144 EIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECG 203
Query: 167 --------------PKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTS 212
W A+I GL + A+ +F M+ + + T V + S
Sbjct: 204 FIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLS 263
Query: 213 ACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNV 272
AC +G L+LG +H+ V + + + N+L++MY +CG ++ A +VF M +++V
Sbjct: 264 ACSDLGALELGRWVHSFVENQRMELSN--FVGNALINMYSRCGDINEARRVFRVMRDKDV 321
Query: 273 SSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDM 332
S+ ++I G AMHG EA+ F M G RPN VT V +L+AC HGG + G F+
Sbjct: 322 ISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNS 381
Query: 333 MKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVE 392
MK V+ + P+++HYGC+VDLLGR G L+EA + +E +P++P+ I+ G L+ AC+ +GN+E
Sbjct: 382 MKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNME 441
Query: 393 MGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
+GE +AK L E + G YV+LSN+YA+ G WKE IR SM++ + K P S
Sbjct: 442 LGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCS 496
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 110/258 (42%), Gaps = 42/258 (16%)
Query: 160 VFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGD 219
VF +P + + A+I G G + D + ++ M + PD + S+ AC D
Sbjct: 83 VFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----D 138
Query: 220 LQLGLQLHTCVY-----------------HAKAAE------------RTDILMWNSLVDM 250
L++ ++H V + K+ E D + +++
Sbjct: 139 LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINC 198
Query: 251 YGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTF 310
Y +CG + A ++F + ++ WT++I G + +N+ALE F M+ V N T
Sbjct: 199 YSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTA 258
Query: 311 VGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHY--GCMVDLLGRAGLLDEAMKMVEE 368
V VLSAC G ++ GR ++N L ++ ++++ R G ++EA ++
Sbjct: 259 VCVLSACSDLGALELGRWVHSFVENQ---RMELSNFVGNALINMYSRCGDINEARRVFRV 315
Query: 369 MPMKP----NSIVWGCLM 382
M K N+++ G M
Sbjct: 316 MRDKDVISYNTMISGLAM 333
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 251 bits (642), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 138/380 (36%), Positives = 211/380 (55%), Gaps = 6/380 (1%)
Query: 71 WNNIIRCYTRLEAP---RNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHS 127
+N +I Y+RL AL + M + P T +L+A ++ L KQ+H
Sbjct: 419 FNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHG 478
Query: 128 LGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARD 187
L K GL + + + I++Y +R+VFDE L WN++ G Q +
Sbjct: 479 LMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEE 538
Query: 188 AIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSL 247
A+ +F+ ++ PD T ++ +A G++ +QLG + H C + E + + N+L
Sbjct: 539 ALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFH-CQLLKRGLE-CNPYITNAL 596
Query: 248 VDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNY 307
+DMY KCG + A+K F + R+V W S+I YA HG +AL+ M G+ PNY
Sbjct: 597 LDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNY 656
Query: 308 VTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVE 367
+TFVGVLSAC H G V++G F++M +GI P +HY CMV LLGRAG L++A +++E
Sbjct: 657 ITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIE 715
Query: 368 EMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKE 427
+MP KP +IVW L+ C GNVE+ E+ A+ +P + G++ +LSNIYA+KGMW E
Sbjct: 716 KMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTE 775
Query: 428 VERIRSSMKEGRLAKVPAYS 447
+++R MK + K P S
Sbjct: 776 AKKVRERMKVEGVVKEPGRS 795
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 171/365 (46%), Gaps = 10/365 (2%)
Query: 22 QTLLLDSANNPVTLIATQLCNCTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRL 81
Q+ L+ S + + T L + ++ N YA ++ E + W +I ++
Sbjct: 171 QSFLVKSGFDRDVYVGTLLIDF-YLKDGNIDYARLVFDALPEKSTV--TWTTMISGCVKM 227
Query: 82 EAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCE 141
+L+L ++ V+PD Y L VL A +E GKQ+H+ ++ GL+ +
Sbjct: 228 GRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLM 287
Query: 142 TGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFA 201
I+ Y K G +A +F+ P+ + SW ++ G Q L ++A+ +F +M + G
Sbjct: 288 NVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLK 347
Query: 202 PDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAY 261
PD S+ ++C S+ L G Q+H Y KA D + NSL+DMY KC + A
Sbjct: 348 PDMYACSSILTSCASLHALGFGTQVHA--YTIKANLGNDSYVTNSLIDMYAKCDCLTDAR 405
Query: 262 KVFATMDERNVSSWTSLIVGYAMHG---HVNEALECFWCMREAGVRPNYVTFVGVLSACV 318
KVF +V + ++I GY+ G ++EAL F MR +RP+ +TFV +L A
Sbjct: 406 KVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASA 465
Query: 319 HGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVW 378
+ + +M YG+ + ++D+ L ++ + +EM +K + ++W
Sbjct: 466 SLTSLGLSKQIHGLMFK-YGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIW 523
Query: 379 GCLMG 383
+
Sbjct: 524 NSMFA 528
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 156/345 (45%), Gaps = 15/345 (4%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQ 124
N +W ++ Y + + A+ L M + G+ PD Y +L + A+ G Q
Sbjct: 312 NKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQ 371
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGL 184
VH+ +K L + Y I++Y K T AR VFD + +NA+I G S+ G
Sbjct: 372 VHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGT 431
Query: 185 A---RDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI 241
+A+ +F +MR P +T VSL A S+ L L Q+H ++ K DI
Sbjct: 432 QWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMF--KYGLNLDI 489
Query: 242 LMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREA 301
++L+D+Y C + + VF M +++ W S+ GY EAL F ++ +
Sbjct: 490 FAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLS 549
Query: 302 GVRPNYVTFVGVLSACVHGGKVQEGRCYF-DMMKNVYGITPRLQHYGCMVDLLGRAGLLD 360
RP+ TF +++A + VQ G+ + ++K P + + ++D+ + G +
Sbjct: 550 RERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN--ALLDMYAKCGSPE 607
Query: 361 EAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALE 405
+A K + + + + W ++ + +G + K LQ LE
Sbjct: 608 DAHKAFDSAASR-DVVCWNSVISSYANHGEGK------KALQMLE 645
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 2/194 (1%)
Query: 124 QVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGG 183
Q+ S VK G + Y T I+ Y K G AR+VFD P+ +W +I G + G
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228
Query: 184 LARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILM 243
+ ++++F + PDG + ++ SAC + L+ G Q+H + + D +
Sbjct: 229 RSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHIL--RYGLEMDASL 286
Query: 244 WNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGV 303
N L+D Y KCGR+ A+K+F M +N+ SWT+L+ GY + EA+E F M + G+
Sbjct: 287 MNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGL 346
Query: 304 RPNYVTFVGVLSAC 317
+P+ +L++C
Sbjct: 347 KPDMYACSSILTSC 360
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 121/265 (45%), Gaps = 13/265 (4%)
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGL 184
VH + GL+ + Y INLY ++G AR VF++ P+ L SW+ ++ + G+
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 185 ARDAIRVFVNM-RRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILM 243
+++ VF+ R +P+ + S AC + + + K+ D+ +
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 244 WNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGV 303
L+D Y K G +D A VF + E++ +WT++I G G +L+ F+ + E V
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245
Query: 304 RPNYVTFVGVLSAC-----VHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGL 358
P+ VLSAC + GGK + + +++ YG+ ++D + G
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGK----QIHAHILR--YGLEMDASLMNVLIDSYVKCGR 299
Query: 359 LDEAMKMVEEMPMKPNSIVWGCLMG 383
+ A K+ MP K N I W L+
Sbjct: 300 VIAAHKLFNGMPNK-NIISWTTLLS 323
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 251 bits (642), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 148/389 (38%), Positives = 214/389 (55%), Gaps = 7/389 (1%)
Query: 70 NWNNIIRCYTRLE-APRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
+WN+II R E + A+ + RAG +R T VL AV ELGKQ+H L
Sbjct: 483 SWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGL 542
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLG-SWNAVIGGLSQGGLARD 187
+K + E I Y K GE +F + + +WN++I G L
Sbjct: 543 ALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAK 602
Query: 188 AIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSL 247
A+ + M + G D ++ SA SV L+ G+++H C +A +D+++ ++L
Sbjct: 603 ALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHAC--SVRACLESDVVVGSAL 660
Query: 248 VDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAG-VRPN 306
VDMY KCGR+D A + F TM RN SW S+I GYA HG EAL+ F M+ G P+
Sbjct: 661 VDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPD 720
Query: 307 YVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMV 366
+VTFVGVLSAC H G ++EG +F+ M + YG+ PR++H+ CM D+LGRAG LD+ +
Sbjct: 721 HVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFI 780
Query: 367 EEMPMKPNSIVWGCLMGAC--ETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGM 424
E+MPMKPN ++W ++GAC E+G+ A+ L LEP N YV+L N+YA G
Sbjct: 781 EKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGR 840
Query: 425 WKEVERIRSSMKEGRLAKVPAYSLTTNSD 453
W+++ + R MK+ + K YS T D
Sbjct: 841 WEDLVKARKKMKDADVKKEAGYSWVTMKD 869
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 161/345 (46%), Gaps = 14/345 (4%)
Query: 54 AHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAV 113
A R + ++ +WN++I + A+ + M R +LP +TL L +
Sbjct: 366 ADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSC 425
Query: 114 CQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWN 173
+LG+Q+H +K+G+ N + LY ++G R +F P+ SWN
Sbjct: 426 ASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWN 485
Query: 174 AVIGGLSQGGLA-RDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYH 232
++IG L++ + +A+ F+N +R G + +T S+ SA S+ +LG Q+H
Sbjct: 486 SIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALK 545
Query: 233 AKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVS-SWTSLIVGYAMHGHVNEA 291
A+ + N+L+ YGKCG MD K+F+ M ER + +W S+I GY + + +A
Sbjct: 546 NNIAD--EATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKA 603
Query: 292 LECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHY----G 347
L+ W M + G R + + VLSA ++ G M + + L+
Sbjct: 604 LDLVWFMLQTGQRLDSFMYATVLSAFASVATLERG-----MEVHACSVRACLESDVVVGS 658
Query: 348 CMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVE 392
+VD+ + G LD A++ MP++ NS W ++ +G E
Sbjct: 659 ALVDMYSKCGRLDYALRFFNTMPVR-NSYSWNSMISGYARHGQGE 702
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 127/284 (44%), Gaps = 27/284 (9%)
Query: 112 AVCQSFAIELGKQVHSLGVKIGLQTNEY-CETGFINLYCKSGEFTSARMVFDENPDPKLG 170
++ + ++ G++VH + GL G +N+Y K G AR VF D
Sbjct: 322 SLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSV 381
Query: 171 SWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCV 230
SWN++I GL Q G +A+ + +MRRH P T++S S+C S+ +LG Q+H
Sbjct: 382 SWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHG-- 439
Query: 231 YHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGH-VN 289
K ++ + N+L+ +Y + G ++ K+F++M E + SW S+I A +
Sbjct: 440 ESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLP 499
Query: 290 EALECFWCMREAGVRPNYVTF-----------VGVLSACVHGGKVQEGRCYFDMMKNVYG 338
EA+ CF + AG + N +TF G L +HG ++
Sbjct: 500 EAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKN------------N 547
Query: 339 ITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLM 382
I ++ G+ G +D K+ M + +++ W ++
Sbjct: 548 IADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMI 591
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 146/334 (43%), Gaps = 24/334 (7%)
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLA 185
HS K L + Y IN Y ++G+ SAR VFDE P SW ++ G S+ G
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 186 RDAIRVFVNMRRHGFAPDGVTMVSLTSAC---GSVGDLQLGLQLHTCVYHAKAAERTDIL 242
++A+ +M + G + VS+ AC GSVG L G Q+H ++ K + D +
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGIL-FGRQIHGLMF--KLSYAVDAV 140
Query: 243 MWNSLVDMYGKC-GRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREA 301
+ N L+ MY KC G + A F ++ +N SW S+I Y+ G A F M+
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200
Query: 302 GVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVY--GITPRLQHYGCMVDLLGRAGLL 359
G RP TF G L + R +M + G+ L +V ++G L
Sbjct: 201 GSRPTEYTF-GSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259
Query: 360 DEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWND---GAYVVLS 416
A K+ +M + + G ++G + GE K + D +YV+L
Sbjct: 260 SYARKVFNQMETRNAVTLNGLMVGLVRQ----KWGEEATKLFMDMNSMIDVSPESYVILL 315
Query: 417 NIYANKGMWKEVERIRSSMKEGRLAKVPAYSLTT 450
+ + + +EV +K+GR +V + +TT
Sbjct: 316 SSFPEYSLAEEV-----GLKKGR--EVHGHVITT 342
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 172/417 (41%), Gaps = 56/417 (13%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQ---SFAIELGKQVH 126
+W I+ Y+R + AL M++ G+ ++Y VL+A CQ S I G+Q+H
Sbjct: 69 SWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRA-CQEIGSVGILFGRQIH 127
Query: 127 SLGVKIGLQTNEYCETGFINLYCKS-GEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLA 185
L K+ + I++Y K G A F + SWN++I SQ G
Sbjct: 128 GLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQ 187
Query: 186 RDAIRVFVNMRRHGFAPDGVTMVSL-TSACG-SVGDLQLGLQLHTCVYHAKAAERTDILM 243
R A R+F +M+ G P T SL T+AC + D++L Q+ + K+ TD+ +
Sbjct: 188 RSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTI--QKSGLLTDLFV 245
Query: 244 WNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMRE-AG 302
+ LV + K G + A KVF M+ RN + L+VG EA + F M
Sbjct: 246 GSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMID 305
Query: 303 VRPNYVTFVGVLSAC----------------VHGGKVQEGRCYF---------------- 330
V P ++V +LS+ VHG + G F
Sbjct: 306 VSPE--SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCG 363
Query: 331 ---DMMKNVYGITPRLQ-HYGCMVDLLGRAGLLDEAMKMVEEM---PMKPNSIVWGCLMG 383
D + Y +T + + M+ L + G EA++ + M + P S +
Sbjct: 364 SIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLS 423
Query: 384 ACETYGNVEMGEYVAKHLQALE---PWNDGAYVVLSNIYANKGMWKEVERIRSSMKE 437
+C + ++G+ + H ++L+ N L +YA G E +I SSM E
Sbjct: 424 SCASLKWAKLGQQI--HGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPE 478
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/419 (35%), Positives = 216/419 (51%), Gaps = 15/419 (3%)
Query: 33 VTLIATQLCNCTHIHQLNQVYAHILRTHFLESNPAPFN----WNNIIRCYTRLEAPRNAL 88
+T + + C C + +V+ E NP +N +I YT +A
Sbjct: 91 LTALISMYCKCGLVADARKVF---------EENPQSSQLSVCYNALISGYTANSKVTDAA 141
Query: 89 RLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLY 148
+ M GV D T+ ++ + LG+ +H VK GL + FI +Y
Sbjct: 142 YMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMY 201
Query: 149 CKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMV 208
K G + R +FDE P L +WNAVI G SQ GLA D + ++ M+ G PD T+V
Sbjct: 202 MKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLV 261
Query: 209 SLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMD 268
S+ S+C +G ++G ++ V ++ + N+ + MY +CG + A VF M
Sbjct: 262 SVLSSCAHLGAKKIGHEVGKLVESNGFV--PNVFVSNASISMYARCGNLAKARAVFDIMP 319
Query: 269 ERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRC 328
+++ SWT++I Y MHG L F M + G+RP+ FV VLSAC H G +G
Sbjct: 320 VKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLE 379
Query: 329 YFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETY 388
F MK Y + P +HY C+VDLLGRAG LDEAM+ +E MP++P+ VWG L+GAC+ +
Sbjct: 380 LFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIH 439
Query: 389 GNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
NV+M E + EP N G YV++SNIY++ + + RIR M+E K P YS
Sbjct: 440 KNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYS 498
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 192/382 (50%), Gaps = 12/382 (3%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIEL-GKQVHSLG 129
WN +R ++ L+ MLR+G PD ++ P +LK+ C S ++ + G+Q+H
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKS-CASLSLPVSGQQLHCHV 79
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGS--WNAVIGGLSQGGLARD 187
K G +T + T I++YCK G AR VF+ENP S +NA+I G + D
Sbjct: 80 TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 188 AIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLH-TCVYHAKAAERTDILMWNS 246
A +F M+ G + D VTM+ L C L LG LH CV K +++ + NS
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCV---KGGLDSEVAVLNS 196
Query: 247 LVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPN 306
+ MY KCG ++ ++F M + + +W ++I GY+ +G + LE + M+ +GV P+
Sbjct: 197 FITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPD 256
Query: 307 YVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMV 366
T V VLS+C H G + G ++++ G P + + + R G L +A +
Sbjct: 257 PFTLVSVLSSCAHLGAKKIGHEVGKLVES-NGFVPNVFVSNASISMYARCGNLAKARAVF 315
Query: 367 EEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGA-YVVLSNIYANKGMW 425
+ MP+K + + W ++G +G E+G + + DGA +V++ + ++ G+
Sbjct: 316 DIMPVK-SLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLT 374
Query: 426 -KEVERIRSSMKEGRLAKVPAY 446
K +E R+ +E +L P +
Sbjct: 375 DKGLELFRAMKREYKLEPGPEH 396
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 148/477 (31%), Positives = 241/477 (50%), Gaps = 67/477 (14%)
Query: 28 SANNPVTLIATQLCNCTHIHQLNQVYAHILRTHFLE-------------SNPA------- 67
S N + LI TQ C+ + +L Q++A +++T + ++P+
Sbjct: 23 SGNTYLRLIDTQ---CSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYL 79
Query: 68 ---------PFNWNNIIRCYTRLEAPRNALRLHVLML--RAGVLPDRYTLPIVLKAVCQS 116
PF WN IIR ++R P A+ + + ML V P R T P V KA +
Sbjct: 80 VFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRL 139
Query: 117 FAIELGKQVHSLGVKIGLQTNEYCETGFINLY---------------------------- 148
G+Q+H + +K GL+ + + +++Y
Sbjct: 140 GQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMI 199
Query: 149 ---CKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGV 205
K G A+ +FDE P SWN++I G + G +DA+ +F M+ PDG
Sbjct: 200 MGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGF 259
Query: 206 TMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFA 265
TMVSL +AC +G + G +H Y + + ++ +L+DMY KCG ++ VF
Sbjct: 260 TMVSLLNACAYLGASEQGRWIHE--YIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFE 317
Query: 266 TMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQE 325
++ +S W S+I+G A +G A++ F + +G+ P+ V+F+GVL+AC H G+V
Sbjct: 318 CAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHR 377
Query: 326 GRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGAC 385
+F +MK Y I P ++HY MV++LG AGLL+EA +++ MP++ ++++W L+ AC
Sbjct: 378 ADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSAC 437
Query: 386 ETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAK 442
GNVEM + AK L+ L+P YV+LSN YA+ G+++E R MKE ++ K
Sbjct: 438 RKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEK 494
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 136/395 (34%), Positives = 217/395 (54%), Gaps = 39/395 (9%)
Query: 86 NALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFI 145
A L+V +L + + P+ +T +LK S + + GK +H+ +K GL + Y TG +
Sbjct: 113 QAFLLYVQLLSSEINPNEFTFSSLLK----SCSTKSGKLIHTHVLKFGLGIDPYVATGLV 168
Query: 146 NLYCKSGEFTSARMVFDENPDPKLGS-------------------------------WNA 174
++Y K G+ SA+ VFD P+ L S WN
Sbjct: 169 DVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNV 228
Query: 175 VIGGLSQGGLARDAIRVFVNMRRHGF-APDGVTMVSLTSACGSVGDLQLGLQLHTCVYHA 233
+I G +Q G DA+ +F + G PD +T+V+ SAC +G L+ G +H V +
Sbjct: 229 MIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSS 288
Query: 234 KAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALE 293
+ R ++ + L+DMY KCG ++ A VF +++ +W ++I GYAMHG+ +AL
Sbjct: 289 RI--RLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALR 346
Query: 294 CFWCMRE-AGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDL 352
F M+ G++P +TF+G L AC H G V EG F+ M YGI P+++HYGC+V L
Sbjct: 347 LFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSL 406
Query: 353 LGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAY 412
LGRAG L A + ++ M M +S++W ++G+C+ +G+ +G+ +A++L L N G Y
Sbjct: 407 LGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIY 466
Query: 413 VVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
V+LSNIYA+ G ++ V ++R+ MKE + K P S
Sbjct: 467 VLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGIS 501
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 134/377 (35%), Positives = 216/377 (57%), Gaps = 5/377 (1%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN++I Y AL L M+ + PD +TL + A + + LGKQ+H +
Sbjct: 373 WNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVI 432
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
+ + ++E+ + I++Y KSG SA VF++ + +WN+++ G SQ G + +AI
Sbjct: 433 RTDV-SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAIS 491
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDM 250
+F M + VT +++ AC S+G L+ G +H + + D+ +L+DM
Sbjct: 492 LFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVH---HKLIISGLKDLFTDTALIDM 548
Query: 251 YGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTF 310
Y KCG ++ A VF M R++ SW+S+I Y MHG + A+ F M E+G +PN V F
Sbjct: 549 YAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVF 608
Query: 311 VGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMP 370
+ VLSAC H G V+EG+ YF++MK+ +G++P +H+ C +DLL R+G L EA + ++EMP
Sbjct: 609 MNVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMP 667
Query: 371 MKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVER 430
++ VWG L+ C + +++ + + L + + G Y +LSNIYA +G W+E R
Sbjct: 668 FLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRR 727
Query: 431 IRSSMKEGRLAKVPAYS 447
+RS+MK L KVP YS
Sbjct: 728 LRSAMKSSNLKKVPGYS 744
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/466 (22%), Positives = 196/466 (42%), Gaps = 80/466 (17%)
Query: 42 NCTHIHQLNQVYAHILRTHFLESNPAP-----------------------------FNWN 72
+C+ + ++Q++AH+L T L +P P F +
Sbjct: 10 SCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYG 69
Query: 73 NIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFA-IELGKQVHSLGVK 131
+I+C A+ L+ ++ ++ P VL+A S + +G +VH +K
Sbjct: 70 VLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIK 129
Query: 132 IGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRV 191
G+ + ET + +Y ++G + A VFD P L +W+ ++ + G A+R+
Sbjct: 130 GGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRM 189
Query: 192 FVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMY 251
F M G PD VTM+S+ C +G L++ +H + + D + NSL+ MY
Sbjct: 190 FKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQI--TRKMFDLDETLCNSLLTMY 247
Query: 252 GKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFV 311
KCG + + ++F + ++N SWT++I Y +AL F M ++G+ PN VT
Sbjct: 248 SKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLY 307
Query: 312 GVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQ--------------------------- 344
VLS+C G ++EG K+V+G R +
Sbjct: 308 SVLSSCGLIGLIREG-------KSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCET 360
Query: 345 -----------HYGCMVDLLGRAGLLDEAMKMVEEM---PMKPNSIVWGCLMGACETYGN 390
+ ++ L G++ +A+ + +M +KP++ + ACE G
Sbjct: 361 VLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGL 420
Query: 391 VEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMK 436
V +G+ + H+ + ++ L ++Y+ G + + +K
Sbjct: 421 VPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIK 466
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 143/310 (46%), Gaps = 14/310 (4%)
Query: 86 NALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFI 145
ALR+ M+ GV PD T+ V++ + + + + VH + +E +
Sbjct: 185 KALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLL 244
Query: 146 NLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGV 205
+Y K G+ S+ +F++ SW A+I ++G + A+R F M + G P+ V
Sbjct: 245 TMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLV 304
Query: 206 TMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFA 265
T+ S+ S+CG +G ++ G +H + + L +LV++Y +CG++ V
Sbjct: 305 TLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSL-ALVELYAECGKLSDCETVLR 363
Query: 266 TMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQE 325
+ +RN+ +W SLI YA G V +AL F M ++P+ T +SAC + G V
Sbjct: 364 VVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPL 423
Query: 326 GRCYFDMMKNVYGITPRLQ-----HYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGC 380
G K ++G R ++D+ ++G +D A + ++ + + + W
Sbjct: 424 G-------KQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHR-SVVTWNS 475
Query: 381 LMGACETYGN 390
++ GN
Sbjct: 476 MLCGFSQNGN 485
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/430 (33%), Positives = 220/430 (51%), Gaps = 40/430 (9%)
Query: 50 NQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIV 109
N+V++HI NP +N +I+CY+ + P +L M G+ D YT +
Sbjct: 56 NRVFSHI-------QNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPL 108
Query: 110 LKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDE------ 163
LK+ + GK VH ++ G G + LY G A+ VFDE
Sbjct: 109 LKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNV 168
Query: 164 ------------NPDPKLG-------------SWNAVIGGLSQGGLARDAIRVFVNMRRH 198
+ D + G SWN++I LS+ G R+A+ +F M
Sbjct: 169 VVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQ 228
Query: 199 GFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMD 258
GF PD T+V++ S+G L G +H+ + + I + N+LVD Y K G ++
Sbjct: 229 GFDPDEATVVTVLPISASLGVLDTGKWIHSTA-ESSGLFKDFITVGNALVDFYCKSGDLE 287
Query: 259 LAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAG-VRPNYVTFVGVLSAC 317
A +F M RNV SW +LI G A++G ++ F M E G V PN TF+GVL+ C
Sbjct: 288 AATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACC 347
Query: 318 VHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIV 377
+ G+V+ G F +M + + R +HYG MVDL+ R+G + EA K ++ MP+ N+ +
Sbjct: 348 SYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAM 407
Query: 378 WGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKE 437
WG L+ AC ++G+V++ E A L +EP N G YV+LSN+YA +G W++VE++R+ MK+
Sbjct: 408 WGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKK 467
Query: 438 GRLAKVPAYS 447
RL K S
Sbjct: 468 NRLRKSTGQS 477
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 108/267 (40%), Gaps = 30/267 (11%)
Query: 157 ARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGS 216
A VF +P + +NA+I S G +++ F +M+ G D T L +C S
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS 114
Query: 217 VGDLQLG----------------------LQLHTCVYHAKAAERT-------DILMWNSL 247
+ DL+ G ++L+T A++ ++++WN +
Sbjct: 115 LSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLM 174
Query: 248 VDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNY 307
+ + G ++ +F M ER++ SW S+I + G EALE F M + G P+
Sbjct: 175 IRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDE 234
Query: 308 VTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVE 367
T V VL G + G+ ++ + +VD ++G L+ A +
Sbjct: 235 ATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFR 294
Query: 368 EMPMKPNSIVWGCLMGACETYGNVEMG 394
+M + N + W L+ G E G
Sbjct: 295 KM-QRRNVVSWNTLISGSAVNGKGEFG 320
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 180/302 (59%), Gaps = 3/302 (0%)
Query: 148 YCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTM 207
Y K+GE SA+ +F E P SW+ +I G++ G ++ F ++R G +P+ V++
Sbjct: 213 YIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSL 272
Query: 208 VSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATM 267
+ SAC G + G LH V KA + + N+L+DMY +CG + +A VF M
Sbjct: 273 TGVLSACSQSGSFEFGKILHGFV--EKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGM 330
Query: 268 DE-RNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEG 326
E R + SWTS+I G AMHG EA+ F M GV P+ ++F+ +L AC H G ++EG
Sbjct: 331 QEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEG 390
Query: 327 RCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACE 386
YF MK VY I P ++HYGCMVDL GR+G L +A + +MP+ P +IVW L+GAC
Sbjct: 391 EDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACS 450
Query: 387 TYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAY 446
++GN+E+ E V + L L+P N G V+LSN YA G WK+V IR SM R+ K A+
Sbjct: 451 SHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAW 510
Query: 447 SL 448
SL
Sbjct: 511 SL 512
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 168/374 (44%), Gaps = 44/374 (11%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAG-VLPDRYTLPIVLKAVCQSFAIELGK 123
P F +N ++R Y+ + P N++ + V M+R G V PD ++ V+KAV ++ G
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126
Query: 124 QVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGG 183
Q+H +K GL+++ + T I +Y G AR VFDE P L +WNAVI +G
Sbjct: 127 QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGN 186
Query: 184 LARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILM 243
A +F M ++ HT
Sbjct: 187 DVAGAREIFDKML---------------------------VRNHTS-------------- 205
Query: 244 WNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGV 303
WN ++ Y K G ++ A ++F+ M R+ SW+++IVG A +G NE+ F ++ AG+
Sbjct: 206 WNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGM 265
Query: 304 RPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAM 363
PN V+ GVLSAC G + G+ ++ G + + ++D+ R G + A
Sbjct: 266 SPNEVSLTGVLSACSQSGSFEFGKILHGFVEKA-GYSWIVSVNNALIDMYSRCGNVPMAR 324
Query: 364 KMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDG-AYVVLSNIYANK 422
+ E M K + W ++ +G E + + A DG +++ L + ++
Sbjct: 325 LVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHA 384
Query: 423 GMWKEVERIRSSMK 436
G+ +E E S MK
Sbjct: 385 GLIEEGEDYFSEMK 398
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 147/465 (31%), Positives = 250/465 (53%), Gaps = 36/465 (7%)
Query: 1 MLRFFFQ-LGRRCYSVSQRSITQTLLLDSANNPVTLIATQL---CNCTHIHQLN---QVY 53
M R + + + ++C S SQ Q+ L + + + + ++L C + L+ Q++
Sbjct: 1 MARVYMETMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIF 60
Query: 54 AHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLML----------RAGVLPDR 103
+I + P +WN IIR + P A + ML R L
Sbjct: 61 RYIPK-------PLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCS 113
Query: 104 YTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDE 163
+TL +A+C S +L Q++ + GL + T ++ Y K+G+ SA +FDE
Sbjct: 114 FTLKACARALCSSAMDQLHCQIN----RRGLSADSLLCTTLLDAYSKNGDLISAYKLFDE 169
Query: 164 NPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLG 223
P + SWNA+I GL G A +A+ ++ M G VT+V+ AC +GD++ G
Sbjct: 170 MPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEG 229
Query: 224 LQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMD-ERNVSSWTSLIVGY 282
++H + + ++++ N+ +DMY KCG +D AY+VF +++V +W ++I G+
Sbjct: 230 EN----IFHGYSND--NVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGF 283
Query: 283 AMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPR 342
A+HG + ALE F + + G++P+ V+++ L+AC H G V+ G F+ M G+
Sbjct: 284 AVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMA-CKGVERN 342
Query: 343 LQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQ 402
++HYGC+VDLL RAG L EA ++ M M P+ ++W L+GA E Y +VEM E ++ ++
Sbjct: 343 MKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIK 402
Query: 403 ALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
+ NDG +V+LSN+YA +G WK+V R+R M+ ++ K+P S
Sbjct: 403 EMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLS 447
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 249 bits (635), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 208/381 (54%), Gaps = 14/381 (3%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLP--IVLKAVCQSFAIELGKQVH 126
F W ++ Y + A L M P+R + +L Q +E+ K++
Sbjct: 282 FTWTAMVSGYIQNRMVEEARELFDKM------PERNEVSWNAMLAGYVQGERMEMAKELF 335
Query: 127 SLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLAR 186
+ + T TG Y + G+ + A+ +FD+ P SW A+I G SQ G +
Sbjct: 336 DVMPCRNVSTWNTMITG----YAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSF 391
Query: 187 DAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNS 246
+A+R+FV M R G + + S S C V L+LG QLH + K T + N+
Sbjct: 392 EALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL--VKGGYETGCFVGNA 449
Query: 247 LVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPN 306
L+ MY KCG ++ A +F M +++ SW ++I GY+ HG AL F M+ G++P+
Sbjct: 450 LLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPD 509
Query: 307 YVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMV 366
T V VLSAC H G V +GR YF M YG+ P QHY CMVDLLGRAGLL++A ++
Sbjct: 510 DATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLM 569
Query: 367 EEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWK 426
+ MP +P++ +WG L+GA +GN E+ E A + A+EP N G YV+LSN+YA+ G W
Sbjct: 570 KNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWG 629
Query: 427 EVERIRSSMKEGRLAKVPAYS 447
+V ++R M++ + KVP YS
Sbjct: 630 DVGKLRVRMRDKGVKKVPGYS 650
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 108/230 (46%), Gaps = 12/230 (5%)
Query: 68 PFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHS 127
P +W +I Y++ ALRL V M R G +R + L A+ELGKQ+H
Sbjct: 374 PVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHG 433
Query: 128 LGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARD 187
VK G +T + + +YCK G A +F E + SWN +I G S+ G
Sbjct: 434 RLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEV 493
Query: 188 AIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNS- 246
A+R F +M+R G PD TMV++ SAC G + G Q + +M NS
Sbjct: 494 ALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYG------VMPNSQ 547
Query: 247 ----LVDMYGKCGRMDLAYKVFATMD-ERNVSSWTSLIVGYAMHGHVNEA 291
+VD+ G+ G ++ A+ + M E + + W +L+ +HG+ A
Sbjct: 548 HYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELA 597
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 126/296 (42%), Gaps = 52/296 (17%)
Query: 142 TGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQG---GLARDAIRVFV----- 193
G I+ Y ++GEF AR +FDE P+ L SWN +I G + G AR+ +
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158
Query: 194 --NMRRHGFAPDGVT--MVSLTSACGSVGDLQLGLQLHTCVYHAK---------AAERTD 240
N G+A +G S+ D+ L V ++K + E
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWA 218
Query: 241 ILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMRE 300
++ WN L+ + K ++ A + F +M+ R+V SW ++I GYA G ++EA + F E
Sbjct: 219 LVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLF---DE 275
Query: 301 AGVRPNYVTFVGVLSACVHGGKVQEGRCYFD------------------------MMKNV 336
+ V+ + T+ ++S + V+E R FD M K +
Sbjct: 276 SPVQ-DVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKEL 334
Query: 337 YGITP--RLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGN 390
+ + P + + M+ + G + EA + ++MP K + + W ++ G+
Sbjct: 335 FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSGH 389
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 104/238 (43%), Gaps = 50/238 (21%)
Query: 166 DPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQ 225
D + WN I + G +A+RVF M R V+ + S G+ +L +
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWS----SVSYNGMISGYLRNGEFELARK 116
Query: 226 LHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMH 285
L + ER D++ WN ++ Y + + A ++F M ER+V SW +++ GYA +
Sbjct: 117 LFD-----EMPER-DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQN 170
Query: 286 GHVNEALECFWCMREAGVRPNYVTFVGVLSA--------------------------CVH 319
G V++A F M E N V++ +LSA C+
Sbjct: 171 GCVDDARSVFDRMPE----KNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLL 226
Query: 320 GG-----KVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMK 372
GG K+ E R +FD M NV + + ++ ++G +DEA ++ +E P++
Sbjct: 227 GGFVKKKKIVEARQFFDSM-NVRDVVS----WNTIITGYAQSGKIDEARQLFDESPVQ 279
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 249 bits (635), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 146/424 (34%), Positives = 223/424 (52%), Gaps = 40/424 (9%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAI----- 119
P +N +I Y + + L L M +G D YTL +VLKA +
Sbjct: 97 KPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPR 156
Query: 120 ELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPD------------- 166
L + VH+ +K ++ ++ T ++ Y KSG+ SAR VF+ D
Sbjct: 157 SLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGY 216
Query: 167 ------------------PKLGSWNAVIGGLSQGG-LARDAIRVFVNMRRHGFAPDGVTM 207
+ +NA++ G S+ G A+ ++ ++++M+R GF P+ T
Sbjct: 217 MNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTF 276
Query: 208 VSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATM 267
S+ AC + ++G Q+H + K+ T I M +SL+DMY KCG ++ A +VF M
Sbjct: 277 ASVIGACSVLTSHEVGQQVHAQIM--KSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQM 334
Query: 268 DERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGR 327
E+NV SWTS+I GY +G+ EALE F M+E + PNYVTF+G LSAC H G V +G
Sbjct: 335 QEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGY 394
Query: 328 CYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACET 387
F+ M+ Y + P+++HY C+VDL+GRAG L++A + MP +P+S +W L+ +C
Sbjct: 395 EIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNL 454
Query: 388 YGNVEMGEYVAKHLQALEP-WNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAY 446
+GNVE+ A L L GAY+ LSN+YA+ W V +IR MK R++K
Sbjct: 455 HGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGR 514
Query: 447 SLTT 450
S T+
Sbjct: 515 SWTS 518
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 249 bits (635), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 128/363 (35%), Positives = 202/363 (55%), Gaps = 3/363 (0%)
Query: 86 NALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFI 145
++L + +++ + P+ TL +L + A++LG+++H +K G I
Sbjct: 424 DSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVI 483
Query: 146 NLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGV 205
++Y K G A +F+ + SWN++I +Q AI +F M G D V
Sbjct: 484 DMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCV 543
Query: 206 TMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFA 265
++ + SAC ++ G +H + K + +D+ ++L+DMY KCG + A VF
Sbjct: 544 SISAALSACANLPSESFGKAIHG--FMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFK 601
Query: 266 TMDERNVSSWTSLIVGYAMHGHVNEALECFWCMRE-AGVRPNYVTFVGVLSACVHGGKVQ 324
TM E+N+ SW S+I HG + ++L F M E +G+RP+ +TF+ ++S+C H G V
Sbjct: 602 TMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVD 661
Query: 325 EGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGA 384
EG +F M YGI P+ +HY C+VDL GRAG L EA + V+ MP P++ VWG L+GA
Sbjct: 662 EGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGA 721
Query: 385 CETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVP 444
C + NVE+ E + L L+P N G YV++SN +AN W+ V ++RS MKE + K+P
Sbjct: 722 CRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIP 781
Query: 445 AYS 447
YS
Sbjct: 782 GYS 784
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 158/323 (48%), Gaps = 4/323 (1%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
WN +I Y + +L M+ +GVLPD T +L +V + +E KQ+H
Sbjct: 307 TWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYI 366
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
++ + + + + I+ Y K + A+ +F + + + A+I G GL D++
Sbjct: 367 MRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSL 426
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
+F + + +P+ +T+VS+ G + L+LG +LH + R +I +++D
Sbjct: 427 EMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNI--GCAVID 484
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
MY KCGRM+LAY++F + +R++ SW S+I A + + A++ F M +G+ + V+
Sbjct: 485 MYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVS 544
Query: 310 FVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
LSAC + G+ M + + + ++D+ + G L AM + + M
Sbjct: 545 ISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTM 603
Query: 370 PMKPNSIVWGCLMGACETYGNVE 392
K N + W ++ AC +G ++
Sbjct: 604 KEK-NIVSWNSIIAACGNHGKLK 625
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 116/247 (46%), Gaps = 4/247 (1%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN+II + R AL + ML GV PD T P ++KA C + G S V
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKA-CVALKNFKGIDFLSDTV 164
Query: 131 K-IGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
+G+ NE+ + I Y + G+ +FD WN ++ G ++ G I
Sbjct: 165 SSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVI 224
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
+ F MR +P+ VT + S C S + LG+QLH V + I NSL+
Sbjct: 225 KGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSI--KNSLLS 282
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
MY KCGR D A K+F M + +W +I GY G + E+L F+ M +GV P+ +T
Sbjct: 283 MYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAIT 342
Query: 310 FVGVLSA 316
F +L +
Sbjct: 343 FSSLLPS 349
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 149/332 (44%), Gaps = 28/332 (8%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN ++ Y + A + ++ +M + P+ T VL I+LG Q+H L V
Sbjct: 207 WNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVV 266
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
G+ + +++Y K G F A +F +WN +I G Q GL +++
Sbjct: 267 VSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLT 326
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDM 250
F M G PD +T SL + +L+ Q+H Y + + DI + ++L+D
Sbjct: 327 FFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHC--YIMRHSISLDIFLTSALIDA 384
Query: 251 YGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTF 310
Y KC + +A +F+ + +V +T++I GY +G ++LE F + + + PN +T
Sbjct: 385 YFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITL 444
Query: 311 VGVLSAC-----------VHGGKVQEGRCYFDMMKNVYGITPRLQHYGC-MVDLLGRAGL 358
V +L +HG +++G FD N+ GC ++D+ + G
Sbjct: 445 VSILPVIGILLALKLGRELHGFIIKKG---FDNRCNI----------GCAVIDMYAKCGR 491
Query: 359 LDEAMKMVEEMPMKPNSIVWGCLMGACETYGN 390
++ A ++ E + K + + W ++ C N
Sbjct: 492 MNLAYEIFERLS-KRDIVSWNSMITRCAQSDN 522
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 156/353 (44%), Gaps = 43/353 (12%)
Query: 100 LPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARM 159
+P R L ++L+A + GKQVH+ + + + Y + + +Y G F+
Sbjct: 34 IPRR--LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGK 91
Query: 160 VFD--ENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSV 217
+F + + WN++I + GL A+ + M G +PD T L AC ++
Sbjct: 92 MFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVAL 151
Query: 218 GDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTS 277
+ + G+ + + + + + +SL+ Y + G++D+ K+F + +++ W
Sbjct: 152 KNFK-GIDFLSDTVSSLGMDCNEFVA-SSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNV 209
Query: 278 LIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSAC-----------VHGGKVQEG 326
++ GYA G ++ ++ F MR + PN VTF VLS C +HG V G
Sbjct: 210 MLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSG 269
Query: 327 ----------------RC-YFDMMKNVYGITPRLQ--HYGCMVDLLGRAGLLDEAMKMVE 367
+C FD ++ + R + CM+ ++GL++E++
Sbjct: 270 VDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFY 329
Query: 368 EM---PMKPNSIVWGCLMGACETYGNVEMGE----YVAKHLQALEPWNDGAYV 413
EM + P++I + L+ + + N+E + Y+ +H +L+ + A +
Sbjct: 330 EMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALI 382
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 106/224 (47%), Gaps = 3/224 (1%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WN++I + + P A+ + M +G+ D ++ L A + GK +H
Sbjct: 509 SWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFM 568
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
+K L ++ Y E+ I++Y K G +A VF + + SWN++I G +D++
Sbjct: 569 IKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSL 628
Query: 190 RVFVNM-RRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
+F M + G PD +T + + S+C VGD+ G++ + + + +V
Sbjct: 629 CLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQ-EHYACVV 687
Query: 249 DMYGKCGRMDLAYKVFATMD-ERNVSSWTSLIVGYAMHGHVNEA 291
D++G+ GR+ AY+ +M + W +L+ +H +V A
Sbjct: 688 DLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELA 731
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 248 bits (634), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 139/408 (34%), Positives = 221/408 (54%), Gaps = 14/408 (3%)
Query: 43 CTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPD 102
C ++ +V+ I R P +WN II A+ + M +G +PD
Sbjct: 318 CGFLNSARRVFDQIER-------PDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPD 370
Query: 103 RYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFD 162
+L +L A + A+ G Q+HS +K G + + +Y + +F+
Sbjct: 371 AISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFE 430
Query: 163 E---NPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGD 219
+ N D SWN ++ Q + +R+F M PD +TM +L C +
Sbjct: 431 DFRNNADSV--SWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISS 488
Query: 220 LQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLI 279
L+LG Q+H Y K + + N L+DMY KCG + A ++F +MD R+V SW++LI
Sbjct: 489 LKLGSQVH--CYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLI 546
Query: 280 VGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGI 339
VGYA G EAL F M+ AG+ PN+VTFVGVL+AC H G V+EG + M+ +GI
Sbjct: 547 VGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGI 606
Query: 340 TPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAK 399
+P +H C+VDLL RAG L+EA + ++EM ++P+ +VW L+ AC+T GNV + + A+
Sbjct: 607 SPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAE 666
Query: 400 HLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
++ ++P+N A+V+L +++A+ G W+ +RSSMK+ + K+P S
Sbjct: 667 NILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQS 714
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 175/412 (42%), Gaps = 55/412 (13%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVL-PDRYTLPIVLKAVCQSFAIELGKQVHSL 128
+W++II +++L AL ML GV P+ Y LKA + G Q+H L
Sbjct: 236 SWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGL 295
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
+K L N ++Y + G SAR VFD+ P SWN +I GL+ G A +A
Sbjct: 296 CIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEA 355
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
+ VF MR GF PD +++ SL A L G+Q+H+ Y K D+ + NSL+
Sbjct: 356 VSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHS--YIIKWGFLADLTVCNSLL 413
Query: 249 DMYGKCGRMDLAYKVFATMDERNVS---SWTSLIVGYAMHGHVNEALECFWCMREAGVRP 305
MY C + + +F D RN + SW +++ H E L F M + P
Sbjct: 414 TMYTFCSDLYCCFNLFE--DFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEP 471
Query: 306 NYVTFVGVLSACVHGGKVQEG---RCY--------------------------------F 330
+++T +L CV ++ G CY F
Sbjct: 472 DHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIF 531
Query: 331 DMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMP---MKPNSIVWGCLMGACET 387
D M N ++ + ++ ++G +EA+ + +EM ++PN + + ++ AC
Sbjct: 532 DSMDNRDVVS-----WSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSH 586
Query: 388 YGNVEMGEYVAKHLQA---LEPWNDGAYVVLSNIYANKGMWKEVERIRSSMK 436
G VE G + +Q + P + V+ ++ A G E ER MK
Sbjct: 587 VGLVEEGLKLYATMQTEHGISPTKEHCSCVV-DLLARAGRLNEAERFIDEMK 637
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 154/318 (48%), Gaps = 6/318 (1%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
++ ++I Y++ A+RL++ ML+ ++PD++ ++KA S + LGKQ+H+
Sbjct: 135 SYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQV 194
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
+K+ ++ + I +Y + + + A VF P L SW+++I G SQ G +A+
Sbjct: 195 IKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEAL 254
Query: 190 RVFVNMRRHG-FAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
M G F P+ S AC S+ G Q+H ++ A + + SL
Sbjct: 255 SHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELA--GNAIAGCSLC 312
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYV 308
DMY +CG ++ A +VF ++ + +SW +I G A +G+ +EA+ F MR +G P+ +
Sbjct: 313 DMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAI 372
Query: 309 TFVGVLSACVHGGKVQEG-RCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVE 367
+ +L A + +G + + ++K +G L ++ + L + E
Sbjct: 373 SLRSLLCAQTKPMALSQGMQIHSYIIK--WGFLADLTVCNSLLTMYTFCSDLYCCFNLFE 430
Query: 368 EMPMKPNSIVWGCLMGAC 385
+ +S+ W ++ AC
Sbjct: 431 DFRNNADSVSWNTILTAC 448
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 139/313 (44%), Gaps = 18/313 (5%)
Query: 85 RNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSF-AIELGKQVHSLGVKIGLQTNEYCETG 143
R AL + R I L C S ++ G+++H + + +
Sbjct: 48 REALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNH 107
Query: 144 FINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPD 203
+++Y K G AR VFD P+ L S+ +VI G SQ G +AIR+++ M + PD
Sbjct: 108 ILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPD 167
Query: 204 GVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKV 263
S+ AC S D+ LG QLH V K + ++ N+L+ MY + +M A +V
Sbjct: 168 QFAFGSIIKACASSSDVGLGKQLHAQVI--KLESSSHLIAQNALIAMYVRFNQMSDASRV 225
Query: 264 FATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGV-RPNYVTFVGVLSACVHGGK 322
F + +++ SW+S+I G++ G EAL M GV PN F L AC +
Sbjct: 226 FYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLR 285
Query: 323 VQEGRCYFDMMKNVYGITPRLQHYG------CMVDLLGRAGLLDEAMKMVEEMPMKPNSI 376
G ++G+ + + G + D+ R G L+ A ++ +++ +P++
Sbjct: 286 PDYG-------SQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE-RPDTA 337
Query: 377 VWGCLMGACETYG 389
W ++ G
Sbjct: 338 SWNVIIAGLANNG 350
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 123/299 (41%), Gaps = 46/299 (15%)
Query: 173 NAVIGGLSQGGLARDAIRVF-VNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVY 231
N I L + R+A+ F + F T +SL AC S L G ++H +
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 232 HAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEA 291
++ + D ++ N ++ MYGKCG + A +VF M ERN+ S+TS+I GY+ +G EA
Sbjct: 95 NSNC--KYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEA 152
Query: 292 LECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGR------------------------ 327
+ + M + + P+ F ++ AC V G+
Sbjct: 153 IRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAM 212
Query: 328 -CYFDMMKNV----YGITPR-LQHYGCMVDLLGRAGLLDEAMKMVEEM----PMKPNSIV 377
F+ M + YGI + L + ++ + G EA+ ++EM PN +
Sbjct: 213 YVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYI 272
Query: 378 WGCLMGACET-----YGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERI 431
+G + AC + YG+ G + L N A L ++YA G R+
Sbjct: 273 FGSSLKACSSLLRPDYGSQIHGLCIKSELAG----NAIAGCSLCDMYARCGFLNSARRV 327
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 248 bits (634), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 132/337 (39%), Positives = 194/337 (57%), Gaps = 3/337 (0%)
Query: 102 DRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVF 161
D L +L +S I++G +H +K GL T G I +Y K + + +F
Sbjct: 346 DAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLF 405
Query: 162 DENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMR-RHGFAPDGVTMVSLTSACGSVGDL 220
++ + L SWN+VI G Q G A A VF M G PD +T+ SL + C + L
Sbjct: 406 EQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCL 465
Query: 221 QLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIV 280
LG +LH Y + + + +L+DMY KCG A VF ++ ++W S+I
Sbjct: 466 NLGKELHG--YTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMIS 523
Query: 281 GYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGIT 340
GY++ G + AL C+ MRE G++P+ +TF+GVLSAC HGG V EG+ F M +GI+
Sbjct: 524 GYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGIS 583
Query: 341 PRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKH 400
P LQHY MV LLGRA L EA+ ++ +M +KP+S VWG L+ AC + +E+GEYVA+
Sbjct: 584 PTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARK 643
Query: 401 LQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKE 437
+ L+ N G YV++SN+YA + MW +V R+R+ MK+
Sbjct: 644 MFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKD 680
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 122/225 (54%), Gaps = 4/225 (1%)
Query: 94 MLRAGVLPDRYTLPIVLKAVCQSF-AIELG-KQVHSLGVKIGLQTNEYCETGFINLYCKS 151
+LR+ + P+ +T+ I L+A SF + +L +QV + K GL Y +T +NLY K
Sbjct: 39 LLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKK 98
Query: 152 GEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLT 211
G TSA+M+FDE P+ WNA+I G S+ G DA ++F+ M + GF+P T+V+L
Sbjct: 99 GCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLL 158
Query: 212 SACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERN 271
CG G + G +H AK+ D + N+L+ Y KC + A +F M +++
Sbjct: 159 PFCGQCGFVSQGRSVHGVA--AKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKS 216
Query: 272 VSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSA 316
SW ++I Y+ G EA+ F M E V + VT + +LSA
Sbjct: 217 TVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA 261
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 175/401 (43%), Gaps = 43/401 (10%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN +I Y+R +A +L ++ML+ G P TL +L Q + G+ VH +
Sbjct: 119 WNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAA 178
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
K GL+ + + I+ Y K E SA ++F E D SWN +IG SQ GL +AI
Sbjct: 179 KSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAIT 238
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDM 250
VF NM VT+++L SA S LH V K DI + SLV
Sbjct: 239 VFKNMFEKNVEISPVTIINLLSAHVS------HEPLHCLV--VKCGMVNDISVVTSLVCA 290
Query: 251 YGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTF 310
Y +CG + A +++A+ + ++ TS++ YA G ++ A+ F R+ ++ + V
Sbjct: 291 YSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVAL 350
Query: 311 VGVLSAC-----------VHGGKVQEGRCY--------------FDMMKNVYGITPRLQH 345
VG+L C +HG ++ G C FD ++ V + +LQ
Sbjct: 351 VGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQE 410
Query: 346 -----YGCMVDLLGRAGLLDEAMKMVEEMPMK----PNSIVWGCLMGACETYGNVEMGEY 396
+ ++ ++G A ++ +M + P++I L+ C + +G+
Sbjct: 411 TPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKE 470
Query: 397 VAKHLQALEPWNDG-AYVVLSNIYANKGMWKEVERIRSSMK 436
+ + N+ L ++YA G + E + S+K
Sbjct: 471 LHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIK 511
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 2/163 (1%)
Query: 62 LESNPAPFNWNNIIR-CYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIE 120
L+ P +WN++I C A H +ML G+LPD T+ +L Q +
Sbjct: 408 LQETPL-ISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLN 466
Query: 121 LGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLS 180
LGK++H ++ + + T I++Y K G A VF P +WN++I G S
Sbjct: 467 LGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYS 526
Query: 181 QGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLG 223
GL A+ ++ MR G PD +T + + SAC G + G
Sbjct: 527 LSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEG 569
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 104/234 (44%), Gaps = 4/234 (1%)
Query: 169 LGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTM-VSLTSACGSVGDLQLGLQLH 227
L +++++ G ++ I +F ++ R P+ TM + L + S +L ++
Sbjct: 13 LSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE-Q 71
Query: 228 TCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGH 287
+ K+ + + SL+++Y K G + A +F M ER+ W +LI GY+ +G+
Sbjct: 72 VQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGY 131
Query: 288 VNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYG 347
+A + F M + G P+ T V +L C G V +GR + G+ Q
Sbjct: 132 ECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAK-SGLELDSQVKN 190
Query: 348 CMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHL 401
++ + L A + EM K +++ W ++GA G E V K++
Sbjct: 191 ALISFYSKCAELGSAEVLFREMKDK-STVSWNTMIGAYSQSGLQEEAITVFKNM 243
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 248 bits (634), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 138/381 (36%), Positives = 212/381 (55%), Gaps = 4/381 (1%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+W+ +I CY + A AL + M+ G P+ T+ VL+A + +E G++ H L
Sbjct: 231 SWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELA 290
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
++ GL+T T +++Y K A VF P + SW A+I G + G+A +I
Sbjct: 291 IRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSI 350
Query: 190 RVF-VNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
F + + + PD + MV + +C +G L+ H+ Y K ++ + SLV
Sbjct: 351 EEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHS--YVIKYGFDSNPFIGASLV 408
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCM-REAGVRPNY 307
++Y +CG + A KVF + ++ WTSLI GY +HG +ALE F M + + V+PN
Sbjct: 409 ELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNE 468
Query: 308 VTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVE 367
VTF+ +LSAC H G + EG F +M N Y + P L+HY +VDLLGR G LD A+++ +
Sbjct: 469 VTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITK 528
Query: 368 EMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKE 427
MP P + G L+GAC + N EM E VAK L LE + G Y+++SN+Y KG W+
Sbjct: 529 RMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWEN 588
Query: 428 VERIRSSMKEGRLAKVPAYSL 448
VE++R+S+K+ + K A SL
Sbjct: 589 VEKLRNSVKQRGIKKGLAESL 609
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 164/346 (47%), Gaps = 15/346 (4%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAG-VLPDRYTLPIVLKAVCQSFAIELGK 123
P W++++ + + +P A+ M+ A V PDR TL ++ A + LG+
Sbjct: 124 KPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGR 183
Query: 124 QVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGG 183
VH ++ G + +N Y KS F A +F + + SW+ VI Q G
Sbjct: 184 CVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNG 243
Query: 184 LARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILM 243
A +A+ VF +M G P+ T++ + AC + DL+ G + H + T++ +
Sbjct: 244 AAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELA--IRKGLETEVKV 301
Query: 244 WNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCM-REAG 302
+LVDMY KC + AY VF+ + ++V SW +LI G+ ++G + ++E F M E
Sbjct: 302 STALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENN 361
Query: 303 VRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEA 362
RP+ + V VL +C G +++ +C+ + YG +V+L R G L A
Sbjct: 362 TRPDAILMVKVLGSCSELGFLEQAKCFHSYVIK-YGFDSNPFIGASLVELYSRCGSLGNA 420
Query: 363 MKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWN 408
K+ + +K +++VW L+ +G K +ALE +N
Sbjct: 421 SKVFNGIALK-DTVVWTSLITGYGIHG---------KGTKALETFN 456
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 150/316 (47%), Gaps = 6/316 (1%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
+ WN +++ +R + L M R PD +TLP+ LKA + + G+ +H
Sbjct: 26 YQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGF 85
Query: 129 GVK-IGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARD 187
K + L ++ Y + I +Y K G A +FDE P + +W++++ G + G
Sbjct: 86 VKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQ 145
Query: 188 AIRVFVNM-RRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNS 246
A+ F M PD VT+++L SAC + + +LG +H V + D+ + NS
Sbjct: 146 AVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFV--IRRGFSNDLSLVNS 203
Query: 247 LVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPN 306
L++ Y K A +F + E++V SW+++I Y +G EAL F M + G PN
Sbjct: 204 LLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPN 263
Query: 307 YVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMV 366
T + VL AC +++GR ++ G+ ++ +VD+ + +EA +
Sbjct: 264 VATVLCVLQACAAAHDLEQGRKTHELAIR-KGLETEVKVSTALVDMYMKCFSPEEAYAVF 322
Query: 367 EEMPMKPNSIVWGCLM 382
+P K + + W L+
Sbjct: 323 SRIPRK-DVVSWVALI 337
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 113/242 (46%), Gaps = 9/242 (3%)
Query: 143 GFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAP 202
GF + S AR +F E L WN ++ LS+ + + F +M R P
Sbjct: 2 GFCRKFSSS---VDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKP 58
Query: 203 DGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYK 262
D T+ ACG + ++ G +H V +D+ + +SL+ MY KCGRM A +
Sbjct: 59 DNFTLPVALKACGELREVNYGEMIHGFV-KKDVTLGSDLYVGSSLIYMYIKCGRMIEALR 117
Query: 263 VFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAG-VRPNYVTFVGVLSACVHGG 321
+F +++ ++ +W+S++ G+ +G +A+E F M A V P+ VT + ++SAC
Sbjct: 118 MFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLS 177
Query: 322 KVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAM---KMVEEMPMKPNSIVW 378
+ GRC + G + L +++ ++ EA+ KM+ E + S V
Sbjct: 178 NSRLGRCVHGFVIR-RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVI 236
Query: 379 GC 380
C
Sbjct: 237 AC 238
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 248 bits (632), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 136/405 (33%), Positives = 219/405 (54%), Gaps = 11/405 (2%)
Query: 45 HIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAG-VLPDR 103
H+H L + + + L + N+ ++ Y P AL R D
Sbjct: 7 HLHSLGVI--NKFDSFLLHFHTKSLKSNHTLKQYLESGEPIKALLDFRHRFRQSPSFVDS 64
Query: 104 YTLPIVLKAVCQSFAIEL-GKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFD 162
+++ +K A L G+Q+H+L K+G +T + Y G+ AR VFD
Sbjct: 65 FSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFD 124
Query: 163 ENPDPK-LGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQ 221
E P+ + + W A+I ++ + +AI +F M DGV + SAC +G +Q
Sbjct: 125 ETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQ 184
Query: 222 LGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVG 281
+G ++++ K D+ + NSL++MY K G + A K+F ++V+++TS+I G
Sbjct: 185 MGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFG 244
Query: 282 YAMHGHVNEALECFWCMR------EAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKN 335
YA++G E+LE F M+ + + PN VTF+GVL AC H G V+EG+ +F M
Sbjct: 245 YALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIM 304
Query: 336 VYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGE 395
Y + PR H+GCMVDL R+G L +A + + +MP+KPN+++W L+GAC +GNVE+GE
Sbjct: 305 DYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGE 364
Query: 396 YVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRL 440
V + + L+ + G YV LSNIYA+KGMW E ++R +++ R+
Sbjct: 365 EVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKRRM 409
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 117/291 (40%), Positives = 182/291 (62%), Gaps = 4/291 (1%)
Query: 148 YCKSGEFTSARMVFDENPDP--KLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGV 205
Y K+G+ AR++FD+ P P + +W +I G ++ GL ++A R+ M G D
Sbjct: 257 YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAA 316
Query: 206 TMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFA 265
++S+ +AC G L LG+++H+ + + +L N+L+DMY KCG + A+ VF
Sbjct: 317 AVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVL--NALLDMYAKCGNLKKAFDVFN 374
Query: 266 TMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQE 325
+ ++++ SW +++ G +HGH EA+E F MR G+RP+ VTF+ VL +C H G + E
Sbjct: 375 DIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDE 434
Query: 326 GRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGAC 385
G YF M+ VY + P+++HYGC+VDLLGR G L EA+K+V+ MPM+PN ++WG L+GAC
Sbjct: 435 GIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGAC 494
Query: 386 ETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMK 436
+ V++ + V +L L+P + G Y +LSNIYA W+ V IRS MK
Sbjct: 495 RMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMK 545
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 170/384 (44%), Gaps = 44/384 (11%)
Query: 39 QLCNCTHIHQLNQVYAHILRTHFLES-NPAP------------------FNW-------- 71
L C +++Q+ Q++A I+R + E + AP FN
Sbjct: 25 DLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHL 84
Query: 72 -NNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
N++IR + + P A + M R G+ D +T P +LKA + + K +H+
Sbjct: 85 CNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIE 144
Query: 131 KIGLQTNEYCETGFINLYCKSGEF--TSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
K+GL ++ Y I+ Y + G A +F++ + SWN+++GGL + G RDA
Sbjct: 145 KLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDA 204
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
R+F M + D ++ ++ ++ +L K ER + W+++V
Sbjct: 205 RRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFE-----KMPERNTV-SWSTMV 254
Query: 249 DMYGKCGRMDLAYKVFATM--DERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPN 306
Y K G M++A +F M +NV +WT +I GYA G + EA M +G++ +
Sbjct: 255 MGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFD 314
Query: 307 YVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMV 366
+ +L+AC G + G ++K + ++D+ + G L +A +
Sbjct: 315 AAAVISILAACTESGLLSLGMRIHSILKR-SNLGSNAYVLNALLDMYAKCGNLKKAFDVF 373
Query: 367 EEMPMKPNSIVWGCLMGACETYGN 390
++P K + + W ++ +G+
Sbjct: 374 NDIP-KKDLVSWNTMLHGLGVHGH 396
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 110/230 (47%), Gaps = 10/230 (4%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
W II Y + A RL M+ +G+ D + +L A +S + LG ++HS+
Sbjct: 283 WTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILK 342
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
+ L +N Y +++Y K G A VF++ P L SWN ++ GL G ++AI
Sbjct: 343 RSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIE 402
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDIL----MWNS 246
+F MRR G PD VT +++ +C G + G+ Y + D++ +
Sbjct: 403 LFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGID-----YFYSMEKVYDLVPQVEHYGC 457
Query: 247 LVDMYGKCGRMDLAYKVFATMD-ERNVSSWTSLIVGYAMHGHVNEALECF 295
LVD+ G+ GR+ A KV TM E NV W +L+ MH V+ A E
Sbjct: 458 LVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVL 507
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 130/315 (41%), Gaps = 46/315 (14%)
Query: 123 KQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQG 182
KQ+H+ ++ L + + I+ + A VF++ +P + N++I +Q
Sbjct: 36 KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQN 95
Query: 183 GLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDIL 242
A VF M+R G D T L AC L + +H + K +DI
Sbjct: 96 SQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHI--EKLGLSSDIY 153
Query: 243 MWNSLVDMYGKCGRMDL--AYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMRE 300
+ N+L+D Y +CG + + A K+F M ER+ SW S++ G
Sbjct: 154 VPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGL------------------ 195
Query: 301 AGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLD 360
V G++++ R FD M I+ + M+D R +
Sbjct: 196 -----------------VKAGELRDARRLFDEMPQRDLIS-----WNTMLDGYARCREMS 233
Query: 361 EAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYA 420
+A ++ E+MP + N++ W ++ G++EM + + L N + ++ YA
Sbjct: 234 KAFELFEKMPER-NTVSWSTMVMGYSKAGDMEMARVMFDKM-PLPAKNVVTWTIIIAGYA 291
Query: 421 NKGMWKEVERIRSSM 435
KG+ KE +R+ M
Sbjct: 292 EKGLLKEADRLVDQM 306
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/385 (34%), Positives = 216/385 (56%), Gaps = 3/385 (0%)
Query: 64 SNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGK 123
S+ + ++ ++I Y R A++L M G+ PD YT+ VL + ++ GK
Sbjct: 358 SDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGK 417
Query: 124 QVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGG 183
+VH + L + + +++Y K G A +VF E + SWN +IGG S+
Sbjct: 418 RVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNC 477
Query: 184 LARDAIRVF-VNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDIL 242
A +A+ +F + + F+PD T+ + AC S+ G ++H Y + +D
Sbjct: 478 YANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHG--YIMRNGYFSDRH 535
Query: 243 MWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAG 302
+ NSLVDMY KCG + LA+ +F + +++ SWT +I GY MHG EA+ F MR+AG
Sbjct: 536 VANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAG 595
Query: 303 VRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEA 362
+ + ++FV +L AC H G V EG +F++M++ I P ++HY C+VD+L R G L +A
Sbjct: 596 IEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKA 655
Query: 363 MKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANK 422
+ +E MP+ P++ +WG L+ C + +V++ E VA+ + LEP N G YV+++NIYA
Sbjct: 656 YRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEA 715
Query: 423 GMWKEVERIRSSMKEGRLAKVPAYS 447
W++V+R+R + + L K P S
Sbjct: 716 EKWEQVKRLRKRIGQRGLRKNPGCS 740
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 164/344 (47%), Gaps = 13/344 (3%)
Query: 42 NCTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLP 101
NC + + ++V+ + + A F WN ++ + ++ L M+ +GV
Sbjct: 141 NCGDLKEASRVFDEV------KIEKALF-WNILMNELAKSGDFSGSIGLFKKMMSSGVEM 193
Query: 102 DRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVF 161
D YT V K+ ++ G+Q+H +K G + Y K+ SAR VF
Sbjct: 194 DSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVF 253
Query: 162 DENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQ 221
DE + + SWN++I G GLA + VFV M G D T+VS+ + C +
Sbjct: 254 DEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLIS 313
Query: 222 LGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVG 281
LG +H+ KA + N+L+DMY KCG +D A VF M +R+V S+TS+I G
Sbjct: 314 LGRAVHS--IGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAG 371
Query: 282 YAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMK-NVYGIT 340
YA G EA++ F M E G+ P+ T VL+ C + EG+ + +K N G
Sbjct: 372 YAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFD 431
Query: 341 PRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGA 384
+ + ++D+ + G + EA + EM +K + I W ++G
Sbjct: 432 IFVSN--ALMDMYAKCGSMQEAELVFSEMRVK-DIISWNTIIGG 472
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 171/352 (48%), Gaps = 18/352 (5%)
Query: 50 NQVYAHILRTHFLESNPAPFN---------WNNIIRCYTRLEAPRNALRLHVLMLRAGVL 100
N + A L+ ++S F+ WN+II Y L + V ML +G+
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293
Query: 101 PDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGL-QTNEYCETGFINLYCKSGEFTSARM 159
D T+ V S I LG+ VHS+GVK + + +C T +++Y K G+ SA+
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNT-LLDMYSKCGDLDSAKA 352
Query: 160 VFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGD 219
VF E D + S+ ++I G ++ GLA +A+++F M G +PD T+ ++ + C
Sbjct: 353 VFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRL 412
Query: 220 LQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLI 279
L G ++H + DI + N+L+DMY KCG M A VF+ M +++ SW ++I
Sbjct: 413 LDEGKRVHEWIKENDLG--FDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTII 470
Query: 280 VGYAMHGHVNEALECF-WCMREAGVRPNYVTFVGVLSACVHGGKVQEGR-CYFDMMKNVY 337
GY+ + + NEAL F + E P+ T VL AC +GR + +M+N Y
Sbjct: 471 GGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGY 530
Query: 338 GITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYG 389
+ + +VD+ + G L A + +++ K + + W ++ +G
Sbjct: 531 FSDRHVAN--SLVDMYAKCGALLLAHMLFDDIASK-DLVSWTVMIAGYGMHG 579
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 158/373 (42%), Gaps = 44/373 (11%)
Query: 102 DRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVF 161
D TL VL+ S +++ GK+V + G + + +Y G+ A VF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 162 DENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQ 221
DE K WN ++ L++ G +I +F M G D T ++ + S+ +
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 222 LGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVG 281
G QLH + + ER + NSLV Y K R+D A KVF M ER+V SW S+I G
Sbjct: 213 GGEQLHGFILKSGFGERNSV--GNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 270
Query: 282 YAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGR---------CY--- 329
Y +G + L F M +G+ + T V V + C + GR C+
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 330
Query: 330 ----------------FDMMKNVY-GITPR-LQHYGCMVDLLGRAGLLDEAMKMVEEMP- 370
D K V+ ++ R + Y M+ R GL EA+K+ EEM
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 371 --MKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVV-----LSNIYANKG 423
+ P+ ++ C Y ++ G+ V + ++ ND + + L ++YA G
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE----NDLGFDIFVSNALMDMYAKCG 446
Query: 424 MWKEVERIRSSMK 436
+E E + S M+
Sbjct: 447 SMQEAELVFSEMR 459
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 245 bits (625), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 203/379 (53%), Gaps = 3/379 (0%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
++N +I Y++ + +L M G + +L ++++G+Q+H
Sbjct: 318 SYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQA 377
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
+ + + +++Y K F A ++F P SW A+I G Q GL +
Sbjct: 378 LLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGL 437
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
++F MR D T ++ A S L LG QLH + + E ++ + LVD
Sbjct: 438 KLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE--NVFSGSGLVD 495
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
MY KCG + A +VF M +RN SW +LI +A +G A+ F M E+G++P+ V+
Sbjct: 496 MYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVS 555
Query: 310 FVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
+GVL+AC H G V++G YF M +YGITP+ +HY CM+DLLGR G EA K+++EM
Sbjct: 556 ILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEM 615
Query: 370 PMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWND-GAYVVLSNIYANKGMWKEV 428
P +P+ I+W ++ AC + N + E A+ L ++E D AYV +SNIYA G W++V
Sbjct: 616 PFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKV 675
Query: 429 ERIRSSMKEGRLAKVPAYS 447
++ +M+E + KVPAYS
Sbjct: 676 RDVKKAMRERGIKKVPAYS 694
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 155/339 (45%), Gaps = 6/339 (1%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+N +I Y + ++ L + M ++G P +T VLKAV LG+Q+H+L
Sbjct: 217 TFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALS 276
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
V G + ++ Y K RM+FDE P+ S+N VI SQ ++
Sbjct: 277 VTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASL 336
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
F M+ GF ++ S ++ LQ+G QLH A A + + + NSLVD
Sbjct: 337 HFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATA--DSILHVGNSLVD 394
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
MY KC + A +F ++ +R SWT+LI GY G L+ F MR + +R + T
Sbjct: 395 MYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQST 454
Query: 310 FVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
F VL A + G+ + + G +VD+ + G + +A+++ EEM
Sbjct: 455 FATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG-LVDMYAKCGSIKDAVQVFEEM 513
Query: 370 PMKPNSIVWGCLMGACETYGNVE--MGEYVAKHLQALEP 406
P + N++ W L+ A G+ E +G + L+P
Sbjct: 514 PDR-NAVSWNALISAHADNGDGEAAIGAFAKMIESGLQP 551
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 132/319 (41%), Gaps = 10/319 (3%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAG--VLPDRYTLPIVLKAVCQSFAIELGKQVHS 127
W ++ Y R A +L M R+ LPD T +L + QVH+
Sbjct: 112 TWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHA 171
Query: 128 LGVKIGLQTNEYCETGFINL--YCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLA 185
VK+G TN + + L YC+ A ++F+E P+ ++N +I G + GL
Sbjct: 172 FAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLY 231
Query: 186 RDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWN 245
++I +F+ MR+ G P T + A + D LG QLH D + N
Sbjct: 232 TESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLH--ALSVTTGFSRDASVGN 289
Query: 246 SLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRP 305
++D Y K R+ +F M E + S+ +I Y+ +L F M+ G
Sbjct: 290 QILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDR 349
Query: 306 NYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYG-CMVDLLGRAGLLDEAMK 364
F +LS + +Q GR + + + H G +VD+ + + +EA
Sbjct: 350 RNFPFATMLSIAANLSSLQMGRQLH--CQALLATADSILHVGNSLVDMYAKCEMFEEAEL 407
Query: 365 MVEEMPMKPNSIVWGCLMG 383
+ + +P + ++ W L+
Sbjct: 408 IFKSLPQR-TTVSWTALIS 425
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 137/344 (39%), Gaps = 50/344 (14%)
Query: 137 NEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMR 196
N I+ + K+G+ +SAR +FD PD + +W ++G ++ +A ++F M
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 197 RHGFA--PDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKC 254
R PD VT +L C Q+H + + N L+ Y +
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV 197
Query: 255 GRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVL 314
R+DLA +F + E++ ++ +LI GY G E++ F MR++G +P+ TF GVL
Sbjct: 198 RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 257
Query: 315 SACV-----------------------------------HGGKVQEGRCYFDMMKNVYGI 339
A V +V E R FD M + +
Sbjct: 258 KAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFV 317
Query: 340 TPRLQHYGCMVDLLGRAGLLDEAMKMVEEMP---MKPNSIVWGCLMGACETYGNVEMGEY 396
+ Y ++ +A + ++ EM + + ++ +++MG
Sbjct: 318 S-----YNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQ 372
Query: 397 VAKHLQALEPWNDGAYVV---LSNIYANKGMWKEVERIRSSMKE 437
+ H QAL D V L ++YA M++E E I S+ +
Sbjct: 373 L--HCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQ 414
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 131/353 (37%), Positives = 200/353 (56%), Gaps = 4/353 (1%)
Query: 96 RAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFT 155
R G D Y L +++ + G H L +K G ++ Y + + LY SGE
Sbjct: 113 RDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVE 172
Query: 156 SARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACG 215
+A VF+E P+ + SW A+I G +Q ++++ MR+ P+ T +L SAC
Sbjct: 173 NAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACT 232
Query: 216 SVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSW 275
G L G +H H ++ + + NSL+ MY KCG + A+++F ++V SW
Sbjct: 233 GSGALGQGRSVHCQTLHM--GLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSW 290
Query: 276 TSLIVGYAMHGHVNEALECFWCMR-EAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMK 334
S+I GYA HG +A+E F M ++G +P+ +T++GVLS+C H G V+EGR +F++M
Sbjct: 291 NSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMA 350
Query: 335 NVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMG 394
+G+ P L HY C+VDLLGR GLL EA++++E MPMKPNS++WG L+ +C +G+V G
Sbjct: 351 E-HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTG 409
Query: 395 EYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
A+ LEP +V L+N+YA+ G WKE +R MK+ L P S
Sbjct: 410 IRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCS 462
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 113/221 (51%), Gaps = 4/221 (1%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+W +I + + L+L+ M ++ P+ YT +L A S A+ G+ VH
Sbjct: 188 SWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQT 247
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
+ +GL++ + I++YCK G+ A +FD+ + + SWN++I G +Q GLA AI
Sbjct: 248 LHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAI 307
Query: 190 RVF-VNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
+F + M + G PD +T + + S+C G ++ G + + A+ + ++ ++ LV
Sbjct: 308 ELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLM--AEHGLKPELNHYSCLV 365
Query: 249 DMYGKCGRMDLAYKVFATMDER-NVSSWTSLIVGYAMHGHV 288
D+ G+ G + A ++ M + N W SL+ +HG V
Sbjct: 366 DLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDV 406
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 144/440 (32%), Positives = 231/440 (52%), Gaps = 7/440 (1%)
Query: 10 RRCYSVSQRSITQTLLLDSANNPVTLIATQLCNCTHIHQLNQVYAHILRTHFLESNPAPF 69
+ C S+ + ++ S + I QL C ++ + V A L E +
Sbjct: 42 KSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGC-YLRLGHDVCAEKLFDEMPERDLV-- 98
Query: 70 NWNNIIRCYTRLEAPRNALRL--HVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHS 127
+WN++I Y+ + +++ G P+ T ++ A + E G+ +H
Sbjct: 99 SWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHG 158
Query: 128 LGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARD 187
L +K G+ FIN Y K+G+ TS+ +F++ L SWN +I Q GLA
Sbjct: 159 LVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEK 218
Query: 188 AIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSL 247
+ F RR G PD T +++ +C +G ++L +H + + I +L
Sbjct: 219 GLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCIT--TAL 276
Query: 248 VDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNY 307
+D+Y K GR++ + VF + + +WT+++ YA HG +A++ F M G+ P++
Sbjct: 277 LDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDH 336
Query: 308 VTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVE 367
VTF +L+AC H G V+EG+ YF+ M Y I PRL HY CMVDLLGR+GLL +A +++
Sbjct: 337 VTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIK 396
Query: 368 EMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKE 427
EMPM+P+S VWG L+GAC Y + ++G A+ L LEP + YV+LSNIY+ G+WK+
Sbjct: 397 EMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKD 456
Query: 428 VERIRSSMKEGRLAKVPAYS 447
RIR+ MK+ L + S
Sbjct: 457 ASRIRNLMKQKGLVRASGCS 476
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 135/303 (44%), Gaps = 19/303 (6%)
Query: 109 VLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPK 168
++ AV +IEL + +H VK + + + Y + G A +FDE P+
Sbjct: 37 LIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERD 96
Query: 169 LGSWNAVIGGLSQGGLARDAIRVFVNM--RRHGFAPDGVTMVSLTSACGSVGDLQLGLQL 226
L SWN++I G S G V M GF P+ VT +S+ SAC G + G +
Sbjct: 97 LVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCI 156
Query: 227 HTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHG 286
H V E ++ N+ ++ YGK G + + K+F + +N+ SW ++IV + +G
Sbjct: 157 HGLVMKFGVLEEVKVV--NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNG 214
Query: 287 HVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQ-----EGRCYFDMMKNVYGITP 341
+ L F R G P+ TF+ VL +C G V+ G F IT
Sbjct: 215 LAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITT 274
Query: 342 RLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHL 401
L +DL + G L+++ + E+ P+S+ W ++ A T+G G KH
Sbjct: 275 AL------LDLYSKLGRLEDSSTVFHEIT-SPDSMAWTAMLAAYATHG---FGRDAIKHF 324
Query: 402 QAL 404
+ +
Sbjct: 325 ELM 327
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/378 (34%), Positives = 205/378 (54%), Gaps = 3/378 (0%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
W +I YT + AL L M + P+ T+ VL +ELG+ VH L +
Sbjct: 311 WTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSI 370
Query: 131 KIGL-QTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
K+G+ TN +++Y K + A+ VF+ + + +WN++I G SQ G +A+
Sbjct: 371 KVGIWDTN--VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEAL 428
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
+F M P+GVT+ SL SAC S+G L +G LH + + + +L+D
Sbjct: 429 FLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLD 488
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
Y KCG A +F T++E+N +W+++I GY G +LE F M + +PN T
Sbjct: 489 FYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNEST 548
Query: 310 FVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
F +LSAC H G V EG+ YF M Y TP +HY CMVD+L RAG L++A+ ++E+M
Sbjct: 549 FTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKM 608
Query: 370 PMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVE 429
P++P+ +G + C + ++GE V K + L P + YV++SN+YA+ G W + +
Sbjct: 609 PIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAK 668
Query: 430 RIRSSMKEGRLAKVPAYS 447
+R+ MK+ L+K+ +S
Sbjct: 669 EVRNLMKQRGLSKIAGHS 686
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 176/370 (47%), Gaps = 12/370 (3%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
W ++I Y + + L L M VL + YT ++ A + A+ GK H V
Sbjct: 210 WTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLV 269
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
K G++ + T +++Y K G+ ++AR VF+E+ L W A+I G + G +A+
Sbjct: 270 KSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALS 329
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDM 250
+F M+ P+ VT+ S+ S CG + +L+LG +H D + N+LV M
Sbjct: 330 LFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW---DTNVANALVHM 386
Query: 251 YGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTF 310
Y KC + A VF E+++ +W S+I G++ +G ++EAL F M V PN VT
Sbjct: 387 YAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTV 446
Query: 311 VGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYG-CMVDLLGRAGLLDEAMKMVEEM 369
+ SAC G + G + + H G ++D + G A +++ +
Sbjct: 447 ASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSA-RLIFDT 505
Query: 370 PMKPNSIVWGCLMGAC----ETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMW 425
+ N+I W ++G +T G++E+ E + K Q +P N+ + + + + GM
Sbjct: 506 IEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQ--KP-NESTFTSILSACGHTGMV 562
Query: 426 KEVERIRSSM 435
E ++ SSM
Sbjct: 563 NEGKKYFSSM 572
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 162/361 (44%), Gaps = 35/361 (9%)
Query: 66 PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQV 125
P + W ++RCY + ++L+ L+++ G D LKA + ++ GK++
Sbjct: 105 PDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKI 164
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLA 185
H VK+ N TG +++Y K GE SA VF++ + W ++I G + L
Sbjct: 165 HCQLVKVPSFDN-VVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLC 223
Query: 186 RDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWN 245
+ + +F MR + + T +L AC + L G H C+ K+ +
Sbjct: 224 EEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCL--VKSGIELSSCLVT 281
Query: 246 SLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRP 305
SL+DMY KCG + A +VF ++ WT++IVGY +G VNEAL F M+ ++P
Sbjct: 282 SLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKP 341
Query: 306 NYVTFVGVLSAC-----------VHGGKVQEG---------------RCYFDM-MKNVYG 338
N VT VLS C VHG ++ G +CY + K V+
Sbjct: 342 NCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFE 401
Query: 339 ITPR--LQHYGCMVDLLGRAGLLDEAMKMVEEM---PMKPNSIVWGCLMGACETYGNVEM 393
+ + + ++ + G + EA+ + M + PN + L AC + G++ +
Sbjct: 402 MESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAV 461
Query: 394 G 394
G
Sbjct: 462 G 462
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 145/335 (43%), Gaps = 36/335 (10%)
Query: 119 IELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGG 178
I+ +Q H + GL + T ++LY G AR+VFD+ P+P W ++
Sbjct: 57 IDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRC 116
Query: 179 LSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAER 238
+ + ++++ + +HGF D + AC + DL G ++H + +
Sbjct: 117 YCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSF-- 174
Query: 239 TDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCM 298
D ++ L+DMY KCG + A+KVF + RNV WTS+I GY + E L F M
Sbjct: 175 -DNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRM 233
Query: 299 REAGVRPNYVTFVGVLSAC-----VHGGK----------VQEGRCYFDMMKNVY------ 337
RE V N T+ ++ AC +H GK ++ C + ++Y
Sbjct: 234 RENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDI 293
Query: 338 GITPRLQHYGCMVDLL---------GRAGLLDEAMKMVEEMP---MKPNSIVWGCLMGAC 385
R+ + VDL+ G ++EA+ + ++M +KPN + ++ C
Sbjct: 294 SNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC 353
Query: 386 ETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYA 420
N+E+G V + W+ L ++YA
Sbjct: 354 GLIENLELGRSVHGLSIKVGIWDTNVANALVHMYA 388
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 107/231 (46%), Gaps = 4/231 (1%)
Query: 62 LESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIEL 121
+ES WN+II +++ + AL L M V P+ T+ + A ++ +
Sbjct: 402 MESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAV 461
Query: 122 GKQVHSLGVKIGL--QTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGL 179
G +H+ VK+G ++ + T ++ Y K G+ SAR++FD + +W+A+IGG
Sbjct: 462 GSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGY 521
Query: 180 SQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERT 239
+ G ++ +F M + P+ T S+ SACG G + G + + +Y +
Sbjct: 522 GKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPS 581
Query: 240 DILMWNSLVDMYGKCGRMDLAYKVFATMD-ERNVSSWTSLIVGYAMHGHVN 289
+ +VDM + G ++ A + M + +V + + + G MH +
Sbjct: 582 -TKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFD 631
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/307 (40%), Positives = 180/307 (58%), Gaps = 3/307 (0%)
Query: 142 TGFINLYCKSGEFTSARMVF-DENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGF 200
T I Y K+ + A +F D + L +WNA+I G + D +++F M G
Sbjct: 221 TAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGI 280
Query: 201 APDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLA 260
P+ + S C + LQLG Q+H V +K+ D+ SL+ MY KCG + A
Sbjct: 281 RPNSSGLSSALLGCSELSALQLGRQIHQIV--SKSTLCNDVTALTSLISMYCKCGELGDA 338
Query: 261 YKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHG 320
+K+F M +++V +W ++I GYA HG+ ++AL F M + +RP+++TFV VL AC H
Sbjct: 339 WKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHA 398
Query: 321 GKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGC 380
G V G YF+ M Y + P+ HY CMVDLLGRAG L+EA+K++ MP +P++ V+G
Sbjct: 399 GLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGT 458
Query: 381 LMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRL 440
L+GAC + NVE+ E+ A+ L L N YV L+NIYA+K W++V R+R MKE +
Sbjct: 459 LLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNV 518
Query: 441 AKVPAYS 447
KVP YS
Sbjct: 519 VKVPGYS 525
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 3/201 (1%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN +I Y P + L+L ML G+ P+ L L + A++LG+Q+H +
Sbjct: 252 WNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVS 311
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
K L + T I++YCK GE A +F+ + +WNA+I G +Q G A A+
Sbjct: 312 KSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALC 371
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQ-LHTCVYHAKAAERTDILMWNSLVD 249
+F M + PD +T V++ AC G + +G+ + V K + D + +VD
Sbjct: 372 LFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPD--HYTCMVD 429
Query: 250 MYGKCGRMDLAYKVFATMDER 270
+ G+ G+++ A K+ +M R
Sbjct: 430 LLGRAGKLEEALKLIRSMPFR 450
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 108/255 (42%), Gaps = 25/255 (9%)
Query: 145 INLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDG 204
++ Y ++ F A+ FD P SWN +I G ++ G A +F +M +
Sbjct: 131 LSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM----MEKNE 186
Query: 205 VTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVF 264
V+ ++ S GDL+ + K A ++ W +++ Y K +++LA +F
Sbjct: 187 VSWNAMISGYIECGDLE------KASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMF 240
Query: 265 ATMD-ERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKV 323
M +N+ +W ++I GY + + L+ F M E G+RPN L C +
Sbjct: 241 KDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSAL 300
Query: 324 QEGRCYFDMMK------NVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIV 377
Q GR ++ +V +T + Y C LG A L E MK K + +
Sbjct: 301 QLGRQIHQIVSKSTLCNDVTALTSLISMY-CKCGELGDAWKLFEVMK-------KKDVVA 352
Query: 378 WGCLMGACETYGNVE 392
W ++ +GN +
Sbjct: 353 WNAMISGYAQHGNAD 367
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 90/211 (42%), Gaps = 18/211 (8%)
Query: 173 NAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYH 232
N +I + G A+RVF MR A + +T SL G D ++ H
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMR----AKNTITWNSLL--IGISKDPSRMMEAHQLF-- 116
Query: 233 AKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEAL 292
D +N ++ Y + + A F M ++ +SW ++I GYA G + +A
Sbjct: 117 -DEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKAR 175
Query: 293 ECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDL 352
E F+ M E N V++ ++S + G +++ +F + V G+ + M+
Sbjct: 176 ELFYSMMEK----NEVSWNAMISGYIECGDLEKASHFFKVAP-VRGVVA----WTAMITG 226
Query: 353 LGRAGLLDEAMKMVEEMPMKPNSIVWGCLMG 383
+A ++ A M ++M + N + W ++
Sbjct: 227 YMKAKKVELAEAMFKDMTVNKNLVTWNAMIS 257
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 90/222 (40%), Gaps = 16/222 (7%)
Query: 240 DILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMR 299
D WN+++ Y + G M+ A ++F +M E+N SW ++I GY G + +A F
Sbjct: 154 DAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAP 213
Query: 300 EAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLL 359
GV V + +++ + KV+ F M + L + M+
Sbjct: 214 VRGV----VAWTAMITGYMKAKKVELAEAMFKDMT----VNKNLVTWNAMISGYVENSRP 265
Query: 360 DEAMKMVEEM---PMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWND-GAYVVL 415
++ +K+ M ++PNS + C +++G + + + ND A L
Sbjct: 266 EDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSL 325
Query: 416 SNIYANKG----MWKEVERIRSSMKEGRLAKVPAYSLTTNSD 453
++Y G WK E ++ A + Y+ N+D
Sbjct: 326 ISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNAD 367
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 134/397 (33%), Positives = 217/397 (54%), Gaps = 21/397 (5%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLH--------VLMLRAG-VLPDRYTLPIVLKAVCQ 115
NP+ F +N +I + + + N+ + H +L R+ V P+ +T P + KA
Sbjct: 68 NPSVFLYNTLI---SSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKA--S 122
Query: 116 SFAIEL---GKQVHSLGVKI--GLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLG 170
F + G+ +H+ +K + + + + + Y G+ AR +F+ +P L
Sbjct: 123 GFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLA 182
Query: 171 SWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCV 230
+WN ++ + V + R P+ +++V+L +C ++G+ G+ H V
Sbjct: 183 TWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAH--V 240
Query: 231 YHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNE 290
Y K + + SL+D+Y KCG + A KVF M +R+VS + ++I G A+HG E
Sbjct: 241 YVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQE 300
Query: 291 ALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMV 350
+E + + G+ P+ TFV +SAC H G V EG F+ MK VYGI P+++HYGC+V
Sbjct: 301 GIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLV 360
Query: 351 DLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDG 410
DLLGR+G L+EA + +++MP+KPN+ +W +G+ +T+G+ E GE KHL LE N G
Sbjct: 361 DLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSG 420
Query: 411 AYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
YV+LSNIYA W +VE+ R MK+ R+ K P S
Sbjct: 421 NYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 241 bits (615), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 132/399 (33%), Positives = 211/399 (52%), Gaps = 24/399 (6%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WN II + + L L V MLR+ + PD +T +LKA C ++ G ++HS
Sbjct: 450 SWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA-CTGGSLGYGMEIHSSI 508
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMV----------------FDENPDPKLG--- 170
VK G+ +N I++Y K G A + ++ + +L
Sbjct: 509 VKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMC 568
Query: 171 -SWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTC 229
SWN++I G + DA +F M G PD T ++ C ++ LG Q+H
Sbjct: 569 VSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQ 628
Query: 230 VYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVN 289
V K ++D+ + ++LVDMY KCG + + +F R+ +W ++I GYA HG
Sbjct: 629 VI--KKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGE 686
Query: 290 EALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCM 349
EA++ F M ++PN+VTF+ +L AC H G + +G YF MMK YG+ P+L HY M
Sbjct: 687 EAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNM 746
Query: 350 VDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETY-GNVEMGEYVAKHLQALEPWN 408
VD+LG++G + A++++ EMP + + ++W L+G C + NVE+ E L L+P +
Sbjct: 747 VDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQD 806
Query: 409 DGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
AY +LSN+YA+ GMW++V +R +M+ +L K P S
Sbjct: 807 SSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCS 845
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 153/328 (46%), Gaps = 18/328 (5%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WN+++ Y + ++ + V M R G+ D T I+LK LG Q+H +
Sbjct: 147 SWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIV 206
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
V++G T+ + +++Y K F + VF P+ SW+A+I G Q L A+
Sbjct: 207 VRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLAL 266
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHA-KAAERTDILMWNSLV 248
+ F M++ S+ +C ++ +L+LG QLH HA K+ D ++ + +
Sbjct: 267 KFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHA---HALKSDFAADGIVRTATL 323
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYV 308
DMY KC M A +F + N S+ ++I GY+ H +AL F + +G+ + +
Sbjct: 324 DMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEI 383
Query: 309 TFVGVLSACVHGGKVQEGRCYFDMMKNVYG--ITPRLQHYGCM----VDLLGRAGLLDEA 362
+ GV AC + EG +YG I L C+ +D+ G+ L EA
Sbjct: 384 SLSGVFRACALVKGLSEGL-------QIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEA 436
Query: 363 MKMVEEMPMKPNSIVWGCLMGACETYGN 390
++ +EM + +++ W ++ A E G
Sbjct: 437 FRVFDEMR-RRDAVSWNAIIAAHEQNGK 463
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 122/481 (25%), Positives = 195/481 (40%), Gaps = 84/481 (17%)
Query: 2 LRFFFQLGRRCYSVSQRSITQTLLLDSANNPVTLIATQLCNCTHIHQLNQVYAH--ILRT 59
L+FF ++ + VSQ SI ++L A + QL H H L +A I+RT
Sbjct: 266 LKFFKEMQKVNAGVSQ-SIYASVLRSCAALSELRLGGQL----HAHALKSDFAADGIVRT 320
Query: 60 HFLE---------------SNPAPFN---WNNIIRCYTRLEAPRNALRLHVLMLRAGVLP 101
L+ N N +N +I Y++ E AL L ++ +G+
Sbjct: 321 ATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGF 380
Query: 102 DRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVF 161
D +L V +A + G Q++ L +K L + I++Y K A VF
Sbjct: 381 DEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVF 440
Query: 162 DENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQ 221
DE SWNA+I Q G + + +FV+M R PD T S+ AC G L
Sbjct: 441 DEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLG 499
Query: 222 LGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDER-NVS------- 273
G+++H+ + + A + + SL+DMY KCG ++ A K+ + +R NVS
Sbjct: 500 YGMEIHSSIVKSGMASNSSV--GCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELE 557
Query: 274 ------------SWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVH-- 319
SW S+I GY M +A F M E G+ P+ T+ VL C +
Sbjct: 558 KMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLA 617
Query: 320 ----GGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDL----------------------- 352
G ++ ++ +VY + + Y DL
Sbjct: 618 SAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMIC 677
Query: 353 -LGRAGLLDEAMKMVEEMPM---KPNSIVWGCLMGACETYGNVEMGE---YVAKHLQALE 405
G +EA+++ E M + KPN + + ++ AC G ++ G Y+ K L+
Sbjct: 678 GYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLD 737
Query: 406 P 406
P
Sbjct: 738 P 738
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 108/243 (44%), Gaps = 33/243 (13%)
Query: 106 LPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENP 165
V K + A+ELGKQ H+ + G + + + +Y S +F SA MVFD+ P
Sbjct: 51 FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 166 DPKLGSWNAVI-------------------------------GGLSQGGLARDAIRVFVN 194
+ SWN +I G Q G + +I VFV+
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVD 170
Query: 195 MRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKC 254
M R G DG T + C + D LG+Q+H V + TD++ ++L+DMY K
Sbjct: 171 MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIV--VRVGCDTDVVAASALLDMYAKG 228
Query: 255 GRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVL 314
R + +VF + E+N SW+++I G + ++ AL+ F M++ + + VL
Sbjct: 229 KRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVL 288
Query: 315 SAC 317
+C
Sbjct: 289 RSC 291
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 20/155 (12%)
Query: 240 DILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMR 299
D++ WN +++ Y K M A F M R+V SW S++ GY +G +++E F M
Sbjct: 113 DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG 172
Query: 300 EAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLL 359
G+ + TF +L C G ++GI R+ GC D++ + LL
Sbjct: 173 REGIEFDGRTFAIILKVCSFLEDTSLGM-------QIHGIVVRV---GCDTDVVAASALL 222
Query: 360 D---------EAMKMVEEMPMKPNSIVWGCLMGAC 385
D E++++ + +P K NS+ W ++ C
Sbjct: 223 DMYAKGKRFVESLRVFQGIPEK-NSVSWSAIIAGC 256
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 128/381 (33%), Positives = 209/381 (54%), Gaps = 5/381 (1%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WN++I +++ E +A L + M R V D YT +L A GK +H +
Sbjct: 272 SWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMV 331
Query: 130 VKIGLQTNEYCETGFINLYCK--SGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARD 187
+K GL+ I++Y + +G A +F+ L SWN++I G +Q GL+ D
Sbjct: 332 IKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSED 391
Query: 188 AIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSL 247
A++ F +R D +L +C + LQLG Q+H K+ ++ + +SL
Sbjct: 392 AVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALA--TKSGFVSNEFVISSL 449
Query: 248 VDMYGKCGRMDLAYKVFATMDERNVS-SWTSLIVGYAMHGHVNEALECFWCMREAGVRPN 306
+ MY KCG ++ A K F + ++ + +W ++I+GYA HG +L+ F M V+ +
Sbjct: 450 IVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLD 509
Query: 307 YVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMV 366
+VTF +L+AC H G +QEG ++M+ VY I PR++HY VDLLGRAGL+++A +++
Sbjct: 510 HVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELI 569
Query: 367 EEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWK 426
E MP+ P+ +V +G C G +EM VA HL +EP + YV LS++Y++ W+
Sbjct: 570 ESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWE 629
Query: 427 EVERIRSSMKEGRLAKVPAYS 447
E ++ MKE + KVP +S
Sbjct: 630 EKASVKKMMKERGVKKVPGWS 650
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 117/260 (45%), Gaps = 24/260 (9%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WN +I YT +A L M R+G D Y+ +LK + +LG+QVH L
Sbjct: 68 SWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLV 127
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
+K G + N Y + +++Y K A F E +P SWNA+I G Q RD
Sbjct: 128 IKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQ---VRDIK 184
Query: 190 RVF-----------VNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAER 238
F V M FAP +T++ C L Q+H V K +
Sbjct: 185 TAFWLLGLMEMKAAVTMDAGTFAP-LLTLLDDPMFC------NLLKQVHAKVL--KLGLQ 235
Query: 239 TDILMWNSLVDMYGKCGRMDLAYKVFATM-DERNVSSWTSLIVGYAMHGHVNEALECFWC 297
+I + N+++ Y CG + A +VF + +++ SW S+I G++ H A E F
Sbjct: 236 HEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQ 295
Query: 298 MREAGVRPNYVTFVGVLSAC 317
M+ V + T+ G+LSAC
Sbjct: 296 MQRHWVETDIYTYTGLLSAC 315
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 119/269 (44%), Gaps = 22/269 (8%)
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGL 184
H +K G ++ Y ++ Y K G A M+FDE P SWN +I G + G
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 185 ARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMW 244
DA +F M+R G DG + L SV LG Q+H V K ++ +
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVI--KGGYECNVYVG 139
Query: 245 NSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCM----RE 300
+SLVDMY KC R++ A++ F + E N SW +LI G+ V + FW + +
Sbjct: 140 SSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFV---QVRDIKTAFWLLGLMEMK 196
Query: 301 AGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPR--LQHY----GCMVDLLG 354
A V + TF +L+ + + + +++K V+ + LQH M+
Sbjct: 197 AAVTMDAGTFAPLLT-------LLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYA 249
Query: 355 RAGLLDEAMKMVEEMPMKPNSIVWGCLMG 383
G + +A ++ + + + I W ++
Sbjct: 250 DCGSVSDAKRVFDGLGGSKDLISWNSMIA 278
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 127/378 (33%), Positives = 203/378 (53%), Gaps = 4/378 (1%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN +++ Y +++ + L + G+ D + V+ + A+ LGK +H V
Sbjct: 401 WNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVV 460
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
K L I+LY K G+ T A +F E D + +WNA+I + AI
Sbjct: 461 KTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIA 519
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDM 250
+F M F P +T+V+L AC + G L+ G +H Y + ++ + +L+DM
Sbjct: 520 LFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHR--YITETEHEMNLSLSAALIDM 577
Query: 251 YGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTF 310
Y KCG ++ + ++F ++++ W +I GY MHG V A+ F M E+ V+P TF
Sbjct: 578 YAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTF 637
Query: 311 VGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMP 370
+ +LSAC H G V++G+ F M Y + P L+HY C+VDLL R+G L+EA V MP
Sbjct: 638 LALLSACTHAGLVEQGKKLFLKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMP 696
Query: 371 MKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVER 430
P+ ++WG L+ +C T+G EMG +A+ A +P NDG Y++L+N+Y+ G W+E ER
Sbjct: 697 FSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAER 756
Query: 431 IRSSMKEGRLAKVPAYSL 448
R M+E + K +S+
Sbjct: 757 AREMMRESGVGKRAGHSV 774
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 116/254 (45%), Gaps = 11/254 (4%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
F WN+II+ + +L ML +G PD +T P+V+ A + +G VH L
Sbjct: 91 FLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGL 150
Query: 129 GVKIG-LQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARD 187
+K G N F+ Y K G A +VFDE PD + +W A+I G Q G +
Sbjct: 151 VLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEG 210
Query: 188 AIRVFVNMRRHGF---APDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMW 244
+ M G P+ T+ AC ++G L+ G LH + K + +
Sbjct: 211 GLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHG--FAVKNGLASSKFVQ 268
Query: 245 NSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVR 304
+S+ Y K G AY F + + ++ SWTS+I A G + E+ + FW M+ G+
Sbjct: 269 SSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMH 328
Query: 305 PNYVTFVGVLSACV 318
P+ GV+ +C+
Sbjct: 329 PD-----GVVISCL 337
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 160/362 (44%), Gaps = 46/362 (12%)
Query: 101 PDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMV 160
P+ TL +A A++ G+ +H VK GL ++++ ++ + Y KSG + A +
Sbjct: 228 PNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLS 287
Query: 161 FDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDL 220
F E D + SW ++I L++ G ++ +F M+ G PDGV + L + G + +
Sbjct: 288 FRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLV 347
Query: 221 QLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDER-NVSSWTSLI 279
G H V + D + NSL+ MY K + +A K+F + E N +W +++
Sbjct: 348 PQGKAFHGFVI--RHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTML 405
Query: 280 VGYA-MHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGR---CYFDMMKN 335
GY M HV + +E F ++ G+ + + V+S+C H G V G+ CY ++K
Sbjct: 406 KGYGKMKCHV-KCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCY--VVKT 462
Query: 336 VYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMP------------------------- 370
+T + ++DL G+ G L A +M E
Sbjct: 463 SLDLT--ISVVNSLIDLYGKMGDLTVAWRMFCEADTNVITWNAMIASYVHCEQSEKAIAL 520
Query: 371 --------MKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALE-PWNDGAYVVLSNIYAN 421
KP+SI L+ AC G++E G+ + +++ E N L ++YA
Sbjct: 521 FDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAK 580
Query: 422 KG 423
G
Sbjct: 581 CG 582
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 164/407 (40%), Gaps = 48/407 (11%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
F+W +II R + + M G+ PD + ++ + + + GK H
Sbjct: 297 FSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGF 356
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDE-NPDPKLGSWNAVIGGLSQGGLARD 187
++ + +++YCK + A +F + + +WN ++ G +
Sbjct: 357 VIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVK 416
Query: 188 AIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSL 247
I +F ++ G D + S+ S+C +G + LG LH Y K + I + NSL
Sbjct: 417 CIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLH--CYVVKTSLDLTISVVNSL 474
Query: 248 VDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNY 307
+D+YGK G + +A+++F D NV +W ++I Y +A+ F M +P+
Sbjct: 475 IDLYGKMGDLTVAWRMFCEAD-TNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSS 533
Query: 308 VTFVGVLSACVHGGKVQEG-----------------------------------RCYFDM 332
+T V +L ACV+ G ++ G R FD
Sbjct: 534 ITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDA 593
Query: 333 --MKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGN 390
K+ + YG D+ L D+ +EE +KP + L+ AC G
Sbjct: 594 GNQKDAVCWNVMISGYGMHGDVESAIALFDQ----MEESDVKPTGPTFLALLSACTHAGL 649
Query: 391 VEMGE--YVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSM 435
VE G+ ++ H ++P N Y L ++ + G +E E SM
Sbjct: 650 VEQGKKLFLKMHQYDVKP-NLKHYSCLVDLLSRSGNLEEAESTVMSM 695
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 141/340 (41%), Gaps = 42/340 (12%)
Query: 80 RLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEY 139
RL P + L L + DR+ I+ QS ++E ++ ++L + GL N +
Sbjct: 4 RLLKPNLVVTLRKLSSSSASYVDRHISVILCD---QSLSLESLRKHNALIITGGLSENIF 60
Query: 140 CETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGG-LSQGGLARDAIRVFVNMRRH 198
+ I+ Y G+ + VF + WN++I S G AR ++ F +M
Sbjct: 61 VASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYAR-SLCFFFSMLLS 119
Query: 199 GFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMD 258
G +PD T + SAC + +G +H V +R + + S V Y KCG +
Sbjct: 120 GQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDR-NTAVGASFVYFYSKCGFLQ 178
Query: 259 LAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGV---RPNYVTFVGVLS 315
A VF M +R+V +WT++I G+ +G L M AG +PN T
Sbjct: 179 DACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQ 238
Query: 316 ACVHGGKVQEGRCYFDM-MKNVYGITPRLQ-----------------------------H 345
AC + G ++EGRC +KN + +Q
Sbjct: 239 ACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFS 298
Query: 346 YGCMVDLLGRAGLLDEAMKMVEEMP---MKPNSIVWGCLM 382
+ ++ L R+G ++E+ M EM M P+ +V CL+
Sbjct: 299 WTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLI 338
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 116/292 (39%), Gaps = 17/292 (5%)
Query: 61 FLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIE 120
F E++ WN +I Y E A+ L M+ P TL +L A + ++E
Sbjct: 491 FCEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLE 550
Query: 121 LGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLS 180
G+ +H + + N I++Y K G +R +FD WN +I G
Sbjct: 551 RGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYG 610
Query: 181 QGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTD 240
G AI +F M P G T ++L SAC G ++ G +L ++ + +
Sbjct: 611 MHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDV--KPN 668
Query: 241 ILMWNSLVDMYGKCGRMDLAYKVFATMD-ERNVSSWTSLIVGYAMHGHVNEALECFWCMR 299
+ ++ LVD+ + G ++ A +M + W +L+ HG + M
Sbjct: 669 LKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIR----MA 724
Query: 300 EAGVRPN------YVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQH 345
E V + Y+ + SA GK +E +MM+ G+ R H
Sbjct: 725 ERAVASDPQNDGYYIMLANMYSA---AGKWEEAERAREMMRES-GVGKRAGH 772
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 139/413 (33%), Positives = 217/413 (52%), Gaps = 37/413 (8%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+W +I R AL + MLR G+ P + +L A +S G Q+H
Sbjct: 272 SWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTI 331
Query: 130 VKIGLQTNEYCETGFINLYC-------------------------------KSGEFTSAR 158
VK G ++ + I+ Y K+G AR
Sbjct: 332 VKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAR 391
Query: 159 MVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNM-RRHGFAPDGVTMVSLTSACGSV 217
VFD+ D + SWNA+I G +Q + A+ +F M PD +TMVS+ SA S+
Sbjct: 392 EVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSL 451
Query: 218 GDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVF---ATMDERNVSS 274
G L+ G + H + + ++ +++DMY KCG ++ A +F + +S
Sbjct: 452 GSLEEGKRAHDYLNFSTIPPNDNLTA--AIIDMYAKCGSIETALNIFHQTKNISSSTISP 509
Query: 275 WTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMK 334
W ++I G A HGH AL+ + ++ ++PN +TFVGVLSAC H G V+ G+ YF+ MK
Sbjct: 510 WNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMK 569
Query: 335 NVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMG 394
+ +GI P ++HYGCMVDLLG+AG L+EA +M+++MP+K + ++WG L+ A T+GNVE+
Sbjct: 570 SDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIA 629
Query: 395 EYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
E A L A++P + G V+LSN+YA+ G W++V +R M+ + A+S
Sbjct: 630 ELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVEWSRAFS 682
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 167/399 (41%), Gaps = 66/399 (16%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
++ +I+ Y + A+ L M G++ + TL V+ A I + + SL
Sbjct: 140 SYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLA 199
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
+K+ L+ + T +++YC AR +FDE P+ L +WN ++ G S+ GL A
Sbjct: 200 IKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAE 259
Query: 190 RVF-------------------------------VNMRRHGFAPDGVTMVSLTSACG-SV 217
+F M R G P V MV L SA SV
Sbjct: 260 ELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSV 319
Query: 218 GDLQLGLQLHTCV-----------------YHA------------KAAERTDILMWNSLV 248
G + GLQLH + ++A +A+ + I N+L+
Sbjct: 320 GSSK-GLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALI 378
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCM-REAGVRPNY 307
+ K G ++ A +VF ++++ SW ++I GYA AL F M + V+P+
Sbjct: 379 AGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDA 438
Query: 308 VTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVE 367
+T V V SA G ++EG+ D + N I P ++D+ + G ++ A+ +
Sbjct: 439 ITMVSVFSAISSLGSLEEGKRAHDYL-NFSTIPPNDNLTAAIIDMYAKCGSIETALNIFH 497
Query: 368 EMPMKPNSIV--WGCLMGACETYGNVEMGEYVAKHLQAL 404
+ +S + W ++ T+G+ ++ + LQ+L
Sbjct: 498 QTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSL 536
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 117/279 (41%), Gaps = 41/279 (14%)
Query: 110 LKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCK------------------- 150
L + S + G+Q+H +K GL +N Y +N+Y K
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDS 107
Query: 151 -------SGEFTSARM-----VFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRH 198
G S R+ +FD P+ S+ +I G +Q +A+ +F MR
Sbjct: 108 ASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNL 167
Query: 199 GFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMD 258
G + VT+ ++ SAC +G + L + K R + + +L+ MY C +
Sbjct: 168 GIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGR--VFVSTNLLHMYCLCLCLK 225
Query: 259 LAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACV 318
A K+F M ERN+ +W ++ GY+ G + +A E F + E + V++ ++ C+
Sbjct: 226 DARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDI----VSWGTMIDGCL 281
Query: 319 HGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAG 357
++ E Y+ M G+ P MVDLL +
Sbjct: 282 RKNQLDEALVYYTEMLRC-GMKPS---EVMMVDLLSASA 316
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 118/284 (41%), Gaps = 47/284 (16%)
Query: 207 MVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKC------------ 254
+VS +C S D+ G Q+H V K+ ++ + NS+++MY KC
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVL--KSGLDSNGYICNSVLNMYAKCRLLADAESVFRD 101
Query: 255 -GRMDLA------------------YKVFATMDERNVSSWTSLIVGYAMHGHVNEALECF 295
++D A K+F M ER+ S+T+LI GYA + +EA+E F
Sbjct: 102 HAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELF 161
Query: 296 WCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDM-----MKNVYGITPRLQHYGCMV 350
MR G+ N VT V+SAC H G + + R + ++ ++ L H C+
Sbjct: 162 REMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCL- 220
Query: 351 DLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHL--QALEPWN 408
L +A K+ +EMP + N + W ++ G +E E + + + + W
Sbjct: 221 -----CLCLKDARKLFDEMPER-NLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWG 274
Query: 409 DGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYSLTTNS 452
L ++ + E +R MK + V S + S
Sbjct: 275 TMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARS 318
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 203/384 (52%), Gaps = 3/384 (0%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKA-VCQSFAIELGKQVHSLG 129
WN +I Y E P AL M GV + T+ VL A + +E GK +H+
Sbjct: 414 WNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYI 473
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
V G +++E+ + I +Y K G+ +S++ +F+ + + +WNA++ + G + +
Sbjct: 474 VSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVL 533
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
++ MR G + D + SA + L+ G QLH K D ++N+ D
Sbjct: 534 KLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLA--VKLGFEHDSFIFNAAAD 591
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
MY KCG + K+ R++ SW LI HG+ E F M E G++P +VT
Sbjct: 592 MYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVT 651
Query: 310 FVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
FV +L+AC HGG V +G Y+DM+ +G+ P ++H C++DLLGR+G L EA + +M
Sbjct: 652 FVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKM 711
Query: 370 PMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVE 429
PMKPN +VW L+ +C+ +GN++ G A++L LEP +D YV+ SN++A G W++VE
Sbjct: 712 PMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVE 771
Query: 430 RIRSSMKEGRLAKVPAYSLTTNSD 453
+R M + K A S D
Sbjct: 772 NVRKQMGFKNIKKKQACSWVKLKD 795
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 176/405 (43%), Gaps = 42/405 (10%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
+WN+++ + +AL L M+ +G + T L A E G+ +H L
Sbjct: 311 ISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGL 370
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
V GL N+ +++Y K GE + +R V + P + +WNA+IGG ++ A
Sbjct: 371 VVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKA 430
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGD-LQLGLQLHTCVYHAKAAERTDILMWNSL 247
+ F MR G + + +T+VS+ SAC GD L+ G LH Y A +D + NSL
Sbjct: 431 LAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHA--YIVSAGFESDEHVKNSL 488
Query: 248 VDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNY 307
+ MY KCG + + +F +D RN+ +W +++ A HGH E L+ MR GV +
Sbjct: 489 ITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQ 548
Query: 308 VTFVGVLSACVHGGKVQEGR---------------CYFDMMKNVY--------------- 337
+F LSA ++EG+ F+ ++Y
Sbjct: 549 FSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPP 608
Query: 338 GITPRLQHYGCMVDLLGRAGLLDEAMKMVE---EMPMKPNSIVWGCLMGACETYGNVEMG 394
+ L + ++ LGR G +E EM +KP + + L+ AC G V+ G
Sbjct: 609 SVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKG 668
Query: 395 ----EYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSM 435
+ +A+ LEP + V+ ++ G E E S M
Sbjct: 669 LAYYDMIARDF-GLEPAIEHCICVI-DLLGRSGRLAEAETFISKM 711
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 149/322 (46%), Gaps = 17/322 (5%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAI-ELGKQVHSL 128
+WN ++ R+ + M G+ P + + ++ A +S ++ G QVH
Sbjct: 8 SWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGF 67
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
K GL ++ Y T ++LY G + +R VF+E PD + SW +++ G S G +
Sbjct: 68 VAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEV 127
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
I ++ MR G + +M + S+CG + D LG Q+ V K+ + + + NSL+
Sbjct: 128 IDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQV--VKSGLESKLAVENSLI 185
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYV 308
M G G +D A +F M ER+ SW S+ YA +GH+ E+ F MR N
Sbjct: 186 SMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNST 245
Query: 309 TFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRL--QHYGCMVDLLGR----AGLLDEA 362
T +LS H + GR ++G+ ++ C+ + L R AG EA
Sbjct: 246 TVSTLLSVLGHVDHQKWGR-------GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 298
Query: 363 MKMVEEMPMKPNSIVWGCLMGA 384
+ ++MP K + I W LM +
Sbjct: 299 NLVFKQMPTK-DLISWNSLMAS 319
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 144/315 (45%), Gaps = 4/315 (1%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+W +++ Y+ P + ++ M GV + ++ +V+ + LG+Q+
Sbjct: 110 SWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQV 169
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
VK GL++ E I++ G A +FD+ + SWN++ +Q G ++
Sbjct: 170 VKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESF 229
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
R+F MRR + T+ +L S G V + G +H V K + + + N+L+
Sbjct: 230 RIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLV--VKMGFDSVVCVCNTLLR 287
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
MY GR A VF M +++ SW SL+ + G +AL M +G NYVT
Sbjct: 288 MYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVT 347
Query: 310 FVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
F L+AC ++GR ++ V G+ +V + G+ G + E+ +++ +M
Sbjct: 348 FTSALAACFTPDFFEKGRILHGLVV-VSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM 406
Query: 370 PMKPNSIVWGCLMGA 384
P + + + W L+G
Sbjct: 407 P-RRDVVAWNALIGG 420
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 203/384 (52%), Gaps = 3/384 (0%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKA-VCQSFAIELGKQVHSLG 129
WN +I Y E P AL M GV + T+ VL A + +E GK +H+
Sbjct: 431 WNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYI 490
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
V G +++E+ + I +Y K G+ +S++ +F+ + + +WNA++ + G + +
Sbjct: 491 VSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVL 550
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
++ MR G + D + SA + L+ G QLH K D ++N+ D
Sbjct: 551 KLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLA--VKLGFEHDSFIFNAAAD 608
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
MY KCG + K+ R++ SW LI HG+ E F M E G++P +VT
Sbjct: 609 MYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVT 668
Query: 310 FVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
FV +L+AC HGG V +G Y+DM+ +G+ P ++H C++DLLGR+G L EA + +M
Sbjct: 669 FVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKM 728
Query: 370 PMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVE 429
PMKPN +VW L+ +C+ +GN++ G A++L LEP +D YV+ SN++A G W++VE
Sbjct: 729 PMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVE 788
Query: 430 RIRSSMKEGRLAKVPAYSLTTNSD 453
+R M + K A S D
Sbjct: 789 NVRKQMGFKNIKKKQACSWVKLKD 812
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 176/405 (43%), Gaps = 42/405 (10%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
+WN+++ + +AL L M+ +G + T L A E G+ +H L
Sbjct: 328 ISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGL 387
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
V GL N+ +++Y K GE + +R V + P + +WNA+IGG ++ A
Sbjct: 388 VVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKA 447
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGD-LQLGLQLHTCVYHAKAAERTDILMWNSL 247
+ F MR G + + +T+VS+ SAC GD L+ G LH Y A +D + NSL
Sbjct: 448 LAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHA--YIVSAGFESDEHVKNSL 505
Query: 248 VDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNY 307
+ MY KCG + + +F +D RN+ +W +++ A HGH E L+ MR GV +
Sbjct: 506 ITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQ 565
Query: 308 VTFVGVLSACVHGGKVQEGR---------------CYFDMMKNVY--------------- 337
+F LSA ++EG+ F+ ++Y
Sbjct: 566 FSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPP 625
Query: 338 GITPRLQHYGCMVDLLGRAGLLDEAMKMVE---EMPMKPNSIVWGCLMGACETYGNVEMG 394
+ L + ++ LGR G +E EM +KP + + L+ AC G V+ G
Sbjct: 626 SVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKG 685
Query: 395 ----EYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSM 435
+ +A+ LEP + V+ ++ G E E S M
Sbjct: 686 LAYYDMIARDF-GLEPAIEHCICVI-DLLGRSGRLAEAETFISKM 728
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 149/322 (46%), Gaps = 17/322 (5%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAI-ELGKQVHSL 128
+WN ++ R+ + M G+ P + + ++ A +S ++ G QVH
Sbjct: 25 SWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGF 84
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
K GL ++ Y T ++LY G + +R VF+E PD + SW +++ G S G +
Sbjct: 85 VAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEV 144
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
I ++ MR G + +M + S+CG + D LG Q+ V K+ + + + NSL+
Sbjct: 145 IDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQV--VKSGLESKLAVENSLI 202
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYV 308
M G G +D A +F M ER+ SW S+ YA +GH+ E+ F MR N
Sbjct: 203 SMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNST 262
Query: 309 TFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRL--QHYGCMVDLLGR----AGLLDEA 362
T +LS H + GR ++G+ ++ C+ + L R AG EA
Sbjct: 263 TVSTLLSVLGHVDHQKWGR-------GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 315
Query: 363 MKMVEEMPMKPNSIVWGCLMGA 384
+ ++MP K + I W LM +
Sbjct: 316 NLVFKQMPTK-DLISWNSLMAS 336
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 144/315 (45%), Gaps = 4/315 (1%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+W +++ Y+ P + ++ M GV + ++ +V+ + LG+Q+
Sbjct: 127 SWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQV 186
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
VK GL++ E I++ G A +FD+ + SWN++ +Q G ++
Sbjct: 187 VKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESF 246
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
R+F MRR + T+ +L S G V + G +H V K + + + N+L+
Sbjct: 247 RIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLV--VKMGFDSVVCVCNTLLR 304
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
MY GR A VF M +++ SW SL+ + G +AL M +G NYVT
Sbjct: 305 MYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVT 364
Query: 310 FVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
F L+AC ++GR ++ V G+ +V + G+ G + E+ +++ +M
Sbjct: 365 FTSALAACFTPDFFEKGRILHGLVV-VSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM 423
Query: 370 PMKPNSIVWGCLMGA 384
P + + + W L+G
Sbjct: 424 P-RRDVVAWNALIGG 437
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 127/249 (51%), Gaps = 9/249 (3%)
Query: 147 LYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVT 206
+Y K G AR +FD P SWN ++ G+ + GL + + F M G P
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 207 MVSLTSACGSVGDL-QLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFA 265
+ SL +ACG G + + G+Q+H V AK+ +D+ + +++ +YG G + + KVF
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFV--AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFE 118
Query: 266 TMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQE 325
M +RNV SWTSL+VGY+ G E ++ + MR GV N + V+S+C G +++
Sbjct: 119 EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKD 175
Query: 326 GRCYFDMMKNVY--GITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMG 383
++ V G+ +L ++ +LG G +D A + ++M + ++I W +
Sbjct: 176 ESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSER-DTISWNSIAA 234
Query: 384 ACETYGNVE 392
A G++E
Sbjct: 235 AYAQNGHIE 243
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 238 bits (608), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 134/396 (33%), Positives = 214/396 (54%), Gaps = 15/396 (3%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLR-AGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
WN +I Y++ E + AL L + M AG+L + T+ V+ A +S A + +H
Sbjct: 372 WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 431
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
VK GL + + + +++Y + G+ A +F + D L +WN +I G DA+
Sbjct: 432 VKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDAL 491
Query: 190 RVFVNMR-----------RHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAER 238
+ M+ R P+ +T++++ +C ++ L G ++H Y K
Sbjct: 492 LLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHA--YAIKNNLA 549
Query: 239 TDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCM 298
TD+ + ++LVDMY KCG + ++ KVF + ++NV +W +I+ Y MHG+ EA++ M
Sbjct: 550 TDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMM 609
Query: 299 REAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGL 358
GV+PN VTF+ V +AC H G V EG F +MK YG+ P HY C+VDLLGRAG
Sbjct: 610 MVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGR 669
Query: 359 LDEAMKMVEEMPMKPNSI-VWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSN 417
+ EA +++ MP N W L+GA + N+E+GE A++L LEP YV+L+N
Sbjct: 670 IKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLAN 729
Query: 418 IYANKGMWKEVERIRSSMKEGRLAKVPAYSLTTNSD 453
IY++ G+W + +R +MKE + K P S + D
Sbjct: 730 IYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGD 765
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 188/399 (47%), Gaps = 29/399 (7%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN ++ + E AL M+ GV PD +T+ VL A + GK++H+ +
Sbjct: 270 WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL 329
Query: 131 KIG-LQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
K G L N + + +++YC + S R VFD D K+G WNA+I G SQ ++A+
Sbjct: 330 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEAL 389
Query: 190 RVFVNMRRH-GFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
+F+ M G + TM + AC G +H V K D + N+L+
Sbjct: 390 LLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV--VKRGLDRDRFVQNTLM 447
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMR--------- 299
DMY + G++D+A ++F M++R++ +W ++I GY H +AL M+
Sbjct: 448 DMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKG 507
Query: 300 --EAGVRPNYVTFVGVLSACVHGGKVQEGR-CYFDMMKNVYGITPRLQHYGCMVDLLGRA 356
++PN +T + +L +C + +G+ + +KN + + +VD+ +
Sbjct: 508 ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN--NLATDVAVGSALVDMYAKC 565
Query: 357 GLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHL--QALEPWNDGAYVV 414
G L + K+ +++P K N I W ++ A +GN + + + + Q ++P N+ ++
Sbjct: 566 GCLQMSRKVFDQIPQK-NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKP-NEVTFIS 623
Query: 415 LSNIYANKGMWKEVERIRSSMKEGRLAKVPAYSLTTNSD 453
+ ++ GM E RI MK P Y + +SD
Sbjct: 624 VFAACSHSGMVDEGLRIFYVMK-------PDYGVEPSSD 655
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 130/271 (47%), Gaps = 7/271 (2%)
Query: 61 FLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIE 120
F+ + +P W +++R R R A+ +V M+ G+ PD Y P +LKAV +E
Sbjct: 55 FISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDME 114
Query: 121 LGKQVHSLGVKIGLQTNEY-CETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGL 179
LGKQ+H+ K G + +NLY K G+F + VFD + SWN++I L
Sbjct: 115 LGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSL 174
Query: 180 SQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSV---GDLQLGLQLHTCVYHAKAA 236
A+ F M P T+VS+ +AC ++ L +G Q+H Y +
Sbjct: 175 CSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHA--YGLRKG 232
Query: 237 ERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFW 296
E ++ N+LV MYGK G++ + + + R++ +W +++ + + EALE
Sbjct: 233 ELNSFII-NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLR 291
Query: 297 CMREAGVRPNYVTFVGVLSACVHGGKVQEGR 327
M GV P+ T VL AC H ++ G+
Sbjct: 292 EMVLEGVEPDEFTISSVLPACSHLEMLRTGK 322
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 145/318 (45%), Gaps = 10/318 (3%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIE----LGKQV 125
+WN++I E AL ML V P +TL V+ A C + + +GKQV
Sbjct: 166 SWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTA-CSNLPMPEGLMMGKQV 224
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLA 185
H+ G++ G + N + + +Y K G+ S++++ L +WN V+ L Q
Sbjct: 225 HAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQL 283
Query: 186 RDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWN 245
+A+ M G PD T+ S+ AC + L+ G +LH + + + +
Sbjct: 284 LEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS-FVGS 342
Query: 246 SLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMRE-AGVR 304
+LVDMY C ++ +VF M +R + W ++I GY+ + H EAL F M E AG+
Sbjct: 343 ALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLL 402
Query: 305 PNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMK 364
N T GV+ ACV G + G+ ++D+ R G +D AM+
Sbjct: 403 ANSTTMAGVVPACVRSGAFSRKEAIHGFVVK-RGLDRDRFVQNTLMDMYSRLGKIDIAMR 461
Query: 365 MVEEMPMKPNSIVWGCLM 382
+ +M + + + W ++
Sbjct: 462 IFGKMEDR-DLVTWNTMI 478
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 238 bits (607), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 144/404 (35%), Positives = 214/404 (52%), Gaps = 24/404 (5%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLP--DRYTLPIVL---KAVCQSFAI 119
+P F +N +++C P +++R+ L + T VL S A+
Sbjct: 72 HPDKFLFNTLLKC----SKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSAL 127
Query: 120 ELGKQVHSLGVKIG-LQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGG 178
+G+ VH + K+G L +E T ++ Y K+G+ AR VFDE P+ +WNA+IGG
Sbjct: 128 RVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGG 187
Query: 179 L--SQGGLARDAIRVFVNMRR-----HGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVY 231
+ +A + V RR G P TMV + SA G L++G +H +
Sbjct: 188 YCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIE 247
Query: 232 HAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEA 291
D+ + +LVDMY KCG ++ A+ VF M +NV +WTS+ G A++G NE
Sbjct: 248 KLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNET 307
Query: 292 LECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVD 351
M E+G++PN +TF +LSA H G V+EG F MK +G+TP ++HYGC+VD
Sbjct: 308 PNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVD 367
Query: 352 LLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDG- 410
LLG+AG + EA + + MP+KP++I+ L AC YG MGE + K L +E ++
Sbjct: 368 LLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKL 427
Query: 411 ------AYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYSL 448
YV LSN+ A+KG W EVE++R MKE R+ P YS
Sbjct: 428 SGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSF 471
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 238 bits (606), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 134/375 (35%), Positives = 194/375 (51%), Gaps = 4/375 (1%)
Query: 70 NWNNIIRCYTR-LEAPRNALRLHVLMLRAG-VLPDRYTLPIVLKAVCQSFAIELGKQVHS 127
+W +I Y + A+ L M+ G V P+ +T KA +GKQV
Sbjct: 338 SWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLG 397
Query: 128 LGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARD 187
K GL +N I+++ KS A+ F+ + L S+N + G +
Sbjct: 398 QAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQ 457
Query: 188 AIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSL 247
A ++ + T SL S +VG ++ G Q+H+ V K + + N+L
Sbjct: 458 AFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQV--VKLGLSCNQPVCNAL 515
Query: 248 VDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNY 307
+ MY KCG +D A +VF M+ RNV SWTS+I G+A HG LE F M E GV+PN
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 308 VTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVE 367
VT+V +LSAC H G V EG +F+ M + I P+++HY CMVDLL RAGLL +A + +
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635
Query: 368 EMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKE 427
MP + + +VW +GAC + N E+G+ A+ + L+P AY+ LSNIYA G W+E
Sbjct: 636 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEE 695
Query: 428 VERIRSSMKEGRLAK 442
+R MKE L K
Sbjct: 696 STEMRRKMKERNLVK 710
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 152/312 (48%), Gaps = 16/312 (5%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+W+ ++ CY +A+++ V L G++P+ Y V++A S + +G+
Sbjct: 133 SWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFL 192
Query: 130 VKIGLQTNEYC-ETGFINLYCK-SGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARD 187
+K G ++ C I+++ K F +A VFD+ + + +W +I Q G R+
Sbjct: 193 MKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPRE 252
Query: 188 AIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSL 247
AIR F++M GF D T+ S+ SAC + +L LG QLH+ + + + SL
Sbjct: 253 AIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC----SL 308
Query: 248 VDMYGKC---GRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHV-NEALECFWCMREAG- 302
VDMY KC G +D KVF M++ +V SWT+LI GY + ++ EA+ F M G
Sbjct: 309 VDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGH 368
Query: 303 VRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVY--GITPRLQHYGCMVDLLGRAGLLD 360
V PN+ TF AC G + + R ++ + G+ ++ + ++ ++
Sbjct: 369 VEPNHFTFSSAFKAC---GNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRME 425
Query: 361 EAMKMVEEMPMK 372
+A + E + K
Sbjct: 426 DAQRAFESLSEK 437
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 146/359 (40%), Gaps = 52/359 (14%)
Query: 85 RNALRLHVLMLRAGVLP-DRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETG 143
R A+ LM R G+ P D T +LK+ ++ LGK VH+ ++ ++ +
Sbjct: 43 RGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNS 102
Query: 144 FINLYCKSGEFTSARMVFD---ENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGF 200
I+LY KSG+ A VF+ + SW+A++ G DAI+VFV G
Sbjct: 103 LISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL 162
Query: 201 APDGVTMVSLTSACGS-----VGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKC- 254
P+ ++ AC + VG + LG + T + +D+ + SL+DM+ K
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFE------SDVCVGCSLIDMFVKGE 216
Query: 255 GRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVL 314
+ AYKVF M E NV +WT +I G EA+ F M +G + T V
Sbjct: 217 NSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVF 276
Query: 315 SAC----------------VHGGKVQEGRCYF-DM---------MKNVYGITPRLQHYGC 348
SAC + G V + C DM + + + R++ +
Sbjct: 277 SACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSV 336
Query: 349 M------VDLLGRAGLLDEAMKMVEEM----PMKPNSIVWGCLMGACETYGNVEMGEYV 397
M + L EA+ + EM ++PN + AC + +G+ V
Sbjct: 337 MSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQV 395
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 238 bits (606), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 140/442 (31%), Positives = 227/442 (51%), Gaps = 40/442 (9%)
Query: 47 HQLNQVYAHILRTHFLESN--PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRY 104
+Q+ Q++ +L ++ L ++ +N +IR Y + +L L ML + V P+
Sbjct: 28 NQIKQIHTVLLTSNALVASRWKTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNL 87
Query: 105 TLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDEN 164
T P ++KA C SF++ G +H +K G + + +T F+ Y + G+ S+R +FD+
Sbjct: 88 TFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDI 147
Query: 165 PDP-------------------------------KLGSWNAVIGGLSQGGLARDAIRVFV 193
+P + SW VI G S+ GL A+ VF
Sbjct: 148 LNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFG 207
Query: 194 NM---RRHGFAPDGVTMVSLTSACGSV--GDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
M R P+ T VS+ S+C + G ++LG Q+H V + T + +L+
Sbjct: 208 EMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGT--ALL 265
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYV 308
DMYGK G +++A +F + ++ V +W ++I A +G +ALE F M+ + V PN +
Sbjct: 266 DMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGI 325
Query: 309 TFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEE 368
T + +L+AC V G F + + Y I P +HYGC+VDL+GRAGLL +A ++
Sbjct: 326 TLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQS 385
Query: 369 MPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEV 428
+P +P++ V G L+GAC+ + N E+G V K L L+P + G YV LS A W E
Sbjct: 386 LPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEA 445
Query: 429 ERIRSSMKEGRLAKVPAYSLTT 450
E++R +M E + K+PAYS+ T
Sbjct: 446 EKMRKAMIEAGIRKIPAYSVLT 467
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 238 bits (606), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 127/355 (35%), Positives = 196/355 (55%), Gaps = 2/355 (0%)
Query: 82 EAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCE 141
E + LRL LM R V P+ T L A S I G+Q+H+L K G+++ E
Sbjct: 235 ELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIE 294
Query: 142 TGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFA 201
+ +++Y K G A +F+ + S ++ GL+Q G +AI+ F+ M + G
Sbjct: 295 SALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVE 354
Query: 202 PDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAY 261
D + ++ L LG QLH+ V K + T + N L++MY KCG + +
Sbjct: 355 IDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNT--FVNNGLINMYSKCGDLTDSQ 412
Query: 262 KVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGG 321
VF M +RN SW S+I +A HGH AL+ + M V+P VTF+ +L AC H G
Sbjct: 413 TVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVG 472
Query: 322 KVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCL 381
+ +GR + MK V+GI PR +HY C++D+LGRAGLL EA ++ +P+KP+ +W L
Sbjct: 473 LIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQAL 532
Query: 382 MGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMK 436
+GAC +G+ E+GEY A+ L P + A+++++NIY+++G WKE + MK
Sbjct: 533 LGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMK 587
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 160/371 (43%), Gaps = 41/371 (11%)
Query: 102 DRYTLPIVLKAVCQSFAIEL-GKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMV 160
D TL IVL +VC + L K +H+L + G I Y K G S R V
Sbjct: 154 DHATLTIVL-SVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGV 212
Query: 161 FDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDL 220
FD + + AVI GL + L D +R+F MRR P+ VT +S +AC +
Sbjct: 213 FDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRI 272
Query: 221 QLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIV 280
G Q+H ++ K +++ + ++L+DMY KCG ++ A+ +F + E + S T ++V
Sbjct: 273 VEGQQIHALLW--KYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILV 330
Query: 281 GYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMM------- 333
G A +G EA++ F M +AGV + VL + G+ ++
Sbjct: 331 GLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSG 390
Query: 334 ---------------------KNVYGITPRLQH--YGCMVDLLGRAGLLDEAMKMVEEM- 369
+ V+ P+ + + M+ R G A+K+ EEM
Sbjct: 391 NTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMT 450
Query: 370 --PMKPNSIVWGCLMGACETYGNVEMGEYV---AKHLQALEPWNDGAYVVLSNIYANKGM 424
+KP + + L+ AC G ++ G + K + +EP + Y + ++ G+
Sbjct: 451 TLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTE-HYTCIIDMLGRAGL 509
Query: 425 WKEVERIRSSM 435
KE + S+
Sbjct: 510 LKEAKSFIDSL 520
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 115/267 (43%), Gaps = 18/267 (6%)
Query: 144 FINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRH----G 199
++LY K G+ A +FDE P + S N V G + R+ FV ++R G
Sbjct: 96 LLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRN---RETESGFVLLKRMLGSGG 152
Query: 200 FAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKA---AERTDILMWNSLVDMYGKCGR 256
F D T+ + S C + L T + HA A +I + N L+ Y KCG
Sbjct: 153 F--DHATLTIVLSVCDTP-----EFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGC 205
Query: 257 MDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSA 316
VF M RNV + T++I G + + L F MR V PN VT++ L+A
Sbjct: 206 SVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAA 265
Query: 317 CVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSI 376
C ++ EG+ ++ YGI L ++D+ + G +++A + E
Sbjct: 266 CSGSQRIVEGQQIHALLWK-YGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVS 324
Query: 377 VWGCLMGACETYGNVEMGEYVAKHLQA 403
+ L+G + E ++ + LQA
Sbjct: 325 MTVILVGLAQNGSEEEAIQFFIRMLQA 351
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 238 bits (606), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 125/379 (32%), Positives = 205/379 (54%), Gaps = 7/379 (1%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+W +I + + + A+ L M R GV P+ +T ++L A+ + +VH+
Sbjct: 364 SWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL----PVISPSEVHAQV 419
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
VK + + T ++ Y K G+ A VF D + +W+A++ G +Q G AI
Sbjct: 420 VKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAI 479
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSV-GDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
++F + + G P+ T S+ + C + + G Q H + K+ + + + ++L+
Sbjct: 480 KMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHG--FAIKSRLDSSLCVSSALL 537
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYV 308
MY K G ++ A +VF E+++ SW S+I GYA HG +AL+ F M++ V+ + V
Sbjct: 538 TMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGV 597
Query: 309 TFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEE 368
TF+GV +AC H G V+EG YFD+M I P +H CMVDL RAG L++AMK++E
Sbjct: 598 TFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIEN 657
Query: 369 MPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEV 428
MP S +W ++ AC + E+G A+ + A++P + AYV+LSN+YA G W+E
Sbjct: 658 MPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQER 717
Query: 429 ERIRSSMKEGRLAKVPAYS 447
++R M E + K P YS
Sbjct: 718 AKVRKLMNERNVKKEPGYS 736
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 172/409 (42%), Gaps = 48/409 (11%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
W +I Y R L L + M G P+ +T L + + G QVH++ V
Sbjct: 162 WTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVV 221
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
K GL INLY K G AR++FD+ + +WN++I G + GL +A+
Sbjct: 222 KNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALG 281
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDM 250
+F +MR + + S+ C ++ +L+ QLH V K D + +L+
Sbjct: 282 MFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSV--VKYGFLFDQNIRTALMVA 339
Query: 251 YGKCGRMDLAYKVFATMD-ERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
Y KC M A ++F + NV SWT++I G+ + EA++ F M+ GVRPN T
Sbjct: 340 YSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFT 399
Query: 310 FVGVLSAC-------VHG------------------------GKVQEGRCYFDMMKNVYG 338
+ +L+A VH GKV+E F G
Sbjct: 400 YSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFS------G 453
Query: 339 ITPR-LQHYGCMVDLLGRAGLLDEAMKMVEEMP---MKPNSIVWGCLMGACETYGNVEMG 394
I + + + M+ + G + A+KM E+ +KPN + ++ C N MG
Sbjct: 454 IDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAA-TNASMG 512
Query: 395 EYVAKHLQALEPWNDGAYVVLS---NIYANKGMWKEVERIRSSMKEGRL 440
+ H A++ D + V S +YA KG + E + +E L
Sbjct: 513 QGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDL 561
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 117/243 (48%), Gaps = 4/243 (1%)
Query: 78 YTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIEL-GKQVHSLGVKIGLQT 136
++R + A RL + + R G+ D VLK V + EL G+Q+H +K G
Sbjct: 68 FSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLK-VSATLCDELFGRQLHCQCIKFGFLD 126
Query: 137 NEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMR 196
+ T ++ Y K F R VFDE + + +W +I G ++ + + + +F+ M+
Sbjct: 127 DVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQ 186
Query: 197 RHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGR 256
G P+ T + G GLQ+HT V K I + NSL+++Y KCG
Sbjct: 187 NEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVV--VKNGLDKTIPVSNSLINLYLKCGN 244
Query: 257 MDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSA 316
+ A +F + ++V +W S+I GYA +G EAL F+ MR VR + +F V+
Sbjct: 245 VRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKL 304
Query: 317 CVH 319
C +
Sbjct: 305 CAN 307
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 116/244 (47%), Gaps = 12/244 (4%)
Query: 145 INLYC----KSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGF 200
+ +YC S +A +FD++P S+ +++ G S+ G ++A R+F+N+ R G
Sbjct: 30 VRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGM 89
Query: 201 APDGVTMVSLTSACGSVGDLQLGLQLH-TCVYHAKAAERTDILMWNSLVDMYGKCGRMDL 259
D S+ ++ D G QLH C+ K D+ + SLVD Y K
Sbjct: 90 EMDCSIFSSVLKVSATLCDELFGRQLHCQCI---KFGFLDDVSVGTSLVDTYMKGSNFKD 146
Query: 260 AYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVH 319
KVF M ERNV +WT+LI GYA + +E L F M+ G +PN TF L
Sbjct: 147 GRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAE 206
Query: 320 GGKVQEG-RCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVW 378
G G + + ++KN G+ + +++L + G + +A + ++ +K + + W
Sbjct: 207 EGVGGRGLQVHTVVVKN--GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTW 263
Query: 379 GCLM 382
++
Sbjct: 264 NSMI 267
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 144/385 (37%), Positives = 215/385 (55%), Gaps = 16/385 (4%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+W II +TR + AL M V P+ T VL + + + LGK +H L
Sbjct: 174 SWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLI 230
Query: 130 VK----IGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLA 185
+K I L+T I++Y K + + A VF E SWN++I GL +
Sbjct: 231 LKRASLISLETG----NALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERS 286
Query: 186 RDAIRVFVNMR-RHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMW 244
++AI +F M+ G PDG + S+ SAC S+G + G +H Y A + D +
Sbjct: 287 KEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHE--YILTAGIKWDTHIG 344
Query: 245 NSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVR 304
++VDMY KCG ++ A ++F + +NV +W +L+ G A+HGH E+L F M + G +
Sbjct: 345 TAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFK 404
Query: 305 PNYVTFVGVLSACVHGGKVQEGRCYFDMMKN-VYGITPRLQHYGCMVDLLGRAGLLDEAM 363
PN VTF+ L+AC H G V EGR YF MK+ Y + P+L+HYGCM+DLL RAGLLDEA+
Sbjct: 405 PNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEAL 464
Query: 364 KMVEEMPMKPNSIVWGCLMGACETYGNV-EMGEYVAKHLQALEPWNDGAYVVLSNIYANK 422
++V+ MP+KP+ + G ++ AC+ G + E+ + + +E + G YV+LSNI+A
Sbjct: 465 ELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAAN 524
Query: 423 GMWKEVERIRSSMKEGRLAKVPAYS 447
W +V RIR MK ++KVP S
Sbjct: 525 RRWDDVARIRRLMKVKGISKVPGSS 549
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 197/440 (44%), Gaps = 22/440 (5%)
Query: 5 FFQLGRRCYS------VSQRSITQTLLLDSANNPVTLIATQLCNCTHIHQLNQVYAHILR 58
+L RC S + + IT+ LL D + + + T L + V H +R
Sbjct: 9 LLELISRCSSLRVFKQIQTQLITRDLLRD--DLIINKVVTFLGKSADFASYSSVILHSIR 66
Query: 59 THFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFA 118
S + F++N ++ Y + PR + + + G PD +T P V KA +
Sbjct: 67 -----SVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSG 121
Query: 119 IELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGG 178
I GKQ+H + K+G + Y + ++ Y GE +A VF E P + SW +I G
Sbjct: 122 IREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITG 181
Query: 179 LSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAER 238
++ GL ++A+ F M P+ T V + + G VG L LG +H + K A
Sbjct: 182 FTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLIL--KRASL 236
Query: 239 TDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCM 298
+ N+L+DMY KC ++ A +VF +++++ SW S+I G EA++ F M
Sbjct: 237 ISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLM 296
Query: 299 R-EAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAG 357
+ +G++P+ VLSAC G V GR + + GI +VD+ + G
Sbjct: 297 QTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTA-GIKWDTHIGTAIVDMYAKCG 355
Query: 358 LLDEAMKMVEEMPMKPNSIVWGCLMGACETYGN-VEMGEYVAKHLQALEPWNDGAYVVLS 416
++ A+++ + K N W L+G +G+ +E Y + ++ N ++
Sbjct: 356 YIETALEIFNGIRSK-NVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAAL 414
Query: 417 NIYANKGMWKEVERIRSSMK 436
N + G+ E R MK
Sbjct: 415 NACCHTGLVDEGRRYFHKMK 434
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 210/383 (54%), Gaps = 9/383 (2%)
Query: 54 AHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAV 113
AH + + + +PF WN++I Y L +A+ L+ M GV PDR+T P VLKA
Sbjct: 146 AHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKAC 205
Query: 114 CQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWN 173
++++G+ +H VK G + Y + +Y K G+ AR VFD P SWN
Sbjct: 206 GGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWN 265
Query: 174 AVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHA 233
+++ G GL +A+ +F M ++G PD V+++S V + G QLH V
Sbjct: 266 SMLTGYLHHGLLHEALDIFRLMVQNGIEPDK---VAISSVLARVLSFKHGRQLHGWV--I 320
Query: 234 KAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALE 293
+ ++ + N+L+ +Y K G++ A +F M ER+ SW ++I + H + L+
Sbjct: 321 RRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAII---SAHSKNSNGLK 377
Query: 294 CFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLL 353
F M A +P+ +TFV VLS C + G V++G F +M YGI P+++HY CMV+L
Sbjct: 378 YFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLY 437
Query: 354 GRAGLLDEAMKM-VEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAY 412
GRAG+++EA M V+EM ++ VWG L+ AC +GN ++GE A+ L LEP N+ +
Sbjct: 438 GRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNF 497
Query: 413 VVLSNIYANKGMWKEVERIRSSM 435
+L IY+ ++VER+R M
Sbjct: 498 ELLIRIYSKAKRAEDVERVRQMM 520
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 173/381 (45%), Gaps = 14/381 (3%)
Query: 61 FLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSF-AI 119
F + +P P T+LEA + + + G+ + L C S AI
Sbjct: 49 FTKPSPTPLLIEKQSIHRTQLEALDSVITDLETSAQKGISLTEPEIFASLLETCYSLRAI 108
Query: 120 ELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDE--NPDPKLGSWNAVIG 177
+ G +VH L L+ N + + LY G A VFD D +WN++I
Sbjct: 109 DHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLIS 168
Query: 178 GLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAE 237
G ++ G DA+ ++ M G PD T + ACG +G +Q+G +H + K
Sbjct: 169 GYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDL--VKEGF 226
Query: 238 RTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWC 297
D+ + N+LV MY KCG + A VF + ++ SW S++ GY HG ++EAL+ F
Sbjct: 227 GYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRL 286
Query: 298 MREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAG 357
M + G+ P+ V VL+ + + GR + G+ L ++ L + G
Sbjct: 287 MVQNGIEPDKVAISSVLARVL---SFKHGRQLHGWVIR-RGMEWELSVANALIVLYSKRG 342
Query: 358 LLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDG-AYVVLS 416
L +A + ++M ++ +++ W ++ A N + + H +P DG +V +
Sbjct: 343 QLGQACFIFDQM-LERDTVSWNAIISAHSKNSN-GLKYFEQMHRANAKP--DGITFVSVL 398
Query: 417 NIYANKGMWKEVERIRSSMKE 437
++ AN GM ++ ER+ S M +
Sbjct: 399 SLCANTGMVEDGERLFSLMSK 419
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 145/419 (34%), Positives = 219/419 (52%), Gaps = 38/419 (9%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQ 124
+P ++N +I Y + AL+L+ M+ G+ PD YT+ +L I LGK
Sbjct: 194 HPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKG 253
Query: 125 VHSLGVKIG--LQTNEYCETGFINLY--CKS----------------------------- 151
VH + G +N +++Y CK
Sbjct: 254 VHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRL 313
Query: 152 GEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR-VFVNMR-RHGFAPDGVTMVS 209
G+ +A+ VFD+ P L SWN+++ G S+ G + +R +F M PD VTMVS
Sbjct: 314 GDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVS 373
Query: 210 LTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDE 269
L S + G+L G +H V + + D + ++L+DMY KCG ++ A+ VF T E
Sbjct: 374 LISGAANNGELSHGRWVHGLVIRLQL--KGDAFLSSALIDMYCKCGIIERAFMVFKTATE 431
Query: 270 RNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCY 329
++V+ WTS+I G A HG+ +AL+ F M+E GV PN VT + VL+AC H G V+EG
Sbjct: 432 KDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHV 491
Query: 330 FDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVE-EMPMKPNSIVWGCLMGACETY 388
F+ MK+ +G P +HYG +VDLL RAG ++EA +V+ +MPM+P+ +WG ++ AC
Sbjct: 492 FNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGG 551
Query: 389 GNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
++E E L LEP +G YV+LSNIYA G W ++ R +M+ + K YS
Sbjct: 552 EDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYS 610
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 181/422 (42%), Gaps = 84/422 (19%)
Query: 40 LCNCTHIHQLNQVYAHILRTH-----------------------------FLESNPAP-- 68
L NC +Q QV A I+R + FL P P
Sbjct: 41 LENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTPNPNV 100
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
F +N +I + + L+ M+R V PDR T ++KA SF E+ KQ+H
Sbjct: 101 FVYNTMISAVS--SSKNECFGLYSSMIRHRVSPDRQTFLYLMKA--SSFLSEV-KQIHCH 155
Query: 129 GVKIG-LQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARD 187
+ G L Y + Y + G F A VF P P + S+N +I G ++ G + +
Sbjct: 156 IIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLE 215
Query: 188 AIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSL 247
A++++ M G PD T++SL CG + D++LG +H + +++++ N+L
Sbjct: 216 ALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNAL 275
Query: 248 VDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECF----------W- 296
+DMY KC LA + F M ++++ SW +++VG+ G + A F W
Sbjct: 276 LDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWN 335
Query: 297 --------------CMRE--------AGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMK 334
+RE V+P+ VT V ++S + G++ GR
Sbjct: 336 SLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRW------ 389
Query: 335 NVYGITPRLQHYG------CMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETY 388
V+G+ RLQ G ++D+ + G+++ A MV + + + +W ++ +
Sbjct: 390 -VHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAF-MVFKTATEKDVALWTSMITGLAFH 447
Query: 389 GN 390
GN
Sbjct: 448 GN 449
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 137/405 (33%), Positives = 210/405 (51%), Gaps = 8/405 (1%)
Query: 49 LNQVYAHI--LRTHFLESNPAPFN----WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPD 102
L Q+Y + + F N P N W+ +I + + A+ L + M A V+P+
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347
Query: 103 RYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFD 162
+TL +L LG+Q+H L VK+G + Y I++Y K + +A +F
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFA 407
Query: 163 ENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQL 222
E SWN VI G G A +F R+ + VT S AC S+ + L
Sbjct: 408 ELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDL 467
Query: 223 GLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGY 282
G+Q+H A++ + + NSL+DMY KCG + A VF M+ +V+SW +LI GY
Sbjct: 468 GVQVHGLAIKTNNAKK--VAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGY 525
Query: 283 AMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPR 342
+ HG +AL M++ +PN +TF+GVLS C + G + +G+ F+ M +GI P
Sbjct: 526 STHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPC 585
Query: 343 LQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQ 402
L+HY CMV LLGR+G LD+AMK++E +P +P+ ++W ++ A N E A+ +
Sbjct: 586 LEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEIL 645
Query: 403 ALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
+ P ++ YV++SN+YA W V IR SMKE + K P S
Sbjct: 646 KINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLS 690
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 142/325 (43%), Gaps = 16/325 (4%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
W I+ CY ++L+L M AG +P+ YT LKA A + K VH +
Sbjct: 215 WAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQIL 274
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
K + G + LY + G+ + A VF+E P + W+ +I Q G +A+
Sbjct: 275 KTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVD 334
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDM 250
+F+ MR P+ T+ S+ + C LG QLH V K DI + N+L+D+
Sbjct: 335 LFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLV--VKVGFDLDIYVSNALIDV 392
Query: 251 YGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTF 310
Y KC +MD A K+FA + +N SW ++IVGY G +A F V VTF
Sbjct: 393 YAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTF 452
Query: 311 VGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQH------YGCMVDLLGRAGLLDEAMK 364
L AC + D+ V+G+ + + ++D+ + G + A
Sbjct: 453 SSALGACASLASM-------DLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQS 505
Query: 365 MVEEMPMKPNSIVWGCLMGACETYG 389
+ EM + W L+ T+G
Sbjct: 506 VFNEME-TIDVASWNALISGYSTHG 529
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 139/322 (43%), Gaps = 6/322 (1%)
Query: 83 APRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCET 142
A ++ + L+ + R G + + LK E+ +HS VK+G +N +
Sbjct: 126 ACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGA 185
Query: 143 GFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAP 202
IN Y G SAR VF+ + W ++ + G D++++ MR GF P
Sbjct: 186 ALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMP 245
Query: 203 DGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYK 262
+ T + A +G +H + K D + L+ +Y + G M A+K
Sbjct: 246 NNYTFDTALKASIGLGAFDFAKGVHGQIL--KTCYVLDPRVGVGLLQLYTQLGDMSDAFK 303
Query: 263 VFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGK 322
VF M + +V W+ +I + +G NEA++ F MREA V PN T +L+ C G
Sbjct: 304 VFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKC 363
Query: 323 VQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLM 382
G ++ V G + ++D+ + +D A+K+ E+ K N + W ++
Sbjct: 364 SGLGEQLHGLVVKV-GFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK-NEVSWNTVI 421
Query: 383 GACETYGNVEMGEYVAKHLQAL 404
E G E G+ + +AL
Sbjct: 422 VGYENLG--EGGKAFSMFREAL 441
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 117/263 (44%), Gaps = 10/263 (3%)
Query: 122 GKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQ 181
K +H +K G + + +N Y K+G A +FDE P+ N L+Q
Sbjct: 68 AKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERN----NVSFVTLAQ 123
Query: 182 GGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI 241
G +D I ++ + R G + S S+ ++ LH+ + K ++
Sbjct: 124 GYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPI--VKLGYDSNA 181
Query: 242 LMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREA 301
+ +L++ Y CG +D A VF + +++ W ++ Y +G+ ++L+ CMR A
Sbjct: 182 FVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMA 241
Query: 302 GVRPNYVTFVGVLSACVHGGKVQEGR-CYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLD 360
G PN TF L A + G + + ++K Y + PR+ ++ L + G +
Sbjct: 242 GFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGV--GLLQLYTQLGDMS 299
Query: 361 EAMKMVEEMPMKPNSIVWGCLMG 383
+A K+ EMP K + + W ++
Sbjct: 300 DAFKVFNEMP-KNDVVPWSFMIA 321
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 167/279 (59%), Gaps = 2/279 (0%)
Query: 169 LGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHT 228
L SWN +IG + + +A+ ++ M GF PD V++ S+ ACG L LG ++H
Sbjct: 274 LVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHG 333
Query: 229 CVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHV 288
+ K ++L+ N+L+DMY KCG ++ A VF M R+V SWT++I Y G
Sbjct: 334 YIERKKLI--PNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRG 391
Query: 289 NEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGC 348
+A+ F ++++G+ P+ + FV L+AC H G ++EGR F +M + Y ITPRL+H C
Sbjct: 392 CDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLAC 451
Query: 349 MVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWN 408
MVDLLGRAG + EA + +++M M+PN VWG L+GAC + + ++G A L L P
Sbjct: 452 MVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQ 511
Query: 409 DGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
G YV+LSNIYA G W+EV IR+ MK L K P S
Sbjct: 512 SGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGAS 550
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 121/291 (41%), Gaps = 25/291 (8%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WN +I Y + P A+ L+ M G PD ++ VL A + A+ LGK++H
Sbjct: 276 SWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYI 335
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
+ L N E I++Y K G AR VF+ + SW A+I G DA+
Sbjct: 336 ERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAV 395
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQ-LHTCVYHAKAAERTDILMWNSLV 248
+F ++ G PD + V+ +AC G L+ G H K R + L +V
Sbjct: 396 ALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLA--CMV 453
Query: 249 DMYGKCGRMDLAYKVFATMD-ERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNY 307
D+ G+ G++ AY+ M E N W +L+ +H
Sbjct: 454 DLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSD-------------------- 493
Query: 308 VTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGL 358
T +G+L+A E Y+ ++ N+Y R + + +++ GL
Sbjct: 494 -TDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGL 543
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 120/283 (42%), Gaps = 8/283 (2%)
Query: 123 KQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQG 182
+ VHS + L+ N + Y + SAR VFDE P+ + N +I
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 183 GLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDIL 242
G + ++VF M PD T + AC G + +G ++H K + +
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSA--TKVGLSSTLF 176
Query: 243 MWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAG 302
+ N LV MYGKCG + A V M R+V SW SL+VGYA + ++ALE M
Sbjct: 177 VGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVK 236
Query: 303 VRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEA 362
+ + T +L A E Y M G L + M+ + + + EA
Sbjct: 237 ISHDAGTMASLLPAV--SNTTTENVMYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMPVEA 293
Query: 363 MKMVEEMP---MKPNSIVWGCLMGACETYGNVEMGEYVAKHLQ 402
+++ M +P+++ ++ AC + +G+ + +++
Sbjct: 294 VELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIE 336
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 235 bits (600), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 122/343 (35%), Positives = 189/343 (55%), Gaps = 1/343 (0%)
Query: 102 DRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVF 161
D + I LKA AI LGK++H L + + I +Y K + A +VF
Sbjct: 279 DPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVF 338
Query: 162 DENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQ 221
+ + L +WN++I G +Q + +A + M GF P+ +T+ S+ C + +LQ
Sbjct: 339 RQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQ 398
Query: 222 LGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVG 281
G + H C + + ++WNSLVD+Y K G++ A +V M +R+ ++TSLI G
Sbjct: 399 HGKEFH-CYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDG 457
Query: 282 YAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITP 341
Y G AL F M +G++P++VT V VLSAC H V EG F M+ YGI P
Sbjct: 458 YGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRP 517
Query: 342 RLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHL 401
LQH+ CMVDL GRAG L +A ++ MP KP+ W L+ AC +GN ++G++ A+ L
Sbjct: 518 CLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKL 577
Query: 402 QALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVP 444
++P N G YV+++N+YA G W ++ +R+ M++ + K P
Sbjct: 578 LEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDP 620
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 149/361 (41%), Gaps = 47/361 (13%)
Query: 68 PFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHS 127
P WN +I Y + E + + M+ G+ PD +T P VLKA ++ + G+ VH
Sbjct: 109 PLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHG 168
Query: 128 LGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVI----------- 176
+++ Y I++Y + AR +FD + SWNAVI
Sbjct: 169 SIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSE 228
Query: 177 ------------------------GGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTS 212
GG Q G A+ + MR + D V M+
Sbjct: 229 AFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLK 288
Query: 213 ACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNV 272
AC +G ++LG ++H H+ ++ N+L+ MY KC + A VF +E ++
Sbjct: 289 ACSLIGAIRLGKEIHGLAIHSSYDGIDNVR--NTLITMYSKCKDLRHALIVFRQTEENSL 346
Query: 273 SSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGR---CY 329
+W S+I GYA EA M AG +PN +T +L C +Q G+ CY
Sbjct: 347 CTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCY 406
Query: 330 FDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYG 389
K T + +VD+ ++G + A K V ++ K + + + L+ + YG
Sbjct: 407 ILRRKCFKDYT---MLWNSLVDVYAKSGKI-VAAKQVSDLMSKRDEVTYTSLI---DGYG 459
Query: 390 N 390
N
Sbjct: 460 N 460
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 98/227 (43%), Gaps = 2/227 (0%)
Query: 109 VLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPK 168
+L A A G QVH+ + G++ + + Y A+ + + +
Sbjct: 49 LLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILH 108
Query: 169 LGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHT 228
WN +I ++ L + I + M G PD T S+ ACG D+ G +H
Sbjct: 109 PLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHG 168
Query: 229 CVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHV 288
+ ++ ++ + + N+L+ MY + M +A ++F M ER+ SW ++I YA G
Sbjct: 169 SI--EVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMW 226
Query: 289 NEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKN 335
+EA E F M +GV + +T+ + C+ G M+N
Sbjct: 227 SEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRN 273
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 233 bits (595), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/417 (31%), Positives = 213/417 (51%), Gaps = 34/417 (8%)
Query: 62 LESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIEL 121
++ N +N +I Y + AL + M+ +G+ D +T P V++A + ++L
Sbjct: 245 MDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQL 304
Query: 122 GKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAV------ 175
GKQVH+ ++ + + + ++LY K G+F AR +F++ P L SWNA+
Sbjct: 305 GKQVHAYVLRREDFSFHF-DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVS 363
Query: 176 -------------------------IGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSL 210
I GL++ G + +++F M+R GF P
Sbjct: 364 SGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGA 423
Query: 211 TSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDER 270
+C +G G Q H + K + + N+L+ MY KCG ++ A +VF TM
Sbjct: 424 IKSCAVLGAYCNGQQYHAQLL--KIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCL 481
Query: 271 NVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYF 330
+ SW +LI HGH EA++ + M + G+RP+ +T + VL+AC H G V +GR YF
Sbjct: 482 DSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYF 541
Query: 331 DMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGN 390
D M+ VY I P HY ++DLL R+G +A ++E +P KP + +W L+ C +GN
Sbjct: 542 DSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGN 601
Query: 391 VEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
+E+G A L L P +DG Y++LSN++A G W+EV R+R M++ + K A S
Sbjct: 602 MELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACS 658
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 149/388 (38%), Gaps = 73/388 (18%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELG-KQVHSLG 129
+N +I ++ +A+ L M G PD +T VL + E Q H+
Sbjct: 116 YNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAA 175
Query: 130 VKIGLQTNEYCETGFINLYCKSGE----FTSARMVFDE---------------------- 163
+K G +++Y K SAR VFDE
Sbjct: 176 LKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYF 235
Query: 164 ----------NPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSA 213
+ + KL ++NA+I G G ++A+ + M G D T S+ A
Sbjct: 236 DLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRA 295
Query: 214 CGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVS 273
C + G LQLG Q+H V E NSLV +Y KCG+ D A +F M +++
Sbjct: 296 CATAGLLQLGKQVHAYVLRR---EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLV 352
Query: 274 SWTSLIVGYAMHGHVNEA-------------------------------LECFWCMREAG 302
SW +L+ GY GH+ EA L+ F CM+ G
Sbjct: 353 SWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREG 412
Query: 303 VRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEA 362
P F G + +C G G+ Y + + G L ++ + + G+++EA
Sbjct: 413 FEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKI-GFDSSLSAGNALITMYAKCGVVEEA 471
Query: 363 MKMVEEMPMKPNSIVWGCLMGACETYGN 390
++ MP +S+ W L+ A +G+
Sbjct: 472 RQVFRTMPC-LDSVSWNALIAALGQHGH 498
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 165/412 (40%), Gaps = 88/412 (21%)
Query: 100 LPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARM 159
+ +RY + L + +++L + VH + G Q + I++YCKS E AR
Sbjct: 11 IANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQ 70
Query: 160 VFDENPDP-KLGS--------------------------------WNAVIGGLSQGGLAR 186
+FDE +P K+ +NA+I G S
Sbjct: 71 LFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGY 130
Query: 187 DAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLG-LQLHTCVYHAKAAERTDILMWN 245
AI +F M+ GF PD T S+ + V D + +Q H + A T + N
Sbjct: 131 SAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSV--SN 188
Query: 246 SLVDMYGKCGR----MDLAYKVFATMDERNVSSWTSLIVGYAMHGHVN------------ 289
+LV +Y KC + A KVF + E++ SWT+++ GY +G+ +
Sbjct: 189 ALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDN 248
Query: 290 --------------------EALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCY 329
EALE M +G+ + T+ V+ AC G +Q G
Sbjct: 249 MKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLG--- 305
Query: 330 FDMMKNVYGITPRLQHYG-----CMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGA 384
K V+ R + + +V L + G DEA + E+MP K + + W L+
Sbjct: 306 ----KQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSG 360
Query: 385 CETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMK 436
+ G++ + + K ++ N +++++ + A G +E ++ S MK
Sbjct: 361 YVSSGHIGEAKLIFKEMK---EKNILSWMIMISGLAENGFGEEGLKLFSCMK 409
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 126/375 (33%), Positives = 200/375 (53%), Gaps = 2/375 (0%)
Query: 68 PFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHS 127
W+ ++ Y++ A++L M AG+ P YT+ VL A +E GKQ+HS
Sbjct: 287 SITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHS 346
Query: 128 LGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARD 187
+K+G + + + T +++Y K+G AR FD + + W ++I G Q +
Sbjct: 347 FLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEE 406
Query: 188 AIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSL 247
A+ ++ M+ G P+ TM S+ AC S+ L+LG Q+H + K ++ + ++L
Sbjct: 407 ALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHG--HTIKHGFGLEVPIGSAL 464
Query: 248 VDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNY 307
MY KCG ++ VF ++V SW ++I G + +G +EALE F M G+ P+
Sbjct: 465 STMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDD 524
Query: 308 VTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVE 367
VTFV ++SAC H G V+ G YF+MM + G+ P++ HY CMVDLL RAG L EA + +E
Sbjct: 525 VTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIE 584
Query: 368 EMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKE 427
+ +W L+ AC+ +G E+G Y + L AL YV LS IY G ++
Sbjct: 585 SANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRD 644
Query: 428 VERIRSSMKEGRLAK 442
VER+ M+ ++K
Sbjct: 645 VERVWKHMRANGVSK 659
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 181/405 (44%), Gaps = 43/405 (10%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRA---GVLPDRYTLPIVLKAVCQSFAIELGKQV 125
+ W+ ++ Y A+++ L LR G D Y VL ++ + + LG+Q+
Sbjct: 185 YTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIYVGLGRQI 243
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLA 185
H + +K GL + +Y K A +FD + D +W+A++ G SQ G +
Sbjct: 244 HCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGES 303
Query: 186 RDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWN 245
+A+++F M G P T+V + +AC + L+ G QLH+ + K +
Sbjct: 304 LEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHS--FLLKLGFERHLFATT 361
Query: 246 SLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRP 305
+LVDMY K G + A K F + ER+V+ WTSLI GY + EAL + M+ AG+ P
Sbjct: 362 ALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIP 421
Query: 306 NYVTFVGVLSAC-----------VHGGKVQEG----------------RC-YFDMMKNVY 337
N T VL AC VHG ++ G +C + V+
Sbjct: 422 NDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVF 481
Query: 338 GITPR--LQHYGCMVDLLGRAGLLDEAMKMVEEM---PMKPNSIVWGCLMGACETYGNVE 392
TP + + M+ L G DEA+++ EEM M+P+ + + ++ AC G VE
Sbjct: 482 RRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVE 541
Query: 393 MGEYVAKHLQ---ALEPWNDGAYVVLSNIYANKGMWKEVERIRSS 434
G + + L+P D Y + ++ + G KE + S
Sbjct: 542 RGWFYFNMMSDQIGLDPKVD-HYACMVDLLSRAGQLKEAKEFIES 585
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 155/301 (51%), Gaps = 10/301 (3%)
Query: 70 NWNNIIRCYTR---LEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVH 126
+WN++I Y++ + + ++L M +LP+ YTL + KA + +G+Q H
Sbjct: 82 SWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAH 141
Query: 127 SLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLAR 186
+L VK+ + Y +T + +YCK+G VF P+ +W+ ++ G + G
Sbjct: 142 ALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVE 201
Query: 187 DAIRV---FVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILM 243
+AI+V F+ + G D V L+S ++ + LG Q+H C+ K + +
Sbjct: 202 EAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATI-YVGLGRQIH-CIT-IKNGLLGFVAL 258
Query: 244 WNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGV 303
N+LV MY KC ++ A K+F + +RN +W++++ GY+ +G EA++ F M AG+
Sbjct: 259 SNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGI 318
Query: 304 RPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAM 363
+P+ T VGVL+AC ++EG+ + + G L +VD+ +AG L +A
Sbjct: 319 KPSEYTIVGVLNACSDICYLEEGKQLHSFLLKL-GFERHLFATTALVDMYAKAGCLADAR 377
Query: 364 K 364
K
Sbjct: 378 K 378
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 138/300 (46%), Gaps = 13/300 (4%)
Query: 90 LHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYC 149
+H + + P TL L Q + G+ VH ++ G T +N Y
Sbjct: 1 MHPSTFQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYA 60
Query: 150 KSGEFTSARMVFDENPDPKLGSWNAVIGGLSQ-GGLARD--AIRVFVNMRRHGFAPDGVT 206
K G+ A +F+ + SWN++I G SQ GG++ +++F MR P+ T
Sbjct: 61 KCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYT 120
Query: 207 MVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFAT 266
+ + A S+ +G Q H V K + DI + SLV MY K G ++ KVFA
Sbjct: 121 LAGIFKAESSLQSSTVGRQAHALV--VKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAY 178
Query: 267 MDERNVSSWTSLIVGYAMHGHVNEALECFWCM---REAGVRPNYVTFVGVLSACVHGGKV 323
M ERN +W++++ GYA G V EA++ F +E G +YV F VLS+ V
Sbjct: 179 MPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYV 237
Query: 324 QEGR-CYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLM 382
GR + +KN G+ + +V + + L+EA KM + + NSI W ++
Sbjct: 238 GLGRQIHCITIKN--GLLGFVALSNALVTMYSKCESLNEACKMFDSSGDR-NSITWSAMV 294
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 32/207 (15%)
Query: 228 TCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGH 287
TC+ HA N LV+ Y KCG++ A+ +F + ++V SW SLI GY+ +G
Sbjct: 47 TCIQHA-----------NVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGG 95
Query: 288 VNEA---LECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQ 344
++ + ++ F MR + PN T G+ A GR + + ++
Sbjct: 96 ISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGR-------QAHALVVKMS 148
Query: 345 HYG------CMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVA 398
+G +V + +AGL+++ +K+ MP + N+ W ++ T G VE V
Sbjct: 149 SFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPER-NTYTWSTMVSGYATRGRVEEAIKVF 207
Query: 399 K-HLQALEPWNDGAYV---VLSNIYAN 421
L+ E +D YV VLS++ A
Sbjct: 208 NLFLREKEEGSDSDYVFTAVLSSLAAT 234
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 232 bits (591), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 202/378 (53%), Gaps = 2/378 (0%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WN+II Y + A++L +M+ D T +++ + ++ GK +HS G
Sbjct: 375 SWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNG 434
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
+K G+ + I++Y K GE + +F +WN VI + G +
Sbjct: 435 IKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGL 494
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
+V MR+ PD T + C S+ +LG ++H C+ + +++ + N+L++
Sbjct: 495 QVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLL--RFGYESELQIGNALIE 552
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
MY KCG ++ + +VF M R+V +WT +I Y M+G +ALE F M ++G+ P+ V
Sbjct: 553 MYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVV 612
Query: 310 FVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
F+ ++ AC H G V EG F+ MK Y I P ++HY C+VDLL R+ + +A + ++ M
Sbjct: 613 FIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAM 672
Query: 370 PMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVE 429
P+KP++ +W ++ AC T G++E E V++ + L P + G ++ SN YA W +V
Sbjct: 673 PIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVS 732
Query: 430 RIRSSMKEGRLAKVPAYS 447
IR S+K+ + K P YS
Sbjct: 733 LIRKSLKDKHITKNPGYS 750
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 173/348 (49%), Gaps = 7/348 (2%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WN++I Y+ AL ++ + + ++PD +T+ VL A ++ G+ +H
Sbjct: 174 SWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFA 233
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
+K G+ + G + +Y K T AR VFDE S+N +I G + + +++
Sbjct: 234 LKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESV 293
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
R+F+ F PD +T+ S+ ACG + DL L ++ Y KA + + N L+D
Sbjct: 294 RMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYN--YMLKAGFVLESTVRNILID 350
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
+Y KCG M A VF +M+ ++ SW S+I GY G + EA++ F M + +++T
Sbjct: 351 VYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHIT 410
Query: 310 FVGVLSACVHGGKVQEGR-CYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEE 368
++ ++S ++ G+ + + +K+ GI L ++D+ + G + +++K+
Sbjct: 411 YLMLISVSTRLADLKFGKGLHSNGIKS--GICIDLSVSNALIDMYAKCGEVGDSLKIFSS 468
Query: 369 MPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLS 416
M +++ W ++ AC +G+ G V ++ E D A +++
Sbjct: 469 MGTG-DTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVT 515
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 172/352 (48%), Gaps = 9/352 (2%)
Query: 61 FLESNPAP--FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFA 118
F +PA + WN+IIR +++ AL + + + V PD+YT P V+KA F
Sbjct: 62 FRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFD 121
Query: 119 IELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGG 178
E+G V+ + +G +++ + +++Y + G T AR VFDE P L SWN++I G
Sbjct: 122 AEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISG 181
Query: 179 LSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAER 238
S G +A+ ++ ++ PD T+ S+ A G++ ++ G LH + K+
Sbjct: 182 YSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHG--FALKSGVN 239
Query: 239 TDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCM 298
+ +++ N LV MY K R A +VF MD R+ S+ ++I GY V E++ F
Sbjct: 240 SVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLEN 299
Query: 299 REAGVRPNYVTFVGVLSACVHGGKVQEGRCYFD-MMKNVYGITPRLQHYGCMVDLLGRAG 357
+ +P+ +T VL AC H + + ++ M+K + + +++ ++D+ + G
Sbjct: 300 LDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN--ILIDVYAKCG 356
Query: 358 LLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWND 409
+ A + M K +++ W ++ G++ + K + +E D
Sbjct: 357 DMITARDVFNSMECK-DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQAD 407
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 156/344 (45%), Gaps = 22/344 (6%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
++N +I Y +LE ++R+ + L PD T+ VL+A + L K +++
Sbjct: 275 SYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYM 333
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
+K G I++Y K G+ +AR VF+ SWN++I G Q G +A+
Sbjct: 334 LKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAM 393
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
++F M D +T + L S + DL+ G LH+ K+ D+ + N+L+D
Sbjct: 394 KLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHS--NGIKSGICIDLSVSNALID 451
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
MY KCG + + K+F++M + +W ++I G L+ MR++ V P+ T
Sbjct: 452 MYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMAT 511
Query: 310 FVGVLSACVHGGKVQEGR----CYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKM 365
F+ L C + G+ C +G LQ ++++ + G L+ + ++
Sbjct: 512 FLVTLPMCASLAAKRLGKEIHCCLLR-----FGYESELQIGNALIEMYSKCGCLENSSRV 566
Query: 366 VEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWND 409
E M + + + W ++ A YG E +ALE + D
Sbjct: 567 FERMSRR-DVVTWTGMIYAYGMYGEGE---------KALETFAD 600
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 119/226 (52%), Gaps = 3/226 (1%)
Query: 103 RYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFD 162
R + P + +A+ S + +++H+L + +GL ++++ I+ Y E S+ VF
Sbjct: 4 RVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFR 63
Query: 163 E-NPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQ 221
+P + WN++I S+ GL +A+ + +R +PD T S+ AC + D +
Sbjct: 64 RVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAE 123
Query: 222 LGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVG 281
+G ++ + +D+ + N+LVDMY + G + A +VF M R++ SW SLI G
Sbjct: 124 MGDLVYEQIL--DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISG 181
Query: 282 YAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGR 327
Y+ HG+ EALE + ++ + + P+ T VL A + V++G+
Sbjct: 182 YSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQ 227
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 3/147 (2%)
Query: 247 LVDMYGKCGRMDLAYKVFATMD-ERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRP 305
L+D Y + VF + +NV W S+I ++ +G EALE + +RE+ V P
Sbjct: 45 LIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSP 104
Query: 306 NYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKM 365
+ TF V+ AC + G ++ + ++ G L +VD+ R GLL A ++
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYEQILDM-GFESDLFVGNALVDMYSRMGLLTRARQV 163
Query: 366 VEEMPMKPNSIVWGCLMGACETYGNVE 392
+EMP++ + + W L+ ++G E
Sbjct: 164 FDEMPVR-DLVSWNSLISGYSSHGYYE 189
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 231 bits (590), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 126/382 (32%), Positives = 207/382 (54%), Gaps = 3/382 (0%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRA-GVLPDRYTLPIVLKAVCQSFAIELGKQVHS 127
++W ++ Y + + P AL L+ LM R P+ +T+ I + A I GK++H
Sbjct: 183 YSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHG 242
Query: 128 LGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARD 187
V+ GL ++E + +++Y K G AR +FD+ + + SW ++I + R+
Sbjct: 243 HIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWRE 302
Query: 188 AIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSL 247
+F + P+ T + +AC + +LG Q+H Y + +SL
Sbjct: 303 GFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHG--YMTRVGFDPYSFASSSL 360
Query: 248 VDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNY 307
VDMY KCG ++ A V + ++ SWTSLI G A +G +EAL+ F + ++G +P++
Sbjct: 361 VDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDH 420
Query: 308 VTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVE 367
VTFV VLSAC H G V++G +F + + ++ HY C+VDLL R+G ++ ++
Sbjct: 421 VTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVIS 480
Query: 368 EMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKE 427
EMPMKP+ +W ++G C TYGN+++ E A+ L +EP N YV ++NIYA G W+E
Sbjct: 481 EMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEE 540
Query: 428 VERIRSSMKEGRLAKVPAYSLT 449
++R M+E + K P S T
Sbjct: 541 EGKMRKRMQEIGVTKRPGSSWT 562
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 147/335 (43%), Gaps = 36/335 (10%)
Query: 88 LRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINL 147
LR V +L P T +++ Q+ A+E GK+VH G + +
Sbjct: 70 LREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRM 129
Query: 148 YCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNM------------ 195
Y K G AR VFDE P+ L SWN ++ G ++ GL +A ++F M
Sbjct: 130 YAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMV 189
Query: 196 --------------------RRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKA 235
R P+ T+ +A +V ++ G ++H + +A
Sbjct: 190 TGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHI--VRA 247
Query: 236 AERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECF 295
+D ++W+SL+DMYGKCG +D A +F + E++V SWTS+I Y E F
Sbjct: 248 GLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLF 307
Query: 296 WCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGR 355
+ + RPN TF GVL+AC + G+ M V G P +VD+ +
Sbjct: 308 SELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRV-GFDPYSFASSSLVDMYTK 366
Query: 356 AGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGN 390
G ++ A +V+ P KP+ + W L+G C G
Sbjct: 367 CGNIESAKHVVDGCP-KPDLVSWTSLIGGCAQNGQ 400
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 10/160 (6%)
Query: 184 LARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILM 243
L R+A+++ ++ P T +L C L+ G ++H + + I++
Sbjct: 69 LLREAVQLLGRAKK----PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFV--PGIVI 122
Query: 244 WNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGV 303
WN L+ MY KCG + A KVF M R++ SW ++ GYA G + EA + F M E
Sbjct: 123 WNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK-- 180
Query: 304 RPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRL 343
+ ++ +++ V + +E + +M+ V P +
Sbjct: 181 --DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNI 218
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 16/167 (9%)
Query: 60 HFLESNPAP--FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSF 117
H ++ P P +W ++I + P AL+ L+L++G PD T VL A +
Sbjct: 375 HVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAG 434
Query: 118 AIELGKQ-VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENP-DPKLGSWNAV 175
+E G + +S+ K L T ++L +SG F + V E P P W +V
Sbjct: 435 LVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASV 494
Query: 176 IGGLSQGG---LARDAIRVFVNMRRHGFAPDG----VTMVSLTSACG 215
+GG S G LA +A + + P+ VTM ++ +A G
Sbjct: 495 LGGCSTYGNIDLAEEAAQELFKIE-----PENPVTYVTMANIYAAAG 536
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 231 bits (589), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 141/468 (30%), Positives = 229/468 (48%), Gaps = 71/468 (15%)
Query: 36 IATQLCNCTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLML 95
+A QL +C+ + + I R PF N +IR T +++R +LML
Sbjct: 62 VAAQLVSCSSLLKSPDYSLSIFRN---SEERNPFVLNALIRGLTENARFESSVRHFILML 118
Query: 96 RAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFT 155
R GV PDR T P VLK+ + LG+ +H+ +K + + + +++Y K+G+
Sbjct: 119 RLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLK 178
Query: 156 SARMVFDENPD---------------------------------PKL--GSWNAVIGGLS 180
A VF+E+PD P+ GSW+ +I G
Sbjct: 179 HAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYV 238
Query: 181 QGGLARDAIRVF-------------------------------VNMRRHGFAPDGVTMVS 209
G A ++F M G P+ T+ +
Sbjct: 239 DSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAA 298
Query: 210 LTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDE 269
+ SAC G L G+++H Y + D + +LVDMY KCG +D A VF+ M+
Sbjct: 299 VLSACSKSGALGSGIRIHG--YILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNH 356
Query: 270 RNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCY 329
+++ SWT++I G+A+HG ++A++CF M +G +P+ V F+ VL+AC++ +V G +
Sbjct: 357 KDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNF 416
Query: 330 FDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYG 389
FD M+ Y I P L+HY +VDLLGRAG L+EA ++VE MP+ P+ W L AC+ +
Sbjct: 417 FDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHK 476
Query: 390 NVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKE 437
E V+++L L+P G+Y+ L +A+KG ++VE+ R S+++
Sbjct: 477 GYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQK 524
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 231 bits (589), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 126/379 (33%), Positives = 203/379 (53%), Gaps = 2/379 (0%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN ++ Y+++ +AL + M GV R+T+ VL A S I+ G+ +H L V
Sbjct: 230 WNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAV 289
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
K G ++ I++Y KS A +F+ + L +WN+V+ G +
Sbjct: 290 KTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLA 349
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAER--TDILMWNSLV 248
+F M G PD VT+ ++ CG + L+ G ++H + + R ++ + NSL+
Sbjct: 350 LFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLM 409
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYV 308
DMY KCG + A VF +M ++ +SW +I GY + AL+ F CM AGV+P+ +
Sbjct: 410 DMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEI 469
Query: 309 TFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEE 368
TFVG+L AC H G + EGR + M+ VY I P HY C++D+LGRA L+EA ++
Sbjct: 470 TFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAIS 529
Query: 369 MPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEV 428
P+ N +VW ++ +C +GN ++ K L LEP + G YV++SN+Y G ++EV
Sbjct: 530 KPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEV 589
Query: 429 ERIRSSMKEGRLAKVPAYS 447
+R +M++ + K P S
Sbjct: 590 LDVRDAMRQQNVKKTPGCS 608
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 164/334 (49%), Gaps = 17/334 (5%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELG--KQVH 126
F +N +I + +P +A+ + M G+LPD+YT P +LK S A+EL K+VH
Sbjct: 127 FGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG---SDAMELSDVKKVH 183
Query: 127 SLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGS-WNAVIGGLSQGGLA 185
L K+G ++ Y +G + Y K A+ VFDE PD WNA++ G SQ
Sbjct: 184 GLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRF 243
Query: 186 RDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWN 245
DA+ VF MR G T+ S+ SA GD+ G +H K +DI++ N
Sbjct: 244 EDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLA--VKTGSGSDIVVSN 301
Query: 246 SLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRP 305
+L+DMYGK ++ A +F MDER++ +W S++ + G + L F M +G+RP
Sbjct: 302 ALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRP 361
Query: 306 NYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQH----YGCMVDLLGRAGLLDE 361
+ VT VL C +++GR M V G+ R + ++D+ + G L +
Sbjct: 362 DIVTLTTVLPTCGRLASLRQGREIHGYMI-VSGLLNRKSSNEFIHNSLMDMYVKCGDLRD 420
Query: 362 AMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGE 395
A + + M +K +S W ++ YG GE
Sbjct: 421 ARMVFDSMRVK-DSASWNIMING---YGVQSCGE 450
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 114/250 (45%), Gaps = 7/250 (2%)
Query: 122 GKQVHSLGVKIG-LQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLS 180
G+Q+H V+ G L + T +N+Y K G A +VF + G +NA+I G
Sbjct: 79 GQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSERDVFG-YNALISGFV 137
Query: 181 QGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTD 240
G DA+ + MR +G PD T SL ++ +L ++H + K +D
Sbjct: 138 VNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM-ELSDVKKVHGLAF--KLGFDSD 194
Query: 241 ILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSS-WTSLIVGYAMHGHVNEALECFWCMR 299
+ + LV Y K ++ A KVF + +R+ S W +L+ GY+ +AL F MR
Sbjct: 195 CYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMR 254
Query: 300 EAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLL 359
E GV + T VLSA G + GR + G + ++D+ G++ L
Sbjct: 255 EEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKT-GSGSDIVVSNALIDMYGKSKWL 313
Query: 360 DEAMKMVEEM 369
+EA + E M
Sbjct: 314 EEANSIFEAM 323
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 21/146 (14%)
Query: 246 SLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRP 305
SLV+MY KCG M A VF ER+V + +LI G+ ++G +A+E + MR G+ P
Sbjct: 101 SLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILP 159
Query: 306 NYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGL------- 358
+ TF +L G E +K V+G+ +L G D +GL
Sbjct: 160 DKYTFPSLLK----GSDAME----LSDVKKVHGLAFKL---GFDSDCYVGSGLVTSYSKF 208
Query: 359 --LDEAMKMVEEMPMKPNSIVWGCLM 382
+++A K+ +E+P + +S++W L+
Sbjct: 209 MSVEDAQKVFDELPDRDDSVLWNALV 234
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 131/379 (34%), Positives = 194/379 (51%), Gaps = 3/379 (0%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+W +I + E AL L MLR + V+ A + A +G QVH L
Sbjct: 192 SWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLI 251
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
+K+G EY I Y +R VFDE ++ W A++ G S DA+
Sbjct: 252 IKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDAL 311
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
+F M R+ P+ T S ++C ++G L G ++H K TD + NSLV
Sbjct: 312 SIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVA--VKLGLETDAFVGNSLVV 369
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
MY G ++ A VF + ++++ SW S+IVG A HG A F M P+ +T
Sbjct: 370 MYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEIT 429
Query: 310 FVGVLSACVHGGKVQEGR-CYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEE 368
F G+LSAC H G +++GR ++ M + I ++QHY CMVD+LGR G L EA +++E
Sbjct: 430 FTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIER 489
Query: 369 MPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEV 428
M +KPN +VW L+ AC + +V+ GE A + L+ + AYV+LSNIYA+ G W V
Sbjct: 490 MVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNV 549
Query: 429 ERIRSSMKEGRLAKVPAYS 447
++R MK+ + K P S
Sbjct: 550 SKLRVKMKKNGIMKKPGSS 568
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 110/248 (44%), Gaps = 16/248 (6%)
Query: 148 YCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTM 207
Y + G+ A +F + P + SW +I GL Q + +A+ +F NM R
Sbjct: 169 YLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPF 228
Query: 208 VSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATM 267
+ +AC + +G+Q+H + K + + SL+ Y C R+ + KVF
Sbjct: 229 TCVITACANAPAFHMGIQVHGLI--IKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEK 286
Query: 268 DERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGR 327
V+ WT+L+ GY+++ +AL F M + PN TF L++C G + G
Sbjct: 287 VHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWG- 345
Query: 328 CYFDMMKNVYGITPRLQHY------GCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCL 381
K ++G+ +L +V + +G +++A+ + ++ K + + W +
Sbjct: 346 ------KEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSI 398
Query: 382 MGACETYG 389
+ C +G
Sbjct: 399 IVGCAQHG 406
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 17/202 (8%)
Query: 142 TGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFA 201
T I Y +S A +FDE P + SWN++I G + G A+++F M
Sbjct: 70 TKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV- 128
Query: 202 PDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAY 261
V+ ++ + C G + Q Y D WNS+V Y + G++D A
Sbjct: 129 ---VSWTAMVNGCFRSGKVD---QAERLFYQMPV---KDTAAWNSMVHGYLQFGKVDDAL 179
Query: 262 KVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGG 321
K+F M +NV SWT++I G + EAL+ F M ++ F V++AC +
Sbjct: 180 KLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAP 239
Query: 322 KVQEGRCYFDMMKNVYGITPRL 343
F M V+G+ +L
Sbjct: 240 A-------FHMGIQVHGLIIKL 254
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 132/380 (34%), Positives = 191/380 (50%), Gaps = 35/380 (9%)
Query: 101 PDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMV 160
PD + ++KA +I+ G+QVH + +E ++ +++Y K G SA+ V
Sbjct: 103 PDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAV 162
Query: 161 FDEN-------------------------------PDPKLGSWNAVIGGLSQGGLARDAI 189
FD P L SW A+I G Q G +A
Sbjct: 163 FDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAF 222
Query: 190 RVFVNMRRHGFAP-DGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
VF MRR D + + S+ AC ++ G Q+H V + + + N+L+
Sbjct: 223 SVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVI--ALGFDSCVFISNALI 280
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYV 308
DMY KC + A +F+ M R+V SWTSLIVG A HG +AL + M GV+PN V
Sbjct: 281 DMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEV 340
Query: 309 TFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEE 368
TFVG++ AC H G V++GR F M YGI P LQHY C++DLLGR+GLLDEA ++
Sbjct: 341 TFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHT 400
Query: 369 MPMKPNSIVWGCLMGACETYGNVEMGEYVAKHL-QALEPWNDGAYVVLSNIYANKGMWKE 427
MP P+ W L+ AC+ G +MG +A HL + + + Y++LSNIYA+ +W +
Sbjct: 401 MPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGK 460
Query: 428 VERIRSSMKEGRLAKVPAYS 447
V R + E + K P +S
Sbjct: 461 VSEARRKLGEMEVRKDPGHS 480
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 104/214 (48%), Gaps = 7/214 (3%)
Query: 122 GKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQ 181
K +H+ VK+G+ +N+Y K G + A VFDE P +W +V+ L+Q
Sbjct: 22 AKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQ 81
Query: 182 GGLA-RDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTD 240
L+ + G PD +L AC ++G + G Q+H ++ A D
Sbjct: 82 ANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYA--ND 139
Query: 241 ILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMRE 300
++ +SLVDMY KCG ++ A VF ++ +N SWT+++ GYA G EALE F R
Sbjct: 140 EVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELF---RI 196
Query: 301 AGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMK 334
V+ N ++ ++S V GK E F M+
Sbjct: 197 LPVK-NLYSWTALISGFVQSGKGLEAFSVFTEMR 229
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 130/383 (33%), Positives = 194/383 (50%), Gaps = 40/383 (10%)
Query: 98 GVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSA 157
G+ P+ +T V+ + S ++LGKQ+H +K+GL +N + + +N Y K T A
Sbjct: 88 GIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDA 147
Query: 158 RMVFDENPDPKLGS-------------------------------WNAVIGGLSQGGLAR 186
R FD+ DP + S WNAVIGG SQ G
Sbjct: 148 RRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNE 207
Query: 187 DAIRVFVNMRRHGFA-PDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWN 245
+A+ FV+M R G P+ T +A ++ G +H C +R ++ +WN
Sbjct: 208 EAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKF-LGKRFNVFVWN 266
Query: 246 SLVDMYGKCGRMDLAYKVFATMDE--RNVSSWTSLIVGYAMHGHVNEALECFWCM-REAG 302
SL+ Y KCG M+ + F ++E RN+ SW S+I GYA +G EA+ F M ++
Sbjct: 267 SLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTN 326
Query: 303 VRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITP---RLQHYGCMVDLLGRAGLL 359
+RPN VT +GVL AC H G +QEG YF+ N Y P L+HY CMVD+L R+G
Sbjct: 327 LRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRF 385
Query: 360 DEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIY 419
EA ++++ MP+ P W L+G C+ + N + + A + L+P + +YV+LSN Y
Sbjct: 386 KEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAY 445
Query: 420 ANKGMWKEVERIRSSMKEGRLAK 442
+ W+ V IR MKE L +
Sbjct: 446 SAMENWQNVSLIRRKMKETGLKR 468
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 104/224 (46%), Gaps = 7/224 (3%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGV-LPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
WN +I +++ A+ V MLR GV +P+ T P + A+ + GK +H+
Sbjct: 193 WNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACA 252
Query: 130 VK-IGLQTNEYCETGFINLYCKSGEFTSARMVFD--ENPDPKLGSWNAVIGGLSQGGLAR 186
+K +G + N + I+ Y K G + + F+ E + SWN++I G + G
Sbjct: 253 IKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGE 312
Query: 187 DAIRVFVNM-RRHGFAPDGVTMVSLTSACGSVGDLQLG-LQLHTCVYHAKAAERTDILMW 244
+A+ +F M + P+ VT++ + AC G +Q G + + V ++ +
Sbjct: 313 EAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHY 372
Query: 245 NSLVDMYGKCGRMDLAYKVFATMD-ERNVSSWTSLIVGYAMHGH 287
+VDM + GR A ++ +M + + W +L+ G +H +
Sbjct: 373 ACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSN 416
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 138/356 (38%), Gaps = 81/356 (22%)
Query: 156 SARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACG 215
+A VFDE P+ + S AVIG + +A + F + G P+ T ++ +
Sbjct: 45 NAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSST 104
Query: 216 SVGDLQLGLQLH---------TCVY--------HAKAAERTD------------ILMWNS 246
+ D++LG QLH + V+ + K + TD ++ +
Sbjct: 105 TSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITN 164
Query: 247 LVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCM-REAGVRP 305
L+ Y K + A +F M ER+V +W ++I G++ G EA+ F M RE V P
Sbjct: 165 LISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIP 224
Query: 306 NYVTFVGVLSA----CVHGGKVQEGRCYFDMMK---NVYGITPRLQHY---GCMVDLLGR 355
N TF ++A HG C + NV+ + Y G M D L
Sbjct: 225 NESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLA 284
Query: 356 AGLLDEAM---------------------------KMVEEMPMKPNSIVWGCLMGACETY 388
L+E KMV++ ++PN++ ++ AC
Sbjct: 285 FNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHA 344
Query: 389 GNVEMG---------EYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSM 435
G ++ G +Y +L LE Y + ++ + G +KE E + SM
Sbjct: 345 GLIQEGYMYFNKAVNDYDDPNLLELE-----HYACMVDMLSRSGRFKEAEELIKSM 395
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 123/378 (32%), Positives = 197/378 (52%), Gaps = 2/378 (0%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+W ++I Y R+ A+ + M + V P+ T + A + G+Q+H
Sbjct: 277 SWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNV 336
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
+ +GL + + +Y G SA ++F + SW+ +IGG Q G +
Sbjct: 337 LSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGF 396
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
+ F MR+ G P + SL S G++ ++ G Q+H + + + +SL++
Sbjct: 397 KYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVR--SSLIN 454
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
MY KCG + A +F D ++ S T++I GYA HG EA++ F + G RP+ VT
Sbjct: 455 MYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVT 514
Query: 310 FVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
F+ VL+AC H G++ G YF+MM+ Y + P +HYGCMVDLL RAG L +A KM+ EM
Sbjct: 515 FISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEM 574
Query: 370 PMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVE 429
K + +VW L+ AC+ G++E G A+ + L+P A V L+NIY++ G +E
Sbjct: 575 SWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAA 634
Query: 430 RIRSSMKEGRLAKVPAYS 447
+R +MK + K P +S
Sbjct: 635 NVRKNMKAKGVIKEPGWS 652
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 158/357 (44%), Gaps = 11/357 (3%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLM--LRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHS 127
+W +II+ Y AL L M + V PD L +VLKA QS I G+ +H+
Sbjct: 73 SWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHA 132
Query: 128 LGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARD 187
VK L ++ Y + +++Y + G+ + VF E P +W A+I GL G ++
Sbjct: 133 YAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKE 192
Query: 188 AIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSL 247
+ F M R D T AC + ++ G +HT V T + + NSL
Sbjct: 193 GLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFV--TTLCVANSL 250
Query: 248 VDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNY 307
MY +CG M +F M ER+V SWTSLIV Y G +A+E F MR + V PN
Sbjct: 251 ATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNE 310
Query: 308 VTFVGVLSACVHGGKVQEGRCYFDMMKNV--YGITPRLQHYGCMVDLLGRAGLLDEAMKM 365
TF + SAC ++ G + NV G+ L M+ + G L A +
Sbjct: 311 QTFASMFSACASLSRLVWGE---QLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVL 367
Query: 366 VEEMPMKPNSIVWGCLMGA-CETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYAN 421
+ M + + I W ++G C+ E +Y + Q+ D A L ++ N
Sbjct: 368 FQGMRCR-DIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGN 423
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 7/268 (2%)
Query: 151 SGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMR--RHGFAPDGVTMV 208
+G +AR VFD+ P + SW ++I + +A+ +F MR H +PD +
Sbjct: 53 AGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLS 112
Query: 209 SLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMD 268
+ ACG ++ G LH Y K + + + + +SL+DMY + G++D + +VF+ M
Sbjct: 113 VVLKACGQSSNIAYGESLH--AYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMP 170
Query: 269 ERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRC 328
RN +WT++I G G E L F M + + TF L AC +V+ G+
Sbjct: 171 FRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKA 230
Query: 329 YFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETY 388
+ V G L + + G + + + + E M + + + W L+ A +
Sbjct: 231 IHTHVI-VRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSER-DVVSWTSLIVAYKRI 288
Query: 389 GN-VEMGEYVAKHLQALEPWNDGAYVVL 415
G V+ E K + P N+ + +
Sbjct: 289 GQEVKAVETFIKMRNSQVPPNEQTFASM 316
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/309 (37%), Positives = 173/309 (55%), Gaps = 2/309 (0%)
Query: 135 QTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVN 194
+ NE IN Y G A +F++ P + SW +I G SQ R+AI VF
Sbjct: 963 EKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYK 1022
Query: 195 MRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKC 254
M G PD VTM ++ SAC +G L++G ++H +Y + D+ + ++LVDMY KC
Sbjct: 1023 MMEEGIIPDEVTMSTVISACAHLGVLEIGKEVH--MYTLQNGFVLDVYIGSALVDMYSKC 1080
Query: 255 GRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVL 314
G ++ A VF + ++N+ W S+I G A HG EAL+ F M V+PN VTFV V
Sbjct: 1081 GSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVF 1140
Query: 315 SACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPN 374
+AC H G V EGR + M + Y I ++HYG MV L +AGL+ EA++++ M +PN
Sbjct: 1141 TACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPN 1200
Query: 375 SIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSS 434
+++WG L+ C + N+ + E L LEP N G Y +L ++YA + W++V IR
Sbjct: 1201 AVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGR 1260
Query: 435 MKEGRLAKV 443
M+E + K+
Sbjct: 1261 MRELGIEKI 1269
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 178/431 (41%), Gaps = 61/431 (14%)
Query: 24 LLLDSANNPVTLIATQLCNCTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEA 83
++ S N L+ + CT +L+ + + + P F +N + + +
Sbjct: 796 MIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQ----EPNVFVYNALFKGFVTCSH 851
Query: 84 PRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETG 143
P +L L+V MLR V P YT ++KA SFA G+ + + K G + +T
Sbjct: 852 PIRSLELYVRMLRDSVSPSSYTYSSLVKA--SSFASRFGESLQAHIWKFGFGFHVKIQTT 909
Query: 144 FINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPD 203
I+ Y +G AR VFDE P+ D
Sbjct: 910 LIDFYSATGRIREARKVFDEMPE-----------------------------------RD 934
Query: 204 GVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKV 263
+ ++ SA V D+ L A + N L++ Y G ++ A +
Sbjct: 935 DIAWTTMVSAYRRVLDMDSANSL------ANQMSEKNEATSNCLINGYMGLGNLEQAESL 988
Query: 264 FATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKV 323
F M +++ SWT++I GY+ + EA+ F+ M E G+ P+ VT V+SAC H G +
Sbjct: 989 FNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVL 1048
Query: 324 QEGR-CYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLM 382
+ G+ + ++N G + +VD+ + G L+ A+ + +P K N W ++
Sbjct: 1049 EIGKEVHMYTLQN--GFVLDVYIGSALVDMYSKCGSLERALLVFFNLP-KKNLFCWNSII 1105
Query: 383 GACETYGNVE--MGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRL 440
+G + + + +++++P N +V + + G+ E RI SM
Sbjct: 1106 EGLAAHGFAQEALKMFAKMEMESVKP-NAVTFVSVFTACTHAGLVDEGRRIYRSM----- 1159
Query: 441 AKVPAYSLTTN 451
+ YS+ +N
Sbjct: 1160 --IDDYSIVSN 1168
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 114/221 (51%), Gaps = 2/221 (0%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
+W +I+ Y++ + R A+ + M+ G++PD T+ V+ A +E+GK+VH
Sbjct: 998 ISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMY 1057
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
++ G + Y + +++Y K G A +VF P L WN++I GL+ G A++A
Sbjct: 1058 TLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEA 1117
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
+++F M P+ VT VS+ +AC G + G +++ + + +++ + +V
Sbjct: 1118 LKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSI-VSNVEHYGGMV 1176
Query: 249 DMYGKCGRMDLAYKVFATMD-ERNVSSWTSLIVGYAMHGHV 288
++ K G + A ++ M+ E N W +L+ G +H ++
Sbjct: 1177 HLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNL 1217
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 124/378 (32%), Positives = 208/378 (55%), Gaps = 8/378 (2%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WN +I + + L L M + G D T+ +L A E+GKQ H+
Sbjct: 386 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFL 445
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDEN--PDPKLGSWNAVIGGLSQGGLARD 187
++ G+Q E + I++Y KSG ++ +F+ + + +WN++I G +Q G
Sbjct: 446 IRQGIQF-EGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEK 504
Query: 188 AIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSL 247
VF M P+ VT+ S+ AC +G + LG QLH + + ++ + ++L
Sbjct: 505 TFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHG--FSIRQYLDQNVFVASAL 562
Query: 248 VDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNY 307
VDMY K G + A +F+ ERN ++T++I+GY HG A+ F M+E+G++P+
Sbjct: 563 VDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDA 622
Query: 308 VTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVE 367
+TFV VLSAC + G + EG F+ M+ VY I P +HY C+ D+LGR G ++EA + V+
Sbjct: 623 ITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVK 682
Query: 368 EMPMKPN-SIVWGCLMGACETYGNVEMGEYVAKHLQALEPWND--GAYVVLSNIYANKGM 424
+ + N + +WG L+G+C+ +G +E+ E V++ L + + G V+LSN+YA +
Sbjct: 683 GLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQK 742
Query: 425 WKEVERIRSSMKEGRLAK 442
WK V+++R M+E L K
Sbjct: 743 WKSVDKVRRGMREKGLKK 760
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 186/415 (44%), Gaps = 60/415 (14%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN +I Y + A R +M+R V P + V AV S +I+ + L +
Sbjct: 182 WNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLML 241
Query: 131 KIGLQTNEYCETGF-----INLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLA 185
K+G +EY + F I++Y + G+ S+R VFD + + WN +IG Q
Sbjct: 242 KLG---DEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCL 298
Query: 186 RDAIRVFVN-MRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMW 244
++I +F+ + D VT + SA ++ ++LG Q H V +K I++
Sbjct: 299 VESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFV--SKNFRELPIVIV 356
Query: 245 NSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVR 304
NSL+ MY +CG + ++ VF +M ER+V SW ++I + +G +E L + M++ G +
Sbjct: 357 NSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFK 416
Query: 305 PNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGC---MVDLLGRAGLLDE 361
+Y+T +LSA + + G+ + + I +Q G ++D+ ++GL+
Sbjct: 417 IDYITVTALLSAASNLRNKEIGK-----QTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRI 471
Query: 362 AMKMVE------------------------------------EMPMKPNSIVWGCLMGAC 385
+ K+ E E ++PN++ ++ AC
Sbjct: 472 SQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPAC 531
Query: 386 ETYGNVEMGEYVAKHLQALEPWNDGAYVVLS---NIYANKGMWKEVERIRSSMKE 437
G+V++G+ + H ++ + D V S ++Y+ G K E + S KE
Sbjct: 532 SQIGSVDLGKQL--HGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKE 584
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 111/253 (43%), Gaps = 30/253 (11%)
Query: 149 CKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAP----DG 204
C+ G AR +FD P P WN +I G L +A+ + M++ AP D
Sbjct: 50 CQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKT--APFTNCDA 107
Query: 205 VTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMY------GKCGRMD 258
T S AC +L+ G +H + + + + ++ NSL++MY C D
Sbjct: 108 YTYSSTLKACAETKNLKAGKAVH--CHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYD 165
Query: 259 LAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACV 318
+ KVF M +NV +W +LI Y G EA F M V+P+ V+FV V A
Sbjct: 166 VVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVS 225
Query: 319 HGGKVQEGRCYFDMM--------KNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMP 370
+++ ++ +M K+++ ++ + Y + D+ E+ + V +
Sbjct: 226 ISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDI--------ESSRRVFDSC 277
Query: 371 MKPNSIVWGCLMG 383
++ N VW ++G
Sbjct: 278 VERNIEVWNTMIG 290
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/426 (21%), Positives = 162/426 (38%), Gaps = 48/426 (11%)
Query: 57 LRTHFLESNPAPFN--WNNIIRCYTRLEAPRNALRLHVLMLRAGVLP--DRYTLPIVLKA 112
L ++ P P WN II + P AL + M + D YT LKA
Sbjct: 57 LARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKA 116
Query: 113 VCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLY--CKSG----EFTSARMVFDENPD 166
++ ++ GK VH ++ ++ +N+Y C + E+ R VFD
Sbjct: 117 CAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRR 176
Query: 167 PKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQL 226
+ +WN +I + G +A R F M R P V+ V++ A ++
Sbjct: 177 KNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVF 236
Query: 227 HTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHG 286
+ + D+ + +S + MY + G ++ + +VF + ERN+ W ++I Y +
Sbjct: 237 YGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQND 296
Query: 287 HVNEALECFW-CMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITP---- 341
+ E++E F + + + VT++ SA +V+ GR + + + P
Sbjct: 297 CLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIV 356
Query: 342 --------------------------RLQHYGCMVDLLGRAGLLDEAMKMVEEMP---MK 372
+ + M+ + GL DE + +V EM K
Sbjct: 357 NSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFK 416
Query: 373 PNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIR 432
+ I L+ A N E+G+ L +G L ++Y+ G+ RI
Sbjct: 417 IDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLI----RIS 472
Query: 433 SSMKEG 438
+ EG
Sbjct: 473 QKLFEG 478
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 140/402 (34%), Positives = 208/402 (51%), Gaps = 14/402 (3%)
Query: 52 VYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLR----AGVLPDRYTLP 107
+YA R L+ W+ +I Y E + A + ML A V P +
Sbjct: 257 IYAR--RVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTP--VAIG 312
Query: 108 IVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDP 167
++L + + G+ VH VK G + + I+ Y K G A F E
Sbjct: 313 LILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLK 372
Query: 168 KLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLH 227
+ S+N++I G ++ R+F MR G PD T++ + +AC + L G H
Sbjct: 373 DVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCH 432
Query: 228 T-CVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHG 286
CV H A + + N+L+DMY KCG++D+A +VF TM +R++ SW +++ G+ +HG
Sbjct: 433 GYCVVHGYAVNTS---ICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHG 489
Query: 287 HVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFD-MMKNVYGITPRLQH 345
EAL F M+E GV P+ VT + +LSAC H G V EG+ F+ M + + + PR+ H
Sbjct: 490 LGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDH 549
Query: 346 YGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALE 405
Y CM DLL RAG LDEA V +MP +P+ V G L+ AC TY N E+G V+K +Q+L
Sbjct: 550 YNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLG 609
Query: 406 PWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
+ + V+LSN Y+ W++ RIR K+ L K P YS
Sbjct: 610 ETTE-SLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYS 650
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 174/378 (46%), Gaps = 22/378 (5%)
Query: 15 VSQRSITQTLLLDSANNPVTLIATQL-CNCTHIHQLNQVYAHILRTHFLESNPAPFNWNN 73
+ Q + ++L L S+ V L T+L +C + V+ I P W+
Sbjct: 21 IHQHLLKRSLTLSSSTVLVNL--TRLYASCNEVELARHVFDEIPHPRI-----NPIAWDL 73
Query: 74 IIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIG 133
+IR Y + AL L+ ML +GV P +YT P VLKA AI+ GK +HS
Sbjct: 74 MIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSD 133
Query: 134 LQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFV 193
T+ Y T ++ Y K GE A VFDE P + +WNA+I G S D I +F+
Sbjct: 134 FATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFL 193
Query: 194 NMRR-HGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYG 252
+MRR G +P+ T+V + A G G L+ G +H Y + D+++ ++D+Y
Sbjct: 194 DMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHG--YCTRMGFSNDLVVKTGILDVYA 251
Query: 253 KCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCM----REAGVRPNYV 308
K + A +VF ++N +W+++I GY + + EA E F+ M A V P V
Sbjct: 252 KSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTP--V 309
Query: 309 TFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEE 368
+L C G + GRC G L ++ + G L +A + E
Sbjct: 310 AIGLILMGCARFGDLSGGRCVHCYAVKA-GFILDLTVQNTIISFYAKYGSLCDAFRQFSE 368
Query: 369 MPMKP----NSIVWGCLM 382
+ +K NS++ GC++
Sbjct: 369 IGLKDVISYNSLITGCVV 386
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 182/384 (47%), Gaps = 20/384 (5%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRA-GVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
WN +I ++ + + L + M R G+ P+ T+ + A+ ++ A+ GK VH
Sbjct: 172 WNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYC 231
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
++G + +TG +++Y KS AR VFD + +W+A+IGG + + ++A
Sbjct: 232 TRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAG 291
Query: 190 RVFVNMRRHGFAPDGVTMVS------LTSACGSVGDLQLGLQLHTCVYHAKAAERTDILM 243
VF M D V MV+ + C GDL G +H Y KA D+ +
Sbjct: 292 EVFFQM----LVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVH--CYAVKAGFILDLTV 345
Query: 244 WNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGV 303
N+++ Y K G + A++ F+ + ++V S+ SLI G ++ E+ F MR +G+
Sbjct: 346 QNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGI 405
Query: 304 RPNYVTFVGVLSACVHGGKVQEG-RCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEA 362
RP+ T +GVL+AC H + G C+ + + Y + + + ++D+ + G LD A
Sbjct: 406 RPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICN--ALMDMYTKCGKLDVA 463
Query: 363 MKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQ--ALEPWNDGAYVVLSNIYA 420
++ + M K + + W ++ +G + + +Q + P +LS +
Sbjct: 464 KRVFDTMH-KRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSAC-S 521
Query: 421 NKGMWKEVERIRSSMKEGRLAKVP 444
+ G+ E +++ +SM G +P
Sbjct: 522 HSGLVDEGKQLFNSMSRGDFNVIP 545
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 136/288 (47%), Gaps = 24/288 (8%)
Query: 109 VLKAVCQSFAIELGKQVHSLGVKIGLQ-TNEYCETGFINLYCKSGEFTSARMVFDENPDP 167
+L+ +S + LG+ +H +K L ++ LY E AR VFDE P P
Sbjct: 5 LLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHP 64
Query: 168 KLG--SWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQ 225
++ +W+ +I + A A+ ++ M G P T + AC + + G
Sbjct: 65 RINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKL 124
Query: 226 LHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMH 285
+H+ V + A TD+ + +LVD Y KCG +++A KVF M +R++ +W ++I G+++H
Sbjct: 125 IHSHVNCSDFA--TDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLH 182
Query: 286 GHVNEALECFWCMREA-GVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQ 344
+ + + F MR G+ PN T VG+ A G ++EG K V+G R+
Sbjct: 183 CCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREG-------KAVHGYCTRM- 234
Query: 345 HYGCMVDLLGRAGLLDEAMK--------MVEEMPMKPNSIVWGCLMGA 384
G DL+ + G+LD K V ++ K N + W ++G
Sbjct: 235 --GFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGG 280
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 128/390 (32%), Positives = 203/390 (52%), Gaps = 13/390 (3%)
Query: 42 NCTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGV-- 99
C I++ +V+ I+ + + +WN +I + AL +M A +
Sbjct: 154 KCGRINEAEKVFRRIV-------DRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKE 206
Query: 100 LPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQ--TNEYCETGFINLYCKSGEFTSA 157
PD +TL +LKA + I GKQ+H V+ G ++ ++LY K G SA
Sbjct: 207 RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSA 266
Query: 158 RMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSV 217
R FD+ + + SW+++I G +Q G +A+ +F ++ D + S+
Sbjct: 267 RKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADF 326
Query: 218 GDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTS 277
L+ G Q+ + T +L NS+VDMY KCG +D A K FA M ++V SWT
Sbjct: 327 ALLRQGKQMQALAVKLPSGLETSVL--NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTV 384
Query: 278 LIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVY 337
+I GY HG +++ F+ M + P+ V ++ VLSAC H G ++EG F + +
Sbjct: 385 VITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETH 444
Query: 338 GITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYV 397
GI PR++HY C+VDLLGRAG L EA +++ MP+KPN +W L+ C +G++E+G+ V
Sbjct: 445 GIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEV 504
Query: 398 AKHLQALEPWNDGAYVVLSNIYANKGMWKE 427
K L ++ N YV++SN+Y G W E
Sbjct: 505 GKILLRIDAKNPANYVMMSNLYGQAGYWNE 534
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 171/377 (45%), Gaps = 17/377 (4%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+W+ ++ + + +L L M R G+ P+ +T LKA A+E G Q+H
Sbjct: 74 SWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFC 133
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
+KIG + +++Y K G A VF D L SWNA+I G G A+
Sbjct: 134 LKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKAL 193
Query: 190 RVFVNMRRHGFA--PDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSL 247
F M+ PD T+ SL AC S G + G Q+H + + + + SL
Sbjct: 194 DTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSL 253
Query: 248 VDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNY 307
VD+Y KCG + A K F + E+ + SW+SLI+GYA G EA+ F ++E + +
Sbjct: 254 VDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDS 313
Query: 308 VTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQH--YGCMVDLLGRAGLLDEAMKM 365
++ +++G+ M + L+ +VD+ + GL+DEA K
Sbjct: 314 FALSSIIGVFADFALLRQGK---QMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKC 370
Query: 366 VEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHL-----QALEPWNDGAYVVLSNIYA 420
EM +K + I W ++ YG +G+ + +EP ++ Y+ + + +
Sbjct: 371 FAEMQLK-DVISWTVVITG---YGKHGLGKKSVRIFYEMLRHNIEP-DEVCYLAVLSACS 425
Query: 421 NKGMWKEVERIRSSMKE 437
+ GM KE E + S + E
Sbjct: 426 HSGMIKEGEELFSKLLE 442
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 170/352 (48%), Gaps = 32/352 (9%)
Query: 99 VLPD-RYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSA 157
++P+ R L +L+ + + G QVH +K G N I++YCK E A
Sbjct: 1 MIPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMA 60
Query: 158 RMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSV 217
VFD P+ + SW+A++ G G + ++ +F M R G P+ T + ACG +
Sbjct: 61 YKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120
Query: 218 GDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTS 277
L+ GLQ+H + K + + NSLVDMY KCGR++ A KVF + +R++ SW +
Sbjct: 121 NALEKGLQIHG--FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNA 178
Query: 278 LIVGYAMHGHVNEALECFWCMREAGV--RPNYVTFVGVLSACVHGGKVQEGRCYFDMMKN 335
+I G+ G+ ++AL+ F M+EA + RP+ T +L AC G + G K
Sbjct: 179 MIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAG-------KQ 231
Query: 336 VYGITPRLQHY--------GCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACET 387
++G R + G +VDL + G L A K +++ K I W L+
Sbjct: 232 IHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEK-TMISWSSLI----- 285
Query: 388 YGNVEMGEYVA-----KHLQALEPWNDG-AYVVLSNIYANKGMWKEVERIRS 433
G + GE+V K LQ L D A + ++A+ + ++ +++++
Sbjct: 286 LGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQA 337
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 228 bits (582), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 115/301 (38%), Positives = 177/301 (58%), Gaps = 3/301 (0%)
Query: 150 KSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVS 209
+ GE AR VFD + SW VI + G +A+ +F+ M++ G P T++S
Sbjct: 277 QKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLIS 336
Query: 210 LTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDE 269
+ S C S+ L G Q+H + + D+ + + L+ MY KCG + + +F
Sbjct: 337 ILSVCASLASLHHGKQVHAQLVRCQFD--VDVYVASVLMTMYIKCGELVKSKLIFDRFPS 394
Query: 270 RNVSSWTSLIVGYAMHGHVNEALECFWCMREAG-VRPNYVTFVGVLSACVHGGKVQEGRC 328
+++ W S+I GYA HG EAL+ F M +G +PN VTFV LSAC + G V+EG
Sbjct: 395 KDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLK 454
Query: 329 YFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETY 388
++ M++V+G+ P HY CMVD+LGRAG +EAM+M++ M ++P++ VWG L+GAC T+
Sbjct: 455 IYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTH 514
Query: 389 GNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYSL 448
+++ E+ AK L +EP N G Y++LSN+YA++G W +V +R MK + K P S
Sbjct: 515 SQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSW 574
Query: 449 T 449
T
Sbjct: 575 T 575
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 118/235 (50%), Gaps = 7/235 (2%)
Query: 63 ESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFA-IEL 121
E N A +W +I+ + R AL L +LM + GV P TL +L +VC S A +
Sbjct: 293 ERNDA--SWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISIL-SVCASLASLHH 349
Query: 122 GKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQ 181
GKQVH+ V+ + Y + + +Y K GE ++++FD P + WN++I G +
Sbjct: 350 GKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYAS 409
Query: 182 GGLARDAIRVFVNMRRHGFA-PDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTD 240
GL +A++VF M G P+ VT V+ SAC G ++ GL+++ + +
Sbjct: 410 HGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGV-KPI 468
Query: 241 ILMWNSLVDMYGKCGRMDLAYKVFATMD-ERNVSSWTSLIVGYAMHGHVNEALEC 294
+ +VDM G+ GR + A ++ +M E + + W SL+ H ++ A C
Sbjct: 469 TAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFC 523
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 136/299 (45%), Gaps = 48/299 (16%)
Query: 142 TGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFA 201
T I+ CK G AR +FDE + + +W ++ G Q DA ++F M
Sbjct: 176 TSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM------ 229
Query: 202 PDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAY 261
P+ T VS TS +G +Q G ++ + ++ N+++ G+ G + A
Sbjct: 230 PEK-TEVSWTSML--MGYVQNG-RIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKAR 285
Query: 262 KVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACV--- 318
+VF +M ERN +SW ++I + +G EAL+ F M++ GVRP + T + +LS C
Sbjct: 286 RVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLA 345
Query: 319 ---HGGKV--QEGRCYFDMMKNVYGITPRLQHY------------------------GCM 349
HG +V Q RC FD+ +VY + + Y +
Sbjct: 346 SLHHGKQVHAQLVRCQFDV--DVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSI 403
Query: 350 VDLLGRAGLLDEAMKMVEEMPM----KPNSIVWGCLMGACETYGNVEMGEYVAKHLQAL 404
+ GL +EA+K+ EMP+ KPN + + + AC G VE G + + ++++
Sbjct: 404 ISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESV 462
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 123/317 (38%), Gaps = 85/317 (26%)
Query: 152 GEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLT 211
G+ AR +FD + SWN+++ G + RDA ++F M PD
Sbjct: 31 GKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------PD-------- 76
Query: 212 SACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERN 271
+I+ WN LV Y K G +D A KVF M ERN
Sbjct: 77 ---------------------------RNIISWNGLVSGYMKNGEIDEARKVFDLMPERN 109
Query: 272 VSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVL------SAC-------- 317
V SWT+L+ GY +G V+ A FW M E V +G L AC
Sbjct: 110 VVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPD 169
Query: 318 ---------VHG----GKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMK 364
+HG G+V E R FD M IT + MV G+ +D+A K
Sbjct: 170 KDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVIT-----WTTMVTGYGQNNRVDDARK 224
Query: 365 MVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNI----YA 420
+ + MP K + W ++ G +E E + + + ++P V+ N
Sbjct: 225 IFDVMPEK-TEVSWTSMLMGYVQNGRIEDAEELFE-VMPVKP------VIACNAMISGLG 276
Query: 421 NKGMWKEVERIRSSMKE 437
KG + R+ SMKE
Sbjct: 277 QKGEIAKARRVFDSMKE 293
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 112/247 (45%), Gaps = 20/247 (8%)
Query: 143 GFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAP 202
G ++ Y K+GE AR VFD P+ + SW A++ G G A +F M
Sbjct: 84 GLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVS 143
Query: 203 DGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYK 262
V + +G LQ G C + ++ +I S++ K GR+D A +
Sbjct: 144 WTVML---------IGFLQDGRIDDACKLYEMIPDKDNIAR-TSMIHGLCKEGRVDEARE 193
Query: 263 VFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGK 322
+F M ER+V +WT+++ GY + V++A + F M E V++ +L V G+
Sbjct: 194 IFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSMLMGYVQNGR 249
Query: 323 VQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLM 382
+++ F++M + P + M+ LG+ G + +A ++ + M + N W ++
Sbjct: 250 IEDAEELFEVMP----VKPVIA-CNAMISGLGQKGEIAKARRVFDSMKER-NDASWQTVI 303
Query: 383 GACETYG 389
E G
Sbjct: 304 KIHERNG 310
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 228 bits (581), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 129/382 (33%), Positives = 196/382 (51%), Gaps = 4/382 (1%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN I PR A+ + R P+ T L A + LG Q+H L +
Sbjct: 177 WNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVL 236
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
+ G T+ G I+ Y K + S+ ++F E SW +++ Q A
Sbjct: 237 RSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASV 296
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDM 250
+++ R+ + S+ SAC + L+LG +H + KA I + ++LVDM
Sbjct: 297 LYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHA--HAVKACVERTIFVGSALVDM 354
Query: 251 YGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCM--REAGVRPNYV 308
YGKCG ++ + + F M E+N+ + SLI GYA G V+ AL F M R G PNY+
Sbjct: 355 YGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYM 414
Query: 309 TFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEE 368
TFV +LSAC G V+ G FD M++ YGI P +HY C+VD+LGRAG+++ A + +++
Sbjct: 415 TFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKK 474
Query: 369 MPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEV 428
MP++P VWG L AC +G ++G A++L L+P + G +V+LSN +A G W E
Sbjct: 475 MPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEA 534
Query: 429 ERIRSSMKEGRLAKVPAYSLTT 450
+R +K + K YS T
Sbjct: 535 NTVREELKGVGIKKGAGYSWIT 556
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 171/375 (45%), Gaps = 39/375 (10%)
Query: 52 VYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNA---LRL------------------ 90
V+A I++T L+S P PF N +I Y++L+ P +A LRL
Sbjct: 28 VHARIVKT--LDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQ 85
Query: 91 ----------HVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYC 140
M R GV+P+ +T P KAV GKQ+H+L VK G + +
Sbjct: 86 NGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFV 145
Query: 141 ETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGF 200
++YCK+ AR +FDE P+ L +WNA I G R+AI F+ RR
Sbjct: 146 GCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDG 205
Query: 201 APDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLA 260
P+ +T + +AC L LG+QLH V ++ TD+ + N L+D YGKC ++ +
Sbjct: 206 HPNSITFCAFLNACSDWLHLNLGMQLHGLVL--RSGFDTDVSVCNGLIDFYGKCKQIRSS 263
Query: 261 YKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHG 320
+F M +N SW SL+ Y + +A + R+ V + VLSAC
Sbjct: 264 EIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGM 323
Query: 321 GKVQEGRCYFDMMKNVYGITPRLQHYG-CMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWG 379
++ GR V R G +VD+ G+ G ++++ + +EMP K N +
Sbjct: 324 AGLELGRSIH--AHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK-NLVTRN 380
Query: 380 CLMGACETYGNVEMG 394
L+G G V+M
Sbjct: 381 SLIGGYAHQGQVDMA 395
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 104/220 (47%), Gaps = 4/220 (1%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+W +++ Y + A L++ + V + + VL A +ELG+ +H+
Sbjct: 277 SWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHA 336
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
VK ++ + + +++Y K G + FDE P+ L + N++IGG + G A+
Sbjct: 337 VKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMAL 396
Query: 190 RVFVNM--RRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSL 247
+F M R G P+ +T VSL SAC G ++ G+++ + E ++ +
Sbjct: 397 ALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIE-PGAEHYSCI 455
Query: 248 VDMYGKCGRMDLAYKVFATMD-ERNVSSWTSLIVGYAMHG 286
VDM G+ G ++ AY+ M + +S W +L MHG
Sbjct: 456 VDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHG 495
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 228 bits (580), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 132/414 (31%), Positives = 215/414 (51%), Gaps = 10/414 (2%)
Query: 26 LDSANNPVTLIATQLCNCTHIHQLNQVYA-HILRTHFLESNPAPFNWNNIIRCYTRLEAP 84
L+S+ ++ + NC + +YA + L N + WN+++ + E
Sbjct: 269 LESSPFAISALIDMYSNCGSL-----IYAADVFHQEKLAVNSSVAVWNSMLSGFLINEEN 323
Query: 85 RNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGF 144
AL L + + ++ + D YTL LK + LG QVHSL V G + + +
Sbjct: 324 EAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSIL 383
Query: 145 INLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDG 204
++L+ G A +F P+ + +++ +I G + G A +F + + G D
Sbjct: 384 VDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQ 443
Query: 205 VTMVSLTSACGSVGDLQLGLQLH-TCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKV 263
+ ++ C S+ L G Q+H C+ K ++ + +LVDMY KCG +D +
Sbjct: 444 FIVSNILKVCSSLASLGWGKQIHGLCI---KKGYESEPVTATALVDMYVKCGEIDNGVVL 500
Query: 264 FATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKV 323
F M ER+V SWT +IVG+ +G V EA F M G+ PN VTF+G+LSAC H G +
Sbjct: 501 FDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLL 560
Query: 324 QEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMG 383
+E R + MK+ YG+ P L+HY C+VDLLG+AGL EA +++ +MP++P+ +W L+
Sbjct: 561 EEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLT 620
Query: 384 ACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKE 437
AC T+ N + +A+ L P + Y LSN YA GMW ++ ++R + K+
Sbjct: 621 ACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKK 674
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 179/415 (43%), Gaps = 53/415 (12%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQ 124
P +WN +I + +PR AL V M R G++ D + LP LKA + +GKQ
Sbjct: 201 QPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQ 259
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENP---DPKLGSWNAVIGGLSQ 181
+H VK GL+++ + + I++Y G A VF + + + WN+++ G
Sbjct: 260 LHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLI 319
Query: 182 GGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI 241
A+ + + + + D T+ C + +L+LGLQ+H+ V + D
Sbjct: 320 NEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLV--VVSGYELDY 377
Query: 242 LMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREA 301
++ + LVD++ G + A+K+F + +++ +++ LI G G + A F + +
Sbjct: 378 IVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKL 437
Query: 302 GVRPNYVTFVGVLSAC-----------VHG------------------------GKVQEG 326
G+ + +L C +HG G++ G
Sbjct: 438 GLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNG 497
Query: 327 RCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM---PMKPNSIVWGCLMG 383
FD M + + + ++ G+ G ++EA + +M ++PN + + L+
Sbjct: 498 VVLFDGM-----LERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLS 552
Query: 384 ACETYGNVEMGEYVAKHLQA---LEPWNDGAYVVLSNIYANKGMWKEVERIRSSM 435
AC G +E + +++ LEP+ + Y V+ ++ G+++E + + M
Sbjct: 553 ACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVV-DLLGQAGLFQEANELINKM 606
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 152/382 (39%), Gaps = 40/382 (10%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGV-LPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
W ++ YT P A+ L+ ML + + + VLKA I+LG V+
Sbjct: 74 WTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERI 133
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
K L+ + +++Y K+G A F E P SWN +I G + GL +A+
Sbjct: 134 GKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAV 193
Query: 190 RVF------------------------------VNMRRHGFAPDGVTMVSLTSACGSVGD 219
+F V M+R G DG + AC G
Sbjct: 194 TLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGL 253
Query: 220 LQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMD---ERNVSSWT 276
L +G QLH CV K+ + ++L+DMY CG + A VF +V+ W
Sbjct: 254 LTMGKQLHCCV--VKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWN 311
Query: 277 SLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNV 336
S++ G+ ++ AL + ++ + + T G L C++ ++ G ++ V
Sbjct: 312 SMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVV-V 370
Query: 337 YGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEY 396
G +VDL G + +A K+ +P K + I + L+ C G + Y
Sbjct: 371 SGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNK-DIIAFSGLIRGCVKSGFNSLAFY 429
Query: 397 VAKHLQALEPWNDGAYVVLSNI 418
+ + L L D ++SNI
Sbjct: 430 LFRELIKLGL--DADQFIVSNI 449
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 7/205 (3%)
Query: 118 AIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIG 177
A + G+ + + +K G+ N + I++Y + A VFDE + + +W ++
Sbjct: 20 AFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVS 79
Query: 178 GLSQGGLARDAIRVFVNM-RRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAA 236
G + G AI ++ M A + ++ ACG VGD+QLG+ ++ + K
Sbjct: 80 GYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERI--GKEN 137
Query: 237 ERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFW 296
R D+++ NS+VDMY K GR+ A F + + +SW +LI GY G ++EA+ F
Sbjct: 138 LRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFH 197
Query: 297 CMREAGVRPNYVTFVGVLSACVHGG 321
M + PN V++ ++S V G
Sbjct: 198 RMPQ----PNVVSWNCLISGFVDKG 218
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 34/217 (15%)
Query: 214 CGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVS 273
CG V + G + V K ++ + N+++ MY + A+KVF M ERN+
Sbjct: 15 CGKVQAFKRGESIQAHVI--KQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIV 72
Query: 274 SWTSLIVGYAMHGHVNEALECFWCMREAGVR-PNYVTFVGVLSACVHGGKVQEGRCYFDM 332
+WT+++ GY G N+A+E + M ++ N + VL AC G +Q G ++
Sbjct: 73 TWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYER 132
Query: 333 M--KNVYG----------------------------ITPRLQHYGCMVDLLGRAGLLDEA 362
+ +N+ G + P + ++ +AGL+DEA
Sbjct: 133 IGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEA 192
Query: 363 MKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAK 399
+ + MP +PN + W CL+ G+ E++ +
Sbjct: 193 VTLFHRMP-QPNVVSWNCLISGFVDKGSPRALEFLVR 228
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 228 bits (580), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 132/398 (33%), Positives = 198/398 (49%), Gaps = 38/398 (9%)
Query: 85 RNALRLHVLMLRAGVLP-DRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETG 143
AL L + M + LP D + + LK+ +F LG VH+ VK +N +
Sbjct: 29 EQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCA 88
Query: 144 FINLYCKSGEFTSARMVFDENPD--------------------------------PKLGS 171
+++Y K + AR +FDE P P S
Sbjct: 89 LLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESS 148
Query: 172 WNAVIGGL--SQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTC 229
+NA+I GL ++ G R AI + M F P+ +T+++L SAC ++G +L ++H+
Sbjct: 149 FNAIIKGLVGTEDGSYR-AIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHS- 206
Query: 230 VYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVN 289
Y + + + LV+ YG+CG + VF +M++R+V +W+SLI YA+HG
Sbjct: 207 -YAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAE 265
Query: 290 EALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCM 349
AL+ F M A V P+ + F+ VL AC H G E YF M+ YG+ HY C+
Sbjct: 266 SALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCL 325
Query: 350 VDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWND 409
VD+L R G +EA K+++ MP KP + WG L+GAC YG +E+ E A+ L +EP N
Sbjct: 326 VDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENP 385
Query: 410 GAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
YV+L IY + G +E ER+R MKE + P S
Sbjct: 386 ANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 11/232 (4%)
Query: 66 PAPFNWNNIIRCYTRLE-APRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQ 124
P ++N II+ E A+ + M+ P+ TL ++ A A L K+
Sbjct: 144 PNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKE 203
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGL 184
+HS + ++ + ++G + Y + G ++VFD D + +W+++I + G
Sbjct: 204 IHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGD 263
Query: 185 ARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKA----AERTD 240
A A++ F M PD + +++ AC GL VY + R
Sbjct: 264 AESALKTFQEMELAKVTPDDIAFLNVLKACS-----HAGLADEALVYFKRMQGDYGLRAS 318
Query: 241 ILMWNSLVDMYGKCGRMDLAYKVFATMDER-NVSSWTSLIVGYAMHGHVNEA 291
++ LVD+ + GR + AYKV M E+ +W +L+ +G + A
Sbjct: 319 KDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELA 370
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 103/265 (38%), Gaps = 50/265 (18%)
Query: 168 KLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLT-SACGSVGDLQLGLQL 226
KL S + + G A+ +F+ M P + SL +C + LG +
Sbjct: 11 KLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSV 70
Query: 227 HTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHG 286
H + K+ ++ + +L+DMYGKC + A K+F + +RN W ++I Y G
Sbjct: 71 HA--HSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCG 128
Query: 287 HVNEALECFWCMR---------------------------------EAGVRPNYVTFVGV 313
V EA+E + M E +PN +T + +
Sbjct: 129 KVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLAL 188
Query: 314 LSACVHGGKVQEGRCYFDMMKNVYG------ITPRLQHYGCMVDLLGRAGLLDEAMKMVE 367
+SAC G F ++K ++ I P Q +V+ GR G + + +
Sbjct: 189 VSACSAIGA-------FRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFD 241
Query: 368 EMPMKPNSIVWGCLMGACETYGNVE 392
M + + + W L+ A +G+ E
Sbjct: 242 SMEDR-DVVAWSSLISAYALHGDAE 265
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/445 (30%), Positives = 223/445 (50%), Gaps = 12/445 (2%)
Query: 10 RRCYSVSQRSITQTLLLDSANNPVTLIATQLCNCTHIHQLNQVYAHILRTHFLESNPAPF 69
R + ++ + + LD N + C+C + + +V+ + R +
Sbjct: 225 ERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAR--EVFQKMPRKSLVA------ 276
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
WN++I+ Y ++ + + M+ G P + TL +L A +S + GK +H
Sbjct: 277 -WNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYV 335
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
++ + + Y I+LY K GE A VF + SWN +I G A+
Sbjct: 336 IRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAV 395
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
V+ M G PD VT S+ AC + L+ G Q+H + ++ TD L+ ++L+D
Sbjct: 396 EVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRL--ETDELLLSALLD 453
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
MY KCG A+++F ++ +++V SWT +I Y HG EAL F M++ G++P+ VT
Sbjct: 454 MYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVT 513
Query: 310 FVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
+ VLSAC H G + EG +F M++ YGI P ++HY CM+D+LGRAG L EA +++++
Sbjct: 514 LLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQT 573
Query: 370 P-MKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEV 428
P N+ + L AC + +G+ +A+ L P + Y+VL N+YA+ W
Sbjct: 574 PETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAA 633
Query: 429 ERIRSSMKEGRLAKVPAYSLTTNSD 453
R+R MKE L K P S SD
Sbjct: 634 RRVRLKMKEMGLRKKPGCSWIEMSD 658
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 157/341 (46%), Gaps = 4/341 (1%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WN +I C+ + AL L M +G P+ +L + + A + +E GK++H
Sbjct: 175 SWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKC 234
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
VK G + +EY + +++Y K AR VF + P L +WN++I G G ++ +
Sbjct: 235 VKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCV 294
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
+ M G P T+ S+ AC +L G +H Y ++ DI + SL+D
Sbjct: 295 EILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHG--YVIRSVVNADIYVNCSLID 352
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
+Y KCG +LA VF+ + SW +I Y G+ +A+E + M GV+P+ VT
Sbjct: 353 LYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVT 412
Query: 310 FVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
F VL AC +++G+ + T L ++D+ + G EA ++ +
Sbjct: 413 FTSVLPACSQLAALEKGKQIHLSISESRLETDELL-LSALLDMYSKCGNEKEAFRIFNSI 471
Query: 370 PMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDG 410
P K + + W ++ A ++G Y +Q DG
Sbjct: 472 P-KKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDG 511
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 186/403 (46%), Gaps = 43/403 (10%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGV-LPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
WN+++ Y++ + L + +L + +PD +T P V+KA LG+ +H+L
Sbjct: 74 WNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLV 133
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
VK G + + + +Y K F ++ VFDE P+ + SWN VI Q G A A+
Sbjct: 134 VKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKAL 193
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLH-TCVYHAKAAERTDILMWNSLV 248
+F M GF P+ V++ SAC + L+ G ++H CV K D + ++LV
Sbjct: 194 ELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCV---KKGFELDEYVNSALV 250
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYV 308
DMYGKC +++A +VF M +++ +W S+I GY G +E M G RP+
Sbjct: 251 DMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQT 310
Query: 309 TFVGVLSACVHGGKVQEGR-----------------------CYF-----DMMKNVYGIT 340
T +L AC + G+ YF ++ + V+ T
Sbjct: 311 TLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKT 370
Query: 341 PR--LQHYGCMVDLLGRAGLLDEAMKMVEEMP---MKPNSIVWGCLMGACETYGNVEMGE 395
+ + + M+ G +A+++ ++M +KP+ + + ++ AC +E G+
Sbjct: 371 QKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGK 430
Query: 396 YVAKHLQALEPWNDGAYVVLS---NIYANKGMWKEVERIRSSM 435
+ HL E + ++LS ++Y+ G KE RI +S+
Sbjct: 431 QI--HLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSI 471
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 131/266 (49%), Gaps = 15/266 (5%)
Query: 123 KQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPK--LGSWNAVIGGLS 180
K VH + +GL+ + IN+Y + SAR VF EN D + + WN+++ G S
Sbjct: 24 KLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVF-ENFDIRSDVYIWNSLMSGYS 82
Query: 181 QGGLARDAIRVFVNMRRHGF-APDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERT 239
+ + D + VF + PD T ++ A G++G LG +HT V K+
Sbjct: 83 KNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLV--VKSGYVC 140
Query: 240 DILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMR 299
D+++ +SLV MY K + + +VF M ER+V+SW ++I + G +ALE F M
Sbjct: 141 DVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRME 200
Query: 300 EAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHY--GCMVDLLGRAG 357
+G PN V+ +SAC ++ G+ ++ + L Y +VD+ G+
Sbjct: 201 SSGFEPNSVSLTVAISACSRLLWLERGK---EIHRKCVKKGFELDEYVNSALVDMYGKCD 257
Query: 358 LLDEAMKMVEEMPMKP----NSIVWG 379
L+ A ++ ++MP K NS++ G
Sbjct: 258 CLEVAREVFQKMPRKSLVAWNSMIKG 283
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 112/307 (36%), Positives = 175/307 (57%), Gaps = 2/307 (0%)
Query: 148 YCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHG-FAPDGVT 206
Y G+ + VFD+ P+ + SWN +I G +Q G + + F M G P+ T
Sbjct: 131 YANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDAT 190
Query: 207 MVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFAT 266
M + SAC +G G +H + D+ + N+L+DMYGKCG +++A +VF
Sbjct: 191 MTLVLSACAKLGAFDFGKWVHK-YGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKG 249
Query: 267 MDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEG 326
+ R++ SW ++I G A HGH EAL F M+ +G+ P+ VTFVGVL AC H G V++G
Sbjct: 250 IKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDG 309
Query: 327 RCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACE 386
YF+ M + I P ++H GC+VDLL RAG L +A++ + +MP+K ++++W L+GA +
Sbjct: 310 LAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASK 369
Query: 387 TYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAY 446
Y V++GE + L LEP N +V+LSNIY + G + + R++ +M++ K
Sbjct: 370 VYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGV 429
Query: 447 SLTTNSD 453
S D
Sbjct: 430 SWIETDD 436
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 108/258 (41%), Gaps = 43/258 (16%)
Query: 134 LQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFV 193
++ N T IN Y + + SAR FD +P+ + WN +I G + G +A +F
Sbjct: 55 VEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFD 114
Query: 194 NMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGK 253
M C D++ WN++++ Y
Sbjct: 115 QM-----------------PC------------------------RDVMSWNTVLEGYAN 133
Query: 254 CGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAG-VRPNYVTFVG 312
G M+ +VF M ERNV SW LI GYA +G V+E L F M + G V PN T
Sbjct: 134 IGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTL 193
Query: 313 VLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMK 372
VLSAC G G+ + + + ++D+ G+ G ++ AM++ + + +
Sbjct: 194 VLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIK-R 252
Query: 373 PNSIVWGCLMGACETYGN 390
+ I W ++ +G+
Sbjct: 253 RDLISWNTMINGLAAHGH 270
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 117/272 (43%), Gaps = 36/272 (13%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAG-VLPDRYTLPIVLKAVCQSFAIELGKQVHS 127
F+WN +I+ Y + L M+ G V+P+ T+ +VL A + A + GK VH
Sbjct: 153 FSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHK 212
Query: 128 LGVKIGL-QTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLAR 186
G +G + + + I++Y K G A VF L SWN +I GL+ G
Sbjct: 213 YGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGT 272
Query: 187 DAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHT----------------CV 230
+A+ +F M+ G +PD VT V + AC +G ++ GL CV
Sbjct: 273 EALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCV 332
Query: 231 --------YHAKAAE-------RTDILMWNSLV---DMYGKCGRMDLAYKVFATMDERNV 272
+ +A E + D ++W +L+ +Y K ++A + ++ RN
Sbjct: 333 VDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNP 392
Query: 273 SSWTSLIVGYAMHGHVNEALECFWCMREAGVR 304
+++ L Y G ++A MR+ G +
Sbjct: 393 ANFVMLSNIYGDAGRFDDAARLKVAMRDTGFK 424
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/353 (37%), Positives = 185/353 (52%), Gaps = 2/353 (0%)
Query: 101 PDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMV 160
PD + V A A+ G QVH +K GL N + + I+LY K G A V
Sbjct: 474 PDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKV 533
Query: 161 FDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDL 220
F + +WN++I S+ L +I +F M G PD V++ S+ A S L
Sbjct: 534 FTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASL 593
Query: 221 QLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIV 280
G LH Y + +D + N+L+DMY KCG A +F M +++ +W +I
Sbjct: 594 LKGKSLHG--YTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIY 651
Query: 281 GYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGIT 340
GY HG AL F M++AG P+ VTF+ ++SAC H G V+EG+ F+ MK YGI
Sbjct: 652 GYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIE 711
Query: 341 PRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKH 400
P ++HY MVDLLGRAGLL+EA ++ MP++ +S +W CL+ A T+ NVE+G A+
Sbjct: 712 PNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEK 771
Query: 401 LQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYSLTTNSD 453
L +EP YV L N+Y G+ E ++ MKE L K P S SD
Sbjct: 772 LLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSD 824
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 181/409 (44%), Gaps = 53/409 (12%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN ++ Y + +AL L M + VLPD +TL V+ GK VH+
Sbjct: 341 WNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELF 400
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
K +Q+ E+ + LY K G A +VF + + +W ++I GL + G ++A++
Sbjct: 401 KRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALK 460
Query: 191 VFVNMR--RHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
VF +M+ PD M S+T+AC + L+ GLQ+H + K ++ + +SL+
Sbjct: 461 VFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSM--IKTGLVLNVFVGSSLI 518
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYV 308
D+Y KCG ++A KVF +M N+ +W S+I Y+ + +++ F M G+ P+ V
Sbjct: 519 DLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSV 578
Query: 309 TFVGVLSA-----------CVHGGKVQEG----------------RCYFDMMKNVYGITP 341
+ VL A +HG ++ G +C F K I
Sbjct: 579 SITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFS--KYAENIFK 636
Query: 342 RLQH------------YGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYG 389
++QH YG D + L DE K E P+ + + L+ AC G
Sbjct: 637 KMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGES----PDDVTFLSLISACNHSG 692
Query: 390 NVEMGEYVAKHLQ---ALEPWNDGAYVVLSNIYANKGMWKEVERIRSSM 435
VE G+ + + ++ +EP N Y + ++ G+ +E +M
Sbjct: 693 FVEEGKNIFEFMKQDYGIEP-NMEHYANMVDLLGRAGLLEEAYSFIKAM 740
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 154/334 (46%), Gaps = 29/334 (8%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN +I + ++L L++L V + L A QS G+Q+H V
Sbjct: 240 WNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVV 299
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
K+GL + Y T +++Y K G A VF D +L WNA++ ++ A+
Sbjct: 300 KMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALD 359
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDM 250
+F MR+ PD T+ ++ S C +G G +H ++ + I ++L+ +
Sbjct: 360 LFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTI--ESALLTL 417
Query: 251 YGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMR--EAGVRPNYV 308
Y KCG AY VF +M+E+++ +W SLI G +G EAL+ F M+ + ++P+
Sbjct: 418 YSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSD 477
Query: 309 TFVGVLSAC-----------VHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAG 357
V +AC VHG ++ G ++ NV+ + ++DL + G
Sbjct: 478 IMTSVTNACAGLEALRFGLQVHGSMIKTG-----LVLNVFVGSS-------LIDLYSKCG 525
Query: 358 LLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNV 391
L + A+K+ M + N + W ++ +C + N+
Sbjct: 526 LPEMALKVFTSMSTE-NMVAWNSMI-SCYSRNNL 557
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 161/361 (44%), Gaps = 14/361 (3%)
Query: 35 LIATQLCN----CTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRL 90
IAT L N C + QV+ ++ S WN++I Y + + +
Sbjct: 96 FIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGC 155
Query: 91 HVLMLRAGVLPDRYTLPIVLKAVCQ--SFAIELGKQVHSLGVKIGLQTNEYCETGFINLY 148
ML GV PD ++L IV+ +C+ +F E GKQ+H ++ L T+ + +T I++Y
Sbjct: 156 FRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMY 215
Query: 149 CKSGEFTSARMVFDENPDPK-LGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTM 207
K G A VF E D + WN +I G G+ ++ +++ + + +
Sbjct: 216 FKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSF 275
Query: 208 VSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATM 267
AC + G Q+H V K D + SL+ MY KCG + A VF+ +
Sbjct: 276 TGALGACSQSENSGFGRQIHCDV--VKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCV 333
Query: 268 DERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGR 327
++ + W +++ YA + + AL+ F MR+ V P+ T V+S C G G+
Sbjct: 334 VDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGK 393
Query: 328 -CYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLM-GAC 385
+ ++ K T ++ ++ L + G +A + + M K + + WG L+ G C
Sbjct: 394 SVHAELFKRPIQSTSTIE--SALLTLYSKCGCDPDAYLVFKSMEEK-DMVAWGSLISGLC 450
Query: 386 E 386
+
Sbjct: 451 K 451
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 111/219 (50%), Gaps = 2/219 (0%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN++I CY+R P ++ L LML G+ PD ++ VL A+ + ++ GK +H +
Sbjct: 545 WNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTL 604
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
++G+ ++ + + I++Y K G A +F + L +WN +I G G A+
Sbjct: 605 RLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALS 664
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDM 250
+F M++ G +PD VT +SL SAC G ++ G + + E ++ + ++VD+
Sbjct: 665 LFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIE-PNMEHYANMVDL 723
Query: 251 YGKCGRMDLAYKVFATMD-ERNVSSWTSLIVGYAMHGHV 288
G+ G ++ AY M E + S W L+ H +V
Sbjct: 724 LGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNV 762
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 12/234 (5%)
Query: 104 YTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDE 163
+T P +LKA + GK +H V +G + + + T +N+Y K G A VFD
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 164 NPDPKLG-------SWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGS 216
+ G WN++I G + ++ + F M G PD ++ + S
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 217 VGDL--QLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATM-DERNVS 273
G+ + G Q+H + + + TD + +L+DMY K G A++VF + D+ NV
Sbjct: 181 EGNFRREEGKQIHG--FMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVV 238
Query: 274 SWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGR 327
W +IVG+ G +L+ + + V+ +F G L AC GR
Sbjct: 239 LWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGR 292
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 179/300 (59%), Gaps = 2/300 (0%)
Query: 148 YCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTM 207
+ + GE + AR VFD D +W +I + G +A+ +F M++ G P ++
Sbjct: 275 FGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSL 334
Query: 208 VSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATM 267
+S+ S C ++ LQ G Q+H + + + D+ + + L+ MY KCG + A VF
Sbjct: 335 ISILSVCATLASLQYGRQVHAHLVRCQFDD--DVYVASVLMTMYVKCGELVKAKLVFDRF 392
Query: 268 DERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGR 327
+++ W S+I GYA HG EAL+ F M +G PN VT + +L+AC + GK++EG
Sbjct: 393 SSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGL 452
Query: 328 CYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACET 387
F+ M++ + +TP ++HY C VD+LGRAG +D+AM+++E M +KP++ VWG L+GAC+T
Sbjct: 453 EIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKT 512
Query: 388 YGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
+ +++ E AK L EP N G YV+LS+I A++ W +V +R +M+ ++K P S
Sbjct: 513 HSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCS 572
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 115/224 (51%), Gaps = 4/224 (1%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFA-IELGKQVHSL 128
W +I+ Y R AL L M + GV P +L +L +VC + A ++ G+QVH+
Sbjct: 298 TWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISIL-SVCATLASLQYGRQVHAH 356
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
V+ + Y + + +Y K GE A++VFD + WN++I G + GL +A
Sbjct: 357 LVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEA 416
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
+++F M G P+ VT++++ +AC G L+ GL++ + +K + ++ V
Sbjct: 417 LKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESM-ESKFCVTPTVEHYSCTV 475
Query: 249 DMYGKCGRMDLAYKVFATMDER-NVSSWTSLIVGYAMHGHVNEA 291
DM G+ G++D A ++ +M + + + W +L+ H ++ A
Sbjct: 476 DMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLA 519
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 128/301 (42%), Gaps = 55/301 (18%)
Query: 142 TGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFA 201
T I C+ G AR++FDE + + +W +I G Q A ++F M
Sbjct: 176 TNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVM------ 229
Query: 202 PDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAK----AAERTDILMWNSLVDMYGKCGRM 257
P+ T VS TS + LG L + A+ ++ N+++ +G+ G +
Sbjct: 230 PEK-TEVSWTS-------MLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEI 281
Query: 258 DLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSAC 317
A +VF M++R+ ++W +I Y G EAL+ F M++ GVRP++ + + +LS C
Sbjct: 282 SKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVC 341
Query: 318 VHGGKVQEG--------RCYFDMMKNVYGITPRLQHY----------------------- 346
+Q G RC FD +VY + + Y
Sbjct: 342 ATLASLQYGRQVHAHLVRCQFD--DDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIM 399
Query: 347 -GCMVDLLGRAGLLDEAMKMVEEMPMK---PNSIVWGCLMGACETYGNVEMGEYVAKHLQ 402
++ GL +EA+K+ EMP PN + ++ AC G +E G + + ++
Sbjct: 400 WNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESME 459
Query: 403 A 403
+
Sbjct: 460 S 460
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 110/264 (41%), Gaps = 59/264 (22%)
Query: 145 INLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDG 204
I+ + G+ AR FD +GSWN+++ G GL ++A ++F M
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM--------- 74
Query: 205 VTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVF 264
+ER +++ WN LV Y K + A VF
Sbjct: 75 -------------------------------SER-NVVSWNGLVSGYIKNRMIVEARNVF 102
Query: 265 ATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQ 324
M ERNV SWT+++ GY G V EA FW M E N V++ + + G++
Sbjct: 103 ELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRID 158
Query: 325 EGRCYFDMM--KNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLM 382
+ R +DMM K+V T M+ L R G +DEA + +EM + N + W ++
Sbjct: 159 KARKLYDMMPVKDVVASTN-------MIGGLCREGRVDEARLIFDEMRER-NVVTWTTMI 210
Query: 383 GACETYGNVEMGEYVAKHLQALEP 406
V+ VA+ L + P
Sbjct: 211 TGYRQNNRVD----VARKLFEVMP 230
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 121/287 (42%), Gaps = 25/287 (8%)
Query: 142 TGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFA 201
T + Y + G A +F P+ SW + GGL G A +++
Sbjct: 114 TAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLY--------- 164
Query: 202 PDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAY 261
D + + + ++ +G L ++ +++ W +++ Y + R+D+A
Sbjct: 165 -DMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVAR 223
Query: 262 KVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGG 321
K+F M E+ SWTS+++GY + G + +A E F M V VG G
Sbjct: 224 KLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEV----G 279
Query: 322 KVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMP---MKPNSIVW 378
++ + R FD+M++ T R M+ R G EA+ + +M ++P+
Sbjct: 280 EISKARRVFDLMEDRDNATWR-----GMIKAYERKGFELEALDLFAQMQKQGVRPSFPSL 334
Query: 379 GCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYV--VLSNIYANKG 423
++ C T +++ G V HL + ++D YV VL +Y G
Sbjct: 335 ISILSVCATLASLQYGRQVHAHLVRCQ-FDDDVYVASVLMTMYVKCG 380
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 110/249 (44%), Gaps = 24/249 (9%)
Query: 143 GFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAP 202
G ++ Y K+ AR VF+ P+ + SW A++ G Q G+ +A +F M
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER---- 139
Query: 203 DGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYK 262
+ V+ + G + +L+ + D++ +++ + GR+D A
Sbjct: 140 NEVSWTVMFGGLIDDGRIDKARKLYDMM------PVKDVVASTNMIGGLCREGRVDEARL 193
Query: 263 VFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGK 322
+F M ERNV +WT++I GY + V+ A + F M E V++ +L G+
Sbjct: 194 IFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPE----KTEVSWTSMLLGYTLSGR 249
Query: 323 VQEGRCYFDMMKNVYGITPRLQHYGC--MVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGC 380
+++ +F++M P C M+ G G + +A ++ + M + N+ W
Sbjct: 250 IEDAEEFFEVM-------PMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNA-TWRG 301
Query: 381 LMGACETYG 389
++ A E G
Sbjct: 302 MIKAYERKG 310
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 156/493 (31%), Positives = 250/493 (50%), Gaps = 54/493 (10%)
Query: 11 RCYSVSQRSITQTLLLDSAN-----NPVTLIATQLCNCTHIHQLNQVY--AHILRTHFLE 63
R Y++ + S + L+ N + +L+ N IHQL+ + + L H +
Sbjct: 13 RSYTIIKHSSCYSTLVSDGNIFSIQHFQSLMQKYESNLKIIHQLHSHFTTSGFLLLHQKQ 72
Query: 64 SNPAPFNWNNIIRCYTRLEAPRNAL-------RLHVLMLRAGVLP--DRYTLPIVLKAVC 114
++ F +N ++RCY+ E P +A RLH L LP D +T +LKA
Sbjct: 73 NSGKLFLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASS 132
Query: 115 QSF--AIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSW 172
++ LG +H L +K+G +++ Y +T + +Y G A VFDE P+ +W
Sbjct: 133 NPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTW 192
Query: 173 NAVIGGLSQ--------------------------GGLAR-----DAIRVFVNMRR-HGF 200
N +I GL+ G AR +AI +F M
Sbjct: 193 NVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAI 252
Query: 201 APDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLA 260
P+ +T++++ A ++GDL++ +H V + DI + NSL+D Y KCG + A
Sbjct: 253 KPNEITILAILPAVWNLGDLKMCGSVHAYV-GKRGFVPCDIRVTNSLIDAYAKCGCIQSA 311
Query: 261 YKVFATMD--ERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACV 318
+K F + +N+ SWT++I +A+HG EA+ F M G++PN VT + VL+AC
Sbjct: 312 FKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACS 371
Query: 319 HGGKVQEGRC-YFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIV 377
HGG +E +F+ M N Y ITP ++HYGC+VD+L R G L+EA K+ E+P++ ++V
Sbjct: 372 HGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVV 431
Query: 378 WGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKE 437
W L+GAC Y + E+ E V + L LE + G YV++SNI+ G + + +R R M
Sbjct: 432 WRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDV 491
Query: 438 GRLAKVPAYSLTT 450
+AK+P +S T
Sbjct: 492 RGVAKLPGHSQVT 504
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 195/361 (54%), Gaps = 3/361 (0%)
Query: 77 CYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQT 136
C+ + E P +L M+ + PD + LP K+ ++G+ VH L +K G
Sbjct: 90 CFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDA 149
Query: 137 NEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMR 196
+ + + +++Y K GE AR +FDE P + +W+ ++ G +Q G +A+ +F
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209
Query: 197 RHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGR 256
A + + S+ S C + L+LG Q+H + + + SLV +Y KCG
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGS--SLVSLYSKCGV 267
Query: 257 MDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSA 316
+ AY+VF + +N+ W +++ YA H H + +E F M+ +G++PN++TF+ VL+A
Sbjct: 268 PEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNA 327
Query: 317 CVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSI 376
C H G V EGR YFD MK I P +HY +VD+LGRAG L EA++++ MP+ P
Sbjct: 328 CSHAGLVDEGRYYFDQMKESR-IEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTES 386
Query: 377 VWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMK 436
VWG L+ +C + N E+ + A + L P + G ++ LSN YA G +++ + R ++
Sbjct: 387 VWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLR 446
Query: 437 E 437
+
Sbjct: 447 D 447
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 145/353 (41%), Gaps = 46/353 (13%)
Query: 122 GKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQ 181
G Q+H VK GL IN Y KS +R F+++P +W+++I +Q
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93
Query: 182 GGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI 241
L ++ M PD + S T +C + +G +H C+ K D+
Sbjct: 94 NELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVH-CL-SMKTGYDADV 151
Query: 242 LMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREA 301
+ +SLVDMY KCG + A K+F M +RNV +W+ ++ GYA G EAL W +EA
Sbjct: 152 FVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEAL---WLFKEA 208
Query: 302 ---GVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGL 358
+ N +F V+S C + ++ GR + +V L + G+
Sbjct: 209 LFENLAVNDYSFSSVISVCANSTLLELGR-QIHGLSIKSSFDSSSFVGSSLVSLYSKCGV 267
Query: 359 LDEAMKMVEEMP----------------------------------MKPNSIVWGCLMGA 384
+ A ++ E+P MKPN I + ++ A
Sbjct: 268 PEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNA 327
Query: 385 CETYGNVEMGEYVAKHLQA--LEPWNDGAYVVLSNIYANKGMWKEVERIRSSM 435
C G V+ G Y ++ +EP D Y L ++ G +E + ++M
Sbjct: 328 CSHAGLVDEGRYYFDQMKESRIEP-TDKHYASLVDMLGRAGRLQEALEVITNM 379
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 128/371 (34%), Positives = 196/371 (52%), Gaps = 10/371 (2%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
WN +I Y + + ++A+ ++ M GV PD +T +L S +++ + V +
Sbjct: 356 TWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLL---ATSLDLDVLEMVQACI 412
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
+K GL + I+ Y K+G+ A ++F+ + L SWNA+I G G + +
Sbjct: 413 IKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGL 472
Query: 190 RVFVNMRRHG--FAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSL 247
F + PD T+ +L S C S L LG Q H Y + + + L+ N+L
Sbjct: 473 ERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHA--YVLRHGQFKETLIGNAL 530
Query: 248 VDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAG-VRPN 306
++MY +CG + + +VF M E++V SW SLI Y+ HG A+ + M++ G V P+
Sbjct: 531 INMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPD 590
Query: 307 YVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMV 366
TF VLSAC H G V+EG F+ M +G+ + H+ C+VDLLGRAG LDEA +V
Sbjct: 591 AATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLV 650
Query: 367 E--EMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGM 424
+ E + VW L AC +G++++G+ VAK L E + YV LSNIYA GM
Sbjct: 651 KISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGM 710
Query: 425 WKEVERIRSSM 435
WKE E R ++
Sbjct: 711 WKEAEETRRAI 721
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 143/312 (45%), Gaps = 14/312 (4%)
Query: 94 MLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGE 153
ML A + P T V+ + C A +G QVH L +K G + + +Y +
Sbjct: 282 MLEASLRPTDLTFVSVMGS-CSCAA--MGHQVHGLAIKTGYEKYTLVSNATMTMYSSFED 338
Query: 154 FTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSA 213
F +A VF+ + L +WN +I +Q L + A+ V+ M G PD T SL +
Sbjct: 339 FGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLAT 398
Query: 214 CGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVS 273
+ L++ + C+ + + +I N+L+ Y K G+++ A +F +N+
Sbjct: 399 SLDLDVLEM---VQACIIKFGLSSKIEI--SNALISAYSKNGQIEKADLLFERSLRKNLI 453
Query: 274 SWTSLIVGYAMHGHVNEALECFWCMREAGVR--PNYVTFVGVLSACVHGGKVQEG-RCYF 330
SW ++I G+ +G E LE F C+ E+ VR P+ T +LS CV + G + +
Sbjct: 454 SWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHA 513
Query: 331 DMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGN 390
+++ +G ++++ + G + ++++ +M K + + W L+ A +G
Sbjct: 514 YVLR--HGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEK-DVVSWNSLISAYSRHGE 570
Query: 391 VEMGEYVAKHLQ 402
E K +Q
Sbjct: 571 GENAVNTYKTMQ 582
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 158/396 (39%), Gaps = 69/396 (17%)
Query: 63 ESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVL-PDRYTLPIVLKAVCQSFAIEL 121
E++ N N + TR RNAL+L + R L PD+Y++ + +
Sbjct: 16 ENSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIF 75
Query: 122 GKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDP-------------K 168
G QVH ++ GL + + ++LY + G S + FDE +P K
Sbjct: 76 GGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFK 135
Query: 169 LGS-------------------WNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVS 209
LG WNA+I G + G ++ +F M + G D +
Sbjct: 136 LGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFAT 195
Query: 210 LTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMD- 268
+ S C G L G Q+H+ V A + ++ N+L+ MY C + A VF D
Sbjct: 196 ILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVV--NALITMYFNCQVVVDACLVFEETDV 252
Query: 269 -ERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSAC--------VH 319
R+ ++ +I G A +E+L F M EA +RP +TFV V+ +C VH
Sbjct: 253 AVRDQVTFNVVIDGLAGFKR-DESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVH 311
Query: 320 GGKVQEGRCYFDMMKNV----------YGITPR---------LQHYGCMVDLLGRAGLLD 360
G ++ G + ++ N +G + L + M+ +A L
Sbjct: 312 GLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGK 371
Query: 361 EAMKMVEEMPM---KPNSIVWGCLMGACETYGNVEM 393
AM + + M + KP+ +G L+ +EM
Sbjct: 372 SAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEM 407
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 142/321 (44%), Gaps = 28/321 (8%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN +I ++ L M + GV D++ +L ++C +++ GKQVHSL +
Sbjct: 158 WNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATIL-SMCDYGSLDFGKQVHSLVI 216
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLG--SWNAVIGGLSQGGLARD- 187
K G I +Y A +VF+E ++N VI GL+ G RD
Sbjct: 217 KAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA--GFKRDE 274
Query: 188 AIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSL 247
++ VF M P +T VS+ +C +G Q+H + T L+ N+
Sbjct: 275 SLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVHGLAIKTGYEKYT--LVSNAT 329
Query: 248 VDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNY 307
+ MY A+KVF +++E+++ +W ++I Y A+ + M GV+P+
Sbjct: 330 MTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDE 389
Query: 308 VTFVGVLSACVHGGKVQEGRCYFDMMKNV------YGITPRLQHYGCMVDLLGRAGLLDE 361
TF +L+ + D+++ V +G++ +++ ++ + G +++
Sbjct: 390 FTFGSLLATSLD----------LDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEK 439
Query: 362 AMKMVEEMPMKPNSIVWGCLM 382
A ++ E ++ N I W ++
Sbjct: 440 A-DLLFERSLRKNLISWNAII 459
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 225 bits (573), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 106/274 (38%), Positives = 168/274 (61%), Gaps = 2/274 (0%)
Query: 167 PKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQL 226
P + SW A+ G S+ G R+A++VF+ M+ G P+ TM +L G + L G ++
Sbjct: 359 PNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEV 418
Query: 227 HTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHG 286
H + + D + +LVDMYGK G + A ++F + ++++SW +++GYAM G
Sbjct: 419 HG--FCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFG 476
Query: 287 HVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHY 346
E + F M EAG+ P+ +TF VLS C + G VQEG YFD+M++ YGI P ++H
Sbjct: 477 RGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHC 536
Query: 347 GCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEP 406
CMVDLLGR+G LDEA ++ M +KP++ +WG + +C+ + ++E+ E K LQ LEP
Sbjct: 537 SCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEP 596
Query: 407 WNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRL 440
N Y+++ N+Y+N W++VERIR+ M+ R+
Sbjct: 597 HNSANYMMMINLYSNLNRWEDVERIRNLMRNNRV 630
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 138/359 (38%), Gaps = 73/359 (20%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN I+ R A+ L M +G T+ +L+ G+Q+H +
Sbjct: 57 WNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVL 116
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAV--------------- 175
++GL++N I +Y ++G+ +R VF+ D L SWN++
Sbjct: 117 RLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIG 176
Query: 176 --------------------IGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACG 215
+ G + GL++DAI V M+ G P ++ SL A
Sbjct: 177 LLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVA 236
Query: 216 SVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSW 275
G L+LG +H Y + D+ + +L+DMY K G + A VF MD +N+ +W
Sbjct: 237 EPGHLKLGKAIHG--YILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAW 294
Query: 276 TSLI-----------------------------------VGYAMHGHVNEALECFWCMRE 300
SL+ GYA G +AL+ M+E
Sbjct: 295 NSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKE 354
Query: 301 AGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLL 359
GV PN V++ + S C G + F M+ G+ P ++ +LG LL
Sbjct: 355 KGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQE-EGVGPNAATMSTLLKILGCLSLL 412
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 112/240 (46%), Gaps = 4/240 (1%)
Query: 121 LGKQVHSLGVKIGLQTNEY-CETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGL 179
LG +H +K GL ++ + + Y + A +FDE P +WN ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 180 SQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERT 239
+ G A+ +F M+ G TMV L C + G Q+H Y + +
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHG--YVLRLGLES 122
Query: 240 DILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMR 299
++ M NSL+ MY + G+++L+ KVF +M +RN+SSW S++ Y G+V++A+ M
Sbjct: 123 NVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEME 182
Query: 300 EAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLL 359
G++P+ VT+ +LS G ++ M+ + G+ P ++ + G L
Sbjct: 183 ICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ-IAGLKPSTSSISSLLQAVAEPGHL 241
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 96/225 (42%), Gaps = 46/225 (20%)
Query: 222 LGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVG 281
LGL +H + + + +D + ++ + YG+C + A K+F M +R+ +W +++
Sbjct: 5 LGLTIHGGLIK-RGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMV 63
Query: 282 YAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSAC-----------VHG---------- 320
G+ +A+E F M+ +G + T V +L C +HG
Sbjct: 64 NLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESN 123
Query: 321 --------------GKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMV 366
GK++ R F+ MK+ L + ++ + G +D+A+ ++
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMKD-----RNLSSWNSILSSYTKLGYVDDAIGLL 178
Query: 367 EEMP---MKPNSIVWGCLMGACETYGNVEMGEYVAKHLQ--ALEP 406
+EM +KP+ + W L+ + G + V K +Q L+P
Sbjct: 179 DEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKP 223
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 225 bits (573), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 201/384 (52%), Gaps = 7/384 (1%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WN +I YT + L LML G PD +T +L+A +E+ ++H L
Sbjct: 181 SWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLA 240
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQ-GGLARDA 188
+K+G + +N Y K G +A + + L S A+I G SQ DA
Sbjct: 241 IKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDA 300
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAE-RTDILMWNSL 247
+F +M R D V + S+ C ++ + +G Q+H + K+++ R D+ + NSL
Sbjct: 301 FDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHG--FALKSSQIRFDVALGNSL 358
Query: 248 VDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNY 307
+DMY K G ++ A F M E++V SWTSLI GY HG+ +A++ + M ++PN
Sbjct: 359 IDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPND 418
Query: 308 VTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMV- 366
VTF+ +LSAC H G+ + G +D M N +GI R +H C++D+L R+G L+EA ++
Sbjct: 419 VTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIR 478
Query: 367 -EEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMW 425
+E + +S WG + AC +GNV++ + A L ++EP Y+ L+++YA G W
Sbjct: 479 SKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAW 538
Query: 426 KEVERIRSSMKE-GRLAKVPAYSL 448
R MKE G K P YSL
Sbjct: 539 DNALNTRKLMKESGSCNKAPGYSL 562
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 98/194 (50%), Gaps = 2/194 (1%)
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGL 184
+H + G +N + I+LY K G+ AR +FD + SW A+I S+ G
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 185 ARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMW 244
DA+ +F M R + T S+ +C +G L+ G+Q+H V A ++++
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCA--GNLIVR 151
Query: 245 NSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVR 304
++L+ +Y +CG+M+ A F +M ER++ SW ++I GY + + + F M G +
Sbjct: 152 SALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKK 211
Query: 305 PNYVTFVGVLSACV 318
P+ TF +L A +
Sbjct: 212 PDCFTFGSLLRASI 225
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 155/360 (43%), Gaps = 37/360 (10%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+W +I ++R +AL L M R V +++T VLK+ ++ G Q+H
Sbjct: 80 SWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSV 139
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
K N + ++LY + G+ AR+ FD + L SWNA+I G + A +
Sbjct: 140 EKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSF 199
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
+F M G PD T SL A V L++ +LH + ++ SLV+
Sbjct: 200 SLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALI--RSLVN 257
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGH-VNEALECFWCMREAGVRPNYV 308
Y KCG + A+K+ +R++ S T+LI G++ + ++A + F M + + V
Sbjct: 258 AYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEV 317
Query: 309 TFVGVLSAC-----------VHGGKVQEGRCYFDM-----MKNVYGITPRLQH------- 345
+L C +HG ++ + FD+ + ++Y + ++
Sbjct: 318 VVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEE 377
Query: 346 --------YGCMVDLLGRAGLLDEAMKMVEEMP---MKPNSIVWGCLMGACETYGNVEMG 394
+ ++ GR G ++A+ + M +KPN + + L+ AC G E+G
Sbjct: 378 MKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELG 437
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 239 TDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCM 298
+++ + + L+D+Y K G + A K+F + +R+V SWT++I ++ G+ +AL F M
Sbjct: 45 SNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEM 104
Query: 299 REAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYG------CMVDL 352
V+ N T+ VL +C G ++EG ++G + G ++ L
Sbjct: 105 HREDVKANQFTYGSVLKSCKDLGCLKEGM-------QIHGSVEKGNCAGNLIVRSALLSL 157
Query: 353 LGRAGLLDEAMKMVEEMPMKP----NSIVWGCLMGAC 385
R G ++EA + M + N+++ G AC
Sbjct: 158 YARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANAC 194
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 110/304 (36%), Positives = 179/304 (58%), Gaps = 3/304 (0%)
Query: 145 INLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHG-FAPD 203
I+ Y K G A+ +FD+ P + ++N+++ G Q +A+ +F +M + PD
Sbjct: 290 IDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPD 349
Query: 204 GVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKV 263
T+V + A +G L + +H +Y + + +L+DMY KCG + A V
Sbjct: 350 DTTLVIVLPAIAQLGRLSKAIDMH--LYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLV 407
Query: 264 FATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKV 323
F ++ +++ W ++I G A+HG A + + ++P+ +TFVGVL+AC H G V
Sbjct: 408 FEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLV 467
Query: 324 QEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMG 383
+EG F++M+ + I PRLQHYGCMVD+L R+G ++ A ++EEMP++PN ++W +
Sbjct: 468 KEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLT 527
Query: 384 ACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKV 443
AC + E GE VAKHL +N +YV+LSN+YA+ GMWK+V R+R+ MKE ++ K+
Sbjct: 528 ACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKI 587
Query: 444 PAYS 447
P S
Sbjct: 588 PGCS 591
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 172/392 (43%), Gaps = 72/392 (18%)
Query: 68 PFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHS 127
PF WN +I+ ++ + PR AL L LML GV D+++L +VLKA + ++ G Q+H
Sbjct: 86 PFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHG 145
Query: 128 LGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARD 187
K GL ++ + + I LY K G +R +FD P S+N++I G + GL
Sbjct: 146 FLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVS 205
Query: 188 AIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSL 247
A +F M + ++S S G+ + + ++ A E+ D++ WNS+
Sbjct: 206 ARELFDLM-----PMEMKNLISWNSMISGYAQTSDGVDIASKLF-ADMPEK-DLISWNSM 258
Query: 248 VDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVN------------------ 289
+D Y K GR++ A +F M R+V +W ++I GYA G V+
Sbjct: 259 IDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYN 318
Query: 290 -------------EALECFWCM-REAGVRPNYVTFVGVLSACVHGGKVQE---------- 325
EALE F M +E+ + P+ T V VL A G++ +
Sbjct: 319 SMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVE 378
Query: 326 ---------GRCYFDM----------MKNVYGITPR-LQHYGCMVDLLGRAGLLDEAMKM 365
G DM M GI + + H+ M+ L GL + A M
Sbjct: 379 KQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDM 438
Query: 366 ---VEEMPMKPNSIVWGCLMGACETYGNVEMG 394
+E + +KP+ I + ++ AC G V+ G
Sbjct: 439 LLQIERLSLKPDDITFVGVLNACSHSGLVKEG 470
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 127/378 (33%), Positives = 199/378 (52%), Gaps = 7/378 (1%)
Query: 71 WNNIIRCYTRLEAPRNA-LRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
WN +I CY R +A L + + G+ PD T +L A AI G+ +H
Sbjct: 301 WNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPAS----AILEGRTIHGYA 356
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
++ G + ET I++Y + G+ SA ++FD + + SWN++I Q G A+
Sbjct: 357 MRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSAL 416
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
+F + PD T+ S+ A L G ++H + ++ T IL NSLV
Sbjct: 417 ELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIIL--NSLVH 474
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
MY CG ++ A K F + ++V SW S+I+ YA+HG ++ F M + V PN T
Sbjct: 475 MYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKST 534
Query: 310 FVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
F +L+AC G V EG YF+ MK YGI P ++HYGCM+DL+GR G A + +EEM
Sbjct: 535 FASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEM 594
Query: 370 PMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVE 429
P P + +WG L+ A + ++ + E+ A+ + +E N G YV+L N+YA G W++V
Sbjct: 595 PFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVN 654
Query: 430 RIRSSMKEGRLAKVPAYS 447
RI+ M+ +++ + S
Sbjct: 655 RIKLLMESKGISRTSSRS 672
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 170/328 (51%), Gaps = 13/328 (3%)
Query: 61 FLESNPA-PFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAI 119
F E N A F WN +I+ +T A++ + M+ AGV D +T P V+K+V ++
Sbjct: 87 FDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSL 146
Query: 120 ELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGL 179
E GK++H++ +K+G ++ Y I+LY K G A VF+E P+ + SWN++I G
Sbjct: 147 EEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGY 206
Query: 180 SQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERT 239
G ++ +F M + GF PD + +S AC V ++G ++H ++ E
Sbjct: 207 LALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSR-IETG 265
Query: 240 DILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMR 299
D+++ S++DMY K G + A ++F M +RN+ +W +I YA +G V +A CF M
Sbjct: 266 DVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMS 325
Query: 300 EA-GVRPNYVTFVGVLSACVHGGKVQEGRCY--FDMMKNVYGITPRLQHYGCMVDLLGRA 356
E G++P+ +T + +L A + EGR + M + G P + ++D+ G
Sbjct: 326 EQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRR---GFLPHMVLETALIDMYGEC 378
Query: 357 GLLDEAMKMVEEMPMKPNSIVWGCLMGA 384
G L A + + M K N I W ++ A
Sbjct: 379 GQLKSAEVIFDRMAEK-NVISWNSIIAA 405
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 116/266 (43%), Gaps = 13/266 (4%)
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
K+ Q N+ T + + S A +FDE WN +I G + GL +A++
Sbjct: 57 KVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQ 116
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDM 250
+ M G D T + + + L+ G ++H V K +D+ + NSL+ +
Sbjct: 117 FYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMV--IKLGFVSDVYVCNSLISL 174
Query: 251 YGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTF 310
Y K G A KVF M ER++ SW S+I GY G +L F M + G +P+ +
Sbjct: 175 YMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFST 234
Query: 311 VGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMV-----DLLGRAGLLDEAMKM 365
+ L AC H + G+ + + + R++ MV D+ + G + A ++
Sbjct: 235 MSALGACSHVYSPKMGK-----EIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERI 289
Query: 366 VEEMPMKPNSIVWGCLMGACETYGNV 391
M ++ N + W ++G G V
Sbjct: 290 FNGM-IQRNIVAWNVMIGCYARNGRV 314
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 88/198 (44%), Gaps = 1/198 (0%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WN+II Y + +AL L + + ++PD T+ +L A +S ++ G+++H+
Sbjct: 398 SWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYI 457
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
VK +N +++Y G+ AR F+ + SWN++I + G R ++
Sbjct: 458 VKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISV 517
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
+F M P+ T SL +AC G + G + + + I + ++D
Sbjct: 518 WLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGID-PGIEHYGCMLD 576
Query: 250 MYGKCGRMDLAYKVFATM 267
+ G+ G A + M
Sbjct: 577 LIGRTGNFSAAKRFLEEM 594
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 199/356 (55%), Gaps = 5/356 (1%)
Query: 94 MLRAGVLPDRYTLPIVLKAVCQ-SFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSG 152
M R + P+R TL VL A + ++ L K++H + G +E F+ +YC+ G
Sbjct: 242 MQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCG 301
Query: 153 EFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTS 212
+ +R++F+ + + W+++I G ++ G + + + MR+ G + VT++++ S
Sbjct: 302 NVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVS 361
Query: 213 ACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNV 272
AC + L +H+ + K + IL+ N+L+DMY KCG + A +VF + E+++
Sbjct: 362 ACTNSTLLSFASTVHSQIL--KCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDL 419
Query: 273 SSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDM 332
SW+S+I Y +HGH +EALE F M + G + + F+ +LSAC H G V+E + F
Sbjct: 420 VSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQ 479
Query: 333 MKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVE 392
Y + L+HY C ++LLGR G +D+A ++ MPMKP++ +W L+ ACET+G ++
Sbjct: 480 AGK-YHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLD 538
Query: 393 M-GEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
+ G+ +A L EP N YV+LS I+ G + E +R M+ +L K +S
Sbjct: 539 VAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFS 594
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 125/267 (46%), Gaps = 11/267 (4%)
Query: 87 ALRLHVLMLRA-GVLPDRYTLPIVLKAVC-QSFAIELGKQVHSLGVKIGLQTNEYCETGF 144
ALRL+ L + + G LP V+KA Q LG Q+H L +K G +
Sbjct: 29 ALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSL 88
Query: 145 INLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDG 204
I++Y K + R VFDE S+ ++I Q GL +A+++ M +GF P
Sbjct: 89 ISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKS 148
Query: 205 VTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVF 264
+ SL + C +G ++ + + +L+ +LVDMY K A+ VF
Sbjct: 149 ELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVF 208
Query: 265 ATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQ 324
M+ +N SWT++I G + + ++ F M+ +RPN VT + VL ACV ++
Sbjct: 209 DQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACV---ELN 265
Query: 325 EGRCYFDMMKNVYGITPRLQHYGCMVD 351
G ++K ++G + R +GC D
Sbjct: 266 YGS---SLVKEIHGFSFR---HGCHAD 286
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 101/224 (45%), Gaps = 7/224 (3%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
W+++I Y + L M + G+ + TL ++ A S + VHS +
Sbjct: 321 WSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQIL 380
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
K G ++ I++Y K G ++AR VF E + L SW+++I G +A+
Sbjct: 381 KCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALE 440
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCV--YHAKAAERTDILMWNSLV 248
+F M + G D + +++ SAC G ++ + T YH + + +
Sbjct: 441 IFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVT----LEHYACYI 496
Query: 249 DMYGKCGRMDLAYKVFATMDER-NVSSWTSLIVGYAMHGHVNEA 291
++ G+ G++D A++V M + + W+SL+ HG ++ A
Sbjct: 497 NLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVA 540
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 16/235 (6%)
Query: 176 IGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMV--SLTSACGSVGD-LQLGLQLH-TCVY 231
+ GL +A+R++ ++ H +G T + S+ AC + LG QLH C+
Sbjct: 17 LKGLVSDQFYDEALRLY-KLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCL- 74
Query: 232 HAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEA 291
KA D ++ NSL+ MY K R KVF M R+ S+ S+I G + EA
Sbjct: 75 --KAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEA 132
Query: 292 LECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHY----G 347
++ M G P +L+ C G + M + + R+Q
Sbjct: 133 MKLIKEMYFYGFIPKSELVASLLALCTRMGSSSK---VARMFHALVLVDERMQESVLLST 189
Query: 348 CMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQ 402
+VD+ + A + ++M +K N + W ++ C N EMG + + +Q
Sbjct: 190 ALVDMYLKFDDHAAAFHVFDQMEVK-NEVSWTAMISGCVANQNYEMGVDLFRAMQ 243
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 178/308 (57%), Gaps = 5/308 (1%)
Query: 142 TGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMR-RHGF 200
T I+ YC + +AR +FD P+ L SWN +IGG Q ++ IR+F M+
Sbjct: 211 TTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSL 270
Query: 201 APDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLA 260
PD VT++S+ A G L LG H V K ++ + +++DMY KCG ++ A
Sbjct: 271 DPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVC--TAILDMYSKCGEIEKA 328
Query: 261 YKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHG 320
++F M E+ V+SW ++I GYA++G+ AL+ F M +P+ +T + V++AC HG
Sbjct: 329 KRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMM-IEEKPDEITMLAVITACNHG 387
Query: 321 GKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGC 380
G V+EGR +F +M+ + G+ +++HYGCMVDLLGRAG L EA ++ MP +PN I+
Sbjct: 388 GLVEEGRKWFHVMREM-GLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSS 446
Query: 381 LMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRL 440
+ AC Y ++E E + K LEP NDG YV+L N+YA W + +++ M++ +
Sbjct: 447 FLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQA 506
Query: 441 AKVPAYSL 448
K SL
Sbjct: 507 KKEVGCSL 514
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 137/309 (44%), Gaps = 18/309 (5%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVL-PDRYTLPIVLKAVCQSFAIELGKQVHS 127
F N++I+ Y ++ L+ + + PD +T + K+ S + G Q+HS
Sbjct: 43 FLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHS 102
Query: 128 LGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARD 187
+ G + Y TG +++Y K G+ AR FDE P SW A+I G + G
Sbjct: 103 QIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDL 162
Query: 188 AIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSL 247
A ++F M D V ++ GD+ +L + H ++ W ++
Sbjct: 163 ASKLFDQMPH---VKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKT------VITWTTM 213
Query: 248 VDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMR-EAGVRPN 306
+ Y +D A K+F M ERN+ SW ++I GY + E + F M+ + P+
Sbjct: 214 IHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPD 273
Query: 307 YVTFVGVLSACVHGGKVQEGR---CYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAM 363
VT + VL A G + G C+ K + +++ ++D+ + G +++A
Sbjct: 274 DVTILSVLPAISDTGALSLGEWCHCFVQRKK----LDKKVKVCTAILDMYSKCGEIEKAK 329
Query: 364 KMVEEMPMK 372
++ +EMP K
Sbjct: 330 RIFDEMPEK 338
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 8/201 (3%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVL-PDRYTLPIVLKAVCQSFAIELGKQVHSL 128
+WN +I Y + + P+ +RL M L PD T+ VL A+ + A+ LG+ H
Sbjct: 240 SWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCF 299
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
+ L T +++Y K GE A+ +FDE P+ ++ SWNA+I G + G AR A
Sbjct: 300 VQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAA 359
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHA--KAAERTDILMWNS 246
+ +FV M PD +TM+++ +AC G ++ G + +H + I +
Sbjct: 360 LDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKW----FHVMREMGLNAKIEHYGC 414
Query: 247 LVDMYGKCGRMDLAYKVFATM 267
+VD+ G+ G + A + M
Sbjct: 415 MVDLLGRAGSLKEAEDLITNM 435
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/377 (32%), Positives = 200/377 (53%), Gaps = 2/377 (0%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
+++ +II + A L +M + +T ++L+A +I +GKQ+H
Sbjct: 190 YSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVC 249
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
+K+G+ N + G I++Y K G+ AR F+ P+ +WN VI G + G + +A
Sbjct: 250 ALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEA 309
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
+ + +MR G + D T+ + + L+L Q H + + ++I+ +LV
Sbjct: 310 LCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASL--IRNGFESEIVANTALV 367
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYV 308
D Y K GR+D A VF + +N+ SW +L+ GYA HG +A++ F M A V PN+V
Sbjct: 368 DFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHV 427
Query: 309 TFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEE 368
TF+ VLSAC + G ++G F M V+GI PR HY CM++LLGR GLLDEA+ +
Sbjct: 428 TFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRR 487
Query: 369 MPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEV 428
P+K +W L+ AC N+E+G VA+ L + P G YVV+ N+Y + G E
Sbjct: 488 APLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEA 547
Query: 429 ERIRSSMKEGRLAKVPA 445
+ +++ L+ +PA
Sbjct: 548 AGVLETLESKGLSMMPA 564
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 192/377 (50%), Gaps = 3/377 (0%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
W ++ + + A+ + M G DR + +L+A ++G+ VH
Sbjct: 185 WTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLY 244
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
+ GL N ET +++Y K G A VF SW ++I G +Q GLA A
Sbjct: 245 RTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFE 304
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDM 250
V M+ GF PD VT+V + AC VG L+ G +H + +R + +L+DM
Sbjct: 305 AVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDR---VTATALMDM 361
Query: 251 YGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTF 310
Y KCG + + ++F + +++ W ++I Y +HG+ E + F M E+ + P++ TF
Sbjct: 362 YSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATF 421
Query: 311 VGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMP 370
+LSA H G V++G+ +F +M N Y I P +HY C++DLL RAG ++EA+ M+
Sbjct: 422 ASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEK 481
Query: 371 MKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVER 430
+ +W L+ C + N+ +G+ A + L P + G ++SN +A WKEV +
Sbjct: 482 LDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAK 541
Query: 431 IRSSMKEGRLAKVPAYS 447
+R M+ G + KVP YS
Sbjct: 542 VRKLMRNGAMEKVPGYS 558
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 162/323 (50%), Gaps = 11/323 (3%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
+N++I Y+R + P LRL+ M+ + PD T + +KA +E G+ V V
Sbjct: 84 YNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAV 143
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
G + + + + +NLY K G+ A ++F + + W ++ G +Q G + A+
Sbjct: 144 DFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVE 203
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDM 250
+ M+ GF D V M+ L A G +GD ++G +H +Y + ++++ SLVDM
Sbjct: 204 FYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLY--RTGLPMNVVVETSLVDM 261
Query: 251 YGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTF 310
Y K G +++A +VF+ M + SW SLI G+A +G N+A E M+ G +P+ VT
Sbjct: 262 YAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTL 321
Query: 311 VGVLSACVHGGKVQEGR---CYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVE 367
VGVL AC G ++ GR CY + +T ++D+ + G L + ++ E
Sbjct: 322 VGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTAT-----ALMDMYSKCGALSSSREIFE 376
Query: 368 EMPMKPNSIVWGCLMGACETYGN 390
+ K + + W ++ +GN
Sbjct: 377 HVGRK-DLVCWNTMISCYGIHGN 398
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 125/270 (46%), Gaps = 11/270 (4%)
Query: 124 QVHSLGVKIG-LQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQG 182
Q+H+ + G L I + GE + AR VFDE P + +N++I S+G
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRG 94
Query: 183 GLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAE---RT 239
+ +R++ M PD T AC S L L+ V+ KA + +
Sbjct: 95 KNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLS----GLVLEKGEAVW-CKAVDFGYKN 149
Query: 240 DILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMR 299
D+ + +S++++Y KCG+MD A +F M +R+V WT+++ G+A G +A+E + M+
Sbjct: 150 DVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQ 209
Query: 300 EAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLL 359
G + V +G+L A G + GR + G+ + +VD+ + G +
Sbjct: 210 NEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRT-GLPMNVVVETSLVDMYAKVGFI 268
Query: 360 DEAMKMVEEMPMKPNSIVWGCLMGACETYG 389
+ A ++ M K ++ WG L+ G
Sbjct: 269 EVASRVFSRMMFK-TAVSWGSLISGFAQNG 297
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 9/220 (4%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+W ++I + + A V M G PD TL VL A Q +++ G+ VH
Sbjct: 285 SWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYI 344
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
+K + + T +++Y K G +S+R +F+ L WN +I G ++ +
Sbjct: 345 LKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVV 403
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCV---YHAKAAERTDILMWNS 246
+F+ M PD T SL SA G ++ G + + Y + +E+ +
Sbjct: 404 SLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKH----YVC 459
Query: 247 LVDMYGKCGRMDLAYKVFATMDERN-VSSWTSLIVGYAMH 285
L+D+ + GR++ A + + N + W +L+ G H
Sbjct: 460 LIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINH 499
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 87/190 (45%), Gaps = 15/190 (7%)
Query: 224 LQLHTCVYHAKAAERTDILMWNSLV-DMYGKCGRM---DLAYKVFATMDERNVSSWTSLI 279
L+ H HA ++L +S+ D+ CGR+ A KVF + +R VS + S+I
Sbjct: 29 LKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMI 88
Query: 280 VGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGI 339
V Y+ + +E L + M ++P+ TF + AC+ G +++G + + +G
Sbjct: 89 VVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVD-FGY 147
Query: 340 TPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAK 399
+ +++L + G +DEA + +M K + I W ++ G K
Sbjct: 148 KNDVFVCSSVLNLYMKCGKMDEAEVLFGKMA-KRDVICWTTMVTGFAQAG---------K 197
Query: 400 HLQALEPWND 409
L+A+E + +
Sbjct: 198 SLKAVEFYRE 207
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 120/378 (31%), Positives = 196/378 (51%), Gaps = 3/378 (0%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN +I + E L L M G PD YTL V ++ +G+Q+H +
Sbjct: 59 WNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTI 118
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
K GL+ + + ++Y ++G+ +V P L +WN +I G +Q G +
Sbjct: 119 KYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLY 178
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDM 250
++ M+ G P+ +T V++ S+C + G Q+H K + + + +SL+ M
Sbjct: 179 LYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEA--IKIGASSVVAVVSSLISM 236
Query: 251 YGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMRE-AGVRPNYVT 309
Y KCG + A K F+ ++ + W+S+I Y HG +EA+E F M E + N V
Sbjct: 237 YSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVA 296
Query: 310 FVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
F+ +L AC H G +G FDMM YG P L+HY C+VDLLGRAG LD+A ++ M
Sbjct: 297 FLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSM 356
Query: 370 PMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVE 429
P+K + ++W L+ AC + N EM + V K + ++P + YV+L+N++A+ W++V
Sbjct: 357 PIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVS 416
Query: 430 RIRSSMKEGRLAKVPAYS 447
+R SM++ + K S
Sbjct: 417 EVRKSMRDKNVKKEAGIS 434
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 127/248 (51%), Gaps = 6/248 (2%)
Query: 144 FINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPD 203
IN Y ++G+ +AR VFDE PD KL +WNA+I GL Q + + +F M GF+PD
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 90
Query: 204 GVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKV 263
T+ S+ S + + +G Q+H Y K D+++ +SL MY + G++ V
Sbjct: 91 EYTLGSVFSGSAGLRSVSIGQQIHG--YTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIV 148
Query: 264 FATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVH-GGK 322
+M RN+ +W +LI+G A +G L + M+ +G RPN +TFV VLS+C +
Sbjct: 149 IRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIR 208
Query: 323 VQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLM 382
Q + + + +K G + + ++ + + G L +A K E + ++W ++
Sbjct: 209 GQGQQIHAEAIK--IGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE-DEDEVMWSSMI 265
Query: 383 GACETYGN 390
A +G
Sbjct: 266 SAYGFHGQ 273
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 221 bits (563), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 122/366 (33%), Positives = 184/366 (50%), Gaps = 2/366 (0%)
Query: 82 EAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCE 141
EA A +L + M R G+ P T +VLKA + +E G+Q+H+L K Q++E+
Sbjct: 337 EASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIG 396
Query: 142 TGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFA 201
+ I LY G F + SW ++I Q A +F +
Sbjct: 397 SALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIR 456
Query: 202 PDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAY 261
P+ T+ + SAC L G Q+ Y K+ + S + MY K G M LA
Sbjct: 457 PEEYTVSLMMSACADFAALSSGEQIQG--YAIKSGIDAFTSVKTSSISMYAKSGNMPLAN 514
Query: 262 KVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGG 321
+VF + +V++++++I A HG NEAL F M+ G++PN F+GVL AC HGG
Sbjct: 515 QVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGG 574
Query: 322 KVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCL 381
V +G YF MKN Y I P +H+ C+VDLLGR G L +A ++ + + + W L
Sbjct: 575 LVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRAL 634
Query: 382 MGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLA 441
+ +C Y + +G+ VA+ L LEP G+YV+L NIY + G+ E +R M++ +
Sbjct: 635 LSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVK 694
Query: 442 KVPAYS 447
K PA S
Sbjct: 695 KEPALS 700
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 133/290 (45%), Gaps = 16/290 (5%)
Query: 102 DRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVF 161
D I+ + +S ++ LGK H +K L Y +N+YCK E AR +F
Sbjct: 46 DSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLF 105
Query: 162 DENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQ 221
D P+ + S+N++I G +Q G A+ +F+ R D T CG DL
Sbjct: 106 DRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLD 165
Query: 222 LGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVG 281
LG LH V +++ + + N L+DMY KCG++D A +F DER+ SW SLI G
Sbjct: 166 LGELLHGLVVVNGLSQQ--VFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISG 223
Query: 282 YAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSAC---VHGGKVQEG---RCYFDMMKN 335
Y G E L M G+ VL AC ++ G +++G CY +
Sbjct: 224 YVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGM 283
Query: 336 VYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKP----NSIVWGCL 381
+ I R ++D+ + G L EA+K+ MP K N+++ G L
Sbjct: 284 EFDIVVRT----ALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFL 329
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 129/266 (48%), Gaps = 10/266 (3%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
++N++I YT++ A+ L + A + D++T L + ++LG+ +H L
Sbjct: 115 SFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLV 174
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
V GL + I++Y K G+ A +FD + SWN++I G + G A + +
Sbjct: 175 VVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPL 234
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACG---SVGDLQLGLQLHTCVYHAKAAERTDILMWNS 246
+ M R G + S+ AC + G ++ G+ +H Y AK DI++ +
Sbjct: 235 NLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIH--CYTAKLGMEFDIVVRTA 292
Query: 247 LVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHV-----NEALECFWCMREA 301
L+DMY K G + A K+F+ M +NV ++ ++I G+ + +EA + F M+
Sbjct: 293 LLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRR 352
Query: 302 GVRPNYVTFVGVLSACVHGGKVQEGR 327
G+ P+ TF VL AC ++ GR
Sbjct: 353 GLEPSPSTFSVVLKACSAAKTLEYGR 378
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 108/214 (50%), Gaps = 8/214 (3%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+W ++I C+ + E +A L + + + P+ YT+ +++ A A+ G+Q+
Sbjct: 426 SWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYA 485
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
+K G+ +T I++Y KSG A VF E +P + +++A+I L+Q G A +A+
Sbjct: 486 IKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEAL 545
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCV---YHAKAAERTDILMWNS 246
+F +M+ HG P+ + + AC G + GL+ C+ Y E+ +
Sbjct: 546 NIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKH----FTC 601
Query: 247 LVDMYGKCGRM-DLAYKVFATMDERNVSSWTSLI 279
LVD+ G+ GR+ D + ++ + + +W +L+
Sbjct: 602 LVDLLGRTGRLSDAENLILSSGFQDHPVTWRALL 635
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 221 bits (563), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 203/388 (52%), Gaps = 4/388 (1%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQ 124
P+ WN ++ Y+ E A+ M + PD+ TL ++L + + +E GKQ
Sbjct: 378 QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQ 437
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDP-KLGSWNAVIGGLSQGG 183
+H + ++ + N + +G I +Y + + + +FD+ + + WN++I G
Sbjct: 438 IHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNM 497
Query: 184 LARDAIRVFVNMRRHG-FAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDIL 242
L A+ +F M + P+ + ++ S+C + L G Q H V K+ +D
Sbjct: 498 LDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLV--VKSGYVSDSF 555
Query: 243 MWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAG 302
+ +L DMY KCG +D A + F + +N W +I GY +G +EA+ + M +G
Sbjct: 556 VETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSG 615
Query: 303 VRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEA 362
+P+ +TFV VL+AC H G V+ G M+ ++GI P L HY C+VD LGRAG L++A
Sbjct: 616 EKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDA 675
Query: 363 MKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANK 422
K+ E P K +S++W L+ +C +G+V + VA+ L L+P + AYV+LSN Y++
Sbjct: 676 EKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSL 735
Query: 423 GMWKEVERIRSSMKEGRLAKVPAYSLTT 450
W + ++ M + R+ K P S TT
Sbjct: 736 RQWDDSAALQGLMNKNRVHKTPGQSWTT 763
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 160/341 (46%), Gaps = 20/341 (5%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WNN+I R AL ++ M+ G LP R+TL VL A + G + H +
Sbjct: 105 SWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVA 164
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARM-VFDENPDPKLGSWNAVIGGLSQGGLARDA 188
VK GL N + +++Y K G + VF+ P S+ AVIGGL++ +A
Sbjct: 165 VKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEA 224
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTS------ACGSVGDL---QLGLQLHTCVYHAKAAERT 239
+++F M G D V + ++ S C S+ ++ +LG Q+H +
Sbjct: 225 VQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLAL--RLGFGG 282
Query: 240 DILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMR 299
D+ + NSL+++Y K M+ A +FA M E NV SW +IVG+ ++++E MR
Sbjct: 283 DLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMR 342
Query: 300 EAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLL 359
++G +PN VT + VL AC G V+ GR F + P + + M+
Sbjct: 343 DSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ-----PSVSAWNAMLSGYSNYEHY 397
Query: 360 DEAMKMVEEMP---MKPNSIVWGCLMGACETYGNVEMGEYV 397
+EA+ +M +KP+ ++ +C +E G+ +
Sbjct: 398 EEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQI 438
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 115/245 (46%), Gaps = 9/245 (3%)
Query: 73 NIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKI 132
+++RCY + +H ++R G+ D Y +L IE G ++ V
Sbjct: 11 SLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLL-----DLYIECGDGDYARKVFD 65
Query: 133 GLQTNE-YCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRV 191
+ + Y F+ CK G+ A VFD P+ + SWN +I L + G A+ V
Sbjct: 66 EMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVV 125
Query: 192 FVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMY 251
+ M GF P T+ S+ SAC V D G++ H K +I + N+L+ MY
Sbjct: 126 YKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVA--VKTGLDKNIFVGNALLSMY 183
Query: 252 GKCGRM-DLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTF 310
KCG + D +VF ++ + N S+T++I G A V EA++ F M E GV+ + V
Sbjct: 184 AKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCL 243
Query: 311 VGVLS 315
+LS
Sbjct: 244 SNILS 248
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 120/277 (43%), Gaps = 51/277 (18%)
Query: 64 SNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLK---------AVC 114
S P ++ +I R A+++ LM GV D L +L ++
Sbjct: 201 SQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLS 260
Query: 115 QSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNA 174
+ + ELGKQ+H L +++G + + + +Y K+ + A ++F E P+ + SWN
Sbjct: 261 EIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNI 320
Query: 175 VIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAK 234
+I G Q + ++ MR GF P+ VT +S+ AC GD++ G
Sbjct: 321 MIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETG----------- 369
Query: 235 AAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALEC 294
++F+++ + +VS+W +++ GY+ + H EA+
Sbjct: 370 --------------------------RRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISN 403
Query: 295 FWCMREAGVRPNYVTFVGVLSAC-----VHGGKVQEG 326
F M+ ++P+ T +LS+C + GGK G
Sbjct: 404 FRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHG 440
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 149/344 (43%), Gaps = 55/344 (15%)
Query: 133 GLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVF 192
G Q NE + +SG+ + R +F P P + +WNA++ G S +AI F
Sbjct: 345 GFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNF 404
Query: 193 VNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYG 252
M+ PD T+ + S+C + L+ G Q+H V + ++ + I+ + L+ +Y
Sbjct: 405 RQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIV--SGLIAVYS 462
Query: 253 KCGRMDLAYKVFAT-MDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVR-PNYVTF 310
+C +M+++ +F ++E +++ W S+I G+ + +AL F M + V PN +F
Sbjct: 463 ECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSF 522
Query: 311 VGVLSAC------VHG-----------------------------GKVQEGRCYFD--MM 333
VLS+C +HG G++ R +FD +
Sbjct: 523 ATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLR 582
Query: 334 KNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM---PMKPNSIVWGCLMGACETYGN 390
KN + Y G G DEA+ + +M KP+ I + ++ AC G
Sbjct: 583 KNTVIWNEMIHGY-------GHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGL 635
Query: 391 VEMGEYVAKHLQ---ALEPWNDGAYVVLSNIYANKGMWKEVERI 431
VE G + +Q +EP D Y+ + + G ++ E++
Sbjct: 636 VETGLEILSSMQRIHGIEPELD-HYICIVDCLGRAGRLEDAEKL 678
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/372 (33%), Positives = 204/372 (54%), Gaps = 5/372 (1%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+W +I Y P A+ + +M + V PD T+ VL A ++ G ++H L
Sbjct: 365 SWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLA 424
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
+K L + IN+Y K A +F P + SW ++I GL +A+
Sbjct: 425 IKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL 484
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
+F+ + P+ +T+ + +AC +G L G ++H V D + N+L+D
Sbjct: 485 -IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVG--LDDFLPNALLD 541
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
MY +CGRM+ A+ F + +++V+SW L+ GY+ G + +E F M ++ VRP+ +T
Sbjct: 542 MYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEIT 600
Query: 310 FVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
F+ +L C V++G YF M++ YG+TP L+HY C+VDLLGRAG L EA K +++M
Sbjct: 601 FISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKM 659
Query: 370 PMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVE 429
P+ P+ VWG L+ AC + +++GE A+H+ L+ + G Y++L N+YA+ G W+EV
Sbjct: 660 PVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVA 719
Query: 430 RIRSSMKEGRLA 441
++R MKE L
Sbjct: 720 KVRRMMKENGLT 731
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 162/321 (50%), Gaps = 13/321 (4%)
Query: 69 FNWNNIIRCYTRLEAPRNALRL-HVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHS 127
F+WN ++ Y + A+ L H ++ GV PD YT P VL+ + GK+VH
Sbjct: 161 FSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHV 220
Query: 128 LGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARD 187
V+ G + + I +Y K G+ SAR++FD P + SWNA+I G + G+ +
Sbjct: 221 HVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHE 280
Query: 188 AIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSL 247
+ +F MR PD +T+ S+ SAC +GD +LG +H V A DI + NSL
Sbjct: 281 GLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFA--VDISVCNSL 338
Query: 248 VDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNY 307
MY G A K+F+ M+ +++ SWT++I GY + ++A++ + M + V+P+
Sbjct: 339 TQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDE 398
Query: 308 VTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHY----GCMVDLLGRAGLLDEAM 363
+T VLSAC G + G ++ K I RL Y ++++ + +D+A+
Sbjct: 399 ITVAAVLSACATLGDLDTG---VELHK--LAIKARLISYVIVANNLINMYSKCKCIDKAL 453
Query: 364 KMVEEMPMKPNSIVWGCLMGA 384
+ +P K N I W ++
Sbjct: 454 DIFHNIPRK-NVISWTSIIAG 473
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 161/366 (43%), Gaps = 51/366 (13%)
Query: 95 LRAGVLPDRYTLPIVLKAVCQ-SFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGE 153
LR V D + + L +C+ A E G +V+S+ + F+ ++ + G
Sbjct: 88 LRVAVDEDVF---VALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGN 144
Query: 154 FTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMR-RHGFAPDGVTMVSLTS 212
A VF + + L SWN ++GG ++ G +A+ ++ M G PD T +
Sbjct: 145 LVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLR 204
Query: 213 ACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNV 272
CG + DL G ++H V+ + DI + N+L+ MY KCG + A +F M R++
Sbjct: 205 TCGGIPDLARGKEVH--VHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDI 262
Query: 273 SSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSAC--------------- 317
SW ++I GY +G +E LE F+ MR V P+ +T V+SAC
Sbjct: 263 ISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAY 322
Query: 318 --------------------VHGGKVQEGRCYFDMM--KNVYGITPRLQHYGCMVDLLGR 355
++ G +E F M K++ T + Y + L
Sbjct: 323 VITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYE--YNFLPD 380
Query: 356 AGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVL 415
+ + +M+++ +KP+ I ++ AC T G+++ G V H A++ +YV++
Sbjct: 381 KAI--DTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG--VELHKLAIKA-RLISYVIV 435
Query: 416 SNIYAN 421
+N N
Sbjct: 436 ANNLIN 441
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 125/302 (41%), Gaps = 53/302 (17%)
Query: 178 GLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAE 237
GL G +A+++ +M+ A D V+L C + G ++++ + ++
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSS- 126
Query: 238 RTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFW- 296
+ + N+ + M+ + G + A+ VF M ERN+ SW L+ GYA G+ +EA+ C +
Sbjct: 127 -LGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAM-CLYH 184
Query: 297 -CMREAGVRPNYVTFVGVLSAC-----------------------------------VHG 320
+ GV+P+ TF VL C V
Sbjct: 185 RMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKC 244
Query: 321 GKVQEGRCYFDMMKNVYGITPR--LQHYGCMVDLLGRAGLLDEAMKMVEEM---PMKPNS 375
G V+ R FD M PR + + M+ G+ E +++ M + P+
Sbjct: 245 GDVKSARLLFDRM-------PRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDL 297
Query: 376 IVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYV-VLSNIYANKGMWKEVERIRSS 434
+ ++ ACE G+ +G + ++ D + L+ +Y N G W+E E++ S
Sbjct: 298 MTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSR 357
Query: 435 MK 436
M+
Sbjct: 358 ME 359
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 139/418 (33%), Positives = 203/418 (48%), Gaps = 34/418 (8%)
Query: 63 ESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELG 122
+SN WN++I Y AL L M R D TL V+ A +E G
Sbjct: 279 KSNRCVILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIGLGFLETG 337
Query: 123 KQVHSLGVKIGLQTN------------------EYCE-------------TGFINLYCKS 151
KQ+H K GL + E C+ I +Y
Sbjct: 338 KQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSC 397
Query: 152 GEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLT 211
G A+ VF+ + L SWN++ G SQ G + + F M + D V++ S+
Sbjct: 398 GRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVI 457
Query: 212 SACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERN 271
SAC S+ L+LG Q+ +D ++ +SL+D+Y KCG ++ +VF TM + +
Sbjct: 458 SACASISSLELGEQVFA--RATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSD 515
Query: 272 VSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFD 331
W S+I GYA +G EA++ F M AG+RP +TF+ VL+AC + G V+EGR F+
Sbjct: 516 EVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFE 575
Query: 332 MMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNV 391
MK +G P +H+ CMVDLL RAG ++EA+ +VEEMP + +W ++ C G
Sbjct: 576 SMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYK 635
Query: 392 EMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYSLT 449
MG+ A+ + LEP N AYV LS I+A G W+ +R M+E + K P S T
Sbjct: 636 AMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWT 693
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 148/349 (42%), Gaps = 63/349 (18%)
Query: 101 PDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEF------ 154
D TL VLKA + A++ GKQ+H+ + G++ + + +N+Y K G+
Sbjct: 185 ADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYM 244
Query: 155 -------------------------TSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
+R +FD + + WN++I G + +A+
Sbjct: 245 LEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEAL 304
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLH--TCVY---------------H 232
+F MR D T+ ++ +AC +G L+ G Q+H C + +
Sbjct: 305 VLFNEMRNET-REDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMY 363
Query: 233 AK------------AAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIV 280
+K E D ++ NS++ +Y CGR+D A +VF ++ +++ SW S+
Sbjct: 364 SKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTN 423
Query: 281 GYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGIT 340
G++ +G E LE F M + + + V+ V+SAC ++ G F + G+
Sbjct: 424 GFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVF-ARATIVGLD 482
Query: 341 PRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYG 389
++DL + G ++ ++ + M +K + + W ++ T G
Sbjct: 483 SDQVVSSSLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISGYATNG 530
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 112/249 (44%), Gaps = 13/249 (5%)
Query: 42 NCTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLP 101
+C I +V+ I N + +WN++ +++ L M + +
Sbjct: 396 SCGRIDDAKRVFERI-------ENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPT 448
Query: 102 DRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVF 161
D +L V+ A ++ELG+QV + +GL +++ + I+LYCK G R VF
Sbjct: 449 DEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVF 508
Query: 162 DENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQ 221
D WN++I G + G +AI +F M G P +T + + +AC G ++
Sbjct: 509 DTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVE 568
Query: 222 LGLQLHTC--VYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMD-ERNVSSWTSL 278
G +L V H ++ ++ +VD+ + G ++ A + M + + S W+S+
Sbjct: 569 EGRKLFESMKVDHGFVPDKEH---FSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSI 625
Query: 279 IVGYAMHGH 287
+ G +G+
Sbjct: 626 LRGCVANGY 634
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 135/300 (45%), Gaps = 53/300 (17%)
Query: 148 YCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTM 207
+ K+GE + AR +F+ P+ + + N+++ G G A +A+R+F + F+ D +T+
Sbjct: 134 FAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLF---KELNFSADAITL 190
Query: 208 VSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATM 267
++ AC + L+ G Q+H + D M +SLV++Y KCG + +A + +
Sbjct: 191 TTVLKACAELEALKCGKQIHAQILIGGV--ECDSKMNSSLVNVYAKCGDLRMASYMLEQI 248
Query: 268 DERNVSSWTSLIVGYAMHGHVN-------------------------------EALECFW 296
E + S ++LI GYA G VN EAL F
Sbjct: 249 REPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFN 308
Query: 297 CMREAGVRPNYVTFVGVLSACVHGGKVQEGR------CYFDMMKNVYGITPRLQHYGCMV 350
MR R + T V++AC+ G ++ G+ C F ++ ++ + ++
Sbjct: 309 EMRNE-TREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVAST-------LL 360
Query: 351 DLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQ--ALEPWN 408
D+ + G EA K+ E+ ++I+ ++ + G ++ + V + ++ +L WN
Sbjct: 361 DMYSKCGSPMEACKLFSEVE-SYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWN 419
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 15/166 (9%)
Query: 241 ILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMRE 300
+++ N L+ MY + G+M +A +F M +RN SW ++I GY G +L F M E
Sbjct: 62 VIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPE 121
Query: 301 AGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMM--KNVYGITPRLQHYGCMVDLLGRAGL 358
R Y V V+S G++ R F+ M K+V + L Y +L G
Sbjct: 122 ---RDGYSWNV-VVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGY-----ILN--GY 170
Query: 359 LDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQAL 404
+EA+++ +E+ ++I ++ AC ++ G+ + H Q L
Sbjct: 171 AEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQI--HAQIL 214
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 126/410 (30%), Positives = 205/410 (50%), Gaps = 34/410 (8%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WN ++ Y + AL + R+G+ + ++ +L A +S ++L +Q H
Sbjct: 146 SWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQV 205
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDEN------------------------- 164
+ G +N I+ Y K G+ SA+ FDE
Sbjct: 206 LVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAE 265
Query: 165 ------PDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVG 218
P+ SW A+I G + G A+ +F M G P+ T S A S+
Sbjct: 266 KLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIA 325
Query: 219 DLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDER-NVSSWTS 277
L+ G ++H Y + R + ++ +SL+DMY K G ++ + +VF D++ + W +
Sbjct: 326 SLRHGKEIHG--YMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNT 383
Query: 278 LIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVY 337
+I A HG ++AL M + V+PN T V +L+AC H G V+EG +F+ M +
Sbjct: 384 MISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQH 443
Query: 338 GITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYV 397
GI P +HY C++DLLGRAG E M+ +EEMP +P+ +W ++G C +GN E+G+
Sbjct: 444 GIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKA 503
Query: 398 AKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
A L L+P + Y++LS+IYA+ G W+ VE++R MK+ R+ K A S
Sbjct: 504 ADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVS 553
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 143/333 (42%), Gaps = 39/333 (11%)
Query: 137 NEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMR 196
N Y ++ Y KSG AR+VFD P+ + SWN ++ G +Q G +A+ + R
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 197 RHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHA----------------------K 234
R G + + L +AC LQL Q H V A +
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQME 231
Query: 235 AAER-------TDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGH 287
+A+R DI +W +L+ Y K G M+ A K+F M E+N SWT+LI GY G
Sbjct: 232 SAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGS 291
Query: 288 VNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYG 347
N AL+ F M GV+P TF L A ++ G+ M + P
Sbjct: 292 GNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT-NVRPNAIVIS 350
Query: 348 CMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQAL--- 404
++D+ ++G L+ + ++ K + + W ++ A +G +G + L +
Sbjct: 351 SLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHG---LGHKALRMLDDMIKF 407
Query: 405 --EPWNDGAYVVLSNIYANKGMWKEVERIRSSM 435
+P N VV+ N ++ G+ +E R SM
Sbjct: 408 RVQP-NRTTLVVILNACSHSGLVEEGLRWFESM 439
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 108/231 (46%), Gaps = 13/231 (5%)
Query: 68 PFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHS 127
P +W +I Y R + AL L M+ GV P+++T L A ++ GK++H
Sbjct: 276 PVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHG 335
Query: 128 LGVKIGLQTNEYCETGFINLYCKSGEFTSARMVF---DENPDPKLGSWNAVIGGLSQGGL 184
++ ++ N + I++Y KSG ++ VF D+ D WN +I L+Q GL
Sbjct: 336 YMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVF--WNTMISALAQHGL 393
Query: 185 ARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTC--VYHAKAAERTDIL 242
A+R+ +M + P+ T+V + +AC G ++ GL+ V H ++
Sbjct: 394 GHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEH-- 451
Query: 243 MWNSLVDMYGKCG-RMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEAL 292
+ L+D+ G+ G +L K+ E + W +++ +HG NE L
Sbjct: 452 -YACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHG--NEEL 499
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 207 MVSLTSACGSVGDLQLGLQLHTCVYHAKAA--ERTDILMWNSLVDMYGKCGR-------- 256
+ SL CG L+ G +H H K +R + L+ N L+ MY KCG+
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHR---HLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVF 105
Query: 257 --MDL---------------------AYKVFATMDERNVSSWTSLIVGYAMHGHVNEALE 293
M L A VF +M ER+V SW ++++GYA G+++EAL
Sbjct: 106 DQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALW 165
Query: 294 CFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLL 353
+ R +G++ N +F G+L+ACV ++Q R + V G + ++D
Sbjct: 166 FYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVL-VAGFLSNVVLSCSIIDAY 224
Query: 354 GRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGE 395
+ G ++ A + +EM +K I W L+ G++E E
Sbjct: 225 AKCGQMESAKRCFDEMTVKDIHI-WTTLISGYAKLGDMEAAE 265
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 173/306 (56%), Gaps = 4/306 (1%)
Query: 148 YCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTM 207
Y G AR F++ P+ SWN++I + ++A+ +F+ M G PD T+
Sbjct: 353 YASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTL 412
Query: 208 VSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATM 267
SL SA + +L+LG+Q+H V D+ + N+L+ MY +CG + + ++F M
Sbjct: 413 TSLLSASTGLVNLRLGMQMHQIVVKTVIP---DVPVHNALITMYSRCGEIMESRRIFDEM 469
Query: 268 D-ERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEG 326
+R V +W ++I GYA HG+ +EAL F M+ G+ P+++TFV VL+AC H G V E
Sbjct: 470 KLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEA 529
Query: 327 RCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACE 386
+ F M +VY I P+++HY +V++ G +EAM ++ MP +P+ VWG L+ AC
Sbjct: 530 KAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACR 589
Query: 387 TYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAY 446
Y NV + A+ + LEP + YV+L N+YA+ G+W E ++R +M+ R+ K
Sbjct: 590 IYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGS 649
Query: 447 SLTTNS 452
S +S
Sbjct: 650 SWVDSS 655
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 114/236 (48%), Gaps = 6/236 (2%)
Query: 57 LRTHFLESNPAP--FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVC 114
L H+ E P +WN+II Y + + + A+ L + M G PD +TL +L A
Sbjct: 361 LARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAST 420
Query: 115 QSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDE-NPDPKLGSWN 173
+ LG Q+H + VK + + I +Y + GE +R +FDE ++ +WN
Sbjct: 421 GLVNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWN 479
Query: 174 AVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHA 233
A+IGG + G A +A+ +F +M+ +G P +T VS+ +AC G + +
Sbjct: 480 AMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSV 539
Query: 234 KAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMD-ERNVSSWTSLIVGYAMHGHV 288
E + ++SLV++ G+ + A + +M E + + W +L+ ++ +V
Sbjct: 540 YKIE-PQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNV 594
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 145 INLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDG 204
+N +SG AR +F++ +WN +I G + A ++F M +
Sbjct: 47 LNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWN 106
Query: 205 VTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVF 264
TM+S +CG + L+ +L D WN+++ Y K R+ A +F
Sbjct: 107 -TMISGYVSCGGIRFLEEARKLF------DEMPSRDSFSWNTMISGYAKNRRIGEALLLF 159
Query: 265 ATMDERNVSSWTSLIVGYAMHGHVNEALECF 295
M ERN SW+++I G+ +G V+ A+ F
Sbjct: 160 EKMPERNAVSWSAMITGFCQNGEVDSAVVLF 190
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 133/339 (39%), Gaps = 61/339 (17%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN +I Y + A +L +M + V+ T ++ I ++ L
Sbjct: 74 WNTMISGYVKRREMNQARKLFDVMPKRDVV----TWNTMISGYVSCGGIRFLEEARKLFD 129
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
++ + + I+ Y K+ A ++F++ P+ SW+A+I G Q G A+
Sbjct: 130 EMP-SRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVV 188
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDIL-MWNSLVD 249
+F M +P C V L + + + +E +L + SLV
Sbjct: 189 LFRKMPVKDSSP----------LCALVAGL---------IKNERLSEAAWVLGQYGSLV- 228
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFW------CMREAGV 303
GR DL Y ++ +LIVGY G V EA C + C + G
Sbjct: 229 ----SGREDLVY------------AYNTLIVGYGQRGQV-EAARCLFDQIPDLCGDDHGG 271
Query: 304 R------PNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAG 357
N V++ ++ A + G V R FD MK+ I+ + M+D
Sbjct: 272 EFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTIS-----WNTMIDGYVHVS 326
Query: 358 LLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEY 396
+++A + EMP + ++ W ++ + GNVE+ +
Sbjct: 327 RMEDAFALFSEMPNR-DAHSWNMMVSGYASVGNVELARH 364
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 202/384 (52%), Gaps = 8/384 (2%)
Query: 66 PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRA-GVLPDRYTLPIVLKAVCQSFAIELGKQ 124
P W ++ +++ + AL L M R G++PD T VL A ++ GK+
Sbjct: 227 PDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKE 286
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGL 184
+H + G+ +N E+ +++Y K G AR VF+ SW+A++GG Q G
Sbjct: 287 IHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGE 346
Query: 185 ARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMW 244
AI +F M G + AC + ++LG ++H + + ++++
Sbjct: 347 HEKAIEIFREMEEKDLYCFGTVL----KACAGLAAVRLGKEIHG--QYVRRGCFGNVIVE 400
Query: 245 NSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVR 304
++L+D+YGK G +D A +V++ M RN+ +W +++ A +G EA+ F M + G++
Sbjct: 401 SALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIK 460
Query: 305 PNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMK 364
P+Y++F+ +L+AC H G V EGR YF +M YGI P +HY CM+DLLGRAGL +EA
Sbjct: 461 PDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAEN 520
Query: 365 MVEEMPMKPNSIVWGCLMGACETYGNV-EMGEYVAKHLQALEPWNDGAYVVLSNIYANKG 423
++E + ++ +WG L+G C + + E +AK + LEP +YV+LSN+Y G
Sbjct: 521 LLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIG 580
Query: 424 MWKEVERIRSSMKEGRLAKVPAYS 447
+ IR M +AK S
Sbjct: 581 RHGDALNIRKLMVRRGVAKTVGQS 604
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 166/331 (50%), Gaps = 21/331 (6%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
+W +++ Y + AL + V M+ G+ + +TL +KA + + LG+ H +
Sbjct: 129 ISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGV 188
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
+ G + N + + LY + E AR VFDE P+P + W AV+ S+ L +A
Sbjct: 189 VITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEA 248
Query: 189 IRVFVNMRR-HGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSL 247
+ +F M R G PDG T ++ +ACG++ L+ G ++H + +++++ +SL
Sbjct: 249 LGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIG--SNVVVESSL 306
Query: 248 VDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNY 307
+DMYGKCG + A +VF M ++N SW++L+ GY +G +A+E F M E +
Sbjct: 307 LDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEE----KDL 362
Query: 308 VTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYG------CMVDLLGRAGLLDE 361
F VL AC V+ G K ++G R +G ++DL G++G +D
Sbjct: 363 YCFGTVLKACAGLAAVRLG-------KEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDS 415
Query: 362 AMKMVEEMPMKPNSIVWGCLMGACETYGNVE 392
A ++ +M ++ N I W ++ A G E
Sbjct: 416 ASRVYSKMSIR-NMITWNAMLSALAQNGRGE 445
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 143/309 (46%), Gaps = 27/309 (8%)
Query: 109 VLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGE-FTSARMVFDENPDP 167
+L+ + F+ G Q H+ VK GL+T+ ++LY K G R VFD
Sbjct: 67 LLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVK 126
Query: 168 KLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLH 227
SW +++ G G A+ VFV M G + T+ S AC +G+++LG H
Sbjct: 127 DAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFH 186
Query: 228 TCVYHAKAAERTDILMWNSLVD-----MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGY 282
V T WN + +YG A +VF M E +V WT+++ +
Sbjct: 187 GVVI-------THGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAF 239
Query: 283 AMHGHVNEALECFWCM-REAGVRPNYVTFVGVLSACVHGGKVQEGR-CYFDMMKNVYGIT 340
+ + EAL F+ M R G+ P+ TF VL+AC + ++++G+ + ++ N GI
Sbjct: 240 SKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITN--GIG 297
Query: 341 PRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKH 400
+ ++D+ G+ G + EA ++ M K NS+ W L+G G + GE H
Sbjct: 298 SNVVVESSLLDMYGKCGSVREARQVFNGMS-KKNSVSWSALLG-----GYCQNGE----H 347
Query: 401 LQALEPWND 409
+A+E + +
Sbjct: 348 EKAIEIFRE 356
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 13/207 (6%)
Query: 183 GLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDIL 242
G +AIR+ + SL C V G+Q H V K+ TD
Sbjct: 40 GQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHV--VKSGLETDRN 97
Query: 243 MWNSLVDMYGKCGR-MDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREA 301
+ NSL+ +Y K G M +VF ++ SWTS++ GY +ALE F M
Sbjct: 98 VGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSF 157
Query: 302 GVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQ--HY--GCMVDLLGRAG 357
G+ N T + AC G+V+ GRC+ ++ IT + H+ + L G
Sbjct: 158 GLDANEFTLSSAVKACSELGEVRLGRCFHGVV-----ITHGFEWNHFISSTLAYLYGVNR 212
Query: 358 LLDEAMKMVEEMPMKPNSIVWGCLMGA 384
+A ++ +EMP +P+ I W ++ A
Sbjct: 213 EPVDARRVFDEMP-EPDVICWTAVLSA 238
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 123/409 (30%), Positives = 197/409 (48%), Gaps = 41/409 (10%)
Query: 63 ESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELG 122
E P W +++ C+++ + L+ LM +G L + + A+ +
Sbjct: 254 EFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIA 313
Query: 123 KQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNA-------- 174
++VH +K G + I++Y K G+ A +F + + + SWN+
Sbjct: 314 EKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDA 373
Query: 175 -------------------------------VIGGLSQGGLARDAIRVFVNMRRHGFAPD 203
VI G + G D++ F M+ +
Sbjct: 374 GKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLAN 433
Query: 204 GVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKV 263
VT+ + S C + L LG ++H V +E +IL+ N+LV+MY KCG + V
Sbjct: 434 SVTICCILSICAELPALNLGREIHGHVIRTSMSE--NILVQNALVNMYAKCGLLSEGSLV 491
Query: 264 FATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKV 323
F + ++++ SW S+I GY MHG +AL F M +G P+ + V VLSAC H G V
Sbjct: 492 FEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLV 551
Query: 324 QEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMG 383
++GR F M +G+ P+ +HY C+VDLLGR G L EA ++V+ MPM+P V G L+
Sbjct: 552 EKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLN 611
Query: 384 ACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIR 432
+C + NV++ E +A L LEP G+Y++LSNIY+ G W+E +R
Sbjct: 612 SCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVR 660
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 129/301 (42%), Gaps = 37/301 (12%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN+I++ NAL L+ M + G+ D Y LP++L+A L + H+ +
Sbjct: 126 WNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVI 185
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
+IGL+ N + + LY K+G A +F E P SWN +I G SQ A++
Sbjct: 186 QIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVK 245
Query: 191 VFVNMRRHGFAPDGVTMVSLT---SACGSVGDL-----------------QLGLQLHTCV 230
+F M+R F PD VT S+ S CG D+ L + C
Sbjct: 246 IFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCA 305
Query: 231 -------------YHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTS 277
Y K + N+L+ +YGK G++ A +F + + + SW S
Sbjct: 306 ELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNS 365
Query: 278 LIVGYAMHGHVNEALECFWCMRE----AGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMM 333
LI + G ++EAL F + E V+ N VT+ V+ C G+ + YF M
Sbjct: 366 LITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQM 425
Query: 334 K 334
+
Sbjct: 426 Q 426
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 112/302 (37%), Positives = 173/302 (57%), Gaps = 1/302 (0%)
Query: 142 TGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFA 201
T I+ Y K G+ SAR +F+E + +W+A+I G +Q G +A +VF M
Sbjct: 242 TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVK 301
Query: 202 PDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAY 261
PD MV L SAC +G +L ++ + + H + + + + +L+DM KCG MD A
Sbjct: 302 PDEFIMVGLMSACSQMGCFELCEKVDSYL-HQRMNKFSSHYVVPALIDMNAKCGHMDRAA 360
Query: 262 KVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGG 321
K+F M +R++ S+ S++ G A+HG +EA+ F M + G+ P+ V F +L C
Sbjct: 361 KLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSR 420
Query: 322 KVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCL 381
V+EG YF++M+ Y I HY C+V+LL R G L EA ++++ MP + ++ WG L
Sbjct: 421 LVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSL 480
Query: 382 MGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLA 441
+G C +GN E+ E VA+HL LEP + G+YV+LSNIYA W +V +R M E +
Sbjct: 481 LGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGIT 540
Query: 442 KV 443
K+
Sbjct: 541 KI 542
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 146/314 (46%), Gaps = 21/314 (6%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVL-PDRYTLPIVLKAVCQSFAIELGK 123
+P + WN++I+ Y+ + + + M+R G+ PD YT P+V+K + + +G
Sbjct: 71 SPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGS 130
Query: 124 QVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGG 183
VH L ++IG + T F++ Y K + SAR VF E P+ SW A++ + G
Sbjct: 131 SVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSG 190
Query: 184 LARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILM 243
+A +F M + +L GDL +L + DI+
Sbjct: 191 ELEEAKSMFDLMPERNLG----SWNALVDGLVKSGDLVNAKKLFD------EMPKRDIIS 240
Query: 244 WNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGV 303
+ S++D Y K G M A +F +V +W++LI+GYA +G NEA + F M V
Sbjct: 241 YTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNV 300
Query: 304 RPNYVTFVGVLSACVHGG---KVQEGRCYFDMMKNVYGITPRLQHY--GCMVDLLGRAGL 358
+P+ VG++SAC G ++ Y N + HY ++D+ + G
Sbjct: 301 KPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFS-----SHYVVPALIDMNAKCGH 355
Query: 359 LDEAMKMVEEMPMK 372
+D A K+ EEMP +
Sbjct: 356 MDRAAKLFEEMPQR 369
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 124/292 (42%), Gaps = 36/292 (12%)
Query: 160 VFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFA-PDGVTMVSLTSACGSVG 218
VF+ P P WN +I G S L + + + + M R G A PD T + C + G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 219 DLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSL 278
+++G +H V + D+++ S VD YGKC + A KVF M ERN SWT+L
Sbjct: 125 QVRVGSSVHGLVL--RIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTAL 182
Query: 279 IVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMM--KNV 336
+V Y G + EA F M E N ++ ++ V G + + FD M +++
Sbjct: 183 VVAYVKSGELEEAKSMFDLMPER----NLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDI 238
Query: 337 YGITPRLQHY---GCMV---DLLGRA------------------GLLDEAMKMVEEM--- 369
T + Y G MV DL A G +EA K+ EM
Sbjct: 239 ISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAK 298
Query: 370 PMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYAN 421
+KP+ + LM AC G E+ E V +L YVV + I N
Sbjct: 299 NVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMN 350
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 108/227 (47%), Gaps = 11/227 (4%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHS-LG 129
W+ +I Y + P A ++ M V PD + + ++ A Q EL ++V S L
Sbjct: 272 WSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLH 331
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
++ ++ Y I++ K G A +F+E P L S+ +++ G++ G +AI
Sbjct: 332 QRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAI 391
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILM----WN 245
R+F M G PD V + CG ++ GL+ Y ++ IL ++
Sbjct: 392 RLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLR-----YFELMRKKYSILASPDHYS 446
Query: 246 SLVDMYGKCGRMDLAYKVFATMD-ERNVSSWTSLIVGYAMHGHVNEA 291
+V++ + G++ AY++ +M E + S+W SL+ G ++HG+ A
Sbjct: 447 CIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIA 493
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 214 bits (546), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 115/317 (36%), Positives = 181/317 (57%), Gaps = 7/317 (2%)
Query: 135 QTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVN 194
+ N + + ++ Y + G+ AR +F L WN +I G +Q G + DAI F N
Sbjct: 205 EKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFN 264
Query: 195 MRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKC 254
M+ G+ PD VT+ S+ SAC G L +G ++H+ + H + E + N+L+DMY KC
Sbjct: 265 MQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINH-RGIELNQFVS-NALIDMYAKC 322
Query: 255 GRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVL 314
G ++ A VF ++ R+V+ S+I A+HG EALE F M ++P+ +TF+ VL
Sbjct: 323 GDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVL 382
Query: 315 SACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPN 374
+ACVHGG + EG F MK + P ++H+GC++ LLGR+G L EA ++V+EM +KPN
Sbjct: 383 TACVHGGFLMEGLKIFSEMKT-QDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPN 441
Query: 375 SIVWGCLMGACETYGNVEMGEYVAKHLQA----LEPWNDGAYVVLSNIYANKGMWKEVER 430
V G L+GAC+ + + EM E V K ++ +++ +SN+YA+ W+ E
Sbjct: 442 DTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEA 501
Query: 431 IRSSMKEGRLAKVPAYS 447
+R M++ L K P S
Sbjct: 502 LRVEMEKRGLEKSPGLS 518
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 156/336 (46%), Gaps = 41/336 (12%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKA-VCQSFAIELGKQVHS 127
F+ +N+I+ + +P AL L+ + R GV + +P++L+A C + LGK +HS
Sbjct: 12 FHVSNLIKNHISRGSPIQALVLYGGIRRRGVYFPGW-VPLILRACACVVPRVVLGKLLHS 70
Query: 128 LGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARD 187
+K G+ ++ + I++Y K G SAR VFDE P+ + +WNA+IGG G A
Sbjct: 71 ESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVL 130
Query: 188 AIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSL 247
A +F + + VT + + G +++ +L + E ++ W+ +
Sbjct: 131 ASGLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKAREL----FERMPFELKNVKAWSVM 183
Query: 248 VDMYGKCGRMDLAYKVFATMDERNVSSWT------------------------------- 276
+ +Y +M+ A K F + E+N W+
Sbjct: 184 LGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWN 243
Query: 277 SLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNV 336
+LI GYA +G+ ++A++ F+ M+ G P+ VT +LSAC G++ GR ++ N
Sbjct: 244 TLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLI-NH 302
Query: 337 YGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMK 372
GI ++D+ + G L+ A + E + ++
Sbjct: 303 RGIELNQFVSNALIDMYAKCGDLENATSVFESISVR 338
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 98/197 (49%), Gaps = 2/197 (1%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN +I Y + +A+ M G PD T+ +L A QS +++G++VHSL
Sbjct: 242 WNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLIN 301
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
G++ N++ I++Y K G+ +A VF+ + N++I L+ G ++A+
Sbjct: 302 HRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALE 361
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDM 250
+F M PD +T +++ +AC G L GL++ + + + ++ + L+ +
Sbjct: 362 MFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDV--KPNVKHFGCLIHL 419
Query: 251 YGKCGRMDLAYKVFATM 267
G+ G++ AY++ M
Sbjct: 420 LGRSGKLKEAYRLVKEM 436
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 214 bits (546), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 136/426 (31%), Positives = 217/426 (50%), Gaps = 49/426 (11%)
Query: 64 SNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFA-IELG 122
S +W ++ ++R N+++L V M R V D ++ + L VC +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSV-VCLFGVCAKLEDLGFA 130
Query: 123 KQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIG----- 177
+Q H + VK+G+ T+ +++Y K G + + +F+E + + SW V+
Sbjct: 131 QQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKW 190
Query: 178 -GLSQG-------------------------GLARDAIRVFVNMR-RHGFAPDGVTMVSL 210
GL +G G R+ + + M R G + VT+ S+
Sbjct: 191 EGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSM 250
Query: 211 TSACGSVGDLQLGLQLHTCVYHAKA-------AERTDILMWNSLVDMYGKCGRMDLAYKV 263
SAC G+L +G +H VY K A D+++ +LVDMY KCG +D + V
Sbjct: 251 LSACAQSGNLVVGRWVH--VYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNV 308
Query: 264 FATMDERNVSSWTSLIVGYAMHGHVNEALECFWCM-REAGVRPNYVTFVGVLSACVHGGK 322
F M +RNV +W +L G AMHG ++ F M RE V+P+ +TF VLSAC H G
Sbjct: 309 FRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE--VKPDDLTFTAVLSACSHSGI 366
Query: 323 VQEG-RCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCL 381
V EG RC+ + YG+ P++ HY CMVDLLGRAGL++EA ++ EMP+ PN +V G L
Sbjct: 367 VDEGWRCFHSL--RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSL 424
Query: 382 MGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLA 441
+G+C +G VE+ E + + L + P N +++SN+Y +G + +R S+++ +
Sbjct: 425 LGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIR 484
Query: 442 KVPAYS 447
K+P S
Sbjct: 485 KIPGLS 490
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 127/314 (40%), Gaps = 45/314 (14%)
Query: 122 GKQVHSLGVKIGLQT--NEYCETGFINLYCKSGEFTSARMVFDENP--DPKLGSWNAVIG 177
GK++H++ GL+ Y Y SGE +A+ +FDE P + W ++
Sbjct: 25 GKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLS 84
Query: 178 GLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAE 237
S+ GL +++++FV MRR D V++V L C + DL Q H K
Sbjct: 85 SFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVA--VKMGV 142
Query: 238 RTDILMWNSLVDMYGKCGR-------------------------------MDLAYKVFAT 266
T + + N+L+DMYGKCG ++ +VF
Sbjct: 143 LTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHE 202
Query: 267 MDERNVSSWTSLIVGYAMHGHVNEALECFWCMR-EAGVRPNYVTFVGVLSACVHGGKVQE 325
M ERN +WT ++ GY G E LE M G N+VT +LSAC G +
Sbjct: 203 MPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVV 262
Query: 326 GRCYF------DMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWG 379
GR +MM + +VD+ + G +D +M + M K N + W
Sbjct: 263 GRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMR-KRNVVTWN 321
Query: 380 CLMGACETYGNVEM 393
L +G M
Sbjct: 322 ALFSGLAMHGKGRM 335
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 98/231 (42%), Gaps = 13/231 (5%)
Query: 210 LTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFAT--M 267
L C L+ G +LH + + + + N+L Y G M A K+F +
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 268 DERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVH---GGKVQ 324
E++ WT+L+ ++ +G + +++ F MR V + V+ V + C G Q
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 325 EGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGA 384
+G M G+ ++ ++D+ G+ GL+ E ++ EE+ K + + W ++
Sbjct: 132 QGHGVAVKM----GVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEK-SVVSWTVVLDT 186
Query: 385 CETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSM 435
+ +E G V + N A+ V+ Y G +EV + + M
Sbjct: 187 VVKWEGLERGREV---FHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEM 234
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 171/306 (55%), Gaps = 2/306 (0%)
Query: 142 TGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFA 201
T I + GE + +F P+ +W A+I G +A+ F M +
Sbjct: 376 TDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVC 435
Query: 202 PDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAY 261
P+ T S+ SA S+ DL GLQ+H V K D+ + NSLV MY KCG + AY
Sbjct: 436 PNSYTFSSVLSATASLADLIEGLQIHGRV--VKMNIVNDLSVQNSLVSMYCKCGNTNDAY 493
Query: 262 KVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGG 321
K+F+ + E N+ S+ ++I GY+ +G +AL+ F + +G PN VTF+ +LSACVH G
Sbjct: 494 KIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVG 553
Query: 322 KVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCL 381
V G YF MK+ Y I P HY CMVDLLGR+GLLD+A ++ MP KP+S VWG L
Sbjct: 554 YVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSL 613
Query: 382 MGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLA 441
+ A +T+ V++ E AK L LEP + YVVLS +Y+ G ++ +RI + K R+
Sbjct: 614 LSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIK 673
Query: 442 KVPAYS 447
K P S
Sbjct: 674 KDPGSS 679
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 112/267 (41%), Gaps = 37/267 (13%)
Query: 122 GKQVHSLGVKIGLQTNEYCE-TGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLS 180
GK ++ V G+ E + ++ YCK G AR +FD + + +W A+I G
Sbjct: 191 GKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYF 250
Query: 181 QGGLARDAIRVFVNMRRHG-FAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERT 239
+ G D +F+ MR+ G + T+ + AC + G Q+H V ++
Sbjct: 251 KAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLV--SRMPLEF 308
Query: 240 DILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECF---- 295
D+ + NSL+ MY K G M A VF M ++ SW SLI G ++EA E F
Sbjct: 309 DLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMP 368
Query: 296 ------W---------------CMREAGVRP--NYVTFVGVLSACVHGGKVQEGRCYFDM 332
W C+ G+ P + +T+ ++SA V G +E C+F
Sbjct: 369 GKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHK 428
Query: 333 M------KNVYGITPRLQHYGCMVDLL 353
M N Y + L + DL+
Sbjct: 429 MLQKEVCPNSYTFSSVLSATASLADLI 455
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 2/222 (0%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
W +I + AL ML+ V P+ YT VL A + G Q+H V
Sbjct: 406 WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVV 465
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
K+ + + + +++YCK G A +F +P + S+N +I G S G + A++
Sbjct: 466 KMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALK 525
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDM 250
+F + G P+GVT ++L SAC VG + LG + + + E + +VD+
Sbjct: 526 LFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPD-HYACMVDL 584
Query: 251 YGKCGRMDLAYKVFATMDERNVSS-WTSLIVGYAMHGHVNEA 291
G+ G +D A + +TM + S W SL+ H V+ A
Sbjct: 585 LGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLA 626
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 179/314 (57%), Gaps = 5/314 (1%)
Query: 137 NEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMR 196
N C T + Y +G AR++F+ +P + W A++ G Q +A+ +F M+
Sbjct: 212 NVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQ 271
Query: 197 RHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGR 256
G PD +VSL + C G L+ G +H + + D ++ +LVDMY KCG
Sbjct: 272 TAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVT--VDKVVGTALVDMYAKCGC 329
Query: 257 MDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSA 316
++ A +VF + ER+ +SWTSLI G AM+G AL+ ++ M GVR + +TFV VL+A
Sbjct: 330 IETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTA 389
Query: 317 CVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSI 376
C HGG V EGR F M + + P+ +H C++DLL RAGLLDEA +++++M + +
Sbjct: 390 CNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDET 449
Query: 377 ---VWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRS 433
V+ L+ A YGNV++ E VA+ L+ +E + A+ +L+++YA+ W++V +R
Sbjct: 450 LVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRR 509
Query: 434 SMKEGRLAKVPAYS 447
MK+ + K P S
Sbjct: 510 KMKDLGIRKFPGCS 523
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 170/357 (47%), Gaps = 40/357 (11%)
Query: 62 LESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIEL 121
L P+ +N +++ ++ L L + G+ PD +TLP+VLK++ + +
Sbjct: 5 LLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIE 64
Query: 122 GKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQ 181
G++VH VK GL+ + Y + +Y G+ VFDE P + SWN +I
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 182 GGLARDAIRVFVNMRRHG-FAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTD 240
G DAI VF M + D T+VS SAC ++ +L++G +++ V
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV---TEFEMS 181
Query: 241 ILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYA----------------- 283
+ + N+LVDM+ KCG +D A VF +M ++NV WTS++ GY
Sbjct: 182 VRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPV 241
Query: 284 ---------MHGHV-----NEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCY 329
M+G+V +EALE F CM+ AG+RP+ V +L+ C G +++G+ +
Sbjct: 242 KDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGK-W 300
Query: 330 FDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKP----NSIVWGCLM 382
N +T +VD+ + G ++ A+++ E+ + S+++G M
Sbjct: 301 IHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAM 357
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 13/229 (5%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
W ++ Y + AL L M AG+ PD + L +L Q+ A+E GK +H
Sbjct: 247 WTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYIN 306
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
+ + ++ T +++Y K G +A VF E + SW ++I GL+ G++ A+
Sbjct: 307 ENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALD 366
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNS---- 246
++ M G D +T V++ +AC G + G + ++H+ ER ++ +
Sbjct: 367 LYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRK----IFHS-MTERHNVQPKSEHCSC 421
Query: 247 LVDMYGKCGRMDLAYKVFATM----DERNVSSWTSLIVGYAMHGHVNEA 291
L+D+ + G +D A ++ M DE V + SL+ +G+V A
Sbjct: 422 LIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIA 470
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 211 bits (538), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 129/388 (33%), Positives = 204/388 (52%), Gaps = 15/388 (3%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAI---ELGK---Q 124
WN++I + + A+ + + M GV DR TL + ++ +S + E+ K Q
Sbjct: 229 WNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQ 288
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGE-FTSARMVFDENPDPK-LGSWNAVIGGLSQG 182
+HSL VK GL T T I +Y + E +T +F E + + +WN +I +
Sbjct: 289 LHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVY 348
Query: 183 GLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDIL 242
R AI +F +R+ +PD T S+ AC + + L +H V K D +
Sbjct: 349 DPER-AIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVI--KGGFLADTV 405
Query: 243 MWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAG 302
+ NSL+ Y KCG +DL +VF MD R+V SW S++ Y++HG V+ L F ++
Sbjct: 406 LNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVF---QKMD 462
Query: 303 VRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEA 362
+ P+ TF+ +LSAC H G+V+EG F M P+L HY C++D+L RA EA
Sbjct: 463 INPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEA 522
Query: 363 MKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQAL-EPWNDGAYVVLSNIYAN 421
+++++MPM P+++VW L+G+C +GN +G+ A L+ L EP N +Y+ +SNIY
Sbjct: 523 EEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNA 582
Query: 422 KGMWKEVERIRSSMKEGRLAKVPAYSLT 449
+G + E M+ R+ K P S T
Sbjct: 583 EGSFNEANLSIKEMETWRVRKEPDLSWT 610
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 159/370 (42%), Gaps = 57/370 (15%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+W +I Y + + L ML + P+ +TL VL + C+ E GKQVH L
Sbjct: 129 SWTALITGYVQAGNEQEGFCLFSSML-SHCFPNEFTLSSVLTS-CR---YEPGKQVHGLA 183
Query: 130 VKIGLQTNEYCETGFINLY--CKSGEFT-SARMVFDENPDPKLGSWNAVIGGLSQGGLAR 186
+K+GL + Y I++Y C G A VF+ L +WN++I L +
Sbjct: 184 LKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGK 243
Query: 187 DAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDL------QLGLQLHTCVYHAKAAERTD 240
AI VF+ M G D T++++ S+ DL + LQLH+ + +T+
Sbjct: 244 KAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTE 303
Query: 241 -----ILMWNSLVDMYGKCGRMDLAYKVFATMDE-RNVSSWTSLIVGYAMHGHVNEALEC 294
I +++ +++ Y C YK+F M R++ +W +I +A++ A+
Sbjct: 304 VATALIKVYSEMLEDYTDC------YKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHL 356
Query: 295 FWCMREAGVRPNYVTFVGVLSAC-----------VHGGKVQEG----------------R 327
F +R+ + P++ TF VL AC +H ++ G +
Sbjct: 357 FGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAK 416
Query: 328 C-YFDMMKNVYG--ITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGA 384
C D+ V+ + + + M+ G +D + + ++M + P+S + L+ A
Sbjct: 417 CGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDSATFIALLSA 476
Query: 385 CETYGNVEMG 394
C G VE G
Sbjct: 477 CSHAGRVEEG 486
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 85/181 (46%), Gaps = 20/181 (11%)
Query: 144 FINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPD 203
IN+Y K G AR VFD P+ + SW A+I G Q G ++ +F +M H F P+
Sbjct: 102 LINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PN 160
Query: 204 GVTMVSLTSAC-----GSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMD 258
T+ S+ ++C V L L L LH +Y A N+++ MYG+C
Sbjct: 161 EFTLSSVLTSCRYEPGKQVHGLALKLGLHCSIYVA-----------NAVISMYGRCHDGA 209
Query: 259 LAYK---VFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLS 315
AY+ VF + +N+ +W S+I + +A+ F M GV + T + + S
Sbjct: 210 AAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICS 269
Query: 316 A 316
+
Sbjct: 270 S 270
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 92/201 (45%), Gaps = 20/201 (9%)
Query: 209 SLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMD 268
+L AC +L G+ LH + ++++ N L++MY KCG + A +VF TM
Sbjct: 64 ALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMP 123
Query: 269 ERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSAC-------VHGG 321
ERNV SWT+LI GY G+ E C + + PN T VL++C VHG
Sbjct: 124 ERNVVSWTALITGYVQAGNEQEGF-CLFSSMLSHCFPNEFTLSSVLTSCRYEPGKQVHGL 182
Query: 322 KVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCL 381
++ G + ++Y + YG D G A EA + E + K N + W +
Sbjct: 183 ALKLG-----LHCSIYVANAVISMYGRCHD--GAAAY--EAWTVFEAIKFK-NLVTWNSM 232
Query: 382 MGA--CETYGNVEMGEYVAKH 400
+ A C G +G ++ H
Sbjct: 233 IAAFQCCNLGKKAIGVFMRMH 253
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 211 bits (538), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 133/441 (30%), Positives = 223/441 (50%), Gaps = 13/441 (2%)
Query: 13 YSVSQRSITQTL-LLDSANNPVTLIATQLCNCTHIHQLNQVYAHILRTHFLESNPAPFNW 71
YS S+ S++ L +L S ++ +LI + +C + +L + + LR + +W
Sbjct: 490 YSCSKFSLSTVLAILTSCDSSDSLIFGKSVHC-WLQKLGDLTSAFLRLETMSETRDLTSW 548
Query: 72 NNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIEL---GKQVHSL 128
N++I +LR M R G + R+ L +L + S + L G+ H L
Sbjct: 549 NSVISGCASSGHHLESLRAFQAMSREGKI--RHDLITLLGTISASGNLGLVLQGRCFHGL 606
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
+K + + + I +Y + + SA VF DP L SWN VI LSQ R+
Sbjct: 607 AIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREV 666
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
++F N++ P+ +T V L SA +G G+Q H + + + + + +LV
Sbjct: 667 FQLFRNLK---LEPNEITFVGLLSASTQLGSTSYGMQAH--CHLIRRGFQANPFVSAALV 721
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMRE-AGVRPNY 307
DMY CG ++ KVF ++S+W S+I + HG +A+E F + + + PN
Sbjct: 722 DMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNK 781
Query: 308 VTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVE 367
+F+ +LSAC H G + EG Y+ M+ +G+ P +H +VD+LGRAG L EA + +
Sbjct: 782 SSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFIT 841
Query: 368 EMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKE 427
+ + VWG L+ AC +G+ ++G+ VA+ L +EP N Y+ L+N Y G W+E
Sbjct: 842 GIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEE 901
Query: 428 VERIRSSMKEGRLAKVPAYSL 448
R+R +++ L K+P YS+
Sbjct: 902 AVRLRKMVEDNALKKLPGYSV 922
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 124/273 (45%), Gaps = 16/273 (5%)
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGL 184
+H L ++ GL + +NLY K +SA VF + SWN ++ G
Sbjct: 210 LHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGH 269
Query: 185 ARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMW 244
R +++ F +M G D VT + SAC S+ +L LG LH V + + + +
Sbjct: 270 PRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVG 329
Query: 245 NSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAG-V 303
NS++ MY KCG + A VF + R+V S +++ G+A +G EA M+ +
Sbjct: 330 NSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKI 389
Query: 304 RPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPR-------LQHYGCMVDLLGRA 356
+P+ T V + S C +EGR V+G T R L+ ++D+ G+
Sbjct: 390 QPDIATVVSITSICGDLSFSREGRA-------VHGYTVRMEMQSRALEVINSVIDMYGKC 442
Query: 357 GLLDEAMKMVEEMPMKPNSIVWGCLMGACETYG 389
GL +A +++ + + + W ++ A G
Sbjct: 443 GLTTQA-ELLFKTTTHRDLVSWNSMISAFSQNG 474
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 109/229 (47%), Gaps = 4/229 (1%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WN I+ PR +L+ M +G D T V+ A + LG+ +H L
Sbjct: 256 SWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLV 315
Query: 130 VKIGLQTNEYCETG--FINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARD 187
+K G + G I++Y K G+ +A VF+E + S NA++ G + G+ +
Sbjct: 316 IKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEE 375
Query: 188 AIRVFVNMRR-HGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNS 246
A + M+ PD T+VS+TS CG + + G +H + R + + NS
Sbjct: 376 AFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRA-LEVINS 434
Query: 247 LVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECF 295
++DMYGKCG A +F T R++ SW S+I ++ +G ++A F
Sbjct: 435 VIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLF 483
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 123/267 (46%), Gaps = 7/267 (2%)
Query: 108 IVLKAVCQSFAI----ELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDE 163
+ L+ V +SF + E + VH +K GL + + + Y ++GE S+ +FDE
Sbjct: 88 MFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDE 147
Query: 164 NPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLG 223
+ + WN++I L+Q G A+ +F+ M G D T++ SA S+ +
Sbjct: 148 LKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKC 207
Query: 224 LQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYA 283
LH D + N+L+++Y K + A VF M+ R++ SW +++
Sbjct: 208 SMLHCLAIETGLV--GDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCL 265
Query: 284 MHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDM-MKNVYGITPR 342
+GH ++L+ F M +G + VTF V+SAC ++ G + +K+ Y
Sbjct: 266 ANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAH 325
Query: 343 LQHYGCMVDLLGRAGLLDEAMKMVEEM 369
+ ++ + + G + A + EE+
Sbjct: 326 VSVGNSIISMYSKCGDTEAAETVFEEL 352
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 211 bits (537), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 122/377 (32%), Positives = 203/377 (53%), Gaps = 4/377 (1%)
Query: 73 NIIRCYTRLEAPRN-ALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVK 131
N++ T + + ++ A+ + + M GV P+ T ++ AV + I+ G ++H L +K
Sbjct: 341 NVVSWTTMISSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIK 400
Query: 132 IGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRV 191
G + FI LY K A+ F++ ++ SWNA+I G +Q G + +A+++
Sbjct: 401 TGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKM 460
Query: 192 FVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHA-KAAERTDILMWNSLVDM 250
F++ P+ T S+ +A D+ + Q C H K + ++ ++L+DM
Sbjct: 461 FLSAAAETM-PNEYTFGSVLNAIAFAEDISVK-QGQRCHAHLLKLGLNSCPVVSSALLDM 518
Query: 251 YGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTF 310
Y K G +D + KVF M ++N WTS+I Y+ HG + F M + V P+ VTF
Sbjct: 519 YAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTF 578
Query: 311 VGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMP 370
+ VL+AC G V +G F+MM VY + P +HY CMVD+LGRAG L EA +++ E+P
Sbjct: 579 LSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVP 638
Query: 371 MKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVER 430
P + ++G+C +GNV+MG VA+ ++P G+YV + NIYA K W +
Sbjct: 639 GGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAE 698
Query: 431 IRSSMKEGRLAKVPAYS 447
IR +M++ ++K +S
Sbjct: 699 IRKAMRKKNVSKEAGFS 715
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 188/410 (45%), Gaps = 48/410 (11%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQ 124
+P +WN I+ + + + AL V M AGV+ D +T L S LG Q
Sbjct: 139 DPDVVSWNTILSGF---DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQ 195
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQ-GG 183
+ S VK GL+++ FI +Y +SG F AR VFDE + SWN+++ GLSQ G
Sbjct: 196 LQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGT 255
Query: 184 LARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLH-TCVYHAKAAERTDIL 242
+A+ +F +M R G D V+ S+ + C DL+L Q+H C+ K + +
Sbjct: 256 FGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCI---KRGYESLLE 312
Query: 243 MWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAG 302
+ N L+ Y KCG ++ VF M ERNV SWT++I + ++A+ F MR G
Sbjct: 313 VGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDG 367
Query: 303 VRPNYVTFVGVLSA----------------CVHGGKVQE---GRCYF----------DMM 333
V PN VTFVG+++A C+ G V E G + D
Sbjct: 368 VYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAK 427
Query: 334 KNVYGITPR-LQHYGCMVDLLGRAGLLDEAMKMVEEMPMK--PNSIVWGCLMGACETYGN 390
K IT R + + M+ + G EA+KM + PN +G ++ A +
Sbjct: 428 KAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAED 487
Query: 391 VEMGEYVAKHLQALEPWNDGAYVVLS---NIYANKGMWKEVERIRSSMKE 437
+ + + H L+ + VV S ++YA +G E E++ + M +
Sbjct: 488 ISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQ 537
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 159/361 (44%), Gaps = 19/361 (5%)
Query: 33 VTLIATQLCNCTHIHQLNQVYAHILRTHFL----ESNPAPFNWNNIIRCYTRLEAPRNAL 88
+TL+ CN + + Y+ H L A + N+ I R +P AL
Sbjct: 1 MTLLNYLHCNRSKSFLFQRFYSPYRIAHKLFDGSSQRNATTSINHSISESLRRNSPARAL 60
Query: 89 RLHVLMLRAGVLP---DRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFI 145
+ L+ G D TL + LKA C+ ++ G Q+H G + +
Sbjct: 61 SIFKENLQLGYFGRHMDEVTLCLALKA-CRG-DLKRGCQIHGFSTTSGFTSFVCVSNAVM 118
Query: 146 NLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGV 205
+Y K+G F +A +F+ DP + SWN ++ G +A + + V M+ G D
Sbjct: 119 GMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQIALNFV---VRMKSAGVVFDAF 175
Query: 206 TMVSLTSAC-GSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVF 264
T + S C GS G L LGLQL + V K +D+++ NS + MY + G A +VF
Sbjct: 176 TYSTALSFCVGSEGFL-LGLQLQSTV--VKTGLESDLVVGNSFITMYSRSGSFRGARRVF 232
Query: 265 ATMDERNVSSWTSLIVGYAMHGHVN-EALECFWCMREAGVRPNYVTFVGVLSACVHGGKV 323
M +++ SW SL+ G + G EA+ F M GV ++V+F V++ C H +
Sbjct: 233 DEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDL 292
Query: 324 QEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMG 383
+ R + G L+ ++ + G+L EA+K V + N + W ++
Sbjct: 293 KLARQIHGLCIK-RGYESLLEVGNILMSRYSKCGVL-EAVKSVFHQMSERNVVSWTTMIS 350
Query: 384 A 384
+
Sbjct: 351 S 351
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/386 (31%), Positives = 199/386 (51%), Gaps = 12/386 (3%)
Query: 41 CNCTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVL 100
C C I +V+ + + ++ ++ Y ++ AL L +M ++ V+
Sbjct: 171 CVCGKISDARKVFDE------MPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVV 224
Query: 101 PDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMV 160
+ TL L A+ + + H L +KIGL + + T I +Y K+G +SAR +
Sbjct: 225 VNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRI 284
Query: 161 FDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDL 220
FD + +WN +I ++ GL + + + M+ P+ T V L S+C
Sbjct: 285 FDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAA 344
Query: 221 QLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIV 280
+G + + + A D ++ +LVDMY K G ++ A ++F M +++V SWT++I
Sbjct: 345 FVGRTVADLLEEERIA--LDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMIS 402
Query: 281 GYAMHGHVNEALECFWCMREAG--VRPNYVTFVGVLSACVHGGKVQEG-RCYFDMMKNVY 337
GY HG EA+ F M E VRPN +TF+ VL+AC HGG V EG RC F M Y
Sbjct: 403 GYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRC-FKRMVEAY 461
Query: 338 GITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYV 397
TP+++HYGC+VDLLGRAG L+EA +++ +P+ +S W L+ AC YGN ++GE V
Sbjct: 462 SFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESV 521
Query: 398 AKHLQALEPWNDGAYVVLSNIYANKG 423
L + + ++L+ +A G
Sbjct: 522 MMRLAEMGETHPADAILLAGTHAVAG 547
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 157/332 (47%), Gaps = 20/332 (6%)
Query: 49 LNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPI 108
L+ YA + H SN F +N +IR Y+ + P A + + G+ DR++
Sbjct: 73 LDIRYASSIFEHV--SNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFIT 130
Query: 109 VLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDP- 167
LK+ + + +G+ +H + ++ G I+ YC G+ + AR VFDE P
Sbjct: 131 TLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSV 190
Query: 168 KLGSWNAVIGG---LSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGL 224
+++ ++ G +S+ LA D R+ MR+ + T++S SA +GDL
Sbjct: 191 DAVTFSTLMNGYLQVSKKALALDLFRI---MRKSEVVVNVSTLLSFLSAISDLGDLSGAE 247
Query: 225 QLHT-CVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYA 283
H C+ K D+ + +L+ MYGK G + A ++F ++V +W +I YA
Sbjct: 248 SAHVLCI---KIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYA 304
Query: 284 MHGHVNEALECFWCMRE---AGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGIT 340
G + EC W +R+ ++PN TFVG+LS+C + GR D+++ I
Sbjct: 305 KTGLLE---ECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEE-ERIA 360
Query: 341 PRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMK 372
+VD+ + GLL++A+++ M K
Sbjct: 361 LDAILGTALVDMYAKVGLLEKAVEIFNRMKDK 392
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 207 bits (528), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 200/384 (52%), Gaps = 3/384 (0%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQ 124
+P WN +I Y + L LM G P+ YT+ + + + +
Sbjct: 169 DPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWS 228
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGL 184
VH+ +KI L ++ Y +N+Y + SA VF+ +P L + +++I G S+ G
Sbjct: 229 VHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGN 288
Query: 185 ARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMW 244
++A+ +F +R G PD V + + +C + D G ++H+ Y + DI +
Sbjct: 289 HKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHS--YVIRLGLELDIKVC 346
Query: 245 NSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVR 304
++L+DMY KCG + A +FA + E+N+ S+ SLI+G +HG + A E F + E G+
Sbjct: 347 SALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLI 406
Query: 305 PNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMK 364
P+ +TF +L C H G + +G+ F+ MK+ +GI P+ +HY MV L+G AG L+EA +
Sbjct: 407 PDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFE 466
Query: 365 MVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAY-VVLSNIYANKG 423
V + +S + G L+ CE + N + E VA+++ Y V+LSN+YA G
Sbjct: 467 FVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYG 526
Query: 424 MWKEVERIRSSMKEGRLAKVPAYS 447
W EVER+R + E K+P S
Sbjct: 527 RWDEVERLRDGISESYGGKLPGIS 550
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 147/315 (46%), Gaps = 7/315 (2%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
F WN+IIR Y + L L +LR+ PD +T + + +SF + + +H +
Sbjct: 72 FLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGI 131
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
+ GL ++ C + + Y K+G A +F PDP L WN +I G G
Sbjct: 132 AIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKG 191
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
I +F M+ G P+ TMV+LTS L + +H + K + + +LV
Sbjct: 192 INLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHA--FCLKINLDSHSYVGCALV 249
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYV 308
+MY +C + A VF ++ E ++ + +SLI GY+ G+ EAL F +R +G +P+ V
Sbjct: 250 NMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCV 309
Query: 309 TFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEE 368
VL +C G+ + + G+ ++ ++D+ + GLL AM +
Sbjct: 310 LVAIVLGSCAELSDSVSGKEVHSYVIRL-GLELDIKVCSALIDMYSKCGLLKCAMSLFAG 368
Query: 369 MPMKP----NSIVWG 379
+P K NS++ G
Sbjct: 369 IPEKNIVSFNSLILG 383
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 3/207 (1%)
Query: 64 SNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGK 123
S P +++I Y+R + AL L + +G PD + IVL + + GK
Sbjct: 269 SEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGK 328
Query: 124 QVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGG 183
+VHS +++GL+ + + I++Y K G A +F P+ + S+N++I GL G
Sbjct: 329 EVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHG 388
Query: 184 LARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAE-RTDIL 242
A A F + G PD +T +L C G L G ++ + E +T+
Sbjct: 389 FASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHY 448
Query: 243 MWNSLVDMYGKCGRMDLAYKVFATMDE 269
++ +V + G G+++ A++ ++ +
Sbjct: 449 VY--MVKLMGMAGKLEEAFEFVMSLQK 473
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 6/198 (3%)
Query: 123 KQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQG 182
+++HS K L + Y T Y + + SAR +FD P+ + WN++I ++
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 183 GLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERT--D 240
+ +F + R PD T L D + GL+ C++ D
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTK-GLR---CIHGIAIVSGLGFD 140
Query: 241 ILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMRE 300
+ +++V Y K G + A K+F ++ + +++ W +I+GY G ++ + F M+
Sbjct: 141 QICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQH 200
Query: 301 AGVRPNYVTFVGVLSACV 318
G +PN T V + S +
Sbjct: 201 RGHQPNCYTMVALTSGLI 218
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 192/387 (49%), Gaps = 41/387 (10%)
Query: 101 PDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMV 160
P+ T + A ++ G+Q+H L +K Q T I++Y K + SA +V
Sbjct: 229 PNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIV 288
Query: 161 FDENPDPK-LGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVT------------- 206
F E D + L SWN+VI G+ G A+ +F + G PD T
Sbjct: 289 FTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGK 348
Query: 207 ----------------------MVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMW 244
+ SL SAC + L+ G ++H V A AAER DI +
Sbjct: 349 VIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKA-AAER-DIFVL 406
Query: 245 NSLVDMYGKCGRMDLAYKVFATMDER--NVSSWTSLIVGYAMHGHVNEALECFWCMREAG 302
SL+DMY KCG A ++F + + + W +I GY HG A+E F +RE
Sbjct: 407 TSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEK 466
Query: 303 VRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEA 362
V P+ TF VLSAC H G V++G F +M+ YG P +H GCM+DLLGR+G L EA
Sbjct: 467 VEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREA 526
Query: 363 MKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANK 422
+++++M +S+ L+G+C + + +GE A L LEP N +V+LS+IYA
Sbjct: 527 KEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAAL 585
Query: 423 GMWKEVERIRSSMKEGRLAKVPAYSLT 449
W++VE IR + + +L K+P SL+
Sbjct: 586 ERWEDVESIRQVIDQKQLVKLPGLSLS 612
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 120/228 (52%), Gaps = 6/228 (2%)
Query: 101 PDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMV 160
P+++T P +LK+ + + G+ +H+ VK G + + T +++Y K + T A V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 161 FDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDL 220
DE P+ + S NA + GL + G RDA R+F + R G + VT+ S+ C GD+
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDI 145
Query: 221 QLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIV 280
+ G+QLH K+ ++ + SLV MY +CG LA ++F + ++V ++ + I
Sbjct: 146 EGGMQLHCLAM--KSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFIS 203
Query: 281 GYAMHGHVNEALECFWCMRE-AGVRPNYVTFVGVLSACVHGGKVQEGR 327
G +G +N F MR+ + PN VTFV ++AC +Q GR
Sbjct: 204 GLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGR 251
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 126/237 (53%), Gaps = 8/237 (3%)
Query: 119 IELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGG 178
IE G Q+H L +K G + Y T +++Y + GE+ A +F++ P + ++NA I G
Sbjct: 145 IEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISG 204
Query: 179 LSQGGLARDAIRVFVNMRRHGFA-PDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAE 237
L + G+ VF MR+ P+ VT V+ +AC S+ +LQ G QLH V K
Sbjct: 205 LMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVM--KKEF 262
Query: 238 RTDILMWNSLVDMYGKCGRMDLAYKVFATM-DERNVSSWTSLIVGYAMHGHVNEALECFW 296
+ + ++ +L+DMY KC AY VF + D RN+ SW S+I G ++G A+E F
Sbjct: 263 QFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFE 322
Query: 297 CMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLL 353
+ G++P+ T+ ++S GKV E +F+ M +V + P L+ C+ LL
Sbjct: 323 KLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVV-MVPSLK---CLTSLL 375
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 3/205 (1%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQ 124
P WN++I +++L A + ML ++P L +L A + ++ GK+
Sbjct: 330 KPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKE 389
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDE-NPDPKLGS-WNAVIGGLSQG 182
+H +K + + + T I++Y K G + AR +FD P PK WN +I G +
Sbjct: 390 IHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKH 449
Query: 183 GLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDIL 242
G AI +F +R P T ++ SAC G+++ G Q+ + + +
Sbjct: 450 GECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFR-LMQEEYGYKPSTE 508
Query: 243 MWNSLVDMYGKCGRMDLAYKVFATM 267
++D+ G+ GR+ A +V M
Sbjct: 509 HIGCMIDLLGRSGRLREAKEVIDQM 533
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 79/197 (40%), Gaps = 14/197 (7%)
Query: 176 IGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKA 235
+ L GG + D I +P+ T L +C +GD+ G LH V K
Sbjct: 11 VSNLVTGGTSLDVIL--------SHSPNKFTFPPLLKSCAKLGDVVQGRILHAQV--VKT 60
Query: 236 AERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECF 295
D+ +LV MY K ++ A KV M ER ++S + + G +G +A F
Sbjct: 61 GFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMF 120
Query: 296 WCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGR 355
R +G N VT VL C G + EG + G + +V + R
Sbjct: 121 GDARVSGSGMNSVTVASVLGGC---GDI-EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSR 176
Query: 356 AGLLDEAMKMVEEMPMK 372
G A +M E++P K
Sbjct: 177 CGEWVLAARMFEKVPHK 193
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 127/442 (28%), Positives = 206/442 (46%), Gaps = 41/442 (9%)
Query: 38 TQLCNCTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLR- 96
T C +I +V+ + S +WN++I Y++ + + +++ ML
Sbjct: 175 TYYTKCDNIESARKVFDEM-------SERDVVSWNSMISGYSQSGSFEDCKKMYKAMLAC 227
Query: 97 AGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTS 156
+ P+ T+ V +A QS + G +VH ++ +Q + I Y K G
Sbjct: 228 SDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDY 287
Query: 157 ARMVFDENPDPK-------------------------------LGSWNAVIGGLSQGGLA 185
AR +FDE + L +WNA+I GL Q
Sbjct: 288 ARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHH 347
Query: 186 RDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWN 245
+ I F M R G P+ VT+ SL + +L+ G ++H + + +I +
Sbjct: 348 EEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHA--FAIRNGADNNIYVTT 405
Query: 246 SLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRP 305
S++D Y K G + A +VF +R++ +WT++I YA+HG + A F M+ G +P
Sbjct: 406 SIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKP 465
Query: 306 NYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKM 365
+ VT VLSA H G + FD M Y I P ++HY CMV +L RAG L +AM+
Sbjct: 466 DDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEF 525
Query: 366 VEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMW 425
+ +MP+ P + VWG L+ G++E+ + L +EP N G Y +++N+Y G W
Sbjct: 526 ISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRW 585
Query: 426 KEVERIRSSMKEGRLAKVPAYS 447
+E E +R+ MK L K+P S
Sbjct: 586 EEAEMVRNKMKRIGLKKIPGTS 607
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 181/417 (43%), Gaps = 62/417 (14%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRA------GVLPDRYTLPIVLKAV--CQSFAI- 119
F++N ++ YT E +A L + + + PD ++ VLKA+ C F +
Sbjct: 89 FSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLG 148
Query: 120 ELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGL 179
L +QVH ++ G ++ + G I Y K SAR VFDE + + SWN++I G
Sbjct: 149 SLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGY 208
Query: 180 SQGGLARDAIRVFVNMRR-HGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAER 238
SQ G D +++ M F P+GVT++S+ ACG DL GL++H + +
Sbjct: 209 SQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHI--Q 266
Query: 239 TDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCM 298
D+ + N+++ Y KCG +D A +F M E++ ++ ++I GY HG V EA+ F M
Sbjct: 267 MDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEM 326
Query: 299 REAGV-------------------------------RPNYVTFVGVLSACVHGGKVQEGR 327
G+ RPN VT +L + + ++ G+
Sbjct: 327 ESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGK 386
Query: 328 CYFDMM------KNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIV-WGC 380
N+Y T + +Y + LLG + D K S++ W
Sbjct: 387 EIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNC---------KDRSLIAWTA 437
Query: 381 LMGACETYGNVEMGEYVAKHLQAL--EPWNDGAYVVLSNIYANKGMWKEVERIRSSM 435
++ A +G+ + + +Q L +P +D + + +A+ G + I SM
Sbjct: 438 IITAYAVHGDSDSACSLFDQMQCLGTKP-DDVTLTAVLSAFAHSGDSDMAQHIFDSM 493
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 132/298 (44%), Gaps = 18/298 (6%)
Query: 124 QVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGG 183
Q+H+ V ++ + + + I+ Y + F A VFDE S+NA++ +
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 184 LARDAIRVFVN------MRRHGFAPDGVTMVSLTSACGSVGDLQLG---LQLHTCVYHAK 234
+ DA +F++ PD +++ + A D LG Q+H V +
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVI--R 160
Query: 235 AAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALEC 294
+D+ + N ++ Y KC ++ A KVF M ER+V SW S+I GY+ G + +
Sbjct: 161 GGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKM 220
Query: 295 FWCMRE-AGVRPNYVTFVGVLSACVHGGKVQEG-RCYFDMMKNVYGITPRLQHYGCMVDL 352
+ M + +PN VT + V AC + G + M++N I L ++
Sbjct: 221 YKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIEN--HIQMDLSLCNAVIGF 278
Query: 353 LGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQA--LEPWN 408
+ G LD A + +EM K +S+ +G ++ +G V+ + +++ L WN
Sbjct: 279 YAKCGSLDYARALFDEMSEK-DSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWN 335
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 198/411 (48%), Gaps = 36/411 (8%)
Query: 72 NNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVK 131
N + + Y +P+ AL + +LR G +PD YT ++ + ++ ++ GK H +K
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 132 IGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA--- 188
G + +++Y G A+ +F E P + SWN++I G+ + G A
Sbjct: 147 HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKL 206
Query: 189 ----------------------------IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDL 220
I +F M R GF + T+V L +ACG L
Sbjct: 207 FDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 221 QLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIV 280
+ G +H + + + +++ +L+DMYGKC + LA ++F ++ RN +W +I+
Sbjct: 267 KEGRSVHASLI--RTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMIL 324
Query: 281 GYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGIT 340
+ +HG LE F M +RP+ VTFVGVL C G V +G+ Y+ +M + + I
Sbjct: 325 AHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIK 384
Query: 341 PRLQHYGCMVDLLGRAGLLDEAMKMVEEMP---MKPNSIVWGCLMGACETYGNVEMGEYV 397
P H CM +L AG +EA + ++ +P + P S W L+ + GN +GE +
Sbjct: 385 PNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESI 444
Query: 398 AKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYSL 448
AK L +P N Y +L NIY+ G W++V R+R +KE ++ ++P L
Sbjct: 445 AKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGL 495
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 108/256 (42%), Gaps = 31/256 (12%)
Query: 168 KLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTS--------------- 212
KL N V + A+ + ++ R GF PD T VSL S
Sbjct: 82 KLYCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCH 141
Query: 213 ------ACGSVGDLQLGL-QLHTCVYHAKAAE-------RTDILMWNSLVDMYGKCGRMD 258
C V +Q L ++TC A+ + DI+ WNS++ + G +
Sbjct: 142 GQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVL 201
Query: 259 LAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACV 318
A+K+F M ++N+ SW +I Y + ++ F M AG + N T V +L+AC
Sbjct: 202 AAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACG 261
Query: 319 HGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVW 378
+++EGR + + + + ++D+ G+ + A ++ + + ++ N + W
Sbjct: 262 RSARLKEGRSVHASLIRTF-LNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIR-NKVTW 319
Query: 379 GCLMGACETYGNVEMG 394
++ A +G E G
Sbjct: 320 NVMILAHCLHGRPEGG 335
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 93/222 (41%), Gaps = 5/222 (2%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WN +I Y P ++ L M+RAG + TL ++L A +S ++ G+ VH+
Sbjct: 217 SWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASL 276
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
++ L ++ +T I++Y K E AR +FD +WN +I G +
Sbjct: 277 IRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGL 336
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
+F M PD VT V + C G + G ++ + + W + +
Sbjct: 337 ELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQW-CMAN 395
Query: 250 MYGKCGRMDLAYKVFATMDERNV----SSWTSLIVGYAMHGH 287
+Y G + A + + + +V + W +L+ G+
Sbjct: 396 LYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGN 437
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 109/311 (35%), Positives = 172/311 (55%), Gaps = 2/311 (0%)
Query: 118 AIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIG 177
A+ L K + LG+K + T +GF ++ + ++ + P + SW ++I
Sbjct: 202 ALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIIS 261
Query: 178 GLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAE 237
GL A F M HG P+ T+++L AC ++ ++ G ++H Y
Sbjct: 262 GLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHG--YSVVTGL 319
Query: 238 RTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWC 297
+ ++L+DMYGKCG + A +F ++ ++ S+I YA HG ++A+E F
Sbjct: 320 EDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQ 379
Query: 298 MREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAG 357
M G + +++TF +L+AC H G G+ F +M+N Y I PRL+HY CMVDLLGRAG
Sbjct: 380 MEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAG 439
Query: 358 LLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSN 417
L EA +M++ M M+P+ VWG L+ AC +GN+E+ AKHL LEP N G ++L++
Sbjct: 440 KLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTS 499
Query: 418 IYANKGMWKEV 428
+YAN G W+ V
Sbjct: 500 LYANAGSWESV 510
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 132/279 (47%), Gaps = 6/279 (2%)
Query: 122 GKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQ 181
G+ +H+ V G+ + Y + G+ AR VFDE P + +IG ++
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 182 GGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI 241
G ++++ F M + G D + SL A ++ D + G +H V K + +D
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVL--KFSYESDA 152
Query: 242 LMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREA 301
+ +SL+DMY K G + A KVF+ + E+++ + ++I GYA + +EAL M+
Sbjct: 153 FIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLL 212
Query: 302 GVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDE 361
G++P+ +T+ ++S H ++ ++M + G P + + ++ L ++
Sbjct: 213 GIKPDVITWNALISGFSHMRNEEKVSEILELM-CLDGYKPDVVSWTSIISGLVHNFQNEK 271
Query: 362 AMKMVEEM---PMKPNSIVWGCLMGACETYGNVEMGEYV 397
A ++M + PNS L+ AC T ++ G+ +
Sbjct: 272 AFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEI 310
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 129/293 (44%), Gaps = 46/293 (15%)
Query: 94 MLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGE 153
M + G+ D + +P +LKA E GK +H L +K +++ + + I++Y K GE
Sbjct: 108 MYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGE 167
Query: 154 FTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSA 213
+AR VF + + L +NA+I G + A +A+ + +M+ G PD +T +L S
Sbjct: 168 VGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISG 227
Query: 214 CGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVS 273
H + E+ ++ +D Y + +V
Sbjct: 228 FS----------------HMRNEEKVSEILELMCLDGY-----------------KPDVV 254
Query: 274 SWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMM 333
SWTS+I G + +A + F M G+ PN T + +L AC ++ G+
Sbjct: 255 SWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEI---- 310
Query: 334 KNVYGITPRLQHYG----CMVDLLGRAGLLDEAMKMVEEMPMKP----NSIVW 378
+ Y + L+ +G ++D+ G+ G + EAM + + P K NS+++
Sbjct: 311 -HGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIF 362
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 108/230 (46%), Gaps = 6/230 (2%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFA-IELGK 123
P +W +II A ML G+ P+ T+ +L A C + A ++ GK
Sbjct: 250 KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPA-CTTLAYMKHGK 308
Query: 124 QVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGG 183
++H V GL+ + + + +++Y K G + A ++F + P ++N++I + G
Sbjct: 309 EIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHG 368
Query: 184 LARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHA-KAAERTDIL 242
LA A+ +F M G D +T ++ +AC G LG L + + + R +
Sbjct: 369 LADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLE-- 426
Query: 243 MWNSLVDMYGKCGRMDLAYKVFATMD-ERNVSSWTSLIVGYAMHGHVNEA 291
+ +VD+ G+ G++ AY++ M E ++ W +L+ HG++ A
Sbjct: 427 HYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELA 476
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 113/359 (31%), Positives = 197/359 (54%), Gaps = 8/359 (2%)
Query: 89 RLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCET--GFIN 146
+H ++AG+L D P + A+ ++A + G ++ + +GL + ++
Sbjct: 453 EVHGYSVKAGLLHDEEE-PKLGNALLDAYA-KCGNVEYAHKIFLGLSERRTLVSYNSLLS 510
Query: 147 LYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVT 206
Y SG A+M+F E L +W+ ++ ++ +AI VF ++ G P+ VT
Sbjct: 511 GYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVT 570
Query: 207 MVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFAT 266
+++L C + L L Q H + DI + +L+D+Y KCG + AY VF +
Sbjct: 571 IMNLLPVCAQLASLHLVRQCHGYIIRGGLG---DIRLKGTLLDVYAKCGSLKHAYSVFQS 627
Query: 267 MDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEG 326
R++ +T+++ GYA+HG EAL + M E+ ++P++V +L+AC H G +Q+G
Sbjct: 628 DARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDG 687
Query: 327 RCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACE 386
+D ++ V+G+ P ++ Y C VDL+ R G LD+A V +MP++PN+ +WG L+ AC
Sbjct: 688 LQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACT 747
Query: 387 TYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPA 445
TY +++G VA HL E + G +V++SN+YA W+ V +R+ MK+ + K PA
Sbjct: 748 TYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKK-PA 805
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 121/266 (45%), Gaps = 8/266 (3%)
Query: 68 PFNWNNIIRCYTRLEAPRNALRLHVLMLRAG-VLPDRYTLPIVLKAVCQSFAIELGKQVH 126
P WN I+ + R +R M A P T IVL + GK +H
Sbjct: 87 PVVWN-IVLTGLSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMH 145
Query: 127 SLGVKIGLQTNEYCETGFINLYCKSGE-FTSARMVFDENPDPKLGSWNAVIGGLSQGGLA 185
S +K GL+ + +++Y K G F A FD D + SWNA+I G S+ +
Sbjct: 146 SYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMM 205
Query: 186 RDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGD---LQLGLQLHTCVYHAKAAERTDIL 242
DA R F M + P+ T+ ++ C S+ + G Q+H+ V ++ +T +
Sbjct: 206 ADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQ-RSWLQTHVF 264
Query: 243 MWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAG 302
+ NSLV Y + GR++ A +F M +++ SW +I GYA + +A + F + G
Sbjct: 265 VCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKG 324
Query: 303 -VRPNYVTFVGVLSACVHGGKVQEGR 327
V P+ VT + +L C + G+
Sbjct: 325 DVSPDSVTIISILPVCAQLTDLASGK 350
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 160/378 (42%), Gaps = 42/378 (11%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQS----FAIELGKQV 125
+WN II ++ +A R LML+ P+ T+ VL VC S A G+Q+
Sbjct: 191 SWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLP-VCASMDKNIACRSGRQI 249
Query: 126 HSLGVKIG-LQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGL 184
HS V+ LQT+ + ++ Y + G A +F L SWN VI G +
Sbjct: 250 HSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCE 309
Query: 185 ARDAIRVFVNMRRHG-FAPDGVTMVSLTSACGSVGDLQLGLQLHTCVY-HAKAAERTDIL 242
A ++F N+ G +PD VT++S+ C + DL G ++H+ + H+ E T +
Sbjct: 310 WFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSV- 368
Query: 243 MWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAG 302
N+L+ Y + G AY F+ M +++ SW +++ +A + L +
Sbjct: 369 -GNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEA 427
Query: 303 VRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEA 362
+ + VT + +L C+ NV GI + +G V +AGLL +
Sbjct: 428 ITLDSVTILSLLKFCI----------------NVQGIGKVKEVHGYSV----KAGLLHD- 466
Query: 363 MKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANK 422
EE P N+ L+ A GNVE + L E +Y L + Y N
Sbjct: 467 ----EEEPKLGNA-----LLDAYAKCGNVEYAHKIFLGLS--ERRTLVSYNSLLSGYVNS 515
Query: 423 GMWKEVERIRSSMKEGRL 440
G + + + + M L
Sbjct: 516 GSHDDAQMLFTEMSTTDL 533
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 120/297 (40%), Gaps = 15/297 (5%)
Query: 95 LRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEF 154
L +G D V+KA + G+ +H K+G +N+Y K
Sbjct: 13 LLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRM 72
Query: 155 TSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFA----PDGVTMVSL 210
+ +F + WN V+ GLS R+ +R F M FA P VT +
Sbjct: 73 DDCQKMFRQMDSLDPVVWNIVLTGLSV-SCGRETMRFFKAMH---FADEPKPSSVTFAIV 128
Query: 211 TSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRM-DLAYKVFATMDE 269
C +GD G +H+ Y KA D L+ N+LV MY K G + AY F + +
Sbjct: 129 LPLCVRLGDSYNGKSMHS--YIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIAD 186
Query: 270 RNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGK---VQEG 326
++V SW ++I G++ + + +A F M + PNY T VL C K + G
Sbjct: 187 KDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSG 246
Query: 327 RCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMG 383
R + + + +V R G ++EA + M K + + W ++
Sbjct: 247 RQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSK-DLVSWNVVIA 302
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 97/211 (45%), Gaps = 3/211 (1%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
W+ ++R Y P A+ + + G+ P+ T+ +L Q ++ L +Q H
Sbjct: 535 TWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYI 594
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
++ GL T +++Y K G A VF + L + A++ G + G ++A+
Sbjct: 595 IRGGLGDIRLKGT-LLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEAL 653
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
++ +M PD V + ++ +AC G +Q GLQ++ + + T + + VD
Sbjct: 654 MIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPT-MEQYACAVD 712
Query: 250 MYGKCGRMDLAYKVFATMD-ERNVSSWTSLI 279
+ + GR+D AY M E N + W +L+
Sbjct: 713 LIARGGRLDDAYSFVTQMPVEPNANIWGTLL 743
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 67/145 (46%), Gaps = 12/145 (8%)
Query: 189 IRVFVNMRR--HGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVY---HAKAAERTDILM 243
+R FV R GF D + + AC SV DL G LH CV+ H +E +
Sbjct: 4 LRQFVQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVS---- 59
Query: 244 WNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAG- 302
S+++MY KC RMD K+F MD + W ++ G ++ E + F M A
Sbjct: 60 -KSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCG-RETMRFFKAMHFADE 117
Query: 303 VRPNYVTFVGVLSACVHGGKVQEGR 327
+P+ VTF VL CV G G+
Sbjct: 118 PKPSSVTFAIVLPLCVRLGDSYNGK 142
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 130/395 (32%), Positives = 196/395 (49%), Gaps = 9/395 (2%)
Query: 66 PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAG-VLPDRYTLPIVLKAVCQSFAIELGKQ 124
P +W ++I Y + P+NAL + M V P+ YT V KA +GK
Sbjct: 93 PNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKN 152
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDE--NPDPKLGSWNAVIGGLSQG 182
+H+ GL+ N + +++Y K + +AR VFD + SW ++I +Q
Sbjct: 153 IHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQN 212
Query: 183 GLARDAIRVF--VNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTD 240
+AI +F N + + S+ SAC S+G LQ G H V + ++
Sbjct: 213 ARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLV--TRGGYESN 270
Query: 241 ILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMRE 300
++ SL+DMY KCG + A K+F + +V S+TS+I+ A HG A++ F M
Sbjct: 271 TVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVA 330
Query: 301 AGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLD 360
+ PNYVT +GVL AC H G V EG Y +M YG+ P +HY C+VD+LGR G +D
Sbjct: 331 GRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVD 390
Query: 361 EAMKMVE--EMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNI 418
EA ++ + E+ + +++WG L+ A +G VE+ +K L AY+ LSN
Sbjct: 391 EAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNA 450
Query: 419 YANKGMWKEVERIRSSMKEGRLAKVPAYSLTTNSD 453
YA G W++ E +R MK K A S N D
Sbjct: 451 YAVSGGWEDSESLRLEMKRSGNVKERACSWIENKD 485
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 146/313 (46%), Gaps = 41/313 (13%)
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGL 184
+H+L +K+G ++ + + Y K E +AR +FDE +P + SW +VI G + G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 185 ARDAIRVFVNMRR-HGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILM 243
++A+ +F M P+ T S+ AC ++ + ++G +H + + R +I++
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARL--EISGLRRNIVV 168
Query: 244 WNSLVDMYGKCGRMDLAYKVFATMD--ERNVSSWTSLIVGYAMHGHVNEALECFWCMREA 301
+SLVDMYGKC ++ A +VF +M RNV SWTS+I YA + +EA+E F A
Sbjct: 169 SSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAA 228
Query: 302 --GVRPNYVTFVGVLSACVHGGKVQEGRCYFDMM------KNVYGITPRLQHYG------ 347
R N V+SAC G++Q G+ ++ N T L Y
Sbjct: 229 LTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLS 288
Query: 348 ------------------CMVDLLGRAGLLDEAMKMVEEM---PMKPNSIVWGCLMGACE 386
M+ + GL + A+K+ +EM + PN + ++ AC
Sbjct: 289 CAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACS 348
Query: 387 TYGNVEMG-EYVA 398
G V G EY++
Sbjct: 349 HSGLVNEGLEYLS 361
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 207/417 (49%), Gaps = 39/417 (9%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIV-------------------- 109
+WN II CYT E A +L M +GV T +
Sbjct: 252 SWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGM 311
Query: 110 ---------------LKAVCQSFAIELGKQVHSLGVKIGLQTNEY--CETGFINLYCKSG 152
LKA A++ GK H L ++ +++ I +Y +
Sbjct: 312 RNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCS 371
Query: 153 EFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTS 212
+ A +VF + L +WN++I G + + + + M GF P+ +T+ S+
Sbjct: 372 DLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILP 431
Query: 213 ACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNV 272
VG+LQ G + H C + + + +++WNSLVDMY K G + A +VF +M +R+
Sbjct: 432 LFARVGNLQHGKEFH-CYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDK 490
Query: 273 SSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDM 332
++TSLI GY G AL F M +G++P++VT V VLSAC H V+EG F
Sbjct: 491 VTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTK 550
Query: 333 MKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVE 392
M++V+GI RL+HY CMVDL RAG LD+A + +P +P+S + L+ AC +GN
Sbjct: 551 MEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTN 610
Query: 393 MGEYVA-KHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYSL 448
+GE+ A K L +P + G Y++L+++YA G W ++ +++ + + + K ++L
Sbjct: 611 IGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFAL 667
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 149/363 (41%), Gaps = 39/363 (10%)
Query: 68 PFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHS 127
P WN +I Y R + + ++ ++ M+ G+ D +T P V+KA G+ VH
Sbjct: 149 PLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG 208
Query: 128 LGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDE----------------NPDPKLG- 170
+ N Y I++Y + G+ AR +FD + KLG
Sbjct: 209 SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGE 268
Query: 171 ------------------SWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTS 212
+WN + GG + G A+ V MR V M++
Sbjct: 269 AFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLK 328
Query: 213 ACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNV 272
AC +G L+ G H V + + + NSL+ MY +C + A+ VF ++ ++
Sbjct: 329 ACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSL 388
Query: 273 SSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDM 332
S+W S+I G+A + E M +G PN++T +L G +Q G+ +
Sbjct: 389 STWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCY 448
Query: 333 MKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVE 392
+ L + +VD+ ++G + A ++ + M K + + + L+ + YG +
Sbjct: 449 ILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM-RKRDKVTYTSLI---DGYGRLG 504
Query: 393 MGE 395
GE
Sbjct: 505 KGE 507
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 93/200 (46%), Gaps = 2/200 (1%)
Query: 122 GKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQ 181
G+Q+H+ + GL+ + + Y A+ + + + WN +IG +
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIR 161
Query: 182 GGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI 241
++++ V+ M G D T S+ AC ++ D G +H + ++ R ++
Sbjct: 162 NKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSI--EVSSHRCNL 219
Query: 242 LMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREA 301
+ N+L+ MY + G++D+A ++F M ER+ SW ++I Y + EA + M +
Sbjct: 220 YVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLS 279
Query: 302 GVRPNYVTFVGVLSACVHGG 321
GV + VT+ + C+ G
Sbjct: 280 GVEASIVTWNTIAGGCLEAG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 207/417 (49%), Gaps = 39/417 (9%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIV-------------------- 109
+WN II CYT E A +L M +GV T +
Sbjct: 252 SWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGM 311
Query: 110 ---------------LKAVCQSFAIELGKQVHSLGVKIGLQTNEY--CETGFINLYCKSG 152
LKA A++ GK H L ++ +++ I +Y +
Sbjct: 312 RNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCS 371
Query: 153 EFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTS 212
+ A +VF + L +WN++I G + + + + M GF P+ +T+ S+
Sbjct: 372 DLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILP 431
Query: 213 ACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNV 272
VG+LQ G + H C + + + +++WNSLVDMY K G + A +VF +M +R+
Sbjct: 432 LFARVGNLQHGKEFH-CYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDK 490
Query: 273 SSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDM 332
++TSLI GY G AL F M +G++P++VT V VLSAC H V+EG F
Sbjct: 491 VTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTK 550
Query: 333 MKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVE 392
M++V+GI RL+HY CMVDL RAG LD+A + +P +P+S + L+ AC +GN
Sbjct: 551 MEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTN 610
Query: 393 MGEYVA-KHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYSL 448
+GE+ A K L +P + G Y++L+++YA G W ++ +++ + + + K ++L
Sbjct: 611 IGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFAL 667
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 149/363 (41%), Gaps = 39/363 (10%)
Query: 68 PFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHS 127
P WN +I Y R + + ++ ++ M+ G+ D +T P V+KA G+ VH
Sbjct: 149 PLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG 208
Query: 128 LGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDE----------------NPDPKLG- 170
+ N Y I++Y + G+ AR +FD + KLG
Sbjct: 209 SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGE 268
Query: 171 ------------------SWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTS 212
+WN + GG + G A+ V MR V M++
Sbjct: 269 AFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLK 328
Query: 213 ACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNV 272
AC +G L+ G H V + + + NSL+ MY +C + A+ VF ++ ++
Sbjct: 329 ACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSL 388
Query: 273 SSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDM 332
S+W S+I G+A + E M +G PN++T +L G +Q G+ +
Sbjct: 389 STWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCY 448
Query: 333 MKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVE 392
+ L + +VD+ ++G + A ++ + M K + + + L+ + YG +
Sbjct: 449 ILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM-RKRDKVTYTSLI---DGYGRLG 504
Query: 393 MGE 395
GE
Sbjct: 505 KGE 507
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 93/200 (46%), Gaps = 2/200 (1%)
Query: 122 GKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQ 181
G+Q+H+ + GL+ + + Y A+ + + + WN +IG +
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIR 161
Query: 182 GGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI 241
++++ V+ M G D T S+ AC ++ D G +H + ++ R ++
Sbjct: 162 NKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSI--EVSSHRCNL 219
Query: 242 LMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREA 301
+ N+L+ MY + G++D+A ++F M ER+ SW ++I Y + EA + M +
Sbjct: 220 YVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLS 279
Query: 302 GVRPNYVTFVGVLSACVHGG 321
GV + VT+ + C+ G
Sbjct: 280 GVEASIVTWNTIAGGCLEAG 299
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/374 (33%), Positives = 192/374 (51%), Gaps = 4/374 (1%)
Query: 74 IIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIG 133
+I Y++ A++ ML V P+ YT VL + I GK +H L VK G
Sbjct: 238 LIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSG 297
Query: 134 LQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFV 193
++ +T + +Y + + VF P SW ++I GL Q G A+ F
Sbjct: 298 FESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFR 357
Query: 194 NMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGK 253
M R P+ T+ S C ++ + G Q+H V K D + L+D+YGK
Sbjct: 358 KMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIV--TKYGFDRDKYAGSGLIDLYGK 415
Query: 254 CGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGV 313
CG D+A VF T+ E +V S ++I YA +G EAL+ F M G++PN VT + V
Sbjct: 416 CGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSV 475
Query: 314 LSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKP 373
L AC + V+EG FD + I HY CMVDLLGRAG L+EA + E+ + P
Sbjct: 476 LLACNNSRLVEEGCELFDSFRK-DKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEV-INP 533
Query: 374 NSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRS 433
+ ++W L+ AC+ + VEM E + + + +EP ++G +++SN+YA+ G W V ++S
Sbjct: 534 DLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKS 593
Query: 434 SMKEGRLAKVPAYS 447
MK+ +L K PA S
Sbjct: 594 KMKDMKLKKNPAMS 607
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 170/366 (46%), Gaps = 32/366 (8%)
Query: 5 FFQLGRRCYSVSQRSIT-----QTLLLDSANNPVTLIATQLCN----CTHIHQLNQVYAH 55
F QL R+C + +RSI+ Q +L S P + ++L + C I QV+
Sbjct: 68 FSQLLRQC--IDERSISGIKTIQAHMLKSGF-PAEISGSKLVDASLKCGDIDYARQVFDG 124
Query: 56 ILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQ 115
+ H + WN++I + + A+ ++ LM+ VLPD YTL V KA
Sbjct: 125 MSERHIV-------TWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSD 177
Query: 116 SFAIELGKQVHSLGVKIGLQ-TNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNA 174
+ ++ H L V +GL+ +N + + +++Y K G+ A++V D + + A
Sbjct: 178 LSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITA 237
Query: 175 VIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAK 234
+I G SQ G +A++ F +M P+ T S+ +CG++ D+ G +H + K
Sbjct: 238 LIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLM--VK 295
Query: 235 AAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALEC 294
+ + + SL+ MY +C +D + +VF ++ N SWTSLI G +G AL
Sbjct: 296 SGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIE 355
Query: 295 FWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLG 354
F M ++PN T L C + +EGR ++GI + YG D
Sbjct: 356 FRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGR-------QIHGIVTK---YGFDRDKYA 405
Query: 355 RAGLLD 360
+GL+D
Sbjct: 406 GSGLID 411
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 144/318 (45%), Gaps = 14/318 (4%)
Query: 83 APRNAL--RLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYC 140
+P +++ + +L + L + +L+ +I K + + +K G E
Sbjct: 43 SPESSINNQFRLLCITCDTLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPA-EIS 101
Query: 141 ETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGF 200
+ ++ K G+ AR VFD + + +WN++I L + +++A+ ++ M +
Sbjct: 102 GSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNV 161
Query: 201 APDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAA----ERTDILMWNSLVDMYGKCGR 256
PD T+ S+ A L L+ H A E +++ + ++LVDMY K G+
Sbjct: 162 LPDEYTLSSVFKAFS-----DLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGK 216
Query: 257 MDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSA 316
A V ++E++V T+LIVGY+ G EA++ F M V+PN T+ VL +
Sbjct: 217 TREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLIS 276
Query: 317 CVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSI 376
C + + G+ +M G L ++ + R L+D+++++ + + PN +
Sbjct: 277 CGNLKDIGNGKLIHGLMVK-SGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEY-PNQV 334
Query: 377 VWGCLMGACETYGNVEMG 394
W L+ G EM
Sbjct: 335 SWTSLISGLVQNGREEMA 352
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 2/226 (0%)
Query: 66 PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQV 125
P +W ++I + AL M+R + P+ +TL L+ E G+Q+
Sbjct: 331 PNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQI 390
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLA 185
H + K G ++Y +G I+LY K G AR+VFD + + S N +I +Q G
Sbjct: 391 HGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFG 450
Query: 186 RDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWN 245
R+A+ +F M G P+ VT++S+ AC + ++ G +L K D +
Sbjct: 451 REALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTND--HYA 508
Query: 246 SLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEA 291
+VD+ G+ GR++ A + + ++ W +L+ +H V A
Sbjct: 509 CMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVEMA 554
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/413 (30%), Positives = 214/413 (51%), Gaps = 20/413 (4%)
Query: 41 CNCTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGV- 99
C+C + + V+ I NP +WN+II + A+ ++ +LR
Sbjct: 346 CSCGDMREAFYVFGRI-------HNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTP 398
Query: 100 LPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARM 159
PD YT + A + GK +H K+G + + + T +++Y K+ E SA+
Sbjct: 399 RPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQK 458
Query: 160 VFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGD 219
VFD + + W +I G S+ G + A++ F+ M R DG ++ S+ AC +
Sbjct: 459 VFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAM 518
Query: 220 LQLGLQLHTCVYHAKAAERT--DILMW--NSLVDMYGKCGRMDLAYKVFATMDERNVSSW 275
L+ G H C+ A RT D +M +LVDMYGK G+ + A +F+ ++ W
Sbjct: 519 LRQGEVFH-CL-----AIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCW 572
Query: 276 TSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKN 335
S++ Y+ HG V +AL F + E G P+ VT++ +L+AC H G +G+ ++ MK
Sbjct: 573 NSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKE 632
Query: 336 VYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSI-VWGCLMGACETYGNVEMG 394
GI +HY CMV+L+ +AGL+DEA++++E+ P N +W L+ AC N+++G
Sbjct: 633 -QGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIG 691
Query: 395 EYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
Y A+ + L+P + +++LSN+YA G W++V +R ++ +K P S
Sbjct: 692 LYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLS 744
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 143/323 (44%), Gaps = 5/323 (1%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN +I + + + L ML +GV P ++T IVL + + LGK +H+ +
Sbjct: 268 WNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARII 327
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
+ + +++YC G+ A VF +P L SWN++I G S+ G A+
Sbjct: 328 VSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAML 387
Query: 191 VFVNMRRHGFA-PDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
++ + R PD T + SA G LH V K + + +L+
Sbjct: 388 MYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQV--TKLGYERSVFVGTTLLS 445
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
MY K + A KVF M ER+V WT +IVG++ G+ A++ F M R + +
Sbjct: 446 MYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFS 505
Query: 310 FVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
V+ AC +++G F + G + G +VD+ G+ G + A + + +
Sbjct: 506 LSSVIGACSDMAMLRQGEV-FHCLAIRTGFDCVMSVCGALVDMYGKNGKYETA-ETIFSL 563
Query: 370 PMKPNSIVWGCLMGACETYGNVE 392
P+ W ++GA +G VE
Sbjct: 564 ASNPDLKCWNSMLGAYSQHGMVE 586
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 140/335 (41%), Gaps = 35/335 (10%)
Query: 26 LDSANNPVTLIATQLCNCTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTR---LE 82
L+ + V + + + T + + Q++A +L + +P+ NN+I Y R LE
Sbjct: 90 LNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLE 149
Query: 83 AP---------RNALRLHVLMLRAGVLPD--RYTLPIV-----------------LKAVC 114
RN + + L PD Y P+ L VC
Sbjct: 150 QARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVC 209
Query: 115 QSFA-IELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWN 173
+ +G ++S +K+G N +T + +Y G+ SAR +FD + +WN
Sbjct: 210 AVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWN 269
Query: 174 AVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHA 233
+I G + D + F NM G P T + + C +G LG +H + +
Sbjct: 270 TMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVS 329
Query: 234 KAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALE 293
+ D+ + N+L+DMY CG M A+ VF + N+ SW S+I G + +G +A+
Sbjct: 330 DSL--ADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAML 387
Query: 294 CF-WCMREAGVRPNYVTFVGVLSACVHGGKVQEGR 327
+ +R + RP+ TF +SA + G+
Sbjct: 388 MYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGK 422
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 152/373 (40%), Gaps = 48/373 (12%)
Query: 61 FLESNPA---PFNWNNIIRCYTR---LEAPRNAL-------------------------R 89
F+E++ A P+ NN+I Y R LE R
Sbjct: 12 FVETDAAAEYPYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSS 71
Query: 90 LHVLMLRAGVLPDRYTLP--------IVLKAVCQSFAI-ELGKQVHSLGVKIGL---QTN 137
LH +++ G + +P + L C S + + +Q+H+L + G +
Sbjct: 72 LHSQIIKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATES 131
Query: 138 EYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQG-GLARDAIRVFVNMR 196
Y I++Y + G AR VFD+ P + S+NA+ S+ A A + +M
Sbjct: 132 PYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMA 191
Query: 197 RHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGR 256
P+ T SL C + D+ +G L++ + K ++++ S++ MY CG
Sbjct: 192 FEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQII--KLGYSDNVVVQTSVLGMYSSCGD 249
Query: 257 MDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSA 316
++ A ++F ++ R+ +W ++IVG + + + L F M +GV P T+ VL+
Sbjct: 250 LESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNG 309
Query: 317 CVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSI 376
C G G+ + V L ++D+ G + EA + + PN +
Sbjct: 310 CSKLGSYSLGKLIHARII-VSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIH-NPNLV 367
Query: 377 VWGCLMGACETYG 389
W ++ C G
Sbjct: 368 SWNSIISGCSENG 380
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/331 (34%), Positives = 174/331 (52%), Gaps = 7/331 (2%)
Query: 102 DRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVF 161
D +T +L A C+ IE GKQ+H++ K+ Q + T +N+Y KS + AR F
Sbjct: 244 DYFTFSSLLSA-CR---IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECF 299
Query: 162 DENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQ 221
+ + SWNA+I G +Q G R+A+R+F M PD +T S+ S+C +
Sbjct: 300 ESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIW 359
Query: 222 LGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVG 281
Q+ V +A+ + NSL+ Y + G + A F ++ E ++ SWTS+I
Sbjct: 360 EIKQVQAMVTKKGSADFLSVA--NSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGA 417
Query: 282 YAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITP 341
A HG E+L+ F M + ++P+ +TF+ VLSAC HGG VQEG F M Y I
Sbjct: 418 LASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEA 476
Query: 342 RLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHL 401
+HY C++DLLGRAG +DEA ++ MP +P++ G C + E ++ AK L
Sbjct: 477 EDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKL 536
Query: 402 QALEPWNDGAYVVLSNIYANKGMWKEVERIR 432
+EP Y +LSN Y ++G W + +R
Sbjct: 537 LEIEPTKPVNYSILSNAYVSEGHWNQAALLR 567
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 150/316 (47%), Gaps = 11/316 (3%)
Query: 94 MLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGE 153
+L V D + +++ S ++ G Q+H L VK GL+++ + T ++ Y K G
Sbjct: 133 ILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGL 192
Query: 154 FTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNM--RRHGFAPDGVTMVSLT 211
AR VF+ D L WNA++ G+ +A + M ++ F D T SL
Sbjct: 193 IVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLL 252
Query: 212 SACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERN 271
SAC ++ G Q+H ++ K + + DI + +L++MY K + A + F +M RN
Sbjct: 253 SAC----RIEQGKQIHAILF--KVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRN 306
Query: 272 VSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFD 331
V SW ++IVG+A +G EA+ F M ++P+ +TF VLS+C + E +
Sbjct: 307 VVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIK-QVQ 365
Query: 332 MMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNV 391
M G L ++ R G L EA+ + +P+ + W ++GA ++G
Sbjct: 366 AMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIR-EPDLVSWTSVIGALASHGFA 424
Query: 392 EMG-EYVAKHLQALEP 406
E + LQ L+P
Sbjct: 425 EESLQMFESMLQKLQP 440
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 148/326 (45%), Gaps = 30/326 (9%)
Query: 123 KQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQ- 181
KQ H VK G+ + + + + Y K EF A +FDE P + +WN +I G+ Q
Sbjct: 56 KQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQR 115
Query: 182 -GGLARDAIRVFVNMRRHGFAP---DGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAE 237
G A F + R F D V+ + L C +++ G+QLH + K
Sbjct: 116 DGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLM--VKQGL 173
Query: 238 RTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWC 297
+ SLV YGKCG + A +VF + +R++ W +L+ Y ++G ++EA
Sbjct: 174 ESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKL 233
Query: 298 M--REAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHY------GCM 349
M + R +Y TF +LSAC ++++G K ++ I ++ + +
Sbjct: 234 MGSDKNRFRGDYFTFSSLLSAC----RIEQG-------KQIHAILFKVSYQFDIPVATAL 282
Query: 350 VDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLM--GACETYGNVEMGEYVAKHLQALEPW 407
+++ ++ L +A + E M ++ N + W ++ A G M + L+ L+P
Sbjct: 283 LNMYAKSNHLSDARECFESMVVR-NVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPD 341
Query: 408 NDGAYVVLSNIYANKGMWKEVERIRS 433
VLS+ +W E++++++
Sbjct: 342 ELTFASVLSSCAKFSAIW-EIKQVQA 366
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 95/198 (47%), Gaps = 2/198 (1%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WN +I + + R A+RL ML + PD T VL + + AI KQV ++
Sbjct: 309 SWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMV 368
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
K G I+ Y ++G + A + F +P L SW +VIG L+ G A +++
Sbjct: 369 TKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESL 428
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
++F +M + PD +T + + SAC G +Q GL+ + E D + L+D
Sbjct: 429 QMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAED-EHYTCLID 486
Query: 250 MYGKCGRMDLAYKVFATM 267
+ G+ G +D A V +M
Sbjct: 487 LLGRAGFIDEASDVLNSM 504
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 169/296 (57%), Gaps = 8/296 (2%)
Query: 150 KSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRH-GFAPDGVTMV 208
K GE A+ V D + +WN +IGG + +A++ NM P+ +
Sbjct: 110 KIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFA 169
Query: 209 SLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMD 268
S +AC +GDL +H+ + + + ++ ++LVD+Y KCG + + +VF ++
Sbjct: 170 SSLAACARLGDLHHAKWVHSLMIDSGI--ELNAILSSALVDVYAKCGDIGTSREVFYSVK 227
Query: 269 ERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRC 328
+VS W ++I G+A HG EA+ F M V P+ +TF+G+L+ C H G ++EG+
Sbjct: 228 RNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKE 287
Query: 329 YFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETY 388
YF +M + I P+L+HYG MVDLLGRAG + EA +++E MP++P+ ++W L+ + TY
Sbjct: 288 YFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTY 347
Query: 389 GNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSM-KEG-RLAK 442
N E+GE +Q L G YV+LSNIY++ W+ +++R M KEG R AK
Sbjct: 348 KNPELGEIA---IQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAK 400
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 109/218 (50%), Gaps = 3/218 (1%)
Query: 64 SNPAPFNWNNIIRCYTRLEAPRNALR-LHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELG 122
S+ WN +I Y R AL+ L ++ + P++++ L A + +
Sbjct: 125 SDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHA 184
Query: 123 KQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQG 182
K VHSL + G++ N + +++Y K G+ ++R VF + WNA+I G +
Sbjct: 185 KWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATH 244
Query: 183 GLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDIL 242
GLA +AIRVF M +PD +T + L + C G L+ G + + + + + + +
Sbjct: 245 GLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKE-YFGLMSRRFSIQPKLE 303
Query: 243 MWNSLVDMYGKCGRMDLAYKVFATMD-ERNVSSWTSLI 279
+ ++VD+ G+ GR+ AY++ +M E +V W SL+
Sbjct: 304 HYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/412 (29%), Positives = 204/412 (49%), Gaps = 47/412 (11%)
Query: 68 PFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHS 127
+WN +I Y + AL++ V M G+ D ++ VL + ++++GK+VH+
Sbjct: 225 TISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHA 284
Query: 128 LGVKIGLQTNEYCETGFINLYCK-------------------------------SGEFTS 156
+K G +N++ +G +++YCK G+
Sbjct: 285 RVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVE 344
Query: 157 ARMVFDENPDPKLGSWNAVIGG---LSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSA 213
A+ +FD + L W A+ G L Q + R F+ + PD + MVS+ A
Sbjct: 345 AKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETN--TPDSLVMVSVLGA 402
Query: 214 CGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV----DMYGKCGRMDLAYKVFATMDE 269
C ++ G ++H + RT ILM LV DMY KCG ++ A ++F + E
Sbjct: 403 CSLQAYMEPGKEIHG------HSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFE 456
Query: 270 RNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCY 329
R+ + ++I G A HGH ++ + F M E G +P+ +TF+ +LSAC H G V EG Y
Sbjct: 457 RDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKY 516
Query: 330 FDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMP-MKPNSIVWGCLMGACETY 388
F M Y I+P HY CM+DL G+A LD+A++++E + ++ ++++ G + AC
Sbjct: 517 FKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWN 576
Query: 389 GNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRL 440
N E+ + V + L +E N Y+ ++N YA+ G W E++RIR M+ L
Sbjct: 577 KNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKEL 628
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/383 (20%), Positives = 151/383 (39%), Gaps = 88/383 (22%)
Query: 102 DRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLY------------- 148
D +T+ ++K + + G+Q+H + VK G ++ + I++Y
Sbjct: 124 DDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIF 183
Query: 149 --------------------CKSGEFTSARMVFDENPD-PKLGSWNAVIGGLSQGGLARD 187
C+ G+ A VF NP+ SWN +I G +Q G +
Sbjct: 184 NGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEE 243
Query: 188 AIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSL 247
A+++ V+M +G D + ++ + S+ L++G ++H V K ++ + + +
Sbjct: 244 ALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVL--KNGSYSNKFVSSGI 301
Query: 248 VDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGV---- 303
VD+Y KCG M A N+ S +S+IVGY+ G + EA F + E +
Sbjct: 302 VDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWT 361
Query: 304 ----------------------------RPNYVTFVGVLSACVHGGKVQEGRCYFDMMKN 335
P+ + V VL AC + Y + K
Sbjct: 362 AMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGAC-------SLQAYMEPGKE 414
Query: 336 VYGITPRL------QHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYG 389
++G + R + VD+ + G ++ A ++ + + +++++ ++ C +G
Sbjct: 415 IHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDS-SFERDTVMYNAMIAGCAHHG 473
Query: 390 NVEMGEYVAKHLQALEPWNDGAY 412
+ AK Q E +G +
Sbjct: 474 ------HEAKSFQHFEDMTEGGF 490
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 92/260 (35%), Gaps = 72/260 (27%)
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVI--------- 176
H +K G +NLY KSG AR VFDE + + SWNAVI
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 177 ------------------------GGLSQGGLARDAIRVFVNMRRH---GFAPDGVTMVS 209
G G +AI +F M R D T+ +
Sbjct: 71 KEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTT 130
Query: 210 LTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGR------------- 256
+ + ++ G QLH + K +SL+ MY KCG+
Sbjct: 131 MVKLSAKLTNVFYGEQLHGVL--VKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCV 188
Query: 257 --------------------MDLAYKVFATMDERNVS-SWTSLIVGYAMHGHVNEALECF 295
+D A VF E N + SW +LI GYA +G+ EAL+
Sbjct: 189 EFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMA 248
Query: 296 WCMREAGVRPNYVTFVGVLS 315
M E G++ + +F VL+
Sbjct: 249 VSMEENGLKWDEHSFGAVLN 268
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 203/383 (53%), Gaps = 10/383 (2%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELG-KQVHSL 128
+WN+I+ + + AL + LM++ V D T+ +L+ VC+ F L K +H +
Sbjct: 295 SWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLR-VCKFFEQPLPCKSIHGV 353
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
++ G ++NE + I+ Y A V D + S + +I GL+ G + +A
Sbjct: 354 IIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEA 413
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
I +F +MR P+ +T++SL +AC DL+ H ++ DI + S+V
Sbjct: 414 ISIFCHMRD---TPNAITVISLLNACSVSADLRTSKWAHGIAIR-RSLAINDISVGTSIV 469
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYV 308
D Y KCG +++A + F + E+N+ SWT +I YA++G ++AL F M++ G PN V
Sbjct: 470 DAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAV 529
Query: 309 TFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEE 368
T++ LSAC HGG V++G F M P LQHY C+VD+L RAG +D A+++++
Sbjct: 530 TYLAALSACNHGGLVKKGLMIFKSMVE-EDHKPSLQHYSCIVDMLSRAGEIDTAVELIKN 588
Query: 369 MP--MKPNSIVWGCLMGACET-YGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMW 425
+P +K + WG ++ C + + + V + LEP Y++ S+ +A + W
Sbjct: 589 LPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSW 648
Query: 426 KEVERIRSSMKEGRLAKVPAYSL 448
++V +R +KE ++ V YS+
Sbjct: 649 EDVAMMRRLVKERKVRVVAGYSM 671
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 144/330 (43%), Gaps = 35/330 (10%)
Query: 98 GVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSA 157
G P+ TL +V+ A C+S + G+++H ++ G + + +Y S SA
Sbjct: 122 GFEPNTSTLVLVIHA-CRSLWFD-GEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SA 178
Query: 158 RMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHG-FAPDGVTMVSLTSACGS 216
R +FDE + + SW+ VI Q +++F M PD VT+ S+ AC
Sbjct: 179 RKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTV 238
Query: 217 VGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWT 276
+ D+ +G +H + + D+ + NSL+DMY K +D A++VF RN+ SW
Sbjct: 239 MEDIDVGRSVHGFSIR-RGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWN 297
Query: 277 SLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSAC-----------VHGGKVQE 325
S++ G+ + +EALE F M + V + VT V +L C +HG ++
Sbjct: 298 SILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRR 357
Query: 326 G----RCYFDMMKNVYGITPRLQHYGCMVDL---------------LGRAGLLDEAMKMV 366
G + + Y + G ++D L AG DEA+ +
Sbjct: 358 GYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIF 417
Query: 367 EEMPMKPNSIVWGCLMGACETYGNVEMGEY 396
M PN+I L+ AC ++ ++
Sbjct: 418 CHMRDTPNAITVISLLNACSVSADLRTSKW 447
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 128/323 (39%), Gaps = 54/323 (16%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGV-LPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
W ++ Y+ ++ RAGV D + PIV KA + + G +
Sbjct: 24 KWREVVSGYSEIQ-------------RAGVQFNDPFVFPIVFKACAKLSWLFQGNSIA-- 68
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
+ Y K G+ S FD SWN ++ GL G +
Sbjct: 69 -----------------DFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEG 111
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
+ F +R GF P+ T+V + AC S+ G ++H V + + + NS++
Sbjct: 112 LWWFSKLRVWGFEPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQ--NSIL 167
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCM-REAGVRPNY 307
MY + A K+F M ER+V SW+ +I Y L+ F M EA P+
Sbjct: 168 CMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDC 226
Query: 308 VTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPR-----LQHYGC--MVDLLGRAGLLD 360
VT VL AC + GR +V+G + R + C ++D+ + +D
Sbjct: 227 VTVTSVLKACTVMEDIDVGR-------SVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVD 279
Query: 361 EAMKMVEEMPMKPNSIVWGCLMG 383
A ++ +E + N + W ++
Sbjct: 280 SAFRVFDETTCR-NIVSWNSILA 301
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 205/452 (45%), Gaps = 67/452 (14%)
Query: 62 LESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIEL 121
+E W +++ Y++ A+ + R G ++YT P VL A A +
Sbjct: 186 MEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRV 245
Query: 122 GKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQ 181
G QVH VK G +TN Y ++ I++Y K E SAR + + + SWN++I G +
Sbjct: 246 GVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVR 305
Query: 182 GGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI 241
GL +A+ +F M D T+ S+ + C ++ ++ + K T
Sbjct: 306 QGLIGEALSMFGRMHERDMKIDDFTIPSILN-CFALSRTEMKIASSAHCLIVKTGYATYK 364
Query: 242 LMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREA 301
L+ N+LVDMY K G MD A KVF M E++V SWT+L+ G +G +EAL+ F MR
Sbjct: 365 LVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVG 424
Query: 302 GVRPNYVTFVGVLSAC-----------VHG------------------------GKVQEG 326
G+ P+ + VLSA VHG G +++
Sbjct: 425 GITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDA 484
Query: 327 RCYFDMM-------------------------------KNVYGITPRLQHYGCMVDLLGR 355
F+ M + VYGITP +HY CM+DL GR
Sbjct: 485 NVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGR 544
Query: 356 AGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVL 415
+G + +++ +M ++P++ VW ++ A +GN+E GE AK L LEP N YV L
Sbjct: 545 SGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQL 604
Query: 416 SNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
SN+Y+ G E +R MK ++K P S
Sbjct: 605 SNMYSAAGRQDEAANVRRLMKSRNISKEPGCS 636
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 166/352 (47%), Gaps = 37/352 (10%)
Query: 61 FLESNPAP--FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFA 118
SNP +WN +I Y + + A L M G+ P+ YTL VL+ +C S
Sbjct: 81 LFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLR-MCTSLV 139
Query: 119 IEL-GKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLG-SWNAVI 176
+ L G+Q+H +K G + G + +Y + + A +F+ K +W +++
Sbjct: 140 LLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSML 199
Query: 177 GGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAA 236
G SQ G A AI F ++RR G + T S+ +AC SV ++G+Q+H C+ K+
Sbjct: 200 TGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCI--VKSG 257
Query: 237 ERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFW 296
+T+I + ++L+DMY KC M+ A + M+ +V SW S+IVG G + EAL F
Sbjct: 258 FKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFG 317
Query: 297 CMREAGVRPNYVTFVGVL------------SACVHGGKVQEGRCYFDMMKNVYGITPRLQ 344
M E ++ + T +L ++ H V+ G + ++ N
Sbjct: 318 RMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNA-------- 369
Query: 345 HYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEY 396
+VD+ + G++D A+K+ E M ++ + I W L+ GN G Y
Sbjct: 370 ----LVDMYAKRGIMDSALKVFEGM-IEKDVISWTALVT-----GNTHNGSY 411
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 126/253 (49%), Gaps = 10/253 (3%)
Query: 135 QTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVN 194
+ +E+ I Y S + A +F NP SWNA+I G + G +A +F
Sbjct: 56 ERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWE 115
Query: 195 MRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKC 254
M+ G P+ T+ S+ C S+ L G Q+H + K D+ + N L+ MY +C
Sbjct: 116 MQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHG--HTIKTGFDLDVNVVNGLLAMYAQC 173
Query: 255 GRMDLAYKVFATMD-ERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGV 313
R+ A +F TM+ E+N +WTS++ GY+ +G +A+ECF +R G + N TF V
Sbjct: 174 KRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSV 233
Query: 314 LSACVHGGKVQEG-RCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMK 372
L+AC + G + + ++K+ + +Q ++D+ + ++ A ++E M +
Sbjct: 234 LTACASVSACRVGVQVHCCIVKSGFKTNIYVQ--SALIDMYAKCREMESARALLEGMEVD 291
Query: 373 P----NSIVWGCL 381
NS++ GC+
Sbjct: 292 DVVSWNSMIVGCV 304
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 24/160 (15%)
Query: 234 KAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALE 293
K ER D WN+++ Y R+ A K+F + +N SW +LI GY G EA
Sbjct: 53 KMPER-DEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFN 111
Query: 294 CFWCMREAGVRPNYVTFVGVLSAC-----------VHGGKVQEGRCYFDMMKNVYGITPR 342
FW M+ G++PN T VL C +HG ++ G FD+ NV
Sbjct: 112 LFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTG---FDLDVNV------ 162
Query: 343 LQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLM 382
++ + + + EA + E M + N++ W ++
Sbjct: 163 ---VNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSML 199
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/436 (31%), Positives = 207/436 (47%), Gaps = 41/436 (9%)
Query: 10 RRCYSVSQRSITQTLLLDSANNPVTLIATQLCNCTHIHQLNQVYAHILRTHFLESNPAPF 69
R C + SQ T ++ L+ QL + + Q YA ++ +P+ F
Sbjct: 28 RTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQ-YASLVFNQL--QSPSTF 84
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLP-DRYTLPIVLKAVCQSFAIELGKQVHSL 128
WN +IR + PR AL L +LM+ + D++T P V+KA S +I LG QVH L
Sbjct: 85 TWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGL 144
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGL---SQGGLA 185
+K G + + + ++LY K G+ S R VFD+ P + SW ++ GL SQ A
Sbjct: 145 AIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSA 204
Query: 186 R----------------------------DAIRVFVNMRRHGFAPDGVTMVSLTSACGSV 217
+A ++F M+ P+ T+V+L A +
Sbjct: 205 EIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQL 264
Query: 218 GDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTS 277
G L +G +H Y K D + +L+DMY KCG + A KVF M +++++W S
Sbjct: 265 GSLSMGRWVHD--YAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNS 322
Query: 278 LIVGYAMHGHVNEALECFWCMRE-AGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNV 336
+I +HG EAL F M E A V P+ +TFVGVLSAC + G V++G YF M V
Sbjct: 323 MITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQV 382
Query: 337 YGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEY 396
YGI+P +H CM+ LL +A +++A +VE M P+ + G T G E E
Sbjct: 383 YGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD---FNSSFGNEYTDGMNETNET 439
Query: 397 VAKHLQALEPWNDGAY 412
++H W+ G +
Sbjct: 440 PSQHQIMFTKWDTGRF 455
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 110/310 (35%), Positives = 162/310 (52%), Gaps = 4/310 (1%)
Query: 142 TGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFA 201
T I+ Y ++G+ + A +F + D +W +I GL Q L +A + +M R G
Sbjct: 404 TSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLK 463
Query: 202 PDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAY 261
P T L S+ G+ +L G +H + A D+++ NSLV MY KCG ++ AY
Sbjct: 464 PLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAY 523
Query: 262 KVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGG 321
++FA M +++ SW S+I+G + HG ++AL F M ++G +PN VTF+GVLSAC H G
Sbjct: 524 EIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSG 583
Query: 322 KVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCL 381
+ G F MK Y I P + HY M+DLLGRAG L EA + + +P P+ V+G L
Sbjct: 584 LITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGAL 643
Query: 382 MGAC----ETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKE 437
+G C + E A L L+P N +V L N+YA G + +R M
Sbjct: 644 LGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGI 703
Query: 438 GRLAKVPAYS 447
+ K P S
Sbjct: 704 KGVKKTPGCS 713
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 159/398 (39%), Gaps = 105/398 (26%)
Query: 142 TGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRR--HG 199
T + YC+ G+ A +F E P+ + SW A+I G + L R+A+ +F+ M++
Sbjct: 235 TSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDA 294
Query: 200 FAPDGVTMVSLTSACGSVGD--LQLGLQLHTCVY------------------HAKAA--- 236
+P+G T++SL ACG +G +LG QLH V H A+
Sbjct: 295 VSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGL 354
Query: 237 ---------ERTDILMWNSLVDMYGKCGRMDLAYKVFATMDE-RNVSSWTSLIVGYAMHG 286
E D+ N +++ Y K G ++ A +F + + SWTS+I GY G
Sbjct: 355 IASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAG 414
Query: 287 HVNEALECF----------WC---------------------MREAGVRPNYVTFVGVLS 315
V+ A F W M G++P T+ +LS
Sbjct: 415 DVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLS 474
Query: 316 ACVHGGKVQEGR-----------CY----------------FDMMKNVYGITPRLQH--- 345
+ + +G+ CY +++ Y I ++
Sbjct: 475 SAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDT 534
Query: 346 --YGCMVDLLGRAGLLDEAMKMVEEM---PMKPNSIVWGCLMGACETYGNVEMGEYVAKH 400
+ M+ L GL D+A+ + +EM KPNS+ + ++ AC G + G + K
Sbjct: 535 VSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKA 594
Query: 401 LQ---ALEPWNDGAYVVLSNIYANKGMWKEVERIRSSM 435
++ +++P D Y+ + ++ G KE E S++
Sbjct: 595 MKETYSIQPGID-HYISMIDLLGRAGKLKEAEEFISAL 631
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 3/199 (1%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
W +I + E A L M+R G+ P T ++L + + ++ GK +H +
Sbjct: 434 WTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIA 493
Query: 131 KIG--LQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
K + + +++Y K G A +F + SWN++I GLS GLA A
Sbjct: 494 KTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKA 553
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
+ +F M G P+ VT + + SAC G + GL+L + + + I + S++
Sbjct: 554 LNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQ-PGIDHYISMI 612
Query: 249 DMYGKCGRMDLAYKVFATM 267
D+ G+ G++ A + + +
Sbjct: 613 DLLGRAGKLKEAEEFISAL 631
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 16/195 (8%)
Query: 148 YCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTM 207
Y K A +F E P + SW ++ L G + DA+ +F M V+
Sbjct: 118 YVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEMPERNV----VSW 172
Query: 208 VSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATM 267
+L + GD++ Q+ A D++ WN+++ Y + M+ A +F M
Sbjct: 173 NTLVTGLIRNGDMEKAKQVF------DAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDM 226
Query: 268 DERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGR 327
E+NV +WTS++ GY +G V EA F M E N V++ ++S +E
Sbjct: 227 SEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPER----NIVSWTAMISGFAWNELYREAL 282
Query: 328 CYF-DMMKNVYGITP 341
F +M K+V ++P
Sbjct: 283 MLFLEMKKDVDAVSP 297
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 72/144 (50%), Gaps = 15/144 (10%)
Query: 241 ILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMRE 300
++ W SL+ Y K G +D A +F M ERN+ + +++ GY +NEA F RE
Sbjct: 77 VVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLF---RE 133
Query: 301 AGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMM--KNVYGITPRLQHYGCMVDLLGRAGL 358
+ N V++ +L+A G+ ++ FD M +NV + +V L R G
Sbjct: 134 --MPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVS-------WNTLVTGLIRNGD 184
Query: 359 LDEAMKMVEEMPMKPNSIVWGCLM 382
+++A ++ + MP + + + W ++
Sbjct: 185 MEKAKQVFDAMPSR-DVVSWNAMI 207
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 119/378 (31%), Positives = 190/378 (50%), Gaps = 3/378 (0%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
W +I RL AL + ML++G + V+ + Q + +LG VH +
Sbjct: 314 WTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVL 373
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
+ G + I +Y K G + ++F+ + L SWNA+I G +Q A+
Sbjct: 374 RHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALL 433
Query: 191 VFVNMRRHGFAP-DGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
+F M+ D T+VSL AC S G L +G +H V ++ R L+ +LVD
Sbjct: 434 LFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVI--RSFIRPCSLVDTALVD 491
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
MY KCG ++ A + F ++ ++V SW LI GY HG + ALE + +G+ PN+V
Sbjct: 492 MYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVI 551
Query: 310 FVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
F+ VLS+C H G VQ+G F M +G+ P +H C+VDLL RA +++A K +E
Sbjct: 552 FLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKEN 611
Query: 370 PMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVE 429
+P+ V G ++ AC G E+ + + + + L+P + G YV L + +A W +V
Sbjct: 612 FTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVS 671
Query: 430 RIRSSMKEGRLAKVPAYS 447
+ M+ L K+P +S
Sbjct: 672 ESWNQMRSLGLKKLPGWS 689
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 184/398 (46%), Gaps = 15/398 (3%)
Query: 41 CNCTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVL 100
C C H+ ++ + + + +WN +I Y + L+L M G+
Sbjct: 190 CKCDHVGDAKDLFDQMEQRDMV-------SWNTMISGYASVGNMSEILKLLYRMRGDGLR 242
Query: 101 PDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMV 160
PD+ T L +E+G+ +H VK G + + +T I +Y K G+ ++ V
Sbjct: 243 PDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRV 302
Query: 161 FDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDL 220
+ P+ + W +I GL + G A A+ VF M + G + S+ ++C +G
Sbjct: 303 LETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSF 362
Query: 221 QLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIV 280
LG +H Y + D NSL+ MY KCG +D + +F M+ER++ SW ++I
Sbjct: 363 DLGASVHG--YVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIIS 420
Query: 281 GYAMHGHVNEALECFWCMREAGVRP-NYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGI 339
GYA + + +AL F M+ V+ + T V +L AC G + G+ ++ + I
Sbjct: 421 GYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF-I 479
Query: 340 TPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMG-EYVA 398
P +VD+ + G L+ A + + + K + + WG L+ +G ++ E +
Sbjct: 480 RPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK-DVVSWGILIAGYGFHGKGDIALEIYS 538
Query: 399 KHLQA-LEPWNDGAYVVLSNIYANKGMWKEVERIRSSM 435
+ L + +EP + VLS+ N GM ++ +I SSM
Sbjct: 539 EFLHSGMEPNHVIFLAVLSSCSHN-GMVQQGLKIFSSM 575
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 147/300 (49%), Gaps = 9/300 (3%)
Query: 94 MLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGE 153
ML +LPD +T P +LKA + G +H + G ++ Y + +NLY K G
Sbjct: 37 MLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGL 96
Query: 154 FTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSA 213
AR VF+E + + W A+IG S+ G+ +A + MR G P VT++ + S
Sbjct: 97 LAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSG 156
Query: 214 CGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVS 273
+ LQ L +Y DI + NS++++Y KC + A +F M++R++
Sbjct: 157 VLEITQLQC-LHDFAVIY----GFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMV 211
Query: 274 SWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGR-CYFDM 332
SW ++I GYA G+++E L+ + MR G+RP+ TF LS ++ GR + +
Sbjct: 212 SWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQI 271
Query: 333 MKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVE 392
+K + + L+ ++ + + G + + +++E +P K + + W ++ G E
Sbjct: 272 VKTGFDVDMHLK--TALITMYLKCGKEEASYRVLETIPNK-DVVCWTVMISGLMRLGRAE 328
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 144/323 (44%), Gaps = 28/323 (8%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+W +I CY+R A L M G+ P TL +L V + ++ +H
Sbjct: 114 HWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQC---LHDFA 170
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
V G + +NLYCK A+ +FD+ + SWN +I G + G + +
Sbjct: 171 VIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEIL 230
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
++ MR G PD T + S G++ DL++G LH + K D+ + +L+
Sbjct: 231 KLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQI--VKTGFDVDMHLKTALIT 288
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
MY KCG+ + +Y+V T+ ++V WT +I G G +AL F M ++G +
Sbjct: 289 MYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEA 348
Query: 310 FVGVLSACVHGGKVQEGRCYFDMMKNVYGI---------TPRLQHYGCMVDLLGRAGLLD 360
V+++C G FD+ +V+G TP L ++ + + G LD
Sbjct: 349 IASVVASCAQLGS-------FDLGASVHGYVLRHGYTLDTPALN---SLITMYAKCGHLD 398
Query: 361 EAMKMVEEMPMKP----NSIVWG 379
+++ + E M + N+I+ G
Sbjct: 399 KSLVIFERMNERDLVSWNAIISG 421
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 7/220 (3%)
Query: 172 WNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVY 231
+N+ I LS G + + F +M + PD T SL AC S+ L GL +H V
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 232 HAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEA 291
+D + +SLV++Y K G + A KVF M ER+V WT++I Y+ G V EA
Sbjct: 74 --VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEA 131
Query: 292 LECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVD 351
MR G++P VT + +LS + ++ + +C D +YG + M++
Sbjct: 132 CSLVNEMRFQGIKPGPVTLLEMLSGVL---EITQLQCLHD-FAVIYGFDCDIAVMNSMLN 187
Query: 352 LLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNV 391
L + + +A + ++M + + + W ++ + GN+
Sbjct: 188 LYCKCDHVGDAKDLFDQMEQR-DMVSWNTMISGYASVGNM 226
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 191 bits (486), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 110/311 (35%), Positives = 171/311 (54%), Gaps = 5/311 (1%)
Query: 135 QTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVN 194
Q N I+ Y K G+ SA +F ++A+I +Q G +DA+++F
Sbjct: 260 QKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQ 319
Query: 195 M--RRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYG 252
M R PD +T+ S+ SA +G+ G + + Y + + D L+ SL+D+Y
Sbjct: 320 MLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVES--YITEHGIKIDDLLSTSLIDLYM 377
Query: 253 KCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVG 312
K G A+K+F+ +++++ S++++I+G ++G EA F M E + PN VTF G
Sbjct: 378 KGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTG 437
Query: 313 VLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMK 372
+LSA H G VQEG F+ MK+ + + P HYG MVD+LGRAG L+EA ++++ MPM+
Sbjct: 438 LLSAYSHSGLVQEGYKCFNSMKD-HNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQ 496
Query: 373 PNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIR 432
PN+ VWG L+ A + NVE GE H LE G L+ IY++ G W + +R
Sbjct: 497 PNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVR 556
Query: 433 SSMKEGRLAKV 443
S+KE +L K
Sbjct: 557 DSIKEKKLCKT 567
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/477 (22%), Positives = 195/477 (40%), Gaps = 57/477 (11%)
Query: 2 LRFFFQLGRRCYSVSQ-RSITQTLLLDSANNPVTLIATQLCNCTHIHQLNQVYAHILRTH 60
LRFF Q RC + Q + + L+++ N+ ++ Q + T N + ++ R
Sbjct: 6 LRFFLQ---RCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRN-IVTYVKRIL 61
Query: 61 FLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIE 120
+ F+W ++R ++ + + +++ M +G+ P + + VL+A + +
Sbjct: 62 KGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMV 121
Query: 121 LGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLS 180
GK +H+ +K GL Y +TG + LY + G A+ FD+ + SWN+++ G
Sbjct: 122 DGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYL 181
Query: 181 QGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTD 240
+ G +A RVF + D V+ + S+ GD+ L + + A
Sbjct: 182 ESGELDEARRVFDKIPE----KDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPAS--- 234
Query: 241 ILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCM-- 298
WN L+ Y C M LA F M ++N SW ++I GY G V A E F M
Sbjct: 235 ---WNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSK 291
Query: 299 -------------------------------REAGVRPNYVTFVGVLSACVHGGKVQEGR 327
R + ++P+ +T V+SA G G
Sbjct: 292 KDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFG- 350
Query: 328 CYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKP----NSIVWGCLMG 383
+ + +GI ++DL + G +A KM + K ++++ GC +
Sbjct: 351 TWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGIN 410
Query: 384 ACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRL 440
T N + K + P N + L + Y++ G+ +E + +SMK+ L
Sbjct: 411 GMATEANSLFTAMIEKKI----PPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNL 463
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 197/379 (51%), Gaps = 3/379 (0%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
+W +I Y + + AL L + + + D L +L+A ++ + K++H
Sbjct: 453 ISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCH 512
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
++ GL + + +++Y K A VF+ + SW ++I + G +A
Sbjct: 513 ILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEA 571
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
+ +F M G + D V ++ + SA S+ L G ++H + I + ++V
Sbjct: 572 VELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAV--AVV 629
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYV 308
DMY CG + A VF ++ + + +TS+I Y MHG A+E F MR V P+++
Sbjct: 630 DMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHI 689
Query: 309 TFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEE 368
+F+ +L AC H G + EGR + +M++ Y + P +HY C+VD+LGRA + EA + V+
Sbjct: 690 SFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKM 749
Query: 369 MPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEV 428
M +P + VW L+ AC ++ E+GE A+ L LEP N G V++SN++A +G W +V
Sbjct: 750 MKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDV 809
Query: 429 ERIRSSMKEGRLAKVPAYS 447
E++R+ MK + K P S
Sbjct: 810 EKVRAKMKASGMEKHPGCS 828
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 131/251 (52%), Gaps = 6/251 (2%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
F WN +I Y P +AL L+ M GV + P +LKA + I G ++HSL
Sbjct: 148 FAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSL 207
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFD---ENPDPKLGSWNAVIGGLSQGGLA 185
VK+G + + +++Y K+ + ++AR +FD E D L WN+++ S G +
Sbjct: 208 LVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVL--WNSILSSYSTSGKS 265
Query: 186 RDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWN 245
+ + +F M G AP+ T+VS +AC +LG ++H V + + +++ + N
Sbjct: 266 LETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKS-STHSSELYVCN 324
Query: 246 SLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRP 305
+L+ MY +CG+M A ++ M+ +V +W SLI GY + EALE F M AG +
Sbjct: 325 ALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKS 384
Query: 306 NYVTFVGVLSA 316
+ V+ +++A
Sbjct: 385 DEVSMTSIIAA 395
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 117/227 (51%), Gaps = 5/227 (2%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFA-IELGKQVHSLG 129
WN+I+ Y+ L L M G P+ YT+ L A C F+ +LGK++H+
Sbjct: 252 WNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTA-CDGFSYAKLGKEIHASV 310
Query: 130 VKIGLQTNE-YCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
+K ++E Y I +Y + G+ A + + + + +WN++I G Q + ++A
Sbjct: 311 LKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEA 370
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
+ F +M G D V+M S+ +A G + +L G++LH Y K +++ + N+L+
Sbjct: 371 LEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHA--YVIKHGWDSNLQVGNTLI 428
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECF 295
DMY KC + F M ++++ SWT++I GYA + EALE F
Sbjct: 429 DMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELF 475
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 175/391 (44%), Gaps = 40/391 (10%)
Query: 64 SNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGK 123
+N WN++I+ Y + + AL M+ AG D ++ ++ A + + G
Sbjct: 347 NNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGM 406
Query: 124 QVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGG 183
++H+ +K G +N I++Y K F D L SW VI G +Q
Sbjct: 407 ELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQND 466
Query: 184 LARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILM 243
+A+ +F ++ + D + + S+ A + + + ++H H D ++
Sbjct: 467 CHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHC---HILRKGLLDTVI 523
Query: 244 WNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGV 303
N LVD+YGKC M A +VF ++ ++V SWTS+I A++G+ +EA+E F M E G+
Sbjct: 524 QNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGL 583
Query: 304 RPNYVTFVGVLSACVHGGKVQEGR---CYF----------------DM------MKNVYG 338
+ V + +LSA + +GR CY DM +++
Sbjct: 584 SADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKA 643
Query: 339 ITPRLQ-----HYGCMVDLLGRAGLLDEAMKMVEEMP---MKPNSIVWGCLMGACETYGN 390
+ R++ Y M++ G G A+++ ++M + P+ I + L+ AC G
Sbjct: 644 VFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGL 703
Query: 391 VEMGE---YVAKHLQALEPWNDGAYVVLSNI 418
++ G + +H LEPW + YV L ++
Sbjct: 704 LDEGRGFLKIMEHEYELEPWPEH-YVCLVDM 733
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 125/283 (44%), Gaps = 19/283 (6%)
Query: 109 VLKAVCQSFAIELGKQVHSLGVKIGLQTN-EYCETGFINLYCKSGEFTSARMVFDENPDP 167
VL+ + A+ G+Q+HS K ++ + +Y K G A VFDE PD
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDR 145
Query: 168 KLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLH 227
+WN +IG G A+ ++ NMR G + +L AC + D++ G +LH
Sbjct: 146 TAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELH 205
Query: 228 TCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDER-NVSSWTSLIVGYAMHG 286
+ + K + + N+LV MY K + A ++F E+ + W S++ Y+ G
Sbjct: 206 SLL--VKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSG 263
Query: 287 HVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYG-----ITP 341
E LE F M G PN T V L+AC +G Y + K ++ T
Sbjct: 264 KSLETLELFREMHMTGPAPNSYTIVSALTAC-------DGFSYAKLGKEIHASVLKSSTH 316
Query: 342 RLQHYGC--MVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLM 382
+ Y C ++ + R G + +A +++ +M + + W L+
Sbjct: 317 SSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 31/224 (13%)
Query: 214 CGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVS 273
CG + G QLH+ ++ + D L LV MYGKCG +D A KVF M +R
Sbjct: 90 CGKRRAVSQGRQLHSRIFKTFPSFELDFLA-GKLVFMYGKCGSLDDAEKVFDEMPDRTAF 148
Query: 274 SWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMM 333
+W ++I Y +G AL +W MR GV +F +L AC ++ G
Sbjct: 149 AWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG------- 201
Query: 334 KNVYGITPRLQHYG------CMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACET 387
++ + +L ++ +V + + L A ++ + K ++++W ++ + T
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 261
Query: 388 YGNVEMGEYVAKHLQALEPWND--------GAYVVLSNIYANKG 423
G K L+ LE + + +Y ++S + A G
Sbjct: 262 SG---------KSLETLELFREMHMTGPAPNSYTIVSALTACDG 296
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 195/387 (50%), Gaps = 16/387 (4%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WN ++ + R + AL + M R V +TL V+K ++ GKQVH++
Sbjct: 152 SWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMV 211
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDE-NPDPKLGSWNAVIGGLSQGGLARDA 188
V G + T I+ Y G A V++ N N++I G + R+
Sbjct: 212 VVTG-RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRN---RNY 267
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
F+ M R P+ + S + C DL +G Q+H CV + +D + N L+
Sbjct: 268 KEAFLLMSRQ--RPNVRVLSSSLAGCSDNSDLWIGKQIH-CV-ALRNGFVSDSKLCNGLM 323
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECF--WCMREAGVRPN 306
DMYGKCG++ A +F + ++V SWTS+I YA++G +ALE F C +GV PN
Sbjct: 324 DMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPN 383
Query: 307 YVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMV 366
VTF+ V+SAC H G V+EG+ F MMK Y + P +HY C +D+L +AG +E ++V
Sbjct: 384 SVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLV 443
Query: 367 EEMPMKPNS----IVWGCLMGACETYGNVEMGEYVAKHL-QALEPWNDGAYVVLSNIYAN 421
E M N +W ++ AC ++ GEYVA+ L + P N YV++SN YA
Sbjct: 444 ERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAA 503
Query: 422 KGMWKEVERIRSSMKEGRLAKVPAYSL 448
G W VE +R +K L K +SL
Sbjct: 504 MGKWDVVEELRGKLKNKGLVKTAGHSL 530
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 160/360 (44%), Gaps = 18/360 (5%)
Query: 84 PRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETG 143
P + L L + + RA +T VL A E G+QVH+L +K G +T +T
Sbjct: 65 PNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTA 124
Query: 144 FINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPD 203
I++Y K G + VF+ + L SWNA++ G + G ++A+ VF M R
Sbjct: 125 LIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEIS 184
Query: 204 GVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKV 263
T+ S+ C S+ LQ G Q+H V R +++ +++ Y G ++ A KV
Sbjct: 185 EFTLSSVVKTCASLKILQQGKQVHAMVV---VTGRDLVVLGTAMISFYSSVGLINEAMKV 241
Query: 264 FATMD-ERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGK 322
+ +++ + SLI G + + EA F M RPN L+ C
Sbjct: 242 YNSLNVHTDEVMLNSLISGCIRNRNYKEA---FLLMSRQ--RPNVRVLSSSLAGCSDNSD 296
Query: 323 VQEGR-CYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCL 381
+ G+ + ++N G + ++D+ G+ G + +A + +P K + + W +
Sbjct: 297 LWIGKQIHCVALRN--GFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSK-SVVSWTSM 353
Query: 382 MGACETYGN----VEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKE 437
+ A G+ +E+ + + + P N ++V+ + A+ G+ KE + MKE
Sbjct: 354 IDAYAVNGDGVKALEIFREMCEEGSGVLP-NSVTFLVVISACAHAGLVKEGKECFGMMKE 412
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 8/233 (3%)
Query: 155 TSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSAC 214
T A +FDE P L S N+ + + G D + +F+ + R T + AC
Sbjct: 35 THADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGAC 94
Query: 215 GSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSS 274
+ + G Q+H + K T + +L+DMY K G + + +VF +++E+++ S
Sbjct: 95 SLLSYPETGRQVHALMI--KQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVS 152
Query: 275 WTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMK 334
W +L+ G+ +G EAL F M V + T V+ C +Q+G+ M+
Sbjct: 153 WNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVV 212
Query: 335 NVYGITPR-LQHYG-CMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGAC 385
+T R L G M+ GL++EAMK+ + + + ++ L+ C
Sbjct: 213 ----VTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGC 261
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 194/415 (46%), Gaps = 38/415 (9%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAV-CQSFAIELGKQVHS 127
F WN +I + + L L ML + PD YT ++ A S + G+ VH+
Sbjct: 170 FAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHA 229
Query: 128 LGVKIGLQTNEYCETGFINLYCK-------------------------------SGEFTS 156
+ +K G + + ++ Y K GE
Sbjct: 230 VMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEK 289
Query: 157 ARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGS 216
A VF P+ + +W +I G + G A+R FV M + G D ++ AC
Sbjct: 290 ALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSG 349
Query: 217 VGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWT 276
+ L G +H C+ H + + N+LV++Y KCG + A + F + +++ SW
Sbjct: 350 LALLGHGKMIHGCLIHC--GFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWN 407
Query: 277 SLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNV 336
+++ + +HG ++AL+ + M +G++P+ VTF+G+L+ C H G V+EG F+ M
Sbjct: 408 TMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKD 467
Query: 337 YGITPRLQHYGCMVDLLGRAGLLDEAMKMVEE----MPMKPNSIVWGCLMGACETYGNVE 392
Y I + H CM+D+ GR G L EA + + N+ W L+GAC T+ + E
Sbjct: 468 YRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTE 527
Query: 393 MGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
+G V+K L+ EP + ++V+LSN+Y + G WKE E +R M E + K P S
Sbjct: 528 LGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCS 582
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 164/420 (39%), Gaps = 96/420 (22%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN ++ Y+RL + A+ L + + PD Y+ +L ++ G+++ SL +
Sbjct: 38 WNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVI 97
Query: 131 KIGLQTNEYCETGFINLYCK---------------------------------SGEFTSA 157
+ G + I++Y K + +F +A
Sbjct: 98 RSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAA 157
Query: 158 RMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGS- 216
VF E P +WN +I G + G + +F M F PD T SL +AC +
Sbjct: 158 LDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSAD 217
Query: 217 VGDLQLGLQLHTCV-----------------YHAKAAERTDIL------------MWNSL 247
++ G +H + ++ K R D + WNS+
Sbjct: 218 SSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSI 277
Query: 248 VDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNY 307
+D K G + A +VF E+N+ +WT++I GY +G +AL F M ++GV ++
Sbjct: 278 IDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDH 337
Query: 308 VTFVGVLSAC-----------VHGGKVQ---EGRCYF-DMMKNVYG-------------- 338
+ VL AC +HG + +G Y + + N+Y
Sbjct: 338 FAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGD 397
Query: 339 -ITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM---PMKPNSIVWGCLMGACETYGNVEMG 394
L + M+ G GL D+A+K+ + M +KP+++ + L+ C G VE G
Sbjct: 398 IANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEG 457
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 128/286 (44%), Gaps = 40/286 (13%)
Query: 142 TGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFA 201
T I KSG SAR VFD P+ +WN ++ S+ GL ++AI +F +R
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 202 PDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAY 261
PD + ++ S C S+G+++ G ++ + V ++ + + NSL+DMYGKC A
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVI--RSGFCASLPVNNSLIDMYGKCSDTLSAN 125
Query: 262 KVFATM--DERNVSSWTSL-------------------------------IVGYAMHGHV 288
KVF M D RN +W SL I G+A G +
Sbjct: 126 KVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKL 185
Query: 289 NEALECFWCMREAGVRPNYVTFVGVLSAC-VHGGKVQEGR-CYFDMMKNVYGITPRLQHY 346
L F M E+ +P+ TF +++AC V GR + M+KN G + ++
Sbjct: 186 ESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKN--GWSSAVEAK 243
Query: 347 GCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVE 392
++ + G D+AM+ +E + + + W ++ AC G E
Sbjct: 244 NSVLSFYTKLGSRDDAMRELESIEV-LTQVSWNSIIDACMKIGETE 288
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/368 (32%), Positives = 184/368 (50%), Gaps = 9/368 (2%)
Query: 86 NALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFI 145
AL+L ML+ GV ++L + A ++ +Q+H +K G N +T +
Sbjct: 400 KALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALL 459
Query: 146 NLYCKSGEFTSARMVFDENPDPKLGSWNA---VIGGLSQGGLARDAIRVF-VNMRRHGFA 201
++ + A +FD+ P L S A +IGG ++ GL A+ +F +
Sbjct: 460 DMCTRCERMADAEEMFDQWPS-NLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLF 518
Query: 202 PDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAY 261
D V++ + + CG++G ++G Q+H Y KA +DI + NSL+ MY KC D A
Sbjct: 519 LDEVSLTLILAVCGTLGFREMGYQIH--CYALKAGYFSDISLGNSLISMYAKCCDSDDAI 576
Query: 262 KVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSAC--VH 319
K+F TM E +V SW SLI Y + + +EAL + M E ++P+ +T V+SA
Sbjct: 577 KIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTE 636
Query: 320 GGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWG 379
K+ R F MK +Y I P +HY V +LG GLL+EA + MP++P V
Sbjct: 637 SNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLR 696
Query: 380 CLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGR 439
L+ +C + N + + VAK + + +P Y++ SNIY+ G W E IR M+E
Sbjct: 697 ALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERG 756
Query: 440 LAKVPAYS 447
K PA S
Sbjct: 757 YRKHPAKS 764
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 151/350 (43%), Gaps = 44/350 (12%)
Query: 64 SNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAG-VLPDRYTLPIVLKAVCQSFAIELG 122
S+P ++ +I ++RL AL++ M +AG V P+ YT +L A + LG
Sbjct: 141 SSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLG 200
Query: 123 KQVHSLGVKIGLQTNEYCETGFINLYCKSGEFT--SARMVFDENPDPKLGSWNAVIGGLS 180
Q+H L VK G + + ++LY K + +FDE P + SWN V+ L
Sbjct: 201 IQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLV 260
Query: 181 QGGLARDAIRVFVNMRR-HGFAPDGVTMVSLTSACGSVGDLQLGLQLH------------ 227
+ G + A +F M R GF D T+ +L S+C L G +LH
Sbjct: 261 KEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQEL 320
Query: 228 ----------TCVYHAKAAER-------TDILMWNSLVDMYGKCGRMDLAYKVFATMDER 270
+ + K E D + + ++ Y G +D A ++FA + E+
Sbjct: 321 SVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEK 380
Query: 271 NVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSAC--VHGGKVQE--- 325
N ++ +L+ G+ +GH +AL+ F M + GV + + AC V KV E
Sbjct: 381 NTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIH 440
Query: 326 GRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNS 375
G C +K P +Q ++D+ R + +A +M ++ P +S
Sbjct: 441 GFC----IKFGTAFNPCIQ--TALLDMCTRCERMADAEEMFDQWPSNLDS 484
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 138/296 (46%), Gaps = 25/296 (8%)
Query: 109 VLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPK 168
+L+ Q +E+ K VH+ +K+ + I+ Y K G A +VF P
Sbjct: 86 LLRLSAQYHDVEVTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLSSPT 144
Query: 169 LGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFA-PDGVTMVSLTSACGSVGDLQLGLQLH 227
+ S+ A+I G S+ L +A++VF MR+ G P+ T V++ +AC V LG+Q+H
Sbjct: 145 VVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIH 204
Query: 228 TCVYHAKAAERTDILMWNSLVDMYGK--CGRMDLAYKVFATMDERNVSSWTSLIVGYAMH 285
+ K+ + + NSL+ +Y K D K+F + +R+V+SW +++
Sbjct: 205 GLI--VKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKE 262
Query: 286 GHVNEALECFWCM-REAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQ 344
G ++A + F+ M R G + T +LS+C + GR ++G R+
Sbjct: 263 GKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGR-------ELHGRAIRI- 314
Query: 345 HYGCMVDLLGRAGLLDE-----AMKMVE---EMPMKPNSIVWGCLMGACETYGNVE 392
G M +L L+ MK VE EM M +++ + ++ A ++G V+
Sbjct: 315 --GLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVD 368
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 116/286 (40%), Gaps = 43/286 (15%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRA-GVLPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
+WN ++ + A L M R G D +TL +L + S + G+++H
Sbjct: 251 SWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGR 310
Query: 129 GVKIGLQTNEYCETGFINLYCKS-------------------------------GEFTSA 157
++IGL I Y K G SA
Sbjct: 311 AIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSA 370
Query: 158 RMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSV 217
+F + ++NA++ G + G A+++F +M + G ++ S ACG V
Sbjct: 371 VEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLV 430
Query: 218 GDLQLGLQLH-TCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVF----ATMDERNV 272
+ ++ Q+H C+ A + + +L+DM +C RM A ++F + +D
Sbjct: 431 SEKKVSEQIHGFCIKFGTAF---NPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKA 487
Query: 273 SSWTSLIVGYAMHGHVNEALECFW-CMREAGVRPNYVTFVGVLSAC 317
+ TS+I GYA +G ++A+ F + E + + V+ +L+ C
Sbjct: 488 T--TSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVC 531
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 167/353 (47%), Gaps = 43/353 (12%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN ++ Y + P L L + ML+ G P YT LK+ C EL +Q+HS+ V
Sbjct: 385 WNALLSGYANKDGPI-CLSLFLQMLQMGFRPTEYTFSTALKSCC---VTEL-QQLHSVIV 439
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFD---------------------------- 162
++G + N+Y + + Y K+ A ++ D
Sbjct: 440 RMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESV 499
Query: 163 ------ENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGS 216
E PD SWN I S+ + I +F +M + PD T VS+ S C
Sbjct: 500 KLISTLEQPDTV--SWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSK 557
Query: 217 VGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWT 276
+ DL LG +H + + D + N L+DMYGKCG + KVF E+N+ +WT
Sbjct: 558 LCDLTLGSSIHGLITKTDFS-CADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWT 616
Query: 277 SLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNV 336
+LI +HG+ EALE F G +P+ V+F+ +L+AC HGG V+EG F MK+
Sbjct: 617 ALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKD- 675
Query: 337 YGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYG 389
YG+ P + HY C VDLL R G L EA ++ EMP ++ VW + C +
Sbjct: 676 YGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNRFA 728
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 162/393 (41%), Gaps = 58/393 (14%)
Query: 41 CNCTHIHQLNQVYAHILRTHFLE------SNPAPFNWNNIIRCYTRLEAPRNALRLHVLM 94
C + ++ L Y TH E + +WN II + E P AL+L V M
Sbjct: 248 CEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSM 307
Query: 95 LRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEF 154
G P++ T VL + G+Q+H + +K G +T I+ Y K G
Sbjct: 308 PEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNL 367
Query: 155 TSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSAC 214
+R+ FD D + WNA++ G + + +F+ M + GF P T + +C
Sbjct: 368 EDSRLCFDYIRDKNIVCWNALLSGYANKD-GPICLSLFLQMLQMGFRPTEYTFSTALKSC 426
Query: 215 GSVGDLQLGLQLHTCVY-----------------HAK-------------AAERTDILMW 244
V +LQ QLH+ + +AK A+ T ++
Sbjct: 427 -CVTELQ---QLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPL 482
Query: 245 NSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVR 304
N + +Y + G+ + K+ +T+++ + SW I + + E +E F M ++ +R
Sbjct: 483 NIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIR 542
Query: 305 PNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGC--------MVDLLGRA 356
P+ TFV +LS C C + +++G+ + + C ++D+ G+
Sbjct: 543 PDKYTFVSILSLC-------SKLCDLTLGSSIHGLITK-TDFSCADTFVCNVLIDMYGKC 594
Query: 357 GLLDEAMKMVEEMPMKPNSIVWGCLMGACETYG 389
G + MK+ EE K N I W L+ +G
Sbjct: 595 GSIRSVMKVFEETREK-NLITWTALISCLGIHG 626
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 150/345 (43%), Gaps = 14/345 (4%)
Query: 63 ESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELG 122
E N FN II+ Y++ A + M G LP++ T+ +L C S + G
Sbjct: 77 ERNKVSFN--TIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLS--CASLDVRAG 132
Query: 123 KQVHSLGVKIGL-QTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQ 181
Q+H L +K GL + + T + LY + A VF++ P L +WN ++ L
Sbjct: 133 TQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGH 192
Query: 182 GGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI 241
G ++ + F + R G + + + + V DL + QLH K +I
Sbjct: 193 RGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSA--TKKGLDCEI 250
Query: 242 LMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREA 301
+ NSL+ YGKCG +A ++F ++ SW ++I A + +AL+ F M E
Sbjct: 251 SVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEH 310
Query: 302 GVRPNYVTFVGVLSACVHGGKVQEGRCYFDMM-KNVYGITPRLQHYGCMVDLLGRAGLLD 360
G PN T+V VL + GR M+ KN G + ++D + G L+
Sbjct: 311 GFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKN--GCETGIVLGNALIDFYAKCGNLE 368
Query: 361 EAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALE 405
++ ++ + N + W L+ Y N + ++ LQ L+
Sbjct: 369 DS-RLCFDYIRDKNIVCWNALLSG---YANKDGPICLSLFLQMLQ 409
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 141/325 (43%), Gaps = 43/325 (13%)
Query: 94 MLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGE 153
++R G + VLK V +++ KQ+H K GL I+ Y K G
Sbjct: 206 LVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGN 265
Query: 154 FTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSA 213
A +F + + SWNA+I ++ A+++FV+M HGF+P+ T VS+
Sbjct: 266 THMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGV 325
Query: 214 CGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVS 273
V L G Q+H + K T I++ N+L+D Y KCG ++ + F + ++N+
Sbjct: 326 SSLVQLLSCGRQIHGML--IKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIV 383
Query: 274 SWTSLIVGYA-MHGHVNEALECFWCMREAGVRPNYVTFVGVLSAC-------VHGGKVQE 325
W +L+ GYA G + L F M + G RP TF L +C +H V+
Sbjct: 384 CWNALLSGYANKDGPI--CLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRM 441
Query: 326 GRCYFDMMKNVYGITPRLQHYG---CMVDLL----------------------GRAGLLD 360
G Y D N Y ++ ++ Y M D L R G
Sbjct: 442 G--YED---NDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYH 496
Query: 361 EAMKMVEEMPMKPNSIVWGCLMGAC 385
E++K++ + +P+++ W + AC
Sbjct: 497 ESVKLISTLE-QPDTVSWNIAIAAC 520
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 3/217 (1%)
Query: 11 RCYSVSQRSITQTLLLDSANNPVTLIATQLCNCTHIHQLNQVYAHILRTHFLESNPAPFN 70
R Y+ +Q LLLD A+ P +++ + I+ Y ++ P +
Sbjct: 455 RSYAKNQLMNDALLLLDWASGPTSVVPLNIV--AGIYSRRGQYHESVKLISTLEQPDTVS 512
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN I +R + + L ML++ + PD+YT +L + + LG +H L
Sbjct: 513 WNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLIT 572
Query: 131 KIGLQ-TNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
K + + I++Y K G S VF+E + L +W A+I L G ++A+
Sbjct: 573 KTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEAL 632
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQL 226
F GF PD V+ +S+ +AC G ++ G+ L
Sbjct: 633 EKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGL 669
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 111/234 (47%), Gaps = 18/234 (7%)
Query: 95 LRAGVLPDRYTLPIVLKAVCQ---SFAIELGKQVHSLGVKIG--LQTNEYCETGFINLYC 149
L G L + + L VC+ SFA K +H+L + + L Y I+LY
Sbjct: 3 LSCGDLANHNDRVVSLLNVCRKAPSFART--KALHALSITLCSVLLQPVYVCNNIISLYE 60
Query: 150 KSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVS 209
K GE + A VFD+ P+ S+N +I G S+ G A VF MR G+ P+ T+
Sbjct: 61 KLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSG 120
Query: 210 LTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDE 269
L S C S+ D++ G QLH + D + L+ +YG+ +++A +VF M
Sbjct: 121 LLS-CASL-DVRAGTQLHG-LSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPF 177
Query: 270 RNVSSWTSLIVGYAMHGHVNEALECFWCMRE---AGVRPNYVTFVGVLS--ACV 318
+++ +W ++ ++ GH EC + RE G +F+GVL +CV
Sbjct: 178 KSLETWNHMM---SLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCV 228
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 79/170 (46%), Gaps = 10/170 (5%)
Query: 207 MVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFAT 266
+VSL + C LH + + + N+++ +Y K G + LA KVF
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQ 74
Query: 267 MDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSAC---VHGGKV 323
M ERN S+ ++I GY+ +G V++A F MR G PN T G+LS V G
Sbjct: 75 MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLDVRAGTQ 134
Query: 324 QEGRCYFDMMKNVYGITPRLQHYG-CMVDLLGRAGLLDEAMKMVEEMPMK 372
G + YG+ G C++ L GR LL+ A ++ E+MP K
Sbjct: 135 LHG------LSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFK 178
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 192/380 (50%), Gaps = 20/380 (5%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLK--AVCQSFAIELGKQVHSL 128
+N + + YT++ A ++ M GV PD T+ +L+ A C +A G V+
Sbjct: 470 FNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYA--RGSCVYGQ 527
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDE-NPDPKLGSWNAVIGGLSQGGLARD 187
+K G + + IN++ K +A ++FD+ + SWN ++ G G A +
Sbjct: 528 IIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEE 587
Query: 188 AIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSL 247
A+ F M+ F P+ VT V++ A + L++G+ +H+ + +T + NSL
Sbjct: 588 AVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPV--GNSL 645
Query: 248 VDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNY 307
VDMY KCG ++ + K F + + + SW +++ YA HG + A+ F M+E ++P+
Sbjct: 646 VDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDS 705
Query: 308 VTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVE 367
V+F+ VLSAC H G V+EG+ F+ M + I ++HY CMVDLLG+AGL EA++M+
Sbjct: 706 VSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMR 765
Query: 368 EMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKE 427
M +K + VWG L+ + + N+ + L LEP N Y +
Sbjct: 766 RMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHY-------------SQ 812
Query: 428 VERIRSSMKEGRLAKVPAYS 447
R+ R+ KVPA S
Sbjct: 813 DRRLGEVNNVSRIKKVPACS 832
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 171/368 (46%), Gaps = 40/368 (10%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLR-AGVLPDRYTLPIVLKAVCQSFAIELGK 123
+P WN++IR YTR R AL M G+ PD+Y+ LKA S + G
Sbjct: 61 DPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGL 120
Query: 124 QVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGG 183
++H L ++GL+++ Y T + +YCK+ + SAR VFD+ + +WN ++ GL+Q G
Sbjct: 121 RIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNG 180
Query: 184 LARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILM 243
+ A+ +F +MR D V++ +L A + + LH V ++ I
Sbjct: 181 CSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVI-----KKGFIFA 235
Query: 244 WNS-LVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAG 302
++S L+DMY C + A VF + ++ SSW +++ YA +G E LE F MR
Sbjct: 236 FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYD 295
Query: 303 VRPNYV---------TFVG--VLSACVHGGKVQEG----------------RC-YFDMMK 334
VR N V +VG V +H VQ+G +C ++ +
Sbjct: 296 VRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAE 355
Query: 335 NVY-GITPR-LQHYGCMVDLLGRAGLLDEAMKMVEEM---PMKPNSIVWGCLMGACETYG 389
++ I R + + M+ +AG DEA+ + +M +KPN++ ++ C
Sbjct: 356 QLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVA 415
Query: 390 NVEMGEYV 397
+G+ +
Sbjct: 416 ASRLGKSI 423
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 170/373 (45%), Gaps = 12/373 (3%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+W+ +I Y + A+ L M+R + P+ TL VL+ A LGK +H
Sbjct: 368 SWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYA 427
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
+K +++ T I++Y K G F+ A F+ P ++NA+ G +Q G A A
Sbjct: 428 IKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAF 487
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHA--KAAERTDILMWNSL 247
V+ NM+ HG PD TMV + C D G +CVY K ++ + ++L
Sbjct: 488 DVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARG----SCVYGQIIKHGFDSECHVAHAL 543
Query: 248 VDMYGKCGRMDLAYKVFATMD-ERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPN 306
++M+ KC + A +F E++ SW ++ GY +HG EA+ F M+ +PN
Sbjct: 544 INMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPN 603
Query: 307 YVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMV 366
VTFV ++ A ++ G + G + +VD+ + G+++ + K
Sbjct: 604 AVTFVNIVRAAAELSALRVGMSVHSSLIQC-GFCSQTPVGNSLVDMYAKCGMIESSEKCF 662
Query: 367 EEMPMKPNSIVWGCLMGACETYG--NVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGM 424
E+ K + W ++ A +G + + +++ L+P + VLS + G+
Sbjct: 663 IEISNK-YIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSAC-RHAGL 720
Query: 425 WKEVERIRSSMKE 437
+E +RI M E
Sbjct: 721 VEEGKRIFEEMGE 733
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 154/353 (43%), Gaps = 12/353 (3%)
Query: 41 CNCTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVL 100
CNC ++ V+ + R ES+ W ++ Y L L LM V
Sbjct: 245 CNCADLYAAESVFEEVWRKD--ESS-----WGTMMAAYAHNGFFEEVLELFDLMRNYDVR 297
Query: 101 PDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMV 160
++ L+A + G +H V+ GL + T +++Y K GE A +
Sbjct: 298 MNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQL 357
Query: 161 FDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDL 220
F D + SW+A+I Q G +AI +F +M R P+ VT+ S+ C V
Sbjct: 358 FINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAAS 417
Query: 221 QLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIV 280
+LG +H Y KA +++ +++ MY KCGR A K F + ++ ++ +L
Sbjct: 418 RLGKSIHC--YAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQ 475
Query: 281 GYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRC-YFDMMKNVYGI 339
GY G N+A + + M+ GV P+ T VG+L C G C Y ++K+ +
Sbjct: 476 GYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDS 535
Query: 340 TPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVE 392
+ H ++++ + L A+ + ++ + +++ W +M +G E
Sbjct: 536 ECHVAH--ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAE 586
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 138/306 (45%), Gaps = 11/306 (3%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
WN ++ + AL L M V D +L ++ AV + ++ + +H L
Sbjct: 168 TWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLV 227
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
+K G +G I++YC + +A VF+E SW ++ + G + +
Sbjct: 228 IKKGFIFA--FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVL 285
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
+F MR + + V S A VGDL G+ +H Y + D+ + SL+
Sbjct: 286 ELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHD--YAVQQGLIGDVSVATSLMS 343
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
MY KCG +++A ++F +++R+V SW+++I Y G +EA+ F M ++PN VT
Sbjct: 344 MYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVT 403
Query: 310 FVGVLSACVHGGKVQEGR---CYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMV 366
VL C + G+ CY +K I L+ ++ + + G A+K
Sbjct: 404 LTSVLQGCAGVAASRLGKSIHCY--AIKA--DIESELETATAVISMYAKCGRFSPALKAF 459
Query: 367 EEMPMK 372
E +P+K
Sbjct: 460 ERLPIK 465
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 132/289 (45%), Gaps = 19/289 (6%)
Query: 100 LPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARM 159
+P YT +++ C++F L QVH + GL+ + IN Y +R+
Sbjct: 1 MPINYTNLLLMLRECKNFRCLL--QVHGSLIVSGLKPH----NQLINAYSLFQRQDLSRV 54
Query: 160 VFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNM-RRHGFAPDGVTMVSLTSACGSVG 218
+FD DP + WN++I G ++ GL R+A+ F M G PD + AC
Sbjct: 55 IFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSM 114
Query: 219 DLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSL 278
D + GL++H + A+ +D+ + +LV+MY K + A +VF M ++V +W ++
Sbjct: 115 DFKKGLRIHDLI--AEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTM 172
Query: 279 IVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKN--- 335
+ G A +G + AL F MR V ++V+ ++ A K RC ++
Sbjct: 173 VSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF 232
Query: 336 VYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGA 384
++ + L +D+ L A + EE+ K S WG +M A
Sbjct: 233 IFAFSSGL------IDMYCNCADLYAAESVFEEVWRKDES-SWGTMMAA 274
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 245 NSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCM-REAGV 303
N L++ Y R DL+ +F ++ + V W S+I GY G EAL F M E G+
Sbjct: 37 NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGI 96
Query: 304 RPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAM 363
P+ +F L AC ++G D++ + G+ + +V++ +A L A
Sbjct: 97 DPDKYSFTFALKACAGSMDFKKGLRIHDLIAEM-GLESDVYIGTALVEMYCKARDLVSAR 155
Query: 364 KMVEEMPMKP----NSIVWGCLMGACET 387
++ ++M +K N++V G C +
Sbjct: 156 QVFDKMHVKDVVTWNTMVSGLAQNGCSS 183
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 168/329 (51%), Gaps = 2/329 (0%)
Query: 119 IELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGG 178
+ L QVHS V+ G IN+Y K G+ A+ VFD+ + ++
Sbjct: 253 LNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDA 312
Query: 179 LSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAER 238
Q +A+ +F M P+ T L ++ + L+ G LH V K+ R
Sbjct: 313 YFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVL--KSGYR 370
Query: 239 TDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCM 298
+++ N+LV+MY K G ++ A K F+ M R++ +W ++I G + HG EALE F M
Sbjct: 371 NHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRM 430
Query: 299 REAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGL 358
G PN +TF+GVL AC H G V++G YF+ + + + P +QHY C+V LL +AG+
Sbjct: 431 IFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGM 490
Query: 359 LDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNI 418
+A + P++ + + W L+ AC N +G+ VA++ P + G YV+LSNI
Sbjct: 491 FKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNI 550
Query: 419 YANKGMWKEVERIRSSMKEGRLAKVPAYS 447
+A W+ V ++RS M + K P S
Sbjct: 551 HAKSREWEGVAKVRSLMNNRGVKKEPGVS 579
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 2/207 (0%)
Query: 74 IIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIG 133
I+ Y + ++ AL L M V P+ YT I+L ++ + ++ G +H L +K G
Sbjct: 309 IMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSG 368
Query: 134 LQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFV 193
+ + +N+Y KSG AR F + +WN +I G S GL R+A+ F
Sbjct: 369 YRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFD 428
Query: 194 NMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGK 253
M G P+ +T + + AC +G ++ GL + K + DI + +V + K
Sbjct: 429 RMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLM-KKFDVQPDIQHYTCIVGLLSK 487
Query: 254 CGRMDLAYKVFATMD-ERNVSSWTSLI 279
G A T E +V +W +L+
Sbjct: 488 AGMFKDAEDFMRTAPIEWDVVAWRTLL 514
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 11/218 (5%)
Query: 210 LTSACGSVGDLQLGLQLHTCVYHAKAAERT-DILMWNSLVDMYGKCGRMDLAYKVFATMD 268
L C + L++G +H + + R D NSL+++Y KC A K+F M
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 269 ERNVSSWTSLIVGYAMHGHVNEALECFWCMREAG-VRPNYVTFVGVLSACVHGGKVQEGR 327
ERNV SW +++ GY G E L+ F M +G RPN V +C + G+++EG+
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156
Query: 328 ----CYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMG 383
C+ YG+ +V + EA+++++++P S+ L G
Sbjct: 157 QFHGCFLK-----YGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSG 211
Query: 384 ACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYAN 421
E E + + K WN+ Y+ +++N
Sbjct: 212 YLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSN 249
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 143/344 (41%), Gaps = 18/344 (5%)
Query: 97 AGVLPDRYTLPI-------VLKAVCQSFAIELGKQVHSLGVKIGLQT---NEYCETGFIN 146
A ++P P +LK S + +G+ +H+ + + + Y IN
Sbjct: 18 ASLVPKSKKTPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLIN 77
Query: 147 LYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFA-PDGV 205
LY K E AR +FD P+ + SW A++ G G + +++F +M G + P+
Sbjct: 78 LYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEF 137
Query: 206 TMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFA 265
+ +C + G ++ G Q H C K + + N+LV MY C A +V
Sbjct: 138 VATVVFKSCSNSGRIEEGKQFHGCFL--KYGLISHEFVRNTLVYMYSLCSGNGEAIRVLD 195
Query: 266 TMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQE 325
+ ++S ++S + GY G E L+ N +T++ L + +
Sbjct: 196 DLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNL 255
Query: 326 G-RCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGA 384
+ + M++ +G ++ G ++++ G+ G + A ++ ++ + N + +M A
Sbjct: 256 ALQVHSRMVR--FGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQ-NIFLNTTIMDA 312
Query: 385 CETYGNVEMGEYVAKHLQALE-PWNDGAYVVLSNIYANKGMWKE 427
+ E + + E P N+ + +L N A + K+
Sbjct: 313 YFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQ 356
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 188/378 (49%), Gaps = 34/378 (8%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN ++ Y ALRL M GV P+ T +++ ++ ++ ++ K +
Sbjct: 444 WNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF---- 499
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
+ +Q+ +G I P L SW ++ G+ Q G + +AI
Sbjct: 500 -LQMQS-----SGII---------------------PNLISWTTMMNGMVQNGCSEEAIL 532
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDIL-MWNSLVD 249
M+ G P+ ++ SAC + L +G +H Y + + + ++ + SLVD
Sbjct: 533 FLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHG--YIIRNLQHSSLVSIETSLVD 590
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
MY KCG ++ A KVF + + ++I YA++G++ EA+ + + G++P+ +T
Sbjct: 591 MYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNIT 650
Query: 310 FVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
VLSAC H G + + F + + + P L+HYG MVDLL AG ++A++++EEM
Sbjct: 651 ITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEM 710
Query: 370 PMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVE 429
P KP++ + L+ +C E+ +Y+++ L EP N G YV +SN YA +G W EV
Sbjct: 711 PFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVV 770
Query: 430 RIRSSMKEGRLAKVPAYS 447
++R MK L K P S
Sbjct: 771 KMREMMKAKGLKKKPGCS 788
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 198/393 (50%), Gaps = 18/393 (4%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
WN ++ Y + A+RL M + GV P R T+ L A +E GKQ H++ +
Sbjct: 242 WNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAI 301
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIR 190
G++ + T +N YCK G A MVFD + + +WN +I G Q GL DAI
Sbjct: 302 VNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIY 361
Query: 191 VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHT-CVYHAKAAERTDILMWNSLVD 249
+ MR D VT+ +L SA +L+LG ++ C+ H+ +DI++ ++++D
Sbjct: 362 MCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSF---ESDIVLASTVMD 418
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
MY KCG + A KVF + E+++ W +L+ YA G EAL F+ M+ GV PN +T
Sbjct: 419 MYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVIT 478
Query: 310 FVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEA---MKMV 366
+ ++ + + G+V E + F M++ GI P L + M++ + + G +EA ++ +
Sbjct: 479 WNLIILSLLRNGQVDEAKDMFLQMQS-SGIIPNLISWTTMMNGMVQNGCSEEAILFLRKM 537
Query: 367 EEMPMKPNSIVWGCLMGACETYGNVEMGE----YVAKHLQALEPWNDGAYVVLSNIYANK 422
+E ++PN+ + AC ++ +G Y+ ++LQ + +V ++YA
Sbjct: 538 QESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLV--DMYAKC 595
Query: 423 GMWKEVERIRSSMKEGRL----AKVPAYSLTTN 451
G + E++ S L A + AY+L N
Sbjct: 596 GDINKAEKVFGSKLYSELPLSNAMISAYALYGN 628
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 152/319 (47%), Gaps = 10/319 (3%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
F+W II R+ AL V ML + PD + +P V KA G+ VH
Sbjct: 139 FSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGY 198
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
VK GL+ + + ++Y K G A VFDE PD +WNA++ G Q G +A
Sbjct: 199 VVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEA 258
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
IR+F +MR+ G P VT+ + SA ++G ++ G Q H + E +IL SL+
Sbjct: 259 IRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHA-IAIVNGMELDNIL-GTSLL 316
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYV 308
+ Y K G ++ A VF M E++V +W +I GY G V +A+ MR ++ + V
Sbjct: 317 NFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCV 376
Query: 309 TFVGVLSACVHGGKVQEGR---CYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKM 365
T ++SA ++ G+ CY + + ++D+ + G + +A K+
Sbjct: 377 TLATLMSAAARTENLKLGKEVQCYCIR----HSFESDIVLASTVMDMYAKCGSIVDAKKV 432
Query: 366 VEEMPMKPNSIVWGCLMGA 384
+ ++ + I+W L+ A
Sbjct: 433 FDS-TVEKDLILWNTLLAA 450
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 141/290 (48%), Gaps = 20/290 (6%)
Query: 122 GKQVHSLGVKIG--LQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGL 179
GKQ+H+ +K G NEY ET + Y K A ++F + + SW A+IG
Sbjct: 89 GKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVK 148
Query: 180 SQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERT 239
+ GL A+ FV M + PD + ++ ACG++ + G +H Y K+
Sbjct: 149 CRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHG--YVVKSGLED 206
Query: 240 DILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMR 299
+ + +SL DMYGKCG +D A KVF + +RN +W +L+VGY +G EA+ F MR
Sbjct: 207 CVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMR 266
Query: 300 EAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDM-------MKNVYGITPRLQHYGCMVDL 352
+ GV P VT LSA + G V+EG+ + + N+ G + L ++ C V L
Sbjct: 267 KQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTS--LLNFYCKVGL 324
Query: 353 LGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQ 402
+ E +MV + + + + W ++ G VE Y+ + ++
Sbjct: 325 I-------EYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMR 367
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 99/215 (46%), Gaps = 8/215 (3%)
Query: 66 PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQV 125
P +W ++ + A+ M +G+ P+ +++ + L A ++ +G+ +
Sbjct: 509 PNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTI 568
Query: 126 HSLGVKIGLQTNEYC--ETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGG 183
H ++ LQ + ET +++Y K G+ A VF +L NA+I + G
Sbjct: 569 HGYIIR-NLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYG 627
Query: 184 LARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILM 243
++AI ++ ++ G PD +T+ ++ SAC GD+ +++ T + +K + + +
Sbjct: 628 NLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIV-SKRSMKPCLEH 686
Query: 244 WNSLVDMYGKCGRMDLAYKVFATM----DERNVSS 274
+ +VD+ G + A ++ M D R + S
Sbjct: 687 YGLMVDLLASAGETEKALRLIEEMPFKPDARMIQS 721
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 191/378 (50%), Gaps = 2/378 (0%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQ 124
+P +W +I ++ L + M++ V P+ TL VL+A + + +
Sbjct: 389 SPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLE 448
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGL 184
+H+ ++ + ++ Y S + A V ++ +++ ++ G
Sbjct: 449 IHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGK 508
Query: 185 ARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMW 244
A+ V M G D +++ SA ++G L+ G LH Y K+ +
Sbjct: 509 HEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLH--CYSVKSGFSGAASVL 566
Query: 245 NSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVR 304
NSLVDMY KCG ++ A KVF + +V SW L+ G A +G ++ AL F MR
Sbjct: 567 NSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETE 626
Query: 305 PNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMK 364
P+ VTF+ +LSAC +G G YF +MK +Y I P+++HY +V +LGRAG L+EA
Sbjct: 627 PDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATG 686
Query: 365 MVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGM 424
+VE M +KPN++++ L+ AC GN+ +GE +A AL P + Y++L+++Y G
Sbjct: 687 VVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGK 746
Query: 425 WKEVERIRSSMKEGRLAK 442
+ ++ R+ M E RL+K
Sbjct: 747 PELAQKTRNLMTEKRLSK 764
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 159/342 (46%), Gaps = 14/342 (4%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSF-AIELGK 123
N +W +I R AL+ + M++AGV P+ +T +L A SF +E GK
Sbjct: 187 NADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGA--SSFLGLEFGK 244
Query: 124 QVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGG 183
+HS + G+ N +T ++ Y + + A V + + + + W +V+ G +
Sbjct: 245 TIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNL 304
Query: 184 LARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILM 243
A++A+ F+ MR G P+ T ++ S C +V L G Q+H+ + TD+
Sbjct: 305 RAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDV-- 362
Query: 244 WNSLVDMYGKCGRMDL-AYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAG 302
N+LVDMY KC ++ A +VF M NV SWT+LI+G HG V + M +
Sbjct: 363 GNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKRE 422
Query: 303 VRPNYVTFVGVLSACV---HGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLL 359
V PN VT GVL AC H +V E Y + ++V G + +VD + +
Sbjct: 423 VEPNVVTLSGVLRACSKLRHVRRVLEIHAYL-LRRHVDG---EMVVGNSLVDAYASSRKV 478
Query: 360 DEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHL 401
D A ++ M + N I + L+ G EM V ++
Sbjct: 479 DYAWNVIRSMKRRDN-ITYTSLVTRFNELGKHEMALSVINYM 519
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 146/329 (44%), Gaps = 4/329 (1%)
Query: 64 SNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGK 123
S+ F W +I +T+ + +AL L M+ +G P+ +T V+++ I G
Sbjct: 85 SHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGG 144
Query: 124 QVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGG 183
+VH +K G + N + +LY K G+F A +F + SW +I L
Sbjct: 145 RVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGAR 204
Query: 184 LARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILM 243
R+A++ + M + G P+ T V L A +G L+ G +H+ + ++++
Sbjct: 205 KWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIP--LNVVL 261
Query: 244 WNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGV 303
SLVD Y + +M+ A +V + E++V WTS++ G+ + EA+ F MR G+
Sbjct: 262 KTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGL 321
Query: 304 RPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAM 363
+PN T+ +LS C + G+ V G +VD+ + +
Sbjct: 322 QPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKV-GFEDSTDVGNALVDMYMKCSASEVEA 380
Query: 364 KMVEEMPMKPNSIVWGCLMGACETYGNVE 392
V + PN + W L+ +G V+
Sbjct: 381 SRVFGAMVSPNVVSWTTLILGLVDHGFVQ 409
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 163/425 (38%), Gaps = 93/425 (21%)
Query: 45 HIHQLNQVYAHILRTH--------------FLESNPAPFNWNNIIR--------CYTRLE 82
H+ ++ +++A++LR H + S + W N+IR YT L
Sbjct: 442 HVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAW-NVIRSMKRRDNITYTSLV 500
Query: 83 APRNALRLHVLMLRA-------GVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQ 135
N L H + L G+ D+ +LP + A A+E GK +H VK G
Sbjct: 501 TRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFS 560
Query: 136 TNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNM 195
+++Y K G A+ VF+E P + SWN ++ GL+ G A+ F M
Sbjct: 561 GAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEM 620
Query: 196 RRHGFAPDGVTMVSLTSAC--GSVGDLQLG-LQLHTCVYHAKAAERTDILMWNSLVDMYG 252
R PD VT + L SAC G + DL L Q+ +Y+ + + + LV + G
Sbjct: 621 RMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEP----QVEHYVHLVGILG 676
Query: 253 KCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVG 312
+ GR++ A V TM ++PN + F
Sbjct: 677 RAGRLEEATGVVETMH----------------------------------LKPNAMIFKT 702
Query: 313 VLSACVHGGKVQEGRCYFDMMKNVYGITPRLQH-YGCMVDLLGRAGLLDEAMKMVEEMPM 371
+L AC + G + G DM + P Y + DL +G + A K M
Sbjct: 703 LLRACRYRGNLSLGE---DMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTE 759
Query: 372 KPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERI 431
K S G E G V +V++ + ++ N G++ E+E I
Sbjct: 760 KRLSKKLG--KSTVEVQGKVH--SFVSEDVTRVDKTN--------------GIYAEIESI 801
Query: 432 RSSMK 436
+ +K
Sbjct: 802 KEEIK 806
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 2/209 (0%)
Query: 108 IVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDP 167
I + + C+S + +G +H +K GL N ++LY K+ +AR +FDE
Sbjct: 28 IRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHR 87
Query: 168 KLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLH 227
+ +W +I ++ A+ +F M G P+ T S+ +C + D+ G ++H
Sbjct: 88 TVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVH 147
Query: 228 TCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGH 287
V K + ++ +SL D+Y KCG+ A ++F+++ + SWT +I
Sbjct: 148 GSVI--KTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARK 205
Query: 288 VNEALECFWCMREAGVRPNYVTFVGVLSA 316
EAL+ + M +AGV PN TFV +L A
Sbjct: 206 WREALQFYSEMVKAGVPPNEFTFVKLLGA 234
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 86/200 (43%), Gaps = 13/200 (6%)
Query: 221 QLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIV 280
++GL +H V E D + N+L+ +Y K + A K+F M R V +WT +I
Sbjct: 40 RIGLHIHCPVIKFGLLENLD--LCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMIS 97
Query: 281 GYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQ-EGRCYFDMMKNVYGI 339
+ AL F M +G PN TF V+ +C + GR + ++K G
Sbjct: 98 AFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKT--GF 155
Query: 340 TPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVW----GCLMGACETYGNVEMGE 395
+ DL + G EA ++ + ++I W L+GA + E +
Sbjct: 156 EGNSVVGSSLSDLYSKCGQFKEACELFSSL-QNADTISWTMMISSLVGARKWR---EALQ 211
Query: 396 YVAKHLQALEPWNDGAYVVL 415
+ ++ ++A P N+ +V L
Sbjct: 212 FYSEMVKAGVPPNEFTFVKL 231
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 192/402 (47%), Gaps = 14/402 (3%)
Query: 52 VYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLK 111
V+ + L + +WN +I + AL LM + PD YT+ +V+
Sbjct: 184 VFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVS 243
Query: 112 AVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGS 171
+ GKQ +L +K+G +N I+++ K + +F E L
Sbjct: 244 ICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRE-----LEK 298
Query: 172 W-----NAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQL 226
W N++IG S DA+R+F+ PD T S+ S+ +V L G +
Sbjct: 299 WDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVM-LDHGADV 357
Query: 227 HTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHG 286
H+ V K D + SL++MY K G +DLA VFA D +++ W ++I+G A +
Sbjct: 358 HSLVI--KLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNS 415
Query: 287 HVNEALECF-WCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQH 345
E+L F + ++P+ VT +G+L AC + G V EG F M+ +G+ P +H
Sbjct: 416 RAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEH 475
Query: 346 YGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALE 405
Y C+++LL R G+++EA + +++P +P+S +W ++ A G+ + E VAK + E
Sbjct: 476 YACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESE 535
Query: 406 PWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGRLAKVPAYS 447
P + Y+VL IY W+ ++R +M E +L S
Sbjct: 536 PKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSS 577
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 164/357 (45%), Gaps = 12/357 (3%)
Query: 66 PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQV 125
P+ ++ ++ ++P A +H +L AG + Y L+ +S ++ Q+
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLA 185
T C G K+G +A +FDE P+ + SWN +I GL G
Sbjct: 62 FDDIPDKNTITWNVCLKGLF----KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFH 117
Query: 186 RDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWN 245
IRVF +M+R P T L S V + G Q+H R ++++WN
Sbjct: 118 EYGIRVFFDMQRWEIRPTEFTFSILASLVTCV---RHGEQIHGNAI-CSGVSRYNLVVWN 173
Query: 246 SLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRP 305
S++DMY + G D A VF TM++R+V SW LI+ + G+ AL+ FW MRE ++P
Sbjct: 174 SVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQP 233
Query: 306 NYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKM 365
+ T V+S C ++ +G+ + + G G +D+ + LD+++K+
Sbjct: 234 DEYTVSMVVSICSDLRELSKGKQALALCIKM-GFLSNSIVLGAGIDMFSKCNRLDDSVKL 292
Query: 366 VEEMPMKPNSIVWGCLMGACETY--GNVEMGEYVAKHLQALEPWNDGAYVVLSNIYA 420
E+ K +S++ ++G+ + G + ++ Q++ P VLS++ A
Sbjct: 293 FRELE-KWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNA 348
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 187/384 (48%), Gaps = 9/384 (2%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
+WN+I+ + ++L L M G P L ++ I+ GKQ+H
Sbjct: 281 ISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCY 340
Query: 129 GVKIGLQTNE-YCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARD 187
+K+G + + ++ I++Y K ++ +++ P L N+++ L G+ +D
Sbjct: 341 VLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKD 400
Query: 188 AIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVY----HAKAAERTDILM 243
I +F M G D VT+ ++ A L L LH+C K+ D+ +
Sbjct: 401 IIEMFGLMIDEGTGIDEVTLSTVLKALS----LSLPESLHSCTLVHCCAIKSGYAADVAV 456
Query: 244 WNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGV 303
SL+D Y K G+ +++ KVF +D N+ TS+I GYA +G + ++ M +
Sbjct: 457 SCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNL 516
Query: 304 RPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAM 363
P+ VT + VLS C H G V+EG FD +++ YGI+P + Y CMVDLLGRAGL+++A
Sbjct: 517 IPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAE 576
Query: 364 KMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKG 423
+++ + + + W L+ +C + N +G A+ L LEP N Y+ +S Y G
Sbjct: 577 RLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIG 636
Query: 424 MWKEVERIRSSMKEGRLAKVPAYS 447
++ +IR L + YS
Sbjct: 637 DFEISRQIREIAASRELMREIGYS 660
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 136/304 (44%), Gaps = 7/304 (2%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+N +I +R A+ L+ M+ G+ T P VL G QVH
Sbjct: 79 TYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRV 138
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
+ +G N + + + LY A +FDE D L N ++ Q G ++
Sbjct: 139 ISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLF 198
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
V++ M G A +G+T + C + G QLH+ V + ++I + N LVD
Sbjct: 199 EVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKS-GWNISNIFVANVLVD 257
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
Y CG + + + F + E++V SW S++ A +G V ++L+ F M+ G RP+
Sbjct: 258 YYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRP 317
Query: 310 FVGVLSACVHGGKVQEGR---CYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMV 366
F+ L+ C +Q G+ CY ++K + ++ L ++D+ G+ ++ + +
Sbjct: 318 FMSFLNFCSRNSDIQSGKQIHCY--VLKMGFDVSS-LHVQSALIDMYGKCNGIENSALLY 374
Query: 367 EEMP 370
+ +P
Sbjct: 375 QSLP 378
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 106/247 (42%), Gaps = 3/247 (1%)
Query: 145 INLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDG 204
I+ KSG SA FDE + ++N +I G S+ G + AI ++ M G
Sbjct: 53 IDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESA 112
Query: 205 VTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVF 264
T S+ S C + G+Q+H V ++ + ++LV +Y +D+A K+F
Sbjct: 113 STFPSVLSVCSDELFCREGIQVHCRVISLGFG--CNMFVRSALVGLYACLRLVDVALKLF 170
Query: 265 ATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQ 324
M +RN++ L+ + G E + M GV N +T+ ++ C H V
Sbjct: 171 DEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVY 230
Query: 325 EGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGA 384
EG+ ++ + +VD G L +M+ +P K + I W ++
Sbjct: 231 EGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEK-DVISWNSIVSV 289
Query: 385 CETYGNV 391
C YG+V
Sbjct: 290 CADYGSV 296
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 102/309 (33%), Positives = 164/309 (53%), Gaps = 9/309 (2%)
Query: 142 TGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHG-F 200
TGFI ++ E A +FD P+ + SW +I G + +A+ VF M R G
Sbjct: 272 TGFI----RNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSV 327
Query: 201 APDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLA 260
P+ T VS+ SAC + L G Q+H + +K+ + + ++ ++L++MY K G + A
Sbjct: 328 KPNVGTYVSILSACSDLAGLVEGQQIHQLI--SKSVHQKNEIVTSALLNMYSKSGELIAA 385
Query: 261 YKVFAT--MDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACV 318
K+F + +R++ SW S+I YA HGH EA+E + MR+ G +P+ VT++ +L AC
Sbjct: 386 RKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACS 445
Query: 319 HGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVW 378
H G V++G +F + + R +HY C+VDL GRAG L + + + + +
Sbjct: 446 HAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFY 505
Query: 379 GCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEG 438
G ++ AC + V + + V K + + G YV++SNIYA G +E +R MKE
Sbjct: 506 GAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEK 565
Query: 439 RLAKVPAYS 447
L K P S
Sbjct: 566 GLKKQPGCS 574
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 145/310 (46%), Gaps = 22/310 (7%)
Query: 119 IELG--KQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVI 176
I+LG ++ L ++ + N T ++ Y +S + + A M+F E P+ + SWN +I
Sbjct: 88 IKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMI 147
Query: 177 GGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAA 236
G +Q G A+ +F M V+ S+ A G + + L +
Sbjct: 148 DGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQRGRIDEAMNLF------ERM 197
Query: 237 ERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFW 296
R D++ W ++VD K G++D A ++F M ERN+ SW ++I GYA + ++EA + F
Sbjct: 198 PRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQ 257
Query: 297 CMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMM--KNVYGITPRLQHYGCMVDLLG 354
M E ++ ++ +++ + ++ + FD M KNV T + Y V+
Sbjct: 258 VMPER----DFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGY---VENKE 310
Query: 355 RAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHL-QALEPWNDGAYV 413
L+ KM+ + +KPN + ++ AC + G+ + + + +++ N+
Sbjct: 311 NEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTS 370
Query: 414 VLSNIYANKG 423
L N+Y+ G
Sbjct: 371 ALLNMYSKSG 380
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 122/262 (46%), Gaps = 6/262 (2%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAG-VLPDRYTLPIVLKAVCQSFAIELGKQVHS 127
+W +I Y + AL + MLR G V P+ T +L A + G+Q+H
Sbjct: 296 ISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQ 355
Query: 128 LGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENP--DPKLGSWNAVIGGLSQGGLA 185
L K Q NE + +N+Y KSGE +AR +FD L SWN++I + G
Sbjct: 356 LISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHG 415
Query: 186 RDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWN 245
++AI ++ MR+HGF P VT ++L AC G ++ G++ + ++ + +
Sbjct: 416 KEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLRE-EHYT 474
Query: 246 SLVDMYGKCGRMDLAYKVFATMDER-NVSSWTSLIVGYAMHGHVNEALECFWCMREAGVR 304
LVD+ G+ GR+ D R + S + +++ +H V+ A E + E G
Sbjct: 475 CLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETG-S 533
Query: 305 PNYVTFVGVLSACVHGGKVQEG 326
+ T+V + + GK +E
Sbjct: 534 DDAGTYVLMSNIYAANGKREEA 555
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 18/229 (7%)
Query: 144 FINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPD 203
I CK G+ AR +FD P+ + +W VI G + G R+A +F +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 204 GVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKV 263
MVS G + QL + + + ER +++ WN+++D Y + GR+D A ++
Sbjct: 112 WTAMVS-----GYLRSKQLSI---AEMLFQEMPER-NVVSWNTMIDGYAQSGRIDKALEL 162
Query: 264 FATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKV 323
F M ERN+ SW S++ G ++EA+ F E R + V++ ++ GKV
Sbjct: 163 FDEMPERNIVSWNSMVKALVQRGRIDEAMNLF----ERMPRRDVVSWTAMVDGLAKNGKV 218
Query: 324 QEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMK 372
E R FD M I+ + M+ + +DEA ++ + MP +
Sbjct: 219 DEARRLFDCMPERNIIS-----WNAMITGYAQNNRIDEADQLFQVMPER 262
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 15/171 (8%)
Query: 224 LQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYA 283
L +Y + + R W L+ K G++ A K+F + ER+V +WT +I GY
Sbjct: 31 FNLVRSIYSSSSRPRVPQPEW--LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYI 88
Query: 284 MHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMM--KNVYGITP 341
G + EA E F R N VT+ ++S + ++ F M +NV
Sbjct: 89 KLGDMREARELF---DRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVS--- 142
Query: 342 RLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVE 392
+ M+D ++G +D+A+++ +EMP + N + W ++ A G ++
Sbjct: 143 ----WNTMIDGYAQSGRIDKALELFDEMPER-NIVSWNSMVKALVQRGRID 188
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 164/333 (49%), Gaps = 4/333 (1%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WN ++ Y AL LM + D TL +L +++GKQ H
Sbjct: 362 SWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFI 421
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLG-SWNAVIGGLSQGGLARDA 188
+ G TN +++Y K G SA + F + + + SWNA++ G+++ G + A
Sbjct: 422 YRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQA 481
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
+ F M+ P T+ +L + C ++ L LG +H + + + D+++ ++V
Sbjct: 482 LSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHG--FLIRDGYKIDVVIRGAMV 538
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYV 308
DMY KC D A +VF R++ W S+I G +G E E F + GV+P++V
Sbjct: 539 DMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHV 598
Query: 309 TFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEE 368
TF+G+L AC+ G V+ G YF M Y I+P+++HY CM++L + G L + + +
Sbjct: 599 TFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLL 658
Query: 369 MPMKPNSIVWGCLMGACETYGNVEMGEYVAKHL 401
MP P + + AC+ Y ++G + AK L
Sbjct: 659 MPFDPPMQMLTRINDACQRYRWSKLGAWAAKRL 691
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 166/353 (47%), Gaps = 42/353 (11%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQ 124
NP+ +WN I+R Y + A+ + ML V P +T+ V+ A +S A+E+GK
Sbjct: 225 NPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKV 284
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDEN-------------------- 164
+H++ VK+ + + T ++Y K SAR VFD+
Sbjct: 285 IHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGL 344
Query: 165 -----------PDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSA 213
P+ + SWNA++GG +A+ MR+ D VT+V + +
Sbjct: 345 TREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNV 404
Query: 214 CGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDE-RNV 272
C + D+Q+G Q H +Y + T++++ N+L+DMYGKCG + A F M E R+
Sbjct: 405 CSGISDVQMGKQAHGFIY--RHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDE 462
Query: 273 SSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFD- 331
SW +L+ G A G +AL F M + +P+ T +L+ C + + G+
Sbjct: 463 VSWNALLTGVARVGRSEQALSFFEGM-QVEAKPSKYTLATLLAGCANIPALNLGKAIHGF 521
Query: 332 MMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKP----NSIVWGC 380
++++ Y I ++ G MVD+ + D A+++ +E + NSI+ GC
Sbjct: 522 LIRDGYKIDVVIR--GAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGC 572
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 121/266 (45%), Gaps = 6/266 (2%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+WN +I + R+ M R GV + VLK+ + L +Q+H
Sbjct: 129 SWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAV 188
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
VK G N ET +++Y K + AR VFDE +P SWN ++ + G +A+
Sbjct: 189 VKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAV 248
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVD 249
+F M P T+ S+ AC L++G +H K + D ++ S+ D
Sbjct: 249 VMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIA--VKLSVVADTVVSTSVFD 306
Query: 250 MYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVT 309
MY KC R++ A +VF +++ SWTS + GYAM G EA E F M E N V+
Sbjct: 307 MYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPER----NIVS 362
Query: 310 FVGVLSACVHGGKVQEGRCYFDMMKN 335
+ +L VH + E + +M+
Sbjct: 363 WNAMLGGYVHAHEWDEALDFLTLMRQ 388
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 119/269 (44%), Gaps = 33/269 (12%)
Query: 145 INLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDG 204
I Y K G AR +F+E P+ GSWNAVI +Q G++ + R+F M R G
Sbjct: 103 IEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATE 162
Query: 205 VTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVF 264
+ + +CG + DL+L QLH V K ++ + S+VD+YGKC M A +VF
Sbjct: 163 TSFAGVLKSCGLILDLRLLRQLHCAV--VKYGYSGNVDLETSIVDVYGKCRVMSDARRVF 220
Query: 265 ATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQ 324
+ + SW ++ Y G +EA+ F+ M E VRP T V+ AC ++
Sbjct: 221 DEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALE 280
Query: 325 EGRCY-------------------FDM---------MKNVYGIT--PRLQHYGCMVDLLG 354
G+ FDM + V+ T L+ + +
Sbjct: 281 VGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYA 340
Query: 355 RAGLLDEAMKMVEEMPMKPNSIVWGCLMG 383
+GL EA ++ + MP + N + W ++G
Sbjct: 341 MSGLTREARELFDLMPER-NIVSWNAMLG 368
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 6/144 (4%)
Query: 241 ILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMRE 300
I + N ++ YGKCG +D A ++F M ER+ SW ++I A +G +E F M
Sbjct: 96 IFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNR 155
Query: 301 AGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNV--YGITPRLQHYGCMVDLLGRAGL 358
GVR +F GVL +C G + + R + V YG + + +VD+ G+ +
Sbjct: 156 DGVRATETSFAGVLKSC---GLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRV 212
Query: 359 LDEAMKMVEEMPMKPNSIVWGCLM 382
+ +A ++ +E+ + P+ + W ++
Sbjct: 213 MSDARRVFDEI-VNPSDVSWNVIV 235
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 196/399 (49%), Gaps = 20/399 (5%)
Query: 31 NPVTLI-ATQLCNCTH-IHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNAL 88
N VT++ A C+C I+Q ++V++ ++ F++ N+++ Y++ +A
Sbjct: 351 NAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDD---VLVGNSLVDMYSKCGKLEDAR 407
Query: 89 RLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLY 148
++ + D YT ++ CQ+ ++ + L+ N I+ Y
Sbjct: 408 KV----FDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGY 463
Query: 149 CKSGEFTSA-----RMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPD 203
K+G+ A RM D +WN +I G Q G +A+ +F M+ F P+
Sbjct: 464 IKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPN 523
Query: 204 GVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDIL--MWNSLVDMYGKCGRMDLAY 261
VT++SL AC ++ ++ ++H CV D + + N+L D Y K G ++ +
Sbjct: 524 SVTILSLLPACANLLGAKMVREIHGCVLR----RNLDAIHAVKNALTDTYAKSGDIEYSR 579
Query: 262 KVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGG 321
+F M+ +++ +W SLI GY +HG AL F M+ G+ PN T ++ A G
Sbjct: 580 TIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMG 639
Query: 322 KVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCL 381
V EG+ F + N Y I P L+H MV L GRA L+EA++ ++EM ++ + +W
Sbjct: 640 NVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESF 699
Query: 382 MGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYA 420
+ C +G+++M + A++L +LEP N ++S IYA
Sbjct: 700 LTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYA 738
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 155/313 (49%), Gaps = 19/313 (6%)
Query: 94 MLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQT--NEYCETGFINLYCKS 151
+ + G R T +L++ S +I LG+ +H+ + GL T + + ET +++Y K
Sbjct: 72 LFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEPDVFVETKLLSMYAKC 128
Query: 152 GEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLT 211
G AR VFD + L +W+A+IG S+ R+ ++F M + G PD +
Sbjct: 129 GCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKIL 188
Query: 212 SACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERN 271
C + GD++ G +H+ V K + + + NS++ +Y KCG +D A K F M ER+
Sbjct: 189 QGCANCGDVEAGKVIHSVVI--KLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERD 246
Query: 272 VSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRC--Y 329
V +W S+++ Y +G EA+E M + G+ P VT+ ++ GG Q G+C
Sbjct: 247 VIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILI-----GGYNQLGKCDAA 301
Query: 330 FDMMKNV--YGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMK---PNSIVWGCLMGA 384
D+M+ + +GIT + + M+ L G+ +A+ M +M + PN++ + A
Sbjct: 302 MDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSA 361
Query: 385 CETYGNVEMGEYV 397
C + G V
Sbjct: 362 CSCLKVINQGSEV 374
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 140/326 (42%), Gaps = 47/326 (14%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
F W+ +I Y+R R +L LM++ GVLPD + P +L+ +E GK +HS+
Sbjct: 147 FTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSV 206
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
+K+G+ + + +Y K GE A F + + +WN+V+ Q G +A
Sbjct: 207 VIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEA 266
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
+ + M + G +P VT WN L+
Sbjct: 267 VELVKEMEKEGISPGLVT-------------------------------------WNILI 289
Query: 249 DMYGKCGRMDLAYKVFATMD----ERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVR 304
Y + G+ D A + M+ +V +WT++I G +G +AL+ F M AGV
Sbjct: 290 GGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVV 349
Query: 305 PNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMK 364
PN VT + +SAC + +G + + G + +VD+ + G L++A K
Sbjct: 350 PNAVTIMSAVSACSCLKVINQGSEVHSIAVKM-GFIDDVLVGNSLVDMYSKCGKLEDARK 408
Query: 365 MVEEMPMKP----NSIVWG-CLMGAC 385
+ + + K NS++ G C G C
Sbjct: 409 VFDSVKNKDVYTWNSMITGYCQAGYC 434
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 135/335 (40%), Gaps = 60/335 (17%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
F W +I AL + M AGV+P+ T+ + A I G +VHS+
Sbjct: 318 FTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSI 377
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
VK+G + +++Y K G+ AR VFD + + +WN++I G Q G A
Sbjct: 378 AVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKA 437
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
+F M+ P +I+ WN+++
Sbjct: 438 YELFTRMQDANLRP-------------------------------------NIITWNTMI 460
Query: 249 DMYGKCGRMDLAYKVFATMD-----ERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGV 303
Y K G A +F M+ +RN ++W +I GY +G +EALE F M+ +
Sbjct: 461 SGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRF 520
Query: 304 RPNYVTFVGVLSACVH--GGKVQEGRCYFDMMKNVYGITPRLQH------YGCMVDLLGR 355
PN VT + +L AC + G K M++ ++G R + D +
Sbjct: 521 MPNSVTILSLLPACANLLGAK---------MVREIHGCVLRRNLDAIHAVKNALTDTYAK 571
Query: 356 AGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGN 390
+G ++ + + M K + I W L+G +G+
Sbjct: 572 SGDIEYSRTIFLGMETK-DIITWNSLIGGYVLHGS 605
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 6/222 (2%)
Query: 179 LSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAER 238
L + G +A + ++ + G T + L +C G + LG LH
Sbjct: 56 LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTE 112
Query: 239 TDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCM 298
D+ + L+ MY KCG + A KVF +M ERN+ +W+++I Y+ E + F M
Sbjct: 113 PDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLM 172
Query: 299 REAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGL 358
+ GV P+ F +L C + G V+ G+ ++ + G++ L+ ++ + + G
Sbjct: 173 MKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKL-GMSSCLRVSNSILAVYAKCGE 231
Query: 359 LDEAMKMVEEMPMKPNSIVW-GCLMGACETYGNVEMGEYVAK 399
LD A K M + + I W L+ C+ + E E V +
Sbjct: 232 LDFATKFFRRMRER-DVIAWNSVLLAYCQNGKHEEAVELVKE 272
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 167/326 (51%), Gaps = 4/326 (1%)
Query: 57 LRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQS 116
LR + +W +I +R A+ + + ML LP+ +T+ +LKA +
Sbjct: 238 LRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEE 297
Query: 117 FAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVI 176
A+ G+QVHSL VK ++T+ + T +++Y K GE + R VFD + +W ++I
Sbjct: 298 KALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSII 357
Query: 177 GGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAA 236
++ G +AI +F M+R + +T+VS+ ACGSVG L LG +LH + K +
Sbjct: 358 AAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQII--KNS 415
Query: 237 ERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFW 296
++ + ++LV +Y KCG A+ V + R+V SWT++I G + GH +EAL+
Sbjct: 416 IEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLK 475
Query: 297 CMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRA 356
M + GV PN T+ L AC + + GR + K + ++ ++ + +
Sbjct: 476 EMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVG-SALIHMYAKC 534
Query: 357 GLLDEAMKMVEEMPMKPNSIVWGCLM 382
G + EA ++ + MP K N + W ++
Sbjct: 535 GFVSEAFRVFDSMPEK-NLVSWKAMI 559
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 177/371 (47%), Gaps = 14/371 (3%)
Query: 40 LCNCTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGV 99
+ +C + L VYA + E N W +I Y + A L ++ G+
Sbjct: 124 ISSCVRLGDL--VYARKVFDSMPEKNTV--TWTAMIDGYLKYGLEDEAFALFEDYVKHGI 179
Query: 100 LPDRYTLPIVLKAVCQSFA-IELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSAR 158
+ + L +C A ELG+QVH VK+G+ N E+ + Y + GE TSA
Sbjct: 180 RFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSAL 238
Query: 159 MVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVG 218
FD + + SW AVI S+ G AI +F+ M H F P+ T+ S+ AC
Sbjct: 239 RAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEK 298
Query: 219 DLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSL 278
L+ G Q+H+ V K +TD+ + SL+DMY KCG + KVF M RN +WTS+
Sbjct: 299 ALRFGRQVHSLV--VKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSI 356
Query: 279 IVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGR-CYFDMMKNVY 337
I +A G EA+ F M+ + N +T V +L AC G + G+ + ++KN
Sbjct: 357 IAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKN-- 414
Query: 338 GITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGN-VEMGEY 396
I + +V L + G +A +++++P + + + W ++ C + G+ E ++
Sbjct: 415 SIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSR-DVVSWTAMISGCSSLGHESEALDF 473
Query: 397 VAKHLQ-ALEP 406
+ + +Q +EP
Sbjct: 474 LKEMIQEGVEP 484
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 128/254 (50%), Gaps = 2/254 (0%)
Query: 64 SNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGK 123
SN W +II + R A+ L +M R ++ + T+ +L+A A+ LGK
Sbjct: 346 SNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGK 405
Query: 124 QVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGG 183
++H+ +K ++ N Y + + LYCK GE A V + P + SW A+I G S G
Sbjct: 406 ELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLG 465
Query: 184 LARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILM 243
+A+ M + G P+ T S AC + L +G +H+ A +++ +
Sbjct: 466 HESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHAL--SNVFV 523
Query: 244 WNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGV 303
++L+ MY KCG + A++VF +M E+N+ SW ++I+GYA +G EAL+ + M G
Sbjct: 524 GSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGF 583
Query: 304 RPNYVTFVGVLSAC 317
+ F +LS C
Sbjct: 584 EVDDYIFATILSTC 597
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 129/285 (45%), Gaps = 6/285 (2%)
Query: 101 PDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMV 160
+R ++ + + S + L K++H++ +K Y I+ + G+ AR V
Sbjct: 80 SERVDYALLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKV 139
Query: 161 FDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTM-VSLTSACGSVGD 219
FD P+ +W A+I G + GL +A +F + +HG M V L + C +
Sbjct: 140 FDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAE 199
Query: 220 LQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLI 279
+LG Q+H + ++++ +SLV Y +CG + A + F M+E++V SWT++I
Sbjct: 200 FELGRQVHGNMVKVGVG---NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVI 256
Query: 280 VGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGI 339
+ GH +A+ F M PN T +L AC ++ GR ++
Sbjct: 257 SACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIK 316
Query: 340 TPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGA 384
T M D+ + G + + K+ + M + N++ W ++ A
Sbjct: 317 TDVFVGTSLM-DMYAKCGEISDCRKVFDGMSNR-NTVTWTSIIAA 359
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 74/148 (50%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+W +I + L AL M++ GV P+ +T LKA S ++ +G+ +HS+
Sbjct: 453 SWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIA 512
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
K +N + + I++Y K G + A VFD P+ L SW A+I G ++ G R+A+
Sbjct: 513 KKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREAL 572
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSV 217
++ M GF D ++ S CG +
Sbjct: 573 KLMYRMEAEGFEVDDYIFATILSTCGDI 600
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 9/164 (5%)
Query: 232 HAKAAERTD---ILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHV 288
HA A + D I N+L+ + G + A KVF +M E+N +WT++I GY +G
Sbjct: 105 HAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLE 164
Query: 289 NEALECFWCMREAGVR-PNYVTFVGVLSACVHGGKVQEGR-CYFDMMKNVYGITPRLQHY 346
+EA F + G+R N FV +L+ C + + GR + +M+K G L
Sbjct: 165 DEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG---NLIVE 221
Query: 347 GCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGN 390
+V + G L A++ + M K + I W ++ AC G+
Sbjct: 222 SSLVYFYAQCGELTSALRAFDMMEEK-DVISWTAVISACSRKGH 264
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 159/303 (52%), Gaps = 6/303 (1%)
Query: 144 FINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPD 203
I+ + KSG+F +A V + P+P SWN ++ G + +A F M G D
Sbjct: 260 LIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFD 319
Query: 204 GVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKV 263
++ + +A ++ + G +H C + K + +++ ++L+DMY KCG + A +
Sbjct: 320 EYSLSIVLAAVAALAVVPWGSLIHACAH--KLGLDSRVVVASALIDMYSKCGMLKHAELM 377
Query: 264 FATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMR-EAGVRPNYVTFVGVLSACVHGGK 322
F TM +N+ W +I GYA +G EA++ F ++ E ++P+ TF+ +L+ C H
Sbjct: 378 FWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEV 437
Query: 323 VQEGRC-YFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCL 381
E YF+MM N Y I P ++H ++ +G+ G + +A ++++E + + W L
Sbjct: 438 PMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRAL 497
Query: 382 MGACETYGNVEMGEYVAKHLQAL--EPWNDGAYVVLSNIYANKGMWKEVERIRSSMKEGR 439
+GAC +++ + VA + L ++ Y+V+SN+YA W+EV +IR M+E
Sbjct: 498 LGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESG 557
Query: 440 LAK 442
+ K
Sbjct: 558 VLK 560
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 150/347 (43%), Gaps = 45/347 (12%)
Query: 54 AHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAV 113
A R+H + S + +W+ I+ R LR V ++ G PD L +L+
Sbjct: 8 AFTTRSH-VGSTASSNSWSTIVPALARF-GSIGVLRAAVELINDGEKPDASPLVHLLRVS 65
Query: 114 CQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWN 173
+ L +Q+H K G +N + Y S A VFDE PDP + SWN
Sbjct: 66 GNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWN 125
Query: 174 AVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHA 233
+++ G Q G ++ I +F+ + R P+ + + +AC + LG +H+ +
Sbjct: 126 SLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKL 185
Query: 234 KAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALE 293
E+ ++++ N L+DMYGKCG MD A VF M+E++ SW +++
Sbjct: 186 -GLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIV-------------- 230
Query: 294 CFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLL 353
++C GK++ G +F M N P Y ++D
Sbjct: 231 ---------------------ASCSRNGKLELGLWFFHQMPN-----PDTVTYNELIDAF 264
Query: 354 GRAGLLDEAMKMVEEMPMKPNSIVWGCLM-GACETYGNVEMGEYVAK 399
++G + A +++ +MP PNS W ++ G + + E E+ K
Sbjct: 265 VKSGDFNNAFQVLSDMP-NPNSSSWNTILTGYVNSEKSGEATEFFTK 310
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 133/342 (38%), Gaps = 74/342 (21%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQ 124
+P +WN+++ Y + + + L + + R+ V P+ ++ L A + LG
Sbjct: 118 DPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGAC 177
Query: 125 VHSLGVKIGLQT-NEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGG 183
+HS VK+GL+ N I++Y K G
Sbjct: 178 IHSKLVKLGLEKGNVVVGNCLIDMYGKCG------------------------------- 206
Query: 184 LARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILM 243
DA+ VF +M D V+ ++ ++C G L+LGL +H D +
Sbjct: 207 FMDDAVLVFQHMEE----KDTVSWNAIVASCSRNGKLELGLWF----FHQ--MPNPDTVT 256
Query: 244 WNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGV 303
+N L+D + K G + A++V + M N SSW +++ GY EA E F M +GV
Sbjct: 257 YNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGV 316
Query: 304 RPNYVTFV---------------GVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGC 348
R + + ++ AC H G+ R+
Sbjct: 317 RFDEYSLSIVLAAVAALAVVPWGSLIHACAHK----------------LGLDSRVVVASA 360
Query: 349 MVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGN 390
++D+ + G+L A M MP K N IVW ++ G+
Sbjct: 361 LIDMYSKCGMLKHAELMFWTMPRK-NLIVWNEMISGYARNGD 401
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQ 124
NP +WN I+ Y E A M +GV D Y+L IVL AV + G
Sbjct: 282 NPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSL 341
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGL 184
+H+ K+GL + + I++Y K G A ++F P L WN +I G ++ G
Sbjct: 342 IHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGD 401
Query: 185 ARDAIRVFVNMRRHGF-APDGVTMVSLTSAC 214
+ +AI++F +++ F PD T ++L + C
Sbjct: 402 SIEAIKLFNQLKQERFLKPDRFTFLNLLAVC 432
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 152/319 (47%), Gaps = 45/319 (14%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVC----QSFAIELGKQV 125
+WN ++ Y + +ALRL MLR GV P+ T IV+ A S L K +
Sbjct: 231 SWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLI 290
Query: 126 HSLGVKI----------------------------GLQTNEYCETGFINLYCKSGEFTSA 157
V++ G Q N I+ Y + G+ +SA
Sbjct: 291 DEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSA 350
Query: 158 RMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFA-PDGVTMVSLTSACGS 216
R +FD P + SWN++I G + G A AI F +M +G + PD VTM+S+ SACG
Sbjct: 351 RQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGH 410
Query: 217 VGDLQLGLQLHTCV--YHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSS 274
+ DL+LG C+ Y K + + + SL+ MY + G + A +VF M ER+V S
Sbjct: 411 MADLELG----DCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVS 466
Query: 275 WTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMK 334
+ +L +A +G E L M++ G+ P+ VT+ VL+AC G ++EG+ F ++
Sbjct: 467 YNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIR 526
Query: 335 NVYGITPRLQHYGCMVDLL 353
N P HY CM DLL
Sbjct: 527 N-----PLADHYACM-DLL 539
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 197/461 (42%), Gaps = 93/461 (20%)
Query: 66 PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLP----------IVLKAVCQ 115
P F N++ + +++++ + LRL+ R G++PD ++ P I+ +A+ +
Sbjct: 69 PNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQALVE 128
Query: 116 SF--------------------AIELGKQV-HSLGVKIGLQTN-------------EYCE 141
++E ++V + + G N E C+
Sbjct: 129 KLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACK 188
Query: 142 -------------TGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDA 188
T I + K + +AR FD P+ + SWNA++ G +Q G DA
Sbjct: 189 LFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDA 248
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLG----------------------LQL 226
+R+F +M R G P+ T V + SAC D L L +
Sbjct: 249 LRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDM 308
Query: 227 HTCVYHAKAAERT--------DILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSL 278
H ++A R +++ WN+++ Y + G M A ++F TM +RNV SW SL
Sbjct: 309 HAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSL 368
Query: 279 IVGYAMHGHVNEALECFWCMREAG-VRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVY 337
I GYA +G A+E F M + G +P+ VT + VLSAC H ++ G C D ++
Sbjct: 369 IAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRK-N 427
Query: 338 GITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLMGACETYGN-VEMGEY 396
I Y ++ + R G L EA ++ +EM + + + + L A G+ VE
Sbjct: 428 QIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER-DVVSYNTLFTAFAANGDGVETLNL 486
Query: 397 VAK-HLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMK 436
++K + +EP + Y + G+ KE +RI S++
Sbjct: 487 LSKMKDEGIEP-DRVTYTSVLTACNRAGLLKEGQRIFKSIR 526
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 105/245 (42%), Gaps = 19/245 (7%)
Query: 158 RMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSV 217
R++FD P + N++ S+ +A D +R++ R G PD + + + G
Sbjct: 60 RLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRF 119
Query: 218 GDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTS 277
G L L + D + N ++DMY K ++ A KVF + +R S W
Sbjct: 120 GILFQALVEKLGFFK-------DPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNV 172
Query: 278 LIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVY 337
+I GY G+ EA + F M E V V++ +++ ++ R YFD M
Sbjct: 173 MISGYWKWGNKEEACKLFDMMPENDV----VSWTVMITGFAKVKDLENARKYFDRMPEKS 228
Query: 338 GITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM---PMKPNSIVWGCLMGACETYGNVEMG 394
++ + M+ + G ++A+++ +M ++PN W ++ AC + +
Sbjct: 229 VVS-----WNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLT 283
Query: 395 EYVAK 399
+ K
Sbjct: 284 RSLVK 288
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 136/297 (45%), Gaps = 4/297 (1%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLG 129
+W ++ Y ALR V M + G PD T+ VL + AI+ GK++H
Sbjct: 385 SWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYA 444
Query: 130 VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAI 189
+K N T + +Y K G +FD + +W A+I + R I
Sbjct: 445 LKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGI 504
Query: 190 RVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNS-LV 248
VF M PD VTM + + C + L+LG +LH H E I ++ ++
Sbjct: 505 EVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHG---HILKKEFESIPFVSARII 561
Query: 249 DMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYV 308
MYGKCG + A F + + +WT++I Y + +A+ CF M G PN
Sbjct: 562 KMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTF 621
Query: 309 TFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKM 365
TF VLS C G V E +F++M +Y + P +HY +++LL R G ++EA ++
Sbjct: 622 TFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 162/335 (48%), Gaps = 16/335 (4%)
Query: 69 FNWNNIIRCYTRLEAPR--NALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVH 126
++WN ++R R + L M GV + Y+L V K+ + A+ G + H
Sbjct: 178 YSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTH 237
Query: 127 SLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLAR 186
+L +K GL + + +T +++Y K G+ AR VFDE + + W A+I GL+
Sbjct: 238 ALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQW 297
Query: 187 DAIRVFVNM-RRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWN 245
+A+ +F M P+ V + ++ G V L+LG ++H V +K + +
Sbjct: 298 EALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQP-FVHS 356
Query: 246 SLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRP 305
L+D+Y KCG M +VF +RN SWT+L+ GYA +G ++AL M++ G RP
Sbjct: 357 GLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRP 416
Query: 306 NYVTFVGVLSACVHGGKVQEGR---CYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEA 362
+ VT VL C +++G+ CY +KN++ P + ++ + + G+ +
Sbjct: 417 DVVTIATVLPVCAELRAIKQGKEIHCY--ALKNLF--LPNVSLVTSLMVMYSKCGVPEYP 472
Query: 363 MKMVEEMPMKPNSIVW----GCLMGACETYGNVEM 393
+++ + + + N W C + C+ +E+
Sbjct: 473 IRLFDRLEQR-NVKAWTAMIDCYVENCDLRAGIEV 506
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 153/332 (46%), Gaps = 10/332 (3%)
Query: 68 PFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHS 127
P+ + I+ + R AL + + + G+ + T +L+A + ++ GKQVH
Sbjct: 76 PYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVH- 134
Query: 128 LGVKI-GLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLAR 186
+ ++I GL++NE+ T +++Y G A+ VFDE+ + SWNA++ G G R
Sbjct: 135 VHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKR 194
Query: 187 --DAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMW 244
D + F MR G + ++ ++ + L+ GL+ H K + +
Sbjct: 195 YQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAI--KNGLFNSVFLK 252
Query: 245 NSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCM-REAGV 303
SLVDMY KCG++ LA +VF + ER++ W ++I G A + EAL F M E +
Sbjct: 253 TSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKI 312
Query: 304 RPNYVTFVGVLSACVHGGKVQEGR-CYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEA 362
PN V +L ++ G+ + ++K+ + H G ++DL + G +
Sbjct: 313 YPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSG-LIDLYCKCGDMASG 371
Query: 363 MKMVEEMPMKPNSIVWGCLMGACETYGNVEMG 394
++ + N+I W LM G +
Sbjct: 372 RRVFYGSKQR-NAISWTALMSGYAANGRFDQA 402
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 115/220 (52%), Gaps = 2/220 (0%)
Query: 186 RDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWN 245
R+A+ V + G+A D + ++ L CG L+ +H C+ + D+ N
Sbjct: 101 REAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSP--CDVGARN 158
Query: 246 SLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRP 305
++++MY C +D A KVF M E N + ++ + +G+ EA++ F +E G +P
Sbjct: 159 AIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKP 218
Query: 306 NYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKM 365
N F V S C G V+EG F M YGI P ++HY + +L +G LDEA+
Sbjct: 219 NGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNF 278
Query: 366 VEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALE 405
VE MPM+P+ VW LM +G+VE+G+ A+ ++ L+
Sbjct: 279 VERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLD 318
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 110/207 (53%), Gaps = 2/207 (0%)
Query: 200 FAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDL 259
+ D ++ L CG LQ +H + + + D+ + L++MY CG +
Sbjct: 250 YVVDLSRLLRLAKICGEAEGLQEAKTVHGKI--SASVSHLDLSSNHVLLEMYSNCGLANE 307
Query: 260 AYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVH 319
A VF M E+N+ +W +I +A +G +A++ F +E G P+ F G+ AC
Sbjct: 308 AASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGM 367
Query: 320 GGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWG 379
G V EG +F+ M YGI P ++ Y +V++ G LDEA++ VE MPM+PN VW
Sbjct: 368 LGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWE 427
Query: 380 CLMGACETYGNVEMGEYVAKHLQALEP 406
LM +GN+E+G+Y A+ ++ L+P
Sbjct: 428 TLMNLSRVHGNLELGDYCAEVVEFLDP 454
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 2/146 (1%)
Query: 144 FINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPD 203
+ +Y G A VF++ + L +W +I ++ G DAI +F + G PD
Sbjct: 295 LLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPD 354
Query: 204 GVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKV 263
G + ACG +GD+ GL LH I + SLV+MY G +D A +
Sbjct: 355 GQLFRGIFYACGMLGDVDEGL-LHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEF 413
Query: 264 FATMD-ERNVSSWTSLIVGYAMHGHV 288
M E NV W +L+ +HG++
Sbjct: 414 VERMPMEPNVDVWETLMNLSRVHGNL 439
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 124/228 (54%), Gaps = 6/228 (2%)
Query: 179 LSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAER 238
L Q L +DAI + G PD V L +C ++ L+ ++H +K R
Sbjct: 215 LCQRRLYKDAIELLDK----GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKF--R 268
Query: 239 TDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCM 298
D + N ++ M+G+C + A +VF M ++++ SW ++ Y+ +G ++AL F M
Sbjct: 269 GDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEM 328
Query: 299 REAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGL 358
+ G++PN TF+ V AC G ++E +FD MKN +GI+P+ +HY ++ +LG+ G
Sbjct: 329 TKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGH 388
Query: 359 LDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALEP 406
L EA + + ++P +P + W + +G++++ +Y+ + + ++P
Sbjct: 389 LVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDP 436
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 91/199 (45%), Gaps = 2/199 (1%)
Query: 92 VLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKS 151
+ +L G +PDR ++ ++ ++E K+VH ++ + + I+++ +
Sbjct: 225 IELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGEC 284
Query: 152 GEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLT 211
T A+ VFD D + SW+ ++ S G+ DA+ +F M +HG P+ T +++
Sbjct: 285 SSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVF 344
Query: 212 SACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERN 271
AC +VG ++ LH + + ++ + GKCG + A + +
Sbjct: 345 LACATVGGIEEAF-LHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEP 403
Query: 272 VSSWTSLIVGYA-MHGHVN 289
+ + + YA +HG ++
Sbjct: 404 TADFWEAMRNYARLHGDID 422
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 115/223 (51%), Gaps = 4/223 (1%)
Query: 183 GLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDIL 242
G + A+ + + R G+ D + + CG LQ +H + + +DI
Sbjct: 160 GKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGI--SDIS 217
Query: 243 MWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAG 302
+NS+++MY CG ++ A VF +M ERN+ +W +I +A +G +A++ F ++ G
Sbjct: 218 AYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEG 277
Query: 303 VRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEA 362
+P+ F + AC G + EG +F+ M YGI P ++HY +V +L G LDEA
Sbjct: 278 NKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEA 337
Query: 363 MKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALE 405
++ VE M+PN +W LM +G++ +G+ ++ L+
Sbjct: 338 LRFVE--SMEPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLD 378
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 2/144 (1%)
Query: 145 INLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDG 204
I +Y G A VF+ P+ L +W VI ++ G DAI F ++ G PDG
Sbjct: 223 IEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDG 282
Query: 205 VTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVF 264
+ ACG +GD+ GL LH + + + + SLV M + G +D A +
Sbjct: 283 EMFKEIFFACGVLGDMNEGL-LHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFV 341
Query: 265 ATMDERNVSSWTSLIVGYAMHGHV 288
+M E NV W +L+ +HG +
Sbjct: 342 ESM-EPNVDLWETLMNLSRVHGDL 364
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 6/220 (2%)
Query: 186 RDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWN 245
R+A+ V + G+ D ++ L CG V L+ +H C+ A ++
Sbjct: 94 REALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITPLDARS------YH 147
Query: 246 SLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRP 305
++++MY C D A VF M +RN +W ++I A +G A++ F E G +P
Sbjct: 148 TVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKP 207
Query: 306 NYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKM 365
+ F V ACV G + EG +F+ M YG+ ++ Y ++++L G LDEA+
Sbjct: 208 DKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDF 267
Query: 366 VEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQALE 405
VE M ++P+ +W LM C G +E+G+ A+ ++ L+
Sbjct: 268 VERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLD 307
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 181/402 (45%), Gaps = 21/402 (5%)
Query: 66 PAPFNWNNIIRCYTRLEAPRN---ALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELG 122
P ++N ++ R + RN A + ML + V P+ +T I+++ C + I++
Sbjct: 167 PGVLSYNAVLDATIR--SKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVA 224
Query: 123 KQVHSLGVKIGLQTNEYCETGFINLYCK----SGEFTSARMVFDENPDPKLGSWNAVIGG 178
+ G N I+ YCK F R + + +P L S+N VI G
Sbjct: 225 LTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVING 284
Query: 179 LSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAER 238
L + G ++ V M R G++ D VT +L G+ L +H + +
Sbjct: 285 LCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML--RHGLT 342
Query: 239 TDILMWNSLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLIVGYAMHGHVNEALEC 294
++ + SL+ K G M+ A + M R N ++T+L+ G++ G++NEA
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 295 FWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLG 354
M + G P+ VT+ +++ GK+++ + MK G++P + Y ++
Sbjct: 403 LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE-KGLSPDVVSYSTVLSGFC 461
Query: 355 RAGLLDEAMKMVEEMP---MKPNSIVWGCLM-GACETYGNVEMGEYVAKHLQALEPWNDG 410
R+ +DEA+++ EM +KP++I + L+ G CE E + + L+ P ++
Sbjct: 462 RSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF 521
Query: 411 AYVVLSNIYANKGMWKEVERIRSSMKE-GRLAKVPAYSLTTN 451
Y L N Y +G ++ ++ + M E G L V YS+ N
Sbjct: 522 TYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLIN 563
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 121/268 (45%), Gaps = 16/268 (5%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
+N +I+ Y + AL +H MLR G+ P T ++ ++C++ + +
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPD----PKLGSWNAVIGGLSQGGLAR 186
GL NE T ++ + + G A V E D P + ++NA+I G G
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 187 DAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNS 246
DAI V +M+ G +PD V+ ++ S D+ L++ + + + D + ++S
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM--VEKGIKPDTITYSS 490
Query: 247 LVDMYGKCGRMDLAYKVFATM-------DERNVSSWTSLIVGYAMHGHVNEALECFWCMR 299
L+ + + R A ++ M DE ++T+LI Y M G + +AL+ M
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDE---FTYTALINAYCMEGDLEKALQLHNEMV 547
Query: 300 EAGVRPNYVTFVGVLSACVHGGKVQEGR 327
E GV P+ VT+ +++ + +E +
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQSRTREAK 575
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 118/269 (43%), Gaps = 30/269 (11%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQ 124
+P +++ ++ + R ALR+ M+ G+ PD T +++ C+ +
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPD----PKLGSWNAVIGGLS 180
++ +++GL +E+ T IN YC G+ A + +E + P + +++ +I GL+
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566
Query: 181 QGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTD 240
+ R+A R+ + + P VT +L C ++ + + V
Sbjct: 567 KQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNI-------EFKSVV---------- 609
Query: 241 ILMWNSLVDMYGKCGRMDLAYKVFATMDERNV----SSWTSLIVGYAMHGHVNEALECFW 296
SL+ + G M A +VF +M +N +++ +I G+ G + +A +
Sbjct: 610 -----SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYK 664
Query: 297 CMREAGVRPNYVTFVGVLSACVHGGKVQE 325
M ++G + VT + ++ A GKV E
Sbjct: 665 EMVKSGFLLHTVTVIALVKALHKEGKVNE 693
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 130/278 (46%), Gaps = 13/278 (4%)
Query: 94 MLRAGVLPDRYTLPIVLKAVCQSFAI-ELGKQVHSLGVKIGLQTNEYCETGFINLYCKSG 152
M R GV PDR T +L AVC + E + + ++ + + ++ CK G
Sbjct: 330 MQRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGG 388
Query: 153 EFTSARMVFDENPD----PKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMV 208
+ A + + P P + S++ VI G ++ G +A+ +F MR G A D V+
Sbjct: 389 QMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYN 448
Query: 209 SLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMD 268
+L S VG + L + + A + D++ +N+L+ YGK G+ D KVF M
Sbjct: 449 TLLSIYTKVGRSEEALDILREM--ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Query: 269 ER----NVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQ 324
N+ ++++LI GY+ G EA+E F + AG+R + V + ++ A G V
Sbjct: 507 REHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVG 566
Query: 325 EGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEA 362
D M GI+P + Y ++D GR+ +D +
Sbjct: 567 SAVSLIDEMTK-EGISPNVVTYNSIIDAFGRSATMDRS 603
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 132/276 (47%), Gaps = 15/276 (5%)
Query: 119 IELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPD----PKLGSWNA 174
+ + K++ G Y + I+ Y +SG A VF+ + P L ++NA
Sbjct: 249 VTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNA 308
Query: 175 VIGGLSQGGLA-RDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHA 233
VI +GG+ + + F M+R+G PD +T SL + C G + L + +
Sbjct: 309 VIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNR 368
Query: 234 KAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLIVGYAMHGHVN 289
+ + D+ +N+L+D K G+MDLA+++ A M + NV S++++I G+A G +
Sbjct: 369 RIEQ--DVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFD 426
Query: 290 EALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCM 349
EAL F MR G+ + V++ +LS G+ +E M +V GI + Y +
Sbjct: 427 EALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV-GIKKDVVTYNAL 485
Query: 350 VDLLGRAGLLDEAMKMVEEMPMK---PNSIVWGCLM 382
+ G+ G DE K+ EM + PN + + L+
Sbjct: 486 LGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLI 521
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 69/130 (53%), Gaps = 6/130 (4%)
Query: 245 NSLVDMYGKCGRMDLAYKVFATMDE----RNVSSWTSLIVGYAMHGHVNEALECFWCMRE 300
++++ G+ G++ +A ++F T V ++++LI Y G EA+ F M+E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 301 AGVRPNYVTFVGVLSACVHGG-KVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLL 359
G+RPN VT+ V+ AC GG + ++ +FD M+ G+ P + ++ + R GL
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQR-NGVQPDRITFNSLLAVCSRGGLW 355
Query: 360 DEAMKMVEEM 369
+ A + +EM
Sbjct: 356 EAARNLFDEM 365
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 150/334 (44%), Gaps = 17/334 (5%)
Query: 66 PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQV 125
P+ +N ++ ++ + L M G+ D YT I + C+ + L V
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPD----PKLGSWNAVIGGLSQ 181
+ +K+G + + + +N YC S + A + D+ + P ++ +I GL
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 182 GGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI 241
A +A+ + M + G PD VT ++ + GD+ L L L + K D+
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKI--EADV 258
Query: 242 LMWNSLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLIVGYAMHGHVNEALECFWC 297
+++N+++D K MD A +F MD + +V +++SLI +G ++A
Sbjct: 259 VIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 318
Query: 298 MREAGVRPNYVTFVGVLSACVHGGKVQEG-RCYFDMMKNVYGITPRLQHYGCMVDLLGRA 356
M E + PN VTF ++ A V GK+ E + Y +M+K I P + Y +++
Sbjct: 319 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR--SIDPDIFTYSSLINGFCMH 376
Query: 357 GLLDEAMKMVEEMPMK---PNSIVWGCLM-GACE 386
LDEA M E M K PN + + L+ G C+
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 167/386 (43%), Gaps = 19/386 (4%)
Query: 66 PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQV 125
P F + +I A+ L M++ G PD T V+ +C+ I+L +
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPD----PKLGSWNAVIGGLSQ 181
K ++ + I+ CK A +F E + P + +++++I L
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 305
Query: 182 GGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI 241
G DA R+ +M P+ VT +L A G L +L+ + K + DI
Sbjct: 306 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM--IKRSIDPDI 363
Query: 242 LMWNSLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLIVGYAMHGHVNEALECFWC 297
++SL++ + R+D A +F M + NV ++++LI G+ V E +E F
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423
Query: 298 MREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAG 357
M + G+ N VT+ ++ + F M +V G+ P + Y ++D L + G
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV-GVHPNILTYNILLDGLCKNG 482
Query: 358 LLDEAMKMVEEM---PMKPNSIVWGCLM-GACETYGNVEMG--EYVAKHLQALEPWNDGA 411
L +AM + E + M+P+ + ++ G C+ G VE G + L+ + P N A
Sbjct: 483 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA-GKVEDGWELFCNLSLKGVSP-NVIA 540
Query: 412 YVVLSNIYANKGMWKEVERIRSSMKE 437
Y + + + KG +E + + MKE
Sbjct: 541 YNTMISGFCRKGSKEEADSLLKKMKE 566
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 121/299 (40%), Gaps = 53/299 (17%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQ 124
+P F ++++I + + A + LM+ P+ T ++K C++ +E G +
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDE----NPDPKLGSWNAVIGGLS 180
+ + GL N T I+ + ++ + +A+MVF + P + ++N ++ GL
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 181 QGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTD 240
+ G A+ VF ++R PD
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPD------------------------------------- 502
Query: 241 ILMWNSLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLIVGYAMHGHVNEALECFW 296
I +N +++ K G+++ +++F + + NV ++ ++I G+ G EA
Sbjct: 503 IYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLK 562
Query: 297 CMREAGVRPNYVTFVGVLSACVHGGK-------VQEGR-CYFDMMKNVYGITPRLQHYG 347
M+E G PN T+ ++ A + G ++E R C F + G+ + H G
Sbjct: 563 KMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 621
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 120/264 (45%), Gaps = 17/264 (6%)
Query: 133 GLQTNEYCETGFINLYCKSGEFTSARMVFDENPD----PKLGSWNAVIGGLSQGGLARDA 188
G + Y T I+ + SG + A VF + + P L ++N ++ + G +
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 189 IRVFV-NMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERT-DILMWNS 246
I V M+ G APD T +L + C Q Q+ KAA + D + +N+
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFE---EMKAAGFSYDKVTYNA 319
Query: 247 LVDMYGKCGRMDLAYKVFATMD----ERNVSSWTSLIVGYAMHGHVNEALECFWCMREAG 302
L+D+YGK R A KV M ++ ++ SLI YA G ++EA+E M E G
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Query: 303 VRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEA 362
+P+ T+ +LS GKV+ F+ M+N G P + + + + G G E
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA-GCKPNICTFNAFIKMYGNRGKFTEM 438
Query: 363 MKMVEEMP---MKPNSIVWGCLMG 383
MK+ +E+ + P+ + W L+
Sbjct: 439 MKIFDEINVCGLSPDIVTWNTLLA 462
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 133/329 (40%), Gaps = 14/329 (4%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQ 124
+P+ +N++I Y R A+ L M G PD +T +L ++ +E
Sbjct: 346 SPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMS 405
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDE----NPDPKLGSWNAVIGGLS 180
+ G + N FI +Y G+FT +FDE P + +WN ++
Sbjct: 406 IFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG 465
Query: 181 QGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTD 240
Q G+ + VF M+R GF P+ T +L SA G + + ++ + A D
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVT--PD 523
Query: 241 ILMWNSLVDMYGKCGRMDLAYKVFATMDE----RNVSSWTSLIVGYAMHGHVNEALECFW 296
+ +N+++ + G + + KV A M++ N ++ SL+ YA +
Sbjct: 524 LSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAE 583
Query: 297 CMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRA 356
+ + P V ++ C + E F +K G +P + MV + GR
Sbjct: 584 EVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKE-RGFSPDITTLNSMVSIYGRR 642
Query: 357 GLLDEA---MKMVEEMPMKPNSIVWGCLM 382
++ +A + ++E P+ + LM
Sbjct: 643 QMVAKANGVLDYMKERGFTPSMATYNSLM 671
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 142/331 (42%), Gaps = 16/331 (4%)
Query: 48 QLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLP 107
+++ V+ + R F+ P +N +I Y+R + A+ ++ ML AGV PD T
Sbjct: 472 EVSGVFKEMKRAGFV---PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYN 528
Query: 108 IVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEF----TSARMVFDE 163
VL A+ + E ++V + + NE ++ Y E + A V+
Sbjct: 529 TVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSG 588
Query: 164 NPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLG 223
+P+ ++ S+ L +A R F ++ GF+PD T+ S+ S G Q+
Sbjct: 589 VIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGR---RQMV 645
Query: 224 LQLHTCVYHAKAAERT-DILMWNSLVDMYGKCGRM----DLAYKVFATMDERNVSSWTSL 278
+ + + + K T + +NSL+ M+ + ++ ++ A + ++ S+ ++
Sbjct: 646 AKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTV 705
Query: 279 IVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYG 338
I Y + + +A F MR +G+ P+ +T+ + + +E M +G
Sbjct: 706 IYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK-HG 764
Query: 339 ITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
P Y +VD + DEA VE++
Sbjct: 765 CRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 101/448 (22%), Positives = 192/448 (42%), Gaps = 52/448 (11%)
Query: 44 THIHQLNQVYAHILRTHFLESNPAP--FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLP 101
T + + A L + ++S P P ++N ++ +L+ + L M G+
Sbjct: 59 TRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN 118
Query: 102 DRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVF 161
D YT IV+ C F + L + +K+G + + +N +C+ + A +
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 162 DENPD----PKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSA-CGS 216
D+ + P + ++NA+I L + DA F + R G P+ VT +L + C S
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 217 ---------VGDL----------QLGLQLHTCVYHAKAAERT-------------DILMW 244
+ D+ L V + K E DI+ +
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298
Query: 245 NSLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLIVGYAMHGHVNEALECFWCMRE 300
+SL++ R+D A ++F M + +V S+ +LI G+ V + ++ F M +
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 301 AGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLD 360
G+ N VT+ ++ G V + + +F M + +GI+P + Y ++ L G L+
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM-DFFGISPDIWTYNILLGGLCDNGELE 417
Query: 361 EAMKMVEEM---PMKPNSIVWGCLM-GACETYGNVEMG--EYVAKHLQALEPWNDGAYVV 414
+A+ + E+M M + + + ++ G C+T G VE + + L+ L+P + Y
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMCKT-GKVEEAWSLFCSLSLKGLKP-DIVTYTT 475
Query: 415 LSNIYANKGMWKEVERIRSSMKEGRLAK 442
+ + KG+ EVE + + MK+ L K
Sbjct: 476 MMSGLCTKGLLHEVEALYTKMKQEGLMK 503
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 144/328 (43%), Gaps = 22/328 (6%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVC----QSFAIELGKQV 125
++ +I + +L+ NA + M++ G+ PD ++ A C AI+ K++
Sbjct: 521 TYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM 580
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPD----PKLGSWNAVIGGLSQ 181
L + +T I+ Y KSG+ + VFD P + ++N +I GL +
Sbjct: 581 QKLRHRPTTRTF----MPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVE 636
Query: 182 GGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI 241
A+ + M G + + T + SVGD + T + + DI
Sbjct: 637 KRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNE--GLDVDI 694
Query: 242 LMWNSLVDMYGKCGRMDLAYKVFATMDERNVSS----WTSLIVGYAMHGHVNEALECFWC 297
+ +L+ K GRM A V M RN+ + LI G+A G V EA +
Sbjct: 695 FTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQ 754
Query: 298 MREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAG 357
M++ GV+P+ T+ +SAC G + + M+ + G+ P ++ Y ++ RA
Sbjct: 755 MKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL-GVKPNIKTYTTLIKGWARAS 813
Query: 358 LLDEAMKMVEEMP---MKPNSIVWGCLM 382
L ++A+ EEM +KP+ V+ CL+
Sbjct: 814 LPEKALSCYEEMKAMGIKPDKAVYHCLL 841
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 126/299 (42%), Gaps = 16/299 (5%)
Query: 116 SFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAV 175
S A+E+ + + GVK L+T GF+ L + F + E P + +N +
Sbjct: 501 SKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNI 560
Query: 176 IGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKA 235
I G AI+ M++ P T + + GD++ L++ +
Sbjct: 561 ISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGC 620
Query: 236 AERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVS----SWTSLIVGYAMHGHVNEA 291
+ +N L++ + +M+ A ++ M VS ++T ++ GYA G +A
Sbjct: 621 V--PTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKA 678
Query: 292 LECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMM--KNVYGITPRLQH-YGC 348
E F ++ G+ + T+ +L AC G++Q M +N+ PR Y
Sbjct: 679 FEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNI----PRNSFVYNI 734
Query: 349 MVDLLGRAGLLDEAMKMVEEMP---MKPNSIVWGCLMGACETYGNVEMGEYVAKHLQAL 404
++D R G + EA ++++M +KP+ + + AC G++ + ++AL
Sbjct: 735 LIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL 793
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 119/299 (39%), Gaps = 14/299 (4%)
Query: 62 LESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIEL 121
L P + II Y + R +L + +M R G +P +T ++ + + +E
Sbjct: 583 LRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEK 642
Query: 122 GKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVF----DENPDPKLGSWNAVIG 177
++ G+ NE+ T + Y G+ A F +E D + ++ A++
Sbjct: 643 AVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLK 702
Query: 178 GLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAE 237
+ G + A+ V M + L GD+ L + K
Sbjct: 703 ACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM--KKEGV 760
Query: 238 RTDILMWNSLVDMYGKCGRMDLAYKVFATMD----ERNVSSWTSLIVGYAMHGHVNEALE 293
+ DI + S + K G M+ A + M+ + N+ ++T+LI G+A +AL
Sbjct: 761 KPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALS 820
Query: 294 CFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDL 352
C+ M+ G++P+ + +L++ + + E Y +M I + G +VD+
Sbjct: 821 CYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMT----ICKEMVEAGLIVDM 875
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 16/217 (7%)
Query: 247 LVDMYGKCGRMDLAYKVFATMDERNVSS----WTSLIVGYAMHGHVNEALECFWCMREAG 302
+V YG+ G M A + F M R ++ +TSLI YA+ ++EAL C M+E G
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 303 VRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVY-----GITPRLQHYGCMVDLLGRAG 357
+ + VT+ ++ G + +FD K ++ I ++ + C + RA
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 434
Query: 358 LLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQ--ALEPWNDGAYVVL 415
L ++ +EE + ++ +M + + G V K L+ P Y L
Sbjct: 435 AL---VREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTP-TVVTYGCL 490
Query: 416 SNIYANKG-MWKEVERIRSSMKEGRLAKVPAYSLTTN 451
N+Y G + K +E R +EG + YS+ N
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMIN 527
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 179/413 (43%), Gaps = 67/413 (16%)
Query: 93 LMLRAGVLPDRYTLPIVLKAVCQ----SFAIELGKQVHSLGVKIGLQTNEYCETGFINLY 148
+M G+LP+ +T ++ + + A+EL + SLGVK Y FI+ Y
Sbjct: 388 VMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVK----PTAYTYIVFIDYY 443
Query: 149 CKSGEFTSARMVFDENPD----PKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDG 204
KSG+ SA F++ P + + NA + L++ G R+A ++F ++ G PD
Sbjct: 444 GKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDS 503
Query: 205 VTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVF 264
VT + VG++ ++L + + D+++ NSL++ K R+D A+K+F
Sbjct: 504 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGC--EPDVIVVNSLINTLYKADRVDEAWKMF 561
Query: 265 ATMDERN----VSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTF---------- 310
M E V ++ +L+ G +G + EA+E F M + G PN +TF
Sbjct: 562 MRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKN 621
Query: 311 ---------------VG----------VLSACVHGGKVQEGRCYFDMMKNVYGITPRLQH 345
+G ++ V G+V+E C+F MK + + P
Sbjct: 622 DEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL--VYPDFVT 679
Query: 346 YGCMVDLLGRAGLLDEAMKMVEEM----PMKPNSIVWGCLMGACETYGNVEMGEYVAKHL 401
++ + +A L+++A K++ +P ++ W L+G+ ++ ++ L
Sbjct: 680 LCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERL 739
Query: 402 QALEPWNDGAYVVLSNI-YANK-----GMWKEVERIRSSMKEGRLAKVPAYSL 448
A DG +++ I Y+ K G E+ + G K+P Y+L
Sbjct: 740 VANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDL--GVQPKLPTYNL 790
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 148/338 (43%), Gaps = 25/338 (7%)
Query: 98 GVLPDRYTLPIVLKAVCQSFAIELGK----QVHSLGVKIGLQTNEYCETGFINLYCKSGE 153
GV P T +++ + ++ IE+ + QV S G + T + ++ Y KSG+
Sbjct: 780 GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNF----LLDAYGKSGK 835
Query: 154 FTSARMVFDENP----DPKLGSWNAVIGGLSQGGLARDAIRVFVN-MRRHGFAPDGVTMV 208
++ E + + N VI GL + G DA+ ++ + M F+P T
Sbjct: 836 IDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYG 895
Query: 209 SLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMD 268
L G L QL + R + ++N L++ +GK G D A +F M
Sbjct: 896 PLIDGLSKSGRLYEAKQLFEGMLDYGC--RPNCAIYNILINGFGKAGEADAACALFKRMV 953
Query: 269 ERNV----SSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQ 324
+ V +++ L+ M G V+E L F ++E+G+ P+ V + +++ +++
Sbjct: 954 KEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLE 1013
Query: 325 EGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMP---MKPNSIVWGCL 381
E F+ MK GITP L Y ++ LG AG+++EA K+ E+ ++PN + L
Sbjct: 1014 EALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNAL 1073
Query: 382 MGACETYGNVEMGEYVAKHL--QALEPWNDGAYVVLSN 417
+ G E V + + P N G Y L N
Sbjct: 1074 IRGYSLSGKPEHAYAVYQTMVTGGFSP-NTGTYEQLPN 1110
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 131/328 (39%), Gaps = 56/328 (17%)
Query: 134 LQTNEYCETG------FINLYCKSGEFTSARMVF-----DENPDPKLGSWNAVIGGLSQG 182
L N C G I CK + AR +F D PKL ++N +IGGL +
Sbjct: 739 LVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEA 798
Query: 183 GLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQL------HTC----VYH 232
+ A VF+ ++ G PD T L A G G + +L H C + H
Sbjct: 799 DMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITH 858
Query: 233 -------AKAAERTDIL-----------------MWNSLVDMYGKCGRMDLAYKVFATMD 268
KA D L + L+D K GR+ A ++F M
Sbjct: 859 NIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGML 918
Query: 269 ER----NVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQ 324
+ N + + LI G+ G + A F M + GVRP+ T+ ++ G+V
Sbjct: 919 DYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVD 978
Query: 325 EGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMP----MKPNSIVWGC 380
EG YF +K G+ P + Y +++ LG++ L+EA+ + EM + P+ +
Sbjct: 979 EGLHYFKELKES-GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNS 1037
Query: 381 LMGACETYGNVEMGEYVAKHLQ--ALEP 406
L+ G VE + +Q LEP
Sbjct: 1038 LILNLGIAGMVEEAGKIYNEIQRAGLEP 1065
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 124/293 (42%), Gaps = 14/293 (4%)
Query: 101 PDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMV 160
PDR T +L + ++ KQ S K G + T ++ CK+G F A
Sbjct: 326 PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDT 385
Query: 161 FDENPD----PKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGS 216
D D P L ++N +I GL + DA+ +F NM G P T + G
Sbjct: 386 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGK 445
Query: 217 VGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDE----RNV 272
GD L+ + A +I+ N+ + K GR A ++F + + +
Sbjct: 446 SGDSVSALETFEKMKTKGIA--PNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDS 503
Query: 273 SSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDM 332
++ ++ Y+ G ++EA++ M E G P+ + +++ +V E F
Sbjct: 504 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMR 563
Query: 333 MKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMK---PNSIVWGCLM 382
MK + + P + Y ++ LG+ G + EA+++ E M K PN+I + L
Sbjct: 564 MKEM-KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLF 615
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 140/339 (41%), Gaps = 22/339 (6%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIE----LGKQ 124
+++N +I + A+ ++ M+ G P T ++ + + I+ L K+
Sbjct: 189 YSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKE 248
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVF----DENPDPKLGSWNAVIGGLS 180
+ +LG+K + T C I + ++G+ A + DE P + ++ +I L
Sbjct: 249 METLGLKPNVYTFTIC----IRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALC 304
Query: 181 QGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTD 240
A VF M+ PD VT ++L DL Q + + K D
Sbjct: 305 TARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEM--EKDGHVPD 362
Query: 241 ILMWNSLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLIVGYAMHGHVNEALECFW 296
++ + LVD K G A+ M ++ N+ ++ +LI G +++ALE F
Sbjct: 363 VVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFG 422
Query: 297 CMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRA 356
M GV+P T++ + G F+ MK GI P + + L +A
Sbjct: 423 NMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMK-TKGIAPNIVACNASLYSLAKA 481
Query: 357 GLLDEAMKM---VEEMPMKPNSIVWGCLMGACETYGNVE 392
G EA ++ ++++ + P+S+ + +M G ++
Sbjct: 482 GRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEID 520
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 115/275 (41%), Gaps = 13/275 (4%)
Query: 45 HIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHV-LMLRAGVLPDR 103
I +L ++Y + TH E+N N +I + +AL L+ LM P
Sbjct: 835 KIDELFELYKE-MSTHECEANTITHNI--VISGLVKAGNVDDALDLYYDLMSDRDFSPTA 891
Query: 104 YTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFD- 162
T ++ + +S + KQ+ + G + N IN + K+GE +A +F
Sbjct: 892 CTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKR 951
Query: 163 ---ENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGD 219
E P L +++ ++ L G + + F ++ G PD V + + G
Sbjct: 952 MVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHR 1011
Query: 220 LQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMD----ERNVSSW 275
L+ L L + ++ D+ +NSL+ G G ++ A K++ + E NV ++
Sbjct: 1012 LEEALVLFNEMKTSRGIT-PDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTF 1070
Query: 276 TSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTF 310
+LI GY++ G A + M G PN T+
Sbjct: 1071 NALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 183/413 (44%), Gaps = 31/413 (7%)
Query: 45 HIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRY 104
H ++++ A + + +E P +N +I A+ L M+ G PD +
Sbjct: 162 HGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLF 221
Query: 105 TLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDEN 164
T V+ +C+ I+L + K ++ + T I+ C A +F E
Sbjct: 222 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 281
Query: 165 PD----PKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDL 220
+ P + ++N++I L G DA R+ +M P+ VT +L A G L
Sbjct: 282 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 341
Query: 221 QLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDER----NVSSWT 276
+L+ + K + DI ++SL++ + R+D A +F M + NV ++
Sbjct: 342 VEAEKLYDEM--IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 399
Query: 277 SLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNV 336
+LI G+ V E +E F M + G+ N VT+ ++ G Q G C DM + +
Sbjct: 400 TLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ-----GLFQAGDC--DMAQKI 452
Query: 337 Y------GITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM---PMKPNSIVWGCLM-GACE 386
+ G+ P + Y ++D L + G L++A+ + E + M+P+ + ++ G C+
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 387 TYGNVEMG--EYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKE 437
G VE G + + L+ ++P N Y + + + KG+ +E + + MKE
Sbjct: 513 A-GKVEDGWDLFCSLSLKGVKP-NVIIYTTMISGFCRKGLKEEADALFREMKE 563
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 146/342 (42%), Gaps = 19/342 (5%)
Query: 60 HFLESNPAP--FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSF 117
++S P P +N ++ ++ + L M + D Y+ I++ C+
Sbjct: 70 EMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRS 129
Query: 118 AIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDE----NPDPKLGSWN 173
+ L V +K+G + + + +N YC + A + D+ P ++N
Sbjct: 130 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFN 189
Query: 174 AVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHA 233
+I GL A +A+ + M G PD T ++ + GD+ L L L +
Sbjct: 190 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG 249
Query: 234 KAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLIVGYAMHGHVN 289
K D++++ +++D ++ A +F MD + NV ++ SLI +G +
Sbjct: 250 KI--EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 307
Query: 290 EALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEG-RCYFDMMKNVYGITPRLQHYGC 348
+A M E + PN VTF ++ A V GK+ E + Y +M+K I P + Y
Sbjct: 308 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR--SIDPDIFTYSS 365
Query: 349 MVDLLGRAGLLDEAMKMVEEMPMK---PNSIVWGCLM-GACE 386
+++ LDEA M E M K PN + + L+ G C+
Sbjct: 366 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/344 (19%), Positives = 143/344 (41%), Gaps = 14/344 (4%)
Query: 34 TLIATQLCNCTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVL 93
T I LCN +++ ++ + P +N++IRC +A RL
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMDNKGI---RPNVVTYNSLIRCLCNYGRWSDASRLLSD 315
Query: 94 MLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGE 153
M+ + P+ T ++ A + + ++++ +K + + + + IN +C
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 154 FTSARMVFD----ENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVS 209
A+ +F+ ++ P + ++N +I G + + + +F M + G + VT +
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 210 LTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMD- 268
L GD + ++ + DI+ ++ L+D K G+++ A VF +
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVP--PDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Query: 269 ---ERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQE 325
E ++ ++ +I G G V + + F + GV+PN + + ++S G +E
Sbjct: 494 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553
Query: 326 GRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
F MK G P Y ++ R G + ++++EM
Sbjct: 554 ADALFREMKE-DGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 179/422 (42%), Gaps = 30/422 (7%)
Query: 5 FFQL--GRRCYSVSQRSITQTLLLDSANNPVTLIATQLCNCTHI-----HQLNQVYAHIL 57
FFQL R S ++++ + LLD ++ CN I H L A L
Sbjct: 5 FFQLHRNRLVKGNSGKALSFSRLLD-----LSFWVRAFCNYREILRNGLHSLQFNEALDL 59
Query: 58 RTHFLESNPAP--FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQ 115
TH +ES P P ++ ++ +++ + L + GV D YT +++ CQ
Sbjct: 60 FTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQ 119
Query: 116 SFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPD----PKLGS 171
S L +K+G + + T IN +C A + ++ + P +
Sbjct: 120 SSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVM 179
Query: 172 WNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVY 231
+ +I L + G A+ +F M +G PD V SL + + G + L +
Sbjct: 180 YTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMT 239
Query: 232 HAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLIVGYAMHGH 287
K + D++ +N+L+D + K G+ A +++ M N+ ++TSLI G+ M G
Sbjct: 240 KRKI--KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGC 297
Query: 288 VNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEG-RCYFDMMKNVYGITPRLQHY 346
V+EA + F+ M G P+ V + +++ KV + + +++M + G+T Y
Sbjct: 298 VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK--GLTGNTITY 355
Query: 347 GCMVDLLGRAGLLDEAMKMVEEMPMK---PNSIVWGCLMGACETYGNVEMGEYVAKHLQA 403
++ G+ G + A ++ M + PN + L+ G V+ + + +Q
Sbjct: 356 TTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQK 415
Query: 404 LE 405
E
Sbjct: 416 RE 417
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 112/294 (38%), Gaps = 44/294 (14%)
Query: 85 RNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGF 144
R+A L M + + PD T ++ A + +++++ +++ + N + T
Sbjct: 229 RDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSL 288
Query: 145 INLYCKSGEFTSARMVF----DENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGF 200
IN +C G AR +F + P + ++ ++I G + DA+++F M + G
Sbjct: 289 INGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Query: 201 APDGVTMVSLTSACGSVGDLQLGLQ--------------------LHTCVYHAKAAERTD 240
+ +T +L G VG + + LH Y+ K +
Sbjct: 349 TGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALM 408
Query: 241 IL--------------MWNSLVDMYGKC--GRMDLAYKVFATMDERNVSSWTSLIV---- 280
I +W V ++G C G+++ A VF M +R +
Sbjct: 409 IFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQ 468
Query: 281 GYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMK 334
G G V A+ F + GV+PN VT+ ++S G E F MK
Sbjct: 469 GMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 116/275 (42%), Gaps = 14/275 (5%)
Query: 187 DAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNS 246
+A+ +F +M P + L + + + + L C + D+ N
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINL--CDHLQIMGVSHDLYTCNL 112
Query: 247 LVDMYGKCGRMDLAYKVFATM----DERNVSSWTSLIVGYAMHGHVNEALECFWCMREAG 302
L++ + + + LA M E ++ ++TSLI G+ + + EA+ M E G
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 303 VRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLL---GRAGLL 359
++P+ V + ++ + G V FD M+N YGI P + Y +V+ L GR
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMEN-YGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 360 DEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAKHL--QALEPWNDGAYVVLSN 417
D ++ + + +KP+ I + L+ A G E + + ++ P N Y L N
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAP-NIFTYTSLIN 290
Query: 418 IYANKGMWKEVERIRSSMK-EGRLAKVPAYSLTTN 451
+ +G E ++ M+ +G V AY+ N
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLIN 325
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 146/348 (41%), Gaps = 14/348 (4%)
Query: 66 PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQV 125
P+ ++ ++ ++ + L M G+ + YT I++ C+ + L V
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDE----NPDPKLGSWNAVIGGLSQ 181
+K+G + N + +N YC S + A + D+ P ++N +I GL
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 182 GGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI 241
A +A+ + M G PD VT + + GD L L + K +
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKL--EPGV 256
Query: 242 LMWNSLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLIVGYAMHGHVNEALECFWC 297
L++N+++D K MD A +F M+ + NV +++SLI +G ++A
Sbjct: 257 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 316
Query: 298 MREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAG 357
M E + P+ TF ++ A V GK+ E +D M I P + Y +++
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK-RSIDPSIVTYSSLINGFCMHD 375
Query: 358 LLDEAMKMVEEMPMK---PNSIVWGCLMGACETYGNVEMGEYVAKHLQ 402
LDEA +M E M K P+ + + L+ Y VE G V + +
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS 423
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 185/427 (43%), Gaps = 32/427 (7%)
Query: 31 NPVTLIATQLCNCTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRL 90
N VTL ++ L H ++++ A + + P +N +I A+ L
Sbjct: 150 NIVTL-SSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMAL 208
Query: 91 HVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCK 150
M+ G PD T +V+ +C+ +L + + + L+ I+ CK
Sbjct: 209 IDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCK 268
Query: 151 SGEFTSARMVFDENPD----PKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVT 206
A +F E P + +++++I L G DA R+ +M PD T
Sbjct: 269 YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT 328
Query: 207 MVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFAT 266
+L A G L +L+ + K + I+ ++SL++ + R+D A ++F
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEM--VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386
Query: 267 MDER----NVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGK 322
M + +V ++ +LI G+ + V E +E F M + G+ N VT+ ++ G
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ-----GL 441
Query: 323 VQEGRCYFDMMKNVY------GITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM---PMKP 373
Q G C DM + ++ G+ P + Y ++D L + G L++AM + E + M+P
Sbjct: 442 FQAGDC--DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 374 NSIVWGCLM-GACETYGNVEMG--EYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVER 430
+ ++ G C+ G VE G + L+ ++P + AY + + + KG +E +
Sbjct: 500 TIYTYNIMIEGMCKA-GKVEDGWDLFCNLSLKGVKP-DVVAYNTMISGFCRKGSKEEADA 557
Query: 431 IRSSMKE 437
+ MKE
Sbjct: 558 LFKEMKE 564
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 143/330 (43%), Gaps = 51/330 (15%)
Query: 86 NALRLHVLMLRAGVLPDRYTLPIVLKAVCQ----SFAIELGKQVHSLGVKIGLQTNEYCE 141
+A+ L M+++ P +L A+ + I LG+Q+ +LG+ N Y
Sbjct: 64 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGI----PHNHYTY 119
Query: 142 TGFINLYCKSGEFTSARMVFDE----NPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRR 197
+ IN +C+ + A V + +P + + ++++ G +A+ + M
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 198 HGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAE-------------RTDILMW 244
G+ P+ VT +L +H H KA+E + D++ +
Sbjct: 180 TGYQPNTVTFNTL---------------IHGLFLHNKASEAMALIDRMVAKGCQPDLVTY 224
Query: 245 NSLVDMYGKCGRMDLAYKVFATMD----ERNVSSWTSLIVGYAMHGHVNEALECFWCMRE 300
+V+ K G DLA+ + M+ E V + ++I G + H+++AL F M
Sbjct: 225 GVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMET 284
Query: 301 AGVRPNYVTFVGVLSA-CVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLL 359
G+RPN VT+ ++S C +G R DM++ I P + + ++D + G L
Sbjct: 285 KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER--KINPDVFTFSALIDAFVKEGKL 342
Query: 360 DEAMKMVEEM---PMKPNSIVWGCLM-GAC 385
EA K+ +EM + P+ + + L+ G C
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFC 372
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 118/299 (39%), Gaps = 18/299 (6%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQ 124
NP F ++ +I + + A +L+ M++ + P T ++ C ++ KQ
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLG----SWNAVIGGLS 180
+ V + I +CK VF E L ++N +I GL
Sbjct: 383 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 442
Query: 181 QGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTD 240
Q G A +F M G P+ +T +L G L+ + + Y ++
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE--YLQRSKMEPT 500
Query: 241 ILMWNSLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLIVGYAMHGHVNEALECFW 296
I +N +++ K G+++ + +F + + +V ++ ++I G+ G EA F
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 560
Query: 297 CMREAGVRPNYVTFVGVLSACVHGGK-------VQEGR-CYFDMMKNVYGITPRLQHYG 347
M+E G PN + ++ A + G ++E R C F + G+ + H G
Sbjct: 561 EMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 619
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 158/348 (45%), Gaps = 19/348 (5%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
+NN++ + R++ A + ML G+ P+ +T I++ ++ + V +
Sbjct: 487 YNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMN 546
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSAR-----MVFDENPDPKLGSWNAVIGGLSQGGLA 185
+ NE IN CK G+ + A+ ++ ++ S+N++I G + G
Sbjct: 547 ASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDT 606
Query: 186 RDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAE-RTDILMW 244
A+ + M +G +P+ VT SL + + L L++ + K+ E + D+ +
Sbjct: 607 DSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEM---THEMKSMELKLDLPAY 663
Query: 245 NSLVDMYGKCGRMDLAYKVFATMDE----RNVSSWTSLIVGYAMHGHVNEALECFWCMRE 300
+L+D + K M AY +F+ + E NVS + SLI G+ G ++ A++ + M
Sbjct: 664 GALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVN 723
Query: 301 AGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLD 360
G+ + T+ ++ + G + + + ++ GI P + +V+ L + G
Sbjct: 724 DGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDL-GIVPDEILHMVLVNGLSKKGQFL 782
Query: 361 EAMKMVEEMPMK---PNSIVWGCLMGACETYGNVEMGEYVAKHLQALE 405
+A KM+EEM K PN +++ ++ GN + E H + LE
Sbjct: 783 KASKMLEEMKKKDVTPNVLLYSTVIAGHHREGN--LNEAFRLHDEMLE 828
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/378 (17%), Positives = 151/378 (39%), Gaps = 41/378 (10%)
Query: 3 RFFFQLGRRCYSVSQRSITQTLLLDSANNPVTLIATQLCNCTHIHQLNQVYAHILRTHFL 62
RF F+L R ++ + + +D A + L+ + + +N V + ++R++ +
Sbjct: 162 RFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKV-VPFVPYVNNVLSSLVRSNLI 220
Query: 63 ESNPAPFNW--------NNI-----IRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIV 109
+ +N +N+ +R R P A+++ ++ G PD +
Sbjct: 221 DEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLA 280
Query: 110 LKAVCQS----FAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDEN- 164
++A C++ A++L +++ K+G+ ++ T I + K G A V DE
Sbjct: 281 VQAACKTPDLVMALDLLREMRG---KLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMV 337
Query: 165 ----PDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDL 220
P + + +++ G +G A+ +F M G APD V + ++
Sbjct: 338 GFGIPMSVIAA-TSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEM 396
Query: 221 QLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTS--- 277
+ ++ + + + A + ++ ++++ K + A ++F + SW +
Sbjct: 397 EKAIEFYMRMKSVRIAPSS--VLVHTMIQGCLKAESPEAALEIF----NDSFESWIAHGF 450
Query: 278 ----LIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMM 333
+ + + G V+ A M + G+ PN V + ++ A + R F M
Sbjct: 451 MCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEM 510
Query: 334 KNVYGITPRLQHYGCMVD 351
G+ P Y ++D
Sbjct: 511 LE-KGLEPNNFTYSILID 527
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 156/341 (45%), Gaps = 19/341 (5%)
Query: 62 LESNPAP--FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAI 119
++S P P F +N ++ +++ + L M R G+ + YT I++ C+ I
Sbjct: 2 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 61
Query: 120 ELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPD----PKLGSWNAV 175
L + +K+G + + + +N YC + A + D+ + P ++ +
Sbjct: 62 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121
Query: 176 IGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKA 235
I GL A +A+ + M + G P+ VT + + GD+ L L + AK
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181
Query: 236 AERTDILMWNSLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLIVGYAMHGHVNEA 291
D++++N+++D K +D A +F M+ + NV +++SLI +G ++A
Sbjct: 182 --EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 239
Query: 292 LECFWCMREAGVRPNYVTFVGVLSACVHGGK-VQEGRCYFDMMKNVYGITPRLQHYGCMV 350
+ M E + PN VTF ++ A V GK V+ + + DM+K I P + Y ++
Sbjct: 240 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR--SIDPDIFTYNSLI 297
Query: 351 DLLGRAGLLDEAMKMVEEMPMK---PNSIVWGCLM-GACET 387
+ LD+A +M E M K P+ + L+ G C++
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 338
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 140/322 (43%), Gaps = 51/322 (15%)
Query: 94 MLRAGVLPDRYTLPIVLKAVCQ----SFAIELGKQVHSLGVKIGLQTNEYCETGFINLYC 149
M+++ LP + +L A+ + I LG+++ LG+ N Y IN +C
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGI----SHNLYTYNILINCFC 56
Query: 150 KSGEFTSARMVFDE----NPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGV 205
+ + + A + + +P + + ++++ G G DA+ + M G+ PD +
Sbjct: 57 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 116
Query: 206 TMVSLTSACGSVGDLQLGLQLHTCVYHAKAAE-------------RTDILMWNSLVDMYG 252
T +L +H H KA+E + +++ + +V+
Sbjct: 117 TFTTL---------------IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 161
Query: 253 KCGRMDLAYKVFATMD----ERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYV 308
K G +DLA+ + M+ E +V + ++I + HV++AL F M G+RPN V
Sbjct: 162 KRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 221
Query: 309 TFVGVLSA-CVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVE 367
T+ ++S C +G + DM++ I P L + ++D + G EA K+ +
Sbjct: 222 TYSSLISCLCSYGRWSDASQLLSDMIEK--KINPNLVTFNALIDAFVKEGKFVEAEKLHD 279
Query: 368 EM---PMKPNSIVWGCLM-GAC 385
+M + P+ + L+ G C
Sbjct: 280 DMIKRSIDPDIFTYNSLINGFC 301
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/344 (20%), Positives = 136/344 (39%), Gaps = 18/344 (5%)
Query: 36 IATQLCNCTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLML 95
I LC H+ ++ + P ++++I C +A +L M+
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGI---RPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 96 RAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFT 155
+ P+ T ++ A + +++H +K + + + IN +C
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 156 SARMVFD----ENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLT 211
A+ +F+ ++ P L ++N +I G + D +F M G D VT +L
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 212 SACGSVGDLQLGLQLHTCVYHAKAAERT--DILMWNSLVDMYGKCGRMDLAYKVFATMDE 269
GD + V+ ++ DI+ ++ L+D G+++ A +VF M +
Sbjct: 368 QGLFHDGDCDNAQK----VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 423
Query: 270 RNVS----SWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQE 325
+ +T++I G G V++ + F + GV+PN VT+ ++S +QE
Sbjct: 424 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 483
Query: 326 GRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
MK G P Y ++ R G + +++ EM
Sbjct: 484 AYALLKKMKE-DGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 101/474 (21%), Positives = 199/474 (41%), Gaps = 63/474 (13%)
Query: 24 LLLDSANNPVTLIATQLCNCTHIHQL-----NQVY------AHILRTHFLESNPAP--FN 70
LLL+ NNP T ++ +H H N+++ A L L+S P P +
Sbjct: 22 LLLERGNNPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVD 81
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
+ ++ ++ + L+ M G+ D Y+ I++ C+ + L + +
Sbjct: 82 FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMM 141
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPD----PKLGSWNAVIGGLSQGGLAR 186
K+G + + +N +C+ F A + D P + +N VI GL +
Sbjct: 142 KLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLN 201
Query: 187 DAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNS 246
+A+ VF M + G D VT +L S + G +L + K +++ + +
Sbjct: 202 NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDP--NVIFFTA 259
Query: 247 LVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLIVGYAMHGHVNEALECFWCMREAG 302
L+D + K G + A ++ M R NV ++ SLI G+ +HG + +A F M G
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Query: 303 VRPNYVTFVGVLSACVHGGKVQEGRCYF----------------------------DMMK 334
P+ VT+ +++ +V++G F ++ +
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 379
Query: 335 NVY------GITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM---PMKPNSIVWGCLM-GA 384
V+ G++P + Y ++D L G +++A+ MVE++ M + I + ++ G
Sbjct: 380 KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 439
Query: 385 CETYGNVEM-GEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMKE 437
C T E + + + ++P + AY+ + + KG+ +E +++ MKE
Sbjct: 440 CRTDKLKEAWCLFRSLTRKGVKP-DAIAYITMISGLCRKGLQREADKLCRRMKE 492
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 155/341 (45%), Gaps = 19/341 (5%)
Query: 62 LESNPAP--FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAI 119
++S P P +N ++ +++ + L M R ++ YT I++ C+ I
Sbjct: 77 VKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQI 136
Query: 120 ELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPD----PKLGSWNAV 175
L + +K+G + + + +N YC + A + D+ + P ++ +
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 196
Query: 176 IGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKA 235
I GL A +A+ + M + G P+ VT + + GD L L L + AK
Sbjct: 197 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKI 256
Query: 236 AERTDILMWNSLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLIVGYAMHGHVNEA 291
D++++N+++D K +D A +F M+ + NV +++SLI +G ++A
Sbjct: 257 --EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 314
Query: 292 LECFWCMREAGVRPNYVTFVGVLSACVHGGK-VQEGRCYFDMMKNVYGITPRLQHYGCMV 350
+ M E + PN VTF ++ A V GK V+ + Y DM+K I P + Y +V
Sbjct: 315 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR--SIDPDIFTYNSLV 372
Query: 351 DLLGRAGLLDEAMKMVEEMPMK---PNSIVWGCLM-GACET 387
+ LD+A +M E M K P+ + + L+ G C++
Sbjct: 373 NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 413
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 141/330 (42%), Gaps = 51/330 (15%)
Query: 86 NALRLHVLMLRAGVLPDRYTLPIVLKAVCQ----SFAIELGKQVHSLGVKIGLQTNEYCE 141
+A+ L M+++ LP +L A+ + I LG+++ L + GL Y
Sbjct: 68 DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL----YTY 123
Query: 142 TGFINLYCKSGEFTSARMVFDE----NPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRR 197
IN +C+ + + A + + +P + + ++++ G G DA+ + M
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 198 HGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAE-------------RTDILMW 244
G+ PD +T +L +H H KA+E + +++ +
Sbjct: 184 MGYRPDTITFTTL---------------IHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 245 NSLVDMYGKCGRMDLAYKVFATMD----ERNVSSWTSLIVGYAMHGHVNEALECFWCMRE 300
+V+ K G DLA + M+ E +V + ++I + HV++AL F M
Sbjct: 229 GVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 288
Query: 301 AGVRPNYVTFVGVLSA-CVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLL 359
G+RPN VT+ ++S C +G + DM++ I P L + ++D + G
Sbjct: 289 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK--KINPNLVTFNALIDAFVKEGKF 346
Query: 360 DEAMKMVEEM---PMKPNSIVWGCLM-GAC 385
EA K+ ++M + P+ + L+ G C
Sbjct: 347 VEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/344 (19%), Positives = 136/344 (39%), Gaps = 18/344 (5%)
Query: 36 IATQLCNCTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLML 95
I LC H+ ++ + P ++++I C +A +L M+
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGI---RPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 96 RAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFT 155
+ P+ T ++ A + ++++ +K + + + +N +C
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 156 SARMVFD----ENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLT 211
A+ +F+ ++ P + ++N +I G + D +F M G D VT +L
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 212 SACGSVGDLQLGLQLHTCVYHAKAAERT--DILMWNSLVDMYGKCGRMDLAYKVFATMDE 269
GD + V+ ++ DI+ ++ L+D G+++ A +VF M +
Sbjct: 443 QGLFHDGDCDNAQK----VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Query: 270 RNVS----SWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQE 325
+ +T++I G G V++ + F + GV+PN VT+ ++S +QE
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 558
Query: 326 GRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
MK G P Y ++ R G + +++ EM
Sbjct: 559 AYALLKKMKE-DGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 162/385 (42%), Gaps = 35/385 (9%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQS----FAIE 120
+P +N I+R + A+ + ML+ PD T I+++A C+ A++
Sbjct: 201 SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMK 260
Query: 121 LGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPD----PKLGSWNAVI 176
L ++ G + T +N CK G A ++ P P + + N ++
Sbjct: 261 LLDEMRDRGCTPDVVTYNV----LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Query: 177 GGLSQGGLARDAIRVFVNMRRHGFAPDGVT---MVSLTSACGSVG---DLQLGLQLHTCV 230
+ G DA ++ +M R GF+P VT +++ G +G D+ + H C
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGC- 375
Query: 231 YHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLIVGYAMHG 286
+ + L +N L+ + K +MD A + M R ++ ++ +++ G
Sbjct: 376 -------QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDG 428
Query: 287 HVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHY 346
V +A+E + G P +T+ V+ GK + D M+ + P Y
Sbjct: 429 KVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR-AKDLKPDTITY 487
Query: 347 GCMVDLLGRAGLLDEAMKM---VEEMPMKPNSIVWGCLM-GACETYGNVEMGEYVAKHLQ 402
+V L R G +DEA+K E M ++PN++ + +M G C++ +++ +
Sbjct: 488 SSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMIN 547
Query: 403 ALEPWNDGAYVVLSNIYANKGMWKE 427
N+ +Y +L A +GM KE
Sbjct: 548 RGCKPNETSYTILIEGLAYEGMAKE 572
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 151/339 (44%), Gaps = 19/339 (5%)
Query: 66 PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQV 125
P +N +I Y + NAL + + R V PD T +L+++C S ++ +V
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPD----PKLGSWNAVIGGLSQ 181
++ + T I C+ A + DE D P + ++N ++ G+ +
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286
Query: 182 GGLARDAIRVFVNMRRHGFAPDGVTM-VSLTSACGSVGDLQLGLQLHTCVYHAKAAERTD 240
G +AI+ +M G P+ +T + L S C S G +L + +
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC-STGRWMDAEKLLADML--RKGFSPS 343
Query: 241 ILMWNSLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLIVGYAMHGHVNEALECFW 296
++ +N L++ + G + A + M + N S+ L+ G+ ++ A+E
Sbjct: 344 VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Query: 297 CMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRA 356
M G P+ VT+ +L+A GKV++ + + + G +P L Y ++D L +A
Sbjct: 404 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS-KGCSPVLITYNTVIDGLAKA 462
Query: 357 GLLDEAMKMVEEM---PMKPNSIVWGCLMGACETYGNVE 392
G +A+K+++EM +KP++I + L+G G V+
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVD 501
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 128/291 (43%), Gaps = 11/291 (3%)
Query: 87 ALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFIN 146
A++ M +G P+ T I+L+++C + +++ + ++ G + IN
Sbjct: 293 AIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN 352
Query: 147 LYCKSGEFTSARMVFDENPD----PKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAP 202
C+ G A + ++ P P S+N ++ G + AI M G P
Sbjct: 353 FLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYP 412
Query: 203 DGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYK 262
D VT ++ +A G ++ +++ + + ++ +N+++D K G+ A K
Sbjct: 413 DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV--LITYNTVIDGLAKAGKTGKAIK 470
Query: 263 VFATMDERNVS----SWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACV 318
+ M +++ +++SL+ G + G V+EA++ F G+RPN VTF ++
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 530
Query: 319 HGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
+ + M N G P Y +++ L G+ EA++++ E+
Sbjct: 531 KSRQTDRAIDFLVFMIN-RGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 116/275 (42%), Gaps = 16/275 (5%)
Query: 183 GLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDIL 242
G + + NM HG PD + +L +G + ++ + + A D++
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAV--PDVI 173
Query: 243 MWNSLVDMYGKCGRMDLAYKVFATMD-ERNVSSWTSLIVGYAMHGHVNEALECFWCMREA 301
+N ++ Y K G ++ A V M +V ++ +++ G + +A+E M +
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233
Query: 302 GVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDE 361
P+ +T+ ++ A V D M++ G TP + Y +V+ + + G LDE
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRD-RGCTPDVVTYNVLVNGICKEGRLDE 292
Query: 362 AMKMVEEMPM---KPNSIVWGCLMGA-CETYGNVEMGEYVAKHLQALEPWNDGAYVVLSN 417
A+K + +MP +PN I ++ + C T ++ + +A L+ + + +L N
Sbjct: 293 AIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN 352
Query: 418 IYANKGMWKEVERIRSSMKEGRLAKVPAYSLTTNS 452
KG+ I L K+P + NS
Sbjct: 353 FLCRKGLLGRAIDI--------LEKMPQHGCQPNS 379
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 149/347 (42%), Gaps = 51/347 (14%)
Query: 86 NALRLHVLMLRAGVLPDRYTLPIVLKAVCQ----SFAIELGKQVHSLGVKIGLQTNEYCE 141
+A+ L M+++ P +L A+ + I LG+Q+ +LG+ N Y
Sbjct: 58 DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGI----SHNLYTY 113
Query: 142 TGFINLYCKSGEFTSARMVFDE----NPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRR 197
+ FIN +C+ + + A + + P + + N+++ G G +A+ + M
Sbjct: 114 SIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 173
Query: 198 HGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAE-------------RTDILMW 244
G+ PD VT +L +H H KA+E + D++ +
Sbjct: 174 MGYQPDTVTFTTL---------------VHGLFQHNKASEAVALVERMVVKGCQPDLVTY 218
Query: 245 NSLVDMYGKCGRMDLAYKVFATMD----ERNVSSWTSLIVGYAMHGHVNEALECFWCMRE 300
++++ K G DLA + M+ E +V + ++I G + H+++A + F M
Sbjct: 219 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMET 278
Query: 301 AGVRPNYVTFVGVLSA-CVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLL 359
G++P+ T+ ++S C +G R DM++ I P L + ++D + G L
Sbjct: 279 KGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEK--NINPDLVFFNALIDAFVKEGKL 336
Query: 360 DEAMKMVEEMPMK----PNSIVWGCLMGACETYGNVEMGEYVAKHLQ 402
EA K+ +EM P+ + + L+ Y VE G V + +
Sbjct: 337 VEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMS 383
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/342 (20%), Positives = 141/342 (41%), Gaps = 17/342 (4%)
Query: 66 PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQV 125
P+ ++ ++ ++ + L M G+ + YT I + C+ + L +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPD----PKLGSWNAVIGGLSQ 181
+K+G + +N +C + A + D+ + P ++ ++ GL Q
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 182 GGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI 241
A +A+ + M G PD VT ++ + G+ L L L + K D+
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKI--EADV 250
Query: 242 LMWNSLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLIVGYAMHGHVNEALECFWC 297
+++N+++D K MD A+ +F M+ + +V ++ LI +G ++A
Sbjct: 251 VIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSD 310
Query: 298 MREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAG 357
M E + P+ V F ++ A V GK+ E +D M P + Y ++ +
Sbjct: 311 MLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK 370
Query: 358 LLDEAMKMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVAK 399
++E M++ EM + L+G TY + G + A+
Sbjct: 371 RVEEGMEVFREMSQRG-------LVGNTVTYTTLIHGFFQAR 405
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 128/310 (41%), Gaps = 16/310 (5%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
+N II + + +A L M G+ PD +T ++ +C ++ S +
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPD-----PKLGSWNAVIGGLSQGGLA 185
+ + + I+ + K G+ A ++DE P + ++N +I G +
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 186 RDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAE--RTDILM 243
+ + VF M + G + VT +L D Q+ V+ ++ DI+
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCD-NAQM---VFKQMVSDGVHPDIMT 428
Query: 244 WNSLVDMYGKCGRMDLAYKVFATMDERN----VSSWTSLIVGYAMHGHVNEALECFWCMR 299
+N L+D G ++ A VF M +R+ + ++T++I G V + + F +
Sbjct: 429 YNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLS 488
Query: 300 EAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLL 359
GV+PN VT+ ++S G +E F MK G P Y ++ R G
Sbjct: 489 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKE-DGPLPNSGTYNTLIRARLRDGDE 547
Query: 360 DEAMKMVEEM 369
+ ++++EM
Sbjct: 548 AASAELIKEM 557
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 153/331 (46%), Gaps = 18/331 (5%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQ 124
P +++ ++ Y R +L +M R G+ P+ Y ++ +C+ + ++
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDE----NPDPKLGSWNAVIGGLS 180
S ++ G+ + T I+ +CK G+ +A F E + P + ++ A+I G
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 181 QGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTD 240
Q G +A ++F M G PD VT L + G ++ ++H + A + +
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS--PN 455
Query: 241 ILMWNSLVDMYGKCGRMDLAYKVFATM----DERNVSSWTSLIVGYAMHGHVNEALECFW 296
++ + +L+D K G +D A ++ M + N+ ++ S++ G G++ EA++
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 297 CMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVY--GITPRLQHYGCMVDLLG 354
AG+ + VT+ ++ A G++ + + +++K + G+ P + + +++
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ---EILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 355 RAGLLDEAMKMVEEMPMK---PNSIVWGCLM 382
G+L++ K++ M K PN+ + L+
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 148/330 (44%), Gaps = 56/330 (16%)
Query: 156 SARMVFDENPDP----KLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLT 211
+A +VF E P+ + S+N VI + Q G ++A + + M G+ PD ++ ++
Sbjct: 229 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 212 SACGSVGDL-----------QLGLQLHTCVYHA---------KAAERT------------ 239
+ G+L + GL+ ++ +Y + K AE
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 240 -DILMWNSLVDMYGKCGRMDLAYKVFATMDERNVS----SWTSLIVGYAMHGHVNEALEC 294
D +++ +L+D + K G + A K F M R+++ ++T++I G+ G + EA +
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 295 FWCMREAGVRPNYVTFVGVLSACVHGGKVQEG-RCYFDMMKNVYGITPRLQHYGCMVDLL 353
F M G+ P+ VTF +++ G +++ R + M++ G +P + Y ++D L
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA--GCSPNVVTYTTLIDGL 466
Query: 354 GRAGLLDEAMKMVEEM---PMKPNSIVWGCLMGACETYGNVE-----MGEYVAKHLQALE 405
+ G LD A +++ EM ++PN + ++ GN+E +GE+ A L A
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA-- 524
Query: 406 PWNDGAYVVLSNIYANKGMWKEVERIRSSM 435
+ Y L + Y G + + I M
Sbjct: 525 --DTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 131/330 (39%), Gaps = 19/330 (5%)
Query: 13 YSVSQRSITQTLLLDSANNPVTLIATQLCNCTHIHQLNQVYAHILRTHFLESNPAPFNWN 72
Y + R IT +L T I + C + + +++ H + LE P +
Sbjct: 375 YEMHSRDITPDVL------TYTAIISGFCQIGDMVEAGKLF-HEMFCKGLE--PDSVTFT 425
Query: 73 NIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKI 132
+I Y + ++A R+H M++AG P+ T ++ +C+ ++ ++ KI
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 133 GLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLG----SWNAVIGGLSQGGLARDA 188
GLQ N + +N CKSG A + E L ++ ++ + G A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
+ M G P VT L + G L+ G +L + A + +NSLV
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA--PNATTFNSLV 603
Query: 249 DMYGKCGRMDLAYKVFATMDERNV----SSWTSLIVGYAMHGHVNEALECFWCMREAGVR 304
Y + A ++ M R V ++ +L+ G+ ++ EA F M+ G
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663
Query: 305 PNYVTFVGVLSACVHGGKVQEGRCYFDMMK 334
+ T+ ++ + K E R FD M+
Sbjct: 664 VSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 124/290 (42%), Gaps = 28/290 (9%)
Query: 162 DENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPD----GVTMVSLTSACGSV 217
D DP++ ++ L GL R+A RVF M +G V + L+ C
Sbjct: 170 DWGSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT 227
Query: 218 GDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDER----NVS 273
+ + + ++ +N ++ + GR+ A+ + M+ + +V
Sbjct: 228 ATAIIVFR-----EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVI 282
Query: 274 SWTSLIVGYAMHGHVNEALECFWCMREAGVRPN---YVTFVGVLSACVHGGKVQEGRCYF 330
S+++++ GY G +++ + M+ G++PN Y + +G+L + +E +
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA--FS 340
Query: 331 DMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM---PMKPNSIVWGCLM-GACE 386
+M++ GI P Y ++D + G + A K EM + P+ + + ++ G C+
Sbjct: 341 EMIRQ--GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 387 TYGNVEMGEYVAKHL-QALEPWNDGAYVVLSNIYANKGMWKEVERIRSSM 435
VE G+ + + LEP + + L N Y G K+ R+ + M
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEP-DSVTFTELINGYCKAGHMKDAFRVHNHM 447
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 153/331 (46%), Gaps = 18/331 (5%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQ 124
P +++ ++ Y R +L +M R G+ P+ Y ++ +C+ + ++
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDE----NPDPKLGSWNAVIGGLS 180
S ++ G+ + T I+ +CK G+ +A F E + P + ++ A+I G
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 181 QGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTD 240
Q G +A ++F M G PD VT L + G ++ ++H + A + +
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS--PN 455
Query: 241 ILMWNSLVDMYGKCGRMDLAYKVFATM----DERNVSSWTSLIVGYAMHGHVNEALECFW 296
++ + +L+D K G +D A ++ M + N+ ++ S++ G G++ EA++
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 297 CMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVY--GITPRLQHYGCMVDLLG 354
AG+ + VT+ ++ A G++ + + +++K + G+ P + + +++
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ---EILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 355 RAGLLDEAMKMVEEMPMK---PNSIVWGCLM 382
G+L++ K++ M K PN+ + L+
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 148/330 (44%), Gaps = 56/330 (16%)
Query: 156 SARMVFDENPDP----KLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLT 211
+A +VF E P+ + S+N VI + Q G ++A + + M G+ PD ++ ++
Sbjct: 229 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 212 SACGSVGDL-----------QLGLQLHTCVYHA---------KAAERT------------ 239
+ G+L + GL+ ++ +Y + K AE
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 240 -DILMWNSLVDMYGKCGRMDLAYKVFATMDERNVS----SWTSLIVGYAMHGHVNEALEC 294
D +++ +L+D + K G + A K F M R+++ ++T++I G+ G + EA +
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 295 FWCMREAGVRPNYVTFVGVLSACVHGGKVQEG-RCYFDMMKNVYGITPRLQHYGCMVDLL 353
F M G+ P+ VTF +++ G +++ R + M++ G +P + Y ++D L
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA--GCSPNVVTYTTLIDGL 466
Query: 354 GRAGLLDEAMKMVEEM---PMKPNSIVWGCLMGACETYGNVE-----MGEYVAKHLQALE 405
+ G LD A +++ EM ++PN + ++ GN+E +GE+ A L A
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA-- 524
Query: 406 PWNDGAYVVLSNIYANKGMWKEVERIRSSM 435
+ Y L + Y G + + I M
Sbjct: 525 --DTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 131/330 (39%), Gaps = 19/330 (5%)
Query: 13 YSVSQRSITQTLLLDSANNPVTLIATQLCNCTHIHQLNQVYAHILRTHFLESNPAPFNWN 72
Y + R IT +L T I + C + + +++ H + LE P +
Sbjct: 375 YEMHSRDITPDVL------TYTAIISGFCQIGDMVEAGKLF-HEMFCKGLE--PDSVTFT 425
Query: 73 NIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKI 132
+I Y + ++A R+H M++AG P+ T ++ +C+ ++ ++ KI
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 133 GLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLG----SWNAVIGGLSQGGLARDA 188
GLQ N + +N CKSG A + E L ++ ++ + G A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
+ M G P VT L + G L+ G +L + A + +NSLV
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA--PNATTFNSLV 603
Query: 249 DMYGKCGRMDLAYKVFATMDERNV----SSWTSLIVGYAMHGHVNEALECFWCMREAGVR 304
Y + A ++ M R V ++ +L+ G+ ++ EA F M+ G
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663
Query: 305 PNYVTFVGVLSACVHGGKVQEGRCYFDMMK 334
+ T+ ++ + K E R FD M+
Sbjct: 664 VSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 124/290 (42%), Gaps = 28/290 (9%)
Query: 162 DENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPD----GVTMVSLTSACGSV 217
D DP++ ++ L GL R+A RVF M +G V + L+ C
Sbjct: 170 DWGSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT 227
Query: 218 GDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDER----NVS 273
+ + + ++ +N ++ + GR+ A+ + M+ + +V
Sbjct: 228 ATAIIVFR-----EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVI 282
Query: 274 SWTSLIVGYAMHGHVNEALECFWCMREAGVRPN---YVTFVGVLSACVHGGKVQEGRCYF 330
S+++++ GY G +++ + M+ G++PN Y + +G+L + +E +
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA--FS 340
Query: 331 DMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM---PMKPNSIVWGCLM-GACE 386
+M++ GI P Y ++D + G + A K EM + P+ + + ++ G C+
Sbjct: 341 EMIRQ--GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 387 TYGNVEMGEYVAKHL-QALEPWNDGAYVVLSNIYANKGMWKEVERIRSSM 435
VE G+ + + LEP + + L N Y G K+ R+ + M
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEP-DSVTFTELINGYCKAGHMKDAFRVHNHM 447
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 154/356 (43%), Gaps = 29/356 (8%)
Query: 66 PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQV 125
P +++++ + +L L M G LPD + ++L+A +S +I+ V
Sbjct: 280 PDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGV 339
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDE----NPDPKLGSWNAVIGGLSQ 181
G N + +NL+ +SG + R +F E N DP ++N +I +
Sbjct: 340 FHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGE 399
Query: 182 GGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVG---DLQLGLQLHTC---VYHAKA 235
GG ++ + +F +M PD T + ACG G D + LQ T V +KA
Sbjct: 400 GGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKA 459
Query: 236 AERTDILMWNSLVDMYGKCGRMDLAYKVFATMDE----RNVSSWTSLIVGYAMHGHVNEA 291
+ +++ +G+ + A F TM E ++ ++ SL+ +A G V E+
Sbjct: 460 --------YTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKES 511
Query: 292 LECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEG-RCYFDMMKNVYGITPRLQHYGCMV 350
+ ++G+ N TF + A GGK +E + Y DM K+ P + ++
Sbjct: 512 EAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSR--CDPDERTLEAVL 569
Query: 351 DLLGRAGLLDEAMKMVEEMPMKP--NSIVWGCLMGACETYGNVEMGEYVAKHLQAL 404
+ A L+DE + EEM SI+ C+M A YG E + V + L+ +
Sbjct: 570 SVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAV--YGKTERWDDVNELLEEM 623
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 131/291 (45%), Gaps = 31/291 (10%)
Query: 133 GLQTNEYCETGFINLYCKSGEFTSARMVFD----ENPDPKLGSWNAVIGGLSQGGLARDA 188
G+ + + T IN Y ++G + ++ + D E P + ++N VI ++GGL +
Sbjct: 171 GVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEG 230
Query: 189 IR-VFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERT-------- 239
+ +F MR G PD VT +L SAC G LG + A+ RT
Sbjct: 231 LLGLFAEMRHEGIQPDIVTYNTLLSACAIRG---LGDE-------AEMVFRTMNDGGIVP 280
Query: 240 DILMWNSLVDMYGKCGRMDLAYKVFATMDE----RNVSSWTSLIVGYAMHGHVNEALECF 295
D+ ++ LV+ +GK R++ + M +++S+ L+ YA G + EA+ F
Sbjct: 281 DLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVF 340
Query: 296 WCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGR 355
M+ AG PN T+ +L+ G+ + R F MK+ P Y ++++ G
Sbjct: 341 HQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSS-NTDPDAATYNILIEVFGE 399
Query: 356 AGLLDEAMKMVEEM---PMKPNSIVWGCLMGACETYGNVEMGEYVAKHLQA 403
G E + + +M ++P+ + ++ AC G E + +++ A
Sbjct: 400 GGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTA 450
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 243 MWNSLVDMYGKCGRMDLAYKVFATMDERNVS----SWTSLIVGYAMHGHVNEALECFWCM 298
++ ++ + G+ G +D +VF M + VS S+T+LI Y +G +LE M
Sbjct: 143 IYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRM 202
Query: 299 REAGVRPNYVTFVGVLSACVHGGKVQEG-----------------------------RCY 329
+ + P+ +T+ V++AC GG EG R
Sbjct: 203 KNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGL 262
Query: 330 FDMMKNVY------GITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMK---PNSIVWGC 380
D + V+ GI P L Y +V+ G+ L++ ++ EM P+ +
Sbjct: 263 GDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNV 322
Query: 381 LMGACETYGNVEMGEYVAKHLQAL--EPWNDGAYVVLSNIYANKGMWKEVERIRSSMK 436
L+ A G+++ V +QA P N Y VL N++ G + +V ++ MK
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTP-NANTYSVLLNLFGQSGRYDDVRQLFLEMK 379
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 160/379 (42%), Gaps = 47/379 (12%)
Query: 66 PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQV 125
P F ++ + Y+ E AL ++ + +GV + YT I+L A+C+ IE +++
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDE------NPD------------- 166
+ GL NE I+ YC+ G+ ARM + PD
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCE 436
Query: 167 --------------------PKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVT 206
P + ++N +IGG + + M +G P+ V+
Sbjct: 437 LGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVS 496
Query: 207 MVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFAT 266
+L + C G L Q+ + + ++N L+D G+++ A++
Sbjct: 497 YGTLIN-CLCKGSKLLEAQIVKRDMEDRGVS-PKVRIYNMLIDGCCSKGKIEDAFRFSKE 554
Query: 267 M----DERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGK 322
M E N+ ++ +LI G +M G ++EA + + G++P+ T+ ++S G
Sbjct: 555 MLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGN 614
Query: 323 VQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLM 382
VQ ++ MK GI P L+ Y ++ L + G ++ ++ EM +KP+ +V+ ++
Sbjct: 615 VQRCIALYEEMKRS-GIKPTLKTYHLLISLCTKEG-IELTERLFGEMSLKPDLLVYNGVL 672
Query: 383 GACETYGNVEMGEYVAKHL 401
+G++E + K +
Sbjct: 673 HCYAVHGDMEKAFNLQKQM 691
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/367 (19%), Positives = 154/367 (41%), Gaps = 21/367 (5%)
Query: 29 ANNPVTLIATQLCNCTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNAL 88
+++ +TL+ L V+ +IL + F P+ F + I+ +L L
Sbjct: 143 SSDSLTLLLDHLVKTKQFRVTINVFLNILESDF---RPSKFMYGKAIQAAVKLSDVGKGL 199
Query: 89 RLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLY 148
L M + P + +++ +C+ + +Q+ + L + I+ Y
Sbjct: 200 ELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGY 259
Query: 149 CKSG----EFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDG 204
CK+G F + ++ +P L ++N ++ GL + G+ DA V M+ GF PD
Sbjct: 260 CKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDA 319
Query: 205 VTMVSLTSACGSVGDLQLGLQLHTCVYHA--KAAERTDILMWNSLVDMYGKCGRMDLAYK 262
T L S + L ++ + K T ++ N+L K G+++ A +
Sbjct: 320 FTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALC----KEGKIEKAEE 375
Query: 263 VFATMDER----NVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACV 318
+ + N + ++I GY G + A M + G++P+++ + ++
Sbjct: 376 ILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFC 435
Query: 319 HGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMP---MKPNS 375
G+++ + MK + G++P ++ Y ++ GR D+ +++EM PN
Sbjct: 436 ELGEMENAEKEVNKMK-LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNV 494
Query: 376 IVWGCLM 382
+ +G L+
Sbjct: 495 VSYGTLI 501
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 92/198 (46%), Gaps = 5/198 (2%)
Query: 154 FTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSA 213
F ++ + + + L ++N +I GLS G +A + + + R G PD T SL S
Sbjct: 549 FRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISG 608
Query: 214 CGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDER-NV 272
G G++Q + L+ + ++ + + ++ L+ + K G ++L ++F M + ++
Sbjct: 609 YGFAGNVQRCIALYEEM--KRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEMSLKPDL 665
Query: 273 SSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDM 332
+ ++ YA+HG + +A M E + + T+ ++ + GK+ E R D
Sbjct: 666 LVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDE 725
Query: 333 MKNVYGITPRLQHYGCMV 350
M N + P Y +V
Sbjct: 726 M-NAREMEPEADTYNIIV 742
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 162/371 (43%), Gaps = 30/371 (8%)
Query: 44 THIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDR 103
+++H+ V +L L P +N++I R +A RL LM G++PD+
Sbjct: 441 SNVHKAMGVLNKMLERKVL---PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQ 497
Query: 104 YTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDE 163
+T ++ ++C+S +E + + G+ N T I+ YCK+G+ A ++ ++
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK 557
Query: 164 ----NPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGD 219
N P ++NA+I GL G ++A + M + G P T L GD
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGD 617
Query: 220 LQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVS----SW 275
+ + + D + + + Y + GR+ A + A M E VS ++
Sbjct: 618 FDHAYSRFQQML--SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTY 675
Query: 276 TSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKN 335
+SLI GY G N A + MR+ G P+ TF+ ++ H +++ G+
Sbjct: 676 SSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK---HLLEMKYGK-------- 724
Query: 336 VYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGCL-MGACETYGNVEMG 394
G P L M++ LL+ KMVE + PN+ + L +G CE GN+ +
Sbjct: 725 QKGSEPELCAMSNMMEFDTVVELLE---KMVEH-SVTPNAKSYEKLILGICEV-GNLRVA 779
Query: 395 EYVAKHLQALE 405
E V H+Q E
Sbjct: 780 EKVFDHMQRNE 790
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 157/390 (40%), Gaps = 60/390 (15%)
Query: 46 IHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYT 105
+ ++ QVY +L P + +N ++ Y +L A + ++ AG+ PD +T
Sbjct: 199 VDEMKQVYMEMLEDKVC---PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFT 255
Query: 106 LPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVF---- 161
++ CQ ++ +V + G + NE T I+ C + A +F
Sbjct: 256 YTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMK 315
Query: 162 DENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPD----GVTMVSLTSACGSV 217
D+ P + ++ +I L +A+ + M G P+ V + SL S C
Sbjct: 316 DDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFE 375
Query: 218 GDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVS---- 273
+L Q+ + +++ +N+L++ Y K G ++ A V M+ R +S
Sbjct: 376 KARELLGQM------LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTR 429
Query: 274 ----------------------------------SWTSLIVGYAMHGHVNEALECFWCMR 299
++ SLI G G+ + A M
Sbjct: 430 TYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489
Query: 300 EAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLL 359
+ G+ P+ T+ ++ + +V+E FD ++ G+ P + Y ++D +AG +
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ-KGVNPNVVMYTALIDGYCKAGKV 548
Query: 360 DEAMKMVEEMPMK---PNSIVWGCLM-GAC 385
DEA M+E+M K PNS+ + L+ G C
Sbjct: 549 DEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 129/315 (40%), Gaps = 12/315 (3%)
Query: 63 ESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELG 122
E P + +I+ E AL L M G+ P+ +T +++ ++C E
Sbjct: 318 ECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKA 377
Query: 123 KQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFD----ENPDPKLGSWNAVIGG 178
+++ ++ GL N IN YCK G A V + P ++N +I G
Sbjct: 378 RELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG 437
Query: 179 LSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAER 238
+ + + A+ V M PD VT SL G+ +L + +
Sbjct: 438 YCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV-- 494
Query: 239 TDILMWNSLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLIVGYAMHGHVNEALEC 294
D + S++D K R++ A +F +++++ NV +T+LI GY G V+EA
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 295 FWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLG 354
M PN +TF ++ GK++E + M + G+ P + ++ L
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI-GLQPTVSTDTILIHRLL 613
Query: 355 RAGLLDEAMKMVEEM 369
+ G D A ++M
Sbjct: 614 KDGDFDHAYSRFQQM 628
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 150/334 (44%), Gaps = 17/334 (5%)
Query: 66 PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQV 125
P+ +N ++ ++ + L M G+ D YT I + C+ + L V
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPD----PKLGSWNAVIGGLSQ 181
+ +K+G + + + +N YC S + A + D+ + P ++ +I GL
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 182 GGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI 241
A +A+ + M + G PD VT ++ + GD+ L L L + A+ + ++
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARI--KANV 258
Query: 242 LMWNSLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLIVGYAMHGHVNEALECFWC 297
+++N+++D K +++A +F M+ + NV ++ SLI +G ++A
Sbjct: 259 VIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSN 318
Query: 298 MREAGVRPNYVTFVGVLSACVHGGKVQEG-RCYFDMMKNVYGITPRLQHYGCMVDLLGRA 356
M E + PN VTF ++ A GK+ E + + +M++ I P Y +++
Sbjct: 319 MLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR--SIDPDTITYNLLINGFCMH 376
Query: 357 GLLDEAMKMVEEMPMK---PNSIVWGCLM-GACE 386
LDEA +M + M K PN + L+ G C+
Sbjct: 377 NRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 145/330 (43%), Gaps = 51/330 (15%)
Query: 86 NALRLHVLMLRAGVLPDRYTLPIVLKAVCQ----SFAIELGKQVHSLGVKIGLQTNEYCE 141
+A+ L M+++ P +L AV + I LG+Q+ +LG+ L Y
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDL----YTY 121
Query: 142 TGFINLYCKSGEFTSARMVFDE----NPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRR 197
+ FIN +C+ + + A V + +P + + ++++ G DA+ + M
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 198 HGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAE-------------RTDILMW 244
G+ PD T +L +H H KA+E + D++ +
Sbjct: 182 MGYKPDTFTFTTL---------------IHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 245 NSLVDMYGKCGRMDLAYKVFATMD----ERNVSSWTSLIVGYAMHGHVNEALECFWCMRE 300
++V+ K G +DLA + M+ + NV + ++I + HV A++ F M
Sbjct: 227 GTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET 286
Query: 301 AGVRPNYVTFVGVLSA-CVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLL 359
G+RPN VT+ +++ C +G R +M++ I P + + ++D + G L
Sbjct: 287 KGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK--KINPNVVTFNALIDAFFKEGKL 344
Query: 360 DEAMKMVEEM---PMKPNSIVWGCLM-GAC 385
EA K+ EEM + P++I + L+ G C
Sbjct: 345 VEAEKLHEEMIQRSIDPDTITYNLLINGFC 374
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 136/333 (40%), Gaps = 15/333 (4%)
Query: 66 PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQV 125
P F + +I A+ L M++ G PD T V+ +C+ I+L +
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNL 245
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPD----PKLGSWNAVIGGLSQ 181
+ ++ N I+ CK A +F E P + ++N++I L
Sbjct: 246 LNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCN 305
Query: 182 GGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI 241
G DA R+ NM P+ VT +L A G L +LH + D
Sbjct: 306 YGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP--DT 363
Query: 242 LMWNSLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLIVGYAMHGHVNEALECFWC 297
+ +N L++ + R+D A ++F M + N+ ++ +LI G+ V + +E F
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFRE 423
Query: 298 MREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAG 357
M + G+ N VT+ ++ G + F M + + + Y ++ L G
Sbjct: 424 MSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS-NRVPTDIMTYSILLHGLCSYG 482
Query: 358 LLDEAM---KMVEEMPMKPNSIVWGCLM-GACE 386
LD A+ K +++ M+ N ++ ++ G C+
Sbjct: 483 KLDTALVIFKYLQKSEMELNIFIYNTMIEGMCK 515
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 117/282 (41%), Gaps = 10/282 (3%)
Query: 40 LCNCTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGV 99
LCN +++ +++L NP +N +I + + A +LH M++ +
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKI---NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Query: 100 LPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARM 159
PD T +++ C ++ KQ+ V N IN +CK
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419
Query: 160 VFDENPDPKL----GSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACG 215
+F E L ++ +I G Q G A VF M + D +T L
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLC 479
Query: 216 SVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDER-NVSS 274
S G L L + Y K+ +I ++N++++ K G++ A+ +F ++ + +V +
Sbjct: 480 SYGKLDTALVIFK--YLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVT 537
Query: 275 WTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSA 316
+ ++I G + EA + F M+E G PN T+ ++ A
Sbjct: 538 YNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 138/309 (44%), Gaps = 15/309 (4%)
Query: 54 AHILRTHFLESNPAP--FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLK 111
A L + L+ PAP + +I + + A L +M + G+ PD ++
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 112 AVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFD----ENPDP 167
++ + +G ++ S + G++ + + I++Y KSG+ +A +V+ + P
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 168 KLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLH 227
+ ++ +I GL Q G +A ++ + + G P VT SL G+L+ G L+
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 228 TCVYHAKAAERTDILMWNSLVDMYGKCG----RMDLAYKVFATMDERNVSSWTSLIVGYA 283
+ K D++++ LVD K G M + K+ NV + SLI G+
Sbjct: 450 EDM--IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Query: 284 MHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGR-CYFDMMKNVYGITPR 342
+EAL+ F M G++P+ TF V+ + G+++E +F M K G+ P
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK--MGLEPD 565
Query: 343 LQHYGCMVD 351
Y ++D
Sbjct: 566 ALAYCTLID 574
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 125/275 (45%), Gaps = 17/275 (6%)
Query: 118 AIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTS--ARMVFDENPDPKLGSWNAV 175
A++ + V G ++G+ + C L E S +V D P P + ++ +
Sbjct: 236 ALDFHRLVMERGFRVGIVS---CNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTL 292
Query: 176 IGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKA 235
I G + G A +F M + G PD + +L G L +G +L + H
Sbjct: 293 INGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGV 352
Query: 236 AERTDILMWNSLVDMYGKCGRMDLAYKVFATM----DERNVSSWTSLIVGYAMHGHVNEA 291
+ D+++++S +D+Y K G + A V+ M NV ++T LI G G + EA
Sbjct: 353 --KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 292 LECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEG-RCYFDMMKNVYGITPRLQHYGCMV 350
+ + + G+ P+ VT+ ++ G ++ G Y DM+K G P + YG +V
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK--MGYPPDVVIYGVLV 468
Query: 351 DLLGRAGLLDEAMKMVEEM---PMKPNSIVWGCLM 382
D L + GL+ AM+ +M ++ N +V+ L+
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/397 (20%), Positives = 161/397 (40%), Gaps = 38/397 (9%)
Query: 12 CYSVSQRSITQTLLLDSANNPVTLIATQLCNCTHIHQLNQVYAHILRTHFLESNPAPFNW 71
C +S +T T+L+ LC I++ +Y IL+ P+ +
Sbjct: 384 CQGISPNVVTYTILIKG-----------LCQDGRIYEAFGMYGQILKRGM---EPSIVTY 429
Query: 72 NNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVK 131
+++I + + R+ L+ M++ G PD +++ + + G +H++
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQ-----GLMLHAMRFS 484
Query: 132 I-----GLQTNEYCETGFINLYCKSGEFTSARMVFD----ENPDPKLGSWNAVIGGLSQG 182
+ ++ N I+ +C+ F A VF P + ++ V+
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIME 544
Query: 183 GLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDIL 242
G +A+ +F M + G PD + +L A +GLQL + K + DI
Sbjct: 545 GRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKIS--ADIA 602
Query: 243 MWNSLVDMYGKCGRMDLAYKVFATMDE----RNVSSWTSLIVGYAMHGHVNEALECFWCM 298
+ N ++ + KC R++ A K F + E ++ ++ ++I GY ++EA F +
Sbjct: 603 VCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL 662
Query: 299 REAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGL 358
+ PN VT ++ + F +M G P YGC++D ++
Sbjct: 663 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE-KGSKPNAVTYGCLMDWFSKSVD 721
Query: 359 LDEAMKMVEEMPMK---PNSIVWGCLMGACETYGNVE 392
++ + K+ EEM K P+ + + ++ G V+
Sbjct: 722 IEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD 758
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 123/286 (43%), Gaps = 24/286 (8%)
Query: 80 RLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEY 139
RLE AL L M + G+ PD ++ A C+ +G Q+ L + + +
Sbjct: 546 RLE---EALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIA 602
Query: 140 CETGFINLYCKSGEFTSARMVFDE----NPDPKLGSWNAVIGGLSQGGLARDAIRVFVNM 195
I+L K A F+ +P + ++N +I G +A R+F +
Sbjct: 603 VCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL 662
Query: 196 RRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCG 255
+ F P+ VT+ L D+ +++ + + A+ + + + + L+D + K
Sbjct: 663 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIM--AEKGSKPNAVTYGCLMDWFSKSV 720
Query: 256 RMDLAYKVFATMDERNVS----SWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFV 311
++ ++K+F M E+ +S S++ +I G G V+EA F +A + P+ V +
Sbjct: 721 DIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYA 780
Query: 312 GVLSA-CVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRA 356
++ C G V+ Y M++N G+ P DLL RA
Sbjct: 781 ILIRGYCKVGRLVEAALLYEHMLRN--GVKPD--------DLLQRA 816
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 154/357 (43%), Gaps = 18/357 (5%)
Query: 60 HFLESNPAP--FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSF 117
H ++ P P +++ ++ ++++ + L M G+ + T I+L C+
Sbjct: 71 HMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCS 130
Query: 118 AIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDE----NPDPKLGSWN 173
+ L +K+G + + +N +C+ A +FD+ P + +N
Sbjct: 131 QLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYN 190
Query: 174 AVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHA 233
+I GL + +A+ + M + G PD VT SL S S G ++ +C+
Sbjct: 191 TIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCM--T 248
Query: 234 KAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLIVGYAMHGHVN 289
K D+ +N+L+D K GR+ A + + M R ++ +++ LI G M+ ++
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308
Query: 290 EALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCM 349
EA E F M G P+ VT+ +++ KV+ G F M G+ Y +
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ-RGVVRNTVTYTIL 367
Query: 350 VDLLGRAGLLDEAMKMVEEMP---MKPNSIVWGCLM-GACETYGNVEMGEYVAKHLQ 402
+ RAG L+ A ++ M + PN I + L+ G C+ G +E + +Q
Sbjct: 368 IQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDN-GKIEKALVILADMQ 423
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 142/332 (42%), Gaps = 16/332 (4%)
Query: 40 LCNCTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGV 99
C C+ QL+ + + + L P+ + +++ + R + +AL + M+ G
Sbjct: 126 FCRCS---QLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGY 182
Query: 100 LPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSA-R 158
P+ ++ +C+S ++ + + K G+ + I+ C SG ++ A R
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242
Query: 159 MV---FDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACG 215
MV P + ++NA+I + G +A + M R PD VT L
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 216 SVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDER----N 271
L ++ + D++ ++ L++ Y K +++ K+F M +R N
Sbjct: 303 MYSRLDEAEEMFG--FMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 272 VSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYF- 330
++T LI GY G +N A E F M GV PN +T+ +L GK+++
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420
Query: 331 DMMKNVYGITPRLQHYGCMVDLLGRAGLLDEA 362
DM KN G+ + Y ++ + +AG + +A
Sbjct: 421 DMQKN--GMDADIVTYNIIIRGMCKAGEVADA 450
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 152/383 (39%), Gaps = 60/383 (15%)
Query: 70 NWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQ----SFAIELGKQV 125
++ ++R R ++L L M++ LP +L A+ + I L +Q+
Sbjct: 48 DYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQM 107
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDE----NPDPKLGSWNAVIGGLSQ 181
LG+ L T C +N +C+ + + A + +P + ++ +++ G +
Sbjct: 108 QMLGIPHNLCT---CNI-LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCR 163
Query: 182 GGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI 241
G DA+ +F M G+ P+ +
Sbjct: 164 GDRVYDALYMFDQMVGMGYKPN-------------------------------------V 186
Query: 242 LMWNSLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLIVGYAMHGHVNEALECFWC 297
+++N+++D K ++D A + M++ +V ++ SLI G G ++A C
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSC 246
Query: 298 MREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAG 357
M + + P+ TF ++ ACV G+V E +++ M + P + Y ++ L
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIR-RSLDPDIVTYSLLIYGLCMYS 305
Query: 358 LLDEAMKMVEEMPMK---PNSIVWGCLM-GACETYGNVEMG-EYVAKHLQALEPWNDGAY 412
LDEA +M M K P+ + + L+ G C++ VE G + + Q N Y
Sbjct: 306 RLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKS-KKVEHGMKLFCEMSQRGVVRNTVTY 364
Query: 413 VVLSNIYANKGMWKEVERIRSSM 435
+L Y G E I M
Sbjct: 365 TILIQGYCRAGKLNVAEEIFRRM 387
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 163/391 (41%), Gaps = 65/391 (16%)
Query: 58 RTHFLESNPAPFNW-------NNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVL 110
R F+ S F + N +I+ + +L L + M G+ P YT ++
Sbjct: 170 RIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLM 229
Query: 111 KAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLG 170
+ + ++ ++V E E+G I P +
Sbjct: 230 NGLVSAMFVDSAERVF-----------EVMESGRIK--------------------PDIV 258
Query: 171 SWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCV 230
++N +I G + G + A+ +M G D +T +++ AC + D +CV
Sbjct: 259 TYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDF------GSCV 312
Query: 231 YHAKAAERTDILM----WNSLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLIVGY 282
+ + I + ++ ++ K G+++ Y VF M + NV+ +T LI GY
Sbjct: 313 ALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGY 372
Query: 283 AMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPR 342
A G V +A+ M + G +P+ VT+ V++ G+V+E YF + G+
Sbjct: 373 AKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCR-FDGLAIN 431
Query: 343 LQHYGCMVDLLGRAGLLDEAMKMVEEMPMK---PNSIVWGCLMGACETYGNVEMGEYVAK 399
Y ++D LG+AG +DEA ++ EEM K +S + L+ A + V+ + K
Sbjct: 432 SMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFK 491
Query: 400 HLQALEPWNDGAY---VVLSNIYANKGMWKE 427
++ E + Y ++LS GM+KE
Sbjct: 492 RMEEEEGCDQTVYTYTILLS------GMFKE 516
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 128/312 (41%), Gaps = 54/312 (17%)
Query: 90 LHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYC 149
L+ M G+ + +V+ +C+ + G V ++ G + N T I+ Y
Sbjct: 314 LYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYA 373
Query: 150 KSGEFTSA-----RMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDG 204
KSG A RM+ DE P + +++ V+ GL + G +A+ F
Sbjct: 374 KSGSVEDAIRLLHRMI-DEGFKPDVVTYSVVVNGLCKNGRVEEALDYF------------ 420
Query: 205 VTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVF 264
HTC + A + + ++SL+D GK GR+D A ++F
Sbjct: 421 ----------------------HTCRFDGLA---INSMFYSSLIDGLGKAGRVDEAERLF 455
Query: 265 ATMDE----RNVSSWTSLIVGYAMHGHVNEALECFWCM-REAGVRPNYVTFVGVLSACVH 319
M E R+ + +LI + H V+EA+ F M E G T+ +LS
Sbjct: 456 EEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFK 515
Query: 320 GGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWG 379
+ +E +DMM + GITP + + L +G + A K+++E+ P ++
Sbjct: 516 EHRNEEALKLWDMMID-KGITPTAACFRALSTGLCLSGKVARACKILDELA--PMGVI-- 570
Query: 380 CLMGACETYGNV 391
L ACE N
Sbjct: 571 -LDAACEDMINT 581
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/447 (22%), Positives = 183/447 (40%), Gaps = 40/447 (8%)
Query: 22 QTLLLDSANNPVTLIATQLCNCTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRL 81
TL+ +N LIA+QL LN++ + L +P +N +I +
Sbjct: 342 NTLINGFSNEGKVLIASQL--------LNEMLSFGL-------SPNHVTFNALIDGHISE 386
Query: 82 EAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCE 141
+ AL++ +M G+ P + ++L +C++ +L + + + G+
Sbjct: 387 GNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY 446
Query: 142 TGFINLYCKSGEFTSARMVFDE----NPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRR 197
TG I+ CK+G A ++ +E DP + +++A+I G + G + A + + R
Sbjct: 447 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR 506
Query: 198 HGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAE--RTDILMWNSLVDMYGKCG 255
G +P+G+ +L C +G L+ ++ +Y A E D +N LV K G
Sbjct: 507 VGLSPNGIIYSTLIYNCCRMGCLKEAIR----IYEAMILEGHTRDHFTFNVLVTSLCKAG 562
Query: 256 RMDLAYKVFATMDER----NVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFV 311
++ A + M N S+ LI GY G +A F M + G P + T+
Sbjct: 563 KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYG 622
Query: 312 GVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPM 371
+L GG ++E + + V + Y ++ + ++G L +A+ + EM
Sbjct: 623 SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVM-YNTLLTAMCKSGNLAKAVSLFGEMVQ 681
Query: 372 K---PNSIVWGCLMGACETYGNVEMGEYVAKHLQA---LEPWNDGAYVVLSNIYANKGMW 425
+ P+S + L+ G + AK +A + P N Y + G W
Sbjct: 682 RSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLP-NKVMYTCFVDGMFKAGQW 740
Query: 426 KEVERIRSSMKEGRLAKVPAYSLTTNS 452
K R M L P +TTN+
Sbjct: 741 KAGIYFREQMDN--LGHTPDI-VTTNA 764
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 138/340 (40%), Gaps = 52/340 (15%)
Query: 56 ILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQ 115
+ R + + +P ++ +I R+ + A+R++ M+ G D +T +++ ++C+
Sbjct: 501 VCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCK 560
Query: 116 SFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPD----PKLGS 171
+ + ++ G+ N IN Y SGE A VFDE P +
Sbjct: 561 AGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFT 620
Query: 172 WNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVY 231
+ +++ GL +GG R+A + ++
Sbjct: 621 YGSLLKGLCKGGHLREAEKFLKSL------------------------------------ 644
Query: 232 HAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNV----SSWTSLIVGYAMHGH 287
HA A D +M+N+L+ K G + A +F M +R++ ++TSLI G G
Sbjct: 645 HAVPAA-VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 703
Query: 288 VNEALECFWCMREA--GVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQH 345
A+ F EA V PN V + + G+ + G + + M N+ G TP +
Sbjct: 704 TVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL-GHTPDIVT 761
Query: 346 YGCMVDLLGRAGLLDEAMKMVEEMPMK---PNSIVWGCLM 382
M+D R G +++ ++ EM + PN + L+
Sbjct: 762 TNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILL 801
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 136/334 (40%), Gaps = 45/334 (13%)
Query: 52 VYAHILRTHFL-ESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVL 110
V+ ++ T+ L SNP+ ++ +IR Y R +++L + LM G P YT +L
Sbjct: 148 VFGALMTTYRLCNSNPSVYDI--LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAIL 205
Query: 111 KAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLG 170
+V +S G+ V + + C P +
Sbjct: 206 GSVVKS-----GEDVSVWSFLKEMLKRKIC--------------------------PDVA 234
Query: 171 SWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCV 230
++N +I L G + + M + G+AP VT ++ G + ++L +
Sbjct: 235 TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL---L 291
Query: 231 YHAKA-AERTDILMWNSLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLIVGYAMH 285
H K+ D+ +N L+ + R+ Y + M +R N ++ +LI G++
Sbjct: 292 DHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNE 351
Query: 286 GHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQH 345
G V A + M G+ PN+VTF ++ + G +E F MM+ G+TP
Sbjct: 352 GKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME-AKGLTPSEVS 410
Query: 346 YGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWG 379
YG ++D L + D A M MK N + G
Sbjct: 411 YGVLLDGLCKNAEFDLARGFY--MRMKRNGVCVG 442
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 123/276 (44%), Gaps = 11/276 (3%)
Query: 66 PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQV 125
P +N ++ Y++ + + L+ ++ G+LPD+ T ++ +C+S +E+G ++
Sbjct: 792 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 851
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGE----FTSARMVFDENPDPKLGSWNAVIGGLSQ 181
+ G++ + Y I+ C +GE F +++ + +A++ L++
Sbjct: 852 LKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 911
Query: 182 GGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI 241
+++ V M + G +P+ + L + VGD++ + + K
Sbjct: 912 NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPN-- 969
Query: 242 LMWNSLVDMYGKCGRMDLAYKVFATMDERN----VSSWTSLIVGYAMHGHVNEALECFWC 297
+ +++V KCG+ D A + M + ++S+T+L+ +G+V EALE
Sbjct: 970 VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVV 1029
Query: 298 MREAGVRPNYVTF-VGVLSACVHGGKVQEGRCYFDM 332
M G++ + V++ V + C G Y +M
Sbjct: 1030 MSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1065
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 132/343 (38%), Gaps = 23/343 (6%)
Query: 40 LCNCTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGV 99
LC H+ + + + H + + +N ++ + A+ L M++ +
Sbjct: 628 LCKGGHLREAEKFLKSL---HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 684
Query: 100 LPDRYTLPIVLKAVCQS----FAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFT 155
LPD YT ++ +C+ AI K+ + G + N+ T F++ K+G++
Sbjct: 685 LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG---NVLPNKVMYTCFVDGMFKAGQW- 740
Query: 156 SARMVFDENPD-----PKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSL 210
A + F E D P + + NA+I G S+ G + M P+ T L
Sbjct: 741 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 800
Query: 211 TSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDER 270
D+ L+ + D L +SLV + +++ K+ R
Sbjct: 801 LHGYSKRKDVSTSFLLYRSIILNGILP--DKLTCHSLVLGICESNMLEIGLKILKAFICR 858
Query: 271 NVS----SWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEG 326
V ++ LI +G +N A + M G+ + T ++S + QE
Sbjct: 859 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 918
Query: 327 RCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
R M GI+P + Y +++ L R G + A + EEM
Sbjct: 919 RMVLHEMSK-QGISPESRKYIGLINGLCRVGDIKTAFVVKEEM 960
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 152/340 (44%), Gaps = 19/340 (5%)
Query: 62 LESNPAP--FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAI 119
++S P P F +N ++ +++ + L M R G+ + YT I++ C+ I
Sbjct: 77 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 136
Query: 120 ELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPD----PKLGSWNAV 175
L + +K+G + + + +N YC + A + D+ + P ++ +
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 196
Query: 176 IGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKA 235
I GL A +A+ + M + G P+ VT + + GD+ L L + AK
Sbjct: 197 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 256
Query: 236 AERTDILMWNSLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLIVGYAMHGHVNEA 291
+++++++++D K D A +F M+ + NV +++SLI + ++A
Sbjct: 257 --EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDA 314
Query: 292 LECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEG-RCYFDMMKNVYGITPRLQHYGCMV 350
M E + PN VTF ++ A V GK+ E + Y +M+K I P + Y ++
Sbjct: 315 SRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR--SIDPDIFTYSSLI 372
Query: 351 DLLGRAGLLDEAMKMVEEMPMK---PNSIVWGCLM-GACE 386
+ LDEA M E M K PN + + L+ G C+
Sbjct: 373 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 144/330 (43%), Gaps = 51/330 (15%)
Query: 86 NALRLHVLMLRAGVLPDRYTLPIVLKAVCQ----SFAIELGKQVHSLGVKIGLQTNEYCE 141
+A+ L M+++ LP + +L A+ + I LG+++ LG+ N Y
Sbjct: 68 DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGI----SHNLYTY 123
Query: 142 TGFINLYCKSGEFTSARMVFDE----NPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRR 197
IN +C+ + + A + + +P + + ++++ G G DA+ + M
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 198 HGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAE-------------RTDILMW 244
G+ PD +T +L +H H KA+E + +++ +
Sbjct: 184 MGYRPDTITFTTL---------------IHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 245 NSLVDMYGKCGRMDLAYKVFATMD----ERNVSSWTSLIVGYAMHGHVNEALECFWCMRE 300
+V+ K G +DLA+ + M+ E NV ++++I + H ++AL F M
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 301 AGVRPNYVTFVGVLSA-CVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLL 359
GVRPN +T+ ++S C + R DM++ I P + + ++D + G L
Sbjct: 289 KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER--KINPNVVTFNALIDAFVKEGKL 346
Query: 360 DEAMKMVEEM---PMKPNSIVWGCLM-GAC 385
EA K+ +EM + P+ + L+ G C
Sbjct: 347 VEAEKLYDEMIKRSIDPDIFTYSSLINGFC 376
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 183/452 (40%), Gaps = 87/452 (19%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQ----SFAIELGKQ 124
+ +N +I C+ R AL L M++ G P TL +L C S A+ L Q
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 125 VHSLG-------------------------------VKIGLQTNEYCETGFINLYCKSGE 153
+ +G V+ G Q N +N CK G+
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 154 FTSARMVFDENPDPKLGS----WNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVS 209
A + ++ K+ + ++ VI L + DA+ +F M G P+ +T S
Sbjct: 241 IDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 300
Query: 210 LTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDE 269
L S + +L + + K +++ +N+L+D + K G++ A K++ M +
Sbjct: 301 LISCLCNYERWSDASRLLSDMIERKI--NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK 358
Query: 270 RNVS----SWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQE 325
R++ +++SLI G+ MH ++EA F M PN VT+ +++ ++ E
Sbjct: 359 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDE 418
Query: 326 GRCYF----------------------------DMMKNVY------GITPRLQHYGCMVD 351
G F D + V+ G+ P + Y ++D
Sbjct: 419 GVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478
Query: 352 LLGRAGLLDEAMKMVEEM---PMKPNSIVWGCLM-GACETYGNVEMG--EYVAKHLQALE 405
L + G L++AM + E + M+P + ++ G C+ G VE G + + L+ ++
Sbjct: 479 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA-GKVEDGWDLFCSLSLKGVK 537
Query: 406 PWNDGAYVVLSNIYANKGMWKEVERIRSSMKE 437
P + Y + + + KG+ +E + + M+E
Sbjct: 538 P-DVIIYNTMISGFCRKGLKEEADALFRKMRE 568
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 139/315 (44%), Gaps = 11/315 (3%)
Query: 66 PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQV 125
P + +N ++ + ++A+ + +ML+ G PD YT V+ +C+ ++ +V
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGEFTS----ARMVFDENPDPKLGSWNAVIGGLSQ 181
+ N I+ CK + AR++ + P + ++N++I GL
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 182 GGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI 241
R A+ +F MR G PD T L + S G L L + + + A +
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR--SV 470
Query: 242 LMWNSLVDMYGKCGRMDLAYKVFATMD----ERNVSSWTSLIVGYAMHGHVNEALECFWC 297
+ +N+L+D + K + A ++F M+ RN ++ +LI G V +A +
Sbjct: 471 ITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 530
Query: 298 MREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAG 357
M G +P+ T+ +L+ GG +++ M + G P + YG ++ L +AG
Sbjct: 531 MIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS-NGCEPDIVTYGTLISGLCKAG 589
Query: 358 LLDEAMKMVEEMPMK 372
++ A K++ + MK
Sbjct: 590 RVEVASKLLRSIQMK 604
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 135/316 (42%), Gaps = 14/316 (4%)
Query: 98 GVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSA 157
G PD+YT ++ +C++ ++ ++ + ++ G + Y I+ CK GE A
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349
Query: 158 RMVFDE----NPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSA 213
V D+ + P ++N +I L + +A + + G PD T SL
Sbjct: 350 VEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Query: 214 CGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMD----E 269
+ ++ ++L + +K E D +N L+D G++D A + M+
Sbjct: 410 LCLTRNHRVAMELFEEM-RSKGCE-PDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 270 RNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCY 329
R+V ++ +LI G+ EA E F M GV N VT+ ++ +V++
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Query: 330 FDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPM---KPNSIVWGCLMGACE 386
D M + G P Y ++ R G + +A +V+ M +P+ + +G L+
Sbjct: 528 MDQMI-MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC 586
Query: 387 TYGNVEMGEYVAKHLQ 402
G VE+ + + +Q
Sbjct: 587 KAGRVEVASKLLRSIQ 602
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 128/301 (42%), Gaps = 20/301 (6%)
Query: 86 NALRL----HVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCE 141
N+L+L H M G+ PD T +++KA+C++ + + GL +E
Sbjct: 168 NSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTF 227
Query: 142 TGFINLYCKSGEFTSARMVFDENPDPKLG-SW-----NAVIGGLSQGGLARDAIRVFVNM 195
T + Y + G+ A + ++ + G SW N ++ G + G DA+ M
Sbjct: 228 TTVMQGYIEEGDLDGALRIREQMVE--FGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM 285
Query: 196 -RRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKC 254
+ GF PD T +L + G ++ +++ + + D+ +NS++ K
Sbjct: 286 SNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVML--QEGYDPDVYTYNSVISGLCKL 343
Query: 255 GRMDLAYKVFATMDERNVS----SWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTF 310
G + A +V M R+ S ++ +LI V EA E + G+ P+ TF
Sbjct: 344 GEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTF 403
Query: 311 VGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMP 370
++ + F+ M++ G P Y ++D L G LDEA+ M+++M
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRS-KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462
Query: 371 M 371
+
Sbjct: 463 L 463
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 137/326 (42%), Gaps = 31/326 (9%)
Query: 20 ITQTLLLDSANNPVT---LIATQLCNCTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIR 76
+ Q + D + N VT LI+T LC + + ++ + L P +N++I+
Sbjct: 353 LDQMITRDCSPNTVTYNTLIST-LCKENQVEEATELARVLTSKGIL---PDVCTFNSLIQ 408
Query: 77 --CYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQ----SFAIELGKQVHSLGV 130
C TR R A+ L M G PD +T +++ ++C A+ + KQ+ G
Sbjct: 409 GLCLTR--NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLG----SWNAVIGGLSQGGLAR 186
+ T GF CK+ + A +FDE + ++N +I GL +
Sbjct: 467 ARSVITYNTLIDGF----CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVE 522
Query: 187 DAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNS 246
DA ++ M G PD T SL + GD++ + + DI+ + +
Sbjct: 523 DAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC--EPDIVTYGT 580
Query: 247 LVDMYGKCGRMDLAYKVFATMDERNVS----SWTSLIVGYAMHGHVNEALECFWCMREAG 302
L+ K GR+++A K+ ++ + ++ ++ +I G EA+ F M E
Sbjct: 581 LISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQN 640
Query: 303 -VRPNYVTFVGVLSA-CVHGGKVQEG 326
P+ V++ V C GG ++E
Sbjct: 641 EAPPDAVSYRIVFRGLCNGGGPIREA 666
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 116/280 (41%), Gaps = 14/280 (5%)
Query: 167 PKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQL 226
P + ++N +I L + R AI + +M +G PD T ++ GDL L++
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 227 HTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDER-----NVSSWTSLIVG 281
+ + + N +V + K GR++ A M + + ++ +L+ G
Sbjct: 247 REQMVEFGCSWSN--VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 282 YAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITP 341
GHV A+E M + G P+ T+ V+S G+V+E D M +P
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI-TRDCSP 363
Query: 342 RLQHYGCMVDLLGRAGLLDEAMKMVEEMPMK---PNSIVWGCLM-GACETYGN-VEMGEY 396
Y ++ L + ++EA ++ + K P+ + L+ G C T + V M +
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 397 VAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSMK 436
+ EP ++ Y +L + +KG E + M+
Sbjct: 424 EEMRSKGCEP-DEFTYNMLIDSLCSKGKLDEALNMLKQME 462
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 153/356 (42%), Gaps = 17/356 (4%)
Query: 62 LESNPAPFNWNNIIRCYTRLEAPRN---ALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFA 118
++S P P + + + +++ +N + L M G+ D Y+ IV+ +C+
Sbjct: 61 IQSRPLP-SIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 119
Query: 119 IELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPD----PKLGSWNA 174
+ V +K G + + + IN +C+ A + + + P + +N
Sbjct: 120 FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 179
Query: 175 VIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAK 234
+I G + GL DA+ +F M R G D VT SL + G +L +
Sbjct: 180 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 239
Query: 235 AAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLIVGYAMHGHVNE 290
+++ + +++D++ K G+ A K++ M R +V ++ SLI G MHG V+E
Sbjct: 240 IVP--NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDE 297
Query: 291 ALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMV 350
A + M G P+ VT+ +++ +V EG F M G+ Y ++
Sbjct: 298 AKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ-RGLVGDTITYNTII 356
Query: 351 DLLGRAGLLDEAMKMVEEMPMKPNSIVWGCLM-GACETYGNVEMGEYVAKHLQALE 405
+AG D A ++ M +PN + L+ G C + VE + +++Q E
Sbjct: 357 QGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNW-RVEKALVLFENMQKSE 411
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 134/325 (41%), Gaps = 30/325 (9%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQ 124
P + +I Y + + A L ML G LP+ T ++ C++ +E Q
Sbjct: 550 TPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQ 609
Query: 125 VHS--LGVK----IGLQTNEYCET----------GFINLYCKSGEFTSARMVFD----EN 164
+ G K + + +Y + ++ +CKS AR + D E
Sbjct: 610 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 669
Query: 165 PDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGL 224
+P ++A+I GL + G +A V M HGF T SL V L
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729
Query: 225 QLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLIV 280
++ + + A +++++ ++D K G+ D AYK+ M+E+ NV ++T++I
Sbjct: 730 KVLSKMLENSCA--PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Query: 281 GYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGIT 340
G+ M G + LE M GV PNYVT+ ++ C G + + MK + T
Sbjct: 788 GFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 847
Query: 341 P----RLQHYGCMVDLLGRAGLLDE 361
R G + + GLLDE
Sbjct: 848 HTAGYRKVIEGFNKEFIESLGLLDE 872
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 139/342 (40%), Gaps = 62/342 (18%)
Query: 87 ALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQ--------------------VH 126
A L M R G++ D YT I++ + C++ IE ++ +H
Sbjct: 502 AFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIH 561
Query: 127 S-LGVKIGLQTNEYCET--------------GFINLYCKSGEFTSARMVF---------- 161
+ L K NE ET I+ +CK+G+ A +F
Sbjct: 562 AYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP 621
Query: 162 ---------DENPD-PKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLT 211
D+N + P + ++ A++ G + +A ++ M G P+ + +L
Sbjct: 622 DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681
Query: 212 SACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDER- 270
VG L ++ T + ++ + ++SL+D Y K R DLA KV + M E
Sbjct: 682 DGLCKVGKLDEAQEVKTEM--SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 739
Query: 271 ---NVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGR 327
NV +T +I G G +EA + M E G +PN VT+ ++ GK++
Sbjct: 740 CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCL 799
Query: 328 CYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
+ M + G+ P Y ++D + G LD A ++EEM
Sbjct: 800 ELLERMGS-KGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 90/448 (20%), Positives = 171/448 (38%), Gaps = 104/448 (23%)
Query: 33 VTLIATQLCNCTHIHQLNQVYAHILRTHFLES-NPAPFNWNNIIRCYTRLEAPRNALRLH 91
V +T LC C + QL + +L +E P+P +N+++ Y A +L
Sbjct: 337 VVTYSTLLCGCLNKKQLGRC-KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395
Query: 92 VLMLRAGVLPDRYTLPIVLKAVC------QSFAIELGKQVHSLGVKIGLQTNEYCETGFI 145
M++ G +P I++ ++C ++L ++ +S + G+ N+ + F
Sbjct: 396 KKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFT 455
Query: 146 NLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGV 205
C +G++ A V E +IG GF PD
Sbjct: 456 RCLCSAGKYEKAFSVIRE-----------MIG--------------------QGFIPDTS 484
Query: 206 TMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFA 265
T ++ +++ +M+LA+ +F
Sbjct: 485 T-------------------------------------YSKVLNYLCNASKMELAFLLFE 507
Query: 266 TMDE----RNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGG 321
M +V ++T ++ + G + +A + F MRE G PN VT+ ++ A +
Sbjct: 508 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 567
Query: 322 KVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM------------ 369
KV F+ M + G P + Y ++D +AG +++A ++ E M
Sbjct: 568 KVSYANELFETMLS-EGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY 626
Query: 370 -------PMKPNSIVWGCLM-GACETYGNVEMGEYV-AKHLQALEPWNDGAYVVLSNIYA 420
+PN + +G L+ G C+++ E + + A ++ EP N Y L +
Sbjct: 627 FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEP-NQIVYDALIDGLC 685
Query: 421 NKGMWKEVERIRSSMKE-GRLAKVPAYS 447
G E + +++ M E G A + YS
Sbjct: 686 KVGKLDEAQEVKTEMSEHGFPATLYTYS 713
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 160/383 (41%), Gaps = 29/383 (7%)
Query: 66 PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQV 125
P +NN+I + + A+ + LM+ G+ T ++K C++ + +++
Sbjct: 363 PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 422
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDE----NPDPKLGSWNAVIGGLSQ 181
+ IG N+ T I L C F SA E N P G +I GL +
Sbjct: 423 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 482
Query: 182 GGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI 241
G A+ ++ GF D T +L G L ++ + D
Sbjct: 483 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCV--MDR 540
Query: 242 LMWNSLVDMYGKCG--RMDLAYKVFATMDERNVS----SWTSLIVGYAMHGHVNEALECF 295
+ +N+L+ G CG ++D A+ M +R + +++ LI G V EA++ F
Sbjct: 541 VSYNTLIS--GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ-F 597
Query: 296 W--CMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFD--MMKNVYGITPRLQHYGCMVD 351
W C R G+ P+ T+ ++ C + +EG+ +FD M KNV P Y ++
Sbjct: 598 WDDCKRN-GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV---QPNTVVYNHLIR 653
Query: 352 LLGRAGLLDEAMKMVEEMPMK---PNSIVWGCLMGACETYGNVEMGEYVAKH--LQALEP 406
R+G L A+++ E+M K PNS + L+ VE + + + ++ LEP
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 713
Query: 407 WNDGAYVVLSNIYANKGMWKEVE 429
N Y L + Y G +VE
Sbjct: 714 -NVFHYTALIDGYGKLGQMVKVE 735
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 45/239 (18%)
Query: 96 RAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFT 155
R G+LPD YT +++ C++ E G++ + +Q N I YC+SG +
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 156 SARMVFDENP----DPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLT 211
A + ++ P ++ ++I G+S +A +F MR G P+
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN-------- 714
Query: 212 SACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERN 271
V+H + +L+D YGK G+M + M +N
Sbjct: 715 ------------------VFH-----------YTALIDGYGKLGQMVKVECLLREMHSKN 745
Query: 272 VS----SWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEG 326
V ++T +I GYA G+V EA MRE G+ P+ +T+ + + G V E
Sbjct: 746 VHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 136/326 (41%), Gaps = 32/326 (9%)
Query: 86 NALRLHVLMLRAGVLPDRYTLPIVLKAVCQ----SFAIELGKQVHSLGVKIGLQTNEYCE 141
+ALR ML + P L ++ +C+ S A+EL Q + G + +T+
Sbjct: 453 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS---- 508
Query: 142 TGFINLYCKSGEFTSARMVFDENPDPKLG--------SWNAVIGGLSQGGLARDAIRVFV 193
++ C++G+ A + E LG S+N +I G +A
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKE----ILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 564
Query: 194 NMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQL-HTCVYHAKAAERTDILMWNSLVDMYG 252
M + G PD T L ++ ++ +Q C + D+ ++ ++D
Sbjct: 565 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC---KRNGMLPDVYTYSVMIDGCC 621
Query: 253 KCGRMDLAYKVFATMDERNVSS----WTSLIVGYAMHGHVNEALECFWCMREAGVRPNYV 308
K R + + F M +NV + LI Y G ++ ALE M+ G+ PN
Sbjct: 622 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 681
Query: 309 TFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEE 368
T+ ++ +V+E + F+ M+ + G+ P + HY ++D G+ G + + ++ E
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMR-MEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 740
Query: 369 MPMK---PNSIVWGCLMGACETYGNV 391
M K PN I + ++G GNV
Sbjct: 741 MHSKNVHPNKITYTVMIGGYARDGNV 766
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 107/246 (43%), Gaps = 20/246 (8%)
Query: 87 ALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKI-GLQTNEYCETGFI 145
AL + ++ G+ P + T I+L ++ + A E K + V G+ + Y T I
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVR--ANEFQKCCEAFDVVCKGVSPDVYLFTTAI 267
Query: 146 NLYCKSGEFTSARMVFDENPD----PKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFA 201
N +CK G+ A +F + + P + ++N VI GL G +A M G
Sbjct: 268 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 327
Query: 202 PDGVT---MVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMD 258
P +T +V + +GD L+ T K +++++N+L+D + + G ++
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMT-----KKGFPPNVIVYNNLIDSFIEAGSLN 382
Query: 259 LAYKVFATMDERNV----SSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVL 314
A ++ M + + S++ +LI GY +G + A M G N +F V+
Sbjct: 383 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Query: 315 S-ACVH 319
C H
Sbjct: 443 CLLCSH 448
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 13/173 (7%)
Query: 271 NVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYF 330
+V +T+ I + G V EA++ F M EAGV PN VTF V+ G+ E +
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 331 DMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMK---PNSIVWGCLMGACET 387
+ M G+ P L Y +V L RA + +A +++EM K PN IV+ L+ +
Sbjct: 319 EKMVE-RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 377
Query: 388 YGN----VEMGEY-VAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSM 435
G+ +E+ + V+K L Y L Y G ER+ M
Sbjct: 378 AGSLNKAIEIKDLMVSKGLS----LTSSTYNTLIKGYCKNGQADNAERLLKEM 426
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 106/272 (38%), Gaps = 30/272 (11%)
Query: 150 KSGEFTSARMVFD---ENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVT 206
++ EF FD + P + + I +GG +A+++F M G AP+ VT
Sbjct: 238 RANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVT 297
Query: 207 MVSLTSACGSVGDLQLGLQLHTCVYHAKAAER---TDILMWNSLVDMYGKCGRMDLAYKV 263
++ G G ++ K ER ++ ++ LV + R+ AY V
Sbjct: 298 FNTVIDGLGMCGRYD-----EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFV 352
Query: 264 FATMDER----NVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVH 319
M ++ NV + +LI + G +N+A+E M G+ T+ ++
Sbjct: 353 LKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCK 412
Query: 320 GGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWG 379
G+ M ++ G + ++ LL + D A++ V EM ++ S G
Sbjct: 413 NGQADNAERLLKEMLSI-GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGG 471
Query: 380 CLM----GACETYGNVEMGEYVAKHLQALEPW 407
L G C+ KH +ALE W
Sbjct: 472 LLTTLISGLCKH----------GKHSKALELW 493
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 160/383 (41%), Gaps = 29/383 (7%)
Query: 66 PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQV 125
P +NN+I + + A+ + LM+ G+ T ++K C++ + +++
Sbjct: 363 PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 422
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDE----NPDPKLGSWNAVIGGLSQ 181
+ IG N+ T I L C F SA E N P G +I GL +
Sbjct: 423 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 482
Query: 182 GGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI 241
G A+ ++ GF D T +L G L ++ + D
Sbjct: 483 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCV--MDR 540
Query: 242 LMWNSLVDMYGKCG--RMDLAYKVFATMDERNVS----SWTSLIVGYAMHGHVNEALECF 295
+ +N+L+ G CG ++D A+ M +R + +++ LI G V EA++ F
Sbjct: 541 VSYNTLIS--GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ-F 597
Query: 296 W--CMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFD--MMKNVYGITPRLQHYGCMVD 351
W C R G+ P+ T+ ++ C + +EG+ +FD M KNV P Y ++
Sbjct: 598 WDDCKRN-GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV---QPNTVVYNHLIR 653
Query: 352 LLGRAGLLDEAMKMVEEMPMK---PNSIVWGCLMGACETYGNVEMGEYVAKH--LQALEP 406
R+G L A+++ E+M K PNS + L+ VE + + + ++ LEP
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 713
Query: 407 WNDGAYVVLSNIYANKGMWKEVE 429
N Y L + Y G +VE
Sbjct: 714 -NVFHYTALIDGYGKLGQMVKVE 735
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 45/239 (18%)
Query: 96 RAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFT 155
R G+LPD YT +++ C++ E G++ + +Q N I YC+SG +
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 156 SARMVFDENP----DPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLT 211
A + ++ P ++ ++I G+S +A +F MR G P+
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN-------- 714
Query: 212 SACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERN 271
V+H + +L+D YGK G+M + M +N
Sbjct: 715 ------------------VFH-----------YTALIDGYGKLGQMVKVECLLREMHSKN 745
Query: 272 VS----SWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEG 326
V ++T +I GYA G+V EA MRE G+ P+ +T+ + + G V E
Sbjct: 746 VHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 136/326 (41%), Gaps = 32/326 (9%)
Query: 86 NALRLHVLMLRAGVLPDRYTLPIVLKAVCQ----SFAIELGKQVHSLGVKIGLQTNEYCE 141
+ALR ML + P L ++ +C+ S A+EL Q + G + +T+
Sbjct: 453 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS---- 508
Query: 142 TGFINLYCKSGEFTSARMVFDENPDPKLG--------SWNAVIGGLSQGGLARDAIRVFV 193
++ C++G+ A + E LG S+N +I G +A
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKE----ILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 564
Query: 194 NMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQL-HTCVYHAKAAERTDILMWNSLVDMYG 252
M + G PD T L ++ ++ +Q C + D+ ++ ++D
Sbjct: 565 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC---KRNGMLPDVYTYSVMIDGCC 621
Query: 253 KCGRMDLAYKVFATMDERNVSS----WTSLIVGYAMHGHVNEALECFWCMREAGVRPNYV 308
K R + + F M +NV + LI Y G ++ ALE M+ G+ PN
Sbjct: 622 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 681
Query: 309 TFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEE 368
T+ ++ +V+E + F+ M+ + G+ P + HY ++D G+ G + + ++ E
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMR-MEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 740
Query: 369 MPMK---PNSIVWGCLMGACETYGNV 391
M K PN I + ++G GNV
Sbjct: 741 MHSKNVHPNKITYTVMIGGYARDGNV 766
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 107/246 (43%), Gaps = 20/246 (8%)
Query: 87 ALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKI-GLQTNEYCETGFI 145
AL + ++ G+ P + T I+L ++ + A E K + V G+ + Y T I
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVR--ANEFQKCCEAFDVVCKGVSPDVYLFTTAI 267
Query: 146 NLYCKSGEFTSARMVFDENPD----PKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFA 201
N +CK G+ A +F + + P + ++N VI GL G +A M G
Sbjct: 268 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 327
Query: 202 PDGVT---MVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMD 258
P +T +V + +GD L+ T K +++++N+L+D + + G ++
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMT-----KKGFPPNVIVYNNLIDSFIEAGSLN 382
Query: 259 LAYKVFATMDERNV----SSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVL 314
A ++ M + + S++ +LI GY +G + A M G N +F V+
Sbjct: 383 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Query: 315 S-ACVH 319
C H
Sbjct: 443 CLLCSH 448
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 13/173 (7%)
Query: 271 NVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYF 330
+V +T+ I + G V EA++ F M EAGV PN VTF V+ G+ E +
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 331 DMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMK---PNSIVWGCLMGACET 387
+ M G+ P L Y +V L RA + +A +++EM K PN IV+ L+ +
Sbjct: 319 EKMVE-RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 377
Query: 388 YGN----VEMGEY-VAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSM 435
G+ +E+ + V+K L Y L Y G ER+ M
Sbjct: 378 AGSLNKAIEIKDLMVSKGLS----LTSSTYNTLIKGYCKNGQADNAERLLKEM 426
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 106/272 (38%), Gaps = 30/272 (11%)
Query: 150 KSGEFTSARMVFD---ENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVT 206
++ EF FD + P + + I +GG +A+++F M G AP+ VT
Sbjct: 238 RANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVT 297
Query: 207 MVSLTSACGSVGDLQLGLQLHTCVYHAKAAER---TDILMWNSLVDMYGKCGRMDLAYKV 263
++ G G ++ K ER ++ ++ LV + R+ AY V
Sbjct: 298 FNTVIDGLGMCGRYD-----EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFV 352
Query: 264 FATMDER----NVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVH 319
M ++ NV + +LI + G +N+A+E M G+ T+ ++
Sbjct: 353 LKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCK 412
Query: 320 GGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWG 379
G+ M ++ G + ++ LL + D A++ V EM ++ S G
Sbjct: 413 NGQADNAERLLKEMLSI-GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGG 471
Query: 380 CLM----GACETYGNVEMGEYVAKHLQALEPW 407
L G C+ KH +ALE W
Sbjct: 472 LLTTLISGLCKH----------GKHSKALELW 493
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 151/358 (42%), Gaps = 26/358 (7%)
Query: 94 MLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGE 153
ML + P +T +V+KA C I+ + K G N I+ K
Sbjct: 208 MLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR 267
Query: 154 FTSARMVFDEN------PDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTM 207
A + +E PD + ++N VI GL + +A ++ M GFAPD +T
Sbjct: 268 VNEALQLLEEMFLMGCVPDAE--TFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITY 325
Query: 208 VSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATM 267
L + +G + L + + +I+++N+L+ + GR+D A V + M
Sbjct: 326 GYLMNGLCKIGRVDAAKDLFYRI------PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDM 379
Query: 268 DER-----NVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGK 322
+V ++ SLI GY G V ALE MR G +PN ++ ++ GK
Sbjct: 380 VTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGK 439
Query: 323 VQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPM---KPNSIVWG 379
+ E + M + G+ P + C++ + + EA+++ EMP KP+ +
Sbjct: 440 IDEAYNVLNEM-SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFN 498
Query: 380 CLM-GACETYGNVEMGEYVAKHLQALE-PWNDGAYVVLSNIYANKGMWKEVERIRSSM 435
L+ G CE ++ ++ + + + N Y L N + +G KE ++ + M
Sbjct: 499 SLISGLCEV-DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 555
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 130/311 (41%), Gaps = 12/311 (3%)
Query: 66 PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAI-ELGKQ 124
P + +I ++ AL+L M G +PD T V+ +C+ I E K
Sbjct: 250 PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKM 309
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQGGL 184
V+ + ++ G ++ +N CK G +A+ +F P P++ +N +I G G
Sbjct: 310 VNRMLIR-GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGR 368
Query: 185 ARDAIRVFVNM-RRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILM 243
DA V +M +G PD T SL G +GL L + ++
Sbjct: 369 LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEG--LVGLALEVLHDMRNKGCKPNVYS 426
Query: 244 WNSLVDMYGKCGRMDLAYKVFATMD----ERNVSSWTSLIVGYAMHGHVNEALECFWCMR 299
+ LVD + K G++D AY V M + N + LI + + EA+E F M
Sbjct: 427 YTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMP 486
Query: 300 EAGVRPNYVTFVGVLSACVHGGKVQEGRCYF-DMMKNVYGITPRLQHYGCMVDLLGRAGL 358
G +P+ TF ++S +++ DM+ G+ Y +++ R G
Sbjct: 487 RKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE--GVVANTVTYNTLINAFLRRGE 544
Query: 359 LDEAMKMVEEM 369
+ EA K+V EM
Sbjct: 545 IKEARKLVNEM 555
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 134/311 (43%), Gaps = 20/311 (6%)
Query: 87 ALRLHVL--MLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGF 144
L L VL M G P+ Y+ I++ C+ I+ V + GL+ N
Sbjct: 406 GLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465
Query: 145 INLYCKSGEFTSARMVFDENP----DPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGF 200
I+ +CK A +F E P P + ++N++I GL + + A+ + +M G
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525
Query: 201 APDGVTMVSLTSACGSVGDLQLGLQL-HTCVYHAKAAERTDILMWNSLVDMYGKCGRMDL 259
+ VT +L +A G+++ +L + V+ D + +NSL+ + G +D
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSP---LDEITYNSLIKGLCRAGEVDK 582
Query: 260 AYKVFATM-----DERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVL 314
A +F M N+S LI G G V EA+E M G P+ VTF ++
Sbjct: 583 ARSLFEKMLRDGHAPSNISC-NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 641
Query: 315 SACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVE---EMPM 371
+ G++++G F ++ GI P + ++ L + G + +A +++ E
Sbjct: 642 NGLCRAGRIEDGLTMFRKLQ-AEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGF 700
Query: 372 KPNSIVWGCLM 382
PN W L+
Sbjct: 701 VPNHRTWSILL 711
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/362 (20%), Positives = 157/362 (43%), Gaps = 18/362 (4%)
Query: 55 HILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVC 114
++R+ F E+ P+ + +N ++ + L+ M+ G+ P YT ++++A+C
Sbjct: 99 QLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALC 158
Query: 115 QSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSG------EFTSARMVFDENPDPK 168
S ++ +++ + G + NE+ + YCK+G E +A F P+
Sbjct: 159 DSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKV 218
Query: 169 LGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHT 228
+ +N ++ + G D+ ++ MR G PD VT S SA G + ++ +
Sbjct: 219 I--YNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFS 276
Query: 229 CVYHAK--AAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERN----VSSWTSLIVGY 282
+ + R + + +N ++ + K G ++ A +F ++ E + + S+ + G
Sbjct: 277 DMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGL 336
Query: 283 AMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPR 342
HG EA M + G+ P+ ++ ++ G + + + +MK G+ P
Sbjct: 337 VRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR-NGVCPD 395
Query: 343 LQHYGCMVDLLGRAGLLDEAMKMVEEMPMK---PNSIVWGCLMGACETYGNVEMGEYVAK 399
YGC++ G +D A +++EM PN+ L+ + G + E + +
Sbjct: 396 AVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLR 455
Query: 400 HL 401
+
Sbjct: 456 KM 457
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/385 (20%), Positives = 157/385 (40%), Gaps = 27/385 (7%)
Query: 66 PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQV 125
P+ +++N ++ +L +A + LM R GV PD T +L C ++ K +
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLG----SWNAVIGGLSQ 181
++ N Y ++ K G + A + + + G + N ++ GL
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478
Query: 182 GGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI 241
G AI + MR HG ++A G++G+ +GL + + + D+
Sbjct: 479 SGELDKAIEIVKGMRVHG-----------SAALGNLGNSYIGLVDDSLIENNCLP---DL 524
Query: 242 LMWNSLVDMYGKCGRMDLAYKVFATMDERNVS----SWTSLIVGYAMHGHVNEALECFWC 297
+ +++L++ K GR A +FA M + ++ I + G ++ A
Sbjct: 525 ITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKD 584
Query: 298 MREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAG 357
M + G + T+ ++ ++ E D MK GI+P + Y + L
Sbjct: 585 MEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKE-KGISPNICTYNTAIQYLCEGE 643
Query: 358 LLDEAMKMVEEMPMK---PNSIVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVV 414
+++A +++EM K PN + L+ A + +M + V + ++ +G Y +
Sbjct: 644 KVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSL 703
Query: 415 LSN-IYANKGMWKEVERIRSSMKEG 438
+ N + A + K E + + + G
Sbjct: 704 MFNELLAAGQLLKATELLEAVLDRG 728
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 157/371 (42%), Gaps = 45/371 (12%)
Query: 66 PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQV 125
P + ++I Y R + R L V M + ++ YT V+K +C S ++ +
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPD----PKLGSWNAVIGGLSQ 181
+ G + N T I + ++ F A V E + P + +N++I GLS+
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 182 GGLARDAIRVFVNMRRHGFAPDGVTMVSLTSA-------------------CGSVGDLQL 222
+A V M +G P+ T + S CG + + L
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559
Query: 223 --GLQLHTC----VYHAKAAERT--------DILMWNSLVDMYGKCGRMDLAYKVFATMD 268
GL C V A +A R+ D + L++ K ++D A ++F M
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619
Query: 269 ER----NVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQ 324
+ +V S+ LI G++ G++ +A F M E G+ PN + + +L G+++
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679
Query: 325 EGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMK---PNSIVWGCL 381
+ + D M +V G+ P Y ++D ++G L EA ++ +EM +K P+S V+ L
Sbjct: 680 KAKELLDEM-SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738
Query: 382 MGACETYGNVE 392
+ C +VE
Sbjct: 739 VDGCCRLNDVE 749
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 142/338 (42%), Gaps = 26/338 (7%)
Query: 98 GVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSA 157
G+ PD ++ +++ + ++ + V+ GL N + +C+SGE A
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKA 681
Query: 158 RMVFDENP----DPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSA 213
+ + DE P ++ +I G + G +A R+F M+ G PD +L
Sbjct: 682 KELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741
Query: 214 CGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKV--------FA 265
C + D++ + + A+ +N+L++ K G+ +L +V F
Sbjct: 742 CCRLNDVERAITIFGTNKKGCASSTAP---FNALINWVFKFGKTELKTEVLNRLMDGSFD 798
Query: 266 TMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQE 325
+ N ++ +I G++ A E F M+ A + P +T+ +L+ G+ E
Sbjct: 799 RFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAE 858
Query: 326 GRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKPNSIVWGC----- 380
FD GI P Y +++ + G+ +A+ +V++M K N++ GC
Sbjct: 859 MFPVFDEAIAA-GIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK-NAVDDGCKLSIS 916
Query: 381 ----LMGACETYGNVEMGEYVAKHLQALEPWNDGAYVV 414
L+ G +E+ E V +++ L+ D A V+
Sbjct: 917 TCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVI 954
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/451 (19%), Positives = 158/451 (35%), Gaps = 81/451 (17%)
Query: 66 PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQV 125
P + ++ +I +++ +A L V M GV D +T +++ + + + K +
Sbjct: 275 PLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGL 334
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFD----ENPDPKLGSWNAVIGGLSQ 181
V G+ Y I + K G A+ +FD P+ ++ ++I G +
Sbjct: 335 VHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCR 394
Query: 182 GGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDL--------------------- 220
R + V M++ T ++ S GDL
Sbjct: 395 EKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVI 454
Query: 221 ------------QLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMD 268
+ G + + DI +NSL+ K RMD A M
Sbjct: 455 YTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV 514
Query: 269 ER----NVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQ 324
E N ++ + I GY A + MRE GV PN V G+++ GKV
Sbjct: 515 ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 325 E----------------GRCYFDMMKNVY------------------GITPRLQHYGCMV 350
E + Y +M ++ GI P + YG ++
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 351 DLLGRAGLLDEAMKMVEEM---PMKPNSIVWGCLMGACETYGNVEMGEYVAKHL--QALE 405
+ + G + +A + +EM + PN I++ L+G G +E + + + + L
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 406 PWNDGAYVVLSNIYANKGMWKEVERIRSSMK 436
P N Y + + Y G E R+ MK
Sbjct: 695 P-NAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 104 YTLPIVLKAVCQSFAIELGKQVHSLGVKIGL--QTNEYCETGFINLYCKSGEF---TSAR 158
+ L VLKA ELGKQVH+L K+G + + Y I Y GEF A
Sbjct: 194 WILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFY---GEFRCLEDAN 250
Query: 159 MVFDENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVG 218
+V + + +W A + + G ++ IR F+ M HG + ++ AC V
Sbjct: 251 LVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVS 310
Query: 219 DL-QLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVF-ATMDERNVSSWT 276
D + G Q+H K +D L+ L++MYGK G++ A KVF ++ DE +VS W
Sbjct: 311 DGGRSGQQVHANAI--KLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWN 368
Query: 277 SLIVGYAMHGHVNEALECFWCMREAGVRPN 306
+++ Y +G EA++ + M+ G++ +
Sbjct: 369 AMVASYMQNGIYIEAIKLLYQMKATGIKAH 398
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 81/200 (40%), Gaps = 9/200 (4%)
Query: 126 HSLGVKIGLQTNEYCETGFIN----LYCKSGEFTSARMVFDENPDPKLGSWNAVIGGLSQ 181
H L V I ++++ FIN ++ G R +FD P SW V G +
Sbjct: 108 HELQVHI-MKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIE 166
Query: 182 GGLARDAIRVFVNMRRH----GFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAE 237
G DA +FV+M +H F + + AC + D +LG Q+H + +
Sbjct: 167 MGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFID 226
Query: 238 RTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWC 297
D + SL+ YG+ ++ A V + N +W + + G E + F
Sbjct: 227 EEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIE 286
Query: 298 MREAGVRPNYVTFVGVLSAC 317
M G++ N F VL AC
Sbjct: 287 MGNHGIKKNVSVFSNVLKAC 306
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 159/378 (42%), Gaps = 21/378 (5%)
Query: 48 QLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLP 107
+ ++ Y+ + R S P+ +N I+ C ++ AL++ M + P+ T
Sbjct: 323 KFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYN 381
Query: 108 IVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENP-- 165
I++ +C++ ++ ++ K GL N ++ CKS + A +F+E
Sbjct: 382 ILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK 441
Query: 166 --DPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLG 223
P ++ ++I GL + G DA +V+ M + + SL + G + G
Sbjct: 442 VCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDG 501
Query: 224 LQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLI 279
+++ + + + D+ + N+ +D K G + +F + R + S++ LI
Sbjct: 502 HKIYKDMINQNCS--PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILI 559
Query: 280 VGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGI 339
G G NE E F+ M+E G + + V+ GKV + + MK G
Sbjct: 560 HGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK-TKGF 618
Query: 340 TPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKP---NSIVWGCLMGACETYGNVEMGEY 396
P + YG ++D L + LDEA + EE K N +++ L+ G ++
Sbjct: 619 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYL 678
Query: 397 VAKHL--QALEP----WN 408
+ + L + L P WN
Sbjct: 679 ILEELMQKGLTPNLYTWN 696
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 158/374 (42%), Gaps = 25/374 (6%)
Query: 33 VTLIATQLCNCTHIHQLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHV 92
V ++ +LC +L++ A + P + ++I ++ +A +++
Sbjct: 415 VNIMVDRLCKS---QKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYE 471
Query: 93 LMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSG 152
ML + + ++K E G +++ + + +++ K+G
Sbjct: 472 KMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAG 531
Query: 153 EFTSARMVFDENPD----PKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVT-- 206
E R +F+E P S++ +I GL + G A + +F +M+ G D
Sbjct: 532 EPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYN 591
Query: 207 -MVSLTSACGSVGD-LQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVF 264
++ CG V QL ++ T K E T ++ + S++D K R+D AY +F
Sbjct: 592 IVIDGFCKCGKVNKAYQLLEEMKT-----KGFEPT-VVTYGSVIDGLAKIDRLDEAYMLF 645
Query: 265 ATMD----ERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHG 320
E NV ++SLI G+ G ++EA + + G+ PN T+ +L A V
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKA 705
Query: 321 GKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMP---MKPNSIV 377
++ E F MK + TP YG +++ L + ++A +EM MKP++I
Sbjct: 706 EEINEALVCFQSMKEL-KCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTIS 764
Query: 378 WGCLMGACETYGNV 391
+ ++ GN+
Sbjct: 765 YTTMISGLAKAGNI 778
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 128/318 (40%), Gaps = 18/318 (5%)
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLGS----WNAVIGGLSQGGLAR 186
++G + + T I + K G SA + DE L + +N I + G
Sbjct: 196 ELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVD 255
Query: 187 DAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTD-ILMWN 245
A + F + +G PD VT S+ L +++ H + R +N
Sbjct: 256 MAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFE---HLEKNRRVPCTYAYN 312
Query: 246 SLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLIVGYAMHGHVNEALECFWCMREA 301
+++ YG G+ D AY + + +V ++ ++ G V+EAL+ F M++
Sbjct: 313 TMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD 372
Query: 302 GVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDE 361
PN T+ ++ GK+ D M+ G+ P ++ MVD L ++ LDE
Sbjct: 373 AA-PNLSTYNILIDMLCRAGKLDTAFELRDSMQKA-GLFPNVRTVNIMVDRLCKSQKLDE 430
Query: 362 AMKMVEEMPMK---PNSIVWGCLMGACETYGNVEMGEYV-AKHLQALEPWNDGAYVVLSN 417
A M EEM K P+ I + L+ G V+ V K L + N Y L
Sbjct: 431 ACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIK 490
Query: 418 IYANKGMWKEVERIRSSM 435
+ N G ++ +I M
Sbjct: 491 NFFNHGRKEDGHKIYKDM 508
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 97/242 (40%), Gaps = 43/242 (17%)
Query: 167 PKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQL 226
P ++ +IG S + + +F M+ G+ P +L G + L L
Sbjct: 166 PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSL 225
Query: 227 HTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMD------------------ 268
+ ++ DI+++N +D +GK G++D+A+K F ++
Sbjct: 226 LDEM--KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVL 283
Query: 269 ----------------ERN-----VSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNY 307
E+N ++ ++I+GY G +EA R G P+
Sbjct: 284 CKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSV 343
Query: 308 VTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVE 367
+ + +L+ GKV E F+ MK P L Y ++D+L RAG LD A ++ +
Sbjct: 344 IAYNCILTCLRKMGKVDEALKVFEEMKK--DAAPNLSTYNILIDMLCRAGKLDTAFELRD 401
Query: 368 EM 369
M
Sbjct: 402 SM 403
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 186/439 (42%), Gaps = 54/439 (12%)
Query: 48 QLNQVYAHILRTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLP 107
QL+ A + + L P+ N+++ + A+ L M+ G PD T
Sbjct: 115 QLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFT 174
Query: 108 IVLKAVCQ-SFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPD 166
++ + Q + A E V + VK G Q + IN CK GE A + ++
Sbjct: 175 TLVHGLFQHNKASEAVALVERMVVK-GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK 233
Query: 167 PKLGS----WNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQL 222
K+ + ++ VI L + DA+ +F M G PD T SL S + G
Sbjct: 234 GKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD 293
Query: 223 GLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSL 278
+L + + K +++ +NSL+D + K G++ A K+F M +R N+ ++ SL
Sbjct: 294 ASRLLSDMLERKI--NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 351
Query: 279 IVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYF-------- 330
I G+ MH ++EA + F M P+ VT+ +++ KV +G F
Sbjct: 352 INGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGL 411
Query: 331 --------------------DMMKNVY------GITPRLQHYGCMVDLLGRAGLLDEAMK 364
D + V+ G+ P + Y ++D L + G L++AM
Sbjct: 412 VGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMV 471
Query: 365 MVEEM---PMKPNSIVWGCLM-GACETYGNVEMG--EYVAKHLQALEPWNDGAYVVLSNI 418
+ E + M+P+ + + G C+ G VE G + + L+ ++P + AY + +
Sbjct: 472 VFEYLQKSKMEPDIYTYNIMSEGMCKA-GKVEDGWDLFCSLSLKGVKP-DVIAYNTMISG 529
Query: 419 YANKGMWKEVERIRSSMKE 437
+ KG+ +E + MKE
Sbjct: 530 FCKKGLKEEAYTLFIKMKE 548
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 144/339 (42%), Gaps = 15/339 (4%)
Query: 66 PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQV 125
P+ ++ ++ +++ + M GV + YT I++ +C+ + +
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPD----PKLGSWNAVIGGLSQ 181
+K+G + +N +C + A + D+ + P ++ ++ GL Q
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 182
Query: 182 GGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI 241
A +A+ + M G PD VT ++ + G+ L L L + K D+
Sbjct: 183 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKI--EADV 240
Query: 242 LMWNSLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLIVGYAMHGHVNEALECFWC 297
+++++++D K +D A +F MD + +V +++SLI +G ++A
Sbjct: 241 VIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 300
Query: 298 MREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAG 357
M E + PN VTF ++ A GK+ E FD M I P + Y +++
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ-RSIDPNIVTYNSLINGFCMHD 359
Query: 358 LLDEAMKMVEEMPMK---PNSIVWGCLM-GACETYGNVE 392
LDEA ++ M K P+ + + L+ G C+ V+
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 148/345 (42%), Gaps = 22/345 (6%)
Query: 66 PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQV 125
P +N +I Y+ A L M G P YT V+ +C+ E K+V
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDE----NPDPKLGSWNAVIGGLSQ 181
+ ++ GL + + CK G+ VF + + P L +++++ ++
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 182 GGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI 241
G A+ F +++ G PD V L G + + + L + A D+
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCA--MDV 445
Query: 242 LMWNSLVDMYGKCGRMDL--AYKVFATMDER----NVSSWTSLIVGYAMHGHVNEALECF 295
+ +N++ ++G C R L A K+F M ER + + T LI G+ G++ A+E F
Sbjct: 446 VTYNTI--LHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 296 WCMREAGVRPNYVTFVGVLSACVHGGKVQEGR-CYFDMMKNVYGITPRLQHYGCMVDLLG 354
M+E +R + VT+ +L G + + + DM+ I P Y +V+ L
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK--EILPTPISYSILVNALC 561
Query: 355 RAGLLDEAMKMVEEM---PMKPNSIVWGCLM-GACETYGNVEMGE 395
G L EA ++ +EM +KP ++ ++ G C + GN GE
Sbjct: 562 SKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRS-GNASDGE 605
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/420 (18%), Positives = 162/420 (38%), Gaps = 52/420 (12%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQ 124
+P + +N +I + A + MLR+G+ PD T +L C+ + ++
Sbjct: 302 SPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEK 361
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKL--------------- 169
V S + + C + ++L+ +SG A M F+ + L
Sbjct: 362 VFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYC 421
Query: 170 ------------------------GSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGV 205
++N ++ GL + + +A ++F M PD
Sbjct: 422 RKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSY 481
Query: 206 TMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFA 265
T+ L +G+LQ ++L + + R D++ +N+L+D +GK G +D A +++A
Sbjct: 482 TLTILIDGHCKLGNLQNAMELFQKMKEKRI--RLDVVTYNTLLDGFGKVGDIDTAKEIWA 539
Query: 266 TMDERNV----SSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGG 321
M + + S++ L+ GH+ EA + M ++P + ++ G
Sbjct: 540 DMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSG 599
Query: 322 KVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMP-----MKPNSI 376
+G + + M + G P Y ++ R + +A +V++M + P+
Sbjct: 600 NASDGESFLEKMIS-EGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVF 658
Query: 377 VWGCLM-GACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSM 435
+ ++ G C E + K ++ + Y + N + ++ E RI M
Sbjct: 659 TYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEM 718
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 147/352 (41%), Gaps = 15/352 (4%)
Query: 96 RAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFT 155
R+GV + YTL I++ A+C+ +E S + G+ + I+ Y G
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 156 SARMVFDENP----DPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLT 211
A + + P P + ++N VI GL + G A VF M R G +PD T SL
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 212 SACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERN 271
GD+ ++ + + D++ ++S++ ++ + G +D A F ++ E
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVV--PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 272 VSS----WTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGR 327
+ +T LI GY G ++ A+ M + G + VT+ +L + E
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 328 CYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMKP---NSIVWGCLMGA 384
F+ M + P ++D + G L AM++ ++M K + + + L+
Sbjct: 466 KLFNEMTE-RALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDG 524
Query: 385 CETYGNVEMGEYVAKHLQALEPW-NDGAYVVLSNIYANKGMWKEVERIRSSM 435
G+++ + + + + E +Y +L N +KG E R+ M
Sbjct: 525 FGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEM 576
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 97/249 (38%), Gaps = 8/249 (3%)
Query: 66 PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQV 125
P + +I + +L +NA+ L M + D T +L + I+ K++
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Query: 126 HSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDE----NPDPKLGSWNAVIGGLSQ 181
+ V + + +N C G A V+DE N P + N++I G +
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCR 597
Query: 182 GGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI 241
G A D M GF PD ++ +L ++ L + + D+
Sbjct: 598 SGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDV 657
Query: 242 LMWNSLVDMYGKCGRMDLAYKVFATMDERNV----SSWTSLIVGYAMHGHVNEALECFWC 297
+NS++ + + +M A V M ER V S++T +I G+ ++ EA
Sbjct: 658 FTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDE 717
Query: 298 MREAGVRPN 306
M + G P+
Sbjct: 718 MLQRGFSPD 726
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 148/351 (42%), Gaps = 49/351 (13%)
Query: 64 SNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGK 123
S +++ ++R +A+ L +M ++ P +L A+ + +L
Sbjct: 39 SGKTSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDL-- 96
Query: 124 QVHSLGVK---IGLQTNEYCETGFINLYCKSGEFTSARMVFDE----NPDPKLGSWNAVI 176
V S G K +G+ N Y IN +C+ + A + + +P + + N+++
Sbjct: 97 -VISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLL 155
Query: 177 GGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAA 236
G G DA+ + M G+ PD VT +L +H H KA+
Sbjct: 156 NGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTL---------------IHGLFLHNKAS 200
Query: 237 E-------------RTDILMWNSLVDMYGKCGRMDLAYKVFATMD----ERNVSSWTSLI 279
E + D++ + ++V+ K G DLA + M+ E NV ++++I
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 280 VGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSA-CVHGGKVQEGRCYFDMMKNVYG 338
+ H ++AL F M GVRPN +T+ ++S C +G R DM++
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER--K 318
Query: 339 ITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM---PMKPNSIVWGCLM-GAC 385
I P L + ++D + G L +A K+ EEM + PN + L+ G C
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFC 369
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 105/233 (45%), Gaps = 11/233 (4%)
Query: 133 GLQTNEYCETGFINLYCKSGEFTSA-RMVFD---ENPDPKLGSWNAVIGGLSQGGLARDA 188
G++ N + I+ C G ++ A R++ D +P L +++A+I + G A
Sbjct: 283 GVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKA 342
Query: 189 IRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLV 248
+++ M + P+ T SL + + L Q+ + +++ +N+L+
Sbjct: 343 EKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLP--NVVTYNTLI 400
Query: 249 DMYGKCGRMDLAYKVFATMDER----NVSSWTSLIVGYAMHGHVNEALECFWCMREAGVR 304
+ + K R+D ++F M +R N ++T+LI G+ + A F M GV
Sbjct: 401 NGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 460
Query: 305 PNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAG 357
PN +T+ +L GK+ + F+ ++ + P + Y M++ + +AG
Sbjct: 461 PNILTYNILLDGLCKNGKLAKAMVVFEYLQR-STMEPDIYTYNIMIEGMCKAG 512
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 76/163 (46%), Gaps = 4/163 (2%)
Query: 65 NPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQ 124
+P F ++++I + L+ A ++ LM+R LP+ T ++ C++ ++ G +
Sbjct: 355 DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGME 414
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDE----NPDPKLGSWNAVIGGLS 180
+ + GL N T I+ + ++ + +A+MVF + P + ++N ++ GL
Sbjct: 415 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 474
Query: 181 QGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLG 223
+ G A+ VF ++R PD T + G ++G
Sbjct: 475 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 148/338 (43%), Gaps = 19/338 (5%)
Query: 64 SNPAP--FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIEL 121
S P P +++ + R + L L M G+ + YTL I++ C+ + L
Sbjct: 66 SRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSL 125
Query: 122 GKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPD----PKLGSWNAVIG 177
+K+G + + + IN C G + A + D + P L + NA++
Sbjct: 126 AFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVN 185
Query: 178 GLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAE 237
GL G DA+ + M GF P+ VT + G L ++L + K
Sbjct: 186 GLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKI-- 243
Query: 238 RTDILMWNSLVDMYGKCGRMDLAYKVFATMD----ERNVSSWTSLIVGYAMHGHVNEALE 293
+ D + ++ ++D K G +D A+ +F M+ + ++ +T+LI G+ G ++ +
Sbjct: 244 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAK 303
Query: 294 CFWCMREAGVRPNYVTFVGVLSACVHGGKVQEG-RCYFDMMKNVYGITPRLQHYGCMVDL 352
M + + P+ V F ++ V GK++E + +M++ GI+P Y ++D
Sbjct: 304 LLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR--GISPDTVTYTSLIDG 361
Query: 353 LGRAGLLDEAMKMVEEMPMK---PNSIVWGCLM-GACE 386
+ LD+A M++ M K PN + L+ G C+
Sbjct: 362 FCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCK 399
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 124/288 (43%), Gaps = 19/288 (6%)
Query: 94 MLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGE 153
M++ + PD ++ + + +++H ++ G+ + T I+ +CK +
Sbjct: 308 MIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 154 FTSARMVFD----ENPDPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVS 209
A + D + P + ++N +I G + L D + +F M G D VT +
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 210 LTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMD- 268
L +G L++ +L + + R DI+ + L+D G + A ++F ++
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRV--RPDIVSYKILLDGLCDNGEPEKALEIFEKIEK 485
Query: 269 ---ERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQE 325
E ++ + +I G V++A + F + GV+P+ T+ ++ G + E
Sbjct: 486 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSE 545
Query: 326 GRCYFDMMKNVYGITPRLQHYGCMVDLLGRA----GLLDEAMKMVEEM 369
F M+ G +P GC ++L RA G ++ K++EE+
Sbjct: 546 ADLLFRKMEE-DGHSPN----GCTYNILIRAHLGEGDATKSAKLIEEI 588
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 147/362 (40%), Gaps = 53/362 (14%)
Query: 94 MLRAGVLPDRYTLPIVLKAVCQ----SFAIELGKQVHSLG-------------------- 129
+++ G PD T ++ +C S A+EL ++ +G
Sbjct: 133 IIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGK 192
Query: 130 -----------VKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDPKLG----SWNA 174
V+ G Q NE + + CKSG+ A + + + K+ ++
Sbjct: 193 VSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSI 252
Query: 175 VIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAK 234
+I GL + G +A +F M GF D + +L G G +L + K
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 235 AAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDERNVS----SWTSLIVGYAMHGHVNE 290
D++ +++L+D + K G++ A ++ M +R +S ++TSLI G+ +++
Sbjct: 313 IT--PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 370
Query: 291 ALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMV 350
A M G PN TF +++ + +G F M ++ G+ Y ++
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM-SLRGVVADTVTYNTLI 429
Query: 351 DLLGRAGLLDEAMKMVEEM---PMKPNSIVWGCLM-GAC---ETYGNVEMGEYVAKHLQA 403
G L+ A ++ +EM ++P+ + + L+ G C E +E+ E + K
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Query: 404 LE 405
L+
Sbjct: 490 LD 491
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 91/208 (43%), Gaps = 11/208 (5%)
Query: 187 DAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNS 246
DA+ +F M R P + L S Q L L C ++ +
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTK--QYDLVLDLCKQMELKGIAHNLYTLSI 112
Query: 247 LVDMYGKCGRMDLAY----KVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAG 302
+++ +C ++ LA+ K+ E + ++++LI G + G V+EALE M E G
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Query: 303 VRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLL---GRAGLL 359
+P +T +++ GKV + D M G P YG ++ ++ G+ L
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVET-GFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 360 DEAMKMVEEMPMKPNSIVWGCLM-GACE 386
E ++ +EE +K +++ + ++ G C+
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCK 259
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 146/363 (40%), Gaps = 33/363 (9%)
Query: 61 FLESNPAP--FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFA 118
+E P P +NN+I + + A M+ G+ PD YT ++ C+
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM 336
Query: 119 IELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDE----NPDPKLGSWNA 174
++L +++ V G +++ I+ C GE A +F+E P + +N
Sbjct: 337 VQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNT 396
Query: 175 VIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAK 234
+I GLS G+ +A ++ M G P+ T L + +G CV A
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMG----------CVSDAD 446
Query: 235 AAERT--------DILMWNSLVDMYGKCGRMDLAYKVFATMDER----NVSSWTSLIVGY 282
+ DI +N L+ Y +M+ A ++ M + +V ++ SL+ G
Sbjct: 447 GLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGL 506
Query: 283 AMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPR 342
+ +E + M E G PN TF +L + K+ E + MKN + P
Sbjct: 507 CKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKN-KSVNPD 565
Query: 343 LQHYGCMVDLLGRAGLLDEAM----KMVEEMPMKPNSIVWGCLMGACETYGNVEMGEYVA 398
+G ++D + G LD A KM E + ++ + ++ A NV M E +
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLF 625
Query: 399 KHL 401
+ +
Sbjct: 626 QEM 628
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 154/364 (42%), Gaps = 52/364 (14%)
Query: 71 WNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGV 130
+N ++R + + +L +++ GVLP+ +T + ++ +CQ ++ ++ +
Sbjct: 219 FNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLI 278
Query: 131 KIGLQTNEYCETGFINLYCKSGEFTSARM----VFDENPDPKLGSWNAVIGGLSQGGLAR 186
+ G + + I CK+ +F A + + +E +P ++N +I G +GG+ +
Sbjct: 279 EQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQ 338
Query: 187 DAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNS 246
A R+ + +GF PD T SL G+ L L + +++++N+
Sbjct: 339 LAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFN--EALGKGIKPNVILYNT 396
Query: 247 LVDMYGKCGRMDLAYKVFATMDER------------------------------------ 270
L+ G + A ++ M E+
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Query: 271 ---NVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQE-G 326
++ ++ LI GY+ + ALE M + GV P+ T+ +L+ K ++
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 327 RCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMK---PNSIVWGCLM- 382
Y M++ G P L + +++ L R LDEA+ ++EEM K P+++ +G L+
Sbjct: 517 ETYKTMVEK--GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID 574
Query: 383 GACE 386
G C+
Sbjct: 575 GFCK 578
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 142/374 (37%), Gaps = 55/374 (14%)
Query: 58 RTHFLESNPAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQS- 116
R F + P F++N I+ A ++++ M G+ PD Y+ I +K+ C++
Sbjct: 101 RMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTS 160
Query: 117 ---FAIELGKQVHSLGVKI----------GLQTNEYCETGF------------------- 144
A+ L + S G ++ G + G+
Sbjct: 161 RPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFN 220
Query: 145 --INLYCKSGEFTSARMVFDENPD----PKLGSWNAVIGGLSQGGLARDAIRVFVNMRRH 198
+ + CK G+ + D+ P L ++N I GL Q G A+R+ +
Sbjct: 221 KLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQ 280
Query: 199 GFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAE---RTDILMWNSLVDMYGKCG 255
G PD +T +L Q VY K D +N+L+ Y K G
Sbjct: 281 GPKPDVITYNNLIYGLCKNSKFQ-----EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 256 RMDLAYKVFATMDER----NVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFV 311
+ LA ++ + ++ SLI G G N AL F G++PN + +
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYN 395
Query: 312 GVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPM 371
++ + G + E + M G+ P +Q + +V+ L + G + +A +V+ M
Sbjct: 396 TLIKGLSNQGMILEAAQLANEMSE-KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
Query: 372 K---PNSIVWGCLM 382
K P+ + L+
Sbjct: 455 KGYFPDIFTFNILI 468
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 148/356 (41%), Gaps = 54/356 (15%)
Query: 96 RAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFINLYCKSGEFT 155
++ V+ D Y+ I++K C++ IE + + G N T I+ CK GE
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 156 SARMVFDENPDPKLG------SWNAVIGGLSQGGLARDAIRVFVNMRRHGFAPDGVTMVS 209
A+ +F E KLG ++ +I GL + G+ + ++ M+ G P+
Sbjct: 216 KAKDLFFEM--GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPN------ 267
Query: 210 LTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKVFATMDE 269
L+T +N +++ K GR A++VF M E
Sbjct: 268 ----------------LYT---------------YNCVMNQLCKDGRTKDAFQVFDEMRE 296
Query: 270 RNVS----SWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVHGGKVQE 325
R VS ++ +LI G +NEA + M+ G+ PN +T+ ++ GK+ +
Sbjct: 297 RGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGK 356
Query: 326 GRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMP---MKPNSIVWGCLM 382
+K+ G++P L Y +V R G A KMV+EM +KP+ + + L+
Sbjct: 357 ALSLCRDLKS-RGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415
Query: 383 GACETYGNVEMGEYVAKHLQALEPWND-GAYVVLSNIYANKGMWKEVERIRSSMKE 437
N+E + ++ L D Y VL + + KG E R+ SM E
Sbjct: 416 DTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 161/367 (43%), Gaps = 27/367 (7%)
Query: 87 ALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGFIN 146
+ L + + G P+ ++ C+ IE K + K+GL NE T IN
Sbjct: 182 SFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLIN 241
Query: 147 LYCKSGEFTSARMVFDENPD----PKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGFAP 202
K+G ++++ + P L ++N V+ L + G +DA +VF MR G +
Sbjct: 242 GLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSC 301
Query: 203 DGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKA-AERTDILMWNSLVDMYGKCGRMDLAY 261
+ VT +L G +++L + + V K+ +++ +N+L+D + G++ A
Sbjct: 302 NIVTYNTLIG--GLCREMKLN-EANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL 358
Query: 262 KVFATMDERNVS----SWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSAC 317
+ + R +S ++ L+ G+ G + A + M E G++P+ VT+ ++
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF 418
Query: 318 VHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEMPMK---PN 374
+++ M+ + G+ P + Y ++ G ++EA ++ + M K PN
Sbjct: 419 ARSDNMEKAIQLRLSMEEL-GLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPN 477
Query: 375 SIVWGCL-MGACETYGNVEMGEYVA-KHLQALEPW----NDGAYVVLSNIYANKGMWKEV 428
+++ + +G C+ E Y A K L+ +E N +Y + + + KE
Sbjct: 478 EVIYNTMILGYCK-----EGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEA 532
Query: 429 ERIRSSM 435
ER+ M
Sbjct: 533 ERLVEKM 539
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 125/298 (41%), Gaps = 21/298 (7%)
Query: 85 RNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSLGVKIGLQTNEYCETGF 144
+ ++ M GV P+ YT V+ +C+ + QV + G+ N
Sbjct: 250 KQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTL 309
Query: 145 INLYCKSGEFTSARMVFDENP----DPKLGSWNAVIGGLSQGGLARDAIRVFVNMRRHGF 200
I C+ + A V D+ +P L ++N +I G G A+ + +++ G
Sbjct: 310 IGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGL 369
Query: 201 APDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDI----LMWNSLVDMYGKCGR 256
+P VT L S GD ++ K E I + + L+D + +
Sbjct: 370 SPSLVTYNILVSGFCRKGDTSGAAKM------VKEMEERGIKPSKVTYTILIDTFARSDN 423
Query: 257 MDLAYKVFATMDE----RNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTF-V 311
M+ A ++ +M+E +V +++ LI G+ + G +NEA F M E PN V +
Sbjct: 424 MEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNT 483
Query: 312 GVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVEEM 369
+L C G + + +M + + P + Y M+++L + EA ++VE+M
Sbjct: 484 MILGYCKEGSSYRALKLLKEMEEK--ELAPNVASYRYMIEVLCKERKSKEAERLVEKM 539
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 126/324 (38%), Gaps = 56/324 (17%)
Query: 69 FNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQVHSL 128
F ++++ T E + RL+ +++ + QS ++ L +
Sbjct: 75 FTSSSLLHYLTESETSKTKFRLY---------------EVIINSYVQSQSLNLSISYFNE 119
Query: 129 GVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENPDP---KLGSWNAVIGGLSQGGLA 185
V G C + S F F+EN + S+ +I G + G
Sbjct: 120 MVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEI 179
Query: 186 RDAIRVFVNMRRHGFAPDGVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWN 245
+ + + + GF+P+ V +L C G+++ AK
Sbjct: 180 EKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE----------KAK----------- 218
Query: 246 SLVDMYGKCGRMDLAYKVFATMDERNVSSWTSLIVGYAMHGHVNEALECFWCMREAGVRP 305
D++ + G++ L N ++T LI G +G + E + M+E GV P
Sbjct: 219 ---DLFFEMGKLGLV---------ANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFP 266
Query: 306 NYVTFVGVLSACVHGGKVQEGRCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKM 365
N T+ V++ G+ ++ FD M+ G++ + Y ++ L R L+EA K+
Sbjct: 267 NLYTYNCVMNQLCKDGRTKDAFQVFDEMRE-RGVSCNIVTYNTLIGGLCREMKLNEANKV 325
Query: 366 VEEMP---MKPNSIVWGCLM-GAC 385
V++M + PN I + L+ G C
Sbjct: 326 VDQMKSDGINPNLITYNTLIDGFC 349
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/425 (20%), Positives = 175/425 (41%), Gaps = 59/425 (13%)
Query: 66 PAPFNWNNIIRCYTRLEAPRNALRLHVLMLRAGVLPDRYTLPIVLKAVCQSFAIELGKQ- 124
P PF N I +L+ ++ G P R + V+ VC+ ++ +
Sbjct: 19 PDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDI 78
Query: 125 VHSLGVKIGLQTNEYCETGFINLYCKSGEFTSARMVFDENP-------DPKLGSWNAVIG 177
VHS+ + G + + I+ +C++G+ SA +V + P + S+N++
Sbjct: 79 VHSMP-RFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFN 137
Query: 178 GLSQ----------------------------------GGLARDAIRVFVNMRRHGFAPD 203
G S+ G + A++ F +M+R +P+
Sbjct: 138 GFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPN 197
Query: 204 GVTMVSLTSACGSVGDLQLGLQLHTCVYHAKAAERTDILMWNSLVDMYGKCGRMDLAYKV 263
VT L GDL++ + L+ + + + +++ + +L+D + K G M A ++
Sbjct: 198 VVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMS--LNVVTYTALIDGFCKKGEMQRAEEM 255
Query: 264 FATMDERNVSS----WTSLIVGYAMHGHVNEALECFWCMREAGVRPNYVTFVGVLSACVH 319
++ M E V +T++I G+ G + A++ M G+R + + ++S
Sbjct: 256 YSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCG 315
Query: 320 GGKVQEG-RCYFDMMKNVYGITPRLQHYGCMVDLLGRAGLLDEAMKMVE---EMPMKPNS 375
GK++E DM K+ + P + + M++ ++G + A+ M E +P+
Sbjct: 316 NGKLKEATEIVEDMEKS--DLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDV 373
Query: 376 IVWGCLMGACETYGNVEMGEYVAKHLQALEPWNDGAYVVLSNIYANKGMWKEVERIRSSM 435
+ ++ G + + A +E ND Y VL + +G + EVER+ S +
Sbjct: 374 VALSTMIDGIAKNGQL----HEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKI 429
Query: 436 KEGRL 440
E L
Sbjct: 430 SEAGL 434