Miyakogusa Predicted Gene

Lj6g3v1880100.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1880100.3 Non Chatacterized Hit- tr|K4AXM8|K4AXM8_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,46.34,4e-19,
,CUFF.60056.3
         (119 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G19190.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    72   6e-14
AT3G06070.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    60   3e-10

>AT5G19190.1 | Symbols:  | unknown protein; BEST Arabidopsis
          thaliana protein match is: unknown protein
          (TAIR:AT3G06070.1); Has 1807 Blast hits to 1807
          proteins in 277 species: Archae - 0; Bacteria - 0;
          Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
          Other Eukaryotes - 339 (source: NCBI BLink). |
          chr5:6457349-6457918 FORWARD LENGTH=154
          Length = 154

 Score = 72.4 bits (176), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 43/100 (43%), Positives = 68/100 (68%), Gaps = 10/100 (10%)

Query: 1  MELEDDLYFADLSKEIALLLM--DEHEDPLASYPADSLQVFPGAIQYPPPQFAFLYEQAL 58
          +EL+DD++FAD+SK+I+LL+M  DEH +P++   + S   F G  +       ++Y+Q  
Sbjct: 5  LELDDDVFFADISKQISLLIMDEDEHLNPVSLSSSSSSLSFQGLFRGGYQTAPYMYQQ-- 62

Query: 59 RRDQSKGTGVFIPQATQPIRR---KQRKGRYNNSYSANYQ 95
            +QSKGTGVFIP+++QP RR    Q++GRY +S++A  Q
Sbjct: 63 --EQSKGTGVFIPKSSQPRRRPHHHQKQGRY-SSFNAKQQ 99


>AT3G06070.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT5G19190.1); Has 33 Blast hits to 33 proteins in
           12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi
           - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0
           (source: NCBI BLink). | chr3:1831305-1831846 REVERSE
           LENGTH=151
          Length = 151

 Score = 60.5 bits (145), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 64/102 (62%), Gaps = 14/102 (13%)

Query: 1   MELEDDLYFADLSKEIALLLMDEHE-DPLASYPADSLQ-VFPGAIQYPPPQFAFLYEQ-- 56
           +EL+DD++FAD+SK++ LL+ DE E +P++   + S Q +F G  Q     +    EQ  
Sbjct: 5   LELDDDVFFADISKQLNLLITDEDEQNPISLSSSVSFQGLFRGNYQTSATPYMMYNEQIN 64

Query: 57  --ALRRDQSKGTGVFIPQATQPIRR------KQRKGRYNNSY 90
              +R  +SKGTGVFIP+++QP R+      ++++GR+  S+
Sbjct: 65  YNVIR--ESKGTGVFIPRSSQPRRKHNHHPHQKKQGRFIGSF 104