Miyakogusa Predicted Gene
- Lj6g3v1879870.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1879870.1 Non Chatacterized Hit- tr|F6H114|F6H114_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,24.51,1e-18,PPR,Pentatricopeptide repeat; PPR_2,Pentatricopeptide
repeat; FAMILY NOT NAMED,NULL; PPR: pentatrico,CUFF.60027.1
(393 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 446 e-125
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 393 e-109
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 1e-44
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 8e-44
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 2e-43
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 3e-42
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 1e-40
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 5e-37
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 139 4e-33
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 3e-30
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 3e-30
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 125 4e-29
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 2e-28
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 4e-28
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 4e-27
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 118 6e-27
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 118 9e-27
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 9e-27
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 2e-26
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 3e-26
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 6e-26
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 8e-26
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 2e-25
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 2e-25
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 2e-25
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 4e-25
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 4e-25
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 112 4e-25
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 5e-25
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 6e-25
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 2e-24
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 2e-24
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 3e-24
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 3e-24
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 5e-24
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 108 7e-24
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 7e-24
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 8e-24
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 8e-24
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 108 9e-24
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 3e-23
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 3e-23
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 4e-23
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 4e-23
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 4e-23
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 6e-23
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 7e-23
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 8e-23
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 104 9e-23
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 1e-22
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 2e-22
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 3e-22
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 102 4e-22
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 5e-22
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 5e-22
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 7e-22
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 8e-22
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 9e-22
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 100 1e-21
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 100 2e-21
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 3e-21
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 1e-20
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 2e-20
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 96 3e-20
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 4e-20
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 5e-20
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 9e-20
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 9e-20
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 9e-20
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 94 1e-19
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 1e-19
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 7e-19
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 7e-19
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 90 3e-18
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 4e-18
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 4e-18
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 5e-18
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 89 5e-18
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 89 6e-18
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 9e-18
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 7e-17
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 7e-17
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 4e-16
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 82 6e-16
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 80 2e-15
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 80 2e-15
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 8e-15
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 1e-14
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 77 1e-14
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 77 3e-14
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 6e-14
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 6e-14
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 73 4e-13
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 70 3e-12
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 3e-12
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 69 4e-12
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 69 6e-12
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 9e-12
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 64 1e-10
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 62 5e-10
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 61 1e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 61 1e-09
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 59 9e-09
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 9e-09
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 58 1e-08
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-08
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-08
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 5e-08
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 55 8e-08
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 54 1e-07
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 54 1e-07
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 54 1e-07
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 53 4e-07
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 9e-07
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 52 1e-06
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 51 1e-06
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 1e-06
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-06
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 3e-06
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 49 5e-06
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 6e-06
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 48 9e-06
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 446 bits (1146), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/384 (57%), Positives = 291/384 (75%), Gaps = 2/384 (0%)
Query: 8 SLRRYSTILSPNSSTPLTAKEKSRTALHLLKSETNPERILDICRAASLTPDFHLDRIALS 67
SL STILSP+S TPLT+KEKS+ AL LLKSE +P+RIL+ICRAASLTPD +DRIA S
Sbjct: 25 SLSSASTILSPDSKTPLTSKEKSKAALSLLKSEKDPDRILEICRAASLTPDCRIDRIAFS 84
Query: 68 VAISKLKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRD 127
A+ L + HFS + L +RPDL++ERF + +IVLY QA ML +++ F R +
Sbjct: 85 AAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANMLDHSLRVF-RDLE 143
Query: 128 EFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGST 187
+F+I+ +VKSLNALLFA L+AKDYKE R+Y++ PK Y I+PD+ETYN +IK F ESGS
Sbjct: 144 KFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSA 203
Query: 188 SSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNV 247
SS YSI++EM+R ++PN+ +F I GFY+E K +EVGKVL MM+++ G++ +STYN+
Sbjct: 204 SSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDR-GVNIGVSTYNI 262
Query: 248 RILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRG 307
RI SLCK K++ EAKALL GM+S G KPN V++SHLIHG+C E + +EAKK+F M RG
Sbjct: 263 RIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRG 322
Query: 308 YKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAK 367
KP+S CYFTL ++LC+GGDFE+A + KESM+K WVP+F+ MK LV GL SK ++AK
Sbjct: 323 CKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAK 382
Query: 368 ELIKQVKEKFTESSDKWDEIEAEL 391
ELI QVKEKFT + + W+E+EA L
Sbjct: 383 ELIGQVKEKFTRNVELWNEVEAAL 406
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 393 bits (1009), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/369 (53%), Positives = 270/369 (73%), Gaps = 3/369 (0%)
Query: 24 LTAKEK-SRTALHLLKSETNPERILDICRAASLTPDFHLDRIALSVAISKLKDGNHFSTI 82
LT+K+K SR L LLKSE NP+RIL+ICR+ SL+PD+H+DRI SVA+ L HF +
Sbjct: 35 LTSKQKKSRDTLSLLKSENNPDRILEICRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAV 94
Query: 83 DQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALL 142
Q L ++PD ++E F ++I+LYG+A ML ++ F R ++++I +VKSLNALL
Sbjct: 95 SQLLDGFIQNQPDPKSESFAVRAIILYGRANMLDRSIQTF-RNLEQYEIPRTVKSLNALL 153
Query: 143 FAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSV 202
FA L+AKDYKE +R+YL+ PK Y I+PD+ETYN +I+ ESGSTSS YSI++EM+R +
Sbjct: 154 FACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWI 213
Query: 203 RPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAK 262
+P A +F I+GFY E+KF+EV KV++MM+E +G+ ++TYN+ I LCK K+++EAK
Sbjct: 214 KPTAASFGLMIDGFYKEEKFDEVRKVMRMMDE-FGVHVGVATYNIMIQCLCKRKKSAEAK 272
Query: 263 ALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFL 322
AL+ G++S +PN V++S LIHG+C E NLDEA +F M GYKP+S CYFTL H L
Sbjct: 273 ALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCL 332
Query: 323 CEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTESSD 382
C+GGDFE+A + +ESM+K WVP+F+ MK LV GL SK D+AKELI VKEKFT + D
Sbjct: 333 CKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIAVVKEKFTRNVD 392
Query: 383 KWDEIEAEL 391
W+E+EA L
Sbjct: 393 LWNEVEAAL 401
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 194/369 (52%), Gaps = 6/369 (1%)
Query: 9 LRRYS---TILSPNSSTPLTAKEKSRTALHLLKSETNPERILDICRAASLTPDFHLDRIA 65
+RR+S T++S ++ ++ L+ E NP+RI++ + A + F +
Sbjct: 17 IRRFSSAATVVSEPTAVTAAISPPQKSLTSLVNGERNPKRIVEKFKKACESERFRTNIAV 76
Query: 66 LSVAISKLKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRM 125
+ +L +++ L + R D+ E F ++ I LYG+A M NA F M
Sbjct: 77 YDRTVRRLVAAKRLHYVEEILEEQKKYR-DMSKEGFAARIISLYGKAGMFENAQKVFEEM 135
Query: 126 RDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESG 185
+ SV S NALL A ++K + V ++ + P SI+PD+ +YNT+IK+ E
Sbjct: 136 PNR-DCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKD 194
Query: 186 STSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTY 245
S ++L E++ ++P+ VTF+ + Y + +FE ++ M EK ++ + TY
Sbjct: 195 SLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEK-NVAIDIRTY 253
Query: 246 NVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKK 305
N R+L L ++ E L + + G KP+ SF+ +I G EG +DEA+ + ++ K
Sbjct: 254 NARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVK 313
Query: 306 RGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDD 365
GY+P+ + L +C+ GDFESA E+ KE+ K ++ TT+++LV LV SK ++
Sbjct: 314 HGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREE 373
Query: 366 AKELIKQVK 374
A+E++K K
Sbjct: 374 AEEIVKIAK 382
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 174 bits (442), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 199/387 (51%), Gaps = 8/387 (2%)
Query: 9 LRRYSTILSPNSST-PLTAKEKSRTALHLLKSETNPERILDI-CRAASLTPDFHLDRIAL 66
+RR+++ + ++T P + K A L+ E +P++ L I + + R A
Sbjct: 11 VRRFASAAADGTTTAPSSGKISVSKAKSTLRKEHDPDKALKIYANVSDHSASPVSSRYAQ 70
Query: 67 SVAISKLKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMR 126
+ + +L FS I+ + P ++ E F S I YGQA M +A+ F +M
Sbjct: 71 ELTVRRLAKCRRFSDIETLIESHKND-PKIKEEPFYSTLIRSYGQASMFNHAMRTFEQM- 128
Query: 127 DEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYS-IQPDVETYNTVIKSFAESG 185
D++ S S NALL A L +K++ +V +++ + P+ Y+ I PD +Y +IKS+ +SG
Sbjct: 129 DQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSG 188
Query: 186 STSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTY 245
+ I+ +M + + F+ + Y + + E + M +K G + Y
Sbjct: 189 TPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKK-GCELDNAAY 247
Query: 246 NVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKK 305
NVRI+S K + K L++ M S G KP+ +S+++L+ YC G LDEAKKV+ ++
Sbjct: 248 NVRIMSAQK-ESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEG 306
Query: 306 RGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDD 365
P + + TL LC +E + I K+S+ +P+F T+K LV GLV K DD
Sbjct: 307 NNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDD 366
Query: 366 AKELIKQVKEKFTES-SDKWDEIEAEL 391
AK LI+ VK+KF S + W ++E EL
Sbjct: 367 AKGLIRTVKKKFPPSFLNAWKKLEEEL 393
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 172/344 (50%), Gaps = 3/344 (0%)
Query: 33 ALHLLKSETNPERILDICRAASLTPDFHLDRIALSVAISKLKDGNHFSTIDQFLRDLPTS 92
AL LKSE +PE++ ++ +A + +R A +S+L I+ L T
Sbjct: 41 ALVKLKSERDPEKLYNLFKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTL 100
Query: 93 RPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYK 152
P R E F+ + I+LYG+A M A+ F M D + SVKS NA L D
Sbjct: 101 -PQGRREGFIVRIIMLYGKAGMTKQALDTFFNM-DLYGCKRSVKSFNAALQVLSFNPDLH 158
Query: 153 EVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNA 212
+ D P Y I D ++N IKSF E G Y + EM+++ + P+ VT++
Sbjct: 159 TIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTL 218
Query: 213 IEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGG 272
I Y ++ + +M K G P L+T+NVRI L +R +A LL M
Sbjct: 219 ISALYKHERCVIGNGLWNLMVLK-GCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQ 277
Query: 273 RKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAF 332
+P+ ++++ +I G+ D A++V+ M +GYKP Y T+ H+LC+ G+F+ A+
Sbjct: 278 VEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAY 337
Query: 333 EITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+ K+ M K W PN T++ L+ GLV + D AK +++ V +
Sbjct: 338 TMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMELVHRR 381
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/308 (31%), Positives = 170/308 (55%), Gaps = 3/308 (0%)
Query: 67 SVAISKLKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMR 126
S I +L++ FSTID+ L+ D+++E F+ + ++LYG + M +A F M
Sbjct: 91 SAFIRRLREAKKFSTIDEVLQ-YQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEM- 148
Query: 127 DEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGS 186
E +VKS NALL A + +K E + + + P+ I PD+ TYNT+IK+ GS
Sbjct: 149 PELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGS 208
Query: 187 TSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYN 246
+ SI E+++N P+ ++F+ +E FY + F E ++ +M+ K +SP + +YN
Sbjct: 209 MDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSK-NLSPNIRSYN 267
Query: 247 VRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKR 306
R+ L + K+ ++A L+ M + G P+ +++ LI Y + NL+E K + +MK++
Sbjct: 268 SRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEK 327
Query: 307 GYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDA 366
G P++ Y L LC+ GD + A E+++E++ + K +V L+G K D+A
Sbjct: 328 GLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEA 387
Query: 367 KELIKQVK 374
+L+K K
Sbjct: 388 TQLVKNGK 395
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 105/243 (43%), Gaps = 12/243 (4%)
Query: 142 LFAALI-----AKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKS---FAESGSTSSVYSI 193
L++A I AK + + + L + K + D+++ + VI+ + SG + +
Sbjct: 89 LYSAFIRRLREAKKFSTIDEV-LQYQKKFD---DIKSEDFVIRIMLLYGYSGMAEHAHKL 144
Query: 194 LSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLC 253
EM + +F+ + + + KK +E K K + EK G++P L TYN I +LC
Sbjct: 145 FDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALC 204
Query: 254 KLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESP 313
+ + ++ + + G +P+ +SF+ L+ + E +++ MK + P
Sbjct: 205 RKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIR 264
Query: 314 CYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
Y + L F A + +G P+ T L+T + ++ + ++
Sbjct: 265 SYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEM 324
Query: 374 KEK 376
KEK
Sbjct: 325 KEK 327
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 190/368 (51%), Gaps = 6/368 (1%)
Query: 7 HSLRRYSTILSPNSSTPLTAKEKSRTALHLLKSETNPERILDICRAASLTPDFHLDRIAL 66
H+ RR+ + ++ ++TP K + + L+ E +P+ I + + A F +
Sbjct: 18 HTNRRFFSAVTAAAATPSPPKP---SLITLVNDERDPKFITEKFKKACQAEWFRKNIAVY 74
Query: 67 SVAISKLKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMR 126
+ +L F +++ L + P++ E F+++ I LYG+ M NA F M
Sbjct: 75 ERTVRRLAAAKKFEWVEEILEE-QNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEM- 132
Query: 127 DEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGS 186
E + S NALL A + +K + V I+ + P SI+PDV +YNT+IK GS
Sbjct: 133 PERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGS 192
Query: 187 TSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYN 246
+ +++ E++ ++P+ +TF+ + Y++ KFEE ++ M EK + + +YN
Sbjct: 193 FTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEK-NVKRDIRSYN 251
Query: 247 VRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKR 306
R+L L ++ E +L + KP+ +F+ +I G+ EG LDEA + +++K
Sbjct: 252 ARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKN 311
Query: 307 GYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDA 366
G +P + +L +C+ GD ESA+E+ KE K + + ++++V LV SK D+A
Sbjct: 312 GCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEA 371
Query: 367 KELIKQVK 374
+E+++ K
Sbjct: 372 EEIVELAK 379
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 196/392 (50%), Gaps = 22/392 (5%)
Query: 9 LRRYSTILSPNSSTP------LTAKEKSRTALHLLKSETNPERILDICRAASLTPDFHLD 62
LRR+ST +S T +K KS+ L+ +P++ L I ++ S L
Sbjct: 11 LRRFSTATGIDSQTTAYPGAITMSKAKSK-----LRKVQDPDKALAIYKSVSNNSTSPLS 65
Query: 63 -RIALSVAISKLKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTA 121
R A+ + + +L FS I+ + + P ++ E FLS I YG+A M +A+
Sbjct: 66 SRYAMELTVQRLAKSQRFSDIEALIES-HKNNPKIKTETFLSTLIRSYGRASMFDHAMKM 124
Query: 122 FTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYS-IQPDVETYNTVIKS 180
F M D+ +V S NALL A L + ++ V +++ +FP+ Y+ I PD +Y +IKS
Sbjct: 125 FEEM-DKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKS 183
Query: 181 FAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSP 240
+ +SG I+ +M+ V + F+ + Y +E + M K G
Sbjct: 184 YCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNK-GCDL 242
Query: 241 ALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVF 300
+ YNVR+++ K + K L++ M S G KP+ VS+++L+ YC +G + EAKKV+
Sbjct: 243 DNTVYNVRLMNAAK-ESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVY 301
Query: 301 ADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGV 360
+++ P + + TL LC G ++ + K+S +P+F T K L GLV
Sbjct: 302 EGLEQ----PNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKN 357
Query: 361 SKTDDAKELIKQVKEKFTES-SDKWDEIEAEL 391
++ +DA+ + + VK+KF +W ++E +L
Sbjct: 358 NRMEDARGVARIVKKKFPPRLVTEWKKLEEKL 389
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 170/353 (48%), Gaps = 4/353 (1%)
Query: 36 LLKSETNPERILDICRAASLTPDFHLDRIALSVAISKLKDGNHFSTIDQFLRDLPTSRPD 95
L+ S+++P +I AS P+F R + + I KL G +F+ ID L +S
Sbjct: 57 LIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYP 116
Query: 96 LRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVS 155
L E F + I +Y +A++ ++ F +M EF TP K LN +L + + Y + +
Sbjct: 117 LTGEIF-TYLIKVYAEAKLPEKVLSTFYKML-EFNFTPQPKHLNRILDVLVSHRGYLQKA 174
Query: 156 RIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEG 215
+ + + P+ +YN ++++F + S Y + +M V P+ ++ I+G
Sbjct: 175 FELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQG 234
Query: 216 FYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKP 275
F + + ++L M K G P +Y + SLC+ + EA LL M G P
Sbjct: 235 FCRKGQVNGAMELLDDMLNK-GFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNP 293
Query: 276 NWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEIT 335
+ V ++ +I G+C E +A+KV DM G P S Y TL LC+ G F+ +
Sbjct: 294 DLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYL 353
Query: 336 KESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV-KEKFTESSDKWDEI 387
+E + KG+ P+F+ LV G K ++A ++++ V K T SD W+ +
Sbjct: 354 EEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMV 406
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 100/193 (51%), Gaps = 1/193 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
I P+V TYN +I SF SG S +L M + P+ VTFS I F E+K E
Sbjct: 40 GIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEA 99
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
++ K M ++ + P TYN I CK R +AK +L M S G P+ V+FS LI+
Sbjct: 100 EEIYKEML-RWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLIN 158
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
GYC +D ++F +M +RG + Y TL H C+ GD ++A ++ E + G P
Sbjct: 159 GYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAP 218
Query: 346 NFTTMKKLVTGLV 358
++ T ++ GL
Sbjct: 219 DYITFHCMLAGLC 231
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 87/212 (41%), Gaps = 36/212 (16%)
Query: 197 MDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLK 256
M ++ ++ + V + ++ + + M EK G+ P + TYN I S C
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEK-GIFPNVLTYNCMIDSFCHSG 59
Query: 257 RTSEAKALLQGMISGGRKPNWVSFSHLIH------------------------------- 285
R S+A LL+ MI P+ V+FS LI+
Sbjct: 60 RWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYN 119
Query: 286 ----GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDK 341
G+C + +D+AK++ M +G P+ + TL + C+ ++ EI E +
Sbjct: 120 SMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 179
Query: 342 GWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
G V N T L+ G V D A++L+ ++
Sbjct: 180 GIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM 211
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 93/229 (40%), Gaps = 43/229 (18%)
Query: 79 FSTIDQFLRDLPTSR--PDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVK 136
+S DQ LR + + PD+ S I + + R + A + M + I P+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVT---FSALINAFVKERKVSEAEEIYKEML-RWSIFPTTI 116
Query: 137 SLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSE 196
+ N+++ +D + ++ LD + PDV T++T+I + ++ + I E
Sbjct: 117 TYNSMI-DGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 175
Query: 197 MDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLK 256
M R + N VT++ I GF C++
Sbjct: 176 MHRRGIVANTVTYTTLIHGF------------------------------------CQVG 199
Query: 257 RTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKK 305
A+ LL MIS G P++++F ++ G C + L +A + D++K
Sbjct: 200 DLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 172/354 (48%), Gaps = 4/354 (1%)
Query: 21 STPLTAKEKSRTALHLLKSETNPERILDICRAASLTPDFHLDRIALSVAISKLKDGNHFS 80
+ P T +A+ L+K E +P+ +LDI AS F+ + SV + L F
Sbjct: 47 TNPKTKFISHESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFL 106
Query: 81 TIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNA 140
+D L + + FL+ + + ++ + + F ++ ++ PS+ +++
Sbjct: 107 AVDAILHQMKYETCRFQESLFLNL-MRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAIST 165
Query: 141 LLFAALIAKDYKEVSRIYLDFPK-NYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDR 199
L LI +SR L + K N +QP+ +N ++K ++G + + ++ EM R
Sbjct: 166 CL-NLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKR 224
Query: 200 NSVR-PNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRT 258
+ + PN++T+S ++ ++ + +E ++ + M K G+SP T+NV I C+
Sbjct: 225 SGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEV 284
Query: 259 SEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTL 318
AK +L M G PN ++S L++G+C G + EAK+ F ++KK G K ++ Y TL
Sbjct: 285 ERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTL 344
Query: 319 AHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQ 372
+ C G+ + A ++ E + T ++ GL ++++A +++ Q
Sbjct: 345 MNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQ 398
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 2/228 (0%)
Query: 118 AVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTV 177
AV F M + I+P + N ++ A + + +I LDF K P+V Y+ +
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKI-LDFMKKNGCNPNVYNYSAL 309
Query: 178 IKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYG 237
+ F + G E+ + ++ + V ++ + F + +E K+L M+
Sbjct: 310 MNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRC 369
Query: 238 MSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAK 297
+ L TYNV + L R+ EA +L S G N S+ +++ C G L++A
Sbjct: 370 RADTL-TYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAV 428
Query: 298 KVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
K + M +RG P + L LCE G E + + G +P
Sbjct: 429 KFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIP 476
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 86/205 (41%), Gaps = 6/205 (2%)
Query: 132 TPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVY 191
P+V + +AL+ +E + + D K ++ D Y T++ F +G T
Sbjct: 300 NPNVYNYSALMNGFCKVGKIQEAKQTF-DEVKKTGLKLDTVGYTTLMNCFCRNGETDEAM 358
Query: 192 SILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE--KYGMSPALSTYNVRI 249
+L EM + R + +T++ + G SE + EE L+M+++ G+ +Y + +
Sbjct: 359 KLLGEMKASRCRADTLTYNVILRGLSSEGRSEEA---LQMLDQWGSEGVHLNKGSYRIIL 415
Query: 250 LSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYK 309
+LC +A L M G P+ +++ L+ C G + +V + G
Sbjct: 416 NALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLI 475
Query: 310 PESPCYFTLAHFLCEGGDFESAFEI 334
P + + +C+ FE+
Sbjct: 476 PGPKSWGAVVESICKERKLVHVFEL 500
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 73/176 (41%), Gaps = 2/176 (1%)
Query: 202 VRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEA 261
V+P+ S + + K+L + G+ P +N+ + CK + A
Sbjct: 156 VKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFA 215
Query: 262 KALLQGMI-SGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADM-KKRGYKPESPCYFTLA 319
+++ M SG PN +++S L+ EA ++F DM K G P+ + +
Sbjct: 216 FLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMI 275
Query: 320 HFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
+ C G+ E A +I G PN L+ G V K +AK+ +VK+
Sbjct: 276 NGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKK 331
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 126/240 (52%), Gaps = 2/240 (0%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
+TPSV + +L+ + A + +LD + + P+ TY T++ F++ G +
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAME-FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399
Query: 191 YSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRIL 250
Y +L EM+ N P+ VT++ I G K E+ VL+ M+EK G+SP + +Y+ +
Sbjct: 400 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEK-GLSPDVVSYSTVLS 458
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
C+ EA + + M+ G KP+ +++S LI G+C + EA ++ +M + G P
Sbjct: 459 GFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPP 518
Query: 311 ESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELI 370
+ Y L + C GD E A ++ E ++KG +P+ T L+ GL S+T +AK L+
Sbjct: 519 DEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 120/243 (49%), Gaps = 1/243 (0%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
P V S NA+L A + +K + + P+V TYN +I+ F +G+ +
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
+ +M+ PN VT++ I+G+ +K ++ K+L+ M K G+ P L +YNV I L
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK-GLEPNLISYNVVINGL 285
Query: 253 CKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPES 312
C+ R E +L M G + V+++ LI GYC EGN +A + A+M + G P
Sbjct: 286 CREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSV 345
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQ 372
Y +L H +C+ G+ A E + +G PN T LV G ++A ++++
Sbjct: 346 ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLRE 405
Query: 373 VKE 375
+ +
Sbjct: 406 MND 408
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 116/249 (46%), Gaps = 2/249 (0%)
Query: 128 EFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGST 187
E Q++P+V + N L+ A + +V+ D + P+V TYNT+I + +
Sbjct: 198 ESQVSPNVFTYNILIRGFCFAGNI-DVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 188 SSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNV 247
+ +L M + PN ++++ I G E + +EV VL M + G S TYN
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR-GYSLDEVTYNT 315
Query: 248 RILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRG 307
I CK +A + M+ G P+ ++++ LIH C GN++ A + M+ RG
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 308 YKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAK 367
P Y TL + G A+ + +E D G+ P+ T L+ G K +DA
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 368 ELIKQVKEK 376
+++ +KEK
Sbjct: 436 AVLEDMKEK 444
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 128/280 (45%), Gaps = 15/280 (5%)
Query: 108 LYGQARMLPNAVTAFTRMRDEFQ--ITPSVKSLNALLFAA-----LIAKDYKEVSRI--- 157
LY A++L V A T + DE+ + S++ L ++ L+ K Y +S I
Sbjct: 95 LYKTAQILAEDVAAKT-LDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKA 153
Query: 158 --YLDFPKNYSIQPDVETYNTVIKSFAESG-STSSVYSILSEMDRNSVRPNAVTFSNAIE 214
+ + + P V +YN V+ + S + S ++ EM + V PN T++ I
Sbjct: 154 LSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIR 213
Query: 215 GFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRK 274
GF + + ME K G P + TYN I CKL++ + LL+ M G +
Sbjct: 214 GFCFAGNIDVALTLFDKMETK-GCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLE 272
Query: 275 PNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEI 334
PN +S++ +I+G C EG + E V +M +RGY + Y TL C+ G+F A +
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332
Query: 335 TKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVK 374
E + G P+ T L+ + + A E + Q++
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 127/274 (46%), Gaps = 18/274 (6%)
Query: 115 LPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETY 174
+ +A+ M+++ ++P V S + +L + D E R+ + + I+PD TY
Sbjct: 431 MEDAIAVLEDMKEK-GLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK-GIKPDTITY 488
Query: 175 NTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE 234
+++I+ F E T + EM R + P+ T++ I + E E+ ++ M E
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Query: 235 KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH--------- 285
K G+ P + TY+V I L K RT EAK LL + P+ V++ LI
Sbjct: 549 K-GVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKS 607
Query: 286 ------GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESM 339
G+C +G + EA +VF M + +KP+ Y + H C GD A+ + KE +
Sbjct: 608 VVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMV 667
Query: 340 DKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
G++ + T+ LV L K ++ +I V
Sbjct: 668 KSGFLLHTVTVIALVKALHKEGKVNELNSVIVHV 701
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 105/213 (49%), Gaps = 5/213 (2%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
++P++ +YN VI G V +L+EM+R + VT++ I+G+ E F +
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 226 GKVLKMMEE--KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHL 283
L M E ++G++P++ TY I S+CK + A L M G PN +++ L
Sbjct: 330 ---LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTL 386
Query: 284 IHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGW 343
+ G+ +G ++EA +V +M G+ P Y L + C G E A + ++ +KG
Sbjct: 387 VDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446
Query: 344 VPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
P+ + +++G D+A + +++ EK
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 126/250 (50%), Gaps = 5/250 (2%)
Query: 130 QITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSS 189
+I P+V + N ++ AL +R ++ K Y P+V +YNT+I + + G
Sbjct: 218 KIQPNVFTFNVVI-NALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGK 276
Query: 190 VY---SILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYN 246
+Y ++L EM N V PN TF+ I+GF+ + KV K M ++ + P + +YN
Sbjct: 277 MYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ-DVKPNVISYN 335
Query: 247 VRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKR 306
I LC + SEA ++ M+S G +PN ++++ LI+G+C L EA +F +K +
Sbjct: 336 SLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQ 395
Query: 307 GYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDA 366
G P + Y L C+ G + F + +E +G VP+ T L+ GL + A
Sbjct: 396 GAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455
Query: 367 KELIKQVKEK 376
K+L Q+ K
Sbjct: 456 KKLFDQLTSK 465
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 2/190 (1%)
Query: 167 IQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVG 226
++P+V +YN++I G S S+ +M V+PN +T++ I GF +E
Sbjct: 327 VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEAL 386
Query: 227 KVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHG 286
+ ++ + G P YN+ I + CKL + + AL + M G P+ +++ LI G
Sbjct: 387 DMFGSVKGQ-GAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 287 YCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPN 346
C GN++ AKK+F + +G P+ + L C G+ A + KE G P
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPR 504
Query: 347 FTTMKKLVTG 356
T ++ G
Sbjct: 505 HLTYNIVMKG 514
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 7/229 (3%)
Query: 125 MRDEF---QITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSF 181
MRD+ + P++ + NAL+ KE ++ K P YN +I ++
Sbjct: 353 MRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSV-KGQGAVPTTRMYNMLIDAY 411
Query: 182 AESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPA 241
+ G +++ EM+R + P+ T++ I G E K+ + K G+ P
Sbjct: 412 CKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK-GL-PD 469
Query: 242 LSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFA 301
L T+++ + C+ + +A LL+ M G KP ++++ ++ GYC EGNL A +
Sbjct: 470 LVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRT 529
Query: 302 DM-KKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTT 349
M K+R + Y L + G E A + E ++KG VPN T
Sbjct: 530 QMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 5/186 (2%)
Query: 176 TVIKSFAESGSTSSVYSILSEMDR-NSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE 234
+ + F +GS V+SI + ++V N++ + + + +FE + K
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKR-SG 180
Query: 235 KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLD 294
YG + + +++L K R+++ + + + MI +PN +F+ +I+ C G ++
Sbjct: 181 YYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMN 240
Query: 295 EAKKVFADMKKRGYKPESPCYFTLAHFLCE---GGDFESAFEITKESMDKGWVPNFTTMK 351
+A+ V DMK G P Y TL C+ G A + KE ++ PN TT
Sbjct: 241 KARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFN 300
Query: 352 KLVTGL 357
L+ G
Sbjct: 301 ILIDGF 306
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 80/176 (45%), Gaps = 11/176 (6%)
Query: 114 MLPNAVTAFTRMRDEFQ---------ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKN 164
ML +A ++ D F I P V + N L+ A L E ++ D +
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI-AGLCRNGNIEAAKKLFDQLTS 464
Query: 165 YSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEE 224
+ PD+ T++ +++ + G + +L EM + ++P +T++ ++G+ E +
Sbjct: 465 KGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKA 523
Query: 225 VGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSF 280
+ ME++ + +++YNV + + + +A LL M+ G PN +++
Sbjct: 524 ATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 167/389 (42%), Gaps = 49/389 (12%)
Query: 15 ILSPNSSTPLTAKEKSRTALHLLKSETNPERILDICRAASLTPDFHLDRIALSVAISKLK 74
++ P S +P + L LLKSE NP + +A+ P + + + +L
Sbjct: 2 VVFPKSLSP-------KHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLS 54
Query: 75 DG---NHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQI 131
+ NH S I + +R S+ +E I YG+ M A+ F RMR+ F
Sbjct: 55 ETRMVNHVSRIVELIR----SQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGC 110
Query: 132 TPSVKSLNALLFAALIAKDYKEV----------------------------------SRI 157
P+++S N LL A + AK + +V +R
Sbjct: 111 EPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARG 170
Query: 158 YLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFY 217
+LD+ +PDV +Y+TVI A++G + EM V P+ ++ I+GF
Sbjct: 171 FLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFL 230
Query: 218 SEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNW 277
EK + ++ + E + P + T+N+ I L K R + + + M R+ +
Sbjct: 231 KEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDL 290
Query: 278 VSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKE 337
++S LIHG C GN+D+A+ VF ++ +R + Y T+ C G + + E+ +
Sbjct: 291 YTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRI 350
Query: 338 SMDKGWVPNFTTMKKLVTGLVGVSKTDDA 366
K V N + L+ GL+ K D+A
Sbjct: 351 MEHKNSV-NIVSYNILIKGLLENGKIDEA 378
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 108/250 (43%), Gaps = 4/250 (1%)
Query: 128 EFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFP-KNYSIQPDVETYNTVIKSFAESGS 186
E + + ++ S N L+ L E + I+ P K Y+ D TY I +G
Sbjct: 352 EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYA--ADKTTYGIFIHGLCVNGY 409
Query: 187 TSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYN 246
+ ++ E++ + + +++ I+ +K+ EE ++K M K+G+ N
Sbjct: 410 VNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMS-KHGVELNSHVCN 468
Query: 247 VRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKR 306
I L + R EA L+ M G +P VS++ LI G C G EA +M +
Sbjct: 469 ALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN 528
Query: 307 GYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDA 366
G+KP+ Y L LC + A E+ + + G + L+ GL V K DDA
Sbjct: 529 GWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDA 588
Query: 367 KELIKQVKEK 376
++ ++ +
Sbjct: 589 MTVMANMEHR 598
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 121/303 (39%), Gaps = 10/303 (3%)
Query: 82 IDQFLRDLPTSRPDLRNERFLSQSIVLYG--QARMLPNAVTAFTRMRDEFQITPSVKSLN 139
+D L+ + + R + + S +++G A + A + F + DE + + V + N
Sbjct: 271 VDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNEL-DERKASIDVVTYN 329
Query: 140 ALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDR 199
+L KE ++ S+ ++ +YN +IK E+G I M
Sbjct: 330 TMLGGFCRCGKIKESLELWRIMEHKNSV--NIVSYNILIKGLLENGKIDEATMIWRLMPA 387
Query: 200 NSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVR--ILSLCKLKR 257
+ T+ I G V K L +M+E L Y I LCK KR
Sbjct: 388 KGYAADKTTYGIFIHGLCVNGY---VNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKR 444
Query: 258 TSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFT 317
EA L++ M G + N + LI G + L EA +M K G +P Y
Sbjct: 445 LEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNI 504
Query: 318 LAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKF 377
L LC+ G F A KE ++ GW P+ T L+ GL K D A EL Q +
Sbjct: 505 LICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSG 564
Query: 378 TES 380
E+
Sbjct: 565 LET 567
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 1/197 (0%)
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL 229
DV Y ++I + +++ EM ++ V N+ + I G + + E L
Sbjct: 428 DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFL 487
Query: 230 KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW 289
+ M K G P + +YN+ I LCK + EA A ++ M+ G KP+ ++S L+ G C
Sbjct: 488 REMG-KNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCR 546
Query: 290 EGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTT 349
+ +D A +++ + G + + + L H LC G + A + + N T
Sbjct: 547 DRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVT 606
Query: 350 MKKLVTGLVGVSKTDDA 366
L+ G V ++ A
Sbjct: 607 YNTLMEGFFKVGDSNRA 623
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 104/250 (41%), Gaps = 14/250 (5%)
Query: 130 QITPSVKSLNALLFAALI-----AKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAES 184
++ S L+ +A++I K +E S + + K + ++ + N +I
Sbjct: 419 EVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSK-HGVELNSHVCNALIGGLIRD 477
Query: 185 GSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALST 244
L EM +N RP V+++ I G KF E +K M E G P L T
Sbjct: 478 SRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN-GWKPDLKT 536
Query: 245 YNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMK 304
Y++ + LC+ ++ A L + G + + + + LIHG C G LD+A V A+M+
Sbjct: 537 YSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANME 596
Query: 305 KRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLV---GVS 361
R Y TL + GD A I G P+ + ++ GL GVS
Sbjct: 597 HRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVS 656
Query: 362 KT----DDAK 367
DDA+
Sbjct: 657 YAMEFFDDAR 666
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 2/220 (0%)
Query: 139 NALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMD 198
NAL+ + E S + KN +P V +YN +I ++G + + EM
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKN-GCRPTVVSYNILICGLCKAGKFGEASAFVKEML 526
Query: 199 RNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRT 258
N +P+ T+S + G ++K + ++ + G+ + +N+ I LC + +
Sbjct: 527 ENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQS-GLETDVMMHNILIHGLCSVGKL 585
Query: 259 SEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTL 318
+A ++ M N V+++ L+ G+ G+ + A ++ M K G +P+ Y T+
Sbjct: 586 DDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTI 645
Query: 319 AHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLV 358
LC A E ++ + G P T LV +V
Sbjct: 646 MKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVV 685
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 98/239 (41%), Gaps = 36/239 (15%)
Query: 173 TYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMM 232
Y+ +++ +E+ + V I+ + + + + I+ + ++ V K M
Sbjct: 45 VYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRM 104
Query: 233 EEKYGMSPA-----------------------------------LSTYNVRILSLCKLKR 257
E +G PA L TYNV I CK K
Sbjct: 105 REIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKE 164
Query: 258 TSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFT 317
+A+ L M G KP+ S+S +I+ G LD+A ++F +M +RG P+ CY
Sbjct: 165 FEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNI 224
Query: 318 LAHFLCEGGDFESAFEITKESM-DKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
L + D ++A E+ + D PN T +++GL + DD ++ +++K+
Sbjct: 225 LIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQ 283
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 111/212 (52%), Gaps = 1/212 (0%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
+ D+ TYNT+I F +G +L +M + + PN VTFS I+ F E K E +
Sbjct: 295 KADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQ 354
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
+LK M ++ G++P TYN I CK R EA ++ MIS G P+ ++F+ LI+GY
Sbjct: 355 LLKEMMQR-GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
C +D+ ++F +M RG + Y TL C+ G E A ++ +E + + P+
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473
Query: 348 TTMKKLVTGLVGVSKTDDAKELIKQVKEKFTE 379
+ K L+ GL + + A E+ ++++ E
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKME 505
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 112/241 (46%), Gaps = 2/241 (0%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
P++ +LN L+ + + + + +D QP+ TY V+ +SG T+
Sbjct: 191 PTLITLNTLVNGLCLNGKVSD-AVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
+L +M+ +++ +AV +S I+G + + + ME K G + TYN I
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK-GFKADIITYNTLIGGF 308
Query: 253 CKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPES 312
C R + LL+ MI PN V+FS LI + EG L EA ++ +M +RG P +
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQ 372
Y +L C+ E A ++ + KG P+ T L+ G ++ DD EL ++
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428
Query: 373 V 373
+
Sbjct: 429 M 429
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 40/267 (14%)
Query: 105 SIVLYGQAR--MLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFP 162
SI++ G + L NA F M + + + N L+ A + + +++ D
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIK-GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
K I P+V T++ +I SF + G +L EM + + PN +T+++ I+GF E +
Sbjct: 326 KR-KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL 384
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRI--------------------------------- 249
EE +++ +M K G P + T+N+ I
Sbjct: 385 EEAIQMVDLMISK-GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 250 --LSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRG 307
C+ + AK L Q M+S +P+ VS+ L+ G C G L++A ++F ++K
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 308 YKPESPCYFTLAHFLCEGGDFESAFEI 334
+ + Y + H +C + A+++
Sbjct: 504 MELDIGIYMIIIHGMCNASKVDDAWDL 530
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 96/209 (45%), Gaps = 1/209 (0%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
+PD +NT++ S ++ M +P +T + + G K +
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVV 214
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
++ M E G P TY + +CK +T+ A LL+ M K + V +S +I G
Sbjct: 215 LIDRMVET-GFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
C +G+LD A +F +M+ +G+K + Y TL C G ++ ++ ++ + + PN
Sbjct: 274 CKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNV 333
Query: 348 TTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
T L+ V K +A +L+K++ ++
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQR 362
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKK----FEE 224
P V +N + + A++ V ++ +M+ + + T S I F +K F
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 225 VGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLI 284
+GK++K+ G P +N + LC R SEA L+ M+ G KP ++ + L+
Sbjct: 146 MGKIMKL-----GYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLV 200
Query: 285 HGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWV 344
+G C G + +A + M + G++P Y + + +C+ G A E+ ++ ++
Sbjct: 201 NGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIK 260
Query: 345 PNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+ ++ GL D+A L +++ K
Sbjct: 261 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 78/194 (40%), Gaps = 35/194 (18%)
Query: 173 TYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYS----EKKFEEVGKV 228
TYNT+++ F +SG + EM VRP+ V++ ++G EK E GK+
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Query: 229 LKMMEEK---------YGMSPA---------------------LSTYNVRILSLCKLKRT 258
K E +GM A YN+ I LC+
Sbjct: 500 EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559
Query: 259 SEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTL 318
S+A L + M G P+ ++++ LI + + + A ++ +MK G+ + +
Sbjct: 560 SKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMV 619
Query: 319 AHFLCEGGDFESAF 332
+ L G+ + +F
Sbjct: 620 INML-SSGELDKSF 632
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 97/193 (50%), Gaps = 1/193 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
I PDV TY+ +I SF SG + +L +M + P+ VTFS I E K E
Sbjct: 106 GIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEA 165
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
++ M + G+ P TYN I CK R ++AK +L M S P+ V+FS LI+
Sbjct: 166 EEIYGDMLRR-GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLIN 224
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
GYC +D ++F +M +RG + Y TL H C+ GD ++A ++ + G P
Sbjct: 225 GYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAP 284
Query: 346 NFTTMKKLVTGLV 358
N+ T + ++ L
Sbjct: 285 NYITFQSMLASLC 297
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 1/203 (0%)
Query: 174 YNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMME 233
Y T+I + G T S ++LS+M+ ++ + V ++ I+ + + M
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103
Query: 234 EKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNL 293
+K G+ P + TY+ I S C+ R ++A+ LL+ MI P+ V+FS LI+ EG +
Sbjct: 104 DK-GIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKV 162
Query: 294 DEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKL 353
EA++++ DM +RG P + Y ++ C+ A + K P+ T L
Sbjct: 163 SEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTL 222
Query: 354 VTGLVGVSKTDDAKELIKQVKEK 376
+ G + D+ E+ ++ +
Sbjct: 223 INGYCKAKRVDNGMEIFCEMHRR 245
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 94/246 (38%), Gaps = 43/246 (17%)
Query: 62 DRIALSVAISKLKDGNHFSTIDQFLRDLPTSR--PDLRNERFLSQSIVLYGQARMLPNAV 119
D I S I ++ +Q LRD+ + PD+ L ++V G+
Sbjct: 110 DVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIY 169
Query: 120 TAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIK 179
R I P+ + N+++ +D ++ LD + S PDV T++T+I
Sbjct: 170 GDMLRR----GIFPTTITYNSMI-DGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLIN 224
Query: 180 SFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMS 239
+ ++ + I EM R + N VT++ I GF
Sbjct: 225 GYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF----------------------- 261
Query: 240 PALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKV 299
C++ A+ LL MIS G PN+++F ++ C + L +A +
Sbjct: 262 -------------CQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAI 308
Query: 300 FADMKK 305
D++K
Sbjct: 309 LEDLQK 314
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 130/260 (50%), Gaps = 3/260 (1%)
Query: 115 LPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETY 174
L A A +MR EF + S N L+ L ++ E +Y +P ++TY
Sbjct: 169 LKQAPYALRKMR-EFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILE-GFRPSLQTY 226
Query: 175 NTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE 234
++++ + SV +L EM+ ++PN TF+ I K E ++LK M++
Sbjct: 227 SSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDD 286
Query: 235 KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLD 294
+ G P + TY V I +LC ++ AK + + M +G KP+ V++ L+ + +LD
Sbjct: 287 E-GCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLD 345
Query: 295 EAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
K+ +++M+K G+ P+ + L LC+ G+F AF+ D+G +PN T L+
Sbjct: 346 SVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLI 405
Query: 355 TGLVGVSKTDDAKELIKQVK 374
GL+ V + DDA EL ++
Sbjct: 406 CGLLRVHRLDDALELFGNME 425
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 123/289 (42%), Gaps = 13/289 (4%)
Query: 98 NERFLSQSIVLYGQARMLP------------NAVTAFTRMRDEFQITPSVKSLNALLFAA 145
+ER ++ I G + ++P A T F + + + P + + N LL
Sbjct: 736 SERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYN-LLIGG 794
Query: 146 LIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPN 205
L+ D E+++ K+ PDV TYN ++ ++ +SG ++ + EM + N
Sbjct: 795 LLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEAN 854
Query: 206 AVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALL 265
+T + I G ++ + + SP TY I L K R EAK L
Sbjct: 855 TITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLF 914
Query: 266 QGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEG 325
+GM+ G +PN ++ LI+G+ G D A +F M K G +P+ Y L LC
Sbjct: 915 EGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMV 974
Query: 326 GDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVK 374
G + KE + G P+ ++ GL + ++A L ++K
Sbjct: 975 GRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMK 1023
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 119/275 (43%), Gaps = 3/275 (1%)
Query: 105 SIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKN 164
I + G+A + A RM DE P V + L+ A A+ ++ + K
Sbjct: 264 CIRVLGRAGKINEAYEILKRMDDE-GCGPDVVTYTVLIDALCTARKLDCAKEVF-EKMKT 321
Query: 165 YSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEE 224
+PD TY T++ F+++ SV SEM+++ P+ VTF+ ++ F E
Sbjct: 322 GRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGE 381
Query: 225 VGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLI 284
L +M ++ G+ P L TYN I L ++ R +A L M S G KP ++ I
Sbjct: 382 AFDTLDVMRDQ-GILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFI 440
Query: 285 HGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWV 344
Y G+ A + F MK +G P + L + G A +I D G V
Sbjct: 441 DYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLV 500
Query: 345 PNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTE 379
P+ T ++ V + D+A +L+ ++ E E
Sbjct: 501 PDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCE 535
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 140/350 (40%), Gaps = 41/350 (11%)
Query: 62 DRIALSVAISKLKDGNHFSTIDQFLRDLPTSR--PDLRNERFLSQSIVLYGQARMLPNAV 119
DR+ + + D ++ QF ++ PD+ L ++ +A A
Sbjct: 327 DRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALC---KAGNFGEAF 383
Query: 120 TAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIK 179
MRD+ I P++ + N L+ L + ++ + ++ ++P TY I
Sbjct: 384 DTLDVMRDQ-GILPNLHTYNTLICGLLRVHRLDDALELFGNM-ESLGVKPTAYTYIVFID 441
Query: 180 SFAESGSTSSVYSILSEMDRNSVRPNAVT-----FSNAIEG--------FYSEK------ 220
+ +SG + S +M + PN V +S A G FY K
Sbjct: 442 YYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVP 501
Query: 221 -------------KFEEVGKVLKMMEE--KYGMSPALSTYNVRILSLCKLKRTSEAKALL 265
K E+ + +K++ E + G P + N I +L K R EA +
Sbjct: 502 DSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMF 561
Query: 266 QGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEG 325
M KP V+++ L+ G G + EA ++F M ++G P + + TL LC+
Sbjct: 562 MRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKN 621
Query: 326 GDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
+ A ++ + MD G VP+ T ++ GLV + +A Q+K+
Sbjct: 622 DEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK 671
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 91/191 (47%), Gaps = 2/191 (1%)
Query: 164 NYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFE 223
+Y +P+ YN +I F ++G + ++ M + VRP+ T+S ++ + +
Sbjct: 919 DYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVD 978
Query: 224 EVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGM-ISGGRKPNWVSFSH 282
E K ++E G++P + YN+ I L K R EA L M S G P+ +++
Sbjct: 979 EGLHYFKELKES-GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNS 1037
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
LI G ++EA K++ ++++ G +P + L G E A+ + + + G
Sbjct: 1038 LILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGG 1097
Query: 343 WVPNFTTMKKL 353
+ PN T ++L
Sbjct: 1098 FSPNTGTYEQL 1108
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 109/245 (44%), Gaps = 2/245 (0%)
Query: 132 TPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVY 191
P V + L+ A A ++ E LD ++ I P++ TYNT+I
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFDT-LDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 418
Query: 192 SILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILS 251
+ M+ V+P A T+ I+ + + + M+ K G++P + N + S
Sbjct: 419 ELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK-GIAPNIVACNASLYS 477
Query: 252 LCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPE 311
L K R EAK + G+ G P+ V+++ ++ Y G +DEA K+ ++M + G +P+
Sbjct: 478 LAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD 537
Query: 312 SPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIK 371
+L + L + + A+++ + P T L+ GL K +A EL +
Sbjct: 538 VIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFE 597
Query: 372 QVKEK 376
+ +K
Sbjct: 598 GMVQK 602
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 109/268 (40%), Gaps = 18/268 (6%)
Query: 56 TPDFHLDRIALSVAISKL-KDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYG---- 110
T + + I ++ IS L K GN +D + DL ++R S + YG
Sbjct: 848 THECEANTITHNIVISGLVKAGNVDDALDLYY--------DLMSDRDFSPTACTYGPLID 899
Query: 111 ---QARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSI 167
++ L A F M D + P+ N L+ A + ++ K +
Sbjct: 900 GLSKSGRLYEAKQLFEGMLD-YGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE-GV 957
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
+PD++TY+ ++ G E+ + + P+ V ++ I G + EE
Sbjct: 958 RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALV 1017
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
+ M+ G++P L TYN IL+L EA + + G +PN +F+ LI GY
Sbjct: 1018 LFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGY 1077
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCY 315
G + A V+ M G+ P + Y
Sbjct: 1078 SLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 102/248 (41%), Gaps = 40/248 (16%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
YG++ +A+ F +M+ + I P++ + NA L++ A +E +I+ K+ +
Sbjct: 443 YGKSGDSVSALETFEKMKTK-GIAPNIVACNASLYSLAKAGRDREAKQIFYGL-KDIGLV 500
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
PD TYN ++K +++ G +LSEM N P+ + ++ I Y + +E K+
Sbjct: 501 PDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKM 560
Query: 229 LKMMEE----------------------------------KYGMSPALSTYNVRILSLCK 254
M+E + G P T+N LCK
Sbjct: 561 FMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCK 620
Query: 255 LKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPC 314
+ A +L M+ G P+ +++ +I G G + EA F MKK Y P
Sbjct: 621 NDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY----PD 676
Query: 315 YFTLAHFL 322
+ TL L
Sbjct: 677 FVTLCTLL 684
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 123/347 (35%), Gaps = 79/347 (22%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
Y + + A+ + M E P V +N+L+ A E ++++ K ++
Sbjct: 513 YSKVGEIDEAIKLLSEMM-ENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM-KEMKLK 570
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P V TYNT++ ++G + M + PN +TF+ + K +EV
Sbjct: 571 PTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLC---KNDEVTLA 627
Query: 229 LKMMEE--KYGMSPALSTYNVRILSLCKLKRTSEAKA------------------LLQGM 268
LKM+ + G P + TYN I L K + EA LL G+
Sbjct: 628 LKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGV 687
Query: 269 ISG-----------------GRKP-------------------NWVSFSH--LIHGYCWE 290
+ +P N VSFS + +G C +
Sbjct: 688 VKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRD 747
Query: 291 G---------------NLDEAKKVFADMKKR-GYKPESPCYFTLAHFLCEGGDFESAFEI 334
G N+ A+ +F K G +P+ P Y L L E E A ++
Sbjct: 748 GDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDV 807
Query: 335 TKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTESS 381
+ G +P+ T L+ K D+ EL K++ E++
Sbjct: 808 FLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEAN 854
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 154/365 (42%), Gaps = 48/365 (13%)
Query: 51 RAASLTPDFHLDRIALSVAISKLKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVL-- 108
++A F L LS I + F ++++ L SR L N + +S ++
Sbjct: 65 KSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLL-----SRIRLENRVIIERSFIVVF 119
Query: 109 --YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIY---LDFPK 163
YG+A + AV F RM DEF+ SVKS N++L + Y Y ++
Sbjct: 120 RAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNM 179
Query: 164 NYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFE 223
N +I P+ ++N VIK+ + + M P+ T+ ++G E++ +
Sbjct: 180 NMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERID 239
Query: 224 EVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHL 283
E +L M+ + G SP+ YNV I LCK + L+ M G PN V+++ L
Sbjct: 240 EAVLLLDEMQSE-GCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298
Query: 284 IHGYCWEGNLD-----------------------------------EAKKVFADMKKRGY 308
IHG C +G LD +A ++ + M++RGY
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 309 KPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKE 368
Y L L + G E A + ++ +KG PN LV GL K ++AKE
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418
Query: 369 LIKQV 373
++ ++
Sbjct: 419 ILNRM 423
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 96/205 (46%), Gaps = 1/205 (0%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P+ TY T+I + + +LS M+ N +S I G + E K EE +
Sbjct: 325 PNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSL 384
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
+ M EK G P + Y+V + LC+ + +EAK +L MI+ G PN ++S L+ G+
Sbjct: 385 WRKMAEK-GCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFF 443
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
G +EA +V+ +M K G CY L LC G + A + + + G P+
Sbjct: 444 KTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTV 503
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQV 373
++ GL G+ D A +L ++
Sbjct: 504 AYSSIIKGLCGIGSMDAALKLYHEM 528
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 125/271 (46%), Gaps = 17/271 (6%)
Query: 107 VLYGQARMLPNAVTAFTRMRDEFQITPSVKS----LNALLFAALIAKDYKE-----VSRI 157
V YG L N + R D ++ S++ LN +++ LI+ +KE +
Sbjct: 328 VTYGT---LINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSL 384
Query: 158 YLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFY 217
+ + +P++ Y+ ++ G + IL+ M + PNA T+S+ ++GF+
Sbjct: 385 WRKMAEK-GCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFF 443
Query: 218 SEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNW 277
EE +V K M +K G S Y+V I LC + R EA + M++ G KP+
Sbjct: 444 KTGLCEEAVQVWKEM-DKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDT 502
Query: 278 VSFSHLIHGYCWEGNLDEAKKVFADM---KKRGYKPESPCYFTLAHFLCEGGDFESAFEI 334
V++S +I G C G++D A K++ +M ++ +P+ Y L LC D A ++
Sbjct: 503 VAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDL 562
Query: 335 TKESMDKGWVPNFTTMKKLVTGLVGVSKTDD 365
+D+G P+ T + L S + D
Sbjct: 563 LNSMLDRGCDPDVITCNTFLNTLSEKSNSCD 593
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 150/334 (44%), Gaps = 15/334 (4%)
Query: 45 RILDICRAASLTPDFHLDRIALSVAISKLKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQ 104
+IL+I + PD + +S + N S +D+ + PD+ + +
Sbjct: 158 KILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM-----SVSPDVVTYNTILR 212
Query: 105 SIVLYGQARMLPNAVTAFTRM--RDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFP 162
S+ G+ L A+ RM RD + P V + L+ A ++ LD
Sbjct: 213 SLCDSGK---LKQAMEVLDRMLQRDCY---PDVITYTILIEATCRDSGVGHAMKL-LDEM 265
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
++ PDV TYN ++ + G L++M + +PN +T + + S ++
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
+ K+L M K G SP++ T+N+ I LC+ A +L+ M G +PN +S++
Sbjct: 326 MDAEKLLADMLRK-GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
L+HG+C E +D A + M RG P+ Y T+ LC+ G E A EI + KG
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 343 WVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
P T ++ GL KT A +L+ +++ K
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 150/334 (44%), Gaps = 12/334 (3%)
Query: 45 RILDICRAASLTPDFHLDRIALSVAISKLKDGNHFSTIDQFLRDLPTS--RPDLRNERFL 102
++LD R TPD + +V ++ + +FL D+P+S +P++ +
Sbjct: 260 KLLDEMRDRGCTPDV----VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNII 315
Query: 103 SQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFP 162
+S+ G R + +R F +PSV + N +L L K + L+
Sbjct: 316 LRSMCSTG--RWMDAEKLLADMLRKGF--SPSVVTFN-ILINFLCRKGLLGRAIDILEKM 370
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
+ QP+ +YN ++ F + L M P+ VT++ + + K
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
E+ ++L + K G SP L TYN I L K +T +A LL M + KP+ +++S
Sbjct: 431 EDAVEILNQLSSK-GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSS 489
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
L+ G EG +DEA K F + ++ G +P + + ++ LC+ + A + +++G
Sbjct: 490 LVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRG 549
Query: 343 WVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
PN T+ L+ GL +A EL+ ++ K
Sbjct: 550 CKPNETSYTILIEGLAYEGMAKEALELLNELCNK 583
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 4/181 (2%)
Query: 133 PSVKSLNALLFAALIAKDYK-EVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVY 191
P + + N +L A + KD K E + L+ + P + TYNTVI A++G T
Sbjct: 412 PDIVTYNTMLTA--LCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 192 SILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILS 251
+L EM ++P+ +T+S+ + G E K +E K E + G+ P T+N +L
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE-RMGIRPNAVTFNSIMLG 528
Query: 252 LCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPE 311
LCK ++T A L MI+ G KPN S++ LI G +EG EA ++ ++ +G +
Sbjct: 529 LCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKK 588
Query: 312 S 312
S
Sbjct: 589 S 589
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 4/208 (1%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
PD+ T+I+ F G T IL ++ + P+ +T++ I G+ K E+
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYC---KAGEINNA 191
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
L ++ ++ +SP + TYN + SLC + +A +L M+ P+ ++++ LI C
Sbjct: 192 LSVL-DRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATC 250
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
+ + A K+ +M+ RG P+ Y L + +C+ G + A + + G PN
Sbjct: 251 RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQVKEK 376
T ++ + + DA++L+ + K
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRK 338
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 64/141 (45%), Gaps = 3/141 (2%)
Query: 236 YGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDE 295
+G P + I C+L +T +A +L+ + G P+ ++++ +I GYC G ++
Sbjct: 131 HGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINN 190
Query: 296 AKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVT 355
A V M P+ Y T+ LC+ G + A E+ + + P+ T L+
Sbjct: 191 ALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIE 247
Query: 356 GLVGVSKTDDAKELIKQVKEK 376
S A +L+ +++++
Sbjct: 248 ATCRDSGVGHAMKLLDEMRDR 268
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 144/302 (47%), Gaps = 3/302 (0%)
Query: 72 KLKDGNHFSTIDQFLRDLPTSRPDLR-NERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQ 130
KL F ++ + DL S P ++ E + YG A +++ F R+ D F
Sbjct: 92 KLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPD-FG 150
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
+ SV+SLN LL + + + V ++ + +++ I P++ T N ++K+ + S
Sbjct: 151 VKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESA 210
Query: 191 YSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRIL 250
Y +L E+ + PN VT++ + G+ + E +VL+ M ++ G P +TY V +
Sbjct: 211 YKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDR-GWYPDATTYTVLMD 269
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
CKL R SEA ++ M +PN V++ +I C E EA+ +F +M +R + P
Sbjct: 270 GYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMP 329
Query: 311 ESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELI 370
+S + LCE + A + ++ + +P+ + L+ L + +A++L
Sbjct: 330 DSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLF 389
Query: 371 KQ 372
+
Sbjct: 390 DE 391
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 124/289 (42%), Gaps = 36/289 (12%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
+ P++ + +L + D + R+ L+ + PD TY ++ + + G S
Sbjct: 222 LVPNLVTYTTILGGYVARGDMESAKRV-LEEMLDRGWYPDATTYTVLMDGYCKLGRFSEA 280
Query: 191 YSILSEMDRNSVRPNAVTFSNAIEGFYSEKK-------FEEV------------GKVLKM 231
+++ +M++N + PN VT+ I EKK F+E+ KV+
Sbjct: 281 ATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDA 340
Query: 232 MEEKYGMSPALSTY---------------NVRILSLCKLKRTSEAKALLQGMISGGRKPN 276
+ E + + A + + I LCK R +EA+ L G P+
Sbjct: 341 LCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIPS 399
Query: 277 WVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITK 336
++++ LI G C +G L EA +++ DM +R KP + Y L L + G+ + + +
Sbjct: 400 LLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLE 459
Query: 337 ESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTESSDKWD 385
E ++ G PN TT L GL + K +DA +++ + W+
Sbjct: 460 EMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKVDKESWE 508
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 119/247 (48%), Gaps = 3/247 (1%)
Query: 132 TPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYS-IQPDVETYNTVIKSFAESGSTSSV 190
T + + +++LF A+ + V + D +Y I+ + +++++ +G S
Sbjct: 80 THNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESS 139
Query: 191 YSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRIL 250
I + V+ + + + + ++F+ V + K +E +G++P + T N+ +
Sbjct: 140 MRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVK 199
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
+LCK A +L + S G PN V+++ ++ GY G+++ AK+V +M RG+ P
Sbjct: 200 ALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYP 259
Query: 311 ESPCYFTLAHFLCEGGDFESAFEITKESMDKGWV-PNFTTMKKLVTGLVGVSKTDDAKEL 369
++ Y L C+ G F A + + M+K + PN T ++ L K+ +A+ +
Sbjct: 260 DATTYTVLMDGYCKLGRFSEAATVM-DDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNM 318
Query: 370 IKQVKEK 376
++ E+
Sbjct: 319 FDEMLER 325
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 105/226 (46%), Gaps = 12/226 (5%)
Query: 161 FPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAV---TFSNAIEGFY 217
F NY +TY++++ + + + V S+++++ RNS P F + + +
Sbjct: 79 FTHNY------DTYHSILFKLSRARAFDPVESLMADL-RNSYPPIKCGENLFIDLLRNYG 131
Query: 218 SEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMI-SGGRKPN 276
++E ++ + + +G+ ++ + N + L + +R A+ + S G PN
Sbjct: 132 LAGRYESSMRIFLRIPD-FGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPN 190
Query: 277 WVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITK 336
+ + L+ C + +++ A KV ++ G P Y T+ GD ESA + +
Sbjct: 191 IFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLE 250
Query: 337 ESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTESSD 382
E +D+GW P+ TT L+ G + + +A ++ +++ E ++
Sbjct: 251 EMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNE 296
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 123/262 (46%), Gaps = 7/262 (2%)
Query: 114 MLPNAVTAFTRMRDEFQITPSVKSLNALL--FAALIAKDYKEVSRIYLDFPKNYSIQPDV 171
ML A+ F++M+ F++ P +S N LL FA L D +V R + D +P V
Sbjct: 207 MLEEAIQCFSKMK-RFRVFPKTRSCNGLLHRFAKLGKTD--DVKRFFKDMI-GAGARPTV 262
Query: 172 ETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKM 231
TYN +I + G + + EM + P+ VT+++ I+GF + ++ +
Sbjct: 263 FTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEE 322
Query: 232 MEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEG 291
M++ P + TYN I CK + + M G KPN VS+S L+ +C EG
Sbjct: 323 MKD-MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG 381
Query: 292 NLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMK 351
+ +A K + DM++ G P Y +L C+ G+ AF + E + G N T
Sbjct: 382 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYT 441
Query: 352 KLVTGLVGVSKTDDAKELIKQV 373
L+ GL + +A+EL ++
Sbjct: 442 ALIDGLCDAERMKEAEELFGKM 463
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 1/213 (0%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
K+ +PDV TYN +I F + G EM N ++PN V++S ++ F E
Sbjct: 324 KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMM 383
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
++ K M + G+ P TY I + CK+ S+A L M+ G + N V+++
Sbjct: 384 QQAIKFYVDMR-RVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 442
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
LI G C + EA+++F M G P Y L H + + + A E+ E +G
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 502
Query: 343 WVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
P+ + GL + K + AK ++ ++KE
Sbjct: 503 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKE 535
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 122/276 (44%), Gaps = 21/276 (7%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALL-----FAAL-IAKD-YKEVSRIYLDF 161
+G+ L + V F M+D P V + NAL+ F L I + Y+E+
Sbjct: 307 FGKVGRLDDTVCFFEEMKD-MCCEPDVITYNALINCFCKFGKLPIGLEFYREM------- 358
Query: 162 PKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKK 221
K ++P+V +Y+T++ +F + G +M R + PN T+++ I+ + K
Sbjct: 359 -KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID---ANCK 414
Query: 222 FEEVGKVLKMMEE--KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVS 279
+ ++ E + G+ + TY I LC +R EA+ L M + G PN S
Sbjct: 415 IGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS 474
Query: 280 FSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESM 339
++ LIHG+ N+D A ++ ++K RG KP+ Y T LC E+A + E
Sbjct: 475 YNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMK 534
Query: 340 DKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
+ G N L+ + L+ ++KE
Sbjct: 535 ECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKE 570
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 120/287 (41%), Gaps = 6/287 (2%)
Query: 91 TSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKD 150
PD+ L +G+ LP + + M+ + P+V S + L+ A
Sbjct: 327 CCEPDVITYNALINCFCKFGK---LPIGLEFYREMKGN-GLKPNVVSYSTLVDAFCKEGM 382
Query: 151 YKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFS 210
++ + Y+D + + P+ TY ++I + + G+ S + + +EM + V N VT++
Sbjct: 383 MQQAIKFYVDM-RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYT 441
Query: 211 NAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMIS 270
I+G ++ +E ++ M+ G+ P L++YN I K K A LL +
Sbjct: 442 ALIDGLCDAERMKEAEELFGKMDTA-GVIPNLASYNALIHGFVKAKNMDRALELLNELKG 500
Query: 271 GGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFES 330
G KP+ + + I G C ++ AK V +MK+ G K S Y TL + G+
Sbjct: 501 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560
Query: 331 AFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKF 377
+ E + T L+ GL A + ++ F
Sbjct: 561 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF 607
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 92/217 (42%)
Query: 153 EVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNA 212
E +++ ++ K I+ + Y T++ ++ +SG+ + +L EM + VTF
Sbjct: 524 EAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVL 583
Query: 213 IEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGG 272
I+G K + + +G+ + + I LCK + A L + M+ G
Sbjct: 584 IDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKG 643
Query: 273 RKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAF 332
P+ +++ L+ G +GN+ EA + M + G K + Y +L L + A
Sbjct: 644 LVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKAR 703
Query: 333 EITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKEL 369
+E + +G P+ ++ + D+A EL
Sbjct: 704 SFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 82/200 (41%), Gaps = 2/200 (1%)
Query: 175 NTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE 234
N+V+K S + V+ +L RN P F EE + M+
Sbjct: 162 NSVLKEMVLSKADCDVFDVLWST-RNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMK- 219
Query: 235 KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLD 294
++ + P + N + KL +T + K + MI G +P +++ +I C EG+++
Sbjct: 220 RFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVE 279
Query: 295 EAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
A+ +F +MK RG P++ Y ++ + G + +E D P+ T L+
Sbjct: 280 AARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALI 339
Query: 355 TGLVGVSKTDDAKELIKQVK 374
K E +++K
Sbjct: 340 NCFCKFGKLPIGLEFYREMK 359
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 58/140 (41%)
Query: 240 PALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKV 299
P ++ L L EA M P S + L+H + G D+ K+
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 300 FADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVG 359
F DM G +P Y + +C+ GD E+A + +E +G VP+ T ++ G
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 360 VSKTDDAKELIKQVKEKFTE 379
V + DD +++K+ E
Sbjct: 310 VGRLDDTVCFFEEMKDMCCE 329
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 163/368 (44%), Gaps = 21/368 (5%)
Query: 3 SRLRHSLRRYSTILSPNSSTPLTAKEKSRTALHLLKSETNPERILDICRAASLTPDFHLD 62
+RLRH L+PN L + + +P +L + S D+
Sbjct: 52 ARLRHK-----DWLAPNE------------VLKIFDNVKDPSFLLPAYQHYSKRKDYQPT 94
Query: 63 RIALSVAISKLKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQ-ARMLPNAVTA 121
++ I+K + I++ +R + + +E F + +YG A + A+
Sbjct: 95 ESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEI 154
Query: 122 FTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSF 181
M D F PS KS N +L + AK + E+ +I++ PK ++ D N +IK
Sbjct: 155 LFGMPD-FGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPK-LGVEIDACCLNILIKGL 212
Query: 182 AESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPA 241
ESG+ + +L E + RPN +TFS I GF ++ KFEE K+L+ ME K + P
Sbjct: 213 CESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERME-KERIEPD 271
Query: 242 LSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFA 301
T+N+ I L K R E LL+ M G +PN ++ +++G + EAK++ +
Sbjct: 272 TITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMS 331
Query: 302 DMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVS 361
M G +P Y + LCE + ++ ++ G+VP K+V +V +
Sbjct: 332 QMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSKN 391
Query: 362 KTDDAKEL 369
D L
Sbjct: 392 NDDSQANL 399
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 113/249 (45%), Gaps = 4/249 (1%)
Query: 126 RDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAE-S 184
R ++Q T S+ +L F AK Y E+ + + E + +++ + +
Sbjct: 88 RKDYQPTESLYALMINKFGQ--AKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLA 145
Query: 185 GSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALST 244
G + IL M P++ +F+ + S K F+E+ K+ + K G+
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIF-VSAPKLGVEIDACC 204
Query: 245 YNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMK 304
N+ I LC+ A LL +PN ++FS LI G+C +G +EA K+ M+
Sbjct: 205 LNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERME 264
Query: 305 KRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTD 364
K +P++ + L L + G E ++ + KG PN T ++++ GL+ +
Sbjct: 265 KERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNL 324
Query: 365 DAKELIKQV 373
+AKE++ Q+
Sbjct: 325 EAKEMMSQM 333
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 1/182 (0%)
Query: 199 RNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMME-EKYGMSPALSTYNVRILSLCKLKR 257
R +P ++ I F K ++E+ +V++ ++ EK YN+ + R
Sbjct: 88 RKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGR 147
Query: 258 TSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFT 317
+ A +L GM G P+ SF+ +++ DE K+F K G + ++ C
Sbjct: 148 INRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNI 207
Query: 318 LAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKF 377
L LCE G+ E+A ++ E + PN T L+ G K ++A +L+++++++
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 378 TE 379
E
Sbjct: 268 IE 269
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 104/211 (49%), Gaps = 1/211 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
+I PDV T++ +I F + G + +EM + P+ +T+++ I+GF E E
Sbjct: 310 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEA 369
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
++ +M K G P + TY++ I S CK KR + L + + S G PN ++++ L+
Sbjct: 370 NQMFDLMVSK-GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 428
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
G+C G L+ AK++F +M RG P Y L LC+ G+ A EI ++
Sbjct: 429 GFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL 488
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
++ G+ SK DDA L + +K
Sbjct: 489 GIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 519
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 110/246 (44%), Gaps = 2/246 (0%)
Query: 130 QITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSS 189
I P V + +AL+ + E +Y + I PD TYN++I F +
Sbjct: 310 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR-GIAPDTITYNSLIDGFCKENCLHE 368
Query: 190 VYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRI 249
+ M P+ VT+S I + K+ ++ ++ + + K G+ P TYN +
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK-GLIPNTITYNTLV 427
Query: 250 LSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYK 309
L C+ + + AK L Q M+S G P+ V++ L+ G C G L++A ++F M+K
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Query: 310 PESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKEL 369
Y + H +C + A+ + DKG P+ T ++ GL +A L
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 547
Query: 370 IKQVKE 375
+++KE
Sbjct: 548 FRKMKE 553
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 119/259 (45%), Gaps = 3/259 (1%)
Query: 118 AVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTV 177
AV RM E + P + +++ L+ L K + + +D Y QPD TY V
Sbjct: 159 AVALVDRMV-EMKQRPDLVTVSTLI-NGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPV 216
Query: 178 IKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYG 237
+ +SG+++ + +M+ +++ + V +S I+ + F++ + ME K G
Sbjct: 217 LNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK-G 275
Query: 238 MSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAK 297
+ + TY+ I LC + + +L+ MI P+ V+FS LI + EG L EAK
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335
Query: 298 KVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGL 357
+++ +M RG P++ Y +L C+ A ++ + KG P+ T L+
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395
Query: 358 VGVSKTDDAKELIKQVKEK 376
+ DD L +++ K
Sbjct: 396 CKAKRVDDGMRLFREISSK 414
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 1/206 (0%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
+PD T++T++ F G S +++ M RP+ VT S I G + + E
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
++ M E YG P TY + LCK ++ A L + M K + V +S +I
Sbjct: 197 LIDRMVE-YGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSL 255
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
C +G+ D+A +F +M+ +G K + Y +L LC G ++ ++ +E + + +P+
Sbjct: 256 CKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDV 315
Query: 348 TTMKKLVTGLVGVSKTDDAKELIKQV 373
T L+ V K +AKEL ++
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEM 341
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 109/224 (48%), Gaps = 6/224 (2%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
P + + + L+ + AK + R++ + + P+ TYNT++ F +SG ++
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSK-GLIPNTITYNTLVLGFCQSGKLNAAKE 441
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMME--EKYGMSPALSTYNVRIL 250
+ EM V P+ VT+ ++G E+ K L++ E +K M+ + YN+ I
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNG---ELNKALEIFEKMQKSRMTLGIGIYNIIIH 498
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
+C + +A +L + G KP+ V+++ +I G C +G+L EA +F MK+ G P
Sbjct: 499 GMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP 558
Query: 311 ESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
+ Y L G S+ E+ +E G+ + +T+K ++
Sbjct: 559 DDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 602
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 107/245 (43%), Gaps = 10/245 (4%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNY---SIQPDVETYNTVIKSFAESGSTSS 189
P+ N L A K Y V L F K I+ D+ T +I +
Sbjct: 68 PTPIDFNRLCSAVARTKQYDLV----LGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLF 123
Query: 190 VYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEE-VGKVLKMMEEKYGMSPALSTYNVR 248
+S+L + P+ +TFS + GF E + E V V +M+E K P L T +
Sbjct: 124 AFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK--QRPDLVTVSTL 181
Query: 249 ILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGY 308
I LC R SEA L+ M+ G +P+ V++ +++ C GN A +F M++R
Sbjct: 182 INGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNI 241
Query: 309 KPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKE 368
K Y + LC+ G F+ A + E KG + T L+ GL K DD +
Sbjct: 242 KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAK 301
Query: 369 LIKQV 373
+++++
Sbjct: 302 MLREM 306
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 93/207 (44%), Gaps = 9/207 (4%)
Query: 174 YNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKK----FEEVGKVL 229
+N + + A + V M+ N + + T + I + +KK F +G+
Sbjct: 73 FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAW 132
Query: 230 KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW 289
K+ G P T++ + C R SEA AL+ M+ ++P+ V+ S LI+G C
Sbjct: 133 KL-----GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCL 187
Query: 290 EGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTT 349
+G + EA + M + G++P+ Y + + LC+ G+ A ++ ++ ++ +
Sbjct: 188 KGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 247
Query: 350 MKKLVTGLVGVSKTDDAKELIKQVKEK 376
++ L DDA L +++ K
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMK 274
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 82/178 (46%), Gaps = 1/178 (0%)
Query: 204 PNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKA 263
P + F+ K+++ V K ME G+ + T + I C+ K+ A +
Sbjct: 68 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELN-GIEHDMYTMTIMINCYCRKKKLLFAFS 126
Query: 264 LLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLC 323
+L G +P+ ++FS L++G+C EG + EA + M + +P+ TL + LC
Sbjct: 127 VLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLC 186
Query: 324 EGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTESS 381
G A + ++ G+ P+ T ++ L + A +L ++++E+ ++S
Sbjct: 187 LKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKAS 244
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 136/277 (49%), Gaps = 10/277 (3%)
Query: 92 SRPDLRNERFLSQSIVLYGQARM--LPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAK 149
+PDL ++ IV+ G + + A++ +M ++ +I P V N ++ A K
Sbjct: 217 CQPDL-----VTYGIVVNGLCKRGDIDLALSLLKKM-EQGKIEPGVVIYNTIIDALCNYK 270
Query: 150 DYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTF 209
+ + ++ + N I+P+V TYN++I+ G S +LS+M + PN VTF
Sbjct: 271 NVNDALNLFTEM-DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 329
Query: 210 SNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMI 269
S I+ F E K E K+ M ++ + P + TY+ I C R EAK + + MI
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 270 SGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFE 329
S PN V+++ LI G+C +DE ++F +M +RG + Y TL H + + +
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECD 448
Query: 330 SAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDA 366
+A + K+ + G +P+ T L+ GL K + A
Sbjct: 449 NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA 485
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 1/209 (0%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
QPD+ TY V+ + G S+L +M++ + P V ++ I+ + K +
Sbjct: 218 QPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALN 277
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
+ M+ K G+ P + TYN I LC R S+A LL MI PN V+FS LI +
Sbjct: 278 LFTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
EG L EA+K++ +M KR P+ Y +L + C + A + + + K PN
Sbjct: 337 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 396
Query: 348 TTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
T L+ G + D+ EL +++ ++
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQR 425
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 115/253 (45%), Gaps = 3/253 (1%)
Query: 117 NAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNT 176
+A+ FT M D I P+V + N+L+ + + SR+ D + I P+V T++
Sbjct: 274 DALNLFTEM-DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFSA 331
Query: 177 VIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKY 236
+I +F + G + EM + S+ P+ T+S+ I GF + +E + ++M K
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK- 390
Query: 237 GMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEA 296
P + TYN I CK KR E L + M G N V+++ LIHG+ D A
Sbjct: 391 DCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNA 450
Query: 297 KKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTG 356
+ VF M G P+ Y L LC G E+A + + P+ T ++ G
Sbjct: 451 QIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEG 510
Query: 357 LVGVSKTDDAKEL 369
+ K +D +L
Sbjct: 511 MCKAGKVEDGWDL 523
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 1/207 (0%)
Query: 167 IQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVG 226
I+P V YNT+I + + + ++ +EMD +RPN VT+++ I + ++ +
Sbjct: 252 IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 311
Query: 227 KVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHG 286
++L M E+ ++P + T++ I + K + EA+ L MI P+ ++S LI+G
Sbjct: 312 RLLSDMIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 370
Query: 287 YCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPN 346
+C LDEAK +F M + P Y TL C+ + E+ +E +G V N
Sbjct: 371 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGN 430
Query: 347 FTTMKKLVTGLVGVSKTDDAKELIKQV 373
T L+ G + D+A+ + KQ+
Sbjct: 431 TVTYTTLIHGFFQARECDNAQIVFKQM 457
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 135/288 (46%), Gaps = 14/288 (4%)
Query: 93 RPDLRNERFLSQSIVLYGQ----ARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIA 148
RP++ L + + YG+ +R+L + + E +I P+V + +AL+ A +
Sbjct: 288 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMI--------ERKINPNVVTFSALIDAFVKE 339
Query: 149 KDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVT 208
E ++Y + K SI PD+ TY+++I F + M PN VT
Sbjct: 340 GKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 398
Query: 209 FSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGM 268
++ I+GF K+ +E ++ + M ++ G+ TY I + + A+ + + M
Sbjct: 399 YNTLIKGFCKAKRVDEGMELFREMSQR-GLVGNTVTYTTLIHGFFQARECDNAQIVFKQM 457
Query: 269 ISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDF 328
+S G P+ +++S L+ G C G ++ A VF +++ +P+ Y + +C+ G
Sbjct: 458 VSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 517
Query: 329 ESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
E +++ KG PN T +++G ++A L +++KE+
Sbjct: 518 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 1/214 (0%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
+N I ++ TY+ +I F S ++L++M + P+ VT ++ + GF +
Sbjct: 108 QNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRI 167
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
+ ++ M E G P T+N I L + R SEA AL+ M+ G +P+ V++
Sbjct: 168 SDAVSLVGQMVE-MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
+++G C G++D A + M++ +P Y T+ LC + A + E +KG
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 343 WVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
PN T L+ L + DA L+ + E+
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 320
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 99/209 (47%), Gaps = 1/209 (0%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
+PD+ T N+++ F S S++ +M +P++ TF+ I G + + E
Sbjct: 148 EPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVA 207
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
++ M K G P L TY + + LCK A +LL+ M G +P V ++ +I
Sbjct: 208 LVDRMVVK-GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
C N+++A +F +M +G +P Y +L LC G + A + + +++ PN
Sbjct: 267 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 326
Query: 348 TTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
T L+ V K +A++L ++ ++
Sbjct: 327 VTFSALIDAFVKEGKLVEAEKLYDEMIKR 355
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 98/206 (47%), Gaps = 1/206 (0%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P+V TYNT+IK F ++ + EM + + N VT++ I GF+ ++ + V
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
K M G+ P + TY++ + LC + A + + + +P+ +++ +I G C
Sbjct: 454 FKQMVSD-GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMC 512
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
G +++ +F + +G KP Y T+ C G E A + +E ++G +P+
Sbjct: 513 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSG 572
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQVK 374
T L+ + + ELI++++
Sbjct: 573 TYNTLIRAHLRDGDKAASAELIREMR 598
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 114/232 (49%), Gaps = 3/232 (1%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
P+V + N L+ AK E ++ + + + V TY T+I F ++ +
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV-TYTTLIHGFFQARECDNAQI 452
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
+ +M + V P+ +T+S ++G + K E V + ++ + M P + TYN+ I +
Sbjct: 453 VFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ-RSKMEPDIYTYNIMIEGM 511
Query: 253 CKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPES 312
CK + + L + G KPN V+++ ++ G+C +G +EA +F +MK+ G P+S
Sbjct: 512 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDS 571
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTD 364
Y TL GD ++ E+ +E +V + +T+ LVT ++ + D
Sbjct: 572 GTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GLVTNMLHDGRLD 622
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 1/184 (0%)
Query: 192 SILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILS 251
++ +M ++ P+ V FS + KF+ V + + M+ G+S L TY++ I
Sbjct: 67 NLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQN-LGISHNLYTYSILINC 125
Query: 252 LCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPE 311
C+ + S A A+L M+ G +P+ V+ + L++G+C + +A + M + GY+P+
Sbjct: 126 FCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPD 185
Query: 312 SPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIK 371
S + TL H L A + + KG P+ T +V GL D A L+K
Sbjct: 186 SFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLK 245
Query: 372 QVKE 375
++++
Sbjct: 246 KMEQ 249
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 143/310 (46%), Gaps = 8/310 (2%)
Query: 59 FHLDRIALSVAISKLKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNA 118
F D + S I KL +F +DQ LR + R F+ I YG+A + A
Sbjct: 77 FRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL-IQHYGKAGSVDKA 135
Query: 119 VTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVI 178
+ F ++ F +++SLN L+ L+ E ++ + D K+ ++P+ ++N +I
Sbjct: 136 IDVFHKI-TSFDCVRTIQSLNTLI-NVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILI 193
Query: 179 KSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE--KY 236
K F + + + EM V+P+ VT+ N++ GF +++GK ++E+ K
Sbjct: 194 KGFLDKCDWEAACKVFDEMLEMEVQPSVVTY-NSLIGFLCRN--DDMGKAKSLLEDMIKK 250
Query: 237 GMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEA 296
+ P T+ + + LC +EAK L+ M G KP V++ L+ G +DEA
Sbjct: 251 RIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEA 310
Query: 297 KKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTG 356
K + +MKKR KP+ Y L + LC A+ + E KG PN T + ++ G
Sbjct: 311 KLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDG 370
Query: 357 LVGVSKTDDA 366
+ D
Sbjct: 371 FCRIEDFDSG 380
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 120/247 (48%), Gaps = 4/247 (1%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPK-NYSIQPDVETYNTVIKSFAESGSTSS 189
+ P ++ +L+ K+ ++ + ++ K N I P TY TV+K SG
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISP--YTYGTVVKGMCSSGDLDG 435
Query: 190 VYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRI 249
Y+I+ EM + RPN V ++ I+ F +F + +VLK M+E+ G++P + YN I
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ-GIAPDIFCYNSLI 494
Query: 250 LSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYK 309
+ L K KR EA++ L M+ G KPN ++ I GY A K +M++ G
Sbjct: 495 IGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL 554
Query: 310 PESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKEL 369
P L + C+ G A + +D+G + + T L+ GL K DDA+E+
Sbjct: 555 PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614
Query: 370 IKQVKEK 376
++++ K
Sbjct: 615 FREMRGK 621
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 3/205 (1%)
Query: 173 TYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV-GKVLKM 231
TY+ +I + S+L EMD V + T+S I+G + + G V +M
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 232 MEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEG 291
+ + P + Y+ I + K +AKAL GMI+ G P +++ LI GYC E
Sbjct: 339 VSHGINIKPYM--YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREK 396
Query: 292 NLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMK 351
N+ + ++ +MKKR Y T+ +C GD + A+ I KE + G PN
Sbjct: 397 NVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYT 456
Query: 352 KLVTGLVGVSKTDDAKELIKQVKEK 376
L+ + S+ DA ++K++KE+
Sbjct: 457 TLIKTFLQNSRFGDAMRVLKEMKEQ 481
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 120/291 (41%), Gaps = 38/291 (13%)
Query: 111 QARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPD 170
Q +A+ M+++ I P + N+L+ AK E ++ +N ++P+
Sbjct: 464 QNSRFGDAMRVLKEMKEQ-GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN-GLKPN 521
Query: 171 VETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAV----------------------- 207
TY I + E+ +S + EM V PN V
Sbjct: 522 AFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYR 581
Query: 208 ------------TFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKL 255
T++ + G + K ++ ++ + M K G++P + +Y V I KL
Sbjct: 582 SMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK-GIAPDVFSYGVLINGFSKL 640
Query: 256 KRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCY 315
+A ++ M+ G PN + ++ L+ G+C G +++AK++ +M +G P + Y
Sbjct: 641 GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700
Query: 316 FTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDA 366
T+ C+ GD AF + E KG VP+ LV G ++ + A
Sbjct: 701 CTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 2/210 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
I D +TY ++ ++ I EM + P+ ++ I GF ++
Sbjct: 587 GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
+ M E+ G++P + YN+ + C+ +AK LL M G PN V++ +I
Sbjct: 647 SSIFDEMVEE-GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIID 705
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
GYC G+L EA ++F +MK +G P+S Y TL C D E A I + KG
Sbjct: 706 GYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCAS 764
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
+ L+ + KT+ E++ ++ +
Sbjct: 765 STAPFNALINWVFKFGKTELKTEVLNRLMD 794
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 120/281 (42%), Gaps = 10/281 (3%)
Query: 102 LSQSIVLYGQARM--LPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYL 159
S +++ G +++ + A + F M +E +TP+V N LL E ++ L
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEE-GLTPNVIIYNMLL-GGFCRSGEIEKAKELL 685
Query: 160 DFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSE 219
D + P+ TY T+I + +SG + + + EM + P++ ++ ++G
Sbjct: 686 DEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRL 745
Query: 220 KKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGG----RKP 275
E + K G + + + +N I + K +T +L ++ G KP
Sbjct: 746 NDVERAITIFG--TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKP 803
Query: 276 NWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEIT 335
N V+++ +I C EGNL+ AK++F M+ P Y +L + + G F +
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863
Query: 336 KESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
E++ G P+ ++ + T A L+ Q+ K
Sbjct: 864 DEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 144/340 (42%), Gaps = 39/340 (11%)
Query: 68 VAISKLKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRD 127
V I KL F TID+ L + + F+S + Y +A MR+
Sbjct: 116 VLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFIS-IMRDYDKAGFPGQTTRLMLEMRN 174
Query: 128 EFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGST 187
+ P+ KS N +L + +K + ++ D I P + T+ V+K+F
Sbjct: 175 VYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSR-KIPPTLFTFGVVMKAFCAVNEI 233
Query: 188 SSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKY--GMSPALSTY 245
S S+L +M ++ PN+V + I +S K V + L+++EE + G P T+
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQTLI---HSLSKCNRVNEALQLLEEMFLMGCVPDAETF 290
Query: 246 NVRILSLCKLKRTSEAKA-------------------LLQGMISGGR------------K 274
N IL LCK R +EA L+ G+ GR K
Sbjct: 291 NDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK 350
Query: 275 PNWVSFSHLIHGYCWEGNLDEAKKVFADM-KKRGYKPESPCYFTLAHFLCEGGDFESAFE 333
P V F+ LIHG+ G LD+AK V +DM G P+ Y +L + + G A E
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALE 410
Query: 334 ITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
+ + +KG PN + LV G + K D+A ++ ++
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM 450
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 134/317 (42%), Gaps = 40/317 (12%)
Query: 93 RPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYK 152
+P++ L V +G+ L +A + M + I P V + N+L++
Sbjct: 350 KPEIVIFNTLIHGFVTHGR---LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVG 406
Query: 153 EVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNA 212
+ D +N +P+V +Y ++ F + G Y++L+EM + ++PN V F+
Sbjct: 407 LALEVLHDM-RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465
Query: 213 IEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGG 272
I F E + E ++ + M K G P + T+N I LC++ A LL+ MIS G
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRK-GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 273 RKPNWVSFS-----------------------------------HLIHGYCWEGNLDEAK 297
N V+++ LI G C G +D+A+
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584
Query: 298 KVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGL 357
+F M + G+ P + L + LC G E A E KE + +G P+ T L+ GL
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644
Query: 358 VGVSKTDDAKELIKQVK 374
+ +D + ++++
Sbjct: 645 CRAGRIEDGLTMFRKLQ 661
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 91/205 (44%), Gaps = 4/205 (1%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
PD TY ++ + G + + + + P V F+ I GF + + ++ V
Sbjct: 320 PDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAV 375
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
L M YG+ P + TYN I K A +L M + G KPN S++ L+ G+C
Sbjct: 376 LSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFC 435
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
G +DEA V +M G KP + + L C+ A EI +E KG P+
Sbjct: 436 KLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVY 495
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQV 373
T L++GL V + A L++ +
Sbjct: 496 TFNSLISGLCEVDEIKHALWLLRDM 520
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 115/245 (46%), Gaps = 5/245 (2%)
Query: 115 LPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETY 174
+P AV F M + P V + N+L+ + K + D + + TY
Sbjct: 475 IPEAVEIFREMPRK-GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE-GVVANTVTY 532
Query: 175 NTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL-KMME 233
NT+I +F G +++EM + +T+++ I+G + ++ + KM+
Sbjct: 533 NTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLR 592
Query: 234 EKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNL 293
+ G +P+ + N+ I LC+ EA + M+ G P+ V+F+ LI+G C G +
Sbjct: 593 D--GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650
Query: 294 DEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKL 353
++ +F ++ G P++ + TL +LC+GG A + E ++ G+VPN T L
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSIL 710
Query: 354 VTGLV 358
+ ++
Sbjct: 711 LQSII 715
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 81/202 (40%)
Query: 172 ETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKM 231
+ Y +I +G ++ +L +M + F + + + + +++
Sbjct: 112 DVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLE 171
Query: 232 MEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEG 291
M Y P +YNV + L A + M+S P +F ++ +C
Sbjct: 172 MRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVN 231
Query: 292 NLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMK 351
+D A + DM K G P S Y TL H L + A ++ +E G VP+ T
Sbjct: 232 EIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFN 291
Query: 352 KLVTGLVGVSKTDDAKELIKQV 373
++ GL + ++A +++ ++
Sbjct: 292 DVILGLCKFDRINEAAKMVNRM 313
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 124/265 (46%), Gaps = 7/265 (2%)
Query: 112 ARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDV 171
+RM+ A + M E I P+V + N +L + A D + V +I+L+ K +I+
Sbjct: 216 SRMMNKASAVYETMI-EHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEM-KRRNIEFSE 273
Query: 172 ETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKM 231
TYN +I F+++G +M R+ +F+ IEG+ + F++ V
Sbjct: 274 VTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDE 333
Query: 232 MEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEG 291
M G+ P STYN+ I +LC R +A+ LL M + P+ VS++ L+HGY G
Sbjct: 334 MLNA-GIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMG 388
Query: 292 NLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMK 351
EA +F D++ P Y TL LCE G+ E A + +E + P+ T
Sbjct: 389 KFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYT 448
Query: 352 KLVTGLVGVSKTDDAKELIKQVKEK 376
LV G V A E+ ++ K
Sbjct: 449 TLVKGFVKNGNLSMATEVYDEMLRK 473
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 141/305 (46%), Gaps = 18/305 (5%)
Query: 79 FSTIDQFLRDLPTSR--PDLRNERFLSQSIVLYGQARM--LPNAVTAFTRMRDEFQITPS 134
F ID R+L +S PD+ +S + +++G +M A F +R I PS
Sbjct: 356 FGRIDD-ARELLSSMAAPDV-----VSYNTLMHGYIKMGKFVEASLLFDDLRAG-DIHPS 408
Query: 135 VKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSIL 194
+ + N L+ + + + R+ + I PDV TY T++K F ++G+ S +
Sbjct: 409 IVTYNTLIDGLCESGNLEGAQRLKEEMTTQL-IFPDVITYTTLVKGFVKNGNLSMATEVY 467
Query: 195 SEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGM---SPALSTYNVRILS 251
EM R ++P+ ++ G E + + K ++ EE +P L+ YNVRI
Sbjct: 468 DEMLRKGIKPDGYAYTTRAVG---ELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDG 524
Query: 252 LCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPE 311
LCK+ +A + + G P+ V+++ +I GY G A+ ++ +M ++ P
Sbjct: 525 LCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPS 584
Query: 312 SPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIK 371
YF L + + G E AF+ + E +G PN T L+ G+ D+A +
Sbjct: 585 VITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLC 644
Query: 372 QVKEK 376
+++E+
Sbjct: 645 KMEEE 649
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 1/189 (0%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
PD+ YN I + G+ ++ R + P+ VT++ I G+ +F+ +
Sbjct: 513 PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNL 572
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
M K + P++ TY V I K R +A M G +PN ++ + L++G C
Sbjct: 573 YDEMLRK-RLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMC 631
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
GN+DEA + M++ G P Y L C+ +E ++ KE +DK P+
Sbjct: 632 KAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGY 691
Query: 349 TMKKLVTGL 357
T + L L
Sbjct: 692 THRALFKHL 700
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 86/206 (41%), Gaps = 5/206 (2%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P V N V+K +S + ++ M + + P +TF+ ++ + E V K+
Sbjct: 201 PSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKI 260
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
M+ + + + TYN+ I K + EA+ M G SF+ LI GYC
Sbjct: 261 WLEMKRR-NIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYC 319
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
+G D+A V +M G P + Y LC+ G + A +E + P+
Sbjct: 320 KQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA----RELLSSMAAPDVV 375
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQVK 374
+ L+ G + + K +A L ++
Sbjct: 376 SYNTLMHGYIKMGKFVEASLLFDDLR 401
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 1/210 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
I+ V TYN++++ ++G + +L +M + PN +TF+ ++ F E K +E
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
++ K M + G+SP + TYN + C R SEA +L M+ P+ V+F+ LI
Sbjct: 318 NELYKEMITR-GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIK 376
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
GYC +D+ KVF ++ KRG + Y L C+ G + A E+ +E + G +P
Sbjct: 377 GYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 436
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
+ T L+ GL K + A E+ + +++
Sbjct: 437 DVMTYGILLDGLCDNGKLEKALEIFEDLQK 466
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 126/253 (49%), Gaps = 2/253 (0%)
Query: 130 QITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSS 189
+I P+V + N LL + +E + +Y + I P++ TYNT++ + S
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR-GISPNIITYNTLMDGYCMQNRLSE 351
Query: 190 VYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRI 249
++L M RN P+ VTF++ I+G+ K+ ++ KV + + K G+ TY++ +
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS-KRGLVANAVTYSILV 410
Query: 250 LSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYK 309
C+ + A+ L Q M+S G P+ +++ L+ G C G L++A ++F D++K
Sbjct: 411 QGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 470
Query: 310 PESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKEL 369
Y T+ +C+GG E A+ + KG PN T +++GL +A L
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 530
Query: 370 IKQVKEKFTESSD 382
+++++E +D
Sbjct: 531 LRKMEEDGNAPND 543
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 111/244 (45%), Gaps = 2/244 (0%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
P + N L+ + E + + +D QPDV TYN+++ SG TS
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSE-AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
+L +M+ +V+ + T+S I+ + + + K ME K G+ ++ TYN + L
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK-GIKSSVVTYNSLVRGL 273
Query: 253 CKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPES 312
CK + ++ LL+ M+S PN ++F+ L+ + EG L EA +++ +M RG P
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 333
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQ 372
Y TL C A + + P+ T L+ G V + DD ++ +
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393
Query: 373 VKEK 376
+ ++
Sbjct: 394 ISKR 397
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 4/220 (1%)
Query: 157 IYLDFPKNY---SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAI 213
+ LDF K I ++ T N +I F T YS+L ++ + P+ TF+ I
Sbjct: 106 LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLI 165
Query: 214 EGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGR 273
+G + E K E ++ M E G P + TYN + +C+ TS A LL+ M
Sbjct: 166 KGLFLEGKVSEAVVLVDRMVEN-GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNV 224
Query: 274 KPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFE 333
K + ++S +I C +G +D A +F +M+ +G K Y +L LC+ G +
Sbjct: 225 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL 284
Query: 334 ITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
+ K+ + + VPN T L+ V K +A EL K++
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 109/235 (46%), Gaps = 6/235 (2%)
Query: 130 QITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSS 189
+ +P + + +L+ + K + +++ + K + + TY+ +++ F +SG
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKR-GLVANAVTYSILVQGFCQSGKIKL 421
Query: 190 VYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMME--EKYGMSPALSTYNV 247
+ EM + V P+ +T+ ++G K E K L++ E +K M + Y
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE---KALEIFEDLQKSKMDLGIVMYTT 478
Query: 248 RILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRG 307
I +CK + +A L + G KPN ++++ +I G C +G+L EA + M++ G
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Query: 308 YKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSK 362
P Y TL GD ++ ++ +E G+ + +++K ++ L+ K
Sbjct: 539 NAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK 593
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 9/209 (4%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKK----FEE 224
P + ++ + A + + V +++ N + N T + I F K +
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 225 VGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLI 284
+GKV+K+ G P +T+N I L + SEA L+ M+ G +P+ V+++ ++
Sbjct: 146 LGKVMKL-----GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIV 200
Query: 285 HGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWV 344
+G C G+ A + M++R K + Y T+ LC G ++A + KE KG
Sbjct: 201 NGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 260
Query: 345 PNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
+ T LV GL K +D L+K +
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDM 289
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 89/190 (46%), Gaps = 1/190 (0%)
Query: 192 SILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILS 251
++ EM R+ P+ V FS K+F V K +E G++ + T N+ I
Sbjct: 74 ALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELN-GIAHNIYTLNIMINC 132
Query: 252 LCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPE 311
C+ +T A ++L ++ G +P+ +F+ LI G EG + EA + M + G +P+
Sbjct: 133 FCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPD 192
Query: 312 SPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIK 371
Y ++ + +C GD A ++ ++ ++ + T ++ L D A L K
Sbjct: 193 VVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFK 252
Query: 372 QVKEKFTESS 381
+++ K +SS
Sbjct: 253 EMETKGIKSS 262
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 107/208 (51%), Gaps = 1/208 (0%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
PD TY ++I G T+ ++ +E ++PN + ++ I+G ++ E ++
Sbjct: 354 PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQL 413
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
M EK G+ P + T+N+ + LCK+ S+A L++ MIS G P+ +F+ LIHGY
Sbjct: 414 ANEMSEK-GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYS 472
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
+ ++ A ++ M G P+ Y +L + LC+ FE E K ++KG PN
Sbjct: 473 TQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLF 532
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQVKEK 376
T L+ L K D+A L++++K K
Sbjct: 533 TFNILLESLCRYRKLDEALGLLEEMKNK 560
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 148/325 (45%), Gaps = 11/325 (3%)
Query: 36 LLKSETNPERILDICRAASLTPDFHLDRIALSVAISKLKDGNHFSTIDQFLRDLPTSRPD 95
++K + +P + L++ + F I KL F +++ L D+ + +
Sbjct: 13 VIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGN 72
Query: 96 LRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVS 155
E ++ YG+ + AV F RM D + P+V S NA++ + + + +
Sbjct: 73 HMLEGVYVGAMKNYGRKGKVQEAVNVFERM-DFYDCEPTVFSYNAIMSVLVDSGYFDQAH 131
Query: 156 RIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEG 215
++Y+ ++ I PDV ++ +KSF ++ + +L+ M N V + + G
Sbjct: 132 KVYMRM-RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGG 190
Query: 216 FYSE----KKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISG 271
FY E + +E GK+L G+S LST+N + LCK E + LL +I
Sbjct: 191 FYEENFKAEGYELFGKMLAS-----GVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKR 245
Query: 272 GRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESA 331
G PN +++ I G C G LD A ++ + ++G KP+ Y L + LC+ F+ A
Sbjct: 246 GVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA 305
Query: 332 FEITKESMDKGWVPNFTTMKKLVTG 356
+ +++G P+ T L+ G
Sbjct: 306 EVYLGKMVNEGLEPDSYTYNTLIAG 330
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
PD+ T+N +I ++ + IL M N V P+ T+++ + G KFE+V +
Sbjct: 459 PDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMET 518
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
K M EK G +P L T+N+ + SLC+ ++ EA LL+ M + P+ V+F LI G+C
Sbjct: 519 YKTMVEK-GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFC 577
Query: 289 WEGNLDEA------------------------------------KKVFADMKKRGYKPES 312
G+LD A +K+F +M R P+
Sbjct: 578 KNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDG 637
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQ 372
Y + C+ G+ ++ E M+ G++P+ TT+ +++ L + +A +I +
Sbjct: 638 YTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHR 697
Query: 373 VKEK 376
+ +K
Sbjct: 698 MVQK 701
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 108/247 (43%), Gaps = 4/247 (1%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
++ + + N LL D KE ++ LD + P++ TYN I+ + G
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKL-LDKVIKRGVLPNLFTYNLFIQGLCQRGELDGA 270
Query: 191 YSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL-KMMEEKYGMSPALSTYNVRI 249
++ + +P+ +T++N I G KF+E L KM+ E G+ P TYN I
Sbjct: 271 VRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNE--GLEPDSYTYNTLI 328
Query: 250 LSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYK 309
CK A+ ++ + G P+ ++ LI G C EG + A +F + +G K
Sbjct: 329 AGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388
Query: 310 PESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKEL 369
P Y TL L G A ++ E +KG +P T LV GL + DA L
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448
Query: 370 IKQVKEK 376
+K + K
Sbjct: 449 VKVMISK 455
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 108/243 (44%), Gaps = 4/243 (1%)
Query: 105 SIVLYGQARMLP--NAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFP 162
+I+++G + L NA+ M D + P V + N+LL +++V Y
Sbjct: 465 NILIHGYSTQLKMENALEILDVMLDN-GVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMV 523
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
+ P++ T+N +++S +L EM SV P+AVTF I+GF
Sbjct: 524 EK-GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDL 582
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
+ + + MEE Y +S + TYN+ I + + + A+ L Q M+ P+ ++
Sbjct: 583 DGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRL 642
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
++ G+C GN++ K +M + G+ P + + LC A I + KG
Sbjct: 643 MVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKG 702
Query: 343 WVP 345
VP
Sbjct: 703 LVP 705
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 93/216 (43%), Gaps = 1/216 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
I+P+V YNT+IK + G + +EM + P TF+ + G +
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
++K+M K G P + T+N+ I + A +L M+ G P+ +++ L++
Sbjct: 446 DGLVKVMISK-GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLN 504
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
G C ++ + + M ++G P + L LC + A + +E +K P
Sbjct: 505 GLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP 564
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTESS 381
+ T L+ G D A L ++++E + SS
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSS 600
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 108/259 (41%), Gaps = 1/259 (0%)
Query: 118 AVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTV 177
A+ F MR E ++ + +++ ++ + + +D +N Y
Sbjct: 23 ALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGA 82
Query: 178 IKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYG 237
+K++ G ++ MD P +++ + F++ KV M ++ G
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDR-G 141
Query: 238 MSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAK 297
++P + ++ +R+ S CK R A LL M S G + N V++ ++ G+ E E
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201
Query: 298 KVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGL 357
++F M G + L LC+ GD + ++ + + +G +PN T + GL
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 358 VGVSKTDDAKELIKQVKEK 376
+ D A ++ + E+
Sbjct: 262 CQRGELDGAVRMVGCLIEQ 280
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 7/187 (3%)
Query: 94 PDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKE 153
P+L L +S+ Y R L A+ M+++ + P + L+ D
Sbjct: 529 PNLFTFNILLESLCRY---RKLDEALGLLEEMKNK-SVNPDAVTFGTLIDGFCKNGDLDG 584
Query: 154 VSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAI 213
++ + Y + TYN +I +F E + + + EM + P+ T+ +
Sbjct: 585 AYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644
Query: 214 EGFYSEKKFEEVGK-VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGG 272
+GF K +L+MME G P+L+T I LC R EA ++ M+ G
Sbjct: 645 DGFCKTGNVNLGYKFLLEMMEN--GFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKG 702
Query: 273 RKPNWVS 279
P V+
Sbjct: 703 LVPEAVN 709
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 120/257 (46%), Gaps = 3/257 (1%)
Query: 113 RMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVE 172
R + +A+ FT M D I P V + ++L+ + + SR+ D + I P+V
Sbjct: 254 RHVDDALNLFTEM-DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER-KINPNVV 311
Query: 173 TYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMM 232
T+N++I +FA+ G + EM + S+ PN VT+++ I GF + +E ++ +M
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371
Query: 233 EEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGN 292
K + P + TYN I CK K+ + L + M G N V+++ LIHG+ +
Sbjct: 372 VSKDCL-PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430
Query: 293 LDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKK 352
D A+ VF M G P Y TL LC+ G E A + + P+ T
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490
Query: 353 LVTGLVGVSKTDDAKEL 369
+ G+ K +D +L
Sbjct: 491 MSEGMCKAGKVEDGWDL 507
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 3/208 (1%)
Query: 167 IQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVG 226
I+ DV Y+TVI S + ++ +EMD +RP+ T+S+ I + ++ +
Sbjct: 236 IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 295
Query: 227 KVLK-MMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
++L M+E K ++P + T+N I + K + EA+ L MI PN V+++ LI+
Sbjct: 296 RLLSDMLERK--INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN 353
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
G+C LDEA+++F M + P+ Y TL + C+ E+ ++ +G V
Sbjct: 354 GFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVG 413
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIKQV 373
N T L+ G S D+A+ + KQ+
Sbjct: 414 NTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 1/209 (0%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
QPD+ TY VI + G ++L++M++ + + V +S I+ + ++
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALN 261
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
+ M+ K G+ P + TY+ I LC R S+A LL M+ PN V+F+ LI +
Sbjct: 262 LFTEMDNK-GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAF 320
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
EG L EA+K+F +M +R P Y +L + C + A +I + K +P+
Sbjct: 321 AKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 380
Query: 348 TTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
T L+ G K D EL + + +
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDMSRR 409
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 132/314 (42%), Gaps = 35/314 (11%)
Query: 93 RPDLRNERFLSQSIVLYGQ----ARML---------PNAVTAFTRMRDEF---------- 129
RPD+ L + YG+ +R+L PN VT F + D F
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT-FNSLIDAFAKEGKLIEAE 330
Query: 130 ---------QITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKS 180
I P++ + N+L+ + E +I+ + PDV TYNT+I
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF-TLMVSKDCLPDVVTYNTLING 389
Query: 181 FAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSP 240
F ++ + +M R + N VT++ I GF+ + V K M G+ P
Sbjct: 390 FCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD-GVHP 448
Query: 241 ALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVF 300
+ TYN + LCK + +A + + + +P+ +++ + G C G +++ +F
Sbjct: 449 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLF 508
Query: 301 ADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGV 360
+ +G KP+ Y T+ C+ G E A+ + + + G +P+ T L+ +
Sbjct: 509 CSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRD 568
Query: 361 SKTDDAKELIKQVK 374
+ ELIK+++
Sbjct: 569 GDKAASAELIKEMR 582
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 1/208 (0%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P + T N+++ F S +++ +M +P+ VTF+ + G + K E +
Sbjct: 133 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 192
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
++ M K G P L TY I LCK A LL M G + + V +S +I C
Sbjct: 193 VERMVVK-GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLC 251
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
++D+A +F +M +G +P+ Y +L LC G + A + + +++ PN
Sbjct: 252 KYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVV 311
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQVKEK 376
T L+ K +A++L ++ ++
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 1/211 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
+ ++ TYN +I S +IL +M + P+ VT ++ + GF + E
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
++ M E G P T+ + L + + SEA AL++ M+ G +P+ V++ +I+
Sbjct: 155 VALVDQMVE-MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 213
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
G C G D A + M+K + + Y T+ LC+ + A + E +KG P
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+ T L++ L + DA L+ + E+
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLER 304
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 93/188 (49%), Gaps = 1/188 (0%)
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
+ EM ++ P+ V FS + KKF+ V + ME G+S L TYN+ I L
Sbjct: 52 LFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKME-ILGVSHNLYTYNIMINCL 110
Query: 253 CKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPES 312
C+ + S A A+L M+ G P+ V+ + L++G+C + EA + M + GY+P++
Sbjct: 111 CRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDT 170
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQ 372
+ TL H L + A + + + KG P+ T ++ GL + D A L+ +
Sbjct: 171 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK 230
Query: 373 VKEKFTES 380
+++ E+
Sbjct: 231 MEKGKIEA 238
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 70/160 (43%), Gaps = 1/160 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
+ P++ TYNT++ ++G + + ++ + P+ T++ EG K E+
Sbjct: 445 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDG 504
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
+ + K G+ P + YN I CK EA L M G P+ +++ LI
Sbjct: 505 WDLFCSLSLK-GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIR 563
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEG 325
+ +G+ + ++ +M+ + ++ Y + L +G
Sbjct: 564 AHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDG 603
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 116/241 (48%), Gaps = 2/241 (0%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
P + ++N L+ ++ E + + +D Y QP+ TY V+ +SG T+
Sbjct: 191 PDLITINTLVNGLCLSGKEAE-AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
+L +M+ +++ +AV +S I+G + + ME K G++ + TYN+ I
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK-GITTNIITYNILIGGF 308
Query: 253 CKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPES 312
C R + LL+ MI PN V+FS LI + EG L EA+++ +M RG P++
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQ 372
Y +L C+ + A ++ + KG PN T L+ G ++ DD EL ++
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Query: 373 V 373
+
Sbjct: 429 M 429
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 106/214 (49%), Gaps = 1/214 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
I ++ TYN +I F +G +L +M + + PN VTFS I+ F E K E
Sbjct: 293 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 352
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
++ K M + G++P TY I CK +A ++ M+S G PN +F+ LI+
Sbjct: 353 EELHKEMIHR-GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
GYC +D+ ++F M RG ++ Y TL CE G A E+ +E + + P
Sbjct: 412 GYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP 471
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTE 379
N T K L+ GL +++ A E+ +++++ E
Sbjct: 472 NIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 505
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 135/317 (42%), Gaps = 41/317 (12%)
Query: 105 SIVLYGQARM--LPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFP 162
SI++ G + L NA F M + IT ++ + N L+ A + + +++ D
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMK-GITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
K I P+V T++ +I SF + G + EM + P+ +T+++ I+GF E
Sbjct: 326 KR-KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 384
Query: 223 EEVGKVLKMMEEKYGMSPALST-----------------------------------YNV 247
++ +++ +M K G P + T YN
Sbjct: 385 DKANQMVDLMVSK-GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 248 RILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRG 307
I C+L + + AK L Q M+S PN V++ L+ G C G ++A ++F ++K
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 308 YKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAK 367
+ + Y + H +C + A+++ KG P T ++ GL +A+
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Query: 368 ELIKQVKEKFTESSDKW 384
L ++++E + D W
Sbjct: 564 LLFRKMEED-GHAPDGW 579
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 1/208 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
I ++ T + +I F +S + ++ + PN +TFS I G E + E
Sbjct: 118 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 177
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
+++ M E G P L T N + LC + +EA L+ M+ G +PN V++ +++
Sbjct: 178 LELVDRMVE-MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 236
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
C G A ++ M++R K ++ Y + LC+ G ++AF + E KG
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT 296
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIKQV 373
N T L+ G + DD +L++ +
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDM 324
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 1/203 (0%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
+PD+ T NT++ SG + ++ +M +PNAVT+ + + +
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
+L+ MEE+ A+ Y++ I LCK A L M G N ++++ LI G+
Sbjct: 250 LLRKMEERNIKLDAVK-YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
C G D+ K+ DM KR P + L + G A E+ KE + +G P+
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 348 TTMKKLVTGLVGVSKTDDAKELI 370
T L+ G + D A +++
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMV 391
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 16/229 (6%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRI--YLDFPKNYSIQ---PDVETYNTVIKSFAESGST 187
P++++ N L+ Y + +RI L+ + S++ D TYNT+I+ F E G
Sbjct: 401 PNIRTFNILI------NGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454
Query: 188 SSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMME--EKYGMSPALSTY 245
+ + EM V PN VT+ ++G + E K L++ E EK M + Y
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESE---KALEIFEKIEKSKMELDIGIY 511
Query: 246 NVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKK 305
N+ I +C + +A L + G KP +++ +I G C +G L EA+ +F M++
Sbjct: 512 NIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEE 571
Query: 306 RGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
G+ P+ Y L GD + ++ +E G+ + +T+K ++
Sbjct: 572 DGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 620
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 88/173 (50%), Gaps = 1/173 (0%)
Query: 204 PNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKA 263
P + FS K+++ V + K ME K G++ L T ++ I C+ ++ A +
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELK-GIAHNLYTLSIMINCFCRCRKLCLAFS 144
Query: 264 LLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLC 323
+ +I G +PN ++FS LI+G C EG + EA ++ M + G+KP+ TL + LC
Sbjct: 145 AMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLC 204
Query: 324 EGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
G A + + ++ G PN T ++ + +T A EL+++++E+
Sbjct: 205 LSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 96/212 (45%), Gaps = 9/212 (4%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKK----FEE 224
P V ++ + + A++ V ++ +M+ + N T S I F +K F
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 225 VGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLI 284
+GK++K+ G P T++ I LC R SEA L+ M+ G KP+ ++ + L+
Sbjct: 146 MGKIIKL-----GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLV 200
Query: 285 HGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWV 344
+G C G EA + M + G +P + Y + + +C+ G A E+ ++ ++
Sbjct: 201 NGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIK 260
Query: 345 PNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+ ++ GL D+A L +++ K
Sbjct: 261 LDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK 292
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 103/203 (50%), Gaps = 1/203 (0%)
Query: 164 NYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFE 223
N I+P+V TYN++I+ G S +LS+M + PN VTFS I+ F E K
Sbjct: 283 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 342
Query: 224 EVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHL 283
E K+ M ++ + P + TY+ I C R EAK + + MIS PN V+++ L
Sbjct: 343 EAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401
Query: 284 IHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGW 343
I G+C ++E ++F +M +RG + Y TL L + GD + A +I K+ + G
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Query: 344 VPNFTTMKKLVTGLVGVSKTDDA 366
P+ T L+ GL K + A
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKA 484
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 122/269 (45%), Gaps = 5/269 (1%)
Query: 109 YGQARMLPNAVTAFTRM-RDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSI 167
Y + + AV +M E+Q P+ + N L+ + E + +D
Sbjct: 160 YCHGKRISEAVALVDQMFVMEYQ--PNTVTFNTLIHGLFLHNKASEAVAL-IDRMVARGC 216
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
QPD+ TY TV+ + G S+L +M++ + + V ++ I+ + K +
Sbjct: 217 QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALN 276
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
+ M+ K G+ P + TYN I LC R S+A LL MI PN V+FS LI +
Sbjct: 277 LFTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 335
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
EG L EA+K++ +M KR P+ Y +L + C + A + + + K PN
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 395
Query: 348 TTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
T L+ G + ++ EL +++ ++
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQR 424
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 116/253 (45%), Gaps = 3/253 (1%)
Query: 117 NAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNT 176
+A+ FT M D I P+V + N+L+ + + SR+ D + I P+V T++
Sbjct: 273 DALNLFTEM-DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFSA 330
Query: 177 VIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKY 236
+I +F + G + EM + S+ P+ T+S+ I GF + +E + ++M K
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK- 389
Query: 237 GMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEA 296
P + TYN I CK KR E L + M G N V+++ LI G G+ D A
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 297 KKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTG 356
+K+F M G P+ Y L LC+ G E A + + P+ T ++ G
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 509
Query: 357 LVGVSKTDDAKEL 369
+ K +D +L
Sbjct: 510 MCKAGKVEDGWDL 522
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 136/290 (46%), Gaps = 14/290 (4%)
Query: 93 RPDLRNERFLSQSIVLYGQ----ARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIA 148
RP++ L + + YG+ +R+L + + E +I P+V + +AL+ A +
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMI--------ERKINPNVVTFSALIDAFVKE 338
Query: 149 KDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVT 208
E ++Y + K SI PD+ TY+++I F + M PN VT
Sbjct: 339 GKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 397
Query: 209 FSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGM 268
++ I+GF K+ EE ++ + M ++ G+ TYN I L + A+ + + M
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQR-GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Query: 269 ISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDF 328
+S G P+ +++S L+ G C G L++A VF ++K +P+ Y + +C+ G
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 516
Query: 329 ESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFT 378
E +++ KG PN +++G ++A L +++KE T
Sbjct: 517 EDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 111/225 (49%), Gaps = 2/225 (0%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
P+V + N L+ AK +E ++ + + + V TYNT+I+ ++G
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV-TYNTLIQGLFQAGDCDMAQK 451
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
I +M + V P+ +T+S ++G K E+ V + ++ K M P + TYN+ I +
Sbjct: 452 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ-KSKMEPDIYTYNIMIEGM 510
Query: 253 CKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPES 312
CK + + L + G KPN + ++ +I G+C +G +EA +F +MK+ G P S
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNS 570
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGL 357
Y TL GD ++ E+ KE G+V + +T+ ++ L
Sbjct: 571 GTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 98/206 (47%), Gaps = 1/206 (0%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P+V TYNT+IK F ++ + EM + + N VT++ I+G + + K+
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
K M G+ P + TY++ + LCK + +A + + + +P+ +++ +I G C
Sbjct: 453 FKKMVSD-GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMC 511
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
G +++ +F + +G KP Y T+ C G E A + +E + G +PN
Sbjct: 512 KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSG 571
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQVK 374
T L+ + + ELIK+++
Sbjct: 572 TYNTLIRARLRDGDKAASAELIKEMR 597
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 106/233 (45%), Gaps = 15/233 (6%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
+PD+ T ++++ + S +++ +M +PN VTF+ I G + K E
Sbjct: 147 EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVA 206
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
++ M + G P L TY + LCK A +LL+ M G + + V ++ +I
Sbjct: 207 LIDRMVAR-GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 265
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
C N+++A +F +M +G +P Y +L LC G + A + + +++ PN
Sbjct: 266 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325
Query: 348 TTMKKLVTGLVGVSKTDDAKELIKQVKEK------FTESS--------DKWDE 386
T L+ V K +A++L ++ ++ FT SS D+ DE
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 107/264 (40%), Gaps = 42/264 (15%)
Query: 115 LPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYL-DFPKNYSIQPDVET 173
L +AV F M + PS+ N LL A IAK K I L + +N I D+ +
Sbjct: 61 LDDAVDLFGEMVQSRPL-PSIVEFNKLLSA--IAKMNKFDLVISLGERMQNLRISYDLYS 117
Query: 174 YNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMME 233
YN +I F ++L +M + P+ VT S+ + G+
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGY----------------- 160
Query: 234 EKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNL 293
C KR SEA AL+ M +PN V+F+ LIHG
Sbjct: 161 -------------------CHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKA 201
Query: 294 DEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWV-PNFTTMKK 352
EA + M RG +P+ Y T+ + LC+ GD + A + K+ M+KG + +
Sbjct: 202 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK-MEKGKIEADVVIYTT 260
Query: 353 LVTGLVGVSKTDDAKELIKQVKEK 376
++ L +DA L ++ K
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNK 284
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 131/267 (49%), Gaps = 4/267 (1%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
Y + M+ +AV M +++P+ ++ N L+ + +K + L+ +
Sbjct: 403 YCKRGMIEDAVDVVELMESR-KLSPNTRTYNELIKGYCKSNVHKAMG--VLNKMLERKVL 459
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
PDV TYN++I SG+ S Y +LS M+ + P+ T+++ I+ K+ EE +
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
+E+K G++P + Y I CK + EA +L+ M+S PN ++F+ LIHG C
Sbjct: 520 FDSLEQK-GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
+G L EA + M K G +P L H L + GDF+ A+ ++ + G P+
Sbjct: 579 ADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAH 638
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQVKE 375
T + + DA++++ +++E
Sbjct: 639 TYTTFIQTYCREGRLLDAEDMMAKMRE 665
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 116/243 (47%), Gaps = 3/243 (1%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
+ P+V + NAL+ + E + ++ ++ + P+ TYN +IK + +S +
Sbjct: 389 LMPNVITYNALI-NGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKA 446
Query: 191 YSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRIL 250
+L++M V P+ VT+++ I+G F+ ++L +M ++ G+ P TY I
Sbjct: 447 MGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDR-GLVPDQWTYTSMID 505
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
SLCK KR EA L + G PN V ++ LI GYC G +DEA + M + P
Sbjct: 506 SLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLP 565
Query: 311 ESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELI 370
S + L H LC G + A + ++ + G P +T L+ L+ D A
Sbjct: 566 NSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRF 625
Query: 371 KQV 373
+Q+
Sbjct: 626 QQM 628
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 91/206 (44%), Gaps = 1/206 (0%)
Query: 171 VETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLK 230
+ YNT++ S A G + + EM + V PN T++ + G+ EE + +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 231 MMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWE 290
+ E G+ P TY I+ C+ K A + M G + N V+++HLIHG C
Sbjct: 243 KIVEA-GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVA 301
Query: 291 GNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTM 350
+DEA +F MK P Y L LC A + KE + G PN T
Sbjct: 302 RRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTY 361
Query: 351 KKLVTGLVGVSKTDDAKELIKQVKEK 376
L+ L K + A+EL+ Q+ EK
Sbjct: 362 TVLIDSLCSQCKFEKARELLGQMLEK 387
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 124/269 (46%), Gaps = 11/269 (4%)
Query: 97 RNERFLSQSIVLYGQARMLPNAVTAFTRMRD---------EFQITPSVKSLNALLFAALI 147
++ERF + ++ G L N++ F + + E ++ P++ + N ++
Sbjct: 171 KDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCK 230
Query: 148 AKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAV 207
+ +E ++ Y+ + PD TY ++I + + S + + +EM R N V
Sbjct: 231 LGNVEEANQ-YVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEV 289
Query: 208 TFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQG 267
+++ I G ++ +E + M++ P + TY V I SLC +R SEA L++
Sbjct: 290 AYTHLIHGLCVARRIDEAMDLFVKMKDDECF-PTVRTYTVLIKSLCGSERKSEALNLVKE 348
Query: 268 MISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGD 327
M G KPN +++ LI C + ++A+++ M ++G P Y L + C+ G
Sbjct: 349 MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408
Query: 328 FESAFEITKESMDKGWVPNFTTMKKLVTG 356
E A ++ + + PN T +L+ G
Sbjct: 409 IEDAVDVVELMESRKLSPNTRTYNELIKG 437
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 7/196 (3%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
+ P+V Y +I + ++G + +L +M + PN++TF+ I G ++ K +E
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Query: 226 GKVLKMMEEKY---GMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
++EEK G+ P +ST + I L K A + Q M+S G KP+ +++
Sbjct: 587 ----TLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTT 642
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
I YC EG L +A+ + A M++ G P+ Y +L + G AF++ K D G
Sbjct: 643 FIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702
Query: 343 WVPNFTTMKKLVTGLV 358
P+ T L+ L+
Sbjct: 703 CEPSQHTFLSLIKHLL 718
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 120/286 (41%), Gaps = 34/286 (11%)
Query: 73 LKDGNHFSTIDQFLRDLPT-SRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQI 131
LKDG+ +F + L + ++PD Q+ Y + L +A +MR E +
Sbjct: 613 LKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQT---YCREGRLLDAEDMMAKMR-ENGV 668
Query: 132 TPSVKSLNALLFAALIAKDYKEVSRIYLDFP-----KNYSIQPDVETYNTVIKSFAE--- 183
+P + + ++L+ K Y ++ + F ++ +P T+ ++IK E
Sbjct: 669 SPDLFTYSSLI------KGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKY 722
Query: 184 ---SGST------------SSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
GS +V +L +M +SV PNA ++ I G KV
Sbjct: 723 GKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKV 782
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
M+ G+SP+ +N + CKLK+ +EA ++ MI G P S LI G
Sbjct: 783 FDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLY 842
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEI 334
+G + VF ++ + GY + + + + + G E+ +E+
Sbjct: 843 KKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYEL 888
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 1/207 (0%)
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL 229
+V +N ++K + S+L EM RNS+ P+ +++ I GF K+ E+ ++
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 230 KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW 289
M+ G S +L T+ + I + CK + EA L+ M G + + V ++ LI G+C
Sbjct: 201 NEMKGS-GCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCD 259
Query: 290 EGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTT 349
G LD K +F ++ +RG P + Y TL C+ G + A EI + +++G PN T
Sbjct: 260 CGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYT 319
Query: 350 MKKLVTGLVGVSKTDDAKELIKQVKEK 376
L+ GL GV KT +A +L+ + EK
Sbjct: 320 YTGLIDGLCGVGKTKEALQLLNLMIEK 346
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 1/213 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
S+ PDV +YNTVI+ F E + +EM + + VT+ I+ F K +E
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
LK M+ G+ L Y I C KAL ++ G P ++++ LI
Sbjct: 232 MGFLKEMK-FMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIR 290
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
G+C G L EA ++F M +RG +P Y L LC G + A ++ ++K P
Sbjct: 291 GFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEP 350
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFT 378
N T ++ L DA E+++ +K++ T
Sbjct: 351 NAVTYNIIINKLCKDGLVADAVEIVELMKKRRT 383
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 104/219 (47%), Gaps = 4/219 (1%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P TYNT+I+ F + G I M VRPN T++ I+G K +E ++
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
L +M EK P TYN+ I LCK ++A +++ M +P+ ++++ L+ G C
Sbjct: 340 LNLMIEK-DEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398
Query: 289 WEGNLDEAKKVFADM-KKRGY-KPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPN 346
+G+LDEA K+ M K Y P+ Y L H LC+ A +I ++K +
Sbjct: 399 AKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGD 458
Query: 347 FTTMKKLVTGLVGVSKTDDAKELIKQVKE-KFTESSDKW 384
T L+ + + A EL KQ+ + K +SD +
Sbjct: 459 RVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTY 497
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 119/270 (44%), Gaps = 5/270 (1%)
Query: 103 SQSIVLYGQARMLP--NAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLD 160
+ +I+L G R L AV+ MR + P V S N ++ K+ ++ + +
Sbjct: 144 NHNILLKGLCRNLECGKAVSLLREMRRN-SLMPDVFSYNTVIRGFCEGKELEKALELANE 202
Query: 161 FPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEK 220
K + T+ +I +F ++G L EM + + V +++ I GF
Sbjct: 203 M-KGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261
Query: 221 KFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSF 280
+ + GK L + G SP TYN I CKL + EA + + MI G +PN ++
Sbjct: 262 ELDR-GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320
Query: 281 SHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMD 340
+ LI G C G EA ++ M ++ +P + Y + + LC+ G A EI +
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380
Query: 341 KGWVPNFTTMKKLVTGLVGVSKTDDAKELI 370
+ P+ T L+ GL D+A +L+
Sbjct: 381 RRTRPDNITYNILLGGLCAKGDLDEASKLL 410
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 107/255 (41%), Gaps = 2/255 (0%)
Query: 122 FTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSF 181
+ ++D P V S NAL+ + IY D D T N ++ S
Sbjct: 411 YLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIY-DLLVEKLGAGDRVTTNILLNST 469
Query: 182 AESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPA 241
++G + + ++ + + N+ T++ I+GF + V K L + P+
Sbjct: 470 LKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGF-CKTGMLNVAKGLLCKMRVSELQPS 528
Query: 242 LSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFA 301
+ YN + SLCK +A L + M P+ VSF+ +I G G++ A+ +
Sbjct: 529 VFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLV 588
Query: 302 DMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVS 361
M + G P+ Y L + + G + A + +D G+ P+ ++ +
Sbjct: 589 GMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQG 648
Query: 362 KTDDAKELIKQVKEK 376
+TD EL+K++ +K
Sbjct: 649 ETDKLTELVKKLVDK 663
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 96/239 (40%), Gaps = 36/239 (15%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
+P+ TYN +I + G + I+ M + RP+ +T++ + G ++ +E K
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASK 408
Query: 228 VLK-MMEEKYGMSPALSTYNVRILSLCKLKRTSEA----KALLQGMISGGRKP------- 275
+L M+++ P + +YN I LCK R +A L++ + +G R
Sbjct: 409 LLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNS 468
Query: 276 ------------------------NWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPE 311
N +++ +I G+C G L+ AK + M+ +P
Sbjct: 469 TLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPS 528
Query: 312 SPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELI 370
Y L LC+ G + A+ + +E P+ + ++ G + A+ L+
Sbjct: 529 VFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 82/202 (40%), Gaps = 1/202 (0%)
Query: 175 NTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE 234
N ++ S + +S +M N V+ S +E + +K VL +M
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALML- 134
Query: 235 KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLD 294
K G + + +N+ + LC+ +A +LL+ M P+ S++ +I G+C L+
Sbjct: 135 KRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELE 194
Query: 295 EAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
+A ++ +MK G + L C+ G + A KE G + L+
Sbjct: 195 KALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLI 254
Query: 355 TGLVGVSKTDDAKELIKQVKEK 376
G + D K L +V E+
Sbjct: 255 RGFCDCGELDRGKALFDEVLER 276
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 127/285 (44%), Gaps = 4/285 (1%)
Query: 93 RPDLRNERFLSQSIV-LYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDY 151
R L+ ++ SI+ L + L A AF+ M + I P L+ D
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ-GILPDTVVYTTLIDGFCKRGDI 367
Query: 152 KEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSN 211
+ S+ + + + I PDV TY +I F + G + EM + P++VTF+
Sbjct: 368 RAASKFFYEM-HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 212 AIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISG 271
I G+ ++ +V M + G SP + TY I LCK A LL M
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 272 GRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESA 331
G +PN +++ +++G C GN++EA K+ + + G ++ Y TL C+ G+ + A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 332 FEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
EI KE + KG P T L+ G +D ++L+ + K
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 125/266 (46%), Gaps = 19/266 (7%)
Query: 111 QARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPD 170
QA PN VT +T + D + S N LL E+ +I +QP+
Sbjct: 449 QAGCSPNVVT-YTTLIDGLCKEGDLDSANELL---------HEMWKI--------GLQPN 490
Query: 171 VETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLK 230
+ TYN+++ +SG+ ++ E + + + VT++ ++ + + ++ ++LK
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 231 MMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWE 290
M K G+ P + T+NV + C + + LL M++ G PN +F+ L+ YC
Sbjct: 551 EMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 291 GNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTM 350
NL A ++ DM RG P+ Y L C+ + + A+ + +E KG+ + +T
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Query: 351 KKLVTGLVGVSKTDDAKELIKQVKEK 376
L+ G + K +A+E+ Q++ +
Sbjct: 670 SVLIKGFLKRKKFLEAREVFDQMRRE 695
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 127/266 (47%), Gaps = 11/266 (4%)
Query: 104 QSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKD-YKEVSRI--YLD 160
Q +V +G +L A F +M + + + SV S N L ++KD YK + I + +
Sbjct: 183 QVLVDFG---LLREARRVFEKMLN-YGLVLSVDSCNVYL--TRLSKDCYKTATAIIVFRE 236
Query: 161 FPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEK 220
FP+ + +V +YN VI + G + +L M+ P+ +++S + G+
Sbjct: 237 FPE-VGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 295
Query: 221 KFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSF 280
+ ++V K++++M+ K G+ P Y I LC++ + +EA+ MI G P+ V +
Sbjct: 296 ELDKVWKLIEVMKRK-GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVY 354
Query: 281 SHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMD 340
+ LI G+C G++ A K F +M R P+ Y + C+ GD A ++ E
Sbjct: 355 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414
Query: 341 KGWVPNFTTMKKLVTGLVGVSKTDDA 366
KG P+ T +L+ G DA
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDA 440
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 99/212 (46%), Gaps = 2/212 (0%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
+ P++ + N+++ + + +E ++ +F + D TY T++ ++ +SG
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA-GLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 191 YSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRIL 250
IL EM ++P VTF+ + GF E+ K+L M K G++P +T+N +
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK-GIAPNATTFNSLVK 604
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
C A A+ + M S G P+ ++ +L+ G+C N+ EA +F +MK +G+
Sbjct: 605 QYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSV 664
Query: 311 ESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
Y L + F A E+ + +G
Sbjct: 665 SVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 94/211 (44%), Gaps = 2/211 (0%)
Query: 164 NYSIQPDVETYNTVIKSFA-ESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
NY + V++ N + + + T++ + E V N +++ I +
Sbjct: 203 NYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRI 262
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
+E +L +ME K G +P + +Y+ + C+ + L++ M G KPN +
Sbjct: 263 KEAHHLLLLMELK-GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGS 321
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
+I C L EA++ F++M ++G P++ Y TL C+ GD +A + E +
Sbjct: 322 IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 381
Query: 343 WVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
P+ T +++G + +A +L ++
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 127/285 (44%), Gaps = 4/285 (1%)
Query: 93 RPDLRNERFLSQSIV-LYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDY 151
R L+ ++ SI+ L + L A AF+ M + I P L+ D
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ-GILPDTVVYTTLIDGFCKRGDI 367
Query: 152 KEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSN 211
+ S+ + + + I PDV TY +I F + G + EM + P++VTF+
Sbjct: 368 RAASKFFYEM-HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 212 AIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISG 271
I G+ ++ +V M + G SP + TY I LCK A LL M
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 272 GRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESA 331
G +PN +++ +++G C GN++EA K+ + + G ++ Y TL C+ G+ + A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 332 FEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
EI KE + KG P T L+ G +D ++L+ + K
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 125/266 (46%), Gaps = 19/266 (7%)
Query: 111 QARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPD 170
QA PN VT +T + D + S N LL E+ +I +QP+
Sbjct: 449 QAGCSPNVVT-YTTLIDGLCKEGDLDSANELL---------HEMWKI--------GLQPN 490
Query: 171 VETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLK 230
+ TYN+++ +SG+ ++ E + + + VT++ ++ + + ++ ++LK
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 231 MMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWE 290
M K G+ P + T+NV + C + + LL M++ G PN +F+ L+ YC
Sbjct: 551 EMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 291 GNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTM 350
NL A ++ DM RG P+ Y L C+ + + A+ + +E KG+ + +T
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Query: 351 KKLVTGLVGVSKTDDAKELIKQVKEK 376
L+ G + K +A+E+ Q++ +
Sbjct: 670 SVLIKGFLKRKKFLEAREVFDQMRRE 695
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 127/266 (47%), Gaps = 11/266 (4%)
Query: 104 QSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKD-YKEVSRI--YLD 160
Q +V +G +L A F +M + + + SV S N L ++KD YK + I + +
Sbjct: 183 QVLVDFG---LLREARRVFEKMLN-YGLVLSVDSCNVYL--TRLSKDCYKTATAIIVFRE 236
Query: 161 FPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEK 220
FP+ + +V +YN VI + G + +L M+ P+ +++S + G+
Sbjct: 237 FPE-VGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 295
Query: 221 KFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSF 280
+ ++V K++++M+ K G+ P Y I LC++ + +EA+ MI G P+ V +
Sbjct: 296 ELDKVWKLIEVMKRK-GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVY 354
Query: 281 SHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMD 340
+ LI G+C G++ A K F +M R P+ Y + C+ GD A ++ E
Sbjct: 355 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414
Query: 341 KGWVPNFTTMKKLVTGLVGVSKTDDA 366
KG P+ T +L+ G DA
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDA 440
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 99/212 (46%), Gaps = 2/212 (0%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
+ P++ + N+++ + + +E ++ +F + D TY T++ ++ +SG
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA-GLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 191 YSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRIL 250
IL EM ++P VTF+ + GF E+ K+L M K G++P +T+N +
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK-GIAPNATTFNSLVK 604
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
C A A+ + M S G P+ ++ +L+ G+C N+ EA +F +MK +G+
Sbjct: 605 QYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSV 664
Query: 311 ESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
Y L + F A E+ + +G
Sbjct: 665 SVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 94/211 (44%), Gaps = 2/211 (0%)
Query: 164 NYSIQPDVETYNTVIKSFA-ESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
NY + V++ N + + + T++ + E V N +++ I +
Sbjct: 203 NYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRI 262
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
+E +L +ME K G +P + +Y+ + C+ + L++ M G KPN +
Sbjct: 263 KEAHHLLLLMELK-GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGS 321
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
+I C L EA++ F++M ++G P++ Y TL C+ GD +A + E +
Sbjct: 322 IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 381
Query: 343 WVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
P+ T +++G + +A +L ++
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 127/254 (50%), Gaps = 5/254 (1%)
Query: 124 RMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSI---QPDVETYNTVIKS 180
+MR+E + P + + N+ + A + SRI+ D + + +P+ TYN ++K
Sbjct: 242 KMREE-GLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKG 300
Query: 181 FAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSP 240
F + G ++ + N + +++ ++G KF E VLK M +K G+ P
Sbjct: 301 FCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDK-GIGP 359
Query: 241 ALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVF 300
++ +YN+ + LCKL S+AK ++ M G P+ V++ L+HGYC G +D AK +
Sbjct: 360 SIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLL 419
Query: 301 ADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGV 360
+M + P + L H L + G A E+ ++ +KG+ + T +V GL G
Sbjct: 420 QEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGS 479
Query: 361 SKTDDAKELIKQVK 374
+ D A E++K ++
Sbjct: 480 GELDKAIEIVKGMR 493
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 129/297 (43%), Gaps = 31/297 (10%)
Query: 104 QSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPK 163
Q +V +G+ A T +M D+ I PS+ S N +L L ++ + K
Sbjct: 334 QGLVRHGK---FIEAETVLKQMTDK-GIGPSIYSYN-ILMDGLCKLGMLSDAKTIVGLMK 388
Query: 164 NYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFE 223
+ PD TY ++ + G + S+L EM RN+ PNA T + + + +
Sbjct: 389 RNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRIS 448
Query: 224 EVGKVLKMMEEK-YGMSPALSTYNVRILSLCKLKRTSEAKALLQGM-------------- 268
E ++L+ M EK YG+ T N+ + LC +A +++GM
Sbjct: 449 EAEELLRKMNEKGYGLDTV--TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNS 506
Query: 269 ---------ISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLA 319
I P+ +++S L++G C G EAK +FA+M +P+S Y
Sbjct: 507 YIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFI 566
Query: 320 HFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
H C+ G SAF + K+ KG + T L+ GL ++ + L+ ++KEK
Sbjct: 567 HHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK 623
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 110/215 (51%), Gaps = 5/215 (2%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSV----RPNAVTFSNAIEGFYSEKK 221
+ PD+ T+N+ I + + G I S+M+ + RPN++T++ ++GF
Sbjct: 247 GLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGL 306
Query: 222 FEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFS 281
E+ + + + E ++ +L +YN+ + L + + EA+ +L+ M G P+ S++
Sbjct: 307 LEDAKTLFESIRENDDLA-SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYN 365
Query: 282 HLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDK 341
L+ G C G L +AK + MK+ G P++ Y L H C G ++A + +E M
Sbjct: 366 ILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRN 425
Query: 342 GWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+PN T L+ L + + +A+EL++++ EK
Sbjct: 426 NCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEK 460
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 129/279 (46%), Gaps = 13/279 (4%)
Query: 106 IVLYGQARMLPNAVTAFTRMRDEF-QITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKN 164
+ ++ ++ + A F +R F + PSV N LL + + + + VS +Y D
Sbjct: 82 VSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVL- 140
Query: 165 YSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEE 224
I P T+N +I++ +S + + EM +PN TF + G Y + +
Sbjct: 141 CGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRG-YCKAGLTD 199
Query: 225 VGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLI 284
G L E +G+ P YN + S C+ R +++ +++ M G P+ V+F+ I
Sbjct: 200 KGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRI 259
Query: 285 HGYCWEGNLDEAKKVFADMKKRGY----KPESPCYFTLAHFLCEGGDFESA---FEITKE 337
C EG + +A ++F+DM+ Y +P S Y + C+ G E A FE +E
Sbjct: 260 SALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRE 319
Query: 338 SMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+ D + ++ + GLV K +A+ ++KQ+ +K
Sbjct: 320 NDDLASLQSYNIW---LQGLVRHGKFIEAETVLKQMTDK 355
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 118/282 (41%), Gaps = 36/282 (12%)
Query: 128 EFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGST 187
E P + + + LL A + E ++ + +QPD YN I F + G
Sbjct: 517 ENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEM-MGEKLQPDSVAYNIFIHHFCKQGKI 575
Query: 188 SSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNV 247
SS + +L +M++ + T+++ I G + + E+ ++ M+EK G+SP + TYN
Sbjct: 576 SSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK-GISPNICTYNT 634
Query: 248 RILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFAD----- 302
I LC+ ++ +A LL M+ PN SF +LI +C + D A++VF
Sbjct: 635 AIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSIC 694
Query: 303 -----------------------------MKKRGYKPESPCYFTLAHFLCEGGDFESAFE 333
+ RG++ + Y L LC+ + E A
Sbjct: 695 GQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASG 754
Query: 334 ITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
I + +D+G+ + + ++ GL + +A ++ E
Sbjct: 755 ILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMME 796
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 131/268 (48%), Gaps = 3/268 (1%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
+G+ M+ + + +M+ E I P++ + N L+ + A R++ + ++ I+
Sbjct: 197 FGKLGMVEELLWVWRKMK-ENGIEPTLYTYNFLMNGLVSAMFVDSAERVF-EVMESGRIK 254
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
PD+ TYNT+IK + ++G T L +M+ + +T+ I+ Y++ F +
Sbjct: 255 PDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVAL 314
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
+ M+EK G+ +++ I LCK + +E + + MI G KPN ++ LI GY
Sbjct: 315 YQEMDEK-GIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYA 373
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
G++++A ++ M G+KP+ Y + + LC+ G E A + G N
Sbjct: 374 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSM 433
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQVKEK 376
L+ GL + D+A+ L +++ EK
Sbjct: 434 FYSSLIDGLGKAGRVDEAERLFEEMSEK 461
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 98/245 (40%), Gaps = 39/245 (15%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
IQ ++ VI + G + Y++ M R +PN ++ I+G+ E+
Sbjct: 322 GIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDA 381
Query: 226 GKVL-KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLI 284
++L +M++E G P + TY+V + LCK R EA G N + +S LI
Sbjct: 382 IRLLHRMIDE--GFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLI 439
Query: 285 HGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLC------------------EGG 326
G G +DEA+++F +M ++G +S CY L EG
Sbjct: 440 DGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGC 499
Query: 327 D------------------FESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKE 368
D E A ++ +DKG P + L TGL K A +
Sbjct: 500 DQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACK 559
Query: 369 LIKQV 373
++ ++
Sbjct: 560 ILDEL 564
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 106/262 (40%), Gaps = 3/262 (1%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
Y ++ + +A+ RM DE P V + + ++ L E + Y + +
Sbjct: 372 YAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVV-NGLCKNGRVEEALDYFHTCRFDGLA 429
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
+ Y+++I ++G + EM ++ ++ I+ F +K +E +
Sbjct: 430 INSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIAL 489
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
K MEE+ G + TY + + + K R EA L MI G P F L G C
Sbjct: 490 FKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLC 549
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
G + A K+ ++ G ++ C + + LC+ G + A ++ ++G
Sbjct: 550 LSGKVARACKILDELAPMGVILDAACE-DMINTLCKAGRIKEACKLADGITERGREVPGR 608
Query: 349 TMKKLVTGLVGVSKTDDAKELI 370
++ L V K D A +L+
Sbjct: 609 IRTVMINALRKVGKADLAMKLM 630
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 2/217 (0%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
+PD+ YN +I S ++ + + E++R +RPN VT++ + G + ++ + +
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
+L M +K ++P + TY+ + + K + EAK L + M+ P+ V++S LI+G
Sbjct: 247 LLSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
C +DEA ++F M +G + Y TL + C+ E ++ +E +G V N
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 348 TTMKKLVTGLVGVSKTDDAKELIKQVKEKFTESSDKW 384
T L+ G D A+E Q+ + F S D W
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQM-DFFGISPDIW 401
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 116/239 (48%), Gaps = 2/239 (0%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
I P+V + AL+ + + + +R+ D K I P+V TY+ ++ +F ++G
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK-KITPNVITYSALLDAFVKNGKVLEA 279
Query: 191 YSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRIL 250
+ EM R S+ P+ VT+S+ I G + +E ++ +M K ++ +S YN I
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS-YNTLIN 338
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
CK KR + L + M G N V+++ LI G+ G++D+A++ F+ M G P
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Query: 311 ESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKEL 369
+ Y L LC+ G+ E A I ++ + + T ++ G+ K ++A L
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 109/238 (45%), Gaps = 4/238 (1%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
PS+ N LL A + K Y V + + I+ D+ T+N VI F S S
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKM-EVLGIRNDLYTFNIVINCFCCCFQVSLALS 141
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEE-VGKVLKMMEEKYGMSPALSTYNVRILS 251
IL +M + P+ VT + + GF + + V V KM+E G P + YN I S
Sbjct: 142 ILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE--IGYKPDIVAYNAIIDS 199
Query: 252 LCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPE 311
LCK KR ++A + + G +PN V+++ L++G C +A ++ +DM K+ P
Sbjct: 200 LCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPN 259
Query: 312 SPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKEL 369
Y L + G A E+ +E + P+ T L+ GL + D+A ++
Sbjct: 260 VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 317
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 113/243 (46%), Gaps = 3/243 (1%)
Query: 115 LPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETY 174
+ +AV+ +M E P + + NA++ + K + + + + I+P+V TY
Sbjct: 171 VSDAVSLVDKMV-EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK-GIRPNVVTY 228
Query: 175 NTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE 234
++ S S +LS+M + + PN +T+S ++ F K E ++ + M
Sbjct: 229 TALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV- 287
Query: 235 KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLD 294
+ + P + TY+ I LC R EA + M+S G + VS++ LI+G+C ++
Sbjct: 288 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 347
Query: 295 EAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
+ K+F +M +RG + Y TL + GD + A E + G P+ T L+
Sbjct: 348 DGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Query: 355 TGL 357
GL
Sbjct: 408 GGL 410
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 91/187 (48%), Gaps = 2/187 (1%)
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
+ S+M ++ P+ V F+ + KK++ V + K ME G+ L T+N+ I
Sbjct: 72 LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEV-LGIRNDLYTFNIVINCF 130
Query: 253 CKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPES 312
C + S A ++L M+ G +P+ V+ L++G+C + +A + M + GYKP+
Sbjct: 131 CCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDI 190
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIK- 371
Y + LC+ AF+ KE KG PN T LV GL S+ DA L+
Sbjct: 191 VAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSD 250
Query: 372 QVKEKFT 378
+K+K T
Sbjct: 251 MIKKKIT 257
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 101/220 (45%), Gaps = 2/220 (0%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
I P + + ++L+ + E ++++ D + DV +YNT+I F ++
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMF-DLMVSKGCLADVVSYNTLINGFCKAKRVEDG 349
Query: 191 YSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRIL 250
+ EM + + N VT++ I+GF+ ++ + M+ +G+SP + TYN+ +
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF-FGISPDIWTYNILLG 408
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
LC +A + + M + V+++ +I G C G ++EA +F + +G KP
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Query: 311 ESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTM 350
+ Y T+ LC G + + +G + N T+
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 162/341 (47%), Gaps = 17/341 (4%)
Query: 41 TNPERILDICRAASLTPDFHLDRIALSVAI-SKLKDGNHFSTIDQFLRDLPTS---RPDL 96
+ + ++D R PD I+ + I ++LK G + L D+ + RPD
Sbjct: 242 SKAQELVDAMRQRGCVPDL----ISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDA 297
Query: 97 RNERFLSQSIVLYGQAR--MLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEV 154
++ + +L +R L AV F M + + P + + NA++ E
Sbjct: 298 -----ITYNTLLSACSRDSNLDGAVKVFEDM-EAHRCQPDLWTYNAMISVYGRCGLAAEA 351
Query: 155 SRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIE 214
R++++ PD TYN+++ +FA +T V + +M + + +T++ I
Sbjct: 352 ERLFMELELK-GFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIH 410
Query: 215 GFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRK 274
+ + + + ++ K M+ G +P TY V I SL K RT EA AL+ M+ G K
Sbjct: 411 MYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIK 470
Query: 275 PNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEI 334
P ++S LI GY G +EA+ F+ M + G KP++ Y + L G + A+ +
Sbjct: 471 PTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGL 530
Query: 335 TKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
++ + G P++T + ++ GL+ +++DD ++ I+ ++E
Sbjct: 531 YRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEE 571
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 136/300 (45%), Gaps = 8/300 (2%)
Query: 80 STIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLN 139
+ + +RD P+ P + + L ++ + G+ L V M F+I+ S S+
Sbjct: 808 AIFNTMMRDGPS--PTVESINILLHALCVDGRLEELYVVVEELQDM--GFKISKS--SIL 861
Query: 140 ALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDR 199
+L A A + EV +IY K P + Y +I+ + ++SEM+
Sbjct: 862 LMLDAFARAGNIFEVKKIYSSM-KAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEE 920
Query: 200 NSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTS 259
+ + +++ ++ + + + +++ +V + ++E G+ P +TYN I+ C+ +R
Sbjct: 921 ANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKET-GLEPDETTYNTLIIMYCRDRRPE 979
Query: 260 EAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLA 319
E L+Q M + G P ++ LI + + L++A+++F ++ +G K + Y T+
Sbjct: 980 EGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMM 1039
Query: 320 HFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTE 379
+ G A ++ + + G P TM L+ +A++++ +K+ E
Sbjct: 1040 KISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVE 1099
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 10/212 (4%)
Query: 139 NALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMD 198
N++L +DYK+ ++Y K ++PD TYNT+I + Y ++ +M
Sbjct: 931 NSMLKMYTAIEDYKKTVQVYQRI-KETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMR 989
Query: 199 RNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRT 258
+ P T+ + I F +K E+ ++ + + K G+ S Y+ ++ K+ R
Sbjct: 990 NLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSK-GLKLDRSFYH----TMMKISRD 1044
Query: 259 S----EAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPC 314
S +A+ LLQ M + G +P + L+ Y GN EA+KV +++K + +
Sbjct: 1045 SGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLP 1104
Query: 315 YFTLAHFLCEGGDFESAFEITKESMDKGWVPN 346
Y ++ D+ S E E +G P+
Sbjct: 1105 YSSVIDAYLRSKDYNSGIERLLEMKKEGLEPD 1136
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 90/203 (44%), Gaps = 6/203 (2%)
Query: 174 YNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMME 233
Y +I+++ + S++ + ++ P+ T+++ + + +E + M
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 234 EKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNL 293
+ G SP + + N+ + +LC R E +++ + G K + S ++ + GN+
Sbjct: 815 -RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNI 873
Query: 294 DEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMD----KGWVPNFTT 349
E KK+++ MK GY P Y + LC+G A EI M+ K + + +
Sbjct: 874 FEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDA-EIMVSEMEEANFKVELAIWNS 932
Query: 350 MKKLVTGLVGVSKTDDAKELIKQ 372
M K+ T + KT + IK+
Sbjct: 933 MLKMYTAIEDYKKTVQVYQRIKE 955
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/321 (17%), Positives = 129/321 (40%), Gaps = 24/321 (7%)
Query: 66 LSVAISKLKDGNHFSTID--QFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFT 123
LS+ S G H + +FL++ + L E IVL+ + L A+
Sbjct: 613 LSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEAL----IVLHCKVNNLSAAL---- 664
Query: 124 RMRDEFQITPSVKS--------LNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYN 175
DE+ P V LL + + Y E S+++ D + +
Sbjct: 665 ---DEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDL-RLSGCEASESVCK 720
Query: 176 TVIKSFAESGSTSSVYSILSEMDRNSVR-PNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE 234
+++ + + G + + ++++ + + +++ IE + +K +++ V+ + +
Sbjct: 721 SMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQ 780
Query: 235 KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLD 294
G +P L T+N + + + A+A+ M+ G P S + L+H C +G L+
Sbjct: 781 S-GRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLE 839
Query: 295 EAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
E V +++ G+K + G+ +I G++P + ++
Sbjct: 840 ELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMI 899
Query: 355 TGLVGVSKTDDAKELIKQVKE 375
L + DA+ ++ +++E
Sbjct: 900 ELLCKGKRVRDAEIMVSEMEE 920
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 121/268 (45%), Gaps = 3/268 (1%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
Y ++ + +AV +M E P + L+ + E + +D Q
Sbjct: 163 YCHSKRISDAVALVDQMV-EMGYKPDTFTFTTLIHGLFLHNKASEAVAL-VDQMVQRGCQ 220
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
PD+ TY TV+ + G ++L++M+ ++ N V F+ I+ + E +
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDL 280
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
ME K G+ P + TYN I LC R S+A LL M+ PN V+F+ LI +
Sbjct: 281 FTEMETK-GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFF 339
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
EG L EA+K+ +M +R P++ Y L + C + A ++ K + K +PN
Sbjct: 340 KEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ 399
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQVKEK 376
T L+ G + +D EL +++ ++
Sbjct: 400 TYNTLINGFCKCKRVEDGVELFREMSQR 427
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 1/210 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
I+P+V TYN++I G S +LS M + PN VTF+ I+ F+ E K E
Sbjct: 288 GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA 347
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
K+ + M ++ + P TYN+ I C R EAK + + M+S PN +++ LI+
Sbjct: 348 EKLHEEMIQR-SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLIN 406
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
G+C +++ ++F +M +RG + Y T+ + GD +SA + K+ +
Sbjct: 407 GFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPT 466
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
+ T L+ GL K D A + K +++
Sbjct: 467 DIMTYSILLHGLCSYGKLDTALVIFKYLQK 496
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 103/207 (49%), Gaps = 1/207 (0%)
Query: 167 IQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVG 226
I+ +V +NT+I S + + +EM+ +RPN VT+++ I + ++ +
Sbjct: 254 IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDAS 313
Query: 227 KVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHG 286
++L M EK ++P + T+N I + K + EA+ L + MI P+ ++++ LI+G
Sbjct: 314 RLLSNMLEK-KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLING 372
Query: 287 YCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPN 346
+C LDEAK++F M + P Y TL + C+ E E+ +E +G V N
Sbjct: 373 FCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGN 432
Query: 347 FTTMKKLVTGLVGVSKTDDAKELIKQV 373
T ++ G D A+ + KQ+
Sbjct: 433 TVTYTTIIQGFFQAGDCDSAQMVFKQM 459
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 115/257 (44%), Gaps = 3/257 (1%)
Query: 113 RMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVE 172
R + AV FT M + I P+V + N+L+ + + SR+ + + I P+V
Sbjct: 272 RHVEVAVDLFTEMETK-GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK-KINPNVV 329
Query: 173 TYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMM 232
T+N +I +F + G + EM + S+ P+ +T++ I GF + +E ++ K M
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389
Query: 233 EEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGN 292
K + P + TYN I CK KR + L + M G N V+++ +I G+ G+
Sbjct: 390 VSKDCL-PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448
Query: 293 LDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKK 352
D A+ VF M + Y L H LC G ++A I K N
Sbjct: 449 CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNT 508
Query: 353 LVTGLVGVSKTDDAKEL 369
++ G+ K +A +L
Sbjct: 509 MIEGMCKAGKVGEAWDL 525
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 108/232 (46%), Gaps = 6/232 (2%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
P++++ N L+ K ++ ++ + + + V TY T+I+ F ++G S
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV-TYTTIIQGFFQAGDCDSAQM 454
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
+ +M N V + +T+S + G S K + + K ++ K M + YN I +
Sbjct: 455 VFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ-KSEMELNIFIYNTMIEGM 513
Query: 253 CKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPES 312
CK + EA L S KP+ V+++ +I G C + L EA +F MK+ G P S
Sbjct: 514 CKAGKVGEAWDLF---CSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNS 570
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTD 364
Y TL D ++ E+ KE G+V + +T+ LVT ++ + D
Sbjct: 571 GTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTI-SLVTNMLHDGRLD 621
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 88/182 (48%), Gaps = 1/182 (0%)
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
+ +M ++ P+ V F+ + KFE V + + M+ G+S L TY++ I
Sbjct: 70 LFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQ-TLGISHDLYTYSIFINCF 128
Query: 253 CKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPES 312
C+ + S A A+L M+ G +P+ V+ S L++GYC + +A + M + GYKP++
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQ 372
+ TL H L A + + + +G P+ T +V GL D A L+ +
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNK 248
Query: 373 VK 374
++
Sbjct: 249 ME 250
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 96/244 (39%), Gaps = 38/244 (15%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P + +N ++ + A+ V S+ +M + + T+S I F + V
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 229 L-KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
L KMM K G P + T + + C KR S+A AL+ M+ G KP+ +F+ LIHG
Sbjct: 141 LAKMM--KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDF------------------- 328
EA + M +RG +P+ Y T+ + LC+ GD
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANV 258
Query: 329 ----------------ESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQ 372
E A ++ E KG PN T L+ L + DA L+
Sbjct: 259 VIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSN 318
Query: 373 VKEK 376
+ EK
Sbjct: 319 MLEK 322
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 109/242 (45%), Gaps = 8/242 (3%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
+ V + N LL + + + +R+ D K SI PDV T+ +I F + G+
Sbjct: 207 LGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKR-SINPDVVTFTALIDVFVKQGNLDEA 265
Query: 191 YSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRIL 250
+ EM ++SV PN VT+++ I G + + K +M K G P + TYN I
Sbjct: 266 QELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK-GCFPNVVTYNTLIS 324
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
CK + E L Q M G + +++ LIHGYC G L A +F M R P
Sbjct: 325 GFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTP 384
Query: 311 ESPCYFTLAHFLCEGGDFESA---FEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAK 367
+ + L H LC G+ ESA F+ +ES + + M + GL K + A
Sbjct: 385 DIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIM---IHGLCKADKVEKAW 441
Query: 368 EL 369
EL
Sbjct: 442 EL 443
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 1/206 (0%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
+P + T+ +++ F +S++ M ++ PN V ++ I+G + +
Sbjct: 138 EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALE 197
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
+L ME+K G+ + TYN + LC R S+A +L+ M+ P+ V+F+ LI +
Sbjct: 198 LLNEMEKK-GLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVF 256
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
+GNLDEA++++ +M + P + Y ++ + LC G A + KG PN
Sbjct: 257 VKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNV 316
Query: 348 TTMKKLVTGLVGVSKTDDAKELIKQV 373
T L++G D+ +L +++
Sbjct: 317 VTYNTLISGFCKFRMVDEGMKLFQRM 342
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 105/240 (43%), Gaps = 4/240 (1%)
Query: 130 QITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKN-YSIQPDVETYNTVIKSFAESGSTS 188
Q PS+ LL A + Y+ V IY Y I D+ ++ +I F S
Sbjct: 66 QPLPSIVDFTRLLTATANLRRYETV--IYFSQKMELYGISHDLYSFTILIHCFCRCSRLS 123
Query: 189 SVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVR 248
S+L +M + P+ VTF + + GF + + ++ +M K G P + YN
Sbjct: 124 FALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV-KSGYEPNVVVYNTL 182
Query: 249 ILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGY 308
I LCK + A LL M G + V+++ L+ G C+ G +A ++ DM KR
Sbjct: 183 IDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSI 242
Query: 309 KPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKE 368
P+ + L + G+ + A E+ KE + PN T ++ GL + DAK+
Sbjct: 243 NPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKK 302
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 1/197 (0%)
Query: 180 SFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMS 239
F S +++ EM + P+ V F+ + + +++E V + ME YG+S
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKME-LYGIS 103
Query: 240 PALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKV 299
L ++ + I C+ R S A ++L M+ G +P+ V+F L+HG+C + +A +
Sbjct: 104 HDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSL 163
Query: 300 FADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVG 359
M K GY+P Y TL LC+ G+ A E+ E KG + T L+TGL
Sbjct: 164 VILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223
Query: 360 VSKTDDAKELIKQVKEK 376
+ DA +++ + ++
Sbjct: 224 SGRWSDAARMLRDMMKR 240
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 3/206 (1%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P + + ++ + A +V +M+ + + +F+ I F + V
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 229 L-KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
L KMM K G P++ T+ + C + R +A +L+ M+ G +PN V ++ LI G
Sbjct: 129 LGKMM--KLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGL 186
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
C G L+ A ++ +M+K+G + Y TL LC G + A + ++ M + P+
Sbjct: 187 CKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDV 246
Query: 348 TTMKKLVTGLVGVSKTDDAKELIKQV 373
T L+ V D+A+EL K++
Sbjct: 247 VTFTALIDVFVKQGNLDEAQELYKEM 272
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 102/257 (39%), Gaps = 39/257 (15%)
Query: 125 MRDEFQ--ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFA 182
+RD + I P V + AL+ + + E +Y + ++ S+ P+ TYN++I
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS-SVDPNNVTYNSIINGLC 292
Query: 183 ESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPAL 242
G M PN VT++ I GF + +E K+ + M + G + +
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE-GFNADI 351
Query: 243 STYNVRILSLCKLKRTSEA-------------------KALLQGMISGG----------- 272
TYN I C++ + A LL G+ G
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDD 411
Query: 273 -----RKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGD 327
+ V+++ +IHG C +++A ++F + G KP++ Y + LC+ G
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGP 471
Query: 328 FESAFEITKESMDKGWV 344
A E+ + ++G +
Sbjct: 472 RREADELIRRMKEEGII 488
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 104/214 (48%), Gaps = 1/214 (0%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P++ TYN V+ + G T + + EM V N VT++ I G E K E KV
Sbjct: 266 PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKV 325
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
+ M+ G++P L TYN I C + + +A +L + + S G P+ V+++ L+ G+C
Sbjct: 326 VDQMKSD-GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFC 384
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
+G+ A K+ +M++RG KP Y L + E A ++ + G VP+
Sbjct: 385 RKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVH 444
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQVKEKFTESSD 382
T L+ G + ++A L K + EK E ++
Sbjct: 445 TYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNE 478
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 127/258 (49%), Gaps = 9/258 (3%)
Query: 124 RMRDEFQITPSVK----SLNALLFAALIAKDYKEV----SRIYLDFPKNYSIQPDVETYN 175
R +D FQ+ ++ S N + + LI +E+ + +D K+ I P++ TYN
Sbjct: 283 RTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYN 342
Query: 176 TVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEK 235
T+I F G S+ ++ + P+ VT++ + GF + K++K MEE+
Sbjct: 343 TLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEER 402
Query: 236 YGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDE 295
G+ P+ TY + I + + +A L M G P+ ++S LIHG+C +G ++E
Sbjct: 403 -GIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 296 AKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVT 355
A ++F M ++ +P Y T+ C+ G A ++ KE +K PN + + ++
Sbjct: 462 ASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIE 521
Query: 356 GLVGVSKTDDAKELIKQV 373
L K+ +A+ L++++
Sbjct: 522 VLCKERKSKEAERLVEKM 539
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 141/332 (42%), Gaps = 42/332 (12%)
Query: 80 STIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLN 139
S++ +L + TS+ R + S Y Q++ L +++ F M D P N
Sbjct: 78 SSLLHYLTESETSKTKFRLYEVIINS---YVQSQSLNLSISYFNEMVDN-GFVPGSNCFN 133
Query: 140 ALLFAALIAKDYKEVSRIYLDFPKNYS-IQPDVETYNTVIKSFAESGSTSSVYSILSEMD 198
LL + + + ++ + F +N S + DV ++ +IK E+G + +L E+
Sbjct: 134 YLLTFVVGSSSF---NQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELT 190
Query: 199 RNSVRPNAVTFSNAIEGFYSEKKFE-------EVGKV----------------------- 228
PN V ++ I+G + + E E+GK+
Sbjct: 191 EFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKK 250
Query: 229 --LKMME--EKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLI 284
+M E ++ G+ P L TYN + LCK RT +A + M G N V+++ LI
Sbjct: 251 QGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLI 310
Query: 285 HGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWV 344
G C E L+EA KV MK G P Y TL C G A + ++ +G
Sbjct: 311 GGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLS 370
Query: 345 PNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
P+ T LV+G T A +++K+++E+
Sbjct: 371 PSLVTYNILVSGFCRKGDTSGAAKMVKEMEER 402
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 104/213 (48%), Gaps = 5/213 (2%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
+ ++ TYNT+I + ++ +M + + PN +T++ I+GF K +
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK---L 354
Query: 226 GKVLKMMEE--KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHL 283
GK L + + G+SP+L TYN+ + C+ TS A +++ M G KP+ V+++ L
Sbjct: 355 GKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTIL 414
Query: 284 IHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGW 343
I + N+++A ++ M++ G P+ Y L H C G A + K ++K
Sbjct: 415 IDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNC 474
Query: 344 VPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
PN ++ G + A +L+K+++EK
Sbjct: 475 EPNEVIYNTMILGYCKEGSSYRALKLLKEMEEK 507
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 128/268 (47%), Gaps = 11/268 (4%)
Query: 95 DLRNERFLSQSIVLY-----GQAR--MLPNAVTAFTRMRDEFQITPSVKSLNALLFAALI 147
D ER +S +IV Y G R L A +M+ + I P++ + N L+
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD-GINPNLITYNTLIDGFCG 350
Query: 148 AKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAV 207
+ + D K+ + P + TYN ++ F G TS ++ EM+ ++P+ V
Sbjct: 351 VGKLGKALSLCRDL-KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKV 409
Query: 208 TFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQG 267
T++ I+ F E+ + L++ E+ G+ P + TY+V I C + +EA L +
Sbjct: 410 TYTILIDTFARSDNMEKAIQ-LRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468
Query: 268 MISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGD 327
M+ +PN V ++ +I GYC EG+ A K+ +M+++ P Y + LC+
Sbjct: 469 MVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERK 528
Query: 328 FESAFEITKESMDKGWVPNFTTMKKLVT 355
+ A + ++ +D G P+ T++ L++
Sbjct: 529 SKEAERLVEKMIDSGIDPS-TSILSLIS 555
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 162/410 (39%), Gaps = 44/410 (10%)
Query: 12 YSTILSPNSST-----PLTAKEKSRTA--LHLLKSETNPERILDICRAASLTPDFHLDRI 64
+S L+P SST P +A S L L+S+ + L + AS P+F +
Sbjct: 25 FSLNLTPPSSTISFASPHSAALSSTDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPA 84
Query: 65 ALSVAISKLKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTR 124
+ +L F + + L D+ +SR ++ FL I Y Q + ++
Sbjct: 85 LYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLIL-IESYAQFELQDEILSVVDW 143
Query: 125 MRDEFQ-----------------------------------ITPSVKSLNALLFAALIAK 149
M DEF I P V + N L+ A A
Sbjct: 144 MIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAH 203
Query: 150 DYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTF 209
+ + D P +Y + PD +T+ TV++ + E G I +M + V+
Sbjct: 204 QLRPAILMLEDMP-SYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSV 262
Query: 210 SNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMI 269
+ + GF E + E+ ++ M + G P T+N + LCK A ++ M+
Sbjct: 263 NVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVML 322
Query: 270 SGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFE 329
G P+ +++ +I G C G + EA +V M R P + Y TL LC+ E
Sbjct: 323 QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVE 382
Query: 330 SAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTE 379
A E+ + KG +P+ T L+ GL A EL ++++ K E
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCE 432
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 123/257 (47%), Gaps = 2/257 (0%)
Query: 120 TAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIK 179
T R+ I P V + N+L+ + ++++ ++ + ++ +PD TYN +I
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM-RSKGCEPDEFTYNMLID 443
Query: 180 SFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMS 239
S G ++L +M+ + + +T++ I+GF K E ++ ME +G+S
Sbjct: 444 SLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME-VHGVS 502
Query: 240 PALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKV 299
TYN I LCK +R +A L+ MI G+KP+ +++ L+ +C G++ +A +
Sbjct: 503 RNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADI 562
Query: 300 FADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVG 359
M G +P+ Y TL LC+ G E A ++ + KG ++ GL
Sbjct: 563 VQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFR 622
Query: 360 VSKTDDAKELIKQVKEK 376
KT +A L +++ E+
Sbjct: 623 KRKTTEAINLFREMLEQ 639
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 5/220 (2%)
Query: 159 LDFPKNYSIQ----PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIE 214
L+F + S Q PD T+NT++ ++G I+ M + P+ T+++ I
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVIS 338
Query: 215 GFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRK 274
G + +E +VL M + SP TYN I +LCK + EA L + + S G
Sbjct: 339 GLCKLGEVKEAVEVLDQMITR-DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 397
Query: 275 PNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEI 334
P+ +F+ LI G C N A ++F +M+ +G +P+ Y L LC G + A +
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457
Query: 335 TKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVK 374
K+ G + T L+ G +KT +A+E+ +++
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 114/260 (43%), Gaps = 43/260 (16%)
Query: 171 VETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLK 230
V TYNT+I F ++ T I EM+ + V N+VT++ I+G ++ E+ +++
Sbjct: 470 VITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD 529
Query: 231 MMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWE 290
M + G P TYN + C+ +A ++Q M S G +P+ V++ LI G C
Sbjct: 530 QMIME-GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Query: 291 GNLDEAKKVFADMKKRGYK------------------------------------PESPC 314
G ++ A K+ ++ +G P++
Sbjct: 589 GRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVS 648
Query: 315 YFTLAHFLCEGGD-FESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
Y + LC GG A + E ++KG+VP F+++ L GL+ +S + +L+ V
Sbjct: 649 YRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMV 708
Query: 374 KEKFTESSDKWDEIEAELIK 393
+K ++ E E ++K
Sbjct: 709 MQK-----ARFSEEEVSMVK 723
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 136/296 (45%), Gaps = 10/296 (3%)
Query: 82 IDQFLRD-LPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNA 140
+D+ ++D PT+ R + I G+A + AV F + + F P S NA
Sbjct: 172 VDEMVQDGFPTT------ARTFNLLICSCGEAGLAKQAVVQFMKSK-TFNYRPFKHSYNA 224
Query: 141 LLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRN 200
+L + L K YK + +Y ++ PDV TYN ++ + G + EM R+
Sbjct: 225 ILNSLLGVKQYKLIEWVYKQMLED-GFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARD 283
Query: 201 SVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSE 260
P++ T++ + K L M+E G+ P++ Y I L +
Sbjct: 284 GFSPDSYTYNILLHILGKGNKPLAALTTLNHMKE-VGIDPSVLHYTTLIDGLSRAGNLEA 342
Query: 261 AKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAH 320
K L M+ G +P+ V ++ +I GY G LD+AK++F +M +G P Y ++
Sbjct: 343 CKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 402
Query: 321 FLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
LC G+F A + KE +G PNF LV+ L K +A+++I+++ +K
Sbjct: 403 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKK 458
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 9/211 (4%)
Query: 102 LSQSIVLYGQARMLPNAVTAFTRMRDEFQ---ITPSVKSLNALLFAALIAKDYKEVSRIY 158
L+ +I+L+ R+ + F R+ DE +P + N LL ++ K K ++ +
Sbjct: 255 LTYNILLWTNYRL--GKMDRFDRLFDEMARDGFSPDSYTYNILL--HILGKGNKPLAALT 310
Query: 159 -LDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFY 217
L+ K I P V Y T+I + +G+ + L EM + RP+ V ++ I G+
Sbjct: 311 TLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYV 370
Query: 218 SEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNW 277
+ ++ ++ + M K G P + TYN I LC EA LL+ M S G PN+
Sbjct: 371 VSGELDKAKEMFREMTVK-GQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNF 429
Query: 278 VSFSHLIHGYCWEGNLDEAKKVFADMKKRGY 308
V +S L+ G L EA+KV +M K+G+
Sbjct: 430 VVYSTLVSYLRKAGKLSEARKVIREMVKKGH 460
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 107/264 (40%), Gaps = 36/264 (13%)
Query: 148 AKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAV 207
A+ K R +L + + V +Y+ ++K FAE G +++ ++ EM ++ A
Sbjct: 126 ARCAKLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTAR 185
Query: 208 TFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQG 267
TF N + E + V M + + P +YN + SL +K+ + + +
Sbjct: 186 TF-NLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQ 244
Query: 268 MISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEG-- 325
M+ G P+ ++++ L+ G +D ++F +M + G+ P+S Y L H L +G
Sbjct: 245 MLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNK 304
Query: 326 ---------------------------------GDFESAFEITKESMDKGWVPNFTTMKK 352
G+ E+ E + G P+
Sbjct: 305 PLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTV 364
Query: 353 LVTGLVGVSKTDDAKELIKQVKEK 376
++TG V + D AKE+ +++ K
Sbjct: 365 MITGYVVSGELDKAKEMFREMTVK 388
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 122/270 (45%), Gaps = 12/270 (4%)
Query: 105 SIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSL----NALLFAALI----AKDYKEVSR 156
SIV +G L N R + + + L N +++ +I K +
Sbjct: 148 SIVTFGS---LVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTAL 204
Query: 157 IYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGF 216
L K I+PDV TYN++I SG+ ILS+M R + P+ +TFS I+ +
Sbjct: 205 DVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVY 264
Query: 217 YSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPN 276
E + E K M ++ ++P + TYN I LC EAK +L ++S G PN
Sbjct: 265 GKEGQLLEAKKQYNEMIQR-SVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPN 323
Query: 277 WVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITK 336
V+++ LI+GYC +D+ K+ M + G ++ Y TL C+ G F +A ++
Sbjct: 324 AVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLG 383
Query: 337 ESMDKGWVPNFTTMKKLVTGLVGVSKTDDA 366
+ G P+ T L+ GL K A
Sbjct: 384 RMVSCGVHPDMYTFNILLDGLCDHGKIGKA 413
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 101/236 (42%), Gaps = 2/236 (0%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
I P V + N+L+ + + +RI D + I PDV T++ +I + + G
Sbjct: 215 IRPDVVTYNSLITRLFHSGTWGVSARILSDMMR-MGISPDVITFSALIDVYGKEGQLLEA 273
Query: 191 YSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRIL 250
+EM + SV PN VT+++ I G +E KVL ++ K G P TYN I
Sbjct: 274 KKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSK-GFFPNAVTYNTLIN 332
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
CK KR + +L M G + +++ L GYC G A+KV M G P
Sbjct: 333 GYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHP 392
Query: 311 ESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDA 366
+ + L LC+ G A ++ V T ++ GL K +DA
Sbjct: 393 DMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDA 448
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 120/289 (41%), Gaps = 38/289 (13%)
Query: 117 NAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNT 176
+A+T F M + + PS+ + LL A Y+ V ++ + I D+ ++ T
Sbjct: 62 DALTLFCDMAESHPL-PSIVDFSRLLIAIAKLNKYEAVISLFRHL-EMLGISHDLYSFTT 119
Query: 177 VIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEE--------VG-- 226
+I F S S L +M + P+ VTF + + GF +F E VG
Sbjct: 120 LIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLG 179
Query: 227 -------------------------KVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEA 261
VLK M+ K G+ P + TYN I L +
Sbjct: 180 YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMK-KMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 262 KALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHF 321
+L M+ G P+ ++FS LI Y EG L EAKK + +M +R P Y +L +
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 322 LCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELI 370
LC G + A ++ + KG+ PN T L+ G + DD +++
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKIL 347
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 82/184 (44%), Gaps = 1/184 (0%)
Query: 174 YNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMME 233
Y ++S S + ++ +M + P+ V FS + K+E V + + +E
Sbjct: 47 YRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLE 106
Query: 234 EKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNL 293
G+S L ++ I C+ R S A + L M+ G +P+ V+F L++G+C
Sbjct: 107 -MLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRF 165
Query: 294 DEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKL 353
EA + + GY+P Y T+ LCE G +A ++ K G P+ T L
Sbjct: 166 YEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSL 225
Query: 354 VTGL 357
+T L
Sbjct: 226 ITRL 229
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 95/216 (43%), Gaps = 3/216 (1%)
Query: 103 SQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFP 162
S I +YG+ L A + M + P++ + N+L+ I E ++ L+
Sbjct: 258 SALIDVYGKEGQLLEAKKQYNEMIQR-SVNPNIVTYNSLINGLCIHGLLDEAKKV-LNVL 315
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
+ P+ TYNT+I + ++ IL M R+ V + T++ +G+ KF
Sbjct: 316 VSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKF 375
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
KVL M G+ P + T+N+ + LC + +A L+ + ++++
Sbjct: 376 SAAEKVLGRMVS-CGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNI 434
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTL 318
+I G C +++A +F + +G P+ Y T+
Sbjct: 435 IIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITM 470
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 94/205 (45%), Gaps = 4/205 (1%)
Query: 151 YKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFS 210
+ + ++ D +++ + P + ++ ++ + A+ +V S+ ++ + + +F+
Sbjct: 60 FNDALTLFCDMAESHPL-PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 211 NAIEGFYSEKKFEEVGKVL-KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMI 269
I+ F + L KMM K G P++ T+ + C + R EA +L+ ++
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMM--KLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIV 176
Query: 270 SGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFE 329
G +PN V ++ +I C +G ++ A V MKK G +P+ Y +L L G +
Sbjct: 177 GLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWG 236
Query: 330 SAFEITKESMDKGWVPNFTTMKKLV 354
+ I + M G P+ T L+
Sbjct: 237 VSARILSDMMRMGISPDVITFSALI 261
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 6/175 (3%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
P+ + N L+ AK + +I ++ + D TYNT+ + + ++G S+
Sbjct: 322 PNAVTYNTLINGYCKAKRVDDGMKILCVMSRD-GVDGDTFTYNTLYQGYCQAGKFSAAEK 380
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMME--EKYGMSPALSTYNVRIL 250
+L M V P+ TF+ ++G K +GK L +E +K + TYN+ I
Sbjct: 381 VLGRMVSCGVHPDMYTFNILLDGLCDHGK---IGKALVRLEDLQKSKTVVGIITYNIIIK 437
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKK 305
LCK + +A L + G P+ +++ ++ G + EA +++ M+K
Sbjct: 438 GLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQK 492
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 117/253 (46%), Gaps = 3/253 (1%)
Query: 117 NAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNT 176
+A+ FT M ++ + P+V + ++L+ + + + SR+ D + I P+V T+N
Sbjct: 278 DALNLFTEMENK-GVRPNVITYSSLISCLCNYERWSDASRLLSDMIER-KINPNVVTFNA 335
Query: 177 VIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKY 236
+I +F + G + EM + S+ P+ T+S+ I GF + +E + ++M K
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK- 394
Query: 237 GMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEA 296
P + TYN I CK KR E L + M G N V+++ LIHG+ + D A
Sbjct: 395 DCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 454
Query: 297 KKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTG 356
+ VF M G P Y TL LC+ G E A + + P T ++ G
Sbjct: 455 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 514
Query: 357 LVGVSKTDDAKEL 369
+ K +D +L
Sbjct: 515 MCKAGKVEDGWDL 527
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 120/268 (44%), Gaps = 3/268 (1%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
Y + + +AV +M E P + L+ + E + +D Q
Sbjct: 165 YCHGKRISDAVALVDQMV-EMGYRPDTITFTTLIHGLFLHNKASEAVAL-VDRMVQRGCQ 222
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P++ TY V+ + G +++L++M+ + N V +S I+ + ++ +
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 282
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
ME K G+ P + TY+ I LC +R S+A LL MI PN V+F+ LI +
Sbjct: 283 FTEMENK-GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFV 341
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
EG L EA+K++ +M KR P+ Y +L + C + A + + + K PN
Sbjct: 342 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 401
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQVKEK 376
T L+ G + D+ EL +++ ++
Sbjct: 402 TYNTLINGFCKAKRIDEGVELFREMSQR 429
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 116/248 (46%), Gaps = 2/248 (0%)
Query: 128 EFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGST 187
E +I P+V + NAL+ A + E ++Y + K SI PD+ TY+++I F
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRL 381
Query: 188 SSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNV 247
+ M PN VT++ I GF K+ +E ++ + M ++ G+ TY
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR-GLVGNTVTYTT 440
Query: 248 RILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRG 307
I + + A+ + + M+S G PN ++++ L+ G C G L++A VF +++
Sbjct: 441 LIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 500
Query: 308 YKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAK 367
+P Y + +C+ G E +++ KG P+ +++G ++A
Sbjct: 501 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEAD 560
Query: 368 ELIKQVKE 375
L ++++E
Sbjct: 561 ALFRKMRE 568
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 108/244 (44%), Gaps = 2/244 (0%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
PS+ N LL A K + V + + I ++ TYN +I F S +
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQR-LGISHNLYTYNILINCFCRRSQISLALA 141
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
+L +M + P+ VT S+ + G+ K+ + ++ M E G P T+ I L
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE-MGYRPDTITFTTLIHGL 200
Query: 253 CKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPES 312
+ SEA AL+ M+ G +PN V++ +++G C G++D A + M+ +
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANV 260
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQ 372
Y T+ LC+ + A + E +KG PN T L++ L + DA L+
Sbjct: 261 VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSD 320
Query: 373 VKEK 376
+ E+
Sbjct: 321 MIER 324
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 1/181 (0%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P+V TYNT+I F ++ + EM + + N VT++ I GF+ + + V
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
K M G+ P + TYN + LCK + +A + + + +P +++ +I G C
Sbjct: 458 FKQMVSD-GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 516
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
G +++ +F + +G KP+ Y T+ C G E A + ++ + G +P+
Sbjct: 517 KAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSG 576
Query: 349 T 349
T
Sbjct: 577 T 577
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 96/209 (45%), Gaps = 1/209 (0%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
+P + T ++++ + S +++ +M RP+ +TF+ I G + K E
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
++ M ++ G P L TY V + LCK A LL M + + N V +S +I
Sbjct: 212 LVDRMVQR-GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL 270
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
C + D+A +F +M+ +G +P Y +L LC + A + + +++ PN
Sbjct: 271 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNV 330
Query: 348 TTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
T L+ V K +A++L ++ ++
Sbjct: 331 VTFNALIDAFVKEGKLVEAEKLYDEMIKR 359
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 1/208 (0%)
Query: 174 YNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMME 233
Y ++++ S + M ++ P+ F+ + KKF+ V + + M+
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 234 EKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNL 293
+ G+S L TYN+ I C+ + S A ALL M+ G +P+ V+ S L++GYC +
Sbjct: 113 -RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 294 DEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKL 353
+A + M + GY+P++ + TL H L A + + +G PN T +
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 354 VTGLVGVSKTDDAKELIKQVKEKFTESS 381
V GL D A L+ +++ E++
Sbjct: 232 VNGLCKRGDIDLAFNLLNKMEAAKIEAN 259
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 98/195 (50%), Gaps = 1/195 (0%)
Query: 164 NYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFE 223
N I+PDV TY+++I G S +LS+M + PN VTFS I+ F E K
Sbjct: 286 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 345
Query: 224 EVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHL 283
E K+ M ++ + P + TY+ I C R EAK + + MIS PN V++S L
Sbjct: 346 EAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTL 404
Query: 284 IHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGW 343
I G+C ++E ++F +M +RG + Y TL H + D ++A + K+ + G
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Query: 344 VPNFTTMKKLVTGLV 358
PN T L+ GL
Sbjct: 465 HPNILTYNILLDGLC 479
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 121/268 (45%), Gaps = 3/268 (1%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
Y ++ + +AV +M E P + L+ + E + +D Q
Sbjct: 163 YCHSKRISDAVALVDQMV-EMGYKPDTFTFTTLIHGLFLHNKASEAVAL-VDQMVQRGCQ 220
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
PD+ TY TV+ + G S+L +M++ + + V ++ I+G K ++ +
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNL 280
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
M+ K G+ P + TY+ I LC R S+A LL MI PN V+FS LI +
Sbjct: 281 FTEMDNK-GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 339
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
EG L EA+K++ +M KR P+ Y +L + C + A + + + K PN
Sbjct: 340 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 399
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQVKEK 376
T L+ G + ++ EL +++ ++
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREMSQR 427
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 133/287 (46%), Gaps = 14/287 (4%)
Query: 93 RPDLRNERFLSQSIVLYGQ----ARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIA 148
RPD+ L + YG+ +R+L + + E +I P+V + +AL+ A +
Sbjct: 290 RPDVFTYSSLISCLCNYGRWSDASRLLSDMI--------ERKINPNVVTFSALIDAFVKE 341
Query: 149 KDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVT 208
E ++Y + K SI PD+ TY+++I F + M PN VT
Sbjct: 342 GKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 400
Query: 209 FSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGM 268
+S I+GF K+ EE ++ + M ++ G+ TY I + + A+ + + M
Sbjct: 401 YSTLIKGFCKAKRVEEGMELFREMSQR-GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 459
Query: 269 ISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDF 328
+S G PN ++++ L+ G C G L +A VF +++ +P+ Y + +C+ G
Sbjct: 460 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKV 519
Query: 329 ESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
E +E+ KG PN +++G ++A L+K++KE
Sbjct: 520 EDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKE 566
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 1/206 (0%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P+V TY+T+IK F ++ + EM + + N VT++ I GF+ + + V
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
K M G+ P + TYN+ + LCK + ++A + + + +P+ +++ +I G C
Sbjct: 456 FKQMVS-VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 514
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
G +++ ++F ++ +G P Y T+ C G E A + K+ + G +PN
Sbjct: 515 KAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSG 574
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQVK 374
T L+ + + + ELIK+++
Sbjct: 575 TYNTLIRARLRDGDREASAELIKEMR 600
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 111/232 (47%), Gaps = 3/232 (1%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
P+V + + L+ AK +E ++ + + + V TY T+I F ++ +
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV-TYTTLIHGFFQARDCDNAQM 454
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
+ +M V PN +T++ ++G K + V + ++ + M P + TYN+ I +
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ-RSTMEPDIYTYNIMIEGM 513
Query: 253 CKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPES 312
CK + + L + G PN ++++ +I G+C +G+ +EA + MK+ G P S
Sbjct: 514 CKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNS 573
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTD 364
Y TL GD E++ E+ KE G+ + +T+ LVT ++ + D
Sbjct: 574 GTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRLD 624
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 1/188 (0%)
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
+ +M ++ P+ V F+ + KFE V + + M+ G+S L TY++ I
Sbjct: 70 LFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQ-TLGISHDLYTYSIFINCF 128
Query: 253 CKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPES 312
C+ + S A A+L M+ G +P+ V+ S L++GYC + +A + M + GYKP++
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQ 372
+ TL H L A + + + +G P+ T +V GL D A L+K+
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKK 248
Query: 373 VKEKFTES 380
+++ E+
Sbjct: 249 MEKGKIEA 256
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 154/337 (45%), Gaps = 22/337 (6%)
Query: 45 RILDICRAASLTPDFHLDRIALSVAISKLKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQ 104
R+LD R+ +PD I + S+ K ++Q L D +P + ++
Sbjct: 179 RVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSD--NCQPTV-----ITY 231
Query: 105 SIVLYGQARMLPNAVTAFTRMRDEF---QITPSVKSLNALLFA----ALIAKDYKEVSRI 157
+I++ +A ML V ++ DE + P + + N ++ ++ + ++ V +
Sbjct: 232 TILI--EATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNL 289
Query: 158 YLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFY 217
L +PDV +YN ++++ G ++++M PN VT+S I
Sbjct: 290 ELK-----GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC 344
Query: 218 SEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNW 277
+ K EE +LK+M+EK G++P +Y+ I + C+ R A L+ MIS G P+
Sbjct: 345 RDGKIEEAMNLLKLMKEK-GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403
Query: 278 VSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKE 337
V+++ ++ C G D+A ++F + + G P S Y T+ L GD A + E
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 338 SMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVK 374
M G P+ T +++ L D+A EL+ ++
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMR 500
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 121/261 (46%), Gaps = 3/261 (1%)
Query: 115 LPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETY 174
+ +A RMR + +P + N ++ +L ++ +++ L+ + + QP V TY
Sbjct: 174 IDDATRVLDRMRSK-DFSPDTVTYN-IMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITY 231
Query: 175 NTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE 234
+I++ G ++ EM ++P+ T++ I G E + ++++ +E
Sbjct: 232 TILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLEL 291
Query: 235 KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLD 294
K G P + +YN+ + +L + E + L+ M S PN V++S LI C +G ++
Sbjct: 292 K-GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 350
Query: 295 EAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
EA + MK++G P++ Y L C G + A E + + G +P+ ++
Sbjct: 351 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 410
Query: 355 TGLVGVSKTDDAKELIKQVKE 375
L K D A E+ ++ E
Sbjct: 411 ATLCKNGKADQALEIFGKLGE 431
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 2/227 (0%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
QPDV YN +I F + +L M P+ VT++ I S K + K
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
VL + P + TY + I + EA L+ M+S G KP+ +++ +I G
Sbjct: 215 VLNQLLSD-NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
C EG +D A ++ +++ +G +P+ Y L L G +E ++ + + PN
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 348 TTMKKLVTGLVGVSKTDDAKELIKQVKEK-FTESSDKWDEIEAELIK 393
T L+T L K ++A L+K +KEK T + +D + A +
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCR 380
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 104/215 (48%), Gaps = 5/215 (2%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
PDV +IK F + ++ +++ +P+ ++ I GF + ++ +
Sbjct: 121 NPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATR 179
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
VL M K SP TYN+ I SLC + A +L ++S +P ++++ LI
Sbjct: 180 VLDRMRSK-DFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEAT 238
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
EG +DEA K+ +M RG KP+ Y T+ +C+ G + AFE+ + KG P+
Sbjct: 239 MLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDV 298
Query: 348 TTMKKLVTGLVGVSKTDDAKELIKQVKEKFTESSD 382
+ L+ L+ K ++ ++L+ ++ F+E D
Sbjct: 299 ISYNILLRALLNQGKWEEGEKLMTKM---FSEKCD 330
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 1/211 (0%)
Query: 159 LDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYS 218
L K + PD +Y+ +I +F G L M + P+ V ++ +
Sbjct: 356 LKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCK 415
Query: 219 EKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWV 278
K ++ ++ + E G SP S+YN +L A ++ M+S G P+ +
Sbjct: 416 NGKADQALEIFGKLGE-VGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEI 474
Query: 279 SFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKES 338
+++ +I C EG +DEA ++ DM+ + P Y + C+ E A + +
Sbjct: 475 TYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESM 534
Query: 339 MDKGWVPNFTTMKKLVTGLVGVSKTDDAKEL 369
+ G PN TT L+ G+ +A EL
Sbjct: 535 VGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 94/215 (43%), Gaps = 4/215 (1%)
Query: 124 RMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAE 183
++ E +TP S + L+ AA + +V+ +L+ + PD+ YNTV+ + +
Sbjct: 357 KLMKEKGLTPDAYSYDPLI-AAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCK 415
Query: 184 SGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSE-KKFEEVGKVLKMMEEKYGMSPAL 242
+G I ++ PN+ +++ +S K + +L+MM G+ P
Sbjct: 416 NGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSN--GIDPDE 473
Query: 243 STYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFAD 302
TYN I LC+ EA LL M S P+ V+++ ++ G+C +++A V
Sbjct: 474 ITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLES 533
Query: 303 MKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKE 337
M G +P Y L + G A E+ +
Sbjct: 534 MVGNGCRPNETTYTVLIEGIGFAGYRAEAMELAND 568
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 69/137 (50%), Gaps = 1/137 (0%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P+ +YNT+ + SG ++ EM N + P+ +T+++ I E +E ++
Sbjct: 436 PNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFEL 495
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
L M P++ TYN+ +L CK R +A +L+ M+ G +PN +++ LI G
Sbjct: 496 LVDMR-SCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIG 554
Query: 289 WEGNLDEAKKVFADMKK 305
+ G EA ++ D+ +
Sbjct: 555 FAGYRAEAMELANDLVR 571
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 165/388 (42%), Gaps = 44/388 (11%)
Query: 34 LHLLKSETNPERILDICRAASLTPDFHLDRIALSVAISKLKDGNHFSTIDQFLRDLPTSR 93
+ L+ + + L+ R AS P F R KL F T+ Q L ++P S
Sbjct: 47 VRLILDQKSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSI 106
Query: 94 PDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFA--------- 144
++ I +G+AR++ ++ + +F I PS+K N++L
Sbjct: 107 GLPPDDAIFVTIIRGFGRARLIKRVISV-VDLVSKFGIKPSLKVFNSILDVLVKEDIDIA 165
Query: 145 --------------------ALIAKDYKEVSRI-----YLDFPKNYSIQPDVETYNTVIK 179
++ K +RI L K + P+ YNT++
Sbjct: 166 REFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLH 225
Query: 180 SFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKY--G 237
+ ++G S++SEM PN VTF+ I + +E+K + + ++E+ + G
Sbjct: 226 ALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKLIQ---SMVLLEKCFSLG 278
Query: 238 MSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAK 297
P + T + LC R SEA +L+ + S G K + V+ + L+ GYC G + A+
Sbjct: 279 FVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQ 338
Query: 298 KVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGL 357
+ F +M+++GY P Y L C+ G +SA + + NF T L+ GL
Sbjct: 339 RFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGL 398
Query: 358 VGVSKTDDAKELIKQVKEKFTESSDKWD 385
+TDD ++++ +++ T + D
Sbjct: 399 SIGGRTDDGLKILEMMQDSDTVHGARID 426
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 5/216 (2%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEM-DRNSVRPNAVT-FSNAIEGFYSEK 220
K +I+ + T+NT+I+ + G T IL M D ++V + ++ I GFY E
Sbjct: 380 KTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKEN 439
Query: 221 KFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSF 280
++E+ + L ME+ + P + +++SLC+ + K MI G P+ +
Sbjct: 440 RWEDALEFLLKMEKLF---PRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVS 496
Query: 281 SHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMD 340
LIH Y G ++E+ ++ DM RGY P S + + C+ + + ++ +
Sbjct: 497 HCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAE 556
Query: 341 KGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+G VP+ + L+ L A L ++ EK
Sbjct: 557 RGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEK 592
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 134/296 (45%), Gaps = 10/296 (3%)
Query: 82 IDQFLRD-LPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNA 140
ID+ ++D PT+ + I G+A + + V F + + F P S NA
Sbjct: 175 IDEMIKDGYPTTACTF------NLLICTCGEAGLARDVVEQFIKSKT-FNYRPYKHSYNA 227
Query: 141 LLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRN 200
+L + L K YK + +Y ++ PDV TYN V+ + G T +Y +L EM ++
Sbjct: 228 ILHSLLGVKQYKLIDWVYEQMLED-GFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKD 286
Query: 201 SVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSE 260
P+ T++ + + K +L M E G+ P + + I L + +
Sbjct: 287 GFSPDLYTYNILLHHLATGNKPLAALNLLNHMRE-VGVEPGVIHFTTLIDGLSRAGKLEA 345
Query: 261 AKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAH 320
K + + G P+ V ++ +I GY G L++A+++F +M ++G P Y ++
Sbjct: 346 CKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIR 405
Query: 321 FLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
C G F+ A + KE +G PNF LV L K +A E++K + EK
Sbjct: 406 GFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEK 461
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 103/273 (37%), Gaps = 69/273 (25%)
Query: 173 TYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFS-------------NAIEGFYSE 219
Y+ ++K FAE G ++ ++ EM ++ A TF+ + +E F
Sbjct: 154 CYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKS 213
Query: 220 KKFEE--------------VG-KVLKMMEEKY------GMSPALSTYNVRILSLCKLKRT 258
K F +G K K+++ Y G +P + TYN+ + + +L +T
Sbjct: 214 KTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKT 273
Query: 259 SEAKALLQGMISGGRKPNW-----------------------------------VSFSHL 283
LL M+ G P+ + F+ L
Sbjct: 274 DRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTL 333
Query: 284 IHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGW 343
I G G L+ K + K G P+ CY + GG+ E A E+ KE +KG
Sbjct: 334 IDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQ 393
Query: 344 VPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+PN T ++ G K +A L+K+++ +
Sbjct: 394 LPNVFTYNSMIRGFCMAGKFKEACALLKEMESR 426
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 5/260 (1%)
Query: 98 NERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVS-R 156
N+ I Y QAR L A AFT +R + T S+ + NAL+ +L+ + E++
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSK-GFTVSIDACNALI-GSLVRIGWVELAWG 221
Query: 157 IYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGF 216
+Y + ++ + +V T N ++ + + G V + LS++ V P+ VT++ I +
Sbjct: 222 VYQEISRS-GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAY 280
Query: 217 YSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPN 276
S+ EE +++ M K G SP + TYN I LCK + AK + M+ G P+
Sbjct: 281 SSKGLMEEAFELMNAMPGK-GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 277 WVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITK 336
++ L+ C +G++ E +KVF+DM+ R P+ C+ ++ G+ + A
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 337 ESMDKGWVPNFTTMKKLVTG 356
+ G +P+ L+ G
Sbjct: 400 SVKEAGLIPDNVIYTILIQG 419
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 97/174 (55%), Gaps = 3/174 (1%)
Query: 140 ALLFAALIAKDY-KEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMD 198
++L AL +K + E R++ D + +I+P V N++IK + SG+ S S L +M
Sbjct: 554 SILVNALCSKGHLAEAFRVW-DEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 199 RNSVRPNAVTFSNAIEGFYSEKKFEEV-GKVLKMMEEKYGMSPALSTYNVRILSLCKLKR 257
P+ ++++ I GF E+ + G V KM EE+ G+ P + TYN + C+ +
Sbjct: 613 SEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ 672
Query: 258 TSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPE 311
EA+ +L+ MI G P+ +++ +I+G+ + NL EA ++ +M +RG+ P+
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 1/205 (0%)
Query: 171 VETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLK 230
++ N +I S G + + E+ R+ V N T + + + K E+VG L
Sbjct: 200 IDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLS 259
Query: 231 MMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWE 290
++EK G+ P + TYN I + EA L+ M G P +++ +I+G C
Sbjct: 260 QVQEK-GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKH 318
Query: 291 GNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTM 350
G + AK+VFA+M + G P+S Y +L C+ GD ++ + + VP+
Sbjct: 319 GKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCF 378
Query: 351 KKLVTGLVGVSKTDDAKELIKQVKE 375
+++ D A VKE
Sbjct: 379 SSMMSLFTRSGNLDKALMYFNSVKE 403
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 113/247 (45%), Gaps = 9/247 (3%)
Query: 105 SIVLYGQARM--LPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFP 162
+I++ G ++ L NA+ F +M+++ +I V + N LL D I+ D
Sbjct: 484 TILIDGHCKLGNLQNAMELFQKMKEK-RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 542
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
I P +Y+ ++ + G + + + EM +++P + ++ I+G+
Sbjct: 543 SK-EILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNA 601
Query: 223 EEVGKVL-KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMI--SGGRKPNWVS 279
+ L KM+ E G P +YN I + + S+A L++ M GG P+ +
Sbjct: 602 SDGESFLEKMISE--GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFT 659
Query: 280 FSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESM 339
++ ++HG+C + + EA+ V M +RG P+ Y + + + AF I E +
Sbjct: 660 YNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEML 719
Query: 340 DKGWVPN 346
+G+ P+
Sbjct: 720 QRGFSPD 726
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 114/263 (43%), Gaps = 16/263 (6%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
++P + +LL A D E +++ D ++ + PD+ +++++ F SG+
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFSDM-RSRDVVPDLVCFSSMMSLFTRSGNLDKA 394
Query: 191 YSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRIL 250
+ + + P+ V ++ I+G Y K V L+ + G + + TYN +
Sbjct: 395 LMYFNSVKEAGLIPDNVIYTILIQG-YCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILH 453
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
LCK K EA L M P+ + + LI G+C GNL A ++F MK++ +
Sbjct: 454 GLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRL 513
Query: 311 ESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELI 370
+ Y TL + GD ++A EI + + K +P + LV L
Sbjct: 514 DVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCS----------- 562
Query: 371 KQVKEKFTESSDKWDEIEAELIK 393
K E+ WDE+ ++ IK
Sbjct: 563 ---KGHLAEAFRVWDEMISKNIK 582
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 96/207 (46%), Gaps = 1/207 (0%)
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL 229
DV TYNT++ + + +EM ++ P++ T + I+G + ++
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 230 KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW 289
+ M+EK + + TYN + K+ AK + M+S P +S+S L++ C
Sbjct: 504 QKMKEKR-IRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCS 562
Query: 290 EGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTT 349
+G+L EA +V+ +M + KP ++ C G+ ++ + +G+VP+ +
Sbjct: 563 KGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCIS 622
Query: 350 MKKLVTGLVGVSKTDDAKELIKQVKEK 376
L+ G V A L+K+++E+
Sbjct: 623 YNTLIYGFVREENMSKAFGLVKKMEEE 649
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 93/232 (40%), Gaps = 31/232 (13%)
Query: 171 VETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLK 230
+E N++ +F+ GS SV+ +L I + +K E +
Sbjct: 148 LEIVNSLDSTFSNCGSNDSVFDLL------------------IRTYVQARKLREAHEAFT 189
Query: 231 MMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWE 290
++ K G + ++ N I SL ++ A + Q + G N + + +++ C +
Sbjct: 190 LLRSK-GFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKD 248
Query: 291 GNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTM 350
G +++ + ++++G P+ Y TL G E AFE+ KG+ P T
Sbjct: 249 GKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTY 308
Query: 351 KKLVTGLVGVSKTDDAKELIKQV------------KEKFTESSDKWDEIEAE 390
++ GL K + AKE+ ++ + E+ K D +E E
Sbjct: 309 NTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 142/317 (44%), Gaps = 17/317 (5%)
Query: 70 ISKLKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYG--QARMLPNAVTAFTRMRD 127
+ K+K+ S+ID+F +PD + +I+++G Q+ +A+ F M
Sbjct: 134 LEKMKE--RLSSIDEF------GKPDA-----CTYNILIHGCSQSGCFDDALKLFDEMVK 180
Query: 128 EFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGST 187
+ ++ P+ + L+ KE ++ D K Y ++P V Y ++IK+ + G
Sbjct: 181 K-KVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGEL 239
Query: 188 SSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNV 247
S + + E ++ +A +S I + EV +L+ M EK G P TYNV
Sbjct: 240 SFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEK-GCKPDTVTYNV 298
Query: 248 RILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRG 307
I C + A +L M+ G KP+ +S++ ++ + +EA +F DM +RG
Sbjct: 299 LINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRG 358
Query: 308 YKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAK 367
P++ Y + LCEG FE A I E + KG+ P ++ + L K +
Sbjct: 359 CSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILS 418
Query: 368 ELIKQVKEKFTESSDKW 384
++I + +D W
Sbjct: 419 KVISSLHRGIAGDADVW 435
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 140/313 (44%), Gaps = 38/313 (12%)
Query: 97 RNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSR 156
R S+ +V Y +A L +A+ T M+ + P++ N + + A ++ R
Sbjct: 240 RTPEAFSRVMVSYSRAGQLRDALKVLTLMQ-RAGVEPNLLICNTTIDVFVRANRLEKALR 298
Query: 157 IYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGF 216
+L+ + I P+V TYN +I+ + + +L +M P+ V++ +
Sbjct: 299 -FLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYL 357
Query: 217 YSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRI--------------------------- 249
EK+ EV ++K M +++G+ P TYN I
Sbjct: 358 CKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRID 417
Query: 250 --------LSLCKLKRTSEAKALLQGMISGGR-KPNWVSFSHLIHGYCWEGNLDEAKKVF 300
+LCK R SEAK L+ M+S G P+ V+++ +++G+C G +D+AKK+
Sbjct: 418 KLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLL 477
Query: 301 ADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGV 360
M G+KP + Y L + +C G A E+ S + W PN T ++ GL
Sbjct: 478 QVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRRE 537
Query: 361 SKTDDAKELIKQV 373
K +A ++++++
Sbjct: 538 GKLSEACDVVREM 550
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 99/224 (44%)
Query: 153 EVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNA 212
EV + K + + PD TYNT+I + L + R + + +S
Sbjct: 365 EVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAI 424
Query: 213 IEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGG 272
+ E + E ++ M K P + TY + C+L +AK LLQ M + G
Sbjct: 425 VHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHG 484
Query: 273 RKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAF 332
KPN VS++ L++G C G EA+++ ++ + P S Y + H L G A
Sbjct: 485 HKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEAC 544
Query: 333 EITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
++ +E + KG+ P + L+ L +T +A++ +++ K
Sbjct: 545 DVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNK 588
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 134/314 (42%), Gaps = 7/314 (2%)
Query: 62 DRIALSVAISKLKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIV--LYGQARMLPNAV 119
D++ + I L +H FL+D R ++ +IV L + RM A
Sbjct: 382 DQVTYNTLIHMLTKHDHADEALWFLKD--AQEKGFRIDKLGYSAIVHALCKEGRM-SEAK 438
Query: 120 TAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIK 179
M + P V + A++ + + ++ L + +P+ +Y ++
Sbjct: 439 DLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKL-LQVMHTHGHKPNTVSYTALLN 497
Query: 180 SFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMS 239
+G + +++ + + PN++T+S + G E K E V++ M K G
Sbjct: 498 GMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLK-GFF 556
Query: 240 PALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKV 299
P N+ + SLC+ RT EA+ ++ ++ G N V+F+ +IHG+C LD A V
Sbjct: 557 PGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSV 616
Query: 300 FADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVG 359
DM + Y TL L + G A E+ K+ + KG P T + ++
Sbjct: 617 LDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQ 676
Query: 360 VSKTDDAKELIKQV 373
+ K DD +++++
Sbjct: 677 MGKVDDLVAILEKM 690
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 108/244 (44%), Gaps = 3/244 (1%)
Query: 124 RMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAE 183
+M E + P + N L+ L D+ + + +L + + D Y+ ++ + +
Sbjct: 372 KMAKEHGLVPDQVTYNTLIHM-LTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCK 430
Query: 184 SGSTSSVYSILSEM-DRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPAL 242
G S +++EM + P+ VT++ + GF + ++ K+L++M +G P
Sbjct: 431 EGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMH-THGHKPNT 489
Query: 243 STYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFAD 302
+Y + +C+ ++ EA+ ++ PN +++S ++HG EG L EA V +
Sbjct: 490 VSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVRE 549
Query: 303 MKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSK 362
M +G+ P L LC G A + +E ++KG N ++ G +
Sbjct: 550 MVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDE 609
Query: 363 TDDA 366
D A
Sbjct: 610 LDAA 613
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 110/237 (46%), Gaps = 5/237 (2%)
Query: 141 LLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRN 200
LL +L +R +++ N +V + TVI F ++ + S+L +M
Sbjct: 564 LLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLI 623
Query: 201 SVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSE 260
+ + T++ ++ + + E +++K M K G+ P TY I C++ + +
Sbjct: 624 NKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHK-GIDPTPVTYRTVIHRYCQMGKVDD 682
Query: 261 AKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPES-PCYFTLA 319
A+L+ MIS R+ ++ +I C G L+EA + + + + ++ CY +
Sbjct: 683 LVAILEKMIS--RQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALME 740
Query: 320 HFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+L +G SA+++ ++ +P+ +KL LV K D+A +L+ ++ E+
Sbjct: 741 GYLKKGVPL-SAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVER 796
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 74/177 (41%), Gaps = 3/177 (1%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
DV TY T++ + + G + ++ +M + P VT+ I + K +++
Sbjct: 626 HADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVA 685
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
+L+ M + + YN I LC L + EA LL ++ + + + L+ GY
Sbjct: 686 ILEKMISR---QKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGY 742
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWV 344
+G A KV M R P+ L+ L G + A ++ +++G +
Sbjct: 743 LKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHI 799
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 108/208 (51%), Gaps = 1/208 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
I+PDV Y T+I S ++G + S+ +M+ +RP+ V +++ + G + ++ +
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
+L+ M ++ + P + T+N I + K + +A+ L MI PN +++ LI+
Sbjct: 232 DSLLRGMTKR-KIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
G+C EG +DEA+++F M+ +G P+ Y +L + C+ + A +I E KG
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIKQV 373
N T L+ G V K + A+E+ +
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 134/321 (41%), Gaps = 44/321 (13%)
Query: 93 RPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYK 152
RPD+ L + G+ R + + T+ + I P V + NAL+ A + +
Sbjct: 209 RPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRK----IKPDVITFNALIDAFVKEGKFL 264
Query: 153 EVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNA 212
+ +Y + + SI P++ TY ++I F G + M+ P+ V +++
Sbjct: 265 DAEELYNEMIR-MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSL 323
Query: 213 IEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGG 272
I GF KK ++ K+ M +K G++ TY I ++ + + A+ + M+S G
Sbjct: 324 INGFCKCKKVDDAMKIFYEMSQK-GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG 382
Query: 273 RKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKR---GYKPESPCYFTLAHFLCEGGDFE 329
PN +++ L+H C+ G + +A +F DM+KR G P Y L H LC G E
Sbjct: 383 VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLE 442
Query: 330 SAF----EITKESMD-------------------------------KGWVPNFTTMKKLV 354
A ++ K MD KG PN T ++
Sbjct: 443 KALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI 502
Query: 355 TGLVGVSKTDDAKELIKQVKE 375
+GL +A L +++KE
Sbjct: 503 SGLFREGLKHEAHVLFRKMKE 523
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 104/218 (47%), Gaps = 1/218 (0%)
Query: 159 LDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYS 218
D +NY I+PDV Y +++ SG S+L M + ++P+ +TF+ I+ F
Sbjct: 200 FDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK 259
Query: 219 EKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWV 278
E KF + ++ M + ++P + TY I C EA+ + M + G P+ V
Sbjct: 260 EGKFLDAEELYNEMI-RMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 279 SFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKES 338
+++ LI+G+C +D+A K+F +M ++G + Y TL + G A E+
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 339 MDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+ +G PN T L+ L K A + + ++++
Sbjct: 379 VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKR 416
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 113/259 (43%), Gaps = 3/259 (1%)
Query: 118 AVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTV 177
A+ FT M E + PS+ LL K + V + D + + D+ T N +
Sbjct: 56 ALDLFTHMV-ESRPLPSIIDFTKLLNVIAKMKKFDVVINL-CDHLQIMGVSHDLYTCNLL 113
Query: 178 IKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYG 237
+ F +S S L +M + P+ VTF++ I GF + EE ++ M E G
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE-MG 172
Query: 238 MSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAK 297
+ P + Y I SLCK + A +L M + G +P+ V ++ L++G C G +A
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 298 KVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGL 357
+ M KR KP+ + L + G F A E+ E + PN T L+ G
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 358 VGVSKTDDAKELIKQVKEK 376
D+A+++ ++ K
Sbjct: 293 CMEGCVDEARQMFYLMETK 311
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 1/211 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
+PD+ T+ ++I F S++++M ++P+ V ++ I+
Sbjct: 137 GFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYA 196
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
+ ME YG+ P + Y + LC R +A +LL+GM KP+ ++F+ LI
Sbjct: 197 LSLFDQMEN-YGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
+ EG +A++++ +M + P Y +L + C G + A ++ KG P
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+ L+ G K DDA ++ ++ +K
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQK 346
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 93/204 (45%), Gaps = 1/204 (0%)
Query: 173 TYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMM 232
Y ++++ S + + + M + P+ + F+ + KKF+ V + +
Sbjct: 39 NYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHL 98
Query: 233 EEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGN 292
+ G+S L T N+ + C+ + A + L M+ G +P+ V+F+ LI+G+C
Sbjct: 99 Q-IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNR 157
Query: 293 LDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKK 352
++EA + M + G KP+ Y T+ LC+ G A + + + G P+
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTS 217
Query: 353 LVTGLVGVSKTDDAKELIKQVKEK 376
LV GL + DA L++ + ++
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKR 241
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 3/210 (1%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
+P+V TY T+I+ ++ + + ++M N RPN VT++ + G ++ +
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW 244
Query: 228 VLK-MMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHG 286
+L+ MM+ + + P + T+ I + K+ + EAK L MI P+ ++ LI+G
Sbjct: 245 LLRDMMKRR--IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 287 YCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPN 346
C G LDEA+++F M++ G P Y TL H C+ E +I E KG V N
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 347 FTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
T L+ G V + D A+E+ Q+ +
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSR 392
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 110/246 (44%), Gaps = 2/246 (0%)
Query: 130 QITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSS 189
+I P+V + AL+ A + E +Y + S+ PDV TY ++I G
Sbjct: 253 RIEPNVITFTALIDAFVKVGKLMEAKELY-NVMIQMSVYPDVFTYGSLINGLCMYGLLDE 311
Query: 190 VYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRI 249
+ M+RN PN V ++ I GF K+ E+ K+ M +K G+ TY V I
Sbjct: 312 ARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK-GVVANTITYTVLI 370
Query: 250 LSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYK 309
C + R A+ + M S P+ +++ L+ G C G +++A +F M+KR
Sbjct: 371 QGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMD 430
Query: 310 PESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKEL 369
Y + +C+ G E AF++ KG PN T +++G +A L
Sbjct: 431 INIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSL 490
Query: 370 IKQVKE 375
K++KE
Sbjct: 491 FKKMKE 496
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 111/257 (43%), Gaps = 3/257 (1%)
Query: 113 RMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVE 172
R L +AV F +M P+V + NAL+ + + + + D K I+P+V
Sbjct: 202 RHLNHAVELFNQMGTNGS-RPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKR-RIEPNVI 259
Query: 173 TYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMM 232
T+ +I +F + G + + M + SV P+ T+ + I G +E ++ +M
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 233 EEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGN 292
E G P Y I CK KR + + M G N ++++ LI GYC G
Sbjct: 320 ERN-GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGR 378
Query: 293 LDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKK 352
D A++VF M R P+ Y L LC G E A I + + N T
Sbjct: 379 PDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTI 438
Query: 353 LVTGLVGVSKTDDAKEL 369
++ G+ + K +DA +L
Sbjct: 439 IIQGMCKLGKVEDAFDL 455
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 1/209 (0%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
+P+V TYN ++ E G +L +M + + PN +TF+ I+ F K E +
Sbjct: 220 RPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKE 279
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
+ +M + + P + TY I LC EA+ + M G PN V ++ LIHG+
Sbjct: 280 LYNVMIQM-SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGF 338
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
C +++ K+F +M ++G + Y L C G + A E+ + + P+
Sbjct: 339 CKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDI 398
Query: 348 TTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
T L+ GL K + A + + ++++
Sbjct: 399 RTYNVLLDGLCCNGKVEKALMIFEYMRKR 427
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 96/207 (46%), Gaps = 1/207 (0%)
Query: 173 TYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMM 232
+Y ++++ + + + + M + P+ + F+ + +++ V + + M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 233 EEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGN 292
+ G+ P L T N+ + +C + A L M+ G +P+ V+F+ L++GYC
Sbjct: 110 Q-ILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNR 168
Query: 293 LDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKK 352
+++A +F + G+KP Y TL LC+ A E+ + G PN T
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228
Query: 353 LVTGLVGVSKTDDAKELIKQVKEKFTE 379
LVTGL + + DA L++ + ++ E
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIE 255
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 106/255 (41%), Gaps = 7/255 (2%)
Query: 117 NAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNT 176
+A+ FTRM + PS+ LL Y V ++ + I P + T N
Sbjct: 66 DALDLFTRMVHS-RPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM-QILGIPPLLCTCNI 123
Query: 177 VIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKY 236
V+ S L +M + P+ VTF++ + G+ + E+ + + ++
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDA---IALFDQIL 180
Query: 237 GMS--PALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLD 294
GM P + TY I LCK + + A L M + G +PN V+++ L+ G C G
Sbjct: 181 GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG 240
Query: 295 EAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
+A + DM KR +P + L + G A E+ + P+ T L+
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 355 TGLVGVSKTDDAKEL 369
GL D+A+++
Sbjct: 301 NGLCMYGLLDEARQM 315
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 1/143 (0%)
Query: 173 TYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMM 232
TY +I+ + G + ++M P+ T++ ++G K E+ + + M
Sbjct: 365 TYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYM 424
Query: 233 EEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGN 292
++ M + TY + I +CKL + +A L + S G KPN ++++ +I G+C G
Sbjct: 425 RKR-EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGL 483
Query: 293 LDEAKKVFADMKKRGYKPESPCY 315
+ EA +F MK+ G+ P Y
Sbjct: 484 IHEADSLFKKMKEDGFLPNESVY 506
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 118/255 (46%), Gaps = 3/255 (1%)
Query: 115 LPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETY 174
+ +A+ F M + I P+V + ++L+ + + SR+ D + I PDV T+
Sbjct: 272 MDDALNLFKEMETK-GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER-KINPDVFTF 329
Query: 175 NTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE 234
+ +I +F + G + EM + S+ P+ VT+S+ I GF + +E ++ + M
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 389
Query: 235 KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLD 294
K+ P + TYN I CK KR E + + M G N V+++ LI G G+ D
Sbjct: 390 KHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 448
Query: 295 EAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
A+++F +M G P Y TL LC+ G E A + + P T ++
Sbjct: 449 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 508
Query: 355 TGLVGVSKTDDAKEL 369
G+ K +D +L
Sbjct: 509 EGMCKAGKVEDGWDL 523
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 131/275 (47%), Gaps = 15/275 (5%)
Query: 99 ERFLSQSIVLYGQARMLPNAVTAFTRMRD-----EFQIT----PSVKSLNALLFAALIAK 149
+R + SIV Y L N R+ + EF ++ P V + N L+ K
Sbjct: 354 KRSIDPSIVTYSS---LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 410
Query: 150 DYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTF 209
+E ++ + + + V TYN +I+ ++G I EM + V PN +T+
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTV-TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 469
Query: 210 SNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMI 269
+ ++G K E+ V + ++ + M P + TYN+ I +CK + + L +
Sbjct: 470 NTLLDGLCKNGKLEKAMVVFEYLQ-RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528
Query: 270 SGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFE 329
G KP+ V+++ +I G+C +G+ +EA +F +MK+ G P S CY TL GD E
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 588
Query: 330 SAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTD 364
++ E+ KE G+ + +T+ LVT ++ + D
Sbjct: 589 ASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRLD 622
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 114/244 (46%), Gaps = 2/244 (0%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
I PS+ + ++L+ + E +++ +F + PDV TYNT+IK F +
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMF-EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 191 YSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRIL 250
+ EM + + N VT++ I+G + + ++ K M G+ P + TYN +
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLD 474
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
LCK + +A + + + +P +++ +I G C G +++ +F ++ +G KP
Sbjct: 475 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 534
Query: 311 ESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELI 370
+ Y T+ C G E A + KE + G +PN L+ + + + ELI
Sbjct: 535 DVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELI 594
Query: 371 KQVK 374
K+++
Sbjct: 595 KEMR 598
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 103/214 (48%), Gaps = 1/214 (0%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
+P++ T ++++ + S S +++ +M +PN VTF+ I G + K E
Sbjct: 148 EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMA 207
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
++ M K G P L TY V + LCK T A LL M G +P + ++ +I G
Sbjct: 208 LIDRMVAK-GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 266
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
C ++D+A +F +M+ +G +P Y +L LC G + A + + +++ P+
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 348 TTMKKLVTGLVGVSKTDDAKELIKQVKEKFTESS 381
T L+ V K +A++L ++ ++ + S
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 119/263 (45%), Gaps = 5/263 (1%)
Query: 115 LPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYL-DFPKNYSIQPDVET 173
L +AV F M + PS+ + LL A IAK K I L + +N I + T
Sbjct: 62 LDDAVALFGEMVKS-RPFPSIIEFSKLLSA--IAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 174 YNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMME 233
Y+ +I F ++L +M + PN VT S+ + G+ K+ E ++ M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 234 EKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNL 293
G P T+N I L + SEA AL+ M++ G +P+ V++ +++G C G+
Sbjct: 179 VT-GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 294 DEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKL 353
D A + M++ +P Y T+ LC+ + A + KE KG PN T L
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 354 VTGLVGVSKTDDAKELIKQVKEK 376
++ L + DA L+ + E+
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIER 320
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 108/235 (45%), Gaps = 5/235 (2%)
Query: 117 NAVTAFTRMRDEFQITPSVKSLNALLFAALIAKD--YKEVSRIYLDFPKNYSIQPDVETY 174
N F + E + P+V SLN L+ AL D +I+L+ PK PD TY
Sbjct: 138 NLAFKFYKNMREIGLPPTVASLNVLI-KALCRNDGTVDAGLKIFLEMPKR-GCDPDSYTY 195
Query: 175 NTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE 234
T+I G + +EM P VT+++ I G K +E + L+ M+
Sbjct: 196 GTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKS 255
Query: 235 KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLD 294
K G+ P + TY+ + LCK R+ +A L + M++ G +PN V+++ LI G C E +
Sbjct: 256 K-GIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQ 314
Query: 295 EAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTT 349
EA ++ M +G KP++ Y + C F A E + G PN T
Sbjct: 315 EAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLT 369
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 158/349 (45%), Gaps = 17/349 (4%)
Query: 33 ALHLLKSETNPERILDICRAAS--LTPDFHLDRIALSVAISKLKDGNHFSTIDQFLRDLP 90
+ L+++E + E+ + + +A+ + D+ + + +L N F + +
Sbjct: 19 VIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLI---- 74
Query: 91 TSRPDLRNERFLSQSIVL-----YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAA 145
R + N +S+ I+L YG+ +++ F +M+D F PS K+ +L A
Sbjct: 75 -VRMKIEN-CVVSEDILLSICRGYGRVHRPFDSLRVFHKMKD-FDCDPSQKAYVTVL-AI 130
Query: 146 LIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAES-GSTSSVYSILSEMDRNSVRP 204
L+ ++ ++ + + + P V + N +IK+ + G+ + I EM + P
Sbjct: 131 LVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDP 190
Query: 205 NAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKAL 264
++ T+ I G + +E K+ M EK +P + TY I LC K EA
Sbjct: 191 DSYTYGTLISGLCRFGRIDEAKKLFTEMVEK-DCAPTVVTYTSLINGLCGSKNVDEAMRY 249
Query: 265 LQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCE 324
L+ M S G +PN ++S L+ G C +G +A ++F M RG +P Y TL LC+
Sbjct: 250 LEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCK 309
Query: 325 GGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
+ A E+ +G P+ K+++G +SK +A + ++
Sbjct: 310 EQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEM 358
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 136/301 (45%), Gaps = 19/301 (6%)
Query: 65 ALSVAISKL--KDGNHFSTIDQFLRDLP--TSRPDLRNERFLSQSIVLYGQARMLPNAVT 120
+L+V I L DG + + FL ++P PD L + +G+ + A
Sbjct: 158 SLNVLIKALCRNDGTVDAGLKIFL-EMPKRGCDPDSYTYGTLISGLCRFGR---IDEAKK 213
Query: 121 AFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKS 180
FT M ++ P+V + +L+ +K+ E R YL+ K+ I+P+V TY++++
Sbjct: 214 LFTEMVEK-DCAPTVVTYTSLINGLCGSKNVDEAMR-YLEEMKSKGIEPNVFTYSSLMDG 271
Query: 181 FAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSP 240
+ G + + M RPN VT++ I G E+K +E ++L M + G+ P
Sbjct: 272 LCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQ-GLKP 330
Query: 241 ALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFS-------HLIHGYCWEGNL 293
Y I C + + EA L MI GG PN ++++ ++ G C
Sbjct: 331 DAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-ANYP 389
Query: 294 DEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKL 353
A ++ M+ RG E +L LC+ G+F+ A ++ E + G +P+ T K L
Sbjct: 390 SRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLL 449
Query: 354 V 354
+
Sbjct: 450 I 450
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Query: 272 GRKPNWVSFSHLIHGYCW-EGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFES 330
G P S + LI C +G +D K+F +M KRG P+S Y TL LC G +
Sbjct: 151 GLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDE 210
Query: 331 AFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTE 379
A ++ E ++K P T L+ GL G D+A ++++K K E
Sbjct: 211 AKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIE 259
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 102/195 (52%), Gaps = 1/195 (0%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
+N ++P+V TY+++I G S +LS+M + PN VTFS I+ F + K
Sbjct: 280 ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL 339
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
+ K+ + M ++ + P + TY+ I C L R EAK +L+ MI PN V+++
Sbjct: 340 VKAEKLYEEMIKR-SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNT 398
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
LI+G+C +D+ ++F +M +RG + Y TL H + D ++A + K+ + G
Sbjct: 399 LINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 458
Query: 343 WVPNFTTMKKLVTGL 357
PN T L+ GL
Sbjct: 459 VHPNILTYNILLDGL 473
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 1/209 (0%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
QPD+ TY V+ + G T ++L++M+ + N V +S I+ + ++
Sbjct: 215 QPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALN 274
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
+ ME K G+ P + TY+ I LC R S+A LL MI PN V+FS LI +
Sbjct: 275 LFTEMENK-GVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAF 333
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
+G L +A+K++ +M KR P Y +L + C A ++ + + K +PN
Sbjct: 334 VKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNV 393
Query: 348 TTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
T L+ G + D EL +++ ++
Sbjct: 394 VTYNTLINGFCKAKRVDKGMELFREMSQR 422
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 3/246 (1%)
Query: 117 NAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNT 176
+A+ FT M ++ + P+V + ++L+ + + SR+ D + I P++ T++
Sbjct: 271 DALNLFTEMENK-GVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER-KINPNLVTFSA 328
Query: 177 VIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKY 236
+I +F + G + EM + S+ PN T+S+ I GF + E ++L++M K
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD 388
Query: 237 GMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEA 296
+ P + TYN I CK KR + L + M G N V+++ LIHG+ + D A
Sbjct: 389 CL-PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 447
Query: 297 KKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTG 356
+ VF M G P Y L LC+ G A + + P+ T ++ G
Sbjct: 448 QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 507
Query: 357 LVGVSK 362
+ K
Sbjct: 508 MCKAGK 513
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 7/220 (3%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
+PD+ T N+++ F S +++ +M +P+ VTF+ I G + K E
Sbjct: 145 EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVA 204
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
++ M ++ G P L TY + LCK T A LL M + + N V +S +I
Sbjct: 205 LIDRMVQR-GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
C + D+A +F +M+ +G +P Y +L LC G + A + + +++ PN
Sbjct: 264 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL 323
Query: 348 TTMKKLVTGLVGVSKTDDAKELIKQVKEK------FTESS 381
T L+ V K A++L +++ ++ FT SS
Sbjct: 324 VTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSS 363
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 112/238 (47%), Gaps = 14/238 (5%)
Query: 93 RPDLRNERFLSQSIVLYGQ----ARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIA 148
RP++ L + YG+ +R+L + + E +I P++ + +AL+ A +
Sbjct: 285 RPNVITYSSLISCLCNYGRWSDASRLLSDMI--------ERKINPNLVTFSALIDAFVKK 336
Query: 149 KDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVT 208
+ ++Y + K SI P++ TY+++I F +L M R PN VT
Sbjct: 337 GKLVKAEKLYEEMIKR-SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVT 395
Query: 209 FSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGM 268
++ I GF K+ ++ ++ + M ++ G+ TY I + + A+ + + M
Sbjct: 396 YNTLINGFCKAKRVDKGMELFREMSQR-GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 454
Query: 269 ISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGG 326
+S G PN ++++ L+ G C G L +A VF +++ +P+ Y + +C+ G
Sbjct: 455 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 1/211 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
I ++ TYN +I F S ++L +M + P+ VT ++ + GF + +
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
++ M E G P T+ I L + SEA AL+ M+ G +P+ V++ +++
Sbjct: 168 VALVDQMVE-MGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVN 226
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
G C G+ D A + M+ + Y T+ LC+ + A + E +KG P
Sbjct: 227 GLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 286
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
N T L++ L + DA L+ + E+
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIER 317
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 121/283 (42%), Gaps = 40/283 (14%)
Query: 99 ERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIY 158
+RF+ +S+V+ G A P + + F R R F+ + DY+EV R
Sbjct: 10 KRFVHRSLVVRGNAATFPLSFS-FCRRRA---------------FSGKTSYDYREVLRTG 53
Query: 159 LDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYS 218
L D+E + + + M ++ P+ + FS +
Sbjct: 54 L---------SDIELDDAI--------------GLFGVMAQSRPFPSIIEFSKLLSAIAK 90
Query: 219 EKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWV 278
KF+ V + ME G+S L TYN+ I C+ R S A ALL M+ G +P+ V
Sbjct: 91 MNKFDLVISFGEKME-ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIV 149
Query: 279 SFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKES 338
+ + L++G+C + +A + M + GYKP++ + TL H L A +
Sbjct: 150 TLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRM 209
Query: 339 MDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTESS 381
+ +G P+ T +V GL TD A L+ +++ E++
Sbjct: 210 VQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEAN 252
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 106/208 (50%), Gaps = 1/208 (0%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
+ D+ Y T+I+ F +G +L +M + + P+ V FS I+ F E K E +
Sbjct: 279 KADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEE 338
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
+ K M ++ G+SP TY I CK + +A +L M+S G PN +F+ LI+GY
Sbjct: 339 LHKEMIQR-GISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
C +D+ ++F M RG ++ Y TL CE G E A E+ +E + + P+
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDI 457
Query: 348 TTMKKLVTGLVGVSKTDDAKELIKQVKE 375
+ K L+ GL + + A E+ +++++
Sbjct: 458 VSYKILLDGLCDNGEPEKALEIFEKIEK 485
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 145/332 (43%), Gaps = 13/332 (3%)
Query: 46 ILDICRAASLTPDFHLDRIALSVAISKL----KDGNHFSTIDQFLRDLPTSRPDLRNERF 101
+LD+C+ L H + LS+ I+ K FS + + ++ PD
Sbjct: 91 VLDLCKQMELKGIAH-NLYTLSIMINCCCRCRKLSLAFSAMGKIIK--LGYEPDTVTFST 147
Query: 102 LSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDF 161
L + L G+ + A+ RM E P++ +LNAL+ + + + + +D
Sbjct: 148 LINGLCLEGR---VSEALELVDRMV-EMGHKPTLITLNALVNGLCLNGKVSD-AVLLIDR 202
Query: 162 PKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKK 221
QP+ TY V+K +SG T+ +L +M+ ++ +AV +S I+G +
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Query: 222 FEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFS 281
+ + ME K G + Y I C R + LL+ MI P+ V+FS
Sbjct: 263 LDNAFNLFNEMEIK-GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFS 321
Query: 282 HLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDK 341
LI + EG L EA+++ +M +RG P++ Y +L C+ + A + + K
Sbjct: 322 ALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381
Query: 342 GWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
G PN T L+ G + DD EL +++
Sbjct: 382 GCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 111/246 (45%), Gaps = 2/246 (0%)
Query: 130 QITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSS 189
+ITP V + +AL+ + +E ++ + + I PD TY ++I F +
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR-GISPDTVTYTSLIDGFCKENQLDK 370
Query: 190 VYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRI 249
+L M PN TF+ I G+ ++ ++ + M + G+ TYN I
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR-GVVADTVTYNTLI 429
Query: 250 LSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYK 309
C+L + AK L Q M+S +P+ VS+ L+ G C G ++A ++F ++K +
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Query: 310 PESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKEL 369
+ Y + H +C + A+++ KG P+ T ++ GL +A L
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLL 549
Query: 370 IKQVKE 375
++++E
Sbjct: 550 FRKMEE 555
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 1/209 (0%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
+PD T++T+I G S ++ M +P +T + + G K +
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
++ M E G P TY + +CK +T+ A LL+ M K + V +S +I G
Sbjct: 199 LIDRMVET-GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGL 257
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
C +G+LD A +F +M+ +G+K + Y TL C G ++ ++ ++ + + P+
Sbjct: 258 CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDV 317
Query: 348 TTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
L+ V K +A+EL K++ ++
Sbjct: 318 VAFSALIDCFVKEGKLREAEELHKEMIQR 346
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 93/184 (50%), Gaps = 1/184 (0%)
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
+ EM R+ RP + FS K+++ V + K ME K G++ L T ++ I
Sbjct: 59 LFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELK-GIAHNLYTLSIMINCC 117
Query: 253 CKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPES 312
C+ ++ S A + + +I G +P+ V+FS LI+G C EG + EA ++ M + G+KP
Sbjct: 118 CRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQ 372
L + LC G A + ++ G+ PN T ++ + +T A EL+++
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK 237
Query: 373 VKEK 376
++E+
Sbjct: 238 MEER 241
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 5/191 (2%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
+ D TYNT+I+ F E G + EM VRP+ V++ ++G + E
Sbjct: 417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE-- 474
Query: 226 GKVLKMME--EKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHL 283
K L++ E EK M + YN+ I +C + +A L + G KP+ +++ +
Sbjct: 475 -KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIM 533
Query: 284 IHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGW 343
I G C +G+L EA +F M++ G+ P Y L GD + ++ +E G+
Sbjct: 534 IGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGF 593
Query: 344 VPNFTTMKKLV 354
+ +T+K +V
Sbjct: 594 SVDASTVKMVV 604
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 116/263 (44%), Gaps = 8/263 (3%)
Query: 67 SVAISKLKDG----NHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAF 122
+V + L DG N + L DL S+ N R + I Y +A ++ + + F
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHML-DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 123 TRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFA 182
+M + +V + N L+ EV++ + ++PD+ +Y ++
Sbjct: 411 RKMSLRGVVADTV-TYNTLI-QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468
Query: 183 ESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPAL 242
++G I +++++ + + ++ I G + K ++ + + K G+ P +
Sbjct: 469 DNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK-GVKPDV 527
Query: 243 STYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFAD 302
TYN+ I LCK SEA L + M G PN +++ LI + EG+ ++ K+ +
Sbjct: 528 KTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE 587
Query: 303 MKKRGYKPESPCYFTLAHFLCEG 325
+K+ G+ ++ + L +G
Sbjct: 588 IKRCGFSVDASTVKMVVDMLSDG 610
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 107/210 (50%), Gaps = 1/210 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
I+P+V TY+++I G S +LS+M + PN VTF+ I+ F E KF E
Sbjct: 290 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 349
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
K+ M ++ + P + TYN + C R +AK + + M+S P+ V+++ LI
Sbjct: 350 EKLYDDMIKR-SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIK 408
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
G+C +++ ++F +M RG ++ Y TL L GD ++A ++ K+ + G P
Sbjct: 409 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 468
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
+ T L+ GL K + A E+ +++
Sbjct: 469 DIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 145/320 (45%), Gaps = 16/320 (5%)
Query: 62 DRIALSVAISKLKDGNHFSTIDQFLRDLPTS--RPDLRNERFLSQSIVLYGQ----ARML 115
D + + I L H +++ T RP++ L + YG+ +++L
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 116 PNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYN 175
+ + E +I P++ + NAL+ A + + E ++Y D K SI PD+ TYN
Sbjct: 319 SDMI--------EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR-SIDPDIFTYN 369
Query: 176 TVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEK 235
+++ F + M P+ VT++ I+GF K+ E+ ++ + M +
Sbjct: 370 SLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR 429
Query: 236 YGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDE 295
G+ TY I L A+ + + M+S G P+ +++S L+ G C G L++
Sbjct: 430 -GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 488
Query: 296 AKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVT 355
A +VF M+K K + Y T+ +C+ G + +++ KG PN T +++
Sbjct: 489 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 548
Query: 356 GLVGVSKTDDAKELIKQVKE 375
GL +A L+K++KE
Sbjct: 549 GLCSKRLLQEAYALLKKMKE 568
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 3/268 (1%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
Y + + +AV +M E P + L+ + E + +D Q
Sbjct: 165 YCHGKRISDAVALVDQMV-EMGYRPDTITFTTLIHGLFLHNKASEAVAL-VDRMVQRGCQ 222
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P++ TY V+ + G T ++L++M+ + + V F+ I+ + ++ +
Sbjct: 223 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 282
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
K ME K G+ P + TY+ I LC R S+A LL MI PN V+F+ LI +
Sbjct: 283 FKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 341
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
EG EA+K++ DM KR P+ Y +L + C + A ++ + + K P+
Sbjct: 342 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 401
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQVKEK 376
T L+ G + +D EL +++ +
Sbjct: 402 TYNTLIKGFCKSKRVEDGTELFREMSHR 429
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 110/244 (45%), Gaps = 2/244 (0%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
I P + + N+L+ D + ++ +F + PDV TYNT+IK F +S
Sbjct: 361 IDPDIFTYNSLV-NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 191 YSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRIL 250
+ EM + + VT++ I+G + + + KV K M G+ P + TY++ +
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLD 478
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
LC + +A + M K + ++ +I G C G +D+ +F + +G KP
Sbjct: 479 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 538
Query: 311 ESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELI 370
Y T+ LC + A+ + K+ + G +PN T L+ + + ELI
Sbjct: 539 NVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELI 598
Query: 371 KQVK 374
++++
Sbjct: 599 REMR 602
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 108/244 (44%), Gaps = 2/244 (0%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
PS+ N LL A K + V + + I + TYN +I F S +
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQR-LEIVHGLYTYNILINCFCRRSQISLALA 141
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
+L +M + P+ VT S+ + G+ K+ + ++ M E G P T+ I L
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE-MGYRPDTITFTTLIHGL 200
Query: 253 CKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPES 312
+ SEA AL+ M+ G +PN V++ +++G C G+ D A + M+ + +
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADV 260
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQ 372
+ T+ LC+ + A + KE KG PN T L++ L + DA +L+
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 373 VKEK 376
+ EK
Sbjct: 321 MIEK 324
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 96/202 (47%), Gaps = 1/202 (0%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
+P + T ++++ + S +++ +M RP+ +TF+ I G + K E
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
++ M ++ G P L TY V + LCK T A LL M + + + V F+ +I
Sbjct: 212 LVDRMVQR-GCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL 270
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
C ++D+A +F +M+ +G +P Y +L LC G + A ++ + ++K PN
Sbjct: 271 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 330
Query: 348 TTMKKLVTGLVGVSKTDDAKEL 369
T L+ V K +A++L
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKL 352
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 7/210 (3%)
Query: 174 YNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV---GKVLK 230
Y ++++ + M ++ P+ V F+ + KKF+ V G+ ++
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 231 MMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWE 290
+E +G L TYN+ I C+ + S A ALL M+ G +P+ V+ S L++GYC
Sbjct: 113 RLEIVHG----LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 291 GNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTM 350
+ +A + M + GY+P++ + TL H L A + + +G PN T
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 351 KKLVTGLVGVSKTDDAKELIKQVKEKFTES 380
+V GL TD A L+ +++ E+
Sbjct: 229 GVVVNGLCKRGDTDLALNLLNKMEAAKIEA 258
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 74/160 (46%), Gaps = 1/160 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
+ PD+ TY+ ++ +G + M ++ ++ + ++ IEG K ++
Sbjct: 465 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 524
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
+ + K G+ P + TYN I LC + EA ALL+ M G PN +++ LI
Sbjct: 525 WDLFCSLSLK-GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 583
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEG 325
+ +G+ + ++ +M+ + ++ +A+ L +G
Sbjct: 584 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG 623
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 123/279 (44%), Gaps = 13/279 (4%)
Query: 106 IVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLD----- 160
++ Y +P+A+ F R+ + + ++ LL + + Y++
Sbjct: 177 MITYTDLGFIPDAIQCF-RLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAG 235
Query: 161 FPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEK 220
FP N V +N ++ F + G+ S + E+ + S++P V+F+ I G+
Sbjct: 236 FPLN------VYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 221 KFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSF 280
+E G LK EK P + TY+ I +LCK + A L M G PN V F
Sbjct: 290 NLDE-GFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIF 348
Query: 281 SHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMD 340
+ LIHG+ G +D K+ + M +G +P+ Y TL + C+ GD +A I +
Sbjct: 349 TTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIR 408
Query: 341 KGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTE 379
+G P+ T L+ G + A E+ K++ + E
Sbjct: 409 RGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIE 447
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 115/241 (47%), Gaps = 7/241 (2%)
Query: 138 LNALLFAALIAKDYKE-----VSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
LN +F L+ K KE +++ + K S+QP V ++NT+I + + G+ +
Sbjct: 238 LNVYVFNILMNKFCKEGNISDAQKVFDEITKR-SLQPTVVSFNTLINGYCKVGNLDEGFR 296
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
+ +M+++ RP+ T+S I E K + + M ++ G+ P + I
Sbjct: 297 LKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKR-GLIPNDVIFTTLIHGH 355
Query: 253 CKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPES 312
+ K Q M+S G +P+ V ++ L++G+C G+L A+ + M +RG +P+
Sbjct: 356 SRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDK 415
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQ 372
Y TL C GGD E+A EI KE G + LV G+ + DA+ +++
Sbjct: 416 ITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALRE 475
Query: 373 V 373
+
Sbjct: 476 M 476
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 117/275 (42%), Gaps = 37/275 (13%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
+ P+V S N L+ + E R+ K+ + +PDV TY+ +I + +
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRT-RPDVFTYSALINALCKENKMDGA 329
Query: 191 YSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRIL 250
+ + EM + + PN V F+ I G + + + + + M K G+ P + YN +
Sbjct: 330 HGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSK-GLQPDIVLYNTLVN 388
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW--------------------- 289
CK A+ ++ GMI G +P+ ++++ LI G+C
Sbjct: 389 GFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIEL 448
Query: 290 --------------EGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEIT 335
EG + +A++ +M + G KP+ Y + C+ GD ++ F++
Sbjct: 449 DRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLL 508
Query: 336 KESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELI 370
KE G VP+ T L+ GL + + +A L+
Sbjct: 509 KEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLL 543
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 99/191 (51%), Gaps = 1/191 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
+QPD+ YNT++ F ++G + +I+ M R +RP+ +T++ I+GF E
Sbjct: 375 GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETA 434
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
++ K M++ G+ ++ + +CK R +A+ L+ M+ G KP+ V+++ ++
Sbjct: 435 LEIRKEMDQN-GIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMD 493
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
+C +G+ K+ +M+ G+ P Y L + LC+ G ++A + ++ G VP
Sbjct: 494 AFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVP 553
Query: 346 NFTTMKKLVTG 356
+ T L+ G
Sbjct: 554 DDITYNTLLEG 564
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 34/161 (21%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
++PD TY T+I F G + I EMD+N + + V FS + G E + +
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469
Query: 226 GKVLK---------------MMEEKY-------------------GMSPALSTYNVRILS 251
+ L+ MM + + G P++ TYNV +
Sbjct: 470 ERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNG 529
Query: 252 LCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGN 292
LCKL + A LL M++ G P+ ++++ L+ G+ N
Sbjct: 530 LCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHAN 570
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 106/238 (44%), Gaps = 19/238 (7%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
I PDV TYN++I SG S ++S M + + P+ TF+ I+ E + E
Sbjct: 216 GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEA 275
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
+ + M + + P + TY++ I LC R EA+ + M+S G P+ V++S LI+
Sbjct: 276 EEFYEEMIRR-SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILIN 334
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
GYC ++ K+F +M +RG + Y L C G A EI + + G P
Sbjct: 335 GYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHP 394
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIKQVKE------------------KFTESSDKWD 385
N T L+ GL K + A ++ +++ K E +D WD
Sbjct: 395 NIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWD 452
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 114/246 (46%), Gaps = 2/246 (0%)
Query: 130 QITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSS 189
+I P V + NAL+ A + E Y + + S+ PD+ TY+ +I
Sbjct: 251 EIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR-SLDPDIVTYSLLIYGLCMYSRLDE 309
Query: 190 VYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRI 249
+ M P+ VT+S I G+ KK E K+ M ++ G+ TY + I
Sbjct: 310 AEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR-GVVRNTVTYTILI 368
Query: 250 LSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYK 309
C+ + + A+ + + M+ G PN ++++ L+HG C G +++A + ADM+K G
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMD 428
Query: 310 PESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKEL 369
+ Y + +C+ G+ A++I +G +P+ T ++ GL +A L
Sbjct: 429 ADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADAL 488
Query: 370 IKQVKE 375
+++KE
Sbjct: 489 FRKMKE 494
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 108/240 (45%), Gaps = 8/240 (3%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYL-DFPKNYSIQPDVETYNTVIKSFAESGSTSSVY 191
PS+ + LL A K Y V IYL + + I ++ T N ++ F S
Sbjct: 79 PSIADFSRLLSAISKMKKYDVV--IYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLAL 136
Query: 192 SILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMS--PALSTYNVRI 249
S L +M + P+ VTF + + GF + + V L M ++ GM P + YN I
Sbjct: 137 SFLGKMIKLGHEPSIVTFGSLLNGF---CRGDRVYDALYMFDQMVGMGYKPNVVIYNTII 193
Query: 250 LSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYK 309
LCK K+ A LL M G P+ V+++ LI G C G +A ++ + M KR
Sbjct: 194 DGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIY 253
Query: 310 PESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKEL 369
P+ + L + G A E +E + + P+ T L+ GL S+ D+A+E+
Sbjct: 254 PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEM 313
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 1/209 (0%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
+P + T+ +++ F + +M +PN V ++ I+G K+ +
Sbjct: 148 EPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALD 207
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
+L ME K G+ P + TYN I LC R S+A ++ M P+ +F+ LI
Sbjct: 208 LLNRME-KDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDAC 266
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
EG + EA++ + +M +R P+ Y L + LC + A E+ + KG P+
Sbjct: 267 VKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDV 326
Query: 348 TTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
T L+ G K + +L ++ ++
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 97/216 (44%), Gaps = 2/216 (0%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
+ P + + + L++ + E ++ F + PDV TY+ +I + +S
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEEMF-GFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345
Query: 191 YSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRIL 250
+ EM + V N VT++ I+G+ K ++ + M G+ P + TYNV +
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFC-GVHPNIITYNVLLH 404
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
LC + +A +L M G + V+++ +I G C G + +A ++ + +G P
Sbjct: 405 GLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464
Query: 311 ESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPN 346
+ Y T+ L + G A + ++ + G +PN
Sbjct: 465 DIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 1/173 (0%)
Query: 204 PNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKA 263
P+ FS + KK++ V + + M+ G+ L T N+ + C+ + S A +
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQ-MLGIPHNLCTCNILLNCFCRCSQLSLALS 137
Query: 264 LLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLC 323
L MI G +P+ V+F L++G+C + +A +F M GYKP Y T+ LC
Sbjct: 138 FLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
Query: 324 EGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+ ++A ++ G P+ T L++GL + DA ++ + ++
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKR 250
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 5/149 (3%)
Query: 225 VGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLI 284
+GK++K+ G P++ T+ + C+ R +A + M+ G KPN V ++ +I
Sbjct: 139 LGKMIKL-----GHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTII 193
Query: 285 HGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWV 344
G C +D A + M+K G P+ Y +L LC G + A + +
Sbjct: 194 DGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIY 253
Query: 345 PNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
P+ T L+ V + +A+E +++
Sbjct: 254 PDVFTFNALIDACVKEGRVSEAEEFYEEM 282
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 119/253 (47%), Gaps = 5/253 (1%)
Query: 127 DEFQ---ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAE 183
DE Q + P + N+LL A E +R D N I+ DV +YNT++ + +
Sbjct: 328 DEMQRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICK 386
Query: 184 SGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALS 243
G + IL++M + PN V++S I+GF +F+E + M G++
Sbjct: 387 GGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR-YLGIALDRV 445
Query: 244 TYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADM 303
+YN + K+ R+ EA +L+ M S G K + V+++ L+ GY +G DE KKVF +M
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 304 KKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKT 363
K+ P Y TL +GG ++ A EI +E G + L+ L
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLV 565
Query: 364 DDAKELIKQVKEK 376
A LI ++ ++
Sbjct: 566 GSAVSLIDEMTKE 578
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 2/215 (0%)
Query: 163 KNYSIQPDVETYNTVIKSFAESG-STSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKK 221
K Y ++P++ TYN VI + + G V EM RN V+P+ +TF N++ S
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITF-NSLLAVCSRGG 353
Query: 222 FEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFS 281
E + L + + +YN + ++CK + A +L M PN VS+S
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 282 HLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDK 341
+I G+ G DEA +F +M+ G + Y TL + G E A +I +E
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 342 GWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
G + T L+ G K D+ K++ ++K +
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE 508
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 5/147 (3%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
I+ DV TYN ++ + + G V + +EM R V PN +T+S I+G+ ++E
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
++ + + G+ + Y+ I +LCK A +L+ M G PN V+++ +I
Sbjct: 534 MEIFREFKSA-GLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIID 592
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPES 312
+ +D + AD G P S
Sbjct: 593 AFGRSATMDRS----ADYSNGGSLPFS 615
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 4/168 (2%)
Query: 209 FSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRT-SEAKALLQG 267
FS I + EE V M+E YG+ P L TYN I + K +
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKE-YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 268 MISGGRKPNWVSFSHLIHGYCWEGNLDE-AKKVFADMKKRGYKPESPCYFTLAHFLCEGG 326
M G +P+ ++F+ L+ C G L E A+ +F +M R + + Y TL +C+GG
Sbjct: 330 MQRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGG 388
Query: 327 DFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVK 374
+ AFEI + K +PN + ++ G + D+A L +++
Sbjct: 389 QMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR 436
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 112/246 (45%), Gaps = 5/246 (2%)
Query: 143 FAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSV 202
FA L K ++ + ++ K+Y P VE+ N + S G EM R +
Sbjct: 178 FAHL--KKFRNATDTFMQM-KDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKI 234
Query: 203 RPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAK 262
PN T + + G+ K ++ ++L+ ME + G +YN I C+ S A
Sbjct: 235 SPNPYTLNMVMSGYCRSGKLDKGIELLQDME-RLGFRATDVSYNTLIAGHCEKGLLSSAL 293
Query: 263 ALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFL 322
L M G +PN V+F+ LIHG+C L EA KVF +MK P + Y TL +
Sbjct: 294 KLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGY 353
Query: 323 CEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV-KEKFTESS 381
+ GD E AF ++ + G + T L+ GL +KT A + +K++ KE +S
Sbjct: 354 SQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNS 413
Query: 382 DKWDEI 387
+ +
Sbjct: 414 STFSAL 419
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 120/265 (45%), Gaps = 3/265 (1%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
+ + NA F +M+D + P+V+S NA + ++L+ + +++ + + I
Sbjct: 178 FAHLKKFRNATDTFMQMKD-YGFLPTVESCNAYM-SSLLGQGRVDIALRFYREMRRCKIS 235
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P+ T N V+ + SG +L +M+R R V+++ I G + EK
Sbjct: 236 PNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAG-HCEKGLLSSALK 294
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
LK M K G+ P + T+N I C+ + EA + M + PN V+++ LI+GY
Sbjct: 295 LKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYS 354
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
+G+ + A + + DM G + + Y L LC+ A + KE + VPN +
Sbjct: 355 QQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSS 414
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQV 373
T L+ G D EL K +
Sbjct: 415 TFSALIMGQCVRKNADRGFELYKSM 439
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 2/217 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
+QP+V T+NT+I F + + EM +V PN VT++ I G+ + E
Sbjct: 303 GLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMA 362
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
+ + M G+ + TYN I LCK +T +A ++ + PN +FS LI
Sbjct: 363 FRFYEDMVCN-GIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIM 421
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
G C N D +++ M + G P + L C DF+ A ++ +E + +
Sbjct: 422 GQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPL 481
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIKQVK-EKFTESS 381
+ T+ ++ GL K K+L+++++ +KF + S
Sbjct: 482 DSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQES 518
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 112/246 (45%), Gaps = 5/246 (2%)
Query: 143 FAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSV 202
FA L K ++ + ++ K+Y P VE+ N + S G EM R +
Sbjct: 178 FAHL--KKFRNATDTFMQM-KDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKI 234
Query: 203 RPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAK 262
PN T + + G+ K ++ ++L+ ME + G +YN I C+ S A
Sbjct: 235 SPNPYTLNMVMSGYCRSGKLDKGIELLQDME-RLGFRATDVSYNTLIAGHCEKGLLSSAL 293
Query: 263 ALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFL 322
L M G +PN V+F+ LIHG+C L EA KVF +MK P + Y TL +
Sbjct: 294 KLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGY 353
Query: 323 CEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV-KEKFTESS 381
+ GD E AF ++ + G + T L+ GL +KT A + +K++ KE +S
Sbjct: 354 SQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNS 413
Query: 382 DKWDEI 387
+ +
Sbjct: 414 STFSAL 419
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 120/265 (45%), Gaps = 3/265 (1%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
+ + NA F +M+D + P+V+S NA + ++L+ + +++ + + I
Sbjct: 178 FAHLKKFRNATDTFMQMKD-YGFLPTVESCNAYM-SSLLGQGRVDIALRFYREMRRCKIS 235
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P+ T N V+ + SG +L +M+R R V+++ I G + EK
Sbjct: 236 PNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAG-HCEKGLLSSALK 294
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
LK M K G+ P + T+N I C+ + EA + M + PN V+++ LI+GY
Sbjct: 295 LKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYS 354
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
+G+ + A + + DM G + + Y L LC+ A + KE + VPN +
Sbjct: 355 QQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSS 414
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQV 373
T L+ G D EL K +
Sbjct: 415 TFSALIMGQCVRKNADRGFELYKSM 439
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 2/217 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
+QP+V T+NT+I F + + EM +V PN VT++ I G+ + E
Sbjct: 303 GLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMA 362
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
+ + M G+ + TYN I LCK +T +A ++ + PN +FS LI
Sbjct: 363 FRFYEDMVCN-GIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIM 421
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
G C N D +++ M + G P + L C DF+ A ++ +E + +
Sbjct: 422 GQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPL 481
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIKQVK-EKFTESS 381
+ T+ ++ GL K K+L+++++ +KF + S
Sbjct: 482 DSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQES 518
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 113/239 (47%), Gaps = 5/239 (2%)
Query: 130 QITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSS 189
++ P+V + +L+ + R+Y + I P + T+ T++ +G
Sbjct: 467 KLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK-GIAPSIYTFTTLLSGLFRAGLIRD 525
Query: 190 VYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRI 249
+ +EM +V+PN VT++ IEG+ E + + LK M EK G+ P +Y I
Sbjct: 526 AVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK-GIVPDTYSYRPLI 584
Query: 250 LSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYK 309
LC + SEAK + G+ G + N + ++ L+HG+C EG L+EA V +M +RG
Sbjct: 585 HGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVD 644
Query: 310 PESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKE 368
+ CY L + D + F + KE D+G P+ ++ SKT D KE
Sbjct: 645 LDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMID---AKSKTGDFKE 700
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 110/245 (44%), Gaps = 6/245 (2%)
Query: 128 EFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGST 187
+F ++P++ NAL+ + + + E ++ D ++P+ TY+ +I F G
Sbjct: 360 DFGVSPNLFVYNALIDSLCKGRKFHEAELLF-DRMGKIGLRPNDVTYSILIDMFCRRGKL 418
Query: 188 SSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYG--MSPALSTY 245
+ S L EM ++ + +++ I G KF ++ M E + P + TY
Sbjct: 419 DTALSFLGEMVDTGLKLSVYPYNSLING---HCKFGDISAAEGFMAEMINKKLEPTVVTY 475
Query: 246 NVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKK 305
+ C + ++A L M G P+ +F+ L+ G G + +A K+F +M +
Sbjct: 476 TSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE 535
Query: 306 RGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDD 365
KP Y + CE GD AFE KE +KG VP+ + + L+ GL + +
Sbjct: 536 WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASE 595
Query: 366 AKELI 370
AK +
Sbjct: 596 AKVFV 600
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 1/210 (0%)
Query: 167 IQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVG 226
++PDV TY T++ + ++ EM P+ S+ +EG K EE
Sbjct: 293 LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEAL 352
Query: 227 KVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHG 286
++K + + +G+SP L YN I SLCK ++ EA+ L M G +PN V++S LI
Sbjct: 353 NLVKRVVD-FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDM 411
Query: 287 YCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPN 346
+C G LD A +M G K Y +L + C+ GD +A E ++K P
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471
Query: 347 FTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
T L+ G K + A L ++ K
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGK 501
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 150 DYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTF 209
D+KE I+ D N P+ TY VI ++G + + S+M S PN VT+
Sbjct: 697 DFKEAFGIW-DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTY 755
Query: 210 SNAIEGFYS-----EKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKAL 264
++ +K E +LK G+ +TYN+ I C+ R EA L
Sbjct: 756 GCFLDILTKGEVDMQKAVELHNAILK------GLLANTATYNMLIRGFCRQGRIEEASEL 809
Query: 265 LQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCE 324
+ MI G P+ ++++ +I+ C ++ +A +++ M ++G +P+ Y TL H C
Sbjct: 810 ITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCV 869
Query: 325 GGDFESAFEITKESMDKGWVPNFTT 349
G+ A E+ E + +G +PN T
Sbjct: 870 AGEMGKATELRNEMLRQGLIPNNKT 894
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 113/283 (39%), Gaps = 37/283 (13%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
Y ++R + + V F M + + P V++L+ALL + + + ++ D + I+
Sbjct: 166 YVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMV-SVGIR 224
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
PDV Y VI+S E S +++ M+ N V ++ I+G ++K E +
Sbjct: 225 PDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGI 284
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLK---------------RTSEAKALLQGMISGGR 273
K + K + P + TY + LCK++ R S ++A + ++ G R
Sbjct: 285 KKDLAGK-DLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLR 343
Query: 274 K--------------------PNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESP 313
K PN ++ LI C EA+ +F M K G +P
Sbjct: 344 KRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDV 403
Query: 314 CYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTG 356
Y L C G ++A E +D G + L+ G
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING 446
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 5/175 (2%)
Query: 201 SVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE--KYGMSPALSTYNVRILSLCKLKRT 258
S+ P T S + G KF G +++ + G+ P + Y I SLC+LK
Sbjct: 187 SLLPEVRTLSALLHGLV---KFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDL 243
Query: 259 SEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTL 318
S AK ++ M + G N V ++ LI G C + + EA + D+ + KP+ Y TL
Sbjct: 244 SRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTL 303
Query: 319 AHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
+ LC+ +FE E+ E + + P+ + LV GL K ++A L+K+V
Sbjct: 304 VYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRV 358
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 97/236 (41%), Gaps = 5/236 (2%)
Query: 138 LNALLFAALIAKDYKEVSR-IYLDFPK---NYSIQPDVETYNTVIKSFAESGSTSSVYSI 193
L+ + + LI K R ++ K + ++PD Y ++I + +++G + I
Sbjct: 645 LDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI 704
Query: 194 LSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLC 253
M PN VT++ I G + F +VL + P TY + L
Sbjct: 705 WDLMINEGCVPNEVTYTAVINGL-CKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILT 763
Query: 254 KLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESP 313
K + + L I G N +++ LI G+C +G ++EA ++ M G P+
Sbjct: 764 KGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCI 823
Query: 314 CYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKEL 369
Y T+ + LC D + A E+ +KG P+ L+ G + A EL
Sbjct: 824 TYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATEL 879
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 108/253 (42%), Gaps = 4/253 (1%)
Query: 122 FTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSF 181
F + E I P S L+ + E +++++D + + + Y ++ F
Sbjct: 564 FLKEMTEKGIVPDTYSYRPLIHGLCLTGQASE-AKVFVDGLHKGNCELNEICYTGLLHGF 622
Query: 182 AESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPA 241
G S+ EM + V + V + I+G K + +LK M ++ G+ P
Sbjct: 623 CREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDR-GLKPD 681
Query: 242 LSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFA 301
Y I + K EA + MI+ G PN V+++ +I+G C G ++EA+ + +
Sbjct: 682 DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCS 741
Query: 302 DMKKRGYKPESPCYFTLAHFLCEGG-DFESAFEITKESMDKGWVPNFTTMKKLVTGLVGV 360
M+ P Y L +G D + A E+ ++ KG + N T L+ G
Sbjct: 742 KMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVEL-HNAILKGLLANTATYNMLIRGFCRQ 800
Query: 361 SKTDDAKELIKQV 373
+ ++A ELI ++
Sbjct: 801 GRIEEASELITRM 813
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 99/254 (38%), Gaps = 37/254 (14%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
I PS+ + LL A ++ +++ + + ++++P+ TYN +I+ + E G S
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE-WNVKPNRVTYNVMIEGYCEEGDMSKA 561
Query: 191 YSILSEM-------DRNSVRP----------------------------NAVTFSNAIEG 215
+ L EM D S RP N + ++ + G
Sbjct: 562 FEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHG 621
Query: 216 FYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKP 275
F E K EE V + M ++ G+ L Y V I K K LL+ M G KP
Sbjct: 622 FCREGKLEEALSVCQEMVQR-GVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKP 680
Query: 276 NWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEIT 335
+ V ++ +I G+ EA ++ M G P Y + + LC+ G A +
Sbjct: 681 DDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLC 740
Query: 336 KESMDKGWVPNFTT 349
+ VPN T
Sbjct: 741 SKMQPVSSVPNQVT 754
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 1/204 (0%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
K+ I P+V TY+++I +SG + L EMD + PN +TFS I+ + K
Sbjct: 75 KDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKL 134
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
+V V KMM + + P + TY+ I LC R EA +L MIS G PN V++S
Sbjct: 135 SKVDSVYKMMIQ-MSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYST 193
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
L +G+ +D+ K+ DM +RG + TL + G + A + G
Sbjct: 194 LANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNG 253
Query: 343 WVPNFTTMKKLVTGLVGVSKTDDA 366
+PN + ++ GL + + A
Sbjct: 254 LIPNIRSYNIVLAGLFANGEVEKA 277
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 1/211 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
I+PD+ T ++++ F S S + +M++ ++ + V + I+ +
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
+VLK M+++ G+SP + TY+ I LCK R ++A+ L M S PN ++FS LI
Sbjct: 68 LEVLKRMKDR-GISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALID 126
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
Y G L + V+ M + P Y +L + LC + A ++ + KG P
Sbjct: 127 AYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTP 186
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
N T L G S+ DD +L+ + ++
Sbjct: 187 NVVTYSTLANGFFKSSRVDDGIKLLDDMPQR 217
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 111/270 (41%), Gaps = 38/270 (14%)
Query: 113 RMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVE 172
R++ A+ RM+D I+P+V + ++L+ + + R L + I P+V
Sbjct: 62 RLVVPALEVLKRMKDR-GISPNVVTYSSLITGLCKSGRLADAER-RLHEMDSKKINPNVI 119
Query: 173 TYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMM 232
T++ +I ++A+ G S V S+ M + S+ PN T+S+ I G + +E K+L +M
Sbjct: 120 TFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLM 179
Query: 233 EEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGN 292
K G +P + TY+ K R + LL M G N VS + LI GY G
Sbjct: 180 ISK-GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGK 238
Query: 293 LDEAKKVFADMKKRGYKP-----------------------------------ESPCYFT 317
+D A VF M G P + Y
Sbjct: 239 IDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTI 298
Query: 318 LAHFLCEGGDFESAFEITKESMDKGWVPNF 347
+ H +C+ + A+++ + K P+F
Sbjct: 299 MIHGMCKACMVKEAYDLFYKLKFKRVEPDF 328
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 92/208 (44%), Gaps = 2/208 (0%)
Query: 119 VTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVI 178
V + +M + I P+V + ++L++ + E ++ LD + P+V TY+T+
Sbjct: 137 VDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKM-LDLMISKGCTPNVVTYSTLA 195
Query: 179 KSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGM 238
F +S +L +M + V N V+ + I+G++ K + V M G+
Sbjct: 196 NGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSN-GL 254
Query: 239 SPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKK 298
P + +YN+ + L +A + + M + ++++ +IHG C + EA
Sbjct: 255 IPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYD 314
Query: 299 VFADMKKRGYKPESPCYFTLAHFLCEGG 326
+F +K + +P+ Y + L G
Sbjct: 315 LFYKLKFKRVEPDFKAYTIMIAELNRAG 342
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%)
Query: 268 MISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGD 327
M+ G +P+ V+ S L++G+C ++ +A V M+K G K + L LC+
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 328 FESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
A E+ K D+G PN T L+TGL + DA+ + ++ K
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSK 112
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 114/264 (43%), Gaps = 3/264 (1%)
Query: 113 RMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVE 172
R L NA+ F M + I + N L+ + + + +R+ D K I P+V
Sbjct: 198 RDLNNALEVFYCMEKK-GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR-KIDPNVI 255
Query: 173 TYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMM 232
+ +I +F + G+ ++ EM R SV PN T+++ I GF + + +M
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 233 EEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGN 292
K G P + TYN I CK KR + L M G + +++ LIHGYC G
Sbjct: 316 VSK-GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Query: 293 LDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKK 352
L+ A+KVF M G P+ Y L LC G E A + ++ + T
Sbjct: 375 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Query: 353 LVTGLVGVSKTDDAKELIKQVKEK 376
++ GL K +A L + + K
Sbjct: 435 IIQGLCRTDKLKEAWCLFRSLTRK 458
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 126/284 (44%), Gaps = 4/284 (1%)
Query: 62 DRIALSVAISKLKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTA 121
D + + IS L + ++ + LRD+ + D N F + I + + L A
Sbjct: 218 DAVTYNTLISGLSNSGRWTDAARLLRDMVKRKID-PNVIFFTALIDTFVKEGNLLEARNL 276
Query: 122 FTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSF 181
+ M + P+V + N+L+ I + ++ D + PDV TYNT+I F
Sbjct: 277 YKEMIRR-SVVPNVFTYNSLINGFCIHGCLGDAKYMF-DLMVSKGCFPDVVTYNTLITGF 334
Query: 182 AESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPA 241
+S + EM + +A T++ I G+ K KV M + G+SP
Sbjct: 335 CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD-CGVSPD 393
Query: 242 LSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFA 301
+ TYN+ + LC + +A +++ + + ++++ +I G C L EA +F
Sbjct: 394 IVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFR 453
Query: 302 DMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
+ ++G KP++ Y T+ LC G A ++ + + G++P
Sbjct: 454 SLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 497
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 121/273 (44%), Gaps = 11/273 (4%)
Query: 130 QITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSS 189
+I P+V AL+ + + E +Y + + S+ P+V TYN++I F G
Sbjct: 249 KIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR-SVVPNVFTYNSLINGFCIHGCLGD 307
Query: 190 VYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRI 249
+ M P+ VT++ I GF K+ E+ K+ M + G+ TYN I
Sbjct: 308 AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ-GLVGDAFTYNTLI 366
Query: 250 LSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYK 309
C+ + + A+ + M+ G P+ V+++ L+ C G +++A + D++K
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 426
Query: 310 PESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKEL 369
+ Y + LC + A+ + + KG P+ +++GL +A +L
Sbjct: 427 VDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 486
Query: 370 IKQVKEK-FTESSDKWDE--------IEAELIK 393
+++KE F S +DE + AELIK
Sbjct: 487 CRRMKEDGFMPSERIYDETLRDHYTSLSAELIK 519
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 120/293 (40%), Gaps = 40/293 (13%)
Query: 117 NAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFP-KNYSIQPDVETYN 175
+A + F M I PS+ +L +IAK K IYL +N I D+ ++
Sbjct: 62 DAFSLFCEMLQSRPI-PSIVDFTRVL--TVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 176 TVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEK 235
+I F S ++L +M + RP+ VT + + GF +F+E ++ M+
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD-G 177
Query: 236 YGMSPALSTYNVRILSLCKLK-----------------------------------RTSE 260
+G P + YN I LCK + R ++
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 261 AKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAH 320
A LL+ M+ PN + F+ LI + EGNL EA+ ++ +M +R P Y +L +
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 321 FLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
C G A + + KG P+ T L+TG + +D +L ++
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 350
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 87/186 (46%), Gaps = 1/186 (0%)
Query: 191 YSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRIL 250
+S+ EM ++ P+ V F+ + KF+ V + ME G+S L ++ + I
Sbjct: 64 FSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMEN-LGISHDLYSFTILIH 122
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
C+ R S A ALL M+ G +P+ V+ L++G+C EA + M G+ P
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 182
Query: 311 ESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELI 370
Y T+ + LC+ D +A E+ KG + T L++GL + DA L+
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Query: 371 KQVKEK 376
+ + ++
Sbjct: 243 RDMVKR 248
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 122/252 (48%), Gaps = 5/252 (1%)
Query: 126 RDEF---QITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFA 182
RDE + P+ + N L+ L ++ E + I + + I D TYN +I +
Sbjct: 350 RDEMVKQGMVPTFYTYNTLIHG-LFMENKIEAAEILIREIREKGIVLDSVTYNILINGYC 408
Query: 183 ESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPAL 242
+ G +++ EM + ++P T+++ I + K E ++ + + K GM P L
Sbjct: 409 QHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGK-GMKPDL 467
Query: 243 STYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFAD 302
N + C + A +LL+ M P+ V+++ L+ G C EG +EA+++ +
Sbjct: 468 VMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGE 527
Query: 303 MKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSK 362
MK+RG KP+ Y TL + GD + AF + E + G+ P T L+ GL +
Sbjct: 528 MKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQE 587
Query: 363 TDDAKELIKQVK 374
+ A+EL++++K
Sbjct: 588 GELAEELLREMK 599
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 141/336 (41%), Gaps = 62/336 (18%)
Query: 58 DFHLDRIALSVAISKLKDGNHFSTIDQFLRDLPTSRPD----------LRNERFLSQSIV 107
DF +A++V ISKL + Q L+++ TSR + L ++R ++S +
Sbjct: 101 DFQTQCLAIAV-ISKLSSP---KPVTQLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTI 156
Query: 108 LYG-------QARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLD 160
L+ Q RM+ A+ F M+++
Sbjct: 157 LFDLLVRCCCQLRMVDEAIECFYLMKEK-------------------------------- 184
Query: 161 FPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEK 220
P ET N ++ + + + ++M R ++ N TF+ I E
Sbjct: 185 -----GFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEG 239
Query: 221 KFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSF 280
K ++ L +M E +G+ P + TYN + R A+ ++ M S G +P+ ++
Sbjct: 240 KLKKAKGFLGIM-EVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTY 298
Query: 281 SHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMD 340
+ ++ C EG A +V +MK+ G P+S Y L GD E AF E +
Sbjct: 299 NPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVK 355
Query: 341 KGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+G VP F T L+ GL +K + A+ LI++++EK
Sbjct: 356 QGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK 391
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 117/256 (45%), Gaps = 11/256 (4%)
Query: 121 AFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKS 180
F + + F I P++ + N L+ + E +R+ + K+ QPD++TYN ++
Sbjct: 246 GFLGIMEVFGIKPTIVTYNTLV-QGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSW 304
Query: 181 FAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSP 240
G S V L EM + P++V+++ I G + E M K GM P
Sbjct: 305 MCNEGRASEV---LREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMV-KQGMVP 360
Query: 241 ALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVF 300
TYN I L + A+ L++ + G + V+++ LI+GYC G +AKK F
Sbjct: 361 TFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHG---DAKKAF 417
Query: 301 A---DMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGL 357
A +M G +P Y +L + LC A E+ ++ + KG P+ M L+ G
Sbjct: 418 ALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGH 477
Query: 358 VGVSKTDDAKELIKQV 373
+ D A L+K++
Sbjct: 478 CAIGNMDRAFSLLKEM 493
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 106/210 (50%), Gaps = 1/210 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
I+P+V TY+++I G S +LS+M + PN VTF+ I+ F E KF E
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
K+ M ++ + P + TYN I C R +AK + + M+S P+ +++ LI
Sbjct: 275 EKLHDDMIKR-SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 333
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
G+C +++ ++F +M RG ++ Y TL L GD ++A ++ K+ + G P
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
+ T L+ GL K + A E+ +++
Sbjct: 394 DIMTYSILLDGLCNNGKLEKALEVFDYMQK 423
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 118/268 (44%), Gaps = 3/268 (1%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
Y + + +AV +M E P + L+ + E + +D Q
Sbjct: 90 YCHGKRISDAVALVDQMV-EMGYRPDTITFTTLIHGLFLHNKASEAVAL-VDRMVQRGCQ 147
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P++ TY V+ + G +++L++M+ + + V F+ I+ + ++ +
Sbjct: 148 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 207
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
K ME K G+ P + TY+ I LC R S+A LL MI PN V+F+ LI +
Sbjct: 208 FKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 266
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
EG EA+K+ DM KR P+ Y +L + C + A ++ + + K P+
Sbjct: 267 KEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLD 326
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQVKEK 376
T L+ G + +D EL +++ +
Sbjct: 327 TYNTLIKGFCKSKRVEDGTELFREMSHR 354
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 144/320 (45%), Gaps = 16/320 (5%)
Query: 62 DRIALSVAISKLKDGNHFSTIDQFLRDLPTS--RPDLRNERFLSQSIVLYGQ----ARML 115
D + + I L H +++ T RP++ L + YG+ +++L
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 116 PNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYN 175
+ + E +I P++ + NAL+ A + + E +++ D K SI PD+ TYN
Sbjct: 244 SDMI--------EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR-SIDPDIFTYN 294
Query: 176 TVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEK 235
++I F + M P+ T++ I+GF K+ E+ ++ + M +
Sbjct: 295 SLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR 354
Query: 236 YGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDE 295
G+ TY I L A+ + + M+S G P+ +++S L+ G C G L++
Sbjct: 355 -GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 413
Query: 296 AKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVT 355
A +VF M+K K + Y T+ +C+ G + +++ KG PN T +++
Sbjct: 414 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 473
Query: 356 GLVGVSKTDDAKELIKQVKE 375
GL +A L+K++KE
Sbjct: 474 GLCSKRLLQEAYALLKKMKE 493
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 110/244 (45%), Gaps = 2/244 (0%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
PS+ N LL A K + V + + I ++ TYN +I F S +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQR-LGISHNLYTYNILINCFCRRSQISLALA 66
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
+L +M + P+ VT S+ + G+ K+ + ++ M E G P T+ I L
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE-MGYRPDTITFTTLIHGL 125
Query: 253 CKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPES 312
+ SEA AL+ M+ G +PN V++ +++G C G++D A + M+ + +
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQ 372
+ T+ LC+ + A + KE KG PN T L++ L + DA +L+
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Query: 373 VKEK 376
+ EK
Sbjct: 246 MIEK 249
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 111/244 (45%), Gaps = 2/244 (0%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
I P + + N+L+ D + ++ +F + PD++TYNT+IK F +S
Sbjct: 286 IDPDIFTYNSLI-NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 344
Query: 191 YSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRIL 250
+ EM + + VT++ I+G + + + KV K M G+ P + TY++ +
Sbjct: 345 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLD 403
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
LC + +A + M K + ++ +I G C G +D+ +F + +G KP
Sbjct: 404 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 463
Query: 311 ESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELI 370
Y T+ LC + A+ + K+ + G +P+ T L+ + + ELI
Sbjct: 464 NVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELI 523
Query: 371 KQVK 374
++++
Sbjct: 524 REMR 527
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 1/202 (0%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
+P + T ++++ + S +++ +M RP+ +TF+ I G + K E
Sbjct: 77 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 136
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
++ M ++ G P L TY V + LCK A LL M + + + V F+ +I
Sbjct: 137 LVDRMVQR-GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 195
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
C ++D+A +F +M+ +G +P Y +L LC G + A ++ + ++K PN
Sbjct: 196 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 255
Query: 348 TTMKKLVTGLVGVSKTDDAKEL 369
T L+ V K +A++L
Sbjct: 256 VTFNALIDAFVKEGKFVEAEKL 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 74/160 (46%), Gaps = 1/160 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
+ PD+ TY+ ++ +G + M ++ ++ + ++ IEG K ++
Sbjct: 390 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 449
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
+ + K G+ P + TYN I LC + EA ALL+ M G P+ +++ LI
Sbjct: 450 WDLFCSLSLK-GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIR 508
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEG 325
+ +G+ + ++ +M+ + ++ +A+ L +G
Sbjct: 509 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG 548
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 129/281 (45%), Gaps = 4/281 (1%)
Query: 99 ERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIY 158
+R+ + I YG A + +V F M+ + I+PSV + N+LL L ++
Sbjct: 138 DRYFNSLIRSYGNAGLFQESVKLFQTMK-QMGISPSVLTFNSLLSILLKRGRTGMAHDLF 196
Query: 159 LDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYS 218
+ + Y + PD T+NT+I F ++ + I +M+ P+ VT++ I+G
Sbjct: 197 DEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCR 256
Query: 219 EKKFEEVGKVLK-MMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNW 277
K + VL M+++ + P + +Y + C + EA + M+S G KPN
Sbjct: 257 AGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNA 316
Query: 278 VSFSHLIHGYCWEGNLDEAKKVF--ADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEIT 335
V+++ LI G DE K + + + P++ + L C+ G ++A ++
Sbjct: 317 VTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVF 376
Query: 336 KESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+E ++ P+ + L+ L ++ D A+ L ++ EK
Sbjct: 377 QEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEK 417
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 114/276 (41%), Gaps = 11/276 (3%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYS-I 167
Y + + AV F M + P+ + N L+ A Y E+ I + ++
Sbjct: 291 YCMKQEIDEAVLVFHDMLSR-GLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTF 349
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
PD T+N +IK+ ++G + + EM + P++ ++S I +F+
Sbjct: 350 APDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAET 409
Query: 228 VLKMMEEKYGM------SPALSTYNVRILSLCKLKRTSEA-KALLQGMISGGRKPNWVSF 280
+ + EK + P + YN LC +T +A K Q M G + P S+
Sbjct: 410 LFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPP--SY 467
Query: 281 SHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMD 340
LI G+C EG A ++ M +R + P+ Y L L + G+ A + + +
Sbjct: 468 KTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLR 527
Query: 341 KGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
++P TT ++ L +++ L+ + EK
Sbjct: 528 SSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEK 563
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 139/321 (43%), Gaps = 11/321 (3%)
Query: 39 SETNPERILDICRAASLTPDFHLDRIALSVAISKLKDGNHFSTIDQFLRDLPT--SRPDL 96
S +N R+L++ L PD ++ +A+ L + +++L S PD
Sbjct: 139 SISNVHRVLNLMVNNGLEPD----QVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDT 194
Query: 97 RNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSR 156
FL + + + + L MRD+F + P + S L+ +K+ +E
Sbjct: 195 YTYNFLLKHLC---KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMY 251
Query: 157 IYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGF 216
+ N +PD YNT++K F S + +M V P+ +T++ I G
Sbjct: 252 LVSKL-GNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGL 310
Query: 217 YSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPN 276
+ EE LK M + G P +TY + +C+ + A +LL+ M + G PN
Sbjct: 311 SKAGRVEEARMYLKTMVDA-GYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPN 369
Query: 277 WVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITK 336
+++ L+HG C +D+ +++ MK G K ES Y TL L + G A+E+
Sbjct: 370 DCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFD 429
Query: 337 ESMDKGWVPNFTTMKKLVTGL 357
++D + + + L T L
Sbjct: 430 YAVDSKSLSDASAYSTLETTL 450
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 2/207 (0%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEM-DRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
PD TYN ++K + VY + EM D V+P+ V+F+ I+ + K E
Sbjct: 192 PDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMY 251
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
++ + G P YN + C L + SEA + + M G +P+ ++++ LI G
Sbjct: 252 LVSKLGNA-GFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGL 310
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
G ++EA+ M GY+P++ Y +L + +C G+ A + +E +G PN
Sbjct: 311 SKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPND 370
Query: 348 TTMKKLVTGLVGVSKTDDAKELIKQVK 374
T L+ GL D EL + +K
Sbjct: 371 CTYNTLLHGLCKARLMDKGMELYEMMK 397
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 113/260 (43%), Gaps = 2/260 (0%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
P + N LL KD V + ++ ++PD+ ++ +I + S +
Sbjct: 192 PDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMY 251
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
++S++ +P+ ++ ++GF + K E V K M+E+ G+ P TYN I L
Sbjct: 252 LVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEE-GVEPDQITYNTLIFGL 310
Query: 253 CKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPES 312
K R EA+ L+ M+ G +P+ +++ L++G C +G A + +M+ RG P
Sbjct: 311 SKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPND 370
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIK- 371
Y TL H LC+ + E+ + G LV LV K +A E+
Sbjct: 371 CTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDY 430
Query: 372 QVKEKFTESSDKWDEIEAEL 391
V K + + +E L
Sbjct: 431 AVDSKSLSDASAYSTLETTL 450
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 129/286 (45%), Gaps = 4/286 (1%)
Query: 100 RFLSQSIVLYGQARMLPNAVTAFTR-MRDEFQITPSVKSLNALLFAALIAKDYKEVSRIY 158
+F + + YG ++ + V F ++ + P + LL A A D +S ++
Sbjct: 86 KFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPD-SSISNVH 144
Query: 159 --LDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGF 216
L+ N ++PD T + ++S E+G ++ E+ P+ T++ ++
Sbjct: 145 RVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHL 204
Query: 217 YSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPN 276
K V + + M + + + P L ++ + I ++C K EA L+ + + G KP+
Sbjct: 205 CKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPD 264
Query: 277 WVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITK 336
++ ++ G+C EA V+ MK+ G +P+ Y TL L + G E A K
Sbjct: 265 CFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLK 324
Query: 337 ESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTESSD 382
+D G+ P+ T L+ G+ ++ A L+++++ + +D
Sbjct: 325 TMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPND 370
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 1/211 (0%)
Query: 159 LDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYS 218
+ K + + P++ TY+ +I + ++G+ Y + E+ + PN V F ++GF
Sbjct: 257 FELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCK 316
Query: 219 EKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWV 278
++ + M K+G+ P L YN I CK EA LL M S P+
Sbjct: 317 ARELVTARSLFVHMV-KFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVF 375
Query: 279 SFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKES 338
+++ LI+G C E + EA ++F MK P S Y +L H C+ + E A ++ E
Sbjct: 376 TYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEM 435
Query: 339 MDKGWVPNFTTMKKLVTGLVGVSKTDDAKEL 369
G PN T L+ G V A L
Sbjct: 436 TASGVEPNIITFSTLIDGYCNVRDIKAAMGL 466
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 110/230 (47%), Gaps = 6/230 (2%)
Query: 130 QITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSS 189
++ P+V L+ A++ +++ K + + P++ YN +I +SG+
Sbjct: 299 ELLPNVVVFGTLVDGFCKARELVTARSLFVHMVK-FGVDPNLYVYNCLIHGHCKSGNMLE 357
Query: 190 VYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRI 249
+LSEM+ ++ P+ T++ I G E + E ++ + M+ + + P+ +TYN I
Sbjct: 358 AVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNE-RIFPSSATYNSLI 416
Query: 250 LSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYK 309
CK +A L M + G +PN ++FS LI GYC ++ A ++ +M +G
Sbjct: 417 HGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIV 476
Query: 310 PESPCYFTL--AHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGL 357
P+ Y L AHF + + + A + + ++ G PN T LV G
Sbjct: 477 PDVVTYTALIDAHF--KEANMKEALRLYSDMLEAGIHPNDHTFACLVDGF 524
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 2/220 (0%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
PDV Y + + + G S +L EM ++PN ++ I + K EE K+
Sbjct: 197 PDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKM 256
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
++M+ K+G+ P L TY+ I CK +A L + ++ PN V F L+ G+C
Sbjct: 257 FELMK-KHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFC 315
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
L A+ +F M K G P Y L H C+ G+ A + E P+
Sbjct: 316 KARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVF 375
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQVK-EKFTESSDKWDEI 387
T L+ GL + +A L +++K E+ SS ++ +
Sbjct: 376 TYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSL 415
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 110/242 (45%), Gaps = 21/242 (8%)
Query: 114 MLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVET 173
+LPN T ++ M D + T +V+ L L+A+ + P+V
Sbjct: 265 VLPNLYT-YSAMIDGYCKTGNVRQAYGLYKEILVAE-----------------LLPNVVV 306
Query: 174 YNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFY-SEKKFEEVGKVLKMM 232
+ T++ F ++ + S+ M + V PN ++ I G S E VG + +M
Sbjct: 307 FGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM- 365
Query: 233 EEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGN 292
E +SP + TY + I LC + +EA L Q M + P+ +++ LIHGYC E N
Sbjct: 366 -ESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYN 424
Query: 293 LDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKK 352
+++A + ++M G +P + TL C D ++A + E KG VP+ T
Sbjct: 425 MEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTA 484
Query: 353 LV 354
L+
Sbjct: 485 LI 486
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 93/236 (39%), Gaps = 38/236 (16%)
Query: 118 AVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTV 177
AV + M + ++P V + L+ I E +R++ KN I P TYN++
Sbjct: 358 AVGLLSEM-ESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKM-KNERIFPSSATYNSL 415
Query: 178 IKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYG 237
I + + + + SEM + V PN +TFS I+G+ + + + + M K G
Sbjct: 416 IHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIK-G 474
Query: 238 MSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPN--------------------- 276
+ P + TY I + K EA L M+ G PN
Sbjct: 475 IVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAI 534
Query: 277 ------------W--VSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTL 318
W V F+ LI G C G + A + F+DM+ G P+ Y ++
Sbjct: 535 DFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSM 590
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 142/314 (45%), Gaps = 21/314 (6%)
Query: 70 ISKLKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEF 129
I KL++ + +D LRD +P+ R L Q+ + R + A +M+ +
Sbjct: 437 IGKLEESSRL--LDMMLRD-EMLQPNDRTCNILVQA---WCNQRKIEEAWNIVYKMQS-Y 489
Query: 130 QITPSVKSLNALLFAALIAKDYKEVSRIY----LDFPK--NYSIQPDVETYNTVIKSFAE 183
+ P V + N L AK Y + + P+ + ++P+V T T++ + E
Sbjct: 490 GVKPDVVTFNTL------AKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCE 543
Query: 184 SGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALS 243
G M V PN F++ I+GF + + VG+V+ +MEE +G+ P +
Sbjct: 544 EGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEE-FGVKPDVV 602
Query: 244 TYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADM 303
T++ + + + + + M+ GG P+ +FS L GY G ++A+++ M
Sbjct: 603 TFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQM 662
Query: 304 KKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMD-KGWVPNFTTMKKLVTGLVGVSK 362
+K G +P Y + C G+ + A ++ K+ G PN TT + L+ G +
Sbjct: 663 RKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQ 722
Query: 363 TDDAKELIKQVKEK 376
A+EL+K ++ K
Sbjct: 723 PWKAEELLKDMEGK 736
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 126/286 (44%), Gaps = 6/286 (2%)
Query: 91 TSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKD 150
T+ D+R+ L ++ G+ + A + F + +E PS+ + L+ A K
Sbjct: 314 TTCGDVRSRTKLMNGLIERGRPQ---EAHSIFNTLIEEGH-KPSLITYTTLVTALTRQKH 369
Query: 151 YKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFS 210
+ + + KN ++PD +N +I + +ESG+ I +M + +P A TF+
Sbjct: 370 FHSLLSLISKVEKN-GLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFN 428
Query: 211 NAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMIS 270
I+G+ K EE ++L MM + P T N+ + + C ++ EA ++ M S
Sbjct: 429 TLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQS 488
Query: 271 GGRKPNWVSFSHLIHGYCWEGNLDEAKK-VFADMKKRGYKPESPCYFTLAHFLCEGGDFE 329
G KP+ V+F+ L Y G+ A+ + M KP T+ + CE G E
Sbjct: 489 YGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKME 548
Query: 330 SAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
A + G PN L+ G + ++ D E++ ++E
Sbjct: 549 EALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEE 594
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 106/240 (44%), Gaps = 36/240 (15%)
Query: 167 IQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVG 226
I P+ TYNT+I F+ G +L+EM + PN VTF+ I+G SE F+E
Sbjct: 334 IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEAL 393
Query: 227 KVLKMMEEKYGMSPALSTYNVRILSLCK-------------LKRTS-------------- 259
K+ MME K G++P+ +Y V + LCK +KR
Sbjct: 394 KMFYMMEAK-GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDG 452
Query: 260 --------EAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPE 311
EA LL M G P+ V++S LI+G+C G AK++ + + G P
Sbjct: 453 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPN 512
Query: 312 SPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIK 371
Y TL + C G + A I + + +G + T LVT L K +A+E ++
Sbjct: 513 GIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 572
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 1/212 (0%)
Query: 165 YSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEE 224
Y P V T N ++ S +SG SV+S L EM + + P+ TF+ I +E FE+
Sbjct: 192 YGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEK 251
Query: 225 VGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLI 284
+++ ME K G +P + TYN + CK R A LL M S G + +++ LI
Sbjct: 252 SSYLMQKME-KSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLI 310
Query: 285 HGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWV 344
H C + + + DM+KR P Y TL + G A ++ E + G
Sbjct: 311 HDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLS 370
Query: 345 PNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
PN T L+ G + +A ++ ++ K
Sbjct: 371 PNHVTFNALIDGHISEGNFKEALKMFYMMEAK 402
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 105/241 (43%), Gaps = 2/241 (0%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
P++ + N +L +K + LD K+ + DV TYN +I S + Y
Sbjct: 266 PTIVTYNTVLHWYCKKGRFKAAIEL-LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL 324
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
+L +M + + PN VT++ I GF +E K ++L M +G+SP T+N I
Sbjct: 325 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLS-FGLSPNHVTFNALIDGH 383
Query: 253 CKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPES 312
EA + M + G P+ VS+ L+ G C D A+ + MK+ G
Sbjct: 384 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 443
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQ 372
Y + LC+ G + A + E G P+ T L+ G V + AKE++ +
Sbjct: 444 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 503
Query: 373 V 373
+
Sbjct: 504 I 504
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 132/306 (43%), Gaps = 40/306 (13%)
Query: 106 IVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRI-YLDFPKN 164
I +Y + M+ +++ F R+ + PSV + NA+L + + K ++VS +L
Sbjct: 170 IRVYLREGMIQDSLEIF-RLMGLYGFNPSVYTCNAILGS--VVKSGEDVSVWSFLKEMLK 226
Query: 165 YSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEE 224
I PDV T+N +I GS ++ +M+++ P VT++ + + + +F+
Sbjct: 227 RKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKA 286
Query: 225 VGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSE------------------------ 260
++L M+ K G+ + TYN+ I LC+ R ++
Sbjct: 287 AIELLDHMKSK-GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 345
Query: 261 -----------AKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYK 309
A LL M+S G PN V+F+ LI G+ EGN EA K+F M+ +G
Sbjct: 346 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 405
Query: 310 PESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKEL 369
P Y L LC+ +F+ A G T ++ GL D+A L
Sbjct: 406 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 465
Query: 370 IKQVKE 375
+ ++ +
Sbjct: 466 LNEMSK 471
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
I PD+ TY+ +I F + G + I+ + R + PN + +S I +E
Sbjct: 473 GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEA 532
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
++ + M + G + T+NV + SLCK + +EA+ ++ M S G PN VSF LI+
Sbjct: 533 IRIYEAMILE-GHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLIN 591
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESA 331
GY G +A VF +M K G+ P Y +L LC+GG A
Sbjct: 592 GYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA 637
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 98/228 (42%), Gaps = 2/228 (0%)
Query: 129 FQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTS 188
F ++P+ + NAL+ + ++KE +++ + P +Y ++ ++
Sbjct: 367 FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAK-GLTPSEVSYGVLLDGLCKNAEFD 425
Query: 189 SVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVR 248
M RN V +T++ I+G +E +L M K G+ P + TY+
Sbjct: 426 LARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS-KDGIDPDIVTYSAL 484
Query: 249 ILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGY 308
I CK+ R AK ++ + G PN + +S LI+ C G L EA +++ M G+
Sbjct: 485 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGH 544
Query: 309 KPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTG 356
+ + L LC+ G A E + G +PN + L+ G
Sbjct: 545 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLING 592
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 107/249 (42%), Gaps = 2/249 (0%)
Query: 125 MRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAES 184
M + +TPS S LL ++ Y+ +N + TY +I ++
Sbjct: 398 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI-TYTGMIDGLCKN 456
Query: 185 GSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALST 244
G +L+EM ++ + P+ VT+S I GF +F+ +++ + + G+SP
Sbjct: 457 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY-RVGLSPNGII 515
Query: 245 YNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMK 304
Y+ I + C++ EA + + MI G + +F+ L+ C G + EA++ M
Sbjct: 516 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 575
Query: 305 KRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTD 364
G P + + L + G+ AF + E G P F T L+ GL
Sbjct: 576 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 635
Query: 365 DAKELIKQV 373
+A++ +K +
Sbjct: 636 EAEKFLKSL 644
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 2/186 (1%)
Query: 173 TYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMM 232
T+N ++ S ++G + + M + + PN V+F I G+ + + + V M
Sbjct: 550 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 609
Query: 233 EEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGN 292
K G P TY + LCK EA+ L+ + + + V ++ L+ C GN
Sbjct: 610 T-KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGN 668
Query: 293 LDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWV-PNFTTMK 351
L +A +F +M +R P+S Y +L LC G A KE+ +G V PN
Sbjct: 669 LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 728
Query: 352 KLVTGL 357
V G+
Sbjct: 729 CFVDGM 734
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE--KYGMSPALSTYNVRIL 250
+L EM + + P + + I G + ++ + EE + + P + +
Sbjct: 921 VLHEMSKQGISPESRKYIGLINGLC---RVGDIKTAFVVKEEMIAHKICPPNVAESAMVR 977
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
+L K + EA LL+ M+ P SF+ L+H C GN+ EA ++ M G K
Sbjct: 978 ALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKL 1037
Query: 311 ESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLV 358
+ Y L LC GD AFE+ +E G++ N TT K L+ GL+
Sbjct: 1038 DLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLL 1085
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 94/243 (38%), Gaps = 36/243 (14%)
Query: 164 NYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFE 223
N PD+ T N +I ++ G +L EM + PN T++ + G YS++K
Sbjct: 752 NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHG-YSKRKDV 810
Query: 224 EVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHL 283
+L G+ P T + +L +C+ +L+ I G + + +F+ L
Sbjct: 811 STSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNML 870
Query: 284 IHGYCWEGNLD-----------------------------------EAKKVFADMKKRGY 308
I C G ++ E++ V +M K+G
Sbjct: 871 ISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGI 930
Query: 309 KPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKE 368
PES Y L + LC GD ++AF + +E + P +V L K D+A
Sbjct: 931 SPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATL 990
Query: 369 LIK 371
L++
Sbjct: 991 LLR 993
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 91/199 (45%), Gaps = 2/199 (1%)
Query: 184 SGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALS 243
SG +S V+ L R N + I + E ++ ++ ++M YG +P++
Sbjct: 142 SGKSSFVFGALMTTYR-LCNSNPSVYDILIRVYLREGMIQDSLEIFRLMG-LYGFNPSVY 199
Query: 244 TYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADM 303
T N + S+ K + L+ M+ P+ +F+ LI+ C EG+ +++ + M
Sbjct: 200 TCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM 259
Query: 304 KKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKT 363
+K GY P Y T+ H+ C+ G F++A E+ KG + T L+ L ++
Sbjct: 260 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 319
Query: 364 DDAKELIKQVKEKFTESSD 382
L++ ++++ ++
Sbjct: 320 AKGYLLLRDMRKRMIHPNE 338
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 89/207 (42%), Gaps = 2/207 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMD-RNSVRPNAVTFSNAIEGFYSEKKFEE 224
SI PD TY ++I G T E + R +V PN V ++ ++G + +++
Sbjct: 683 SILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWK- 741
Query: 225 VGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLI 284
G + + G +P + T N I ++ + + LL M + PN +++ L+
Sbjct: 742 AGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILL 801
Query: 285 HGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWV 344
HGY ++ + ++ + G P+ +L +CE E +I K + +G
Sbjct: 802 HGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVE 861
Query: 345 PNFTTMKKLVTGLVGVSKTDDAKELIK 371
+ T L++ + + A +L+K
Sbjct: 862 VDRYTFNMLISKCCANGEINWAFDLVK 888
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 111/284 (39%), Gaps = 22/284 (7%)
Query: 91 TSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKD 150
+ R D+ L +SI+L G +LP+ +T + + + N L I K
Sbjct: 805 SKRKDVSTSFLLYRSIILNG---ILPDKLTCHS-------LVLGICESNMLEIGLKILKA 854
Query: 151 YKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFS 210
+ + R ++ D T+N +I +G + + ++ M + + T
Sbjct: 855 F--ICR---------GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCD 903
Query: 211 NAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMIS 270
+ +F+E VL M K G+SP Y I LC++ A + + MI+
Sbjct: 904 AMVSVLNRNHRFQESRMVLHEMS-KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIA 962
Query: 271 GGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFES 330
P V+ S ++ G DEA + M K P + TL H C+ G+
Sbjct: 963 HKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIE 1022
Query: 331 AFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVK 374
A E+ + G + + L+TGL A EL +++K
Sbjct: 1023 ALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMK 1066
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 135/275 (49%), Gaps = 5/275 (1%)
Query: 101 FLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLD 160
F+ I L + +A T+F +M ++ I P+V N ++ A K+ I+ +
Sbjct: 450 FMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSE 509
Query: 161 FPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEK 220
+ ++P+ TY+ +I F ++ + + ++++M+ ++ N V ++ I G
Sbjct: 510 MLEK-GLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVG 568
Query: 221 KFEEVGKVLKMM--EEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWV 278
+ + ++L+ + E++Y MS ++YN I K+ T A + M G+ PN V
Sbjct: 569 QTSKAKEMLQNLIKEKRYSMS--CTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVV 626
Query: 279 SFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKES 338
+F+ LI+G+C +D A ++ +MK K + P Y L C+ D ++A+ + E
Sbjct: 627 TFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSEL 686
Query: 339 MDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
+ G +PN + L++G + K D A +L K++
Sbjct: 687 PELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKM 721
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 93/228 (40%), Gaps = 36/228 (15%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
K YS+ +YN++I F + G T S EM N PN VTF++ I GF +
Sbjct: 584 KRYSMS--CTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRM 641
Query: 223 E---EVGKVLKMMEEKY-------------------------------GMSPALSTYNVR 248
+ E+ +K ME K G+ P +S YN
Sbjct: 642 DLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSL 701
Query: 249 ILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGY 308
I L + A L + M++ G + +++ +I G +GN++ A +++++ G
Sbjct: 702 ISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGI 761
Query: 309 KPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTG 356
P+ + L + L + G F A ++ +E K PN ++ G
Sbjct: 762 VPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAG 809
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 106/234 (45%), Gaps = 7/234 (2%)
Query: 130 QITPSVKSLNALLFAALIAKDYKEVSRIYLDFP-----KNYSIQPDVETYNTVIKSFAES 184
+++ + KS N + F +LI + + +R+ L K+ ++ D+ Y +I F +
Sbjct: 615 EMSENGKSPNVVTFTSLI-NGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKK 673
Query: 185 GSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALST 244
+ Y++ SE+ + PN +++ I GF + K + + K M G+S L T
Sbjct: 674 NDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVND-GISCDLFT 732
Query: 245 YNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMK 304
Y I L K + A L ++ G P+ + L++G +G +A K+ +MK
Sbjct: 733 YTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMK 792
Query: 305 KRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLV 358
K+ P Y T+ G+ AF + E ++KG V + T LV+G V
Sbjct: 793 KKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRV 846
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/311 (18%), Positives = 129/311 (41%), Gaps = 36/311 (11%)
Query: 118 AVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTV 177
A+ MR + + S ++ +++ A + + +E R+ +D + I V ++
Sbjct: 293 ALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRV-MDEMVGFGIPMSVIAATSL 351
Query: 178 IKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEE------------- 224
+ + + + + M+ + P+ V FS +E F + E+
Sbjct: 352 VNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRI 411
Query: 225 ------VGKVLKMMEEKYGMSPALSTYNVRI--------------LSLCKLKRTSEAKAL 264
V +++ + AL +N L CK + A +
Sbjct: 412 APSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSF 471
Query: 265 LQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCE 324
L+ M G +PN V +++++ +C N+D A+ +F++M ++G +P + Y L +
Sbjct: 472 LKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFK 531
Query: 325 GGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQ-VKEK-FTESSD 382
D ++A+++ + + N ++ GL V +T AKE+++ +KEK ++ S
Sbjct: 532 NKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCT 591
Query: 383 KWDEIEAELIK 393
++ I +K
Sbjct: 592 SYNSIIDGFVK 602
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 129/271 (47%), Gaps = 6/271 (2%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
+ Q + +A+ ++M +E P V N ++ + + ++ D + ++
Sbjct: 149 FCQGNRVFDAIDLVSKM-EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELF-DRMERDGVR 206
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
D TYN+++ SG S ++ +M + PN +TF+ I+ F E KF E K+
Sbjct: 207 ADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKL 266
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
+ M + + P + TYN I LC R EAK +L M++ G P+ V+++ LI+G+C
Sbjct: 267 YEEMTRR-CVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFC 325
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
+DE K+F +M +RG ++ Y T+ + G ++A EI MD PN
Sbjct: 326 KSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR-MDSR--PNIR 382
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQVKEKFTE 379
T L+ GL + + A L + +++ E
Sbjct: 383 TYSILLYGLCMNWRVEKALVLFENMQKSEIE 413
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 152/350 (43%), Gaps = 44/350 (12%)
Query: 62 DRIALSVAISKLKDGNH-FSTIDQFLR-DLPTSRPDLRNERFLSQSIVLYGQAR--MLPN 117
D + +S I+ GN F ID + + RPD+ + + ++ G + ++ +
Sbjct: 138 DVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV-----VIYNTIIDGSCKIGLVND 192
Query: 118 AVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTV 177
AV F RM + + + N+L+ + + + +R+ D I P+V T+ V
Sbjct: 193 AVELFDRMERD-GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR-DIVPNVITFTAV 250
Query: 178 IKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYG 237
I F + G S + EM R V P+ T+++ I G + +E ++L +M K G
Sbjct: 251 IDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK-G 309
Query: 238 MSPALSTYNVRILSLCKLKRTSEAKAL-------------------LQGMISGGR----- 273
P + TYN I CK KR E L +QG GR
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ 369
Query: 274 --------KPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEG 325
+PN ++S L++G C +++A +F +M+K + + Y + H +C+
Sbjct: 370 EIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKI 429
Query: 326 GDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
G+ E A+++ + KG P+ + +++G + D + L ++++E
Sbjct: 430 GNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQE 479
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 102/212 (48%), Gaps = 1/212 (0%)
Query: 165 YSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEE 224
+ +PDV T +++I F + ++S+M+ RP+ V ++ I+G +
Sbjct: 133 FGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVND 192
Query: 225 VGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLI 284
++ ME G+ TYN + LC R S+A L++ M+ PN ++F+ +I
Sbjct: 193 AVELFDRMERD-GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 285 HGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWV 344
+ EG EA K++ +M +R P+ Y +L + LC G + A ++ + KG +
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 311
Query: 345 PNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
P+ T L+ G + D+ +L +++ ++
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 343
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 106/239 (44%), Gaps = 4/239 (1%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
PS+ + +L +K+Y V ++ + I D+ +YN VI S
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHM-EVCGIGHDLYSYNIVINCLCRCSRFVIALS 125
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFY-SEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILS 251
++ +M + P+ VT S+ I GF + F+ + V KM E+ G P + YN I
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM--EEMGFRPDVVIYNTIIDG 183
Query: 252 LCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPE 311
CK+ ++A L M G + + V+++ L+ G C G +A ++ DM R P
Sbjct: 184 SCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPN 243
Query: 312 SPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELI 370
+ + + G F A ++ +E + P+ T L+ GL + D+AK+++
Sbjct: 244 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML 302
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 101/215 (46%), Gaps = 5/215 (2%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
+ P V + N+L+ + E ++ LD PDV TYNT+I F +S
Sbjct: 275 VDPDVFTYNSLINGLCMHGRVDEAKQM-LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEG 333
Query: 191 YSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRIL 250
+ EM + + + +T++ I+G++ + + ++ M+ + P + TY++ +
Sbjct: 334 TKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR----PNIRTYSILLY 389
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
LC R +A L + M + + +++ +IHG C GN+++A +F + +G KP
Sbjct: 390 GLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKP 449
Query: 311 ESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
+ Y T+ C ++ + + ++ + G +P
Sbjct: 450 DVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 1/170 (0%)
Query: 204 PNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKA 263
P+ V FS + K ++ V + ME G+ L +YN+ I LC+ R A +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHME-VCGIGHDLYSYNIVINCLCRCSRFVIALS 125
Query: 264 LLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLC 323
++ M+ G +P+ V+ S LI+G+C + +A + + M++ G++P+ Y T+ C
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 185
Query: 324 EGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
+ G A E+ G + T LV GL + DA L++ +
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 1/211 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
+ P TY +I + G + +++EM V V F+ I+G+ + +E
Sbjct: 359 GLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEA 418
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
+ +ME+K G + T N +LKR EAK L M+ GG K + VS+++LI
Sbjct: 419 SMIYDVMEQK-GFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLID 477
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
YC EGN++EAK++F +M +G +P + Y + + C+ G + A ++ G P
Sbjct: 478 VYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDP 537
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+ T L+ G D+A L ++ K
Sbjct: 538 DSYTYTSLIHGECIADNVDEAMRLFSEMGLK 568
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 97/207 (46%), Gaps = 6/207 (2%)
Query: 153 EVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNA 212
E S IY D + Q DV T NT+ F L M V+ + V+++N
Sbjct: 417 EASMIY-DVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNL 475
Query: 213 IEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGG 272
I+ + E EE ++ M K G+ P TYNV I + CK + EA+ L M + G
Sbjct: 476 IDVYCKEGNVEEAKRLFVEMSSK-GVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANG 534
Query: 273 RKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAF 332
P+ +++ LIHG C N+DEA ++F++M +G S Y + L + G + AF
Sbjct: 535 MDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAF 594
Query: 333 EITKESMDKGWVPNFTTMKKLVTGLVG 359
+ E KG+ T K+ T L+G
Sbjct: 595 GLYDEMKRKGY----TIDNKVYTALIG 617
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 3/205 (1%)
Query: 173 TYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK-VLKM 231
+NT+I + G I M++ + + T + F K+++E + + +M
Sbjct: 401 VFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM 460
Query: 232 MEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEG 291
ME G+ + +Y I CK EAK L M S G +PN ++++ +I+ YC +G
Sbjct: 461 MEG--GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQG 518
Query: 292 NLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMK 351
+ EA+K+ A+M+ G P+S Y +L H C + + A + E KG N T
Sbjct: 519 KIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYT 578
Query: 352 KLVTGLVGVSKTDDAKELIKQVKEK 376
+++GL K+D+A L ++K K
Sbjct: 579 VMISGLSKAGKSDEAFGLYDEMKRK 603
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 103/273 (37%), Gaps = 69/273 (25%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
I+P+ TYNT+I ++ + S V +L M ++ V N VT++ +E K +
Sbjct: 254 GIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDA 313
Query: 226 GKVLKMMEEK----------------------------------YGMSPALSTYNVRILS 251
K+ M E+ G+SP+ TY I
Sbjct: 314 EKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDG 373
Query: 252 LCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPE 311
+CK+ A+ L+ M S G V F+ LI GYC +G +DEA ++ M+++G++ +
Sbjct: 374 VCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQAD 433
Query: 312 -------SPC----------------------------YFTLAHFLCEGGDFESAFEITK 336
+ C Y L C+ G+ E A +
Sbjct: 434 VFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFV 493
Query: 337 ESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKEL 369
E KG PN T ++ K +A++L
Sbjct: 494 EMSSKGVQPNAITYNVMIYAYCKQGKIKEARKL 526
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 90/184 (48%), Gaps = 1/184 (0%)
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
I M + V+ + + +EG + E+ K++K K G+ P TYN I +
Sbjct: 211 IFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVK-GIKPEAYTYNTIINAY 269
Query: 253 CKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPES 312
K + S + +L+ M G N V+++ L+ G + +A+K+F +M++RG + +
Sbjct: 270 VKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDV 329
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQ 372
Y +L + C G+ + AF + E +KG P+ T L+ G+ V + A+ L+ +
Sbjct: 330 HVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNE 389
Query: 373 VKEK 376
++ K
Sbjct: 390 MQSK 393
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 91/211 (43%), Gaps = 1/211 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
++ V + V++ G ++ E ++P A T++ I + ++ F V
Sbjct: 219 GVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGV 278
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
VLK+M +K G+ TY + + K + S+A+ L M G + + ++ LI
Sbjct: 279 EGVLKVM-KKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLIS 337
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
C +GN+ A +F ++ ++G P S Y L +C+ G+ +A + E KG
Sbjct: 338 WNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNI 397
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
L+ G D+A + +++K
Sbjct: 398 TQVVFNTLIDGYCRKGMVDEASMIYDVMEQK 428
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 1/159 (0%)
Query: 222 FEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFS 281
FEE +V M +K G+S + V +++ K +R + + M+ G K S +
Sbjct: 170 FEEGLRVFDYMVKK-GLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLT 228
Query: 282 HLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDK 341
++ G C G ++++KK+ + +G KPE+ Y T+ + + DF + K
Sbjct: 229 IVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKD 288
Query: 342 GWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTES 380
G V N T L+ V K DA++L +++E+ ES
Sbjct: 289 GVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIES 327
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 160/373 (42%), Gaps = 47/373 (12%)
Query: 47 LDICRAASLTPDFHLD----RIALSVAISK-LKDGNHFSTIDQFLRDLPTS-RPDLRNER 100
L +C + L P+ HL + +A+S L +G + F + + +P+L
Sbjct: 112 LSLCNSL-LHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCN 170
Query: 101 FLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLD 160
L +V Y + + +A F M + ++ +V++ N L+ + ++ +
Sbjct: 171 TLLIGLVRYPSSFSISSAREVFDDMV-KIGVSLNVQTFNVLVNGYCLEGKLEDALGMLER 229
Query: 161 FPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEK 220
+ + PD TYNT++K+ ++ G S + +L +M +N + PN VT++N + G+
Sbjct: 230 MVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLG 289
Query: 221 KFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSF 280
+E +++++M++ + P L TYN+ I LC E L+ M S +P+ V++
Sbjct: 290 SLKEAFQIVELMKQT-NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTY 348
Query: 281 SHLIHGYCWEGNLD-EAKKVFADMKK---------------------------------- 305
+ LI G C+E L EA+K+ M+
Sbjct: 349 NTLIDG-CFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELV 407
Query: 306 --RGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKT 363
G+ P+ Y TL + GD A E+ +E KG N T+ ++ L K
Sbjct: 408 DMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKL 467
Query: 364 DDAKELIKQVKEK 376
D+A L+ ++
Sbjct: 468 DEAHNLLNSAHKR 480
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 141/316 (44%), Gaps = 7/316 (2%)
Query: 62 DRIALSVAISKLKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARM--LPNAV 119
D + + + + S + + L D+ + L R ++V YG ++ L A
Sbjct: 239 DNVTYNTILKAMSKKGRLSDLKELLLDM--KKNGLVPNRVTYNNLV-YGYCKLGSLKEAF 295
Query: 120 TAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIK 179
M+ + + P + + N L+ A +E + +D K+ +QPDV TYNT+I
Sbjct: 296 QIVELMK-QTNVLPDLCTYNILINGLCNAGSMREGLEL-MDAMKSLKLQPDVVTYNTLID 353
Query: 180 SFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMS 239
E G + ++ +M+ + V+ N VT + +++ E+K E V + +K + + +G S
Sbjct: 354 GCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFS 413
Query: 240 PALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKV 299
P + TY+ I + K+ S A +++ M G K N ++ + ++ C E LDEA +
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNL 473
Query: 300 FADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVG 359
KRG+ + Y TL E A E+ E P +T L+ GL
Sbjct: 474 LNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCH 533
Query: 360 VSKTDDAKELIKQVKE 375
KT+ A E ++ E
Sbjct: 534 HGKTELAMEKFDELAE 549
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 116/260 (44%), Gaps = 35/260 (13%)
Query: 154 VSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAI 213
V+R + + PD+ TY+T+IK++ + G S ++ EM + ++ N +T + +
Sbjct: 399 VTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTIL 458
Query: 214 EGFYSEKKFEE--------------------------------VGKVLKMMEE--KYGMS 239
+ E+K +E V K L+M +E K ++
Sbjct: 459 DALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKIT 518
Query: 240 PALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKV 299
P +ST+N I LC +T A + G P+ +F+ +I GYC EG +++A +
Sbjct: 519 PTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEF 578
Query: 300 FADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVG 359
+ + K +KP++ L + LC+ G E A +++ V + T +++
Sbjct: 579 YNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCK 637
Query: 360 VSKTDDAKELIKQVKEKFTE 379
K +A +L+ +++EK E
Sbjct: 638 DKKLKEAYDLLSEMEEKGLE 657
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 6/179 (3%)
Query: 125 MRDEFQ---ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSF 181
M DE + ITP+V + N+L+ L E++ D + PD T+N++I +
Sbjct: 508 MWDEMKKVKITPTVSTFNSLI-GGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGY 566
Query: 182 AESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPA 241
+ G + +E ++S +P+ T + + G E E+ + E+ +
Sbjct: 567 CKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTV 626
Query: 242 LSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVF 300
TYN I + CK K+ EA LL M G +P+ +++ I +G L E ++
Sbjct: 627 --TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELL 683
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 125/273 (45%), Gaps = 3/273 (1%)
Query: 101 FLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLD 160
+ +I + + + AV F++M +E + P+V + N ++ + Y E + ++ +
Sbjct: 262 LFTTAINAFCKGGKVEEAVKLFSKM-EEAGVAPNVVTFNTVIDGLGMCGRYDE-AFMFKE 319
Query: 161 FPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEK 220
++P + TY+ ++K + Y +L EM + PN + ++N I+ F
Sbjct: 320 KMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAG 379
Query: 221 KFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSF 280
+ ++ +M K G+S STYN I CK + A+ LL+ M+S G N SF
Sbjct: 380 SLNKAIEIKDLMVSK-GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 281 SHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMD 340
+ +I C D A + +M R P TL LC+ G A E+ + ++
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 498
Query: 341 KGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
KG+V + T L+ GL K D+A + K++
Sbjct: 499 KGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 531
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 115/241 (47%), Gaps = 3/241 (1%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
PS + N LL + + A ++++ + K + PDV + T I +F + G
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCEAFDVVCK--GVSPDVYLFTTAINAFCKGGKVEEAVK 281
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
+ S+M+ V PN VTF+ I+G +++E + M E+ GM P L TY++ + L
Sbjct: 282 LFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVER-GMEPTLITYSILVKGL 340
Query: 253 CKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPES 312
+ KR +A +L+ M G PN + +++LI + G+L++A ++ M +G S
Sbjct: 341 TRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTS 400
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQ 372
Y TL C+ G ++A + KE + G+ N + ++ L D A + +
Sbjct: 401 STYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 460
Query: 373 V 373
+
Sbjct: 461 M 461
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 106/238 (44%), Gaps = 2/238 (0%)
Query: 139 NALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMD 198
NALL A E RI + + V +YNT+I + L EM
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRV-SYNTLISGCCGKKKLDEAFMFLDEMV 567
Query: 199 RNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRT 258
+ ++P+ T+S I G ++ K EE + + + GM P + TY+V I CK +RT
Sbjct: 568 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK-RNGMLPDVYTYSVMIDGCCKAERT 626
Query: 259 SEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTL 318
E + M+S +PN V ++HLI YC G L A ++ DMK +G P S Y +L
Sbjct: 627 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 686
Query: 319 AHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+ E A + +E +G PN L+ G + + + L++++ K
Sbjct: 687 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 744
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 97/183 (53%), Gaps = 7/183 (3%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
++QP+ YN +I+++ SG S + +M + PN+ T+++ I+G + EE
Sbjct: 640 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEA 699
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
+ + M + G+ P + Y I KL + + + LL+ M S PN ++++ +I
Sbjct: 700 KLLFEEMRME-GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIG 758
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAH-FLCEGGDFESAFEITKE----SMD 340
GY +GN+ EA ++ +M+++G P+S Y + +L +GG E AF+ + E ++
Sbjct: 759 GYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLE-AFKGSDEENYAAII 817
Query: 341 KGW 343
+GW
Sbjct: 818 EGW 820
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 1/211 (0%)
Query: 164 NYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFE 223
N D T N ++ E+G + I E+ + V+++ I G +KK +
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
Query: 224 EVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHL 283
E L M ++ G+ P TY++ I L + + EA G P+ ++S +
Sbjct: 558 EAFMFLDEMVKR-GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 284 IHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGW 343
I G C +E ++ F +M + +P + Y L C G A E+ ++ KG
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 344 VPNFTTMKKLVTGLVGVSKTDDAKELIKQVK 374
PN T L+ G+ +S+ ++AK L ++++
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMR 707
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 1/217 (0%)
Query: 140 ALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDR 199
++L L + E + + D K + PDV TY+ +I ++ T EM
Sbjct: 579 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 638
Query: 200 NSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTS 259
+V+PN V +++ I + + ++ + M+ K G+SP +TY I + + R
Sbjct: 639 KNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK-GISPNSATYTSLIKGMSIISRVE 697
Query: 260 EAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLA 319
EAK L + M G +PN ++ LI GY G + + + + +M + P Y +
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757
Query: 320 HFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTG 356
G+ A + E +KG VP+ T K+ + G
Sbjct: 758 GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 794
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 72/142 (50%), Gaps = 5/142 (3%)
Query: 237 GMSPALSTYNVRILSLCKLKRTSEAKALLQG--MISGGRKPNWVSFSHLIHGYCWEGNLD 294
GM P+ +T N+ + SL R +E + + ++ G P+ F+ I+ +C G ++
Sbjct: 221 GMFPSKTTCNILLTSLV---RANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVE 277
Query: 295 EAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
EA K+F+ M++ G P + T+ L G ++ AF ++ +++G P T LV
Sbjct: 278 EAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 337
Query: 355 TGLVGVSKTDDAKELIKQVKEK 376
GL + DA ++K++ +K
Sbjct: 338 KGLTRAKRIGDAYFVLKEMTKK 359
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 125/273 (45%), Gaps = 3/273 (1%)
Query: 101 FLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLD 160
+ +I + + + AV F++M +E + P+V + N ++ + Y E + ++ +
Sbjct: 262 LFTTAINAFCKGGKVEEAVKLFSKM-EEAGVAPNVVTFNTVIDGLGMCGRYDE-AFMFKE 319
Query: 161 FPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEK 220
++P + TY+ ++K + Y +L EM + PN + ++N I+ F
Sbjct: 320 KMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAG 379
Query: 221 KFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSF 280
+ ++ +M K G+S STYN I CK + A+ LL+ M+S G N SF
Sbjct: 380 SLNKAIEIKDLMVSK-GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 281 SHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMD 340
+ +I C D A + +M R P TL LC+ G A E+ + ++
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 498
Query: 341 KGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
KG+V + T L+ GL K D+A + K++
Sbjct: 499 KGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 531
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 115/241 (47%), Gaps = 3/241 (1%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
PS + N LL + + A ++++ + K + PDV + T I +F + G
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCEAFDVVCK--GVSPDVYLFTTAINAFCKGGKVEEAVK 281
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
+ S+M+ V PN VTF+ I+G +++E + M E+ GM P L TY++ + L
Sbjct: 282 LFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVER-GMEPTLITYSILVKGL 340
Query: 253 CKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPES 312
+ KR +A +L+ M G PN + +++LI + G+L++A ++ M +G S
Sbjct: 341 TRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTS 400
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQ 372
Y TL C+ G ++A + KE + G+ N + ++ L D A + +
Sbjct: 401 STYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 460
Query: 373 V 373
+
Sbjct: 461 M 461
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 106/238 (44%), Gaps = 2/238 (0%)
Query: 139 NALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMD 198
NALL A E RI + + V +YNT+I + L EM
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRV-SYNTLISGCCGKKKLDEAFMFLDEMV 567
Query: 199 RNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRT 258
+ ++P+ T+S I G ++ K EE + + + GM P + TY+V I CK +RT
Sbjct: 568 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK-RNGMLPDVYTYSVMIDGCCKAERT 626
Query: 259 SEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTL 318
E + M+S +PN V ++HLI YC G L A ++ DMK +G P S Y +L
Sbjct: 627 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 686
Query: 319 AHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+ E A + +E +G PN L+ G + + + L++++ K
Sbjct: 687 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 744
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 97/183 (53%), Gaps = 7/183 (3%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
++QP+ YN +I+++ SG S + +M + PN+ T+++ I+G + EE
Sbjct: 640 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEA 699
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
+ + M + G+ P + Y I KL + + + LL+ M S PN ++++ +I
Sbjct: 700 KLLFEEMRME-GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIG 758
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAH-FLCEGGDFESAFEITKE----SMD 340
GY +GN+ EA ++ +M+++G P+S Y + +L +GG E AF+ + E ++
Sbjct: 759 GYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLE-AFKGSDEENYAAII 817
Query: 341 KGW 343
+GW
Sbjct: 818 EGW 820
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 1/211 (0%)
Query: 164 NYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFE 223
N D T N ++ E+G + I E+ + V+++ I G +KK +
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
Query: 224 EVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHL 283
E L M ++ G+ P TY++ I L + + EA G P+ ++S +
Sbjct: 558 EAFMFLDEMVKR-GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 284 IHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGW 343
I G C +E ++ F +M + +P + Y L C G A E+ ++ KG
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 344 VPNFTTMKKLVTGLVGVSKTDDAKELIKQVK 374
PN T L+ G+ +S+ ++AK L ++++
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMR 707
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 1/217 (0%)
Query: 140 ALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDR 199
++L L + E + + D K + PDV TY+ +I ++ T EM
Sbjct: 579 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 638
Query: 200 NSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTS 259
+V+PN V +++ I + + ++ + M+ K G+SP +TY I + + R
Sbjct: 639 KNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK-GISPNSATYTSLIKGMSIISRVE 697
Query: 260 EAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLA 319
EAK L + M G +PN ++ LI GY G + + + + +M + P Y +
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757
Query: 320 HFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTG 356
G+ A + E +KG VP+ T K+ + G
Sbjct: 758 GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 794
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 72/142 (50%), Gaps = 5/142 (3%)
Query: 237 GMSPALSTYNVRILSLCKLKRTSEAKALLQG--MISGGRKPNWVSFSHLIHGYCWEGNLD 294
GM P+ +T N+ + SL R +E + + ++ G P+ F+ I+ +C G ++
Sbjct: 221 GMFPSKTTCNILLTSLV---RANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVE 277
Query: 295 EAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
EA K+F+ M++ G P + T+ L G ++ AF ++ +++G P T LV
Sbjct: 278 EAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 337
Query: 355 TGLVGVSKTDDAKELIKQVKEK 376
GL + DA ++K++ +K
Sbjct: 338 KGLTRAKRIGDAYFVLKEMTKK 359
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 90/204 (44%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
I+PDV TYN +I G S +LS+M ++ P+ V F+ I+ F E K E
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
K+ M + P + YN I CK KR E + + M G N V+++ LIH
Sbjct: 340 EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
G+ + D A+ VF M G P+ Y L LC G+ E+A + + +
Sbjct: 400 GFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL 459
Query: 346 NFTTMKKLVTGLVGVSKTDDAKEL 369
+ T ++ L K +D +L
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDL 483
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 125/264 (47%), Gaps = 4/264 (1%)
Query: 113 RMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVE 172
+ + +A F +M + I P V + N L+ + + SR+ D + +I PD+
Sbjct: 264 KHMDDAFDLFNKMETK-GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEK-NINPDLV 321
Query: 173 TYNTVIKSFAESGSTSSVYSILSEMDRNS-VRPNAVTFSNAIEGFYSEKKFEEVGKVLKM 231
+N +I +F + G + EM ++ P+ V ++ I+GF K+ EE +V +
Sbjct: 322 FFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFRE 381
Query: 232 MEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEG 291
M ++ G+ TY I + + A+ + + M+S G P+ ++++ L+ G C G
Sbjct: 382 MSQR-GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNG 440
Query: 292 NLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMK 351
N++ A VF M+KR K + Y T+ LC+ G E +++ KG PN T
Sbjct: 441 NVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 500
Query: 352 KLVTGLVGVSKTDDAKELIKQVKE 375
+++G ++A L ++KE
Sbjct: 501 TMMSGFCRKGLKEEADALFVEMKE 524
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 123/286 (43%), Gaps = 13/286 (4%)
Query: 93 RPDLRNERFLSQSIVLYGQ----ARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIA 148
+PD+ L + YG+ +R+L + + E I P + NAL+ A +
Sbjct: 282 KPDVFTYNPLISCLCNYGRWSDASRLLSDML--------EKNINPDLVFFNALIDAFVKE 333
Query: 149 KDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVT 208
E ++Y + K+ PDV YNT+IK F + + EM + + N VT
Sbjct: 334 GKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 393
Query: 209 FSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGM 268
++ I GF+ + + V K M G+ P + TYN+ + LC A + + M
Sbjct: 394 YTTLIHGFFQARDCDNAQMVFKQMVSD-GVHPDIMTYNILLDGLCNNGNVETALVVFEYM 452
Query: 269 ISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDF 328
K + V+++ +I C G +++ +F + +G KP Y T+ C G
Sbjct: 453 QKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK 512
Query: 329 ESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVK 374
E A + E + G +PN T L+ + + ELIK+++
Sbjct: 513 EEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMR 558
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 1/214 (0%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
+N I ++ TY+ I F S +IL +M + P+ VT ++ + GF +
Sbjct: 102 QNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRI 161
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
E ++ M E G P T+ + L + + SEA AL++ M+ G +P+ V++
Sbjct: 162 SEAVALVDQMVE-MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 220
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
+I+G C G D A + M+K + + Y T+ LC+ + AF++ + KG
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 343 WVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
P+ T L++ L + DA L+ + EK
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEK 314
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 2/209 (0%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P + T N+++ F S +++ +M +P+ VTF+ + G + K E +
Sbjct: 143 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 202
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
++ M K G P L TY I LCK A LL M G + + V ++ +I G C
Sbjct: 203 VERMVVK-GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLC 261
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
++D+A +F M+ +G KP+ Y L LC G + A + + ++K P+
Sbjct: 262 KYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLV 321
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQ-VKEK 376
L+ V K +A++L + VK K
Sbjct: 322 FFNALIDAFVKEGKLVEAEKLYDEMVKSK 350
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 96/235 (40%), Gaps = 37/235 (15%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
QPD+ TY VI + G ++L++M++ + + V ++ I+G K ++
Sbjct: 212 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFD 271
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHL---- 283
+ ME K G+ P + TYN I LC R S+A LL M+ P+ V F+ L
Sbjct: 272 LFNKMETK-GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAF 330
Query: 284 --------------------------------IHGYCWEGNLDEAKKVFADMKKRGYKPE 311
I G+C ++E +VF +M +RG
Sbjct: 331 VKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 390
Query: 312 SPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDA 366
+ Y TL H + D ++A + K+ + G P+ T L+ GL + A
Sbjct: 391 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETA 445
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 92/189 (48%), Gaps = 1/189 (0%)
Query: 192 SILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILS 251
+ +M ++ P+ V FS + KF+ V + + M+ G+S L TY++ I
Sbjct: 61 GLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQN-LGISHNLYTYSIFINY 119
Query: 252 LCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPE 311
C+ + S A A+L M+ G P+ V+ + L++G+C + EA + M + GY+P+
Sbjct: 120 FCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPD 179
Query: 312 SPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIK 371
+ + TL H L + A + + + KG P+ T ++ GL + D A L+
Sbjct: 180 TVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLN 239
Query: 372 QVKEKFTES 380
++++ E+
Sbjct: 240 KMEKGKIEA 248
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 132/267 (49%), Gaps = 4/267 (1%)
Query: 106 IVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFA-ALIAKDYKEVSRIYLDFPKN 164
I YG+ ++ RM++E +I+PS+ + N ++ A A D++ + ++ + ++
Sbjct: 183 INAYGRNGRYETSLELLDRMKNE-KISPSILTYNTVINACARGGLDWEGLLGLFAEM-RH 240
Query: 165 YSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEE 224
IQPD+ TYNT++ + A G + M+ + P+ T+S+ +E F ++ E+
Sbjct: 241 EGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEK 300
Query: 225 VGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLI 284
V +L M G P +++YNV + + K EA + M + G PN ++S L+
Sbjct: 301 VCDLLGEMASG-GSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL 359
Query: 285 HGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWV 344
+ + G D+ +++F +MK P++ Y L EGG F+ + + +++
Sbjct: 360 NLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIE 419
Query: 345 PNFTTMKKLVTGLVGVSKTDDAKELIK 371
P+ T + ++ +DA+++++
Sbjct: 420 PDMETYEGIIFACGKGGLHEDARKILQ 446
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 117/258 (45%), Gaps = 4/258 (1%)
Query: 98 NERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRI 157
NE + I L G+ +L + F M + ++ SV S AL+ A Y E S
Sbjct: 140 NEHIYTIMISLLGREGLLDKCLEVFDEMPSQ-GVSRSVFSYTALINAYGRNGRY-ETSLE 197
Query: 158 YLDFPKNYSIQPDVETYNTVIKSFAESG-STSSVYSILSEMDRNSVRPNAVTFSNAIEGF 216
LD KN I P + TYNTVI + A G + + +EM ++P+ VT++ +
Sbjct: 198 LLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSAC 257
Query: 217 YSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPN 276
+E V + M + G+ P L+TY+ + + KL+R + LL M SGG P+
Sbjct: 258 AIRGLGDEAEMVFRTMNDG-GIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPD 316
Query: 277 WVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITK 336
S++ L+ Y G++ EA VF M+ G P + Y L + + G ++ ++
Sbjct: 317 ITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFL 376
Query: 337 ESMDKGWVPNFTTMKKLV 354
E P+ T L+
Sbjct: 377 EMKSSNTDPDAATYNILI 394
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 106/255 (41%), Gaps = 41/255 (16%)
Query: 92 SRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDY 151
S PD+ + L ++ Y ++ + A+ F +M+ TP+ + + LL + Y
Sbjct: 313 SLPDITSYNVLLEA---YAKSGSIKEAMGVFHQMQAA-GCTPNANTYSVLLNLFGQSGRY 368
Query: 152 KEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS------------------- 192
+V +++L+ K+ + PD TYN +I+ F E G V +
Sbjct: 369 DDVRQLFLEM-KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEG 427
Query: 193 ----------------ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKY 236
IL M N + P++ ++ IE F +EE M E
Sbjct: 428 IIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHE-V 486
Query: 237 GMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEA 296
G +P++ T++ + S + E++A+L ++ G N +F+ I Y G +EA
Sbjct: 487 GSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEA 546
Query: 297 KKVFADMKKRGYKPE 311
K + DM+K P+
Sbjct: 547 VKTYVDMEKSRCDPD 561
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 124/257 (48%), Gaps = 8/257 (3%)
Query: 125 MRD--EFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFA 182
+RD E +I P V + NAL+ A++ E ++ D + I PD TYN++I F
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKL-CDEMLHRCIFPDTVTYNSMIYGFC 412
Query: 183 ESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPAL 242
+ + M P+ VTF+ I+ + K+ +E ++L+ + + G+
Sbjct: 413 KHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR-GLVANT 467
Query: 243 STYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFAD 302
+TYN I C++ + A+ L Q MIS G P+ ++ + L++G+C L+EA ++F
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527
Query: 303 MKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSK 362
++ ++ Y + H +C+G + A+++ G P+ T +++G G S
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587
Query: 363 TDDAKELIKQVKEKFTE 379
DA L ++K+ E
Sbjct: 588 ISDANVLFHKMKDNGHE 604
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 14/224 (6%)
Query: 167 IQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVG 226
I ++ ++N +IK F + S S ++ + +P+ VTF+ + G E + E
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 227 KVLKMMEE--------------KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGG 272
+ M E + G++P + T+N I LC R EA AL+ M+ G
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 273 RKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAF 332
+ V++ +++G C G+ A + + M++ KP+ Y + LC+ G A
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 333 EITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+ E ++KG PN T ++ G + DA+ L++ + E+
Sbjct: 317 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 114/238 (47%), Gaps = 5/238 (2%)
Query: 128 EFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGST 187
+ +P V + N ++ AK E ++ + + + + TYNT+I F E +
Sbjct: 425 DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR-GLVANTTTYNTLIHGFCEVDNL 483
Query: 188 SSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMME-EKYGMSPALSTYN 246
++ + EM + V P+ +T + + GF +K EE ++ ++++ K + YN
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTV--AYN 541
Query: 247 VRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKR 306
+ I +CK + EA L + G +P+ +++ +I G+C + + +A +F MK
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDN 601
Query: 307 GYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTD 364
G++P++ Y TL + G+ + + E+ E G+ + T+ K+V L+ + D
Sbjct: 602 GHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI-KMVADLITDGRLD 658
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 101/228 (44%), Gaps = 2/228 (0%)
Query: 142 LFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNS 201
LF ++ + E ++ D + P V T+NT+I G +++++M
Sbjct: 198 LFGYMVETGFLEAVALF-DQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 202 VRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEA 261
+ + VT+ + G + +L MEE + + P + Y+ I LCK S+A
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH-IKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 262 KALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHF 321
+ L M+ G PN +++ +I G+C G +A+++ DM +R P+ + L
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375
Query: 322 LCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKEL 369
+ G A ++ E + + P+ T ++ G ++ DDAK +
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM 423
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 18/222 (8%)
Query: 168 QPDVETYNTVIKSFA----------------ESGSTSSVYSILSEMDRNSVRPNAVTFSN 211
QPDV T+NT++ E+G +V ++ +M + P +TF+
Sbjct: 173 QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAV-ALFDQMVEIGLTPVVITFNT 231
Query: 212 AIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISG 271
I G E + E ++ M K G+ + TY + +CK+ T A LL M
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGK-GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET 290
Query: 272 GRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESA 331
KP+ V +S +I C +G+ +A+ +F++M ++G P Y + C G + A
Sbjct: 291 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 350
Query: 332 FEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
+ ++ +++ P+ T L++ V K +A++L ++
Sbjct: 351 QRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 146/340 (42%), Gaps = 9/340 (2%)
Query: 36 LLKSETNPERILDICRAASLTPDFHLDRIALSVAISKLKDGNHFSTIDQFLRDLPTSRPD 95
LLKS+ N L R D+ ++L++ L DG FL D +P+
Sbjct: 86 LLKSQNNVLFSLWFFRWLCSNYDYTPGPVSLNILFGALLDGKAVKAAKSFL-DTTGFKPE 144
Query: 96 LRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVS 155
L Q + + ++ A+ + ++D I+ SV + N++L L A+
Sbjct: 145 ---PTLLEQYVKCLSEEGLVEEAIEVYNVLKD-MGISSSVVTCNSVLLGCLKARKLDRFW 200
Query: 156 RIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEG 215
++ + ++ + D E +I++ + G S Y +L + + + P ++ I G
Sbjct: 201 ELHKEMVES---EFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISG 257
Query: 216 FYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKP 275
F + + +VL M + P++ Y I LC K+ EA + + + G P
Sbjct: 258 FCEIGNYACMSEVLHTMI-AWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAP 316
Query: 276 NWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEIT 335
+ V ++ +I G+C +G L A+K++ +M K+G +P Y + H + G+
Sbjct: 317 DRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFY 376
Query: 336 KESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
E + G+ + ++ G K+D+A E+ K + E
Sbjct: 377 NEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSE 416
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 74/189 (39%), Gaps = 1/189 (0%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P + Y +IK + Y I + P+ V ++ I GF EK + +
Sbjct: 281 PSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGF-CEKGWLGSARK 339
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
L K GM P YNV I K S +A M+ G +S + +I G+C
Sbjct: 340 LWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFC 399
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
G DEA ++F +M + G P + Y L C+ E ++ KE G P+
Sbjct: 400 SHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGM 459
Query: 349 TMKKLVTGL 357
LV L
Sbjct: 460 AYAALVRNL 468
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 124/257 (48%), Gaps = 8/257 (3%)
Query: 125 MRD--EFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFA 182
+RD E +I P V + NAL+ A++ E ++ D + I PD TYN++I F
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKL-CDEMLHRCIFPDTVTYNSMIYGFC 412
Query: 183 ESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPAL 242
+ + M P+ VTF+ I+ + K+ +E ++L+ + + G+
Sbjct: 413 KHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR-GLVANT 467
Query: 243 STYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFAD 302
+TYN I C++ + A+ L Q MIS G P+ ++ + L++G+C L+EA ++F
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527
Query: 303 MKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSK 362
++ ++ Y + H +C+G + A+++ G P+ T +++G G S
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587
Query: 363 TDDAKELIKQVKEKFTE 379
DA L ++K+ E
Sbjct: 588 ISDANVLFHKMKDNGHE 604
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 14/224 (6%)
Query: 167 IQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVG 226
I ++ ++N +IK F + S S ++ + +P+ VTF+ + G E + E
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 227 KVLKMMEE--------------KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGG 272
+ M E + G++P + T+N I LC R EA AL+ M+ G
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 273 RKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAF 332
+ V++ +++G C G+ A + + M++ KP+ Y + LC+ G A
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 333 EITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+ E ++KG PN T ++ G + DA+ L++ + E+
Sbjct: 317 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 107/221 (48%), Gaps = 4/221 (1%)
Query: 132 TPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVY 191
+P V + N ++ AK E ++ + + + + TYNT+I F E + ++
Sbjct: 429 SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR-GLVANTTTYNTLIHGFCEVDNLNAAQ 487
Query: 192 SILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMME-EKYGMSPALSTYNVRIL 250
+ EM + V P+ +T + + GF +K EE ++ ++++ K + YN+ I
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTV--AYNIIIH 545
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
+CK + EA L + G +P+ +++ +I G+C + + +A +F MK G++P
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 605
Query: 311 ESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMK 351
++ Y TL + G+ + + E+ E G+ + T+K
Sbjct: 606 DNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK 646
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 101/228 (44%), Gaps = 2/228 (0%)
Query: 142 LFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNS 201
LF ++ + E ++ D + P V T+NT+I G +++++M
Sbjct: 198 LFGYMVETGFLEAVALF-DQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 202 VRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEA 261
+ + VT+ + G + +L MEE + + P + Y+ I LCK S+A
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH-IKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 262 KALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHF 321
+ L M+ G PN +++ +I G+C G +A+++ DM +R P+ + L
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375
Query: 322 LCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKEL 369
+ G A ++ E + + P+ T ++ G ++ DDAK +
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM 423
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 141/325 (43%), Gaps = 31/325 (9%)
Query: 72 KLKDGNH-FSTIDQ---FLRDLPTSRPDLRNERFLSQSIVLYGQARM-LPNAVTAFTRMR 126
KLK G+H F ++D F + SRP ++ I ++ RM P+ + R
Sbjct: 76 KLKSGSHYFKSLDDAIDFFDYMVRSRP-FYTAVDCNKVIGVF--VRMNRPDVAISLYRKM 132
Query: 127 DEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPK--NYSIQPDVETYNTVIKSFA-- 182
+ +I ++ S N L+ D ++S F K QPDV T+NT++
Sbjct: 133 EIRRIPLNIYSFNILIKCFC---DCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLE 189
Query: 183 --------------ESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
E+G +V ++ +M + P +TF+ I G E + E +
Sbjct: 190 DRISEALALFGYMVETGFLEAV-ALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAAL 248
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
+ M K G+ + TY + +CK+ T A LL M KP+ V +S +I C
Sbjct: 249 VNKMVGK-GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
+G+ +A+ +F++M ++G P Y + C G + A + ++ +++ P+
Sbjct: 308 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQV 373
T L++ V K +A++L ++
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEM 392
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 115/250 (46%), Gaps = 4/250 (1%)
Query: 124 RMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAE 183
R+ + I P V + ++ +++ +E ++ K ++PD Y T+I +F +
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK-MGLEPDALAYCTLIDAFCK 578
Query: 184 SGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLK-MMEEKYGMSPAL 242
+ + M RN + + + I + + E+ K ++E K M P +
Sbjct: 579 HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK--MEPDI 636
Query: 243 STYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFAD 302
TYN I C L+R EA+ + + + PN V+ + LIH C ++D A ++F+
Sbjct: 637 VTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSI 696
Query: 303 MKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSK 362
M ++G KP + Y L + + D E +F++ +E +KG P+ + ++ GL +
Sbjct: 697 MAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGR 756
Query: 363 TDDAKELIKQ 372
D+A + Q
Sbjct: 757 VDEATNIFHQ 766
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 1/206 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
I+PD+ Y+T+I + ++G + + S+ V+ + V FS+ I+ +
Sbjct: 316 GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATA 375
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
V K M + G+SP + TY + I LC+ R EA + ++ G +P+ V++S LI
Sbjct: 376 SVVYKRMLCQ-GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLID 434
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
G+C GNL ++ DM K GY P+ Y L L + G A + + + +
Sbjct: 435 GFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL 494
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIK 371
N L+ G +++ D+A ++ +
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFR 520
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 116/257 (45%), Gaps = 7/257 (2%)
Query: 125 MRDEFQITPSVKSLNALLFAALI-----AKDYKEVSRIYLDFPKNYSIQPDVETYNTVIK 179
MR ++ LN ++F +LI + E +++ Y I+PDV T+ TV++
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF-RLMGIYGIKPDVATFTTVMR 539
Query: 180 SFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMS 239
G + M + + P+A+ + I+ F K +G L + ++ +S
Sbjct: 540 VSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMK-PTIGLQLFDLMQRNKIS 598
Query: 240 PALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKV 299
++ NV I L K R +A +I G +P+ V+++ +I GYC LDEA+++
Sbjct: 599 ADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI 658
Query: 300 FADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVG 359
F +K + P + L H LC+ D + A + +KG PN T L+
Sbjct: 659 FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 718
Query: 360 VSKTDDAKELIKQVKEK 376
+ + +L ++++EK
Sbjct: 719 SVDIEGSFKLFEEMQEK 735
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 2/184 (1%)
Query: 128 EFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGST 187
E ++ P + + N ++ + E RI+ + K P+ T +I ++
Sbjct: 629 EGKMEPDIVTYNTMICGYCSLRRLDEAERIF-ELLKVTPFGPNTVTLTILIHVLCKNNDM 687
Query: 188 SSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNV 247
+ S M +PNAVT+ ++ F E K+ + M+EK G+SP++ +Y++
Sbjct: 688 DGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK-GISPSIVSYSI 746
Query: 248 RILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRG 307
I LCK R EA + I P+ V+++ LI GYC G L EA ++ M + G
Sbjct: 747 IIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 806
Query: 308 YKPE 311
KP+
Sbjct: 807 VKPD 810
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 106/229 (46%), Gaps = 15/229 (6%)
Query: 102 LSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDF 161
S +I +Y ++ L A + RM + I+P+V + L+ K + RIY F
Sbjct: 359 FSSTIDVYVKSGDLATASVVYKRMLCQ-GISPNVVTYTILI------KGLCQDGRIYEAF 411
Query: 162 PKNYSI-----QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGF 216
I +P + TY+++I F + G+ S +++ +M + P+ V + ++G
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471
Query: 217 YSEKKFEEVGKV-LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKP 275
+ + +KM+ + ++ + +N I C+L R EA + + M G KP
Sbjct: 472 SKQGLMLHAMRFSVKMLGQSIRLN--VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 276 NWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCE 324
+ +F+ ++ EG L+EA +F M K G +P++ Y TL C+
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCK 578
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 93/230 (40%), Gaps = 8/230 (3%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPK---NYSIQPDVETYNTVIKSFAESGST 187
I PS S + + AL K EV++ LDF + + + + N V+K +
Sbjct: 212 IEPSGVSAHGFVLDALFCK--GEVTKA-LDFHRLVMERGFRVGIVSCNKVLKGLSVD-QI 267
Query: 188 SSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNV 247
+LS + PN VTF I GF + + + K+ME++ G+ P L Y+
Sbjct: 268 EVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR-GIEPDLIAYST 326
Query: 248 RILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRG 307
I K L + G K + V FS I Y G+L A V+ M +G
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 308 YKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGL 357
P Y L LC+ G AF + + + +G P+ T L+ G
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGF 436
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 73/181 (40%), Gaps = 1/181 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
I P+V TY +IK + G + + ++ + + P+ VT+S+ I+GF
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS- 444
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
G L K G P + Y V + L K A M+ + N V F+ LI
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
G+C DEA KVF M G KP+ + T+ G E A + G P
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEP 564
Query: 346 N 346
+
Sbjct: 565 D 565
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 151/381 (39%), Gaps = 32/381 (8%)
Query: 19 NSSTPLTAKEKSRTALHLLKSETNPERILDICRAASLT---PDFHLDRIALSVAISKLKD 75
+SS + +++ T L LL E+ P L R A ++ P F+ ++A +++
Sbjct: 59 DSSVYGSNLQRNETNLVLLSLESEPNSALKYFRWAEISGKDPSFY------TIAHVLIRN 112
Query: 76 GNHFSTIDQFLRDLPTSRP--------------DLRNERFLSQSIVLYGQARMLPNAVTA 121
G F D+ ++ T+R D +FL + YG M+ A+
Sbjct: 113 G-MFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYG---MVDKALEI 168
Query: 122 FTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQP-DVETYNTVIKS 180
F + P L +LI D ++ + D I+P V + V+ +
Sbjct: 169 FVYSTQLGVVIPQDSVYRML--NSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDA 226
Query: 181 FAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSP 240
G + + R V+ + ++G S + E ++L ++ + G +P
Sbjct: 227 LFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLD-CGPAP 284
Query: 241 ALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVF 300
+ T+ I CK A L + M G +P+ +++S LI GY G L K+F
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 301 ADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGV 360
+ +G K + + + + GD +A + K + +G PN T L+ GL
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 361 SKTDDAKELIKQVKEKFTESS 381
+ +A + Q+ ++ E S
Sbjct: 405 GRIYEAFGMYGQILKRGMEPS 425
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 113/261 (43%), Gaps = 3/261 (1%)
Query: 115 LPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETY 174
LPN VT ++ + D V+ + +KD +V + + N S +P+V TY
Sbjct: 585 LPNIVT-YSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDN-SERPNVVTY 642
Query: 175 NTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE 234
++ F +S +L M PN + + I+G K +E +V M E
Sbjct: 643 GALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE 702
Query: 235 KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLD 294
+G L TY+ I K+KR A +L M+ PN V ++ +I G C G D
Sbjct: 703 -HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 761
Query: 295 EAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
EA K+ M+++G +P Y + G E+ E+ + KG PN+ T + L+
Sbjct: 762 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 821
Query: 355 TGLVGVSKTDDAKELIKQVKE 375
D A L++++K+
Sbjct: 822 DHCCKNGALDVAHNLLEEMKQ 842
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 121/284 (42%), Gaps = 19/284 (6%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
+ +A ++ A F MR E TP+V + AL+ A L AK + ++ +
Sbjct: 528 FCKAGLIEQARKWFNEMR-EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL- 585
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEM----------------DRNSVRPNAVTFSNA 212
P++ TY+ +I ++G I M D NS RPN VT+
Sbjct: 586 PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGAL 645
Query: 213 IEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGG 272
++GF + EE K+L M + G P Y+ I LCK+ + EA+ + M G
Sbjct: 646 LDGFCKSHRVEEARKLLDAMSME-GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Query: 273 RKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAF 332
++S LI Y D A KV + M + P Y + LC+ G + A+
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764
Query: 333 EITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
++ + +KG PN T ++ G + K + EL++++ K
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 7/212 (3%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
PD Y +I E+ L+ M S PN VT+S + G ++K+ +V
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
L MM + G P+ +N + + C S A LL+ M+ G P +V ++ LI C
Sbjct: 360 LNMMMME-GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC 418
Query: 289 WEGN------LDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
+ + LD A+K +++M G + LC G +E AF + +E + +G
Sbjct: 419 GDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG 478
Query: 343 WVPNFTTMKKLVTGLVGVSKTDDAKELIKQVK 374
++P+ +T K++ L SK + A L +++K
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 105/240 (43%), Gaps = 4/240 (1%)
Query: 119 VTAFTRMRDEFQITPSVKSLNALLFAALIAKDYK-EVSRIYLDFPKNYSIQPDVETYNTV 177
V + + D+ P+V + ALL K ++ E +R LD +P+ Y+ +
Sbjct: 623 VDMYFKQYDDNSERPNVVTYGALLDG--FCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 680
Query: 178 IKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYG 237
I + G + +EM + T+S+ I+ ++ K+ + KVL M E
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN-S 739
Query: 238 MSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAK 297
+P + Y I LCK+ +T EA L+Q M G +PN V+++ +I G+ G ++
Sbjct: 740 CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCL 799
Query: 298 KVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGL 357
++ M +G P Y L C+ G + A + +E W + +K++ G
Sbjct: 800 ELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF 859
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 127/326 (38%), Gaps = 48/326 (14%)
Query: 101 FLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLD 160
F ++ I +A + A+ RMR P+V + + LL L K R+ L+
Sbjct: 304 FYTKLISGLCEASLFEEAMDFLNRMRAT-SCLPNVVTYSTLLCGCLNKKQLGRCKRV-LN 361
Query: 161 FPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAI------- 213
P + +N+++ ++ SG S Y +L +M + P V ++ I
Sbjct: 362 MMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDK 421
Query: 214 -----------EGFYSE-----------------------KKFEEVGKVLKMMEEKYGMS 239
E YSE K+E+ V++ M + G
Sbjct: 422 DSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ-GFI 480
Query: 240 PALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKV 299
P STY+ + LC + A L + M GG + +++ ++ +C G +++A+K
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540
Query: 300 FADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVG 359
F +M++ G P Y L H + A E+ + + +G +PN T L+ G
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 360 VSKTDDAKELIKQVKEKFTESSDKWD 385
+ + A Q+ E+ S D D
Sbjct: 601 AGQVEKA----CQIFERMCGSKDVPD 622
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 94/240 (39%), Gaps = 36/240 (15%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
S P+V Y +I + G T Y ++ M+ +PN VT++ I+GF K E
Sbjct: 739 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETC 798
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
++L+ M K G++P TY V I CK A LL+ M + + +I
Sbjct: 799 LELLERMGSK-GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIE 857
Query: 286 GYCWE-----GNLDE-----------AKKVFADMKKRGYKPE------------------ 311
G+ E G LDE ++ D + + E
Sbjct: 858 GFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVD 917
Query: 312 -SPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELI 370
S Y +L LC E+AF++ E KG +P + L+ GL SK +A L+
Sbjct: 918 YSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 84/197 (42%), Gaps = 4/197 (2%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
K++ +P TYN +I++F ++ S I EM ++R + T YS K
Sbjct: 227 KDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFA---YSLCKV 283
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
+ + L ++E + P Y I LC+ EA L M + PN V++S
Sbjct: 284 GKWREALTLVETE-NFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYST 342
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
L+ G + L K+V M G P + +L H C GD A+++ K+ + G
Sbjct: 343 LLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCG 402
Query: 343 WVPNFTTMKKLVTGLVG 359
+P + L+ + G
Sbjct: 403 HMPGYVVYNILIGSICG 419
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 82/208 (39%), Gaps = 17/208 (8%)
Query: 179 KSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGM 238
+ +G +S++ EM P+ T+S + + K E + + M+ + G+
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK-RGGL 514
Query: 239 SPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKK 298
+ TY + + S CK +A+ M G PN V+++ LIH Y + A +
Sbjct: 515 VADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANE 574
Query: 299 VFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEI----------------TKESMDKG 342
+F M G P Y L C+ G E A +I K+ D
Sbjct: 575 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNS 634
Query: 343 WVPNFTTMKKLVTGLVGVSKTDDAKELI 370
PN T L+ G + ++A++L+
Sbjct: 635 ERPNVVTYGALLDGFCKSHRVEEARKLL 662
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 114/249 (45%), Gaps = 3/249 (1%)
Query: 129 FQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTS 188
FQ K+ N +L L E + L + +PD+ TYNT+I+ F +S +
Sbjct: 200 FQSCNDTKTFN-ILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELN 258
Query: 189 SVYSILSEMDRNSV-RPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNV 247
+ ++ SV P+ VT+++ I G+ K E +L M + G+ P T+NV
Sbjct: 259 KASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDML-RLGIYPTNVTFNV 317
Query: 248 RILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRG 307
+ K A+ + MIS G P+ V+F+ LI GYC G + + +++ +M RG
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG 377
Query: 308 YKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAK 367
P + Y L + LC A E+ + K +P ++ G K ++A
Sbjct: 378 MFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAN 437
Query: 368 ELIKQVKEK 376
+++++++K
Sbjct: 438 VIVEEMEKK 446
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 107/248 (43%), Gaps = 1/248 (0%)
Query: 129 FQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTS 188
F++ +N+LL L+ D E + D + D +T+N +I+ G
Sbjct: 165 FEVEGCCMVVNSLL-NTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAE 223
Query: 189 SVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVR 248
+L M P+ VT++ I+GF + + ++ K ++ SP + TY
Sbjct: 224 KALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSM 283
Query: 249 ILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGY 308
I CK + EA +LL M+ G P V+F+ L+ GY G + A+++ M G
Sbjct: 284 ISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGC 343
Query: 309 KPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKE 368
P+ + +L C G F + +E +G PN T L+ L ++ A+E
Sbjct: 344 FPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARE 403
Query: 369 LIKQVKEK 376
L+ Q+ K
Sbjct: 404 LLGQLASK 411
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 127/285 (44%), Gaps = 10/285 (3%)
Query: 94 PDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKE 153
PD+ L Q + ++ L A F ++ +P V + +++ A +E
Sbjct: 239 PDIVTYNTLIQG---FCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 154 VSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAI 213
S + LD I P T+N ++ +A++G + I +M P+ VTF++ I
Sbjct: 296 ASSL-LDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 214 EGFYSEKKFEEVGKVLKMMEE--KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISG 271
+G+ + +V + ++ EE GM P TY++ I +LC R +A+ LL + S
Sbjct: 355 DGYC---RVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
Query: 272 GRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESA 331
P ++ +I G+C G ++EA + +M+K+ KP+ + L C G A
Sbjct: 412 DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEA 471
Query: 332 FEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
I + + G P+ T+ L++ L+ +A L Q+ K
Sbjct: 472 VSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARK 515
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 114/249 (45%), Gaps = 3/249 (1%)
Query: 129 FQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTS 188
FQ K+ N +L L E + L + +PD+ TYNT+I+ F +S +
Sbjct: 200 FQSCNDTKTFN-ILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELN 258
Query: 189 SVYSILSEMDRNSV-RPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNV 247
+ ++ SV P+ VT+++ I G+ K E +L M + G+ P T+NV
Sbjct: 259 KASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDML-RLGIYPTNVTFNV 317
Query: 248 RILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRG 307
+ K A+ + MIS G P+ V+F+ LI GYC G + + +++ +M RG
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG 377
Query: 308 YKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAK 367
P + Y L + LC A E+ + K +P ++ G K ++A
Sbjct: 378 MFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAN 437
Query: 368 ELIKQVKEK 376
+++++++K
Sbjct: 438 VIVEEMEKK 446
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 107/248 (43%), Gaps = 1/248 (0%)
Query: 129 FQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTS 188
F++ +N+LL L+ D E + D + D +T+N +I+ G
Sbjct: 165 FEVEGCCMVVNSLL-NTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAE 223
Query: 189 SVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVR 248
+L M P+ VT++ I+GF + + ++ K ++ SP + TY
Sbjct: 224 KALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSM 283
Query: 249 ILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGY 308
I CK + EA +LL M+ G P V+F+ L+ GY G + A+++ M G
Sbjct: 284 ISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGC 343
Query: 309 KPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKE 368
P+ + +L C G F + +E +G PN T L+ L ++ A+E
Sbjct: 344 FPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARE 403
Query: 369 LIKQVKEK 376
L+ Q+ K
Sbjct: 404 LLGQLASK 411
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 127/285 (44%), Gaps = 10/285 (3%)
Query: 94 PDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKE 153
PD+ L Q + ++ L A F ++ +P V + +++ A +E
Sbjct: 239 PDIVTYNTLIQG---FCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 154 VSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAI 213
S + LD I P T+N ++ +A++G + I +M P+ VTF++ I
Sbjct: 296 ASSL-LDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 214 EGFYSEKKFEEVGKVLKMMEE--KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISG 271
+G+ + +V + ++ EE GM P TY++ I +LC R +A+ LL + S
Sbjct: 355 DGYC---RVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
Query: 272 GRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESA 331
P ++ +I G+C G ++EA + +M+K+ KP+ + L C G A
Sbjct: 412 DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEA 471
Query: 332 FEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
I + + G P+ T+ L++ L+ +A L Q+ K
Sbjct: 472 VSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARK 515
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 127/269 (47%), Gaps = 10/269 (3%)
Query: 45 RILDICRAASLTPDFHLDRIALSVAISKLKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQ 104
RI D + + P F+ V + L + FS D++L+ + L + +
Sbjct: 376 RIFDGFVSRGVKPGFN----GYLVLVQALLNAQRFSEGDRYLKQMGVD--GLLSSVYSYN 429
Query: 105 SIV-LYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPK 163
+++ +AR + NA T M+D I+P++ + N L + D K+V + L+
Sbjct: 430 AVIDCLCKARRIENAAMFLTEMQDR-GISPNLVTFNTFLSGYSVRGDVKKVHGV-LEKLL 487
Query: 164 NYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFE 223
+ +PDV T++ +I + + EM + PN +T++ I S +
Sbjct: 488 VHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTD 547
Query: 224 EVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHL 283
K+ M+E G+SP L YN I S CK+++ +A+ LL+ M+ G KP+ ++S L
Sbjct: 548 RSVKLFAKMKEN-GLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTL 606
Query: 284 IHGYCWEGNLDEAKKVFADMKKRGYKPES 312
I G EA+++F+ +++ G P+S
Sbjct: 607 IKALSESGRESEAREMFSSIERHGCVPDS 635
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 162/382 (42%), Gaps = 24/382 (6%)
Query: 1 MASRLRHSLRRYSTI----LSPNSSTPLTAKEKSRTALHLLKSETNPERILDICRAASLT 56
+A R+ +L++ + L+PN +T RT +H + P + ++ +
Sbjct: 262 IAGRVDEALKQLEMMRVRKLNPNEATI-------RTFVHGIFRCLPPCKAFEVL-VGFME 313
Query: 57 PDFHLDRIALSVAISKLKDGNHFSTIDQFLRDLPTSRPDLRNERF-LSQSIVLYGQARML 115
D +L R+ + L + + QFLR + + F + S +L G
Sbjct: 314 KDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHD--- 370
Query: 116 PNAVTAFTRMRDEF---QITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVE 172
+ R+ D F + P L+ A L A+ + E R YL + V
Sbjct: 371 ---LVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDR-YLKQMGVDGLLSSVY 426
Query: 173 TYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMM 232
+YN VI ++ + L+EM + PN VTF+ + G+ ++V VL+ +
Sbjct: 427 SYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKL 486
Query: 233 EEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGN 292
+G P + T+++ I LC+ K +A + M+ G +PN ++++ LI C G+
Sbjct: 487 L-VHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGD 545
Query: 293 LDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKK 352
D + K+FA MK+ G P+ Y C+ + A E+ K + G P+ T
Sbjct: 546 TDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYST 605
Query: 353 LVTGLVGVSKTDDAKELIKQVK 374
L+ L + +A+E+ ++
Sbjct: 606 LIKALSESGRESEAREMFSSIE 627
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 1/207 (0%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
PD T+N + + I V+P + ++ + ++F E +
Sbjct: 353 PDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRY 412
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
LK M G+ ++ +YN I LCK +R A L M G PN V+F+ + GY
Sbjct: 413 LKQMGVD-GLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYS 471
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
G++ + V + G+KP+ + + + LC + + AF+ KE ++ G PN
Sbjct: 472 VRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEI 531
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQVKE 375
T L+ TD + +L ++KE
Sbjct: 532 TYNILIRSCCSTGDTDRSVKLFAKMKE 558
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 3/224 (1%)
Query: 134 SVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSI 193
SV S NA++ A+ E + ++L ++ I P++ T+NT + ++ G V+ +
Sbjct: 424 SVYSYNAVIDCLCKARRI-ENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGV 482
Query: 194 LSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLC 253
L ++ + +P+ +TFS I K+ ++ K M E +G+ P TYN+ I S C
Sbjct: 483 LEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLE-WGIEPNEITYNILIRSCC 541
Query: 254 KLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESP 313
T + L M G P+ +++ I +C + +A+++ M + G KP++
Sbjct: 542 STGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNF 601
Query: 314 CYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGL 357
Y TL L E G A E+ G VP+ T K+LV L
Sbjct: 602 TYSTLIKALSESGRESEAREMFSSIERHGCVPDSYT-KRLVEEL 644
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 105/245 (42%), Gaps = 6/245 (2%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
+ PS + NA++ AL+ + +++ + ++ +PD TYN +I + G
Sbjct: 176 MKPSTRLYNAVI-DALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 191 YSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRIL 250
++ +M++ RPN T++ I+GF + +E K L+MM + ++P +T +
Sbjct: 235 IRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVR-KLNPNEATIRTFVH 293
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGN--LDEAKKVFADMKKRGY 308
+ + +A +L G + V + ++ YC N E + + +RGY
Sbjct: 294 GIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVL--YCLSNNSMAKETGQFLRKIGERGY 351
Query: 309 KPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKE 368
P+S + L +G D I + +G P F LV L+ + +
Sbjct: 352 IPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDR 411
Query: 369 LIKQV 373
+KQ+
Sbjct: 412 YLKQM 416
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 56/121 (46%)
Query: 237 GMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEA 296
GM P+ YN I +L K A Q M S G KP+ +++ LIHG C +G +DEA
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 297 KKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTG 356
++ M++ G +P Y L G + A + + + PN T++ V G
Sbjct: 235 IRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHG 294
Query: 357 L 357
+
Sbjct: 295 I 295
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 1/211 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
+ P+ YNT+I + G + M++ ++P+ + ++ I F + E
Sbjct: 384 GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENA 443
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
K + M+ K G+SP++ TYN+ I + + +L+ M G PN VS+ LI+
Sbjct: 444 EKEVNKMKLK-GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLIN 502
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
C L EA+ V DM+ RG P+ Y L C G E AF +KE + KG
Sbjct: 503 CLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIEL 562
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
N T L+ GL K +A++L+ ++ K
Sbjct: 563 NLVTYNTLIDGLSMTGKLSEAEDLLLEISRK 593
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 123/255 (48%), Gaps = 14/255 (5%)
Query: 130 QITPSVKSLNALLFAALIA----KDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESG 185
++ PS+ + N L+ A K +K R+ D I+P + T+NT++K ++G
Sbjct: 244 RLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKAD-----HIEPSLITFNTLLKGLFKAG 298
Query: 186 STSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTY 245
++L EM P+A TFS +G+ S +K E L + E ++ Y
Sbjct: 299 MVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAE---AALGVYETAVDSGVKMNAY 355
Query: 246 NVRIL--SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADM 303
IL +LCK + +A+ +L ++ G PN V ++ +I GYC +G+L A+ M
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAM 415
Query: 304 KKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKT 363
+K+G KP+ Y L CE G+ E+A + + KG P+ T L+ G +
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEF 475
Query: 364 DDAKELIKQVKEKFT 378
D +++K++++ T
Sbjct: 476 DKCFDILKEMEDNGT 490
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 6/204 (2%)
Query: 152 KEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSN 211
KEV+++ L + P VETYN +I + + IL EM+ N PN V++
Sbjct: 445 KEVNKMKLK-----GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGT 499
Query: 212 AIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISG 271
I K E V + ME++ G+SP + YN+ I C + +A + M+
Sbjct: 500 LINCLCKGSKLLEAQIVKRDMEDR-GVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKK 558
Query: 272 GRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESA 331
G + N V+++ LI G G L EA+ + ++ ++G KP+ Y +L G+ +
Sbjct: 559 GIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRC 618
Query: 332 FEITKESMDKGWVPNFTTMKKLVT 355
+ +E G P T L++
Sbjct: 619 IALYEEMKRSGIKPTLKTYHLLIS 642
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 127/290 (43%), Gaps = 36/290 (12%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
++PSV++ N L+ ++ + I + N ++ P+V +Y T+I +
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTM-PNVVSYGTLINCLCKGSKLLEA 513
Query: 191 YSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRIL 250
+ +M+ V P ++ I+G S+ K E+ + K M +K G+ L TYN I
Sbjct: 514 QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKK-GIELNLVTYNTLID 572
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
L + SEA+ LL + G KP+ +++ LI GY + GN+ ++ +MK+ G KP
Sbjct: 573 GLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKP 632
Query: 311 ESPCYFTLAHFLC--EG------------------------------GDFESAFEITKES 338
Y L LC EG GD E AF + K+
Sbjct: 633 TLKTYHLLIS-LCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQM 691
Query: 339 MDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTE-SSDKWDEI 387
++K + TT L+ G + V K + + LI ++ + E +D ++ I
Sbjct: 692 IEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNII 741
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 1/202 (0%)
Query: 155 SRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIE 214
+R+ ++ + ++PD YN +I+ F E G + +++M V P+ T++ I
Sbjct: 408 ARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIG 467
Query: 215 GFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRK 274
G+ + +F++ +LK ME+ G P + +Y I LCK + EA+ + + M G
Sbjct: 468 GYGRKYEFDKCFDILKEMEDN-GTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVS 526
Query: 275 PNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEI 334
P ++ LI G C +G +++A + +M K+G + Y TL L G A ++
Sbjct: 527 PKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDL 586
Query: 335 TKESMDKGWVPNFTTMKKLVTG 356
E KG P+ T L++G
Sbjct: 587 LLEISRKGLKPDVFTYNSLISG 608
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 121/284 (42%), Gaps = 42/284 (14%)
Query: 75 DGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPS 134
D F++ + S P L+++ VL +++M+ A F +R+E I PS
Sbjct: 85 DSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNE-GIYPS 143
Query: 135 VKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSIL 194
SL LL + K ++ ++L+ ++ D
Sbjct: 144 SDSLTLLLDHLVKTKQFRVTINVFLNI-----LESD------------------------ 174
Query: 195 SEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYG--MSPALSTYNVRILSL 252
RP+ + AI+ + K +VGK L++ + P++ YNV I L
Sbjct: 175 -------FRPSKFMYGKAIQ---AAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGL 224
Query: 253 CKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPES 312
CK KR ++A+ L M++ P+ ++++ LI GYC GN +++ KV MK +P
Sbjct: 225 CKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSL 284
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTG 356
+ TL L + G E A + KE D G+VP+ T L G
Sbjct: 285 ITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDG 328
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 114/267 (42%), Gaps = 9/267 (3%)
Query: 111 QARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPD 170
+A M+ +A M+D P + ++LF + + E + + + ++ +
Sbjct: 296 KAGMVEDAENVLKEMKD-LGFVPDAFTF-SILFDGYSSNEKAEAALGVYETAVDSGVKMN 353
Query: 171 VETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLK 230
T + ++ + + G IL + PN V ++ I+G+ +K + VG +K
Sbjct: 354 AYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYC--RKGDLVGARMK 411
Query: 231 M-MEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW 289
+ EK GM P YN I C+L A+ + M G P+ +++ LI GY
Sbjct: 412 IEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGR 471
Query: 290 EGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTT 349
+ D+ + +M+ G P Y TL + LC+G A + ++ D+G P
Sbjct: 472 KYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRI 531
Query: 350 MKKLVTGLVGVSKTDDA----KELIKQ 372
L+ G K +DA KE++K+
Sbjct: 532 YNMLIDGCCSKGKIEDAFRFSKEMLKK 558
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 125/280 (44%), Gaps = 45/280 (16%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
++P V+ N L+ ++ R + K I+ ++ TYNT+I + +G S
Sbjct: 525 VSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKK-GIELNLVTYNTLIDGLSMTGKLSEA 583
Query: 191 YSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE--KYGMSPALSTYNVR 248
+L E+ R ++P+ T+++ I G+ V + + + EE + G+ P L TY++
Sbjct: 584 EDLLLEISRKGLKPDVFTYNSLISGYGFAGN---VQRCIALYEEMKRSGIKPTLKTYHL- 639
Query: 249 ILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLD-------------- 294
++SLC K E L G +S KP+ + ++ ++H Y G+++
Sbjct: 640 LISLCT-KEGIELTERLFGEMS--LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSI 696
Query: 295 ---------------------EAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFE 333
E + + +M R +PE+ Y + CE D+ SA+
Sbjct: 697 GLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYV 756
Query: 334 ITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
+E +KG++ + +LV+GL ++ +A+ +I ++
Sbjct: 757 WYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 118/259 (45%), Gaps = 2/259 (0%)
Query: 115 LPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETY 174
L A RM+ E + P+ + N L+ A E ++ + K I+P+V T
Sbjct: 386 LKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKL-ETAKEVVSRMKEDEIKPNVVTV 444
Query: 175 NTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE 234
NT++ + +M++ V+ N VT+ I S E+ + M E
Sbjct: 445 NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE 504
Query: 235 KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLD 294
G SP Y I LC+++R +A +++ + GG + ++++ LI +C + N +
Sbjct: 505 A-GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAE 563
Query: 295 EAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
+ ++ DM+K G KP+S Y TL F + DFES + ++ + G P TT ++
Sbjct: 564 KVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVI 623
Query: 355 TGLVGVSKTDDAKELIKQV 373
V + D+A +L K +
Sbjct: 624 DAYCSVGELDEALKLFKDM 642
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 6/215 (2%)
Query: 167 IQPDVETYNTVIKSFAESGSTSSVYSILSEM------DRNSVRPNAVTFSNAIEGFYSEK 220
I+PDV T +I + +S + +M D N ++ +++ F+ I+G
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 221 KFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSF 280
+ +E ++L M+ + P TYN I C+ + AK ++ M KPN V+
Sbjct: 385 RLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 281 SHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMD 340
+ ++ G C L+ A F DM+K G K Y TL H C + E A ++ ++
Sbjct: 445 NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE 504
Query: 341 KGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
G P+ L++GL V + DA +++++KE
Sbjct: 505 AGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKE 539
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 86/172 (50%), Gaps = 2/172 (1%)
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL 229
D+ YN +I F + + VY +L++M++ +P+++T++ I F K FE V +++
Sbjct: 545 DLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMM 604
Query: 230 KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGM-ISGGRKPNWVSFSHLIHGYC 288
+ M E G+ P ++TY I + C + EA L + M + PN V ++ LI+ +
Sbjct: 605 EQMRED-GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFS 663
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMD 340
GN +A + +MK + +P Y L L E E+ ++ E ++
Sbjct: 664 KLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 119/288 (41%), Gaps = 9/288 (3%)
Query: 93 RPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALI----- 147
RPD+ L ++ ++R + A+ F +MR + +V +++ F LI
Sbjct: 326 RPDVVTLGILINTLC---KSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCK 382
Query: 148 AKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAV 207
KE + + P+ TYN +I + +G + ++S M + ++PN V
Sbjct: 383 VGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVV 442
Query: 208 TFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQG 267
T + + G + V M EK G+ + TY I + C + +A +
Sbjct: 443 TVNTIVGGMCRHHGLN-MAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEK 501
Query: 268 MISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGD 327
M+ G P+ + LI G C +A +V +K+ G+ + Y L C+ +
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN 561
Query: 328 FESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
E +E+ + +G P+ T L++ + + +++Q++E
Sbjct: 562 AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRE 609
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 95/223 (42%), Gaps = 7/223 (3%)
Query: 127 DEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYS-----IQPDVETYNTVIKSF 181
DE +I P V +L L+ ++ E ++ + I+ D +NT+I
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGL 380
Query: 182 AESGSTSSVYSILSEMD-RNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSP 240
+ G +L M PNAVT++ I+G+ K E +V+ M+E + P
Sbjct: 381 CKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED-EIKP 439
Query: 241 ALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVF 300
+ T N + +C+ + A M G K N V++ LIH C N+++A +
Sbjct: 440 NVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWY 499
Query: 301 ADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGW 343
M + G P++ Y+ L LC+ A + ++ + G+
Sbjct: 500 EKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF 542
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 84/178 (47%), Gaps = 9/178 (5%)
Query: 59 FHLDRIALSVAISKLKDGNHFSTIDQFLRDLPTS--RPDLRNERFLSQSIVLYGQARMLP 116
F LD +A ++ I D N+ + + L D+ +PD L I +G+ +
Sbjct: 542 FSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTL---ISFFGKHKDFE 598
Query: 117 NAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNT 176
+ +MR++ + P+V + A++ A + E +++ D + + P+ YN
Sbjct: 599 SVERMMEQMRED-GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Query: 177 VIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE 234
+I +F++ G+ S+ EM VRPN T+ NA+ +EK E +LK+M+E
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETY-NALFKCLNEKTQGET--LLKLMDE 712
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 10/178 (5%)
Query: 115 LPNAVTAFTRMRDEFQITPSVK----SLNALLFAALIA-----KDYKEVSRIYLDFPKNY 165
L + + R D ++ +K SL+ L + LI + ++V + D K
Sbjct: 517 LISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEG 576
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
+PD TYNT+I F + SV ++ +M + + P T+ I+ + S + +E
Sbjct: 577 K-KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEA 635
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHL 283
K+ K M ++P YN+ I + KL +A +L + M +PN +++ L
Sbjct: 636 LKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 118/259 (45%), Gaps = 2/259 (0%)
Query: 115 LPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETY 174
L A RM+ E + P+ + N L+ A E ++ + K I+P+V T
Sbjct: 386 LKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKL-ETAKEVVSRMKEDEIKPNVVTV 444
Query: 175 NTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE 234
NT++ + +M++ V+ N VT+ I S E+ + M E
Sbjct: 445 NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE 504
Query: 235 KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLD 294
G SP Y I LC+++R +A +++ + GG + ++++ LI +C + N +
Sbjct: 505 A-GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAE 563
Query: 295 EAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
+ ++ DM+K G KP+S Y TL F + DFES + ++ + G P TT ++
Sbjct: 564 KVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVI 623
Query: 355 TGLVGVSKTDDAKELIKQV 373
V + D+A +L K +
Sbjct: 624 DAYCSVGELDEALKLFKDM 642
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 6/215 (2%)
Query: 167 IQPDVETYNTVIKSFAESGSTSSVYSILSEM------DRNSVRPNAVTFSNAIEGFYSEK 220
I+PDV T +I + +S + +M D N ++ +++ F+ I+G
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 221 KFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSF 280
+ +E ++L M+ + P TYN I C+ + AK ++ M KPN V+
Sbjct: 385 RLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 281 SHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMD 340
+ ++ G C L+ A F DM+K G K Y TL H C + E A ++ ++
Sbjct: 445 NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE 504
Query: 341 KGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
G P+ L++GL V + DA +++++KE
Sbjct: 505 AGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKE 539
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 96/191 (50%), Gaps = 2/191 (1%)
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL 229
D+ YN +I F + + VY +L++M++ +P+++T++ I F K FE V +++
Sbjct: 545 DLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMM 604
Query: 230 KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGM-ISGGRKPNWVSFSHLIHGYC 288
+ M E G+ P ++TY I + C + EA L + M + PN V ++ LI+ +
Sbjct: 605 EQMRED-GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFS 663
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
GN +A + +MK + +P Y L L E E+ ++ E +++ PN
Sbjct: 664 KLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQI 723
Query: 349 TMKKLVTGLVG 359
TM+ L+ L G
Sbjct: 724 TMEILMERLSG 734
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 119/288 (41%), Gaps = 9/288 (3%)
Query: 93 RPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALI----- 147
RPD+ L ++ ++R + A+ F +MR + +V +++ F LI
Sbjct: 326 RPDVVTLGILINTLC---KSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCK 382
Query: 148 AKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAV 207
KE + + P+ TYN +I + +G + ++S M + ++PN V
Sbjct: 383 VGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVV 442
Query: 208 TFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQG 267
T + + G + V M EK G+ + TY I + C + +A +
Sbjct: 443 TVNTIVGGMCRHHGLN-MAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEK 501
Query: 268 MISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGD 327
M+ G P+ + LI G C +A +V +K+ G+ + Y L C+ +
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN 561
Query: 328 FESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
E +E+ + +G P+ T L++ + + +++Q++E
Sbjct: 562 AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRE 609
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 95/223 (42%), Gaps = 7/223 (3%)
Query: 127 DEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYS-----IQPDVETYNTVIKSF 181
DE +I P V +L L+ ++ E ++ + I+ D +NT+I
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGL 380
Query: 182 AESGSTSSVYSILSEMD-RNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSP 240
+ G +L M PNAVT++ I+G+ K E +V+ M+E + P
Sbjct: 381 CKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED-EIKP 439
Query: 241 ALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVF 300
+ T N + +C+ + A M G K N V++ LIH C N+++A +
Sbjct: 440 NVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWY 499
Query: 301 ADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGW 343
M + G P++ Y+ L LC+ A + ++ + G+
Sbjct: 500 EKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF 542
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 84/178 (47%), Gaps = 9/178 (5%)
Query: 59 FHLDRIALSVAISKLKDGNHFSTIDQFLRDLPTS--RPDLRNERFLSQSIVLYGQARMLP 116
F LD +A ++ I D N+ + + L D+ +PD L I +G+ +
Sbjct: 542 FSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTL---ISFFGKHKDFE 598
Query: 117 NAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNT 176
+ +MR++ + P+V + A++ A + E +++ D + + P+ YN
Sbjct: 599 SVERMMEQMRED-GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Query: 177 VIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE 234
+I +F++ G+ S+ EM VRPN T+ NA+ +EK E +LK+M+E
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETY-NALFKCLNEKTQGET--LLKLMDE 712
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 118/259 (45%), Gaps = 2/259 (0%)
Query: 115 LPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETY 174
L A RM+ E + P+ + N L+ A E ++ + K I+P+V T
Sbjct: 386 LKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKL-ETAKEVVSRMKEDEIKPNVVTV 444
Query: 175 NTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE 234
NT++ + +M++ V+ N VT+ I S E+ + M E
Sbjct: 445 NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE 504
Query: 235 KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLD 294
G SP Y I LC+++R +A +++ + GG + ++++ LI +C + N +
Sbjct: 505 A-GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTE 563
Query: 295 EAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
+ ++ DM+K G KP+S Y TL F + DFES + ++ + G P TT ++
Sbjct: 564 KVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVI 623
Query: 355 TGLVGVSKTDDAKELIKQV 373
V + D+A +L K +
Sbjct: 624 DAYCSVGELDEALKLFKDM 642
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 6/215 (2%)
Query: 167 IQPDVETYNTVIKSFAESGSTSSVYSILSEM------DRNSVRPNAVTFSNAIEGFYSEK 220
I+PDV T +I + +S + +M D N ++ +++ F+ I+G
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 221 KFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSF 280
+ +E ++L M+ + +P TYN I C+ + AK ++ M KPN V+
Sbjct: 385 RLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 281 SHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMD 340
+ ++ G C L+ A F DM+K G K Y TL H C + E A ++ ++
Sbjct: 445 NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE 504
Query: 341 KGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
G P+ L++GL V + DA +++++KE
Sbjct: 505 AGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKE 539
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 97/191 (50%), Gaps = 2/191 (1%)
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL 229
D+ YN +I F + +T VY +L++M++ +P+++T++ I F K FE V +++
Sbjct: 545 DLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMM 604
Query: 230 KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGM-ISGGRKPNWVSFSHLIHGYC 288
+ M E G+ P ++TY I + C + EA L + M + PN V ++ LI+ +
Sbjct: 605 EQMRED-GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFS 663
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
GN +A + +MK + +P Y L L E E+ ++ E +++ PN
Sbjct: 664 KLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQI 723
Query: 349 TMKKLVTGLVG 359
TM+ L+ L G
Sbjct: 724 TMEILMERLSG 734
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 119/288 (41%), Gaps = 9/288 (3%)
Query: 93 RPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALI----- 147
RPD+ L ++ ++R + A+ F +MR + +V +++ F LI
Sbjct: 326 RPDVVTLGILINTLC---KSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCK 382
Query: 148 AKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAV 207
KE + + P+ TYN +I + +G + ++S M + ++PN V
Sbjct: 383 VGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVV 442
Query: 208 TFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQG 267
T + + G + V M EK G+ + TY I + C + +A +
Sbjct: 443 TVNTIVGGMCRHHGLN-MAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEK 501
Query: 268 MISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGD 327
M+ G P+ + LI G C +A +V +K+ G+ + Y L C+ +
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN 561
Query: 328 FESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
E +E+ + +G P+ T L++ + + +++Q++E
Sbjct: 562 TEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRE 609
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 108/256 (42%), Gaps = 7/256 (2%)
Query: 127 DEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYS-----IQPDVETYNTVIKSF 181
DE +I P V +L L+ ++ E ++ + I+ D +NT+I
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGL 380
Query: 182 AESGSTSSVYSILSEMD-RNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSP 240
+ G +L M PNAVT++ I+G+ K E +V+ M+E + P
Sbjct: 381 CKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED-EIKP 439
Query: 241 ALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVF 300
+ T N + +C+ + A M G K N V++ LIH C N+++A +
Sbjct: 440 NVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWY 499
Query: 301 ADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGV 360
M + G P++ Y+ L LC+ A + ++ + G+ + L+
Sbjct: 500 EKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDK 559
Query: 361 SKTDDAKELIKQVKEK 376
+ T+ E++ ++++
Sbjct: 560 NNTEKVYEMLTDMEKE 575
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 84/178 (47%), Gaps = 9/178 (5%)
Query: 59 FHLDRIALSVAISKLKDGNHFSTIDQFLRDLPTS--RPDLRNERFLSQSIVLYGQARMLP 116
F LD +A ++ I D N+ + + L D+ +PD L I +G+ +
Sbjct: 542 FSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTL---ISFFGKHKDFE 598
Query: 117 NAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNT 176
+ +MR++ + P+V + A++ A + E +++ D + + P+ YN
Sbjct: 599 SVERMMEQMRED-GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Query: 177 VIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE 234
+I +F++ G+ S+ EM VRPN T+ NA+ +EK E +LK+M+E
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETY-NALFKCLNEKTQGET--LLKLMDE 712
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 84/169 (49%), Gaps = 1/169 (0%)
Query: 190 VYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRI 249
+ + S M R + PN TF+ F ++ F EV L+ MEE+ G P L TYN +
Sbjct: 220 CWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEE-GFEPDLVTYNTLV 278
Query: 250 LSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYK 309
S C+ R EA L + M P+ V+++ LI G C +G + EA + F M RG K
Sbjct: 279 SSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIK 338
Query: 310 PESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLV 358
P+ Y TL + C+ G + + ++ E + VP+ T K +V G V
Sbjct: 339 PDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFV 387
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 123/303 (40%), Gaps = 47/303 (15%)
Query: 94 PDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKE 153
PDL L + + G+ R A F RM D I P S N L++A ++
Sbjct: 304 PDLVTYTSLIKGLCKDGRVR---EAHQTFHRMVDR-GIKPDCMSYNTLIYAYCKEGMMQQ 359
Query: 154 VSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSV----------- 202
++ + N S+ PD T +++ F G S + + E+ R V
Sbjct: 360 SKKLLHEMLGN-SVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLI 418
Query: 203 -------RPNAV------------------TFSNAIEGFYSEKKFEEVGKVLKMMEEKYG 237
+P A T++N IE EE VLK +
Sbjct: 419 VSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEE-ALVLKGKLKNQN 477
Query: 238 MSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAK 297
TY I LC++ R EA++L+ M KP+ L++GYC E + D+A+
Sbjct: 478 QVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAE 537
Query: 298 KVFA--DMKKRGYKPESPCYFTLAHFLCE-GGDFESAFEITKESMDKGWVPNFTTMKKLV 354
++ + M+ R + PES Y +L +CE G ++ A E+ + G+VPN T K L+
Sbjct: 538 RLLSLFAMEFRIFDPES--YNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLI 595
Query: 355 TGL 357
L
Sbjct: 596 QVL 598
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 90/214 (42%), Gaps = 4/214 (1%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKK-FEE 224
I+PD +YNT+I ++ + G +L EM NSV P+ T +EGF E +
Sbjct: 336 GIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSA 395
Query: 225 VGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMI-SGGRKPNWVSFSHL 283
V V+++ K + + I+SLC+ + AK LL +I G + ++++L
Sbjct: 396 VNFVVELRRLKVDI--PFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNL 453
Query: 284 IHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGW 343
I ++EA + +K + ++ Y L LC G A + E D
Sbjct: 454 IESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEV 513
Query: 344 VPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKF 377
P+ LV G D A+ L+ +F
Sbjct: 514 KPDSFICGALVYGYCKELDFDKAERLLSLFAMEF 547
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 1/172 (0%)
Query: 205 NAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKAL 264
+ V F ++G+ EE +V + + + G S ++ T N + L KL + +
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDS-GFSVSVVTCNHLLNGLLKLDLMEDCWQV 223
Query: 265 LQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCE 324
M G PN +F+ L + +C + N E M++ G++P+ Y TL C
Sbjct: 224 YSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCR 283
Query: 325 GGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
G + AF + K + VP+ T L+ GL + +A + ++ ++
Sbjct: 284 RGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDR 335
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 119/260 (45%), Gaps = 15/260 (5%)
Query: 125 MRDEFQITPSVKSLNALLFAALI-----AKDYKEVSRIYLDFPKNYSIQPDVETYNTVIK 179
MR ++ LN ++F +LI + E +++ Y I+PDV T+ TV++
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF-RLMGIYGIKPDVATFTTVMR 539
Query: 180 ------SFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLK-MM 232
+F + + + M RN + + + I + + E+ K ++
Sbjct: 540 VSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 599
Query: 233 EEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGN 292
E K M P + TYN I C L+R EA+ + + + PN V+ + LIH C +
Sbjct: 600 EGK--MEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 657
Query: 293 LDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKK 352
+D A ++F+ M ++G KP + Y L + + D E +F++ +E +KG P+ +
Sbjct: 658 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 717
Query: 353 LVTGLVGVSKTDDAKELIKQ 372
++ GL + D+A + Q
Sbjct: 718 IIDGLCKRGRVDEATNIFHQ 737
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 1/206 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
I+PD+ Y+T+I + ++G + + S+ V+ + V FS+ I+ +
Sbjct: 316 GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATA 375
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
V K M + G+SP + TY + I LC+ R EA + ++ G +P+ V++S LI
Sbjct: 376 SVVYKRMLCQ-GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLID 434
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
G+C GNL ++ DM K GY P+ Y L L + G A + + + +
Sbjct: 435 GFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL 494
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIK 371
N L+ G +++ D+A ++ +
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFR 520
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 139/356 (39%), Gaps = 69/356 (19%)
Query: 80 STIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQ--------- 130
STID +++ + + +R L Q I PN VT ++ Q
Sbjct: 361 STIDVYVKSGDLATASVVYKRMLCQGIS--------PNVVTYTILIKGLCQDGRIYEAFG 412
Query: 131 ---------ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSF 181
+ PS+ + ++L+ + + +Y D K PDV Y ++
Sbjct: 413 MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK-MGYPPDVVIYGVLVDGL 471
Query: 182 AESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPA 241
++ G +M S+R N V F++ I+G+ +F+E KV ++M YG+ P
Sbjct: 472 SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG-IYGIKPD 530
Query: 242 LSTY-----------------------------------------NVRILSLCKLKRTSE 260
++T+ NV I L K R +
Sbjct: 531 VATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIED 590
Query: 261 AKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAH 320
A +I G +P+ V+++ +I GYC LDEA+++F +K + P + L H
Sbjct: 591 ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIH 650
Query: 321 FLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
LC+ D + A + +KG PN T L+ + + +L ++++EK
Sbjct: 651 VLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK 706
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 2/184 (1%)
Query: 128 EFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGST 187
E ++ P + + N ++ + E RI+ + K P+ T +I ++
Sbjct: 600 EGKMEPDIVTYNTMICGYCSLRRLDEAERIF-ELLKVTPFGPNTVTLTILIHVLCKNNDM 658
Query: 188 SSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNV 247
+ S M +PNAVT+ ++ F E K+ + M+EK G+SP++ +Y++
Sbjct: 659 DGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK-GISPSIVSYSI 717
Query: 248 RILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRG 307
I LCK R EA + I P+ V+++ LI GYC G L EA ++ M + G
Sbjct: 718 IIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 777
Query: 308 YKPE 311
KP+
Sbjct: 778 VKPD 781
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/265 (19%), Positives = 111/265 (41%), Gaps = 8/265 (3%)
Query: 124 RMRDEFQITPSVKSLNALLFAALIAKDYKE-----VSRIYLDFPKNYSIQPDVETYNTVI 178
R+ + I P V + ++ +++ + + + D + I D+ N VI
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVI 579
Query: 179 KSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMME-EKYG 237
+ + + + P+ VT++ I G+ S ++ +E ++ ++++ +G
Sbjct: 580 HLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFG 639
Query: 238 MSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAK 297
P T + I LCK A + M G KPN V++ L+ + +++ +
Sbjct: 640 --PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 697
Query: 298 KVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGL 357
K+F +M+++G P Y + LC+ G + A I +++D +P+ L+ G
Sbjct: 698 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGY 757
Query: 358 VGVSKTDDAKELIKQVKEKFTESSD 382
V + +A L + + + D
Sbjct: 758 CKVGRLVEAALLYEHMLRNGVKPDD 782
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 93/230 (40%), Gaps = 8/230 (3%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPK---NYSIQPDVETYNTVIKSFAESGST 187
I PS S + + AL K EV++ LDF + + + + N V+K +
Sbjct: 212 IEPSGVSAHGFVLDALFCK--GEVTKA-LDFHRLVMERGFRVGIVSCNKVLKGLSVD-QI 267
Query: 188 SSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNV 247
+LS + PN VTF I GF + + + K+ME++ G+ P L Y+
Sbjct: 268 EVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR-GIEPDLIAYST 326
Query: 248 RILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRG 307
I K L + G K + V FS I Y G+L A V+ M +G
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 308 YKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGL 357
P Y L LC+ G AF + + + +G P+ T L+ G
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGF 436
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 75/192 (39%), Gaps = 44/192 (22%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
++ DV +++ I + +SG ++ + M + PN VT++ I+G + + E
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 226 ----GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKP------ 275
G++LK GM P++ TY+ I CK AL + MI G P
Sbjct: 411 FGMYGQILK-----RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYG 465
Query: 276 -----------------------------NWVSFSHLIHGYCWEGNLDEAKKVFADMKKR 306
N V F+ LI G+C DEA KVF M
Sbjct: 466 VLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 307 GYKPESPCYFTL 318
G KP+ + T+
Sbjct: 526 GIKPDVATFTTV 537
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 151/381 (39%), Gaps = 32/381 (8%)
Query: 19 NSSTPLTAKEKSRTALHLLKSETNPERILDICRAASLT---PDFHLDRIALSVAISKLKD 75
+SS + +++ T L LL E+ P L R A ++ P F+ ++A +++
Sbjct: 59 DSSVYGSNLQRNETNLVLLSLESEPNSALKYFRWAEISGKDPSFY------TIAHVLIRN 112
Query: 76 GNHFSTIDQFLRDLPTSRP--------------DLRNERFLSQSIVLYGQARMLPNAVTA 121
G F D+ ++ T+R D +FL + YG M+ A+
Sbjct: 113 G-MFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYG---MVDKALEI 168
Query: 122 FTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQP-DVETYNTVIKS 180
F + P L +LI D ++ + D I+P V + V+ +
Sbjct: 169 FVYSTQLGVVIPQDSVYRML--NSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDA 226
Query: 181 FAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSP 240
G + + R V+ + ++G S + E ++L ++ + G +P
Sbjct: 227 LFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLD-CGPAP 284
Query: 241 ALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVF 300
+ T+ I CK A L + M G +P+ +++S LI GY G L K+F
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 301 ADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGV 360
+ +G K + + + + GD +A + K + +G PN T L+ GL
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 361 SKTDDAKELIKQVKEKFTESS 381
+ +A + Q+ ++ E S
Sbjct: 405 GRIYEAFGMYGQILKRGMEPS 425
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 118/243 (48%), Gaps = 12/243 (4%)
Query: 134 SVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSI 193
SV ++ F AL +D E S + P++ TYN+ I F+ G +
Sbjct: 246 SVYCKKSMHFEALSVQDRMERS----------GVAPNIVTYNSFIHGFSREGRMREATRL 295
Query: 194 LSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLC 253
E+ ++ V N VT++ I+G+ +E ++ ++ME + G SP + TYN + LC
Sbjct: 296 FREI-KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESR-GFSPGVVTYNSILRKLC 353
Query: 254 KLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESP 313
+ R EA LL M +P+ ++ + LI+ YC ++ A KV M + G K +
Sbjct: 354 EDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMY 413
Query: 314 CYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
Y L H C+ + E+A E ++KG+ P + T LV G +K D+ +L+++
Sbjct: 414 SYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEF 473
Query: 374 KEK 376
+++
Sbjct: 474 EKR 476
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 113/256 (44%), Gaps = 24/256 (9%)
Query: 116 PNAVT------AFTR---MRDEFQITPSVK---SLNALLFAALI-----AKDYKEVSRIY 158
PN VT F+R MR+ ++ +K + N + + LI D E R+
Sbjct: 271 PNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLR 330
Query: 159 LDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYS 218
+ ++ P V TYN++++ E G +L+EM + P+ +T + I +
Sbjct: 331 -EVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCK 389
Query: 219 EKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWV 278
+ KV K M E G+ + +Y I CK+ AK L MI G P +
Sbjct: 390 IEDMVSAVKVKKKMIES-GLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYA 448
Query: 279 SFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKES 338
++S L+ G+ + DE K+ + +KRG + Y L +C+ + A ++ ES
Sbjct: 449 TYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYA-KVLFES 507
Query: 339 MD-KGWVPN---FTTM 350
M+ KG V + FTTM
Sbjct: 508 MEKKGLVGDSVIFTTM 523
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 96/217 (44%), Gaps = 2/217 (0%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
++ ++P ++ ++ S + T +V+ I +M + V N ++ +
Sbjct: 160 RSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDP 219
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
E+ K+L MEEK G+ P + TYN I CK EA ++ M G PN V+++
Sbjct: 220 EKAEKLLSEMEEK-GVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNS 278
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
IHG+ EG + EA ++F ++K Y TL C D + A + + +G
Sbjct: 279 FIHGFSREGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRG 337
Query: 343 WVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTE 379
+ P T ++ L + +A L+ ++ K E
Sbjct: 338 FSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIE 374
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 126/264 (47%), Gaps = 16/264 (6%)
Query: 119 VTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRI-----YLDFPKNYSIQPDVET 173
+T F +M+ E P+V LF LI + + + R+ LD K+ S+ D+
Sbjct: 188 LTLFQQMQ-ELGYEPTVH-----LFTTLI-RGFAKEGRVDSALSLLDEMKSSSLDADIVL 240
Query: 174 YNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMME 233
YN I SF + G + E++ N ++P+ VT+++ I + +E ++ + +E
Sbjct: 241 YNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLE 300
Query: 234 EKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNL 293
K P YN I+ + EA +LL+ + G P+ ++++ ++ G +
Sbjct: 301 -KNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKV 359
Query: 294 DEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDK-GWVPNFTTMKK 352
DEA KVF +MKK P Y L LC G ++AFE+ ++SM K G PN T+
Sbjct: 360 DEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFEL-RDSMQKAGLFPNVRTVNI 417
Query: 353 LVTGLVGVSKTDDAKELIKQVKEK 376
+V L K D+A + +++ K
Sbjct: 418 MVDRLCKSQKLDEACAMFEEMDYK 441
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 1/214 (0%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
K +P V TY +VI A+ Y + E + N V +S+ I+GF +
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
+E +L+ + +K G++P L T+N + +L K + +EA Q M PN V++
Sbjct: 674 DEAYLILEELMQK-GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGI 732
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
LI+G C ++A + +M+K+G KP + Y T+ L + G+ A + G
Sbjct: 733 LINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANG 792
Query: 343 WVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
VP+ ++ GL ++ DA L ++ + +
Sbjct: 793 GVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRR 826
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 127/264 (48%), Gaps = 8/264 (3%)
Query: 120 TAFTRMRDEFQ---ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSI-QPDVETYN 175
TAF +RD Q + P+V+++N ++ ++ E ++ + +Y + PD T+
Sbjct: 395 TAF-ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM--DYKVCTPDEITFC 451
Query: 176 TVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEK 235
++I + G Y + +M + R N++ +++ I+ F++ + E+ K+ K M +
Sbjct: 452 SLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ 511
Query: 236 YGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDE 295
SP L N + + K + +A+ + + + P+ S+S LIHG G +E
Sbjct: 512 -NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANE 570
Query: 296 AKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVT 355
++F MK++G ++ Y + C+ G A+++ +E KG+ P T ++
Sbjct: 571 TYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVID 630
Query: 356 GLVGVSKTDDAKELIKQVKEKFTE 379
GL + + D+A L ++ K K E
Sbjct: 631 GLAKIDRLDEAYMLFEEAKSKRIE 654
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 1/180 (0%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
K+ I+ +V Y+++I F + G Y IL E+ + + PN T+++ ++ ++
Sbjct: 649 KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEI 708
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
E + M+E +P TY + I LCK+++ ++A Q M G KP+ +S++
Sbjct: 709 NEALVCFQSMKE-LKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTT 767
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
+I G GN+ EA +F K G P+S CY + L G AF + +E+ +G
Sbjct: 768 MISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRG 827
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 109/243 (44%), Gaps = 2/243 (0%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
PSV + ++ + A +E + + + + +P Y T+I +F+ + + +
Sbjct: 131 PSVNTCIEMVLGCVKANKLREGYDV-VQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLT 189
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
+ +M P F+ I GF E + + +L M+ + + YNV I S
Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSS-SLDADIVLYNVCIDSF 248
Query: 253 CKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPES 312
K+ + A + + G KP+ V+++ +I C LDEA ++F ++K P +
Sbjct: 249 GKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCT 308
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQ 372
Y T+ G F+ A+ + + KG +P+ ++T L + K D+A ++ ++
Sbjct: 309 YAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEE 368
Query: 373 VKE 375
+K+
Sbjct: 369 MKK 371
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 110/242 (45%), Gaps = 7/242 (2%)
Query: 139 NALLFAALIAKDY-----KEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSI 193
N++++ +LI + ++ +IY D N + PD++ NT + ++G ++
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMI-NQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539
Query: 194 LSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLC 253
E+ P+A ++S I G E ++ M+E+ G YN+ I C
Sbjct: 540 FEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ-GCVLDTRAYNIVIDGFC 598
Query: 254 KLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESP 313
K + ++A LL+ M + G +P V++ +I G LDEA +F + K + +
Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658
Query: 314 CYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
Y +L + G + A+ I +E M KG PN T L+ LV + ++A + +
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718
Query: 374 KE 375
KE
Sbjct: 719 KE 720
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 96/222 (43%), Gaps = 5/222 (2%)
Query: 153 EVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNA 212
E ++ KN + P YNT+I + +G YS+L P+ + ++
Sbjct: 291 EAVEMFEHLEKNRRV-PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCI 349
Query: 213 IEGFYSEKKFEEVGKVLKMMEE-KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISG 271
+ +K +V + LK+ EE K +P LSTYN+ I LC+ + A L M
Sbjct: 350 LTCL---RKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKA 406
Query: 272 GRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESA 331
G PN + + ++ C LDEA +F +M + P+ + +L L + G + A
Sbjct: 407 GLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDA 466
Query: 332 FEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
+++ ++ +D N L+ + +D ++ K +
Sbjct: 467 YKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 89/240 (37%), Gaps = 36/240 (15%)
Query: 172 ETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKM 231
E+YN+++ A + ++ IL EM P+ T + G K E V++M
Sbjct: 99 ESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQM 158
Query: 232 MEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEG 291
M K+ PA S Y I + + + L Q M G +P F+ LI G+ EG
Sbjct: 159 MR-KFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEG 217
Query: 292 NLDEAK-----------------------------------KVFADMKKRGYKPESPCYF 316
+D A K F +++ G KP+ Y
Sbjct: 218 RVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYT 277
Query: 317 TLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
++ LC+ + A E+ + VP ++ G K D+A L+++ + K
Sbjct: 278 SMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK 337
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 176/459 (38%), Gaps = 104/459 (22%)
Query: 20 SSTPLTAKEKSRTA--LHLLKSETNPERILDIC------RAASLTPDFHLDRIA-LSVAI 70
S P+T + K + + +LK++ N +ILD C R ++P F DRI + + +
Sbjct: 23 SHLPITPRIKKLVSDTVSILKTQQNWSQILDDCFADEEVRFVDISP-FVFDRIQDVEIGV 81
Query: 71 -------SKLKD---GNHFSTIDQFLRDLPTSR---------PDLRNERF------LSQS 105
S+ KD N F+ FL+ L R +LRNE LS
Sbjct: 82 KLFDWLSSEKKDEFFSNGFAC-SSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHV 140
Query: 106 IVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIY------L 159
+ Y ++ L AV + + + + P V + N+LL + ++ + ++Y
Sbjct: 141 LHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRG 200
Query: 160 DFPKNYS----------------------------IQPDVETYNTVIKSFAESGSTSSVY 191
D NYS P++ YNT+I + + G + Y
Sbjct: 201 DSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAY 260
Query: 192 SILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEK---------------- 235
+ E+ P TF I GF E F ++L ++E+
Sbjct: 261 LVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAK 320
Query: 236 ----YGMSPA--------------LSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNW 277
Y + PA ++TYN+ I LCK + A L G PN
Sbjct: 321 YRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNN 380
Query: 278 VSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKE 337
+S++ LI YC D A K+ M +RG KP+ Y L H L G + A + +
Sbjct: 381 LSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVK 440
Query: 338 SMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+D+G P+ L++GL + AK L ++ ++
Sbjct: 441 LIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDR 479
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 1/198 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
+ PD YN ++ ++G + SEM ++ P+A ++ I+GF F+E
Sbjct: 445 GVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEA 504
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
KV + EK G+ + +N I C+ EA A + M P+ ++S +I
Sbjct: 505 RKVFSLSVEK-GVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIID 563
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
GY + ++ A K+F M+K KP Y +L + C GDF+ A E KE + VP
Sbjct: 564 GYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVP 623
Query: 346 NFTTMKKLVTGLVGVSKT 363
N T L+ L S T
Sbjct: 624 NVVTYTTLIRSLAKESST 641
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 7/220 (3%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
+PDV TYN +I + G L E + + PN ++++ I+ + K+++ K
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
+L M E+ G P + TY + I L +A + +I G P+ ++ L+ G
Sbjct: 402 LLLQMAER-GCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGL 460
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
C G AK +F++M R P++ Y TL GDF+ A ++ S++KG +
Sbjct: 461 CKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDV 520
Query: 348 TTMKKLVTGLVGVSKTDDAKELIKQVKE------KFTESS 381
++ G D+A + ++ E KFT S+
Sbjct: 521 VHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYST 560
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 104/227 (45%), Gaps = 4/227 (1%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
P V + N +L L + KEV+ +LD + P+ +Y +I+++ +S
Sbjct: 343 PDVATYN-ILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEE-VGKVLKMMEEKYGMSPALSTYNVRILS 251
+L +M +P+ VT+ I G ++ V +K+++ G+SP + YN+ +
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDR--GVSPDAAIYNMLMSG 459
Query: 252 LCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPE 311
LCK R AK L M+ P+ ++ LI G+ G+ DEA+KVF+ ++G K +
Sbjct: 460 LCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVD 519
Query: 312 SPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLV 358
+ + C G + A ++ VP+ T ++ G V
Sbjct: 520 VVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYV 566
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 113/276 (40%), Gaps = 38/276 (13%)
Query: 139 NALLFAALIAKDYK--EVSRIYLDFP--KNYSIQPDVETYNTVIKSFAESGSTSSVYSIL 194
N + + +I K ++ YL F K P +ET+ T+I F + G + +L
Sbjct: 239 NIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLL 298
Query: 195 SEMDRNSVRPNAVTFSNAIEGFYSE----KKFEEVGKVL----------------KMMEE 234
SE+ +R + +N I+ Y E +G ++ ++ +E
Sbjct: 299 SEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKE 358
Query: 235 --------------KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSF 280
K G+ P +Y I + CK K A LL M G KP+ V++
Sbjct: 359 GKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTY 418
Query: 281 SHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMD 340
LIHG G++D+A + + RG P++ Y L LC+ G F A + E +D
Sbjct: 419 GILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLD 478
Query: 341 KGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+ +P+ L+ G + D+A+++ EK
Sbjct: 479 RNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEK 514
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
PD TY+T+I + + ++ I M++N +PN VT+++ I GF + F+ +
Sbjct: 553 PDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEET 612
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSE-AKALLQGMISGGRKPNWVSFSHLIHGY 287
K M+ + + P + TY I SL K T E A + M++ PN V+F+ L+ G+
Sbjct: 613 FKEMQLR-DLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGF 671
Query: 288 CWE--------------GNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFE 333
+ G + F MK G+ + Y + LC G ++A
Sbjct: 672 VKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACM 731
Query: 334 ITKESMDKGWVPNFTTMKKLVTG--LVGVSK 362
+ + KG+ P+ + ++ G +VG SK
Sbjct: 732 FQDKMVKKGFSPDPVSFAAILHGFCVVGNSK 762
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 27/219 (12%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
Y + + + A+ F R ++ + P+V + +L+ D+K + + +
Sbjct: 565 YVKQQDMATAIKIF-RYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLR-DLV 622
Query: 169 PDVETYNTVIKSFAESGST--SSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVG 226
P+V TY T+I+S A+ ST +VY M N PN VTF+ ++GF + G
Sbjct: 623 PNVVTYTTLIRSLAKESSTLEKAVY-YWELMMTNKCVPNEVTFNCLLQGFVKKTS----G 677
Query: 227 KVL-----------KMMEEKY------GMSPALSTYNVRILSLCKLKRTSEAKALLQGMI 269
KVL + E + G S + YN ++ LC A M+
Sbjct: 678 KVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMV 737
Query: 270 SGGRKPNWVSFSHLIHGYCWEGNLDEAKKV-FADMKKRG 307
G P+ VSF+ ++HG+C GN + + + F ++ ++G
Sbjct: 738 KKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKG 776
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 131/315 (41%), Gaps = 41/315 (13%)
Query: 101 FLSQSIVLYGQARM--LPNAVTAFTRMRDE-FQITPSVKSLNALLFAALIAKDYKEVSRI 157
F S SI+L A+ + AF +M E F+ V N LL A ++ KE I
Sbjct: 139 FKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEARSI 198
Query: 158 YLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFY 217
+ ++ PDV+T N ++ F E+G ++ EM + +PN+VT+ I+GF
Sbjct: 199 FEKLHSRFN--PDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFC 256
Query: 218 SEKKFEEVGKVLKMMEE----------------------------------KYGMSPALS 243
++ F E ++ + M+ K G++P
Sbjct: 257 KKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCG 316
Query: 244 TYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW--EGNLDEAKKVFA 301
YN + SL K S A +++ M G +P+ V+F + G E + + +
Sbjct: 317 AYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQ 376
Query: 302 DMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVS 361
MK+R P++P L C G+ ++ K ++KG+ P+ ++ L T L
Sbjct: 377 KMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARR 436
Query: 362 KTDDAKELIKQVKEK 376
+ +DA E Q E+
Sbjct: 437 RANDAFECSWQTVER 451
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 126/265 (47%), Gaps = 7/265 (2%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
P+V LL+ A K+ R+ ++ + I PD Y ++ + G+
Sbjct: 104 PNVAHSTQLLYDLCKANRLKKAIRV-IELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQ 162
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
++ +M+ + N VT++ + G + + ++ + +K G++P TY+ + +
Sbjct: 163 LVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQK-GLAPNAFTYSFLLEAA 221
Query: 253 CKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPES 312
K + T EA LL +I G +PN VS++ L+ G+C EG D+A +F ++ +G+K
Sbjct: 222 YKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANV 281
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKG-WVPNFTTMKKLVTGLVGVSKTDDAKELIK 371
Y L LC G +E A + E MD G P+ T L+ L +T+ A +++K
Sbjct: 282 VSYNILLRCLCCDGRWEEANSLLAE-MDGGDRAPSVVTYNILINSLAFHGRTEQALQVLK 340
Query: 372 QV---KEKFTESSDKWDEIEAELIK 393
++ +F ++ ++ + A L K
Sbjct: 341 EMSKGNHQFRVTATSYNPVIARLCK 365
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 70/133 (52%)
Query: 174 YNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMME 233
Y +VI S G+T + + +L EM R P+A T+S I G E F +VL +ME
Sbjct: 426 YKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIME 485
Query: 234 EKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNL 293
E P + +N IL LCK++RT A + + M+ R PN +++ L+ G E L
Sbjct: 486 ESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDEL 545
Query: 294 DEAKKVFADMKKR 306
+ AK+V +++ R
Sbjct: 546 ELAKEVLDELRLR 558
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 112/258 (43%), Gaps = 5/258 (1%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPK-NYSIQPDVETYNTVIKSFAESGSTSSVY 191
PSV + N L+ + ++ ++ + K N+ + +YN VI + G V
Sbjct: 314 PSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVV 373
Query: 192 SILSEMDRNSVRPNAVTFSNAIEGFYSEK-KFEEVGKVLKMMEEKYGMSPALSTYNVRIL 250
L EM +PN T+ NAI K +E +++ + K Y I
Sbjct: 374 KCLDEMIYRRCKPNEGTY-NAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTH-DFYKSVIT 431
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKK-RGYK 309
SLC+ T A LL M G P+ ++S LI G C EG A +V + M++ K
Sbjct: 432 SLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCK 491
Query: 310 PESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKEL 369
P + + LC+ + A E+ + ++K +PN TT LV G+ + + AKE+
Sbjct: 492 PTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEV 551
Query: 370 IKQVKEKFTESSDKWDEI 387
+ +++ + + D I
Sbjct: 552 LDELRLRKVIGQNAVDRI 569
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 91/208 (43%), Gaps = 3/208 (1%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
+P++ +YN ++ F + G T ++ E+ + N V+++ + + ++EE
Sbjct: 243 EPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANS 302
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGR--KPNWVSFSHLIH 285
+L M+ +P++ TYN+ I SL RT +A +L+ M G + S++ +I
Sbjct: 303 LLAEMDGG-DRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIA 361
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
C EG +D K +M R KP Y + + AF I + +K
Sbjct: 362 RLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCC 421
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIKQV 373
K ++T L T A +L+ ++
Sbjct: 422 THDFYKSVITSLCRKGNTFAAFQLLYEM 449
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%)
Query: 237 GMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEA 296
G P ++ + LCK R +A +++ M+S G P+ ++++L++ C GN+ A
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 297 KKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTG 356
++ M+ GY + Y L LC G + + + M KG PN T L+
Sbjct: 161 MQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEA 220
Query: 357 LVGVSKTDDAKELIKQVKEKFTE 379
TD+A +L+ ++ K E
Sbjct: 221 AYKERGTDEAVKLLDEIIVKGGE 243
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 61/118 (51%)
Query: 259 SEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTL 318
S++ + L+ +++GG KPN + L++ C L +A +V M G P++ Y L
Sbjct: 88 SDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYL 147
Query: 319 AHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+ LC+ G+ A ++ ++ D G+ N T LV GL + + + + ++++ +K
Sbjct: 148 VNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQK 205
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 105/244 (43%), Gaps = 1/244 (0%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
P V NAL+ DYK + + + I P+V +Y+T+I SG +S
Sbjct: 244 PVVSVYNALINGLCKEHDYKGAFELMREMVEK-GISPNVISYSTLINVLCNSGQIELAFS 302
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
L++M + PN T S+ ++G + + + M +G+ P + YN +
Sbjct: 303 FLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGF 362
Query: 253 CKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPES 312
C +A ++ M G PN ++ LI+G+ G+LD A ++ M G P
Sbjct: 363 CSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNV 422
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQ 372
Y + LC F+ A + + + P+ T + GL + D A+++ +Q
Sbjct: 423 VVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 482
Query: 373 VKEK 376
++++
Sbjct: 483 MEQQ 486
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 6/215 (2%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
K + P V+ YN V+ + +Y + +M R+ PN T++ ++ K
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
+ K+L M K G P +Y I S+C++ E + L + +P ++
Sbjct: 198 DGAKKLLVEMSNK-GCCPDAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYNA 251
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
LI+G C E + A ++ +M ++G P Y TL + LC G E AF + + +G
Sbjct: 252 LINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG 311
Query: 343 WVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKF 377
PN T+ LV G T DA +L Q+ F
Sbjct: 312 CHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGF 346
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 161/418 (38%), Gaps = 70/418 (16%)
Query: 20 SSTPLTAKEKSRTALHLLKSETNPERILDICRAASLTPDFHLDRIALSVAISKLKDGNHF 79
+ +P A+ K + L+ E+ L ++ + + F + V I KL
Sbjct: 33 TESPNHAEIKELDVVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQV 92
Query: 80 STIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLN 139
++ L+ + + F+S I +Y Q + AV F R++ EF PSVK N
Sbjct: 93 DSVQYLLQQMKLQGFHCSEDLFIS-VISVYRQVGLAERAVEMFYRIK-EFGCDPSVKIYN 150
Query: 140 ALLFAALIAKDYKEVSRIYLDFPK----------------------------------NY 165
+L L + + +Y D + N
Sbjct: 151 HVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNK 210
Query: 166 SIQPDVETYNTVIKSFAESG-------------STSSVYS-----------------ILS 195
PD +Y TVI S E G SVY+ ++
Sbjct: 211 GCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMR 270
Query: 196 EMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKL 255
EM + PN +++S I + + E L M ++ G P + T + ++ C L
Sbjct: 271 EMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKR-GCHPNIYTLS-SLVKGCFL 328
Query: 256 KRTS-EAKALLQGMISG-GRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESP 313
+ T+ +A L MI G G +PN V+++ L+ G+C GN+ +A VF+ M++ G P
Sbjct: 329 RGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIR 388
Query: 314 CYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIK 371
Y +L + + G + A I + + G PN +V L SK +A+ LI+
Sbjct: 389 TYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIE 446
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/332 (20%), Positives = 129/332 (38%), Gaps = 43/332 (12%)
Query: 79 FSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSL 138
FS + Q L+ P++ L + L G +A+ + +M F + P+V +
Sbjct: 301 FSFLTQMLKR--GCHPNIYTLSSLVKGCFLRGTTF---DALDLWNQMIRGFGLQPNVVAY 355
Query: 139 NALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMD 198
N L+ + + ++ + P++ TY ++I FA+ GS I ++M
Sbjct: 356 NTLVQGFCSHGNIVKAVSVF-SHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKML 414
Query: 199 RNSVRPNAVTFSNAIEGFYSEKKFEEVG-------------------------------- 226
+ PN V ++N +E KF+E
Sbjct: 415 TSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLD 474
Query: 227 ---KVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHL 283
KV + ME+++ P + TYN + L K R EA L + + G + + +++ L
Sbjct: 475 WAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTL 534
Query: 284 IHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITK--ESMDK 341
+HG C G A ++ M G P+ + C+ G E A ++ +
Sbjct: 535 LHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRR 594
Query: 342 GWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
W P+ + ++ GL + +D L++++
Sbjct: 595 KWRPDVISYTNVIWGLCRSNCREDGVILLERM 626
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 109/225 (48%), Gaps = 4/225 (1%)
Query: 152 KEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSN 211
+E R++++ N ++ DV +Y+++I +++ GS + V + M + + P+ ++
Sbjct: 284 REAERVWMEMG-NVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNA 342
Query: 212 AIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISG 271
+ E ++K MEE+ G+ P + TYN I LCK ++T EAK + M+
Sbjct: 343 VVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEK 402
Query: 272 GRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESA 331
G P ++ H G +E ++ A M+K G +P Y L LC DF++
Sbjct: 403 GLFPTIRTY-HAFMRILRTG--EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNV 459
Query: 332 FEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+ E +K P+ ++ ++ GL K ++A K++K+K
Sbjct: 460 LLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDK 504
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 7/209 (3%)
Query: 103 SQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFP 162
S I Y + L + F RM+ E I P K NA++ A A E +
Sbjct: 306 SSMISCYSKGGSLNKVLKLFDRMKKEC-IEPDRKVYNAVVHALAKASFVSEARNLMKTME 364
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYS-EKK 221
+ I+P+V TYN++IK ++ T + EM + P T+ + + E+
Sbjct: 365 EEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEV 424
Query: 222 FEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFS 281
FE + K+ KM G P + TY + I LC+ + L M P+ S+
Sbjct: 425 FELLAKMRKM-----GCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYI 479
Query: 282 HLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
+IHG G ++EA + +MK +G +P
Sbjct: 480 VMIHGLFLNGKIEEAYGYYKEMKDKGMRP 508
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 6/207 (2%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
PD T ++ + E+G + +M +PN + F++ I+G K + +
Sbjct: 250 PDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLC---KKGSIKQA 306
Query: 229 LKMMEE--KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMI-SGGRKPNWVSFSHLIH 285
+M+EE + G P + T+ I LCK T +A L ++ S KPN +++ +I
Sbjct: 307 FEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIG 366
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
GYC E L+ A+ +F+ MK++G P Y TL + C+ G F A+E+ D+G++P
Sbjct: 367 GYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMP 426
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIKQ 372
N T + L S+ +A EL+ +
Sbjct: 427 NIYTYNAAIDSLCKKSRAPEAYELLNK 453
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 112/239 (46%), Gaps = 7/239 (2%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
Y + L A F+RM+++ + P+V + L+ A + + ++ +
Sbjct: 368 YCKEDKLNRAEMLFSRMKEQ-GLFPNVNTYTTLINGHCKAGSFGRAYEL-MNLMGDEGFM 425
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P++ TYN I S + Y +L++ + + VT++ I+ + K ++ +
Sbjct: 426 PNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQ---EQCKQNDINQA 482
Query: 229 LKMM--EEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHG 286
L K G + N+ I + C+ K+ E++ L Q ++S G P +++ +I
Sbjct: 483 LAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISC 542
Query: 287 YCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
YC EG++D A K F +MK+ G P+S Y +L LC+ + A ++ + +D+G P
Sbjct: 543 YCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 601
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 112/246 (45%), Gaps = 21/246 (8%)
Query: 137 SLNALLFA--ALIAKDYKEVSRIYL----DFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
S+ AL F A+ + ++ R+YL N ++Q E ++++F+E G +
Sbjct: 107 SMVALCFFYWAVGFEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEA 166
Query: 191 YSILSEMDRNSVRPNAVTFSNAIE-----GF--YSEKKFEEVGKVLKMMEEKYGMSPALS 243
++ +M + P+++T + +E G Y+E F+E+ G+ P S
Sbjct: 167 VGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEM--------SVRGVVPDSS 218
Query: 244 TYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADM 303
+Y + ++ + + EA L GMI G P+ + + ++ C G ++ A F M
Sbjct: 219 SYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKM 278
Query: 304 KKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKT 363
G+KP + +L LC+ G + AFE+ +E + GW PN T L+ GL T
Sbjct: 279 IDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWT 338
Query: 364 DDAKEL 369
+ A L
Sbjct: 339 EKAFRL 344
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 128/334 (38%), Gaps = 74/334 (22%)
Query: 114 MLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVET 173
++ A+ F +M D P++ + +L+ K+ + + +N +P+V T
Sbjct: 267 LVNRAIWYFRKMID-LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRN-GWKPNVYT 324
Query: 174 YNTVIKSFAESGSTSSVYSILSEMDR-NSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMM 232
+ +I + G T + + ++ R ++ +PN T+++ I G+ E K + M
Sbjct: 325 HTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRM 384
Query: 233 EEKYGMSPALS-----------------------------------TYNVRILSLCKLKR 257
+E+ G+ P ++ TYN I SLCK R
Sbjct: 385 KEQ-GLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSR 443
Query: 258 TSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYK-------- 309
EA LL S G + + V+++ LI C + ++++A F M K G++
Sbjct: 444 APEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNI 503
Query: 310 ---------------------------PESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
P Y ++ C+ GD + A + G
Sbjct: 504 LIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHG 563
Query: 343 WVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
VP+ T L++GL S D+A +L + + ++
Sbjct: 564 CVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDR 597
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 115/261 (44%), Gaps = 25/261 (9%)
Query: 135 VKSLNALLFAALIAKDYKEVS--RIYLDFPKNYSIQPDVETYNTVIKSFA-ESGSTSSV- 190
VKS+ +L+ + + +++ S R+ LDF N E TV+ S A ESGS ++
Sbjct: 56 VKSVCSLVCTSYLRQNHVVSSPHRVNLDFDANSLTH---EQAITVVASLASESGSMVALC 112
Query: 191 ---YSILSEMDRNSVRPNAVTFSNAIEGFYSEK----------KFEEVGKV-----LKMM 232
+++ E R+ +R VT + + +K F E+G++ + M
Sbjct: 113 FFYWAVGFEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMD 172
Query: 233 EEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGN 292
+ G++P+ T N + +L A+ + M G P+ S+ ++ G +G
Sbjct: 173 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 232
Query: 293 LDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKK 352
+ EA + M +RG+ P++ + LCE G A ++ +D G+ PN
Sbjct: 233 IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 292
Query: 353 LVTGLVGVSKTDDAKELIKQV 373
L+ GL A E+++++
Sbjct: 293 LIDGLCKKGSIKQAFEMLEEM 313
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 109/254 (42%), Gaps = 4/254 (1%)
Query: 122 FTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSF 181
+T M ++ ++P + + N L+ Y ++ Y+ + PD TY + I
Sbjct: 143 YTEMLEDL-VSPDIYTFNTLV-NGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGH 200
Query: 182 AESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPA 241
+ + + EM +N N V+++ I G + KK +E +L M++ P
Sbjct: 201 CRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDD-NCCPN 259
Query: 242 LSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFA 301
+ TY V I +LC + SEA L + M G KP+ ++ LI +C LDEA +
Sbjct: 260 VRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLE 319
Query: 302 DMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVS 361
M + G P Y L C+ + A + + +++ VP+ T L+ G
Sbjct: 320 HMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSG 378
Query: 362 KTDDAKELIKQVKE 375
D A L+ ++E
Sbjct: 379 NLDSAYRLLSLMEE 392
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 4/231 (1%)
Query: 128 EFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGST 187
++++TP K N LL + +E+ R+Y + ++ + PD+ T+NT++ + + G
Sbjct: 115 KYKLTP--KCYNNLLSSLARFGLVEEMKRLYTEMLEDL-VSPDIYTFNTLVNGYCKLGYV 171
Query: 188 SSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNV 247
++ + + P+ T+++ I G K+ + KV K M + G +Y
Sbjct: 172 VEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQN-GCHRNEVSYTQ 230
Query: 248 RILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRG 307
I L + K+ EA +LL M PN +++ LI C G EA +F M + G
Sbjct: 231 LIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESG 290
Query: 308 YKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLV 358
KP+ Y L C G + A + + ++ G +PN T L+ G
Sbjct: 291 IKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFC 341
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 3/174 (1%)
Query: 137 SLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSE 196
S L++ AK E + + K+ + P+V TY +I + SG S ++ +
Sbjct: 227 SYTQLIYGLFEAKKIDEALSLLVKM-KDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQ 285
Query: 197 MDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLK 256
M + ++P+ ++ I+ F S +E +L+ M E G+ P + TYN I CK K
Sbjct: 286 MSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLEN-GLMPNVITYNALIKGFCK-K 343
Query: 257 RTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
+A LL M+ P+ ++++ LI G C GNLD A ++ + M++ G P
Sbjct: 344 NVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVP 397
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 96/241 (39%), Gaps = 4/241 (1%)
Query: 135 VKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSIL 194
+KS N++ AL D+ R F Y + P + YN ++ S A G + +
Sbjct: 87 IKSCNSVR-DALFVVDFCRTMRKGDSFEIKYKLTP--KCYNNLLSSLARFGLVEEMKRLY 143
Query: 195 SEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCK 254
+EM + V P+ TF+ + G+ E + + + + G P TY I C+
Sbjct: 144 TEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQA-GCDPDYFTYTSFITGHCR 202
Query: 255 LKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPC 314
K A + + M G N VS++ LI+G +DEA + MK P
Sbjct: 203 RKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRT 262
Query: 315 YFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVK 374
Y L LC G A + K+ + G P+ L+ D+A L++ +
Sbjct: 263 YTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHML 322
Query: 375 E 375
E
Sbjct: 323 E 323
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 114/248 (45%), Gaps = 1/248 (0%)
Query: 129 FQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTS 188
F+++P V + + ++ A + + + + + ++ +V TYN++I +A G
Sbjct: 219 FEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVE 278
Query: 189 SVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVR 248
+ +L M V N VT+++ I+G+ + EE V ++++EK ++ Y V
Sbjct: 279 GMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQ-HMYGVL 337
Query: 249 ILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGY 308
+ C+ + +A + MI G + N + LI+GYC G L EA+++F+ M
Sbjct: 338 MDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSL 397
Query: 309 KPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKE 368
KP+ Y TL C G + A ++ + K VP T L+ G + D
Sbjct: 398 KPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLS 457
Query: 369 LIKQVKEK 376
L K + ++
Sbjct: 458 LWKMMLKR 465
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 116/268 (43%), Gaps = 3/268 (1%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
Y ++ L A F+RM D + + P + N L+ A E ++ D +
Sbjct: 376 YCKSGQLVEAEQIFSRMND-WSLKPDHHTYNTLVDGYCRAGYVDEALKL-CDQMCQKEVV 433
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P V TYN ++K ++ G+ V S+ M + V + ++ S +E + F E K+
Sbjct: 434 PTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKL 493
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
+ + + G+ T NV I LCK+++ +EAK +L + KP ++ L HGY
Sbjct: 494 WENVLAR-GLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYY 552
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
GNL EA V M+++G P Y TL + ++ E +G P
Sbjct: 553 KVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVA 612
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQVKEK 376
T L+TG + D A ++ EK
Sbjct: 613 TYGALITGWCNIGMIDKAYATCFEMIEK 640
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 146/368 (39%), Gaps = 46/368 (12%)
Query: 62 DRIALSVAISKLKDGNHFSTIDQFLRDLPTSR--PDLRNERFLSQSIVLYGQARMLPNAV 119
D I L+V IS L + + L ++ R P ++ + LS Y + L A
Sbjct: 505 DTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHG---YYKVGNLKEAF 561
Query: 120 TAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIK 179
M + I P+++ N L+ A + +V+ + ++ + + P V TY +I
Sbjct: 562 AVKEYMERK-GIFPTIEMYNTLISGAFKYRHLNKVADLVIEL-RARGLTPTVATYGALIT 619
Query: 180 SFAESGSTSSVYSILSEMDRNSVRPNA--------------------------VTFSNAI 213
+ G Y+ EM + N V F +
Sbjct: 620 GWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLL 679
Query: 214 EGFYSEKKFEEVGKVLKMMEEKYGMSPALST-----------YNVRILSLCKLKRTSEAK 262
G+ S K+F E + +K S ST YNV I LCK + +A+
Sbjct: 680 PGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDAR 739
Query: 263 ALLQGMISGGR-KPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHF 321
L ++S R P+ +++ LIHG G++++A + +M +G P Y L
Sbjct: 740 KLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKG 799
Query: 322 LCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK-FTES 380
LC+ G+ + A + + KG PN T L+ GLV +A L +++ EK
Sbjct: 800 LCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVRG 859
Query: 381 SDKWDEIE 388
SDK +++
Sbjct: 860 SDKQGDVD 867
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 127/339 (37%), Gaps = 32/339 (9%)
Query: 42 NPERILDICRAASLTPDFHLDRIALSVAISKLKDGNHFSTIDQFLRDLPTSRPDLRNERF 101
NPE L+I AS F D A + L ++ +L +L L + F
Sbjct: 83 NPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVA----LNHSGF 138
Query: 102 LSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRI---- 157
V++G+ R+ EF +P+V + I K Y E +
Sbjct: 139 -----VVWGE----------LVRVFKEFSFSPTVFDM--------ILKVYAEKGLVKNAL 175
Query: 158 -YLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGF 216
D NY P + + N+++ + G + +M V P+ T S + +
Sbjct: 176 HVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAY 235
Query: 217 YSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPN 276
++ K E G+ + TYN I + +L+ M G N
Sbjct: 236 CRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRN 295
Query: 277 WVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITK 336
V+++ LI GYC +G ++EA+ VF +K++ + Y L C G A +
Sbjct: 296 VVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHD 355
Query: 337 ESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
++ G N T L+ G + +A+++ ++ +
Sbjct: 356 NMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMND 394
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 123/281 (43%), Gaps = 10/281 (3%)
Query: 92 SRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDY 151
S P+L E +I Y +AR + A+ AF M+ P+V N ++ + + D
Sbjct: 152 SCPEL--EPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDM 209
Query: 152 KEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSN 211
+ R Y K + +PDV T+N +I + S + EM PN V+F+
Sbjct: 210 DKALRFYQRMGKERA-KPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNT 268
Query: 212 AIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISG 271
I GF S K EE K+ M E G + +T + + LC+ R +A L+ +++
Sbjct: 269 LIRGFLSSGKIEEGVKMAYEMIE-LGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNK 327
Query: 272 GRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYF---TLAHFLCEGGDF 328
P+ + L+ C E A ++ ++ K+G ++PC+ TL L + G
Sbjct: 328 RVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKG---QTPCFIACTTLVEGLRKSGRT 384
Query: 329 ESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKEL 369
E A ++ M+ G +P+ T L+ L + DA L
Sbjct: 385 EKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRL 425
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 1/206 (0%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
+P+V YNTV+ + +SG M + +P+ TF+ I G+ KF+
Sbjct: 190 KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALD 249
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
+ + M+EK G P + ++N I + E + MI G + + + L+ G
Sbjct: 250 LFREMKEK-GCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGL 308
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
C EG +D+A + D+ + P Y +L LC A E+ +E KG P F
Sbjct: 309 CREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCF 368
Query: 348 TTMKKLVTGLVGVSKTDDAKELIKQV 373
LV GL +T+ A ++++
Sbjct: 369 IACTTLVEGLRKSGRTEKASGFMEKM 394
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 110/279 (39%), Gaps = 36/279 (12%)
Query: 118 AVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTV 177
A+ + RM E + P V + N L+ + + ++ + K +P+V ++NT+
Sbjct: 212 ALRFYQRMGKE-RAKPDVCTFNILINGYCRSSKFDLALDLFREM-KEKGCEPNVVSFNTL 269
Query: 178 IKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVG----------- 226
I+ F SG + EM R + T ++G E + ++
Sbjct: 270 IRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRV 329
Query: 227 ---------------------KVLKMMEE--KYGMSPALSTYNVRILSLCKLKRTSEAKA 263
+ ++MMEE K G +P + L K RT +A
Sbjct: 330 LPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASG 389
Query: 264 LLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLC 323
++ M++ G P+ V+F+ L+ C + +A ++ +GY+P+ Y L
Sbjct: 390 FMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFT 449
Query: 324 EGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSK 362
+ G + + E +DK +P+ T +L+ GL K
Sbjct: 450 KEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGK 488
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 9/216 (4%)
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFS---------NAIEGFYSEK 220
D +++ + +S A + +Y +LS + N ++ FS +AI+ + +
Sbjct: 112 DHDSFLWMSRSLAATHRFDDLYRLLSFVAANPCPCSSGIFSCPELEPIFRSAIDAYCRAR 171
Query: 221 KFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSF 280
K + M+ P + YN + K +A Q M KP+ +F
Sbjct: 172 KMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTF 231
Query: 281 SHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMD 340
+ LI+GYC D A +F +MK++G +P + TL G E ++ E ++
Sbjct: 232 NILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIE 291
Query: 341 KGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
G + T + LV GL + DDA L+ + K
Sbjct: 292 LGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNK 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 81/174 (46%), Gaps = 1/174 (0%)
Query: 203 RPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAK 262
+PN ++ + G+ ++ + + M ++ P + T+N+ I C+ + A
Sbjct: 190 KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERA-KPDVCTFNILINGYCRSSKFDLAL 248
Query: 263 ALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFL 322
L + M G +PN VSF+ LI G+ G ++E K+ +M + G + L L
Sbjct: 249 DLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGL 308
Query: 323 CEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
C G + A + + ++K +P+ LV L G +K A E+++++ +K
Sbjct: 309 CREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKK 362
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 63/120 (52%), Gaps = 5/120 (4%)
Query: 265 LQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCE 324
++ +I G KPN ++ +++GY G++D+A + + M K KP+ + L + C
Sbjct: 183 MKRLIDG--KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCR 240
Query: 325 GGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE---KFTESS 381
F+ A ++ +E +KG PN + L+ G + K ++ ++ ++ E +F+E++
Sbjct: 241 SSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEAT 300
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 1/205 (0%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P++ TY T++ + + G V ++ ++ + V +SN I G++ +
Sbjct: 205 PNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQ 264
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
+ M EK GM+ + +Y++ I L K EA LL MI G +PN ++++ +I G C
Sbjct: 265 DREMVEK-GMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLC 323
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
G L+EA +F + G + + Y TL +C G+ AF + + +G P+
Sbjct: 324 KMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSIL 383
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQV 373
T ++ GL + +A E+ K V
Sbjct: 384 TYNTVINGLCMAGRVSEADEVSKGV 408
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 103/223 (46%), Gaps = 4/223 (1%)
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL 229
DV Y +I + G ++ S V N +T+++ I G + E ++
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 230 KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW 289
+E G+ P+ TY + I +LCK +A+ LL M+S G PN + ++ ++ GYC
Sbjct: 714 DSLE-NIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCK 772
Query: 290 EGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTT 349
G ++A +V + P++ ++ C+ GD E A + E DK +F
Sbjct: 773 LGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFG 832
Query: 350 MKKLVTGLVGVSKTDDAKELIKQVKEKFTESSDKW-DEIEAEL 391
L+ G + ++A+ L++++ +ES K + ++AEL
Sbjct: 833 FLFLIKGFCTKGRMEEARGLLREM--LVSESVVKLINRVDAEL 873
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 1/179 (0%)
Query: 161 FPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEK 220
F K+ + + TYN++I + G + ++ + P+ VT+ I+ E
Sbjct: 680 FAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEG 739
Query: 221 KFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSF 280
F + K+L M K G+ P + YN + CKL +T +A ++ + G P+ +
Sbjct: 740 LFLDAEKLLDSMVSK-GLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTV 798
Query: 281 SHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESM 339
S +I GYC +G+++EA VF + K + + + L C G E A + +E +
Sbjct: 799 SSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML 857
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 13/192 (6%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNS--VRPNAVTFSNAIEGFYSEKKFE 223
IQP + TYNTVI +G +SE D S V + +T+S ++ + + +
Sbjct: 377 GIQPSILTYNTVINGLCMAGR-------VSEADEVSKGVVGDVITYSTLLDSYIKVQNID 429
Query: 224 EVGKVLK-MMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
V ++ + +E K M + N+ + + + EA AL + M P+ +++
Sbjct: 430 AVLEIRRRFLEAKIPMDLVMC--NILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYAT 487
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
+I GYC G ++EA ++F +++K + CY + LC+ G ++A E+ E +KG
Sbjct: 488 MIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKG 546
Query: 343 WVPNFTTMKKLV 354
+ T + L+
Sbjct: 547 LYLDIHTSRTLL 558
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 111/266 (41%), Gaps = 55/266 (20%)
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEE----- 224
DV +Y+ +I ++ G+ +L +M + V PN +T++ I G K EE
Sbjct: 276 DVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLF 335
Query: 225 -----VG-------------------------KVLKMMEEKYGMSPALSTYNVRILSLCK 254
VG +L ME++ G+ P++ TYN I LC
Sbjct: 336 NRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQR-GIQPSILTYNTVINGLCM 394
Query: 255 LKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESP- 313
R SEA + +G++ + +++S L+ Y N+D ++ ++R + + P
Sbjct: 395 AGRVSEADEVSKGVVG-----DVITYSTLLDSYIKVQNIDAVLEI----RRRFLEAKIPM 445
Query: 314 ----CYFTLAHFLCEG--GDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAK 367
C L FL G G+ ++ + E MD P+ T ++ G + ++A
Sbjct: 446 DLVMCNILLKAFLLMGAYGEADALYRAMPE-MD--LTPDTATYATMIKGYCKTGQIEEAL 502
Query: 368 ELIKQVKEKFTESSDKWDEIEAELIK 393
E+ ++++ ++ ++ I L K
Sbjct: 503 EMFNELRKSSVSAAVCYNRIIDALCK 528
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 114/264 (43%), Gaps = 5/264 (1%)
Query: 117 NAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNT 176
N + F D QI + + + + +A L Y++ + SI P ++
Sbjct: 43 NCILQFYSQLDSKQININHRIYSIVSWAFLNLNRYEDAEKFINIHISKASIFPRTHMLDS 102
Query: 177 VIKSFAES-GSTSSVYSILSEMDRN-SVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE 234
+I F+ + S IL + RN P+++TF + I F + + + +VL+MM
Sbjct: 103 LIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTN 162
Query: 235 KYGMSPALSTYNVRILS-LCKLKRTSEAKALLQGMI-SGGRKPNWVSFSHLIHGYCWEGN 292
K P + ++S CK+ + A + + SG PN V+++ L+ C G
Sbjct: 163 KNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGK 222
Query: 293 LDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKK 352
+DE + + ++ G++ + Y H +GG A +E ++KG + +
Sbjct: 223 VDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSI 282
Query: 353 LVTGLVGVSKTDDAKELI-KQVKE 375
L+ GL ++A L+ K +KE
Sbjct: 283 LIDGLSKEGNVEEALGLLGKMIKE 306
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 114/273 (41%), Gaps = 37/273 (13%)
Query: 132 TPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVY 191
PSV+ N LL ++ K+ +++ + K +++P V TY T+I+ +
Sbjct: 247 VPSVRIFNILLNGWFRSRKLKQAEKLWEEM-KAMNVKPTVVTYGTLIEGYCRMRRVQIAM 305
Query: 192 SILSEMDRNSVRPNAVTFSNAIEG-----------------FYSE------------KKF 222
+L EM + N + F+ I+G F E K F
Sbjct: 306 EVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNF 365
Query: 223 EEVG------KVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPN 276
+ G K+LKMM + G+ P +TYN K +T E L +I G P+
Sbjct: 366 CKAGDLPGASKILKMMMTR-GVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPD 424
Query: 277 WVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITK 336
+++ ++ C +G L A +V +MK RG P+ L H LC E AFE
Sbjct: 425 RLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFD 484
Query: 337 ESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKEL 369
++ +G +P + T K + GL +D AK L
Sbjct: 485 NAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRL 517
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 117/305 (38%), Gaps = 51/305 (16%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNAL--LFAALIAKDYKEVSRIYLD-----F 161
Y +A M+ A+ AF R + S L L L AL + + + +YL+
Sbjct: 183 YARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTM 242
Query: 162 PKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKK 221
N+ P V +N ++ + S + EM +V+P VT+ IEG+ ++
Sbjct: 243 DSNWV--PSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRR 300
Query: 222 FE---EVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWV 278
+ EV + +KM E M +N I L + R SEA +++ P V
Sbjct: 301 VQIAMEVLEEMKMAE----MEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIV 356
Query: 279 SFSHLIHGYCWEGNLDEAKKVFADMKKR-------------------------------- 306
+++ L+ +C G+L A K+ M R
Sbjct: 357 TYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKL 416
Query: 307 ---GYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKT 363
G+ P+ Y + LCE G A ++ KE ++G P+ T L+ L +
Sbjct: 417 IEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEML 476
Query: 364 DDAKE 368
++A E
Sbjct: 477 EEAFE 481
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 131/288 (45%), Gaps = 7/288 (2%)
Query: 36 LLKSETNPERILDICRAASLTPDFHLDRIALSVAISKLKDGNHFSTIDQFLRDLPTSRPD 95
L+ S+++P +I AS P+F R + + I KL G +F+ ID L +S
Sbjct: 57 LIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYP 116
Query: 96 LRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVS 155
L E F + I +Y +A++ ++ F +M EF TP K LN +L + + Y + +
Sbjct: 117 LTGEIF-TYLIKVYAEAKLPEKVLSTFYKML-EFNFTPQPKHLNRILDVLVSHRGYLQKA 174
Query: 156 RIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEG 215
+ + + P+ +YN ++++F + S Y + +M V P+ ++ I+G
Sbjct: 175 FELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQG 234
Query: 216 FYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKP 275
F + + ++L M K G P + I LC E K L+ MIS G P
Sbjct: 235 FCRKGQVNGAMELLDDMLNK-GFVPDRTL----IGGLCDQGMFDEGKKYLEEMISKGFSP 289
Query: 276 NWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLC 323
++ + L+ G+C G ++EA V + K G S + + +C
Sbjct: 290 HFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 337
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 100/217 (46%), Gaps = 5/217 (2%)
Query: 172 ETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKM 231
E + +IK +AE+ V S +M + P + ++ S + + + L
Sbjct: 120 EIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFK 179
Query: 232 MEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEG 291
+G+ P +YN+ + + C S A L M+ P+ S+ LI G+C +G
Sbjct: 180 SSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKG 239
Query: 292 NLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMK 351
++ A ++ DM +G+ P+ TL LC+ G F+ + +E + KG+ P+F+
Sbjct: 240 QVNGAMELLDDMLNKGFVPDR----TLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSN 295
Query: 352 KLVTGLVGVSKTDDAKELIKQV-KEKFTESSDKWDEI 387
LV G K ++A ++++ V K T SD W+ +
Sbjct: 296 CLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMV 332
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 66/124 (53%)
Query: 235 KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLD 294
++ + P TYN I CK R +AK +L M S G P+ V+FS LI+GYC +D
Sbjct: 3 RWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVD 62
Query: 295 EAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
++F +M +RG + Y TL H C+ GD ++A ++ E + G P++ T ++
Sbjct: 63 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 122
Query: 355 TGLV 358
GL
Sbjct: 123 AGLC 126
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 1/141 (0%)
Query: 197 MDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLK 256
M R S+ P +T+++ I+GF + + ++ ++L M K G SP + T++ I CK K
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASK-GCSPDVVTFSTLINGYCKAK 59
Query: 257 RTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYF 316
R + M G N V+++ LIHG+C G+LD A+ + +M G P+ +
Sbjct: 60 RVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFH 119
Query: 317 TLAHFLCEGGDFESAFEITKE 337
+ LC + AF I ++
Sbjct: 120 CMLAGLCSKKELRKAFAILED 140
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 1/141 (0%)
Query: 165 YSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEE 224
+SI P TYN++I F + +L M P+ VTFS I G+ K+ +
Sbjct: 4 WSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDN 63
Query: 225 VGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLI 284
++ M + G+ TY I C++ A+ LL MIS G P++++F ++
Sbjct: 64 GMEIFCEMHRR-GIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 122
Query: 285 HGYCWEGNLDEAKKVFADMKK 305
G C + L +A + D++K
Sbjct: 123 AGLCSKKELRKAFAILEDLQK 143
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 130/281 (46%), Gaps = 13/281 (4%)
Query: 58 DFHLDRIALSVAISKLKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPN 117
D H+ I + +SKL NH I L D+P + F+ I YG+A ++
Sbjct: 151 DTHMKMIKMLGEVSKL---NHARCI---LLDMPEKGVPWDEDMFVVL-IESYGKAGIVQE 203
Query: 118 AVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTV 177
+V F +M+D + ++KS N+L F ++ + +++ Y + + ++P TYN +
Sbjct: 204 SVKIFQKMKD-LGVERTIKSYNSL-FKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLM 261
Query: 178 IKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV-LKMMEEKY 236
+ F S + +M + P+ TF+ I GF KK +E K+ ++M K
Sbjct: 262 LWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKI 321
Query: 237 GMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEA 296
G P++ +Y I + R + + + M S G +PN ++S L+ G C G + EA
Sbjct: 322 G--PSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEA 379
Query: 297 KKVFADMKKRGYKP-ESPCYFTLAHFLCEGGDFESAFEITK 336
K + +M + P ++ + L + GD +A E+ K
Sbjct: 380 KNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLK 420
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 96/227 (42%), Gaps = 4/227 (1%)
Query: 157 IYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGF 216
I LD P+ + D + + +I+S+ ++G I +M V ++++ +
Sbjct: 172 ILLDMPEK-GVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVI 230
Query: 217 YSEKKFEEVGKVL-KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKP 275
++ + KM+ E G+ P TYN+ + R A + M + G P
Sbjct: 231 LRRGRYMMAKRYFNKMVSE--GVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISP 288
Query: 276 NWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEIT 335
+ +F+ +I+G+C +DEA+K+F +MK P Y T+ + I
Sbjct: 289 DDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIF 348
Query: 336 KESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTESSD 382
+E G PN TT L+ GL K +AK ++K + K D
Sbjct: 349 EEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKD 395
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 102/250 (40%), Gaps = 12/250 (4%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
I+P + N ++ K E +++++ N I P V +Y T+IK +
Sbjct: 286 ISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGN-KIGPSVVSYTTMIKGYLAVDRVDDG 344
Query: 191 YSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRIL 250
I EM + + PNA T+S + G K E +LK M K+ ++P ++ +++L
Sbjct: 345 LRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKH-IAPKDNSIFLKLL 403
Query: 251 -SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKR--- 306
S K + A +L+ M + + LI C + A K+ + ++
Sbjct: 404 VSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEII 463
Query: 307 -----GYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVS 361
+ E Y + +LC G A + ++ M +G V + + L+ G
Sbjct: 464 LRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRG-VQDQDALNNLIRGHAKEG 522
Query: 362 KTDDAKELIK 371
D + E++K
Sbjct: 523 NPDSSYEILK 532
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 117/283 (41%), Gaps = 19/283 (6%)
Query: 117 NAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNT 176
+ + F MR I P+ + + LL A E I + + D +
Sbjct: 343 DGLRIFEEMRSS-GIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLK 401
Query: 177 VIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEK- 235
++ S +++G ++ +L M +V A + IE + K+L + EK
Sbjct: 402 LLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKE 461
Query: 236 --------YGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
M P S YN I LC +T++A+ L + ++ G + + + ++LI G+
Sbjct: 462 IILRHQDTLEMEP--SAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGH 518
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCY-FTLAHFLCEG--GDFESAFEITKESMDKGWV 344
EGN D + ++ M +RG ES Y + ++ +G GD ++A + E G V
Sbjct: 519 AKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVED---GHV 575
Query: 345 PNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTESSDKWDEI 387
P+ + + ++ L + A ++ + +K D D I
Sbjct: 576 PDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLI 618
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSE---MDRNSV----------RPNAVTF 209
++ I + T N +I + S+ Y + E +D SV +PNA TF
Sbjct: 189 RSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTF 248
Query: 210 SNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMI 269
++ + FY E + E V ++ + MEE+ G SP + +YNV + + C SEA+ + + M
Sbjct: 249 NSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMK 308
Query: 270 SGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFE 329
G + V+++ +I G C + +AK++F DM +G + Y L + C+ GD +
Sbjct: 309 VRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVD 368
Query: 330 SAFEITKESMDKGWVPNFTTMKKLVTGLV 358
S + +E KG+ + T++ LV GL
Sbjct: 369 SGLVVYREMKRKGFEADGLTIEALVEGLC 397
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 111/259 (42%), Gaps = 45/259 (17%)
Query: 167 IQPDVETYNTVIKSFAESGSTSSVYSILSEMDRN-SVRPNAVTFSNAIEGFYSEKKFEEV 225
I+P+ T+N+++ SF G T V I EM+ PN +++ +E + + E
Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEA 300
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
KV + M+ + G+ + YN I LC +AK L + M G + +++ HL++
Sbjct: 301 EKVWEEMKVR-GVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVN 359
Query: 286 GYCWEGNLDEAKKVFADMKKRGYK------------------------------------ 309
GYC G++D V+ +MK++G++
Sbjct: 360 GYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREA 419
Query: 310 ---PESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVT--GLVGVSKTD 364
P CY L LCE G + A I E + KG+ P+ T + + G+VG +T
Sbjct: 420 MFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEETS 479
Query: 365 D--AKELIKQVKEKFTESS 381
A E+ + +K + E S
Sbjct: 480 ALLAIEMAESLKLRAEEES 498
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 93/201 (46%), Gaps = 3/201 (1%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
I P++ TYNT++K F +G + EM + + VT++ + GF + +
Sbjct: 225 GINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRA 284
Query: 226 GKVL-KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLI 284
V +M+ E G+ P+++TYN I LCK A + + M+ G +PN +++ LI
Sbjct: 285 RNVFDEMIRE--GVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLI 342
Query: 285 HGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWV 344
G G +++ M+ G +P Y + + E + E A + ++ +
Sbjct: 343 RGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCL 402
Query: 345 PNFTTMKKLVTGLVGVSKTDD 365
PN T L++G+ +++D
Sbjct: 403 PNLDTYNILISGMFVRKRSED 423
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 133/281 (47%), Gaps = 16/281 (5%)
Query: 105 SIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSR------IY 158
+I + + + P + RMR +I PS K+ A++A+ Y + ++
Sbjct: 97 AIDIAARLHLHPTVWSLIHRMRS-LRIGPSPKTF------AIVAERYASAGKPDKAVKLF 149
Query: 159 LDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYS 218
L+ ++ Q D+ ++NT++ +S Y + + R + VT++ + G+
Sbjct: 150 LNMHEHGCFQ-DLASFNTILDVLCKSKRVEKAYELFRAL-RGRFSVDTVTYNVILNGWCL 207
Query: 219 EKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWV 278
K+ + +VLK M E+ G++P L+TYN + + + A M + + V
Sbjct: 208 IKRTPKALEVLKEMVER-GINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVV 266
Query: 279 SFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKES 338
+++ ++HG+ G + A+ VF +M + G P Y + LC+ + E+A + +E
Sbjct: 267 TYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEM 326
Query: 339 MDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTE 379
+ +G+ PN TT L+ GL + +EL+++++ + E
Sbjct: 327 VRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCE 367
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 111/267 (41%), Gaps = 8/267 (2%)
Query: 109 YGQARMLPNAVTAFTRMRDE--FQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYS 166
Y A AV F M + FQ + S N +L +K ++ ++ +S
Sbjct: 136 YASAGKPDKAVKLFLNMHEHGCFQ---DLASFNTILDVLCKSKRVEKAYELFRALRGRFS 192
Query: 167 IQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVG 226
+ D TYN ++ + T +L EM + PN T++ ++GF+ +
Sbjct: 193 V--DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAW 250
Query: 227 KVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHG 286
+ M+++ + TY + A+ + MI G P+ +++ +I
Sbjct: 251 EFFLEMKKR-DCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQV 309
Query: 287 YCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPN 346
C + N++ A +F +M +RGY+P Y L L G+F E+ + ++G PN
Sbjct: 310 LCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPN 369
Query: 347 FTTMKKLVTGLVGVSKTDDAKELIKQV 373
F T ++ S+ + A L +++
Sbjct: 370 FQTYNMMIRYYSECSEVEKALGLFEKM 396
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 98/199 (49%), Gaps = 1/199 (0%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
+P+V TY +I G + +M ++ + P+ +T++ I G+ + + +
Sbjct: 333 KPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFE 392
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
+L +ME++ P + T+N + LC++ + +A LL+ M+ G P+ VS++ LI G
Sbjct: 393 LLTVMEKR-ACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGL 451
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
C EG+++ A K+ + M +P+ + + + C+ G + A + KG +
Sbjct: 452 CREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDE 511
Query: 348 TTMKKLVTGLVGVSKTDDA 366
T L+ G+ V KT DA
Sbjct: 512 VTGTTLIDGVCKVGKTRDA 530
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 122/287 (42%), Gaps = 39/287 (13%)
Query: 133 PSVKSLNALLFAAL-IAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVY 191
P+V++ N L+ + K YK V L + + PD+ +YN +I G ++ Y
Sbjct: 404 PNVRTFNELMEGLCRVGKPYKAVH--LLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAY 461
Query: 192 SILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILS 251
+LS M+ + P+ +TF+ I F + K + L +M K G+S T I
Sbjct: 462 KLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRK-GISLDEVTGTTLIDG 520
Query: 252 LCKLKRTSEAKALLQ------------------GMISGGRK-----------------PN 276
+CK+ +T +A +L+ M+S G K P+
Sbjct: 521 VCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPS 580
Query: 277 WVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITK 336
V+++ L+ G G++ + ++ MK G P Y + + LC+ G E A ++
Sbjct: 581 VVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLS 640
Query: 337 ESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTESSDK 383
D G PN T +V G V K D A E ++ + E+ E +D+
Sbjct: 641 AMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDR 687
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 97/230 (42%), Gaps = 2/230 (0%)
Query: 145 ALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRN-SVR 203
AL Y E + +++ D +++ F + + M + +
Sbjct: 204 ALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCA 263
Query: 204 PNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKA 263
PN+V++S I G + EE + M EK G P+ TY V I +LC +A
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEK-GCQPSTRTYTVLIKALCDRGLIDKAFN 322
Query: 264 LLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLC 323
L MI G KPN +++ LI G C +G ++EA V M K P Y L + C
Sbjct: 323 LFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYC 382
Query: 324 EGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
+ G AFE+ + PN T +L+ GL V K A L+K++
Sbjct: 383 KDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRM 432
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 101/231 (43%), Gaps = 1/231 (0%)
Query: 140 ALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDR 199
+LL + ++ +++ K + P+ +Y+ +I E G + + +M
Sbjct: 235 SLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGE 294
Query: 200 NSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTS 259
+P+ T++ I+ ++ + M + G P + TY V I LC+ +
Sbjct: 295 KGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPR-GCKPNVHTYTVLIDGLCRDGKIE 353
Query: 260 EAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLA 319
EA + + M+ P+ ++++ LI+GYC +G + A ++ M+KR KP + L
Sbjct: 354 EANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELM 413
Query: 320 HFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELI 370
LC G A + K +D G P+ + L+ GL + A +L+
Sbjct: 414 EGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLL 464
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 94/203 (46%)
Query: 174 YNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMME 233
Y T++ + ++G T + +S++ + ++ ++ + GF + KV +M
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257
Query: 234 EKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNL 293
++ +P +Y++ I LC++ R EA L M G +P+ +++ LI C G +
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317
Query: 294 DEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKL 353
D+A +F +M RG KP Y L LC G E A + ++ + P+ T L
Sbjct: 318 DKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNAL 377
Query: 354 VTGLVGVSKTDDAKELIKQVKEK 376
+ G + A EL+ ++++
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKR 400
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 121/311 (38%), Gaps = 39/311 (12%)
Query: 92 SRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDY 151
+P++R L + + G+ AV RM D ++P + S N L+ L + +
Sbjct: 402 CKPNVRTFNELMEGLCRVGKPY---KAVHLLKRMLDN-GLSPDIVSYNVLI-DGLCREGH 456
Query: 152 KEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSN 211
+ L + I+PD T+ +I +F + G + L M R + + VT +
Sbjct: 457 MNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTT 516
Query: 212 AIEGFYSEKK--------------------------FEEVGKVLKMMEE--------KYG 237
I+G K + + K K+ EE K G
Sbjct: 517 LIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLG 576
Query: 238 MSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAK 297
+ P++ TY + L + + + +L+ M G PN ++ +I+G C G ++EA+
Sbjct: 577 LVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAE 636
Query: 298 KVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGL 357
K+ + M+ G P Y + G + A E + +++G+ N L+ G
Sbjct: 637 KLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGF 696
Query: 358 VGVSKTDDAKE 368
V K D E
Sbjct: 697 VLSQKGIDNSE 707
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 98/223 (43%), Gaps = 19/223 (8%)
Query: 172 ETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKM 231
+ N ++ ++ ++L ++++ + P+ VT++ ++G ++L++
Sbjct: 547 HSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILEL 606
Query: 232 MEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEG 291
M+ G P + Y + I LC+ R EA+ LL M G PN V+++ ++ GY G
Sbjct: 607 MKLS-GCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG 665
Query: 292 NLDEAKKVFADMKKRGYKPESPCY------FTLAHFLCEGGDFESAFEITKESMDKGWVP 345
LD A + M +RGY+ Y F L+ + + + +I D +
Sbjct: 666 KLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECIN 725
Query: 346 NFTTMKK------------LVTGLVGVSKTDDAKELIKQVKEK 376
++ + LVT L +TD++ +L++ V E+
Sbjct: 726 ELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLER 768
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 1/210 (0%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
PD TY TV+ +F +G +L+EM R V N +T++ ++G+ + + +
Sbjct: 449 HPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAED 508
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
+L+ M E G+ P + +YN+ I + ++ A A M + G P +S++ L+ +
Sbjct: 509 LLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAF 568
Query: 288 CWEGNLDEAKKVFADMKKRG-YKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPN 346
G A +VF +M K + + L C G E A + + G+ PN
Sbjct: 569 AMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPN 628
Query: 347 FTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
T L G+ K DA L K++KE+
Sbjct: 629 VATYGSLANGVSQARKPGDALLLWKEIKER 658
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 83/210 (39%), Gaps = 19/210 (9%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
++ I+PDV +YN +I ++ + +EM + P ++++ ++ F +
Sbjct: 515 EDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQP 574
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
+ +V M + L +N+ + C+L +A+ ++ M G PN ++
Sbjct: 575 KLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGS 634
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRG-------------------YKPESPCYFTLAHFLC 323
L +G +A ++ ++K+R KP+ TLA
Sbjct: 635 LANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICV 694
Query: 324 EGGDFESAFEITKESMDKGWVPNFTTMKKL 353
F+ A EI + G PN T KK+
Sbjct: 695 RAAFFKKALEIIACMEENGIPPNKTKYKKI 724
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 121/285 (42%), Gaps = 38/285 (13%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
Y +A + A AF RM EF I P V L+ LL + L K + ++ + K + I
Sbjct: 148 YSRANLPSEACRAFNRMV-EFGIKPCVDDLDQLLHS-LCDKKHVNHAQEFFGKAKGFGIV 205
Query: 169 PDVETYNTVIKSFA-----------------------------------ESGSTSSVYSI 193
P +TY+ +++ +A +SG Y +
Sbjct: 206 PSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKM 265
Query: 194 LSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLC 253
EM ++P+A +F+ I + KVL M+ +Y + P + T+N I +LC
Sbjct: 266 FQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMK-RYDLVPNVYTFNHIIKTLC 324
Query: 254 KLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESP 313
K ++ +A LL MI G P+ +++ ++ +C ++ A K+ + M + P+
Sbjct: 325 KNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRH 384
Query: 314 CYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLV 358
Y + L G F+ A EI + ++ + P T ++ GLV
Sbjct: 385 TYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLV 429
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 1/149 (0%)
Query: 236 YGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDE 295
+G+ P+ TY++ + +++ S A+ + M+ + ++++ L+ C G++D
Sbjct: 202 FGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDG 261
Query: 296 AKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVT 355
K+F +M G KP++ + H C+ GD SA+++ VPN T ++
Sbjct: 262 GYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIK 321
Query: 356 GLVGVSKTDDAKELIKQVKEKFTESSDKW 384
L K DDA L+ ++ +K + D W
Sbjct: 322 TLCKNEKVDDAYLLLDEMIQK-GANPDTW 349
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 102/244 (41%), Gaps = 36/244 (14%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
++ D YN +I+ SG+ + Y + +M + V P+ T++ I E KF+E
Sbjct: 295 NVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEA 354
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLC-------------------------------- 253
+ M+ G++P +Y V I LC
Sbjct: 355 CDLHGTMQNG-GVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVID 413
Query: 254 ---KLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
+ TS A ++L M+S G KPN + + LIHGY G L +A V +M+ P
Sbjct: 414 GYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHP 473
Query: 311 ESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELI 370
++ Y L C G AF++ E + +G P+ T +LV GL + A+ L+
Sbjct: 474 DTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLL 533
Query: 371 KQVK 374
+++
Sbjct: 534 SRIQ 537
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P+V +N VI + G TSS S+L+ M V+PN T + I G+ + + V
Sbjct: 403 PEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWV 462
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
M + P +TYN+ + + C L A L M+ G +P+ ++++ L+ G C
Sbjct: 463 KNEMRST-KIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLC 521
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLA 319
W+G L +A+ + + ++ G + + LA
Sbjct: 522 WKGRLKKAESLLSRIQATGITIDHVPFLILA 552
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 79/203 (38%), Gaps = 38/203 (18%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFS--------NAIEGFYSEK 220
P+ +YNT+IK + + + M++ +RPN VT + + G ++K
Sbjct: 189 PNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKK 248
Query: 221 KFEEV-------------------------GKVLKMMEEKYGMS----PALST-YNVRIL 250
EE+ G V++ +E MS PA S YNV I
Sbjct: 249 LLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIR 308
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
LC A + M+ G P+ +++ LI C EG DEA + M+ G P
Sbjct: 309 GLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAP 368
Query: 311 ESPCYFTLAHFLCEGGDFESAFE 333
+ Y + LC GD A E
Sbjct: 369 DQISYKVIIQGLCIHGDVNRANE 391
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/246 (19%), Positives = 97/246 (39%), Gaps = 40/246 (16%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
K++ + ++++++ G + + +M + V P +T ++ + G
Sbjct: 113 KSFDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYI 172
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
E+ +++ M E G SP +YN I LC + +A L M G +PN V+ +
Sbjct: 173 EKADGLVREMRE-MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNI 231
Query: 283 LIHGYCWE---------------------------------------GNLDEAKKVFADM 303
++H C + GN+ +A +V+ +M
Sbjct: 232 IVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEM 291
Query: 304 KKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKT 363
++ +S Y + LC G+ +A+ + + +G P+ T L++ L K
Sbjct: 292 SQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKF 351
Query: 364 DDAKEL 369
D+A +L
Sbjct: 352 DEACDL 357
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 116/247 (46%), Gaps = 15/247 (6%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
Y ++ + A+ F ++ E ITPSV + N+L++ ++ E +I LD K Y +
Sbjct: 478 YAKSGCIEEALELF-KVVIETGITPSVATFNSLIYGYCKTQNIAEARKI-LDVIKLYGLA 535
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGF------------ 216
P V +Y T++ ++A G+T S+ + EM + P VT+S +G
Sbjct: 536 PSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHV 595
Query: 217 YSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPN 276
E+ FE+ + L+ ME + G+ P TYN I LC++K S A L+ M S +
Sbjct: 596 LRERIFEKCKQGLRDMESE-GIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDAS 654
Query: 277 WVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITK 336
+++ LI C G + +A ++++ Y TL C GD E A ++
Sbjct: 655 SATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFH 714
Query: 337 ESMDKGW 343
+ + +G+
Sbjct: 715 QLLHRGF 721
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 8/211 (3%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
K+ ++ ++YN+V+ F E+ VY + + N T+S ++G ++K
Sbjct: 151 KDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKD-------KNEHTYSTVVDGLCRQQKL 203
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
E+ L+ E K + P++ ++N + CKL AK+ ++ G P+ S +
Sbjct: 204 EDAVLFLRTSEWK-DIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNI 262
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
LI+G C G++ EA ++ +DM K G +P+S Y LA G A+E+ ++ +DKG
Sbjct: 263 LINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKG 322
Query: 343 WVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
P+ T L+ G + D L+K +
Sbjct: 323 LSPDVITYTILLCGQCQLGNIDMGLVLLKDM 353
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 130/315 (41%), Gaps = 39/315 (12%)
Query: 97 RNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSR 156
+NE S + + + L +AV F R + I PSV S N+++ + + ++++
Sbjct: 185 KNEHTYSTVVDGLCRQQKLEDAVL-FLRTSEWKDIGPSVVSFNSIM-SGYCKLGFVDMAK 242
Query: 157 IYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGF 216
+ + P V ++N +I GS + + S+M+++ V P++VT++ +GF
Sbjct: 243 SFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGF 302
Query: 217 YSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILS------------------------- 251
+ +V++ M +K G+SP + TY + +
Sbjct: 303 HLLGMISGAWEVIRDMLDK-GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN 361
Query: 252 -----------LCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVF 300
LCK R EA +L M + G P+ V++S +IHG C G D A ++
Sbjct: 362 SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLY 421
Query: 301 ADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGV 360
+M + P S + L LC+ G A + + G + ++ G
Sbjct: 422 DEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKS 481
Query: 361 SKTDDAKELIKQVKE 375
++A EL K V E
Sbjct: 482 GCIEEALELFKVVIE 496
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 126/270 (46%), Gaps = 11/270 (4%)
Query: 106 IVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNY 165
+ L + RM+ +++ +M+D+ + S +S N++L+ ++E +++ D K
Sbjct: 131 LFLSSRLRMVDDSLYILKKMKDQ-NLNVSTQSYNSVLY------HFRETDKMW-DVYKEI 182
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
+ + TY+TV+ L + + P+ V+F++ + G Y + F ++
Sbjct: 183 KDKNE-HTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSG-YCKLGFVDM 240
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
K K G+ P++ ++N+ I LC + +EA L M G +P+ V+++ L
Sbjct: 241 AKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAK 300
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
G+ G + A +V DM +G P+ Y L C+ G+ + + K+ + +G+
Sbjct: 301 GFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFEL 360
Query: 346 N-FTTMKKLVTGLVGVSKTDDAKELIKQVK 374
N +++GL + D+A L Q+K
Sbjct: 361 NSIIPCSVMLSGLCKTGRIDEALSLFNQMK 390
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 128/294 (43%), Gaps = 23/294 (7%)
Query: 55 LTPDFHLDRIA-LSVAISKL-KDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQA 112
L+ F L+ I SV +S L K G ID+ L + D + ++ SIV++G
Sbjct: 354 LSRGFELNSIIPCSVMLSGLCKTGR----IDEALSLFNQMKADGLSPDLVAYSIVIHGLC 409
Query: 113 RM--LPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPD 170
++ A+ + M D+ +I P+ ++ ALL L K +R LD + D
Sbjct: 410 KLGKFDMALWLYDEMCDK-RILPNSRTHGALLLG-LCQKGMLLEARSLLDSLISSGETLD 467
Query: 171 VETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLK 230
+ YN VI +A+SG + + + P+ TF++ I G+ + E K+L
Sbjct: 468 IVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD 527
Query: 231 MMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC-- 288
+++ YG++P++ +Y + + T L + M + G P V++S + G C
Sbjct: 528 VIK-LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRG 586
Query: 289 W----------EGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAF 332
W E ++ K+ DM+ G P+ Y T+ +LC AF
Sbjct: 587 WKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAF 640
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 106/280 (37%), Gaps = 38/280 (13%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
+ PSV S N L+ + E + D K + ++PD TYN + K F G S
Sbjct: 253 LVPSVYSHNILINGLCLVGSIAEALELASDMNK-HGVEPDSVTYNILAKGFHLLGMISGA 311
Query: 191 YSILSEMDRNSVRPNAVTF------------------------------------SNAIE 214
+ ++ +M + P+ +T+ S +
Sbjct: 312 WEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLS 371
Query: 215 GFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRK 274
G + +E + M+ G+SP L Y++ I LCKL + A L M
Sbjct: 372 GLCKTGRIDEALSLFNQMKAD-GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRIL 430
Query: 275 PNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEI 334
PN + L+ G C +G L EA+ + + G + Y + + G E A E+
Sbjct: 431 PNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALEL 490
Query: 335 TKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVK 374
K ++ G P+ T L+ G +A++++ +K
Sbjct: 491 FKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 115/276 (41%), Gaps = 10/276 (3%)
Query: 102 LSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRI---- 157
++ +I+L GQ + L N ++D + LN+++ +++ + RI
Sbjct: 328 ITYTILLCGQCQ-LGNIDMGLVLLKD---MLSRGFELNSIIPCSVMLSGLCKTGRIDEAL 383
Query: 158 -YLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGF 216
+ K + PD+ Y+ VI + G + EM + PN+ T + G
Sbjct: 384 SLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGL 443
Query: 217 YSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPN 276
+ E +L + G + + YN+ I K EA L + +I G P+
Sbjct: 444 CQKGMLLEARSLLDSLISS-GETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPS 502
Query: 277 WVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITK 336
+F+ LI+GYC N+ EA+K+ +K G P Y TL G+ +S E+ +
Sbjct: 503 VATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRR 562
Query: 337 ESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQ 372
E +G P T + GL K ++ ++++
Sbjct: 563 EMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRE 598
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 1/200 (0%)
Query: 175 NTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE 234
+ ++ ++G S+ ++M + + P+ V +S I G KF+ + M +
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 235 KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLD 294
K + P T+ +L LC+ EA++LL +IS G + V ++ +I GY G ++
Sbjct: 427 KR-ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485
Query: 295 EAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
EA ++F + + G P + +L + C+ + A +I G P+ + L+
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
Query: 355 TGLVGVSKTDDAKELIKQVK 374
T EL +++K
Sbjct: 546 DAYANCGNTKSIDELRREMK 565
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 116/247 (46%), Gaps = 15/247 (6%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
Y ++ + A+ F ++ E ITPSV + N+L++ ++ E +I LD K Y +
Sbjct: 478 YAKSGCIEEALELF-KVVIETGITPSVATFNSLIYGYCKTQNIAEARKI-LDVIKLYGLA 535
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGF------------ 216
P V +Y T++ ++A G+T S+ + EM + P VT+S +G
Sbjct: 536 PSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHV 595
Query: 217 YSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPN 276
E+ FE+ + L+ ME + G+ P TYN I LC++K S A L+ M S +
Sbjct: 596 LRERIFEKCKQGLRDMESE-GIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDAS 654
Query: 277 WVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITK 336
+++ LI C G + +A ++++ Y TL C GD E A ++
Sbjct: 655 SATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFH 714
Query: 337 ESMDKGW 343
+ + +G+
Sbjct: 715 QLLHRGF 721
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 14/214 (6%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
K+ ++ ++YN+V+ F E+ VY + + N T+S ++G ++K
Sbjct: 151 KDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKD-------KNEHTYSTVVDGLCRQQKL 203
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
E+ L+ E K + P++ ++N + CKL AK+ ++ G P+ S +
Sbjct: 204 EDAVLFLRTSEWK-DIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNI 262
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLA---HFLCEGGDFESAFEITKESM 339
LI+G C G++ EA ++ +DM K G +P+S Y LA H L G A+E+ ++ +
Sbjct: 263 LINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL---GMISGAWEVIRDML 319
Query: 340 DKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
DKG P+ T L+ G + D L+K +
Sbjct: 320 DKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDM 353
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 130/315 (41%), Gaps = 39/315 (12%)
Query: 97 RNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSR 156
+NE S + + + L +AV F R + I PSV S N+++ + + ++++
Sbjct: 185 KNEHTYSTVVDGLCRQQKLEDAVL-FLRTSEWKDIGPSVVSFNSIM-SGYCKLGFVDMAK 242
Query: 157 IYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGF 216
+ + P V ++N +I GS + + S+M+++ V P++VT++ +GF
Sbjct: 243 SFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGF 302
Query: 217 YSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILS------------------------- 251
+ +V++ M +K G+SP + TY + +
Sbjct: 303 HLLGMISGAWEVIRDMLDK-GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN 361
Query: 252 -----------LCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVF 300
LCK R EA +L M + G P+ V++S +IHG C G D A ++
Sbjct: 362 SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLY 421
Query: 301 ADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGV 360
+M + P S + L LC+ G A + + G + ++ G
Sbjct: 422 DEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKS 481
Query: 361 SKTDDAKELIKQVKE 375
++A EL K V E
Sbjct: 482 GCIEEALELFKVVIE 496
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 126/270 (46%), Gaps = 11/270 (4%)
Query: 106 IVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNY 165
+ L + RM+ +++ +M+D+ + S +S N++L+ ++E +++ D K
Sbjct: 131 LFLSSRLRMVDDSLYILKKMKDQ-NLNVSTQSYNSVLY------HFRETDKMW-DVYKEI 182
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
+ + TY+TV+ L + + P+ V+F++ + G Y + F ++
Sbjct: 183 KDKNE-HTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSG-YCKLGFVDM 240
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
K K G+ P++ ++N+ I LC + +EA L M G +P+ V+++ L
Sbjct: 241 AKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAK 300
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
G+ G + A +V DM +G P+ Y L C+ G+ + + K+ + +G+
Sbjct: 301 GFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFEL 360
Query: 346 N-FTTMKKLVTGLVGVSKTDDAKELIKQVK 374
N +++GL + D+A L Q+K
Sbjct: 361 NSIIPCSVMLSGLCKTGRIDEALSLFNQMK 390
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 128/294 (43%), Gaps = 23/294 (7%)
Query: 55 LTPDFHLDRIA-LSVAISKL-KDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQA 112
L+ F L+ I SV +S L K G ID+ L + D + ++ SIV++G
Sbjct: 354 LSRGFELNSIIPCSVMLSGLCKTGR----IDEALSLFNQMKADGLSPDLVAYSIVIHGLC 409
Query: 113 RM--LPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPD 170
++ A+ + M D+ +I P+ ++ ALL L K +R LD + D
Sbjct: 410 KLGKFDMALWLYDEMCDK-RILPNSRTHGALLLG-LCQKGMLLEARSLLDSLISSGETLD 467
Query: 171 VETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLK 230
+ YN VI +A+SG + + + P+ TF++ I G+ + E K+L
Sbjct: 468 IVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD 527
Query: 231 MMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC-- 288
+++ YG++P++ +Y + + T L + M + G P V++S + G C
Sbjct: 528 VIK-LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRG 586
Query: 289 W----------EGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAF 332
W E ++ K+ DM+ G P+ Y T+ +LC AF
Sbjct: 587 WKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAF 640
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 106/280 (37%), Gaps = 38/280 (13%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
+ PSV S N L+ + E + D K + ++PD TYN + K F G S
Sbjct: 253 LVPSVYSHNILINGLCLVGSIAEALELASDMNK-HGVEPDSVTYNILAKGFHLLGMISGA 311
Query: 191 YSILSEMDRNSVRPNAVTF------------------------------------SNAIE 214
+ ++ +M + P+ +T+ S +
Sbjct: 312 WEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLS 371
Query: 215 GFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRK 274
G + +E + M+ G+SP L Y++ I LCKL + A L M
Sbjct: 372 GLCKTGRIDEALSLFNQMKAD-GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRIL 430
Query: 275 PNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEI 334
PN + L+ G C +G L EA+ + + G + Y + + G E A E+
Sbjct: 431 PNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALEL 490
Query: 335 TKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVK 374
K ++ G P+ T L+ G +A++++ +K
Sbjct: 491 FKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 115/276 (41%), Gaps = 10/276 (3%)
Query: 102 LSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRI---- 157
++ +I+L GQ + L N ++D + LN+++ +++ + RI
Sbjct: 328 ITYTILLCGQCQ-LGNIDMGLVLLKD---MLSRGFELNSIIPCSVMLSGLCKTGRIDEAL 383
Query: 158 -YLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGF 216
+ K + PD+ Y+ VI + G + EM + PN+ T + G
Sbjct: 384 SLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGL 443
Query: 217 YSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPN 276
+ E +L + G + + YN+ I K EA L + +I G P+
Sbjct: 444 CQKGMLLEARSLLDSLISS-GETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPS 502
Query: 277 WVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITK 336
+F+ LI+GYC N+ EA+K+ +K G P Y TL G+ +S E+ +
Sbjct: 503 VATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRR 562
Query: 337 ESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQ 372
E +G P T + GL K ++ ++++
Sbjct: 563 EMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRE 598
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 1/200 (0%)
Query: 175 NTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE 234
+ ++ ++G S+ ++M + + P+ V +S I G KF+ + M +
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 235 KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLD 294
K + P T+ +L LC+ EA++LL +IS G + V ++ +I GY G ++
Sbjct: 427 KR-ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485
Query: 295 EAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
EA ++F + + G P + +L + C+ + A +I G P+ + L+
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
Query: 355 TGLVGVSKTDDAKELIKQVK 374
T EL +++K
Sbjct: 546 DAYANCGNTKSIDELRREMK 565
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 125/258 (48%), Gaps = 10/258 (3%)
Query: 124 RMRDEFQITPSVKSLNALLFAALI---AKDYKEVSRIYL-DFPKNYSIQPDVETYNTVIK 179
R++DE ++ + S+N + +LI K+ VS + L D + P+ T++ +I+
Sbjct: 325 RLKDEM-LSDGI-SMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIE 382
Query: 180 SFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMS 239
F ++G +M+ + P+ I+G+ +K EE LK+ +E +
Sbjct: 383 WFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEA---LKLFDESFETG 439
Query: 240 PALSTYNVRILS-LCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKK 298
A ILS LCK +T EA LL M S G PN VS+++++ G+C + N+D A+
Sbjct: 440 LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARI 499
Query: 299 VFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLV 358
VF+++ ++G KP + Y L D ++A E+ N + ++ GL
Sbjct: 500 VFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLC 559
Query: 359 GVSKTDDAKELIKQVKEK 376
V +T A+EL+ + E+
Sbjct: 560 KVGQTSKARELLANMIEE 577
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 110/243 (45%), Gaps = 1/243 (0%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
I P+V S N ++ K+ +++RI ++P+ TY+ +I + +
Sbjct: 474 IGPNVVSYNNVMLGHCRQKNM-DLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNA 532
Query: 191 YSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRIL 250
+++ M +++ N V + I G + + ++L M E+ + + +YN I
Sbjct: 533 LEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIID 592
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
K A A + M G PN ++++ L++G C +D+A ++ +MK +G K
Sbjct: 593 GFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKL 652
Query: 311 ESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELI 370
+ P Y L C+ + ESA + E +++G P+ L++G + A +L
Sbjct: 653 DIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLY 712
Query: 371 KQV 373
K++
Sbjct: 713 KKM 715
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 100/210 (47%), Gaps = 2/210 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEM-DRNSVRPNAVTFSNAIEGFYSEKKFEE 224
+I+ + Y T+I + G TS +L+ M + + + +++++ I+GF+ E + +
Sbjct: 543 NIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDS 602
Query: 225 VGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLI 284
+ M G+SP + TY + LCK R +A + M + G K + ++ LI
Sbjct: 603 AVAAYEEMCGN-GISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALI 661
Query: 285 HGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWV 344
G+C N++ A +F+++ + G P P Y +L G+ +A ++ K+ + G
Sbjct: 662 DGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLR 721
Query: 345 PNFTTMKKLVTGLVGVSKTDDAKELIKQVK 374
+ T L+ GL+ A EL +++
Sbjct: 722 CDLGTYTTLIDGLLKDGNLILASELYTEMQ 751
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 109/245 (44%), Gaps = 3/245 (1%)
Query: 115 LPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETY 174
+ +AV A+ M I+P+V + +L+ L + + + D KN ++ D+ Y
Sbjct: 600 MDSAVAAYEEMCGN-GISPNVITYTSLM-NGLCKNNRMDQALEMRDEMKNKGVKLDIPAY 657
Query: 175 NTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE 234
+I F + + S ++ SE+ + P+ +++ I GF + + K M
Sbjct: 658 GALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKML- 716
Query: 235 KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLD 294
K G+ L TY I L K A L M + G P+ + ++ +++G +G
Sbjct: 717 KDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFV 776
Query: 295 EAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
+ K+F +MKK P Y + G+ + AF + E +DKG +P+ T LV
Sbjct: 777 KVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Query: 355 TGLVG 359
+G VG
Sbjct: 837 SGQVG 841
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 111/275 (40%), Gaps = 2/275 (0%)
Query: 98 NERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRI 157
N R + + Y + R +AV +M E + P +N L A + E +
Sbjct: 162 NSRAFNYLLNAYSKDRQTDHAVDIVNQML-ELDVIPFFPYVNRTLSALVQRNSLTEAKEL 220
Query: 158 YLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFY 217
Y + D T ++++ + +LS P+++ +S A++
Sbjct: 221 YSRMVA-IGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACC 279
Query: 218 SEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNW 277
+L+ M+EK P+ TY IL+ K +A L M+S G N
Sbjct: 280 KTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNV 339
Query: 278 VSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKE 337
V+ + LI G+C +L A +F M+K G P S + L + + G+ E A E K+
Sbjct: 340 VAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKK 399
Query: 338 SMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQ 372
G P+ + ++ G + K ++A +L +
Sbjct: 400 MEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDE 434
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 109/245 (44%), Gaps = 43/245 (17%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P + T +I + + GS S S+ M ++ + VT++N + G+ K ++ KV
Sbjct: 441 PSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGY---GKTHQLNKV 497
Query: 229 LKMMEE--KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGG-------------- 272
++++E G+SP ++TYN+ I S+ EA ++ +I G
Sbjct: 498 FELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557
Query: 273 ---------------------RKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPE 311
KP+ V+ S L+HGYC +++A +F + G KP+
Sbjct: 558 FSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPD 617
Query: 312 SPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVG---VSKTDDAKE 368
Y TL H C GD E A E+ + +G +PN +T LV GL G V+ A
Sbjct: 618 VVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASM 677
Query: 369 LIKQV 373
L++++
Sbjct: 678 LLEEI 682
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 105/209 (50%), Gaps = 12/209 (5%)
Query: 164 NYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFY----SE 219
++ ++P++ Y++ + + +G +I E+ + P+ V ++ I+G+ ++
Sbjct: 366 SFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTD 425
Query: 220 KKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVS 279
K F+ G +LK G P+L+T + I + + S+A+++ + M + G K + V+
Sbjct: 426 KAFQYFGALLKS-----GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVT 480
Query: 280 FSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESM 339
+++L+HGY L++ ++ +M+ G P+ Y L H + G + A EI E +
Sbjct: 481 YNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELI 540
Query: 340 DKGWVPNFTTMKKLVTGLVGVSKTDDAKE 368
+G+VP+ ++ G SK D +E
Sbjct: 541 RRGFVPSTLAFTDVIGGF---SKRGDFQE 566
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 104/257 (40%), Gaps = 32/257 (12%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
K+Y I+PD+ + I ++G S+L ++ + ++V+ S+ I+GF K
Sbjct: 298 KHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKP 357
Query: 223 EEVGKVLK-----------------------------MMEEKY--GMSPALSTYNVRILS 251
EE K++ + +E + G+ P Y I
Sbjct: 358 EEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDG 417
Query: 252 LCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPE 311
C L RT +A ++ G P+ + + LI G++ +A+ VF +MK G K +
Sbjct: 418 YCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLD 477
Query: 312 SPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIK 371
Y L H + FE+ E G P+ T L+ +V D+A E+I
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIIS 537
Query: 372 Q-VKEKFTESSDKWDEI 387
+ ++ F S+ + ++
Sbjct: 538 ELIRRGFVPSTLAFTDV 554
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 106/258 (41%), Gaps = 5/258 (1%)
Query: 117 NAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNT 176
N T D+F I PS + + L ++ E++R +++ + + +
Sbjct: 218 NMALKLTYKVDQFGIFPS-RGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSL 276
Query: 177 VIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKY 236
I+ + G + +L M +RP+ V F+ I+ +E VL ++ +
Sbjct: 277 FIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLK-LF 335
Query: 237 GMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEA 296
G+S + + I CK+ + EA L+ S +PN +S + C G++ A
Sbjct: 336 GISQDSVSVSSVIDGFCKVGKPEEAIKLIH---SFRLRPNIFVYSSFLSNICSTGDMLRA 392
Query: 297 KKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTG 356
+F ++ + G P+ CY T+ C G + AF+ + G P+ TT L+
Sbjct: 393 STIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGA 452
Query: 357 LVGVSKTDDAKELIKQVK 374
DA+ + + +K
Sbjct: 453 CSRFGSISDAESVFRNMK 470
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 109/245 (44%), Gaps = 43/245 (17%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P + T +I + + GS S S+ M ++ + VT++N + G+ K ++ KV
Sbjct: 441 PSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGY---GKTHQLNKV 497
Query: 229 LKMMEE--KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGG-------------- 272
++++E G+SP ++TYN+ I S+ EA ++ +I G
Sbjct: 498 FELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557
Query: 273 ---------------------RKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPE 311
KP+ V+ S L+HGYC +++A +F + G KP+
Sbjct: 558 FSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPD 617
Query: 312 SPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVG---VSKTDDAKE 368
Y TL H C GD E A E+ + +G +PN +T LV GL G V+ A
Sbjct: 618 VVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASM 677
Query: 369 LIKQV 373
L++++
Sbjct: 678 LLEEI 682
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 105/209 (50%), Gaps = 12/209 (5%)
Query: 164 NYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFY----SE 219
++ ++P++ Y++ + + +G +I E+ + P+ V ++ I+G+ ++
Sbjct: 366 SFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTD 425
Query: 220 KKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVS 279
K F+ G +LK G P+L+T + I + + S+A+++ + M + G K + V+
Sbjct: 426 KAFQYFGALLKS-----GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVT 480
Query: 280 FSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESM 339
+++L+HGY L++ ++ +M+ G P+ Y L H + G + A EI E +
Sbjct: 481 YNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELI 540
Query: 340 DKGWVPNFTTMKKLVTGLVGVSKTDDAKE 368
+G+VP+ ++ G SK D +E
Sbjct: 541 RRGFVPSTLAFTDVIGGF---SKRGDFQE 566
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 104/257 (40%), Gaps = 32/257 (12%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
K+Y I+PD+ + I ++G S+L ++ + ++V+ S+ I+GF K
Sbjct: 298 KHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKP 357
Query: 223 EEVGKVLK-----------------------------MMEEKY--GMSPALSTYNVRILS 251
EE K++ + +E + G+ P Y I
Sbjct: 358 EEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDG 417
Query: 252 LCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPE 311
C L RT +A ++ G P+ + + LI G++ +A+ VF +MK G K +
Sbjct: 418 YCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLD 477
Query: 312 SPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIK 371
Y L H + FE+ E G P+ T L+ +V D+A E+I
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIIS 537
Query: 372 Q-VKEKFTESSDKWDEI 387
+ ++ F S+ + ++
Sbjct: 538 ELIRRGFVPSTLAFTDV 554
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 106/258 (41%), Gaps = 5/258 (1%)
Query: 117 NAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNT 176
N T D+F I PS + + L ++ E++R +++ + + +
Sbjct: 218 NMALKLTYKVDQFGIFPS-RGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSL 276
Query: 177 VIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKY 236
I+ + G + +L M +RP+ V F+ I+ +E VL ++ +
Sbjct: 277 FIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLK-LF 335
Query: 237 GMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEA 296
G+S + + I CK+ + EA L+ S +PN +S + C G++ A
Sbjct: 336 GISQDSVSVSSVIDGFCKVGKPEEAIKLIH---SFRLRPNIFVYSSFLSNICSTGDMLRA 392
Query: 297 KKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTG 356
+F ++ + G P+ CY T+ C G + AF+ + G P+ TT L+
Sbjct: 393 STIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGA 452
Query: 357 LVGVSKTDDAKELIKQVK 374
DA+ + + +K
Sbjct: 453 CSRFGSISDAESVFRNMK 470
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 2/224 (0%)
Query: 157 IYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGF 216
+ LD K + I PDV Y+ +I+ ++ + + ++M + R N V S+ ++ +
Sbjct: 313 VVLDMEK-HGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCY 371
Query: 217 YSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPN 276
F E + K E +S YNV +L KL + EA L + M G P+
Sbjct: 372 CQMGNFSEAYDLFKEFRET-NISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPD 430
Query: 277 WVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITK 336
++++ LI G C +G +A + +M G P+ Y LA L G + AFE K
Sbjct: 431 VINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLK 490
Query: 337 ESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTES 380
++G P + T ++ GL+ + D A+ + ++ K E+
Sbjct: 491 MMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSREN 534
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 8/181 (4%)
Query: 165 YSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEE 224
+ + PDV Y +I + VY++ +M R + P+ VT++ ++ K
Sbjct: 692 FDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN----KPERN 747
Query: 225 VGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLI 284
+ + +K + K P + Y V I CK+ EAK + MI G P+ ++ LI
Sbjct: 748 LSREMKAFDVK----PDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALI 803
Query: 285 HGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWV 344
C G L EAK +F M + G KP+ Y L C G A ++ KE ++KG
Sbjct: 804 ACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIK 863
Query: 345 P 345
P
Sbjct: 864 P 864
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 105/269 (39%), Gaps = 36/269 (13%)
Query: 136 KSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILS 195
KS+ L A + +R + + I PD+ TY +I ++ Y++
Sbjct: 600 KSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFE 659
Query: 196 EMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKL 255
+M R V+P+ VT+S + S+ + + +K E + + P + Y + I C L
Sbjct: 660 DMKRRDVKPDVVTYSVLLN---SDPELD-----MKREMEAFDVIPDVVYYTIMINRYCHL 711
Query: 256 KRTSEAKALLQGMI----------------------------SGGRKPNWVSFSHLIHGY 287
+ AL + M + KP+ ++ LI
Sbjct: 712 NDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQ 771
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
C G+L EAK++F M + G P++ Y L C+ G + A I ++ G P+
Sbjct: 772 CKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDV 831
Query: 348 TTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
L+ G A +L+K++ EK
Sbjct: 832 VPYTALIAGCCRNGFVLKAVKLVKEMLEK 860
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 93/244 (38%), Gaps = 38/244 (15%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
I PDV Y T+I G S + ++ EMD P+ V ++ G + +E
Sbjct: 426 GIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEA 485
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
+ LKMME + G+ P T+N+ I L +A+A + + R+ + + ++
Sbjct: 486 FETLKMMENR-GVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSREND----ASMVK 540
Query: 286 GYCWEGNLD---------------------------------EAKKVFADMKKRGYKPES 312
G+C G LD +A+ + M K G +PE
Sbjct: 541 GFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEK 600
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQ 372
Y L C + A E + + K VP+ T ++ +++ A L +
Sbjct: 601 SMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFED 660
Query: 373 VKEK 376
+K +
Sbjct: 661 MKRR 664
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 95/221 (42%), Gaps = 7/221 (3%)
Query: 161 FPKNYSI--QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYS 218
F YS+ PD++ N +I SG + V E++R + +A T+ ++ +
Sbjct: 170 FRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWR 229
Query: 219 EKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGM----ISGGRK 274
EE+ K+L + +P + N I LC + T A LLQ + I +
Sbjct: 230 NDDKEELEKLLSRLLISETRNPCVFYLNF-IEGLCLNQMTDIAYFLLQPLRDANILVDKS 288
Query: 275 PNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEI 334
+++ ++ G C+E +++A+ V DM+K G P+ Y + + + A ++
Sbjct: 289 DLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDV 348
Query: 335 TKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
+ + K N + ++ + +A +L K+ +E
Sbjct: 349 FNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRE 389
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 134/291 (46%), Gaps = 8/291 (2%)
Query: 105 SIVL--YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFP 162
SIV+ + R A + F ++D F+ P V L+ A + E +++ +
Sbjct: 225 SIVISNLSRKRRASEAQSFFDSLKDRFE--PDVIVYTNLVRGWCRAGEISEAEKVFKEM- 281
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
K I+P+V TY+ VI + G S + + ++M + PNA+TF+N + +
Sbjct: 282 KLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRT 341
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
E+V +V M+ K G P TYN I + C+ + A +L MI + N +F+
Sbjct: 342 EKVLQVYNQMK-KLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNT 400
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
+ + +++ A ++++ M + +P + Y L + ++ KE DK
Sbjct: 401 IFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKE 460
Query: 343 WVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK--FTESSDKWDEIEAEL 391
PN T + LVT G+ ++A +L K++ E+ T S ++ + A+L
Sbjct: 461 VEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQL 511
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 118/271 (43%), Gaps = 4/271 (1%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
Y +A + AV F RM D + P K +++ + L K ++ + D K+ +
Sbjct: 196 YVRAGLASEAVHCFNRMED-YGCVPD-KIAFSIVISNLSRKRRASEAQSFFDSLKD-RFE 252
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
PDV Y +++ + +G S + EM + PN T+S I+ + V
Sbjct: 253 PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDV 312
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
M + G +P T+N + K RT + + M G +P+ ++++ LI +C
Sbjct: 313 FADMLDS-GCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHC 371
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
+ NL+ A KV M K+ + + + T+ ++ + D A + + M+ PN
Sbjct: 372 RDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTV 431
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQVKEKFTE 379
T L+ VG TD ++ K++ +K E
Sbjct: 432 TYNILMRMFVGSKSTDMVLKMKKEMDDKEVE 462
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 149/370 (40%), Gaps = 50/370 (13%)
Query: 22 TPLTAKEKSRTALHLLKSETNPERILDICRAASLTPDFHLDRIALSVAISKLKDGNHFST 81
+PL K S +A LL N E AA++T A+SV IS L T
Sbjct: 18 SPLLPKTFSTSATSLLSDHENDES------AATITA-------AVSVPISPLLTPEDTQT 64
Query: 82 IDQF---LRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSL 138
+++F ++D P N+ L+ S+ L+ + T+ Q++PSV
Sbjct: 65 VEKFHSIIKDHYRKNPTSPNDAILNPSLTLHALSLDFSQIETS--------QVSPSV--- 113
Query: 139 NALLFAALIAKDYKEVSRIYLDFPKNYSI-------------QPDVETYNTVIKSFAESG 185
+I K + P + S+ YN +I +
Sbjct: 114 ----VRCVIEK----CGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVR 165
Query: 186 STSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTY 245
+ ++ M +V + TF+ I + E ME+ YG P +
Sbjct: 166 QFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMED-YGCVPDKIAF 224
Query: 246 NVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKK 305
++ I +L + +R SEA++ + +P+ + +++L+ G+C G + EA+KVF +MK
Sbjct: 225 SIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKL 283
Query: 306 RGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDD 365
G +P Y + LC G A ++ + +D G PN T L+ V +T+
Sbjct: 284 AGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEK 343
Query: 366 AKELIKQVKE 375
++ Q+K+
Sbjct: 344 VLQVYNQMKK 353
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
+P+ TYN +++ F S ST V + EMD V PN T+ + F + K
Sbjct: 427 EPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYK 486
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGG 272
+ K M E+ ++P+LS Y + + L + + + + L++ MI G
Sbjct: 487 LFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKG 531
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 115/275 (41%), Gaps = 35/275 (12%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRI--YLDFPKNYSIQPDVETYNTVIKSFAESGSTS 188
++P V +LN L+ + + +V R+ + +N I D TYNTVI E G
Sbjct: 125 VSPDVFALNVLIHS------FCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLAD 178
Query: 189 SVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF-------EEVGKV------------- 228
Y LSEM + + P+ V+++ I+GF F +E+ ++
Sbjct: 179 EAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYY 238
Query: 229 -LKMMEEKY------GMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFS 281
L +EE Y G P + T++ I LCK + E LL+ M PN V+++
Sbjct: 239 NLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYT 298
Query: 282 HLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDK 341
L+ A +++ M RG + Y L L + GD A + K ++
Sbjct: 299 TLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLED 358
Query: 342 GWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
VPN T LV GL A+ +I Q+ EK
Sbjct: 359 NQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEK 393
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 127/291 (43%), Gaps = 38/291 (13%)
Query: 121 AFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKS 180
A+ MR++ I P + + N ++ + D + + +++ D K+ I+P + + N V+
Sbjct: 560 AYKGMREK-GIEPDIATFNIMMNSQRKQGDSEGILKLW-DKMKSCGIKPSLMSCNIVVGM 617
Query: 181 FAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSP 240
E+G IL++M + PN T+ ++ K+ + + K + + YG+
Sbjct: 618 LCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLS-YGIKL 676
Query: 241 ALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW----------- 289
+ YN I +LCKL T +A ++ M + G P+ V+F+ L+HGY
Sbjct: 677 SRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTY 736
Query: 290 ------------------------EGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEG 325
G + E K ++MK RG +P+ Y L +
Sbjct: 737 SVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKI 796
Query: 326 GDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
G+ + + I E + G VP +T L++ V K A+EL+K++ ++
Sbjct: 797 GNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKR 847
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 1/204 (0%)
Query: 164 NYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFE 223
+Y I+ + YNT+I + + G T ++ +M+ P+ VTF++ + G++
Sbjct: 671 SYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVR 730
Query: 224 EVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHL 283
+ +M E G+SP ++TYN I L E L M S G +P+ +++ L
Sbjct: 731 KALSTYSVMMEA-GISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNAL 789
Query: 284 IHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGW 343
I G GN+ + ++ +M G P++ Y L G A E+ KE +G
Sbjct: 790 ISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGV 849
Query: 344 VPNFTTMKKLVTGLVGVSKTDDAK 367
PN +T +++GL + D +
Sbjct: 850 SPNTSTYCTMISGLCKLCTHPDVE 873
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 1/211 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
S+ P+ TY T++ S ++ ++ S+M + + V ++ ++G + E
Sbjct: 289 SVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREA 348
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
K KM+ E P + TY + LCK S A+ ++ M+ PN V++S +I+
Sbjct: 349 EKTFKMLLED-NQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMIN 407
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
GY +G L+EA + M+ + P Y T+ L + G E A E++KE G
Sbjct: 408 GYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEE 467
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
N + LV L + + + K L+K + K
Sbjct: 468 NNYILDALVNHLKRIGRIKEVKGLVKDMVSK 498
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 18/220 (8%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEK-KFEE 224
I+PD+ T+N ++ S + G + + + +M ++P+ ++ N + G E K EE
Sbjct: 568 GIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMS-CNIVVGMLCENGKMEE 626
Query: 225 VGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLI 284
+L M + P L+TY + + + K KR + ++S G K + ++ LI
Sbjct: 627 AIHILNQMM-LMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLI 685
Query: 285 HGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWV 344
C G +A V DM+ RG+ P++ + +L H G A M+ G
Sbjct: 686 ATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGIS 745
Query: 345 PNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTESSDKW 384
PN T ++ GL DA LIK+V DKW
Sbjct: 746 PNVATYNTIIRGL------SDAG-LIKEV--------DKW 770
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 110/240 (45%), Gaps = 14/240 (5%)
Query: 115 LPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETY 174
L A F + ++ Q+ P+V + AL+ A D I + S+ P+V TY
Sbjct: 345 LREAEKTFKMLLEDNQV-PNVVTYTALVDGLCKAGDLSSAEFIITQMLEK-SVIPNVVTY 402
Query: 175 NTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFE---EVGKVLKM 231
+++I + + G S+L +M+ +V PN T+ I+G + K E E+ K +++
Sbjct: 403 SSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRL 462
Query: 232 M--EEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW 289
+ EE + AL + L ++ R E K L++ M+S G + ++++ LI +
Sbjct: 463 IGVEENNYILDALVNH------LKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFK 516
Query: 290 EGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTT 349
G+ + A +M++RG + Y L + + G + + K +KG P+ T
Sbjct: 517 GGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWA-YKGMREKGIEPDIAT 575
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 118 AVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTV 177
A++ ++ M E I+P+V + N ++ A KEV + +L K+ ++PD TYN +
Sbjct: 732 ALSTYSVMM-EAGISPNVATYNTIIRGLSDAGLIKEVDK-WLSEMKSRGMRPDDFTYNAL 789
Query: 178 IKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYG 237
I A+ G+ +I EM + + P T++ I F + K + ++LK M ++ G
Sbjct: 790 ISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKR-G 848
Query: 238 MSPALSTYNVRILSLCKL------------KRTSEAKALLQGMI 269
+SP STY I LCKL +EAK LL+ M+
Sbjct: 849 VSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMV 892
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 237 GMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEA 296
G+SP + NV I S CK+ R S A +LL+ + + V+++ +I G C G DEA
Sbjct: 124 GVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVI---SIDTVTYNTVISGLCEHGLADEA 180
Query: 297 KKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKE 337
+ ++M K G P++ Y TL C+ G+F A + E
Sbjct: 181 YQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDE 221
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 115/242 (47%), Gaps = 6/242 (2%)
Query: 136 KSLNALLFAALI---AKDYKEVSRIY-LDFPKNYSIQPDVETYNTVIKSFAESGSTSSVY 191
K LN F ++ A+ K IY + + Y + P++ +N ++ + +S +
Sbjct: 164 KMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQ 223
Query: 192 SILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILS 251
+ M R+ P++ T+S +EG+ E + +V + M + G P + TY++ +
Sbjct: 224 EVFENM-RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDA-GCHPDIVTYSIMVDI 281
Query: 252 LCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPE 311
LCK R EA +++ M KP +S L+H Y E L+EA F +M++ G K +
Sbjct: 282 LCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKAD 341
Query: 312 SPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIK 371
+ +L C+ ++ + + KE KG PN + ++ L+ + D+A ++ +
Sbjct: 342 VAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFR 401
Query: 372 QV 373
++
Sbjct: 402 KM 403
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 4/175 (2%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
YG L AV F M + + V N+L+ A A K V R+ L K+ +
Sbjct: 317 YGTENRLEEAVDTFLEM-ERSGMKADVAVFNSLIGAFCKANRMKNVYRV-LKEMKSKGVT 374
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P+ ++ N +++ E G + + +M + P+A T++ I+ F +K+ E KV
Sbjct: 375 PNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKKEMETADKV 433
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHL 283
K M +K G+ P++ T++V I LC+ + T +A LL+ MI G +P+ V+F L
Sbjct: 434 WKYMRKK-GVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRL 487
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 131/329 (39%), Gaps = 71/329 (21%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDF------- 161
Y +A+ + A+ AF M +++ + P++ + N LL A +K+ ++ ++ +
Sbjct: 178 YARAQKVDEAIYAFNVM-EKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPD 236
Query: 162 PKNYSI--------------------------QPDVETYNTVIKSFAESGSTSSVYSILS 195
K YSI PD+ TY+ ++ ++G I+
Sbjct: 237 SKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVR 296
Query: 196 EMDRNSVRPNAVTFSNAIEGFYSEKKFEE-VGKVLKMMEEKYGMSPALSTYNVRILSLCK 254
MD + +P +S + + +E + EE V L+M E+ GM ++ +N I + CK
Sbjct: 297 SMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEM--ERSGMKADVAVFNSLIGAFCK 354
Query: 255 LKRTSEAKALLQGMISGGRKPNWVS----------------------------------F 280
R +L+ M S G PN S +
Sbjct: 355 ANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDADTY 414
Query: 281 SHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMD 340
+ +I +C + ++ A KV+ M+K+G P + L + LCE + A + +E ++
Sbjct: 415 TMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIE 474
Query: 341 KGWVPNFTTMKKLVTGLVGVSKTDDAKEL 369
G P+ T +L L+ + D K L
Sbjct: 475 MGIRPSGVTFGRLRQLLIKEEREDVLKFL 503
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 87/207 (42%), Gaps = 2/207 (0%)
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL 229
+VET+ V++ +A + + M++ + PN V F+ + K + +V
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 230 KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW 289
+ M +++ +P TY++ + K +A+ + + MI G P+ V++S ++ C
Sbjct: 227 ENMRDRF--TPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCK 284
Query: 290 EGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTT 349
G +DEA + M KP + Y L H E A + E G +
Sbjct: 285 AGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAV 344
Query: 350 MKKLVTGLVGVSKTDDAKELIKQVKEK 376
L+ ++ + ++K++K K
Sbjct: 345 FNSLIGAFCKANRMKNVYRVLKEMKSK 371
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 117/262 (44%), Gaps = 4/262 (1%)
Query: 100 RFLSQSIVLYGQARMLPNAVTAFTR-MRDEFQITPSVKSLNALLFAALIAKDYKEVSRIY 158
+F + + YG ++ + V F ++ + P + LL A A D +S ++
Sbjct: 86 KFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPD-SSISNVH 144
Query: 159 --LDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGF 216
L+ N ++PD T + ++S E+G ++ E+ P+ T++ ++
Sbjct: 145 RVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHL 204
Query: 217 YSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPN 276
K V + + M + + + P L ++ + I ++C K EA L+ + + G KP+
Sbjct: 205 CKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPD 264
Query: 277 WVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITK 336
++ ++ G+C EA V+ MK+ G +P+ Y TL L + G E A K
Sbjct: 265 CFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLK 324
Query: 337 ESMDKGWVPNFTTMKKLVTGLV 358
+D G+ P+ T L+ G+
Sbjct: 325 TMVDAGYEPDTATYTSLMNGMC 346
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 2/159 (1%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEM-DRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
PD TYN ++K + VY + EM D V+P+ V+F+ I+ + K E
Sbjct: 192 PDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMY 251
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
++ + G P YN + C L + SEA + + M G +P+ ++++ LI G
Sbjct: 252 LVSKLGNA-GFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGL 310
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGG 326
G ++EA+ M GY+P++ Y +L + +C G
Sbjct: 311 SKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 2/193 (1%)
Query: 182 AESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPA 241
A S S+V+ +L+ M N + P+ VT A+ + +E ++K + EK+ P
Sbjct: 135 APDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHS-PPD 193
Query: 242 LSTYNVRILSLCKLKRTSEAKALLQGMISG-GRKPNWVSFSHLIHGYCWEGNLDEAKKVF 300
TYN + LCK K + M KP+ VSF+ LI C NL EA +
Sbjct: 194 TYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLV 253
Query: 301 ADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGV 360
+ + G+KP+ Y T+ C A + K+ ++G P+ T L+ GL
Sbjct: 254 SKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKA 313
Query: 361 SKTDDAKELIKQV 373
+ ++A+ +K +
Sbjct: 314 GRVEEARMYLKTM 326
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 127/283 (44%), Gaps = 18/283 (6%)
Query: 106 IVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNY 165
I + G+ + +A F ++++ + V S +L+ A + Y+E ++ ++
Sbjct: 180 ISMLGKEGRVSSAANMFNGLQED-GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED- 237
Query: 166 SIQPDVETYNTVIKSFAESGST-SSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEE 224
+P + TYN ++ F + G+ + + S++ +M + + P+A T++ I +E
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 225 VGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLI 284
+V + M+ G S TYN + K R EA +L M+ G P+ V+++ LI
Sbjct: 298 AAQVFEEMKAA-GFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLI 356
Query: 285 HGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWV 344
Y +G LDEA ++ M ++G KP+ Y TL G ESA I +E + G
Sbjct: 357 SAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCK 416
Query: 345 PNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTESSDKWDEI 387
PN T + + + KFTE +DEI
Sbjct: 417 PNICTFNAFIK--------------MYGNRGKFTEMMKIFDEI 445
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 133/304 (43%), Gaps = 38/304 (12%)
Query: 106 IVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNY 165
I Y + A+T + RM D +TP + + N +L AAL E S L ++
Sbjct: 496 ISAYSRCGSFEQAMTVYRRMLDA-GVTPDLSTYNTVL-AALARGGMWEQSEKVLAEMEDG 553
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAV------------------ 207
+P+ TY +++ ++A ++S+ E+ + P AV
Sbjct: 554 RCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEA 613
Query: 208 ----------------TFSNAIEGFYSEKKF-EEVGKVLKMMEEKYGMSPALSTYNVRIL 250
T N++ Y ++ + VL M+E+ G +P+++TYN +
Sbjct: 614 ERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKER-GFTPSMATYNSLMY 672
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
+ +++ +L+ +++ G KP+ +S++ +I+ YC + +A ++F++M+ G P
Sbjct: 673 MHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVP 732
Query: 311 ESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELI 370
+ Y T FE A + + + G PN T +V G +++ D+AK +
Sbjct: 733 DVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFV 792
Query: 371 KQVK 374
+ ++
Sbjct: 793 EDLR 796
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 1/187 (0%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
+PDV TY T++ F +G S SI EM +PN TF+ I+ + + KF E+ K
Sbjct: 381 KPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMK 440
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
+ + G+SP + T+N + + SE + + M G P +F+ LI Y
Sbjct: 441 IFDEIN-VCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
G+ ++A V+ M G P+ Y T+ L GG +E + ++ E D PN
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 348 TTMKKLV 354
T L+
Sbjct: 560 LTYCSLL 566
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 105/239 (43%), Gaps = 2/239 (0%)
Query: 137 SLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSE 196
+ NALL + KE ++ + N P + TYN++I ++A G + ++
Sbjct: 316 TYNALLDVYGKSHRPKEAMKVLNEMVLN-GFSPSIVTYNSLISAYARDGMLDEAMELKNQ 374
Query: 197 MDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLK 256
M +P+ T++ + GF K E + + M G P + T+N I
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA-GCKPNICTFNAFIKMYGNRG 433
Query: 257 RTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYF 316
+ +E + + G P+ V+++ L+ + G E VF +MK+ G+ PE +
Sbjct: 434 KFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFN 493
Query: 317 TLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
TL G FE A + + +D G P+ +T ++ L + +++++ ++++
Sbjct: 494 TLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 100/219 (45%), Gaps = 4/219 (1%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
K+Y D +I + G SS ++ + + + + ++++ I F + ++
Sbjct: 165 KDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRY 224
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRT-SEAKALLQGMISGGRKPNWVSFS 281
E V K MEE G P L TYNV + K+ ++ +L++ M S G P+ +++
Sbjct: 225 REAVNVFKKMEED-GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYN 283
Query: 282 HLIHGYCWEGNL-DEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMD 340
LI C G+L EA +VF +MK G+ + Y L + + A ++ E +
Sbjct: 284 TLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVL 342
Query: 341 KGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTE 379
G+ P+ T L++ D+A EL Q+ EK T+
Sbjct: 343 NGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTK 381
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 113/271 (41%), Gaps = 3/271 (1%)
Query: 106 IVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNY 165
I Y + ML A+ +M ++ P V + LL A + I+ + +N
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEK-GTKPDVFTYTTLLSGFERAGKVESAMSIFEEM-RNA 413
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
+P++ T+N IK + G + + I E++ + P+ VT++ + F EV
Sbjct: 414 GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEV 473
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
V K M+ + G P T+N I + + +A + + M+ G P+ +++ ++
Sbjct: 474 SGVFKEMK-RAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLA 532
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
G ++++KV A+M+ KP Y +L H G + + +E P
Sbjct: 533 ALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEP 592
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+K LV +A+ ++KE+
Sbjct: 593 RAVLLKTLVLVCSKCDLLPEAERAFSELKER 623
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 145/336 (43%), Gaps = 20/336 (5%)
Query: 32 TALHLLKSETNPERILDICRAASLTPDFHLDRIALSVAISKLKDGNHFSTIDQFLRDLPT 91
T + ++S TNPE + +C+ + F LDR +V D +H ++ R
Sbjct: 117 TGVSCVESSTNPEEVERVCKV--IDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHA 174
Query: 92 SRPDLR-------------NERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSL 138
+P R + R + + + + R V+ M + +T ++
Sbjct: 175 RKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTI 234
Query: 139 NALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMD 198
FAA AK+ K+ I+ + K Y + VET N ++ S + + ++
Sbjct: 235 AMKAFAA--AKERKKAVGIF-ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL- 290
Query: 199 RNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRT 258
+ PN +T++ + G+ + E ++ M ++ G+ P + +NV + L + ++
Sbjct: 291 KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQ-GLKPDIVAHNVMLEGLLRSRKK 349
Query: 259 SEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTL 318
S+A L M S G PN S++ +I +C + +++ A + F DM G +P++ Y L
Sbjct: 350 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 409
Query: 319 AHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
++ +E+ KE +KG P+ T L+
Sbjct: 410 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALI 445
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 118/254 (46%), Gaps = 9/254 (3%)
Query: 95 DLRNERF----LSQSIVLYGQARM--LPNAVTAFTRMRDEFQITPSVKSLNALLFAALIA 148
D ERF ++ +++L G R+ L A + M D+ + P + + N +L L +
Sbjct: 288 DKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQ-GLKPDIVAHNVMLEGLLRS 346
Query: 149 KDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVT 208
+ + +++ K+ P+V +Y +I+ F + S + +M + ++P+A
Sbjct: 347 RKKSDAIKLF-HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAV 405
Query: 209 FSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGM 268
++ I GF ++KK + V ++LK M+EK G P TYN I + K A + M
Sbjct: 406 YTCLITGFGTQKKLDTVYELLKEMQEK-GHPPDGKTYNALIKLMANQKMPEHATRIYNKM 464
Query: 269 ISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDF 328
I +P+ +F+ ++ Y N + + V+ +M K+G P+ Y L L G
Sbjct: 465 IQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKS 524
Query: 329 ESAFEITKESMDKG 342
A +E +DKG
Sbjct: 525 REACRYLEEMLDKG 538
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 107/242 (44%), Gaps = 38/242 (15%)
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL 229
D TYN+++ A++ ++ S+L EM + TF+ A++ F + K+ ++ +
Sbjct: 194 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIF 252
Query: 230 KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW 289
++M +KY + T N + SL + K EA+ L + PN ++++ L++G+C
Sbjct: 253 ELM-KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK-LKERFTPNMMTYTVLLNGWCR 310
Query: 290 EGNLDEAKKVFADMKKRGYKPE------------------------------SPC----- 314
NL EA +++ DM +G KP+ PC
Sbjct: 311 VRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRS 370
Query: 315 YFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVK 374
Y + C+ E+A E + +D G P+ L+TG K D EL+K+++
Sbjct: 371 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ 430
Query: 375 EK 376
EK
Sbjct: 431 EK 432
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 112/251 (44%), Gaps = 18/251 (7%)
Query: 82 IDQFLRDLPTSRPDLRNERFLSQSIVLYG--QARMLPNAVTAFTRMRDEFQITPSVKSLN 139
IDQ L+ PD+ ++ +++L G ++R +A+ F M+ + P+V+S
Sbjct: 325 IDQGLK------PDI-----VAHNVMLEGLLRSRKKSDAIKLFHVMKSK-GPCPNVRSYT 372
Query: 140 ALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDR 199
++ + E + Y D + +QPD Y +I F +VY +L EM
Sbjct: 373 -IMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQE 431
Query: 200 NSVRPNAVTFSNAIEGFYSEKKFEEVGKVL-KMMEEKYGMSPALSTYNVRILSLCKLKRT 258
P+ T++ I+ ++K E ++ KM++ + + P++ T+N+ + S +
Sbjct: 432 KGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNE--IEPSIHTFNMIMKSYFMARNY 489
Query: 259 SEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTL 318
+A+ + MI G P+ S++ LI G EG EA + +M +G K Y
Sbjct: 490 EMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKF 549
Query: 319 AHFLCEGGDFE 329
A GG E
Sbjct: 550 AADFHRGGQPE 560
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 143/320 (44%), Gaps = 14/320 (4%)
Query: 62 DRIALSVAISKLKDGNHFSTIDQFLRD--LPTSRPDLRNERFLSQSIVLYGQARMLPNAV 119
D I ++ I L H T L D L S PD+ + + + YG NA
Sbjct: 173 DTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYG------NAE 226
Query: 120 TAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ---PDVETYNT 176
A +D+ Q + + L+ + Y +R ++ ++ +++ PD+ TYN+
Sbjct: 227 QAIRFWKDQLQNGCPPFMITYTVLVELVCR-YCGSARA-IEVLEDMAVEGCYPDIVTYNS 284
Query: 177 VIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKY 236
++ G+ V S++ + + + N VT++ + S + ++EV ++L +M +
Sbjct: 285 LVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQT- 343
Query: 237 GMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEA 296
P + TYN+ I LCK + S A M+ P+ V+++ ++ EG +D+A
Sbjct: 344 SYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDA 403
Query: 297 KKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTG 356
++ +K P Y ++ L + G + A E+ + +D G P+ T + L+ G
Sbjct: 404 IELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYG 463
Query: 357 LVGVSKTDDAKELIKQVKEK 376
+ ++A +++K+ +
Sbjct: 464 FCRANLVEEAGQVLKETSNR 483
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 1/208 (0%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
PD TYN +I + + G + +L +M + P+ +T++ I + E+ +
Sbjct: 172 PDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRF 231
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
K + + G P + TY V + +C+ ++ A +L+ M G P+ V+++ L++ C
Sbjct: 232 WKD-QLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNC 290
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
GNL+E V + G + + Y TL H LC ++ EI + P
Sbjct: 291 RRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVI 350
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQVKEK 376
T L+ GL A + Q+ E+
Sbjct: 351 TYNILINGLCKARLLSRAIDFFYQMLEQ 378
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 2/219 (0%)
Query: 139 NALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMD 198
N LL + + + EV I L+ S P V TYN +I ++ S +M
Sbjct: 318 NTLLHSLCSHEYWDEVEEI-LNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQML 376
Query: 199 RNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRT 258
P+ VT++ + E ++ ++L +++ P L TYN I L K
Sbjct: 377 EQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTC-CPPGLITYNSVIDGLAKKGLM 435
Query: 259 SEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTL 318
+A L M+ G P+ ++ LI+G+C ++EA +V + RG Y +
Sbjct: 436 KKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLV 495
Query: 319 AHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGL 357
LC+ + E A E+ + + G P+ T +V G+
Sbjct: 496 IQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGV 534
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 98/233 (42%), Gaps = 15/233 (6%)
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL 229
D ET N ++ + +G + ++ M R++ P+ + SN + G + ++ +L
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 230 KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW 289
++M G+ P TYN+ I +LCK A LL+ M G P+ ++++ +I
Sbjct: 163 RVMVMSGGV-PDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFD 221
Query: 290 EGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTT 349
GN ++A + + D + G P Y L +C A E+ ++ +G P+ T
Sbjct: 222 YGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVT 281
Query: 350 MKKLVTGLVGVSKTDDAKELIKQVKEKFTE--------------SSDKWDEIE 388
LV ++ +I+ + E S + WDE+E
Sbjct: 282 YNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVE 334
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 116/230 (50%), Gaps = 2/230 (0%)
Query: 151 YKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFS 210
Y + +L+ K+Y ++ D N+++ + + S + + ++ ++++P+A TF+
Sbjct: 219 YNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKL-FDTIKPDARTFN 277
Query: 211 NAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMIS 270
I GF +KF++ ++ +M+ +P + TY + + CK +L+ M
Sbjct: 278 ILIHGFCKARKFDDARAMMDLMKVT-EFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRE 336
Query: 271 GGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFES 330
G PN V+++ ++H + EA V+ MK+ G P++ Y +L H L + G F+
Sbjct: 337 NGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKD 396
Query: 331 AFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTES 380
A EI ++ ++G + +++ + S+ + A L+K+++++ ES
Sbjct: 397 AAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGES 446
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 108/281 (38%), Gaps = 42/281 (14%)
Query: 115 LPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETY 174
+ +A F ++ D I P ++ N L+ A+ + + +R +D K PDV TY
Sbjct: 255 IEHAHEVFLKLFD--TIKPDARTFNILIHGFCKARKFDD-ARAMMDLMKVTEFTPDVVTY 311
Query: 175 NTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE 234
+ ++++ + G V +L EM N PN VT++ + K+ E V + M+E
Sbjct: 312 TSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKE 371
Query: 235 KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLD 294
G P Y+ I L K R +A + + M + G + + + ++ +I +
Sbjct: 372 D-GCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDE 430
Query: 295 EAKKVFADMKKRGYKPESP--------------------------------------CYF 316
A ++ M+ + SP Y
Sbjct: 431 MALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYI 490
Query: 317 TLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGL 357
L LC G E A +E++ KG VP +T K LV L
Sbjct: 491 LLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDEL 531
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 117/251 (46%), Gaps = 8/251 (3%)
Query: 125 MRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAES 184
+RD Q P+ + N L+ + A E ++ + +PD TY T+I A++
Sbjct: 391 VRDGCQ--PNTVTYNRLIHSYGRANYLNEAMNVFNQM-QEAGCKPDRVTYCTLIDIHAKA 447
Query: 185 GSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALST 244
G + M + P+ T+S I K+ M ++ G +P L T
Sbjct: 448 GFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQ-GCTPNLVT 506
Query: 245 YNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH--GYCWEGNLDEAKKVFAD 302
YN+ + K + A L + M + G +P+ V++S ++ G+C G L+EA+ VF +
Sbjct: 507 YNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLEEAEAVFTE 564
Query: 303 MKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSK 362
M+++ + P+ P Y L + G+ E A++ + + G PN T L++ + V+K
Sbjct: 565 MQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNK 624
Query: 363 TDDAKELIKQV 373
+A EL++ +
Sbjct: 625 IAEAYELLQNM 635
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 106/250 (42%), Gaps = 11/250 (4%)
Query: 127 DEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGS 186
D +Q +K +N DY + + + D TY T++ + +
Sbjct: 330 DAYQANQVLKQMN----------DYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQ 379
Query: 187 TSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYN 246
++ +L EM R+ +PN VT++ I + E V M+E G P TY
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEA-GCKPDRVTYC 438
Query: 247 VRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKR 306
I K A + Q M +GG P+ ++S +I+ G+L A K+F +M +
Sbjct: 439 TLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQ 498
Query: 307 GYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDA 366
G P Y + + ++++A ++ ++ + G+ P+ T ++ L ++A
Sbjct: 499 GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEA 558
Query: 367 KELIKQVKEK 376
+ + ++++K
Sbjct: 559 EAVFTEMQQK 568
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 82/187 (43%), Gaps = 3/187 (1%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
+N ++ D N V+K + G+ + L + + + T++ + K+F
Sbjct: 323 QNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKR--QPGFKHDGHTYTTMVGNLGRAKQF 380
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
+ K+L M G P TYN I S + +EA + M G KP+ V++
Sbjct: 381 GAINKLLDEMVRD-GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 439
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
LI + G LD A ++ M+ G P++ Y + + L + G +A ++ E +D+G
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 343 WVPNFTT 349
PN T
Sbjct: 500 CTPNLVT 506
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 117/251 (46%), Gaps = 8/251 (3%)
Query: 125 MRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAES 184
+RD Q P+ + N L+ + A E ++ + +PD TY T+I A++
Sbjct: 391 VRDGCQ--PNTVTYNRLIHSYGRANYLNEAMNVFNQM-QEAGCKPDRVTYCTLIDIHAKA 447
Query: 185 GSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALST 244
G + M + P+ T+S I K+ M ++ G +P L T
Sbjct: 448 GFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQ-GCTPNLVT 506
Query: 245 YNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH--GYCWEGNLDEAKKVFAD 302
YN+ + K + A L + M + G +P+ V++S ++ G+C G L+EA+ VF +
Sbjct: 507 YNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLEEAEAVFTE 564
Query: 303 MKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSK 362
M+++ + P+ P Y L + G+ E A++ + + G PN T L++ + V+K
Sbjct: 565 MQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNK 624
Query: 363 TDDAKELIKQV 373
+A EL++ +
Sbjct: 625 IAEAYELLQNM 635
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 106/250 (42%), Gaps = 11/250 (4%)
Query: 127 DEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGS 186
D +Q +K +N DY + + + D TY T++ + +
Sbjct: 330 DAYQANQVLKQMN----------DYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQ 379
Query: 187 TSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYN 246
++ +L EM R+ +PN VT++ I + E V M+E G P TY
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEA-GCKPDRVTYC 438
Query: 247 VRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKR 306
I K A + Q M +GG P+ ++S +I+ G+L A K+F +M +
Sbjct: 439 TLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQ 498
Query: 307 GYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDA 366
G P Y + + ++++A ++ ++ + G+ P+ T ++ L ++A
Sbjct: 499 GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEA 558
Query: 367 KELIKQVKEK 376
+ + ++++K
Sbjct: 559 EAVFTEMQQK 568
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 82/187 (43%), Gaps = 3/187 (1%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
+N ++ D N V+K + G+ + L + + + T++ + K+F
Sbjct: 323 QNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKR--QPGFKHDGHTYTTMVGNLGRAKQF 380
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
+ K+L M G P TYN I S + +EA + M G KP+ V++
Sbjct: 381 GAINKLLDEMVRD-GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 439
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
LI + G LD A ++ M+ G P++ Y + + L + G +A ++ E +D+G
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 343 WVPNFTT 349
PN T
Sbjct: 500 CTPNLVT 506
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 117/251 (46%), Gaps = 8/251 (3%)
Query: 125 MRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAES 184
+RD Q P+ + N L+ + A E ++ + +PD TY T+I A++
Sbjct: 391 VRDGCQ--PNTVTYNRLIHSYGRANYLNEAMNVFNQM-QEAGCKPDRVTYCTLIDIHAKA 447
Query: 185 GSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALST 244
G + M + P+ T+S I K+ M ++ G +P L T
Sbjct: 448 GFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQ-GCTPNLVT 506
Query: 245 YNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH--GYCWEGNLDEAKKVFAD 302
YN+ + K + A L + M + G +P+ V++S ++ G+C G L+EA+ VF +
Sbjct: 507 YNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLEEAEAVFTE 564
Query: 303 MKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSK 362
M+++ + P+ P Y L + G+ E A++ + + G PN T L++ + V+K
Sbjct: 565 MQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNK 624
Query: 363 TDDAKELIKQV 373
+A EL++ +
Sbjct: 625 IAEAYELLQNM 635
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 106/250 (42%), Gaps = 11/250 (4%)
Query: 127 DEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGS 186
D +Q +K +N DY + + + D TY T++ + +
Sbjct: 330 DAYQANQVLKQMN----------DYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQ 379
Query: 187 TSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYN 246
++ +L EM R+ +PN VT++ I + E V M+E G P TY
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEA-GCKPDRVTYC 438
Query: 247 VRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKR 306
I K A + Q M +GG P+ ++S +I+ G+L A K+F +M +
Sbjct: 439 TLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQ 498
Query: 307 GYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDA 366
G P Y + + ++++A ++ ++ + G+ P+ T ++ L ++A
Sbjct: 499 GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEA 558
Query: 367 KELIKQVKEK 376
+ + ++++K
Sbjct: 559 EAVFTEMQQK 568
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 82/187 (43%), Gaps = 3/187 (1%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
+N ++ D N V+K + G+ + L + + + T++ + K+F
Sbjct: 323 QNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKR--QPGFKHDGHTYTTMVGNLGRAKQF 380
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
+ K+L M G P TYN I S + +EA + M G KP+ V++
Sbjct: 381 GAINKLLDEMVRD-GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 439
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
LI + G LD A ++ M+ G P++ Y + + L + G +A ++ E +D+G
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 343 WVPNFTT 349
PN T
Sbjct: 500 CTPNLVT 506
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 2/215 (0%)
Query: 163 KNYSIQPDVETYNTVIKSFA-ESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKK 221
K + +PDV TYN +++ E +++ +EM + + PN TF ++G Y + +
Sbjct: 154 KEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGR 213
Query: 222 FEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFS 281
+ K+ M + G+SP TY + I LC+ +A+ L M + G P+ V+ +
Sbjct: 214 TSDAQKMFDDMTGR-GISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHN 272
Query: 282 HLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDK 341
L+ G+C G + EA ++ +K G+ Y +L L + AFE+ + K
Sbjct: 273 ALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKK 332
Query: 342 GWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
P+ L+ GL K +DA +L+ + K
Sbjct: 333 NIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSK 367
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
K+ + D + +I ++A+ G M RP+ T++ + E+ F
Sbjct: 119 KSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVF 178
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
+ + K SP L T+ + + L K RTS+A+ + M G PN V+++
Sbjct: 179 FMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTI 238
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
LI G C G+ D+A+K+F +M+ G P+S + L C+ G AFE+ + G
Sbjct: 239 LISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDG 298
Query: 343 WVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+V L+ GL + A EL + +K
Sbjct: 299 FVLGLRGYSSLIDGLFRARRYTQAFELYANMLKK 332
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 124/306 (40%), Gaps = 39/306 (12%)
Query: 106 IVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALL----------------------- 142
I Y + M AV +F RM+ EF P V + N +L
Sbjct: 134 ISAYAKMGMAEKAVESFGRMK-EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKC 192
Query: 143 --------FAALIAKDYK-----EVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSS 189
F L+ YK + +++ D I P+ TY +I + GS
Sbjct: 193 NCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGR-GISPNRVTYTILISGLCQRGSADD 251
Query: 190 VYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRI 249
+ EM + P++V + ++GF + E ++L++ E K G L Y+ I
Sbjct: 252 ARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFE-KDGFVLGLRGYSSLI 310
Query: 250 LSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYK 309
L + +R ++A L M+ KP+ + ++ LI G G +++A K+ + M +G
Sbjct: 311 DGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGIS 370
Query: 310 PESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKEL 369
P++ CY + LC G E + E + P+ T L+ + +A+E+
Sbjct: 371 PDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEI 430
Query: 370 IKQVKE 375
++++
Sbjct: 431 FTEIEK 436
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 84/208 (40%), Gaps = 40/208 (19%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
I PD YN VIK+ G S+ EM P+A T + I E
Sbjct: 368 GISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREA 427
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISG-------------- 271
++ +E K G SP+++T+N I LCK EA+ LL M G
Sbjct: 428 EEIFTEIE-KSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGN 486
Query: 272 -------------------------GRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKR 306
G P+ VS++ LI+G+C G++D A K+ ++ +
Sbjct: 487 RSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLK 546
Query: 307 GYKPESPCYFTLAHFLCEGGDFESAFEI 334
G P+S Y TL + L G E AF++
Sbjct: 547 GLSPDSVTYNTLINGLHRVGREEEAFKL 574
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 92/206 (44%), Gaps = 1/206 (0%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
PD +N ++ F + G + +L +++ +S+ I+G + +++ + ++
Sbjct: 266 PDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFEL 325
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
M +K + P + Y + I L K + +A LL M S G P+ ++ +I C
Sbjct: 326 YANMLKK-NIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALC 384
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
G L+E + + +M + P++ + L +C G A EI E G P+
Sbjct: 385 GRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVA 444
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQVK 374
T L+ GL + +A+ L+ +++
Sbjct: 445 TFNALIDGLCKSGELKEARLLLHKME 470
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/285 (18%), Positives = 119/285 (41%), Gaps = 43/285 (15%)
Query: 136 KSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILS 195
+S + ++ + I K Y++++ + PD+ +YN +I F +G +L+
Sbjct: 487 RSFDTMVESGSILKAYRDLAHF-----ADTGSSPDIVSYNVLINGFCRAGDIDGALKLLN 541
Query: 196 EMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPA-------------- 241
+ + P++VT++ I G + + EE K+ ++ + SPA
Sbjct: 542 VLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF-YAKDDFRHSPAVYRSLMTWSCRKRK 600
Query: 242 -LSTYNVRILSLCKLK--------------RTSEAKALLQGMISGGRKPNWVS---FSHL 283
L +N+ + L K+ + E + L+ +I + + ++ ++
Sbjct: 601 VLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIW 660
Query: 284 IHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGW 343
+ G C G EA VF+ ++++ P L H LC+ ++A E+ ++D
Sbjct: 661 LIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDN-- 718
Query: 344 VPNFTTMKKLVTGLV-GVSKTDDAKELIKQVKEKFTESSDKWDEI 387
NF M ++ L+ + ++ + E++ Q+ + + D +
Sbjct: 719 --NFKLMPRVCNYLLSSLLESTEKMEIVSQLTNRMERAGYNVDSM 761
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 82/195 (42%), Gaps = 10/195 (5%)
Query: 152 KEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSN 211
+E I+ + K+ P V T+N +I +SG +L +M+ RP ++
Sbjct: 425 REAEEIFTEIEKS-GCSPSVATFNALIDGLCKSGELKEARLLLHKMEVG--RPASLFLRL 481
Query: 212 AIEGFYSEKKFEEVGKVLKMMEE-----KYGMSPALSTYNVRILSLCKLKRTSEAKALLQ 266
+ G S E G +LK + G SP + +YNV I C+ A LL
Sbjct: 482 SHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLN 541
Query: 267 GMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGG 326
+ G P+ V+++ LI+G G +EA K+F K ++ Y +L + C
Sbjct: 542 VLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRKR 599
Query: 327 DFESAFEITKESMDK 341
AF + + + K
Sbjct: 600 KVLVAFNLWMKYLKK 614
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 144/336 (42%), Gaps = 20/336 (5%)
Query: 32 TALHLLKSETNPERILDICRAASLTPDFHLDRIALSVAISKLKDGNHFSTIDQFLRDLPT 91
T + ++S TNPE + +C+ + F LDR +V D +H ++ R
Sbjct: 116 TGVSCVESSTNPEEVERVCKV--IDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHA 173
Query: 92 SRPDLR-------------NERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSL 138
+P R + R + + + + R V+ M + +T ++
Sbjct: 174 RKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTI 233
Query: 139 NALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMD 198
FAA AK+ K+ I+ + K Y + VET N ++ S + + ++
Sbjct: 234 AMKAFAA--AKERKKAVGIF-ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL- 289
Query: 199 RNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRT 258
+ PN +T++ + G+ + E ++ M + +G+ P + +NV + L + +
Sbjct: 290 KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID-HGLKPDIVAHNVMLEGLLRSMKK 348
Query: 259 SEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTL 318
S+A L M S G PN S++ +I +C + +++ A + F DM G +P++ Y L
Sbjct: 349 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 408
Query: 319 AHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
++ +E+ KE +KG P+ T L+
Sbjct: 409 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALI 444
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 115/254 (45%), Gaps = 9/254 (3%)
Query: 95 DLRNERF----LSQSIVLYGQARM--LPNAVTAFTRMRDEFQITPSVKSLNALLFAALIA 148
D ERF ++ +++L G R+ L A + M D + P + + N +L L +
Sbjct: 287 DKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDH-GLKPDIVAHNVMLEGLLRS 345
Query: 149 KDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVT 208
+ +++ K+ P+V +Y +I+ F + S + +M + ++P+A
Sbjct: 346 MKKSDAIKLF-HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAV 404
Query: 209 FSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGM 268
++ I GF ++KK + V ++LK M+EK G P TYN I + K + M
Sbjct: 405 YTCLITGFGTQKKLDTVYELLKEMQEK-GHPPDGKTYNALIKLMANQKMPEHGTRIYNKM 463
Query: 269 ISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDF 328
I +P+ +F+ ++ Y N + + V+ +M K+G P+ Y L L G
Sbjct: 464 IQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKS 523
Query: 329 ESAFEITKESMDKG 342
A +E +DKG
Sbjct: 524 REACRYLEEMLDKG 537
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 106/242 (43%), Gaps = 38/242 (15%)
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL 229
D TYN+++ A++ ++ S+L EM + TF+ A++ F + K+ ++ +
Sbjct: 193 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIF 251
Query: 230 KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW 289
++M +KY + T N + SL + K EA+ L + PN ++++ L++G+C
Sbjct: 252 ELM-KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK-LKERFTPNMMTYTVLLNGWCR 309
Query: 290 EGNLDEAKKVFADMKKRGYKPE------------------------------SPC----- 314
NL EA +++ DM G KP+ PC
Sbjct: 310 VRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRS 369
Query: 315 YFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVK 374
Y + C+ E+A E + +D G P+ L+TG K D EL+K+++
Sbjct: 370 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ 429
Query: 375 EK 376
EK
Sbjct: 430 EK 431
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 110/250 (44%), Gaps = 14/250 (5%)
Query: 93 RPDLRNERFLSQSIVLYGQARML--PNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKD 150
+PD+ ++ +++L G R + +A+ F M+ + P+V+S ++ +
Sbjct: 329 KPDI-----VAHNVMLEGLLRSMKKSDAIKLFHVMKSK-GPCPNVRSYT-IMIRDFCKQS 381
Query: 151 YKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFS 210
E + Y D + +QPD Y +I F +VY +L EM P+ T+
Sbjct: 382 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTY- 440
Query: 211 NAIEGFYSEKKFEEVGKVL--KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGM 268
NA+ + +K E G + KM++ + + P++ T+N+ + S + +A+ M
Sbjct: 441 NALIKLMANQKMPEHGTRIYNKMIQNE--IEPSIHTFNMIMKSYFVARNYEMGRAVWDEM 498
Query: 269 ISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDF 328
I G P+ S++ LI G EG EA + +M +G K Y A GG
Sbjct: 499 IKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQP 558
Query: 329 ESAFEITKES 338
E E+ + +
Sbjct: 559 EIFEELAQRA 568
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 106/241 (43%), Gaps = 5/241 (2%)
Query: 118 AVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTV 177
A F MR++F P+++ +LL+ E + + K ++PD+ + +
Sbjct: 221 ASKVFEDMREKF--PPNLRYFTSLLYGWCREGKLMEAKEVLVQM-KEAGLEPDIVVFTNL 277
Query: 178 IKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFY-SEKKFEEVGKVLKMMEEKY 236
+ +A +G + Y ++++M + PN ++ I+ +EK+ +E +V ME +Y
Sbjct: 278 LSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEME-RY 336
Query: 237 GMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEA 296
G + TY I CK + ++L M G P+ V++ ++ + + +E
Sbjct: 337 GCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEEC 396
Query: 297 KKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTG 356
++ MK+RG P+ Y + C+ G+ + A + E G P T ++ G
Sbjct: 397 LELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMING 456
Query: 357 L 357
Sbjct: 457 F 457
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 112/269 (41%), Gaps = 37/269 (13%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAAL-IAKDYKEVSRIYLDFPKNYSI 167
Y A + +A MR P+V L+ A K E R++++ + Y
Sbjct: 281 YAHAGKMADAYDLMNDMRKR-GFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMER-YGC 338
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
+ D+ TY +I F + G YS+L +M + V P+ VT+ + +++FEE +
Sbjct: 339 EADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLE 398
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
+++ M+ + G P L YNV I CKL EA L M + G P +F +I+G+
Sbjct: 399 LIEKMKRR-GCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGF 457
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
+G L EA F +M RG F+ P +
Sbjct: 458 TSQGFLIEACNHFKEMVSRGI-------FS--------------------------APQY 484
Query: 348 TTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
T+K L+ LV K + AK++ + K
Sbjct: 485 GTLKSLLNNLVRDDKLEMAKDVWSCISNK 513
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 111/241 (46%), Gaps = 9/241 (3%)
Query: 142 LFAALI-----AKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSE 196
LF L+ A K+ + + PK Y ++PD + ++ + ++GS + +
Sbjct: 169 LFVVLMRRFASANMVKKAVEVLDEMPK-YGLEPDEYVFGCLLDALCKNGSVKEASKVFED 227
Query: 197 MDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLK 256
M R PN F++ + G+ E K E +VL M+E G+ P + + +
Sbjct: 228 M-REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEA-GLEPDIVVFTNLLSGYAHAG 285
Query: 257 RTSEAKALLQGMISGGRKPNWVSFSHLIHGYC-WEGNLDEAKKVFADMKKRGYKPESPCY 315
+ ++A L+ M G +PN ++ LI C E +DEA +VF +M++ G + + Y
Sbjct: 286 KMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTY 345
Query: 316 FTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
L C+ G + + + + KG +P+ T +++ + ++ ELI+++K
Sbjct: 346 TALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKR 405
Query: 376 K 376
+
Sbjct: 406 R 406
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 4/159 (2%)
Query: 221 KFEEVGKVLKMMEEKYGMSPAL---STYNVRILSLCKLKRTSEAKALLQGMISGGRKPNW 277
K + G V ++EE +P L + V + +A +L M G +P+
Sbjct: 143 KMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDE 202
Query: 278 VSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKE 337
F L+ C G++ EA KVF DM+++ + P + +L + C G A E+ +
Sbjct: 203 YVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQ 261
Query: 338 SMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+ G P+ L++G K DA +L+ ++++
Sbjct: 262 MKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKR 300
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 139/346 (40%), Gaps = 46/346 (13%)
Query: 76 GNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSV 135
G + TI + +R+ S + LS+ + G+A+M+ A++ F + + + P+
Sbjct: 143 GEMYRTIQEVVRNTYVSV----SPAVLSELVKALGRAKMVSKALSVFYQAKGR-KCKPTS 197
Query: 136 KSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILS 195
+ N+++ + +++V +Y + PD TY+ +I S+ + G S +
Sbjct: 198 STYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFD 257
Query: 196 EMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE--KYGMSPALSTYNVRILSLC 253
EM N ++P ++ + ++ K E K L + EE + G SP + TY I L
Sbjct: 258 EMKDNCMQPTEKIYTTLLGIYFKVGKVE---KALDLFEEMKRAGCSPTVYTYTELIKGLG 314
Query: 254 KLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFAD----------- 302
K R EA + M+ G P+ V ++L++ G ++E VF++
Sbjct: 315 KAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVV 374
Query: 303 -------------------------MKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKE 337
MK P Y L C+ E A + +E
Sbjct: 375 SYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEE 434
Query: 338 SMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTESSDK 383
+KG+ P L+ L + + A EL K++KE F S +
Sbjct: 435 MDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSR 480
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 124/315 (39%), Gaps = 40/315 (12%)
Query: 85 FLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFA 144
LRD T PD+ FL+ + + G+ + F+ M ++ TP+V S N ++ A
Sbjct: 329 MLRDGLT--PDVV---FLNNLMNILGKVGRVEELTNVFSEM-GMWRCTPTVVSYNTVIKA 382
Query: 145 ALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRP 204
+K + + D K S+ P TY+ +I + ++ +L EMD P
Sbjct: 383 LFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPP 442
Query: 205 NAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYG--------------------------- 237
+ + I K++E ++ K ++E +G
Sbjct: 443 CPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLF 502
Query: 238 -------MSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWE 290
P + YN + + K +EA +LL+ M G + + S + +++G+
Sbjct: 503 NEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFART 562
Query: 291 GNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTM 350
G A ++F +K G KP+ Y TL G FE A + +E DKG+ + T
Sbjct: 563 GVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITY 622
Query: 351 KKLVTGLVGVSKTDD 365
++ + V D
Sbjct: 623 SSILDAVGNVDHEKD 637
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 146/348 (41%), Gaps = 11/348 (3%)
Query: 32 TALHLLKSETNPERILDICRAASLTPDFHLDRIALSVAISKL-KDGNHFSTIDQF--LRD 88
+ + +L E E++ ++ D D I S IS K G + S I F ++D
Sbjct: 202 SVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKD 261
Query: 89 LPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIA 148
+P E+ + + +Y + + A+ F M+ +P+V + L+ A
Sbjct: 262 -NCMQP---TEKIYTTLLGIYFKVGKVEKALDLFEEMK-RAGCSPTVYTYTELIKGLGKA 316
Query: 149 KDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVT 208
E Y D ++ + PDV N ++ + G + ++ SEM P V+
Sbjct: 317 GRVDEAYGFYKDMLRD-GLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVS 375
Query: 209 FSNAIEG-FYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQG 267
++ I+ F S+ EV M+ +SP+ TY++ I CK R +A LL+
Sbjct: 376 YNTVIKALFESKAHVSEVSSWFDKMKAD-SVSPSEFTYSILIDGYCKTNRVEKALLLLEE 434
Query: 268 MISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGD 327
M G P ++ LI+ + A ++F ++K+ S Y + + G
Sbjct: 435 MDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGK 494
Query: 328 FESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
A ++ E ++G P+ L++G+V ++A L+++++E
Sbjct: 495 LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEE 542
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 7/208 (3%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNS-VRPNAVTFSNAIEGFYSEKK 221
K + Q D TY T+I+ E+ +Y + E+ RN+ V + S ++ K
Sbjct: 118 KRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKM 177
Query: 222 FEEVGKVLKMMEEKYG--MSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRK-PNWV 278
V K L + + G P STYN IL L + + + + M + G P+ +
Sbjct: 178 ---VSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTI 234
Query: 279 SFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKES 338
++S LI Y G D A ++F +MK +P Y TL + G E A ++ +E
Sbjct: 235 TYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEM 294
Query: 339 MDKGWVPNFTTMKKLVTGLVGVSKTDDA 366
G P T +L+ GL + D+A
Sbjct: 295 KRAGCSPTVYTYTELIKGLGKAGRVDEA 322
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 112/260 (43%), Gaps = 8/260 (3%)
Query: 115 LPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETY 174
+ +A F MR F + +++ +LL+ E + + + +PD+ Y
Sbjct: 234 VKDAAKLFEDMRMRFPV--NLRYFTSLLYGWCRVGKMMEAKYVLVQMNEA-GFEPDIVDY 290
Query: 175 NTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE 234
++ +A +G + Y +L +M R PNA ++ I+ + EE KV ME
Sbjct: 291 TNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEME- 349
Query: 235 KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLD 294
+Y + TY + CK + + +L MI G P+ +++ H++ + + + +
Sbjct: 350 RYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFE 409
Query: 295 EAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
E ++ M++ Y P+ Y + C+ G+ + A + E + G P T ++
Sbjct: 410 ECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMI 469
Query: 355 TGLVG----VSKTDDAKELI 370
GL + +D KE++
Sbjct: 470 NGLASQGCLLEASDHFKEMV 489
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 90/198 (45%), Gaps = 4/198 (2%)
Query: 167 IQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVG 226
I+P E + +++ FA + +L EM + P+ F ++ ++
Sbjct: 181 IEP--ELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAA 238
Query: 227 KVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHG 286
K+ + M ++ ++ L + + C++ + EAK +L M G +P+ V +++L+ G
Sbjct: 239 KLFEDMRMRFPVN--LRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSG 296
Query: 287 YCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPN 346
Y G + +A + DM++RG++P + CY L LC+ E A ++ E +
Sbjct: 297 YANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEAD 356
Query: 347 FTTMKKLVTGLVGVSKTD 364
T LV+G K D
Sbjct: 357 VVTYTALVSGFCKWGKID 374
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 89/200 (44%), Gaps = 5/200 (2%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
Y A + +A MR P+ L+ A +E +++++ + Y +
Sbjct: 297 YANAGKMADAYDLLRDMRRR-GFEPNANCYTVLIQALCKVDRMEEAMKVFVEMER-YECE 354
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
DV TY ++ F + G Y +L +M + + P+ +T+ + + ++ FEE ++
Sbjct: 355 ADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLEL 414
Query: 229 L-KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
+ KM + +Y P + YNV I CKL EA L M G P +F +I+G
Sbjct: 415 MEKMRQIEY--HPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGL 472
Query: 288 CWEGNLDEAKKVFADMKKRG 307
+G L EA F +M RG
Sbjct: 473 ASQGCLLEASDHFKEMVTRG 492
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 93/217 (42%), Gaps = 2/217 (0%)
Query: 159 LDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYS 218
LD + +PD + ++ + + GS + +M R N F++ + G+
Sbjct: 206 LDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLYGWCR 264
Query: 219 EKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWV 278
K E VL M E G P + Y + + ++A LL+ M G +PN
Sbjct: 265 VGKMMEAKYVLVQMNEA-GFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNAN 323
Query: 279 SFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKES 338
++ LI C ++EA KVF +M++ + + Y L C+ G + + + +
Sbjct: 324 CYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDM 383
Query: 339 MDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
+ KG +P+ T ++ ++ EL++++++
Sbjct: 384 IKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQ 420
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 94/217 (43%), Gaps = 5/217 (2%)
Query: 165 YSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEE 224
Y +P ++ ++K E+G L ++ + V + AI+G K E
Sbjct: 538 YGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLI---KNEG 594
Query: 225 VGKVLKMMEE--KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
V + L++ + G P + Y+V I +LCK RT EA L M+S G KP +++
Sbjct: 595 VDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNS 654
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
+I G+C EG +D M + P+ Y +L H LC G A E K
Sbjct: 655 MIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKD 714
Query: 343 WVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTE 379
PN T L+ GL + +A ++++EK E
Sbjct: 715 CYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEME 751
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 109/273 (39%), Gaps = 21/273 (7%)
Query: 118 AVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTV 177
A F +MR + + + L+ KD + +YL+ K I PD +
Sbjct: 302 AFQLFEKMR-RMGMNADIALYDVLIGGLCKHKDLEMALSLYLEI-KRSGIPPDRGILGKL 359
Query: 178 IKSFAESGSTSSVYS-ILSEMD----------------RNSVRPNAVTFSNAIEGFYSEK 220
+ SF+E S + I+ ++D RN + A +F + G Y
Sbjct: 360 LCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESD 419
Query: 221 KFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSF 280
E+ K+LK + + P + ++ I L K + A LL ++ G P + +
Sbjct: 420 GVSEIVKLLK--DHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMY 477
Query: 281 SHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMD 340
+++I G C EG +E+ K+ +MK G +P + L E DF A ++ K+
Sbjct: 478 NNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRF 537
Query: 341 KGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
G+ P LV L + DA + + V
Sbjct: 538 YGFEPWIKHTTFLVKKLCENGRAVDACKYLDDV 570
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 94/204 (46%), Gaps = 4/204 (1%)
Query: 169 PDVETYNTVIKSFAESGSTSS--VYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVG 226
P+ TYN ++++ ++S S+S V + L EM + T + ++ + + K E
Sbjct: 175 PNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERAL 234
Query: 227 KVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHG 286
V + + + +ST + ++S CK + +A L++ + + N+ ++ LIHG
Sbjct: 235 SVFNEILSRGWLDEHIST--ILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHG 292
Query: 287 YCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPN 346
+ E +D+A ++F M++ G + Y L LC+ D E A + E G P+
Sbjct: 293 FVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPD 352
Query: 347 FTTMKKLVTGLVGVSKTDDAKELI 370
+ KL+ S+ E+I
Sbjct: 353 RGILGKLLCSFSEESELSRITEVI 376
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 143/336 (42%), Gaps = 20/336 (5%)
Query: 32 TALHLLKSETNPERILDICRAASLTPDFHLDRIALSVAISKLKDGNHFSTIDQFLRDLPT 91
T + ++S TNPE + +C+ + F LDR +V D +H ++ R
Sbjct: 117 TGVSCVESSTNPEEVERVCKV--IDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHA 174
Query: 92 SRPDLR-------------NERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSL 138
+P R R + + + + R V+ M + +T ++
Sbjct: 175 RKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTI 234
Query: 139 NALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMD 198
FAA AK+ K+ I+ + K Y + VET N ++ S + + ++
Sbjct: 235 AMKAFAA--AKERKKAVGIF-ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL- 290
Query: 199 RNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRT 258
+ PN +T++ + G+ + E ++ M + +G+ P + +NV + L + +
Sbjct: 291 KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID-HGLKPDIVAHNVMLEGLLRSMKK 349
Query: 259 SEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTL 318
S+A L M S G PN S++ +I +C + +++ A + F DM G +P++ Y L
Sbjct: 350 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 409
Query: 319 AHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
++ +E+ KE +KG P+ T L+
Sbjct: 410 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALI 445
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 115/254 (45%), Gaps = 9/254 (3%)
Query: 95 DLRNERF----LSQSIVLYGQARM--LPNAVTAFTRMRDEFQITPSVKSLNALLFAALIA 148
D ERF ++ +++L G R+ L A + M D + P + + N +L L +
Sbjct: 288 DKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDH-GLKPDIVAHNVMLEGLLRS 346
Query: 149 KDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVT 208
+ +++ K+ P+V +Y +I+ F + S + +M + ++P+A
Sbjct: 347 MKKSDAIKLF-HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAV 405
Query: 209 FSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGM 268
++ I GF ++KK + V ++LK M+EK G P TYN I + K + M
Sbjct: 406 YTCLITGFGTQKKLDTVYELLKEMQEK-GHPPDGKTYNALIKLMANQKMPEHGTRIYNKM 464
Query: 269 ISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDF 328
I +P+ +F+ ++ Y N + + V+ +M K+G P+ Y L L G
Sbjct: 465 IQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKS 524
Query: 329 ESAFEITKESMDKG 342
A +E +DKG
Sbjct: 525 REACRYLEEMLDKG 538
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 110/250 (44%), Gaps = 14/250 (5%)
Query: 93 RPDLRNERFLSQSIVLYGQARML--PNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKD 150
+PD+ ++ +++L G R + +A+ F M+ + P+V+S ++ +
Sbjct: 330 KPDI-----VAHNVMLEGLLRSMKKSDAIKLFHVMKSK-GPCPNVRSYT-IMIRDFCKQS 382
Query: 151 YKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFS 210
E + Y D + +QPD Y +I F +VY +L EM P+ T+
Sbjct: 383 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTY- 441
Query: 211 NAIEGFYSEKKFEEVGKVL--KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGM 268
NA+ + +K E G + KM++ + + P++ T+N+ + S + +A+ M
Sbjct: 442 NALIKLMANQKMPEHGTRIYNKMIQNE--IEPSIHTFNMIMKSYFVARNYEMGRAVWDEM 499
Query: 269 ISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDF 328
I G P+ S++ LI G EG EA + +M +G K Y A GG
Sbjct: 500 IKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQP 559
Query: 329 ESAFEITKES 338
E E+ + +
Sbjct: 560 EIFEELAQRA 569
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 99/230 (43%), Gaps = 6/230 (2%)
Query: 124 RMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAE 183
R F P + S N+L K EV +Y+ P+V TY+T I +F +
Sbjct: 118 RASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLK-CCSPNVVTYSTWIDTFCK 175
Query: 184 SGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALS 243
SG M R+++ PN VTF+ I+G+ E + K M + MS +
Sbjct: 176 SGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMR-RVRMSLNVV 234
Query: 244 TYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADM 303
TY I CK A+ + M+ +PN + ++ +I G+ G+ D A K A M
Sbjct: 235 TYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKM 294
Query: 304 KKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPN---FTTM 350
+G + + Y + LC G + A EI ++ VP+ FTTM
Sbjct: 295 LNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTM 344
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 123/268 (45%), Gaps = 8/268 (2%)
Query: 110 GQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIY--LDFPKNYSI 167
GQ + + V + R F P V S N+L+ D + S + L +
Sbjct: 70 GQVKFAEDIVHSMPR----FGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFIC 125
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
+PD+ ++N++ F++ V+ + M + PN VT+S I+ F + + K
Sbjct: 126 KPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK-CCSPNVVTYSTWIDTFCKSGELQLALK 184
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
M+ +SP + T+ I CK A +L + M N V+++ LI G+
Sbjct: 185 SFHSMKRD-ALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGF 243
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
C +G + A+++++ M + +P S Y T+ + GD ++A + + +++G +
Sbjct: 244 CKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDI 303
Query: 348 TTMKKLVTGLVGVSKTDDAKELIKQVKE 375
T +++GL G K +A E+++ +++
Sbjct: 304 TAYGVIISGLCGNGKLKEATEIVEDMEK 331
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 94/236 (39%), Gaps = 3/236 (1%)
Query: 146 LIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPN 205
LI + +S +L + + P ++N+V+ + G I+ M R P+
Sbjct: 31 LINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPD 90
Query: 206 AVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGM--SPALSTYNVRILSLCKLKRTSEAKA 263
+++++ I+G VL+ + +G P + ++N K+K E
Sbjct: 91 VISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFV 150
Query: 264 LLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLC 323
+ G++ PN V++S I +C G L A K F MK+ P + L C
Sbjct: 151 YM-GVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYC 209
Query: 324 EGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTE 379
+ GD E A + KE N T L+ G + A+E+ ++ E E
Sbjct: 210 KAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVE 265
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 124/301 (41%), Gaps = 40/301 (13%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
Y +A L AV+ + MR +++ +V + AL+ + + +Y ++ ++
Sbjct: 208 YCKAGDLEVAVSLYKEMR-RVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVED-RVE 265
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P+ Y T+I F + G + + L++M +R + + I G K +E ++
Sbjct: 266 PNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEI 325
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHG-- 286
++ ME K + P + + + + K R A + +I G +P+ V+ S +I G
Sbjct: 326 VEDME-KSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIA 384
Query: 287 ----------------------------YCWEGNLDEAKKVFADMKKRGYKPESPCYFTL 318
C EG+ E +++F+ + + G P+ Y +
Sbjct: 385 KNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSW 444
Query: 319 AHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFT 378
LC+ G+ AF++ + +G + + L+ GL +K L+ + ++ F
Sbjct: 445 IAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLA-------SKGLMVEARQVFD 497
Query: 379 E 379
E
Sbjct: 498 E 498
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 7/203 (3%)
Query: 152 KEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSN 211
KE + I D K+ + PD+ + T++ ++ +SG + ++ ++ P+ V S
Sbjct: 320 KEATEIVEDMEKS-DLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALST 378
Query: 212 AIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISG 271
I+G + E ++ EK Y V I +LCK E + L +
Sbjct: 379 MIDGIAKNGQLHEA--IVYFCIEK----ANDVMYTVLIDALCKEGDFIEVERLFSKISEA 432
Query: 272 GRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESA 331
G P+ ++ I G C +GNL +A K+ M + G + Y TL + L G A
Sbjct: 433 GLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEA 492
Query: 332 FEITKESMDKGWVPNFTTMKKLV 354
++ E ++ G P+ L+
Sbjct: 493 RQVFDEMLNSGISPDSAVFDLLI 515
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 10/179 (5%)
Query: 168 QPDVETYNTVIKSFAESGST--SSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
+PDV +T+I A++G + VY + + N V ++ I+ E F EV
Sbjct: 370 EPDVVALSTMIDGIAKNGQLHEAIVYFCIE-------KANDVMYTVLIDALCKEGDFIEV 422
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
++ + E G+ P Y I LCK +A L M+ G + ++++ LI+
Sbjct: 423 ERLFSKISEA-GLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIY 481
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWV 344
G +G + EA++VF +M G P+S + L + G+ +A ++ + +G V
Sbjct: 482 GLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLV 540
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 119/271 (43%), Gaps = 3/271 (1%)
Query: 106 IVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNY 165
I LY + + A+ M++E + ++K+ + ++ + KD+ ++ D K
Sbjct: 491 INLYTKVGKISKALEVSRVMKEE-GVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKE- 548
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
++PDV YN +I +F G+ + EM + RP TF I G+
Sbjct: 549 GMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRS 608
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
+V MM + G P + T+N I L + ++ +A +L M G N +++ ++
Sbjct: 609 LEVFDMMR-RCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQ 667
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
GY G+ +A + F ++ G + Y L C+ G +SA +TKE +
Sbjct: 668 GYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPR 727
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
N L+ G +A +LI+Q+K++
Sbjct: 728 NSFVYNILIDGWARRGDVWEAADLIQQMKKE 758
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 110/242 (45%), Gaps = 5/242 (2%)
Query: 136 KSLNALLFAALIAKDYK----EVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVY 191
K+LNA ++ +I + E + + + I + Y+T++ +
Sbjct: 410 KTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGL 469
Query: 192 SILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILS 251
+ + P VT+ I + K + +V ++M+E+ G+ L TY++ I
Sbjct: 470 VVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEE-GVKHNLKTYSMMING 528
Query: 252 LCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPE 311
KLK + A A+ + M+ G KP+ + ++++I +C GN+D A + +M+K ++P
Sbjct: 529 FVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPT 588
Query: 312 SPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIK 371
+ + + H + GD + E+ G VP T L+ GLV + + A E++
Sbjct: 589 TRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILD 648
Query: 372 QV 373
++
Sbjct: 649 EM 650
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 87/212 (41%), Gaps = 1/212 (0%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
K P V TY +I + + G S + M V+ N T+S I GF K +
Sbjct: 476 KECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDW 535
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
V + M K GM P + YN I + C + A ++ M +P +F
Sbjct: 536 ANAFAVFEDMV-KEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMP 594
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
+IHGY G++ + +VF M++ G P + L + L E E A EI E G
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654
Query: 343 WVPNFTTMKKLVTGLVGVSKTDDAKELIKQVK 374
N T K++ G V T A E +++
Sbjct: 655 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQ 686
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 127/321 (39%), Gaps = 43/321 (13%)
Query: 72 KLKD-GNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQ 130
KLKD N F+ + +++ +PD ++LY N ++AF M + +
Sbjct: 531 KLKDWANAFAVFEDMVKE--GMKPD----------VILYN------NIISAFCGMGNMDR 572
Query: 131 ITPSVKSLNAL-------LFAALI-----AKDYKEVSRIYLDFPKNYSIQPDVETYNTVI 178
+VK + L F +I + D + ++ D + P V T+N +I
Sbjct: 573 AIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVF-DMMRRCGCVPTVHTFNGLI 631
Query: 179 KSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMME----- 233
E IL EM V N T++ ++G+ S VG K E
Sbjct: 632 NGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYAS------VGDTGKAFEYFTRL 685
Query: 234 EKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNL 293
+ G+ + TY + + CK R A A+ + M + N ++ LI G+ G++
Sbjct: 686 QNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDV 745
Query: 294 DEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKL 353
EA + MKK G KP+ Y + + GD A + +E G PN T L
Sbjct: 746 WEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTL 805
Query: 354 VTGLVGVSKTDDAKELIKQVK 374
+ G S + A +++K
Sbjct: 806 IKGWARASLPEKALSCYEEMK 826
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 115/270 (42%), Gaps = 3/270 (1%)
Query: 106 IVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNY 165
+ YG+ + A F RMR ITP+ + +L+ A + +D E K
Sbjct: 316 VKFYGRRGDMHRARETFERMRAR-GITPTSRIYTSLIHAYAVGRDMDEALSCVRKM-KEE 373
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
I+ + TY+ ++ F+++G + E R NA + I E
Sbjct: 374 GIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERA 433
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
+++ MEE+ G+ ++ Y+ + + + + + + G P V++ LI+
Sbjct: 434 EALVREMEEE-GIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLIN 492
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
Y G + +A +V MK+ G K Y + + + D+ +AF + ++ + +G P
Sbjct: 493 LYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKP 552
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
+ +++ G+ D A + +K++++
Sbjct: 553 DVILYNNIISAFCGMGNMDRAIQTVKEMQK 582
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 7/198 (3%)
Query: 158 YLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFY 217
Y +N + D+ TY ++K+ +SG S ++ EM ++ N+ ++ I+G+
Sbjct: 681 YFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWA 740
Query: 218 SEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNW 277
E +++ M+ K G+ P + TY I + K + A ++ M + G KPN
Sbjct: 741 RRGDVWEAADLIQQMK-KEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNI 799
Query: 278 VSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFL------CEGGDFESA 331
+++ LI G+ ++A + +MK G KP+ Y L L E +
Sbjct: 800 KTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGV 859
Query: 332 FEITKESMDKGWVPNFTT 349
I KE ++ G + + T
Sbjct: 860 MTICKEMVEAGLIVDMGT 877
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 111/285 (38%), Gaps = 14/285 (4%)
Query: 84 QFLRDLPTSRPDLRNERFLSQSIVLYGQARM--LPNAVTAFTRMRDEFQITPSVKSLNAL 141
Q LR PT+R F+ +++G A+ + ++ F MR P+V + N L
Sbjct: 581 QKLRHRPTTRT------FMP---IIHGYAKSGDMRRSLEVFDMMR-RCGCVPTVHTFNGL 630
Query: 142 LFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNS 201
+ L+ K E + LD + + TY +++ +A G T + + +
Sbjct: 631 I-NGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEG 689
Query: 202 VRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEA 261
+ + T+ ++ + + V K M + + YN+ I + EA
Sbjct: 690 LDVDIFTYEALLKACCKSGRMQSALAVTKEMSAR-NIPRNSFVYNILIDGWARRGDVWEA 748
Query: 262 KALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHF 321
L+Q M G KP+ +++ I G+++ A + +M+ G KP Y TL
Sbjct: 749 ADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKG 808
Query: 322 LCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDA 366
E A +E G P+ L+T L+ + +A
Sbjct: 809 WARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEA 853
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 145/324 (44%), Gaps = 11/324 (3%)
Query: 55 LTPDFHLDRIALSVAISKLKDGNHFS-TIDQFLRDLPTS-RPDLRNERFLSQSIVLYGQA 112
+T L+ + + + L G I F R + T RP+ L +V GQ
Sbjct: 297 ITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQL 356
Query: 113 RMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVE 172
L V R + + V++L+ L + E R++ D ++ ++ + +
Sbjct: 357 VRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVS-------EAHRLFCDM-WSFPVKGERD 408
Query: 173 TYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMM 232
+Y ++++S +G T +LS++ V + + ++ K+ + + + M
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKM 468
Query: 233 EEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGN 292
+ K G SP + TYN+ I S ++ EA + + + KP+ +S++ LI+ G+
Sbjct: 469 K-KDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGD 527
Query: 293 LDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKK 352
+DEA F +M+++G P+ Y TL + E A+ + +E + KG PN T
Sbjct: 528 VDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNI 587
Query: 353 LVTGLVGVSKTDDAKELIKQVKEK 376
L+ L +T +A +L ++K++
Sbjct: 588 LLDCLEKNGRTAEAVDLYSKMKQQ 611
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 91/179 (50%), Gaps = 5/179 (2%)
Query: 142 LFAALIAKDYKEVSRIYLDFPK--NYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDR 199
+F+AL K++S I+ F K PD+ TYN +I SF G +I E++R
Sbjct: 448 VFSAL--GKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELER 505
Query: 200 NSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTS 259
+ +P+ +++++ I +E K M+EK G++P + TY+ + K +R
Sbjct: 506 SDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEK-GLNPDVVTYSTLMECFGKTERVE 564
Query: 260 EAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTL 318
A +L + M+ G +PN V+++ L+ G EA +++ MK++G P+S Y L
Sbjct: 565 MAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 117/265 (44%), Gaps = 14/265 (5%)
Query: 84 QFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEF---QITPSVKSLNA 140
+F + +P+ P +N+ FL I+L LP+ + D + ++ ++N
Sbjct: 117 EFFKLVPSLCPYSQNDPFLYNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNI 176
Query: 141 LLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRN 200
L+ +D + R+ K + ++ + TY +++++ S S + + E+ R
Sbjct: 177 LIGFFGNTEDLQMCLRLV----KKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRG 232
Query: 201 SVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSE 260
+ + ++ ++ K E+ +V + M++++ TY + I ++ ++ + E
Sbjct: 233 GHKLDIFAYNMLLDAL---AKDEKACQVFEDMKKRHCRRDEY-TYTIMIRTMGRIGKCDE 288
Query: 261 AKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAH 320
A L MI+ G N V ++ L+ +D+A +VF+ M + G +P Y L +
Sbjct: 289 AVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLN 348
Query: 321 FLCEGGD---FESAFEITKESMDKG 342
L G + EI+K M +G
Sbjct: 349 LLVAEGQLVRLDGVVEISKRYMTQG 373
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 94/199 (47%), Gaps = 2/199 (1%)
Query: 148 AKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAV 207
AK + E++++ LD +P+ TYN +I S+ + ++ ++M P+ V
Sbjct: 372 AKQFGEINKL-LDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRV 430
Query: 208 TFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQG 267
T+ I+ +++ F ++ + ++ G+SP TY+V I L K A L
Sbjct: 431 TYCTLID-IHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCE 489
Query: 268 MISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGD 327
M+ G PN V+F+ +I + N + A K++ DM+ G++P+ Y + L G
Sbjct: 490 MVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGF 549
Query: 328 FESAFEITKESMDKGWVPN 346
E A + E K WVP+
Sbjct: 550 LEEAEGVFAEMQRKNWVPD 568
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 127/319 (39%), Gaps = 43/319 (13%)
Query: 57 PDFHLDRIALSVAISKLKDGNHFSTIDQFLRDL--PTSRPDLRNERFLSQSIVLYGQARM 114
P F D + + L F I++ L ++ +P+ L S YG+A
Sbjct: 353 PGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHS---YGRANY 409
Query: 115 LPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETY 174
L A+ F +M+ E P + L+ A + +++ + + PD TY
Sbjct: 410 LKEAMNVFNQMQ-EAGCEPDRVTYCTLIDIHAKA-GFLDIAMDMYQRMQEAGLSPDTFTY 467
Query: 175 NTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE 234
+ +I ++G + + + EM PN VTF+ I + +E K+ + M+
Sbjct: 468 SVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQN 527
Query: 235 KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLD 294
G P TY++ + L G+C G L+
Sbjct: 528 A-GFQPDKVTYSIVMEVL---------------------------------GHC--GFLE 551
Query: 295 EAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
EA+ VFA+M+++ + P+ P Y L + G+ + A++ + + G PN T L+
Sbjct: 552 EAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLL 611
Query: 355 TGLVGVSKTDDAKELIKQV 373
+ + V + +A L++ +
Sbjct: 612 STFLRVHRMSEAYNLLQSM 630
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 85/179 (47%), Gaps = 3/179 (1%)
Query: 106 IVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNY 165
I G+A LP A F M + TP++ + N ++ A++Y+ ++Y D +N
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQ-GCTPNLVTFNIMIALHAKARNYETALKLYRDM-QNA 528
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
QPD TY+ V++ G + +EM R + P+ + ++ + ++
Sbjct: 529 GFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKA 588
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLI 284
+ + M + G+ P + T N + + ++ R SEA LLQ M++ G P+ +++ L+
Sbjct: 589 WQWYQAMLQA-GLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 125/288 (43%), Gaps = 22/288 (7%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
+G + + + F M+ +I+ S S + + F AK+ + IY P + S +
Sbjct: 108 FGISGRWQDLIQLFEWMQQHGKISVSTYS-SCIKFVG--AKNVSKALEIYQSIP-DESTK 163
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYS-----EKKFE 223
+V N+++ ++G S + +M R+ ++P+ VT++ + G K E
Sbjct: 164 INVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIE 223
Query: 224 EVGKV----LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVS 279
+G++ ++M YG A+ N R+ EA+ +Q M G PN
Sbjct: 224 LIGELPHNGIQMDSVMYGTVLAICASN---------GRSEEAENFIQQMKVEGHSPNIYH 274
Query: 280 FSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESM 339
+S L++ Y W+G+ +A ++ +MK G P TL +GG F+ + E+ E
Sbjct: 275 YSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELE 334
Query: 340 DKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTESSDKWDEI 387
G+ N L+ GL K ++A+ + +K K S + I
Sbjct: 335 SAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSI 382
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 100/225 (44%), Gaps = 4/225 (1%)
Query: 115 LPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKD-YKEVSRIYLDFPKNYSIQPDVET 173
L + + F +M+ + + P V + N LL + K+ Y + + + P N IQ D
Sbjct: 182 LDSCIKLFDQMKRD-GLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHN-GIQMDSVM 239
Query: 174 YNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMME 233
Y TV+ A +G + + + +M PN +S+ + + + +++ +++ M+
Sbjct: 240 YGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMK 299
Query: 234 EKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNL 293
G+ P + K ++ LL + S G N + + L+ G G L
Sbjct: 300 S-IGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKL 358
Query: 294 DEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKES 338
+EA+ +F DMK +G + + + LC F+ A E++++S
Sbjct: 359 EEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDS 403
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 92/211 (43%), Gaps = 2/211 (0%)
Query: 132 TPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVY 191
+P++ ++LL + DYK+ + + K+ + P+ T++K + + G
Sbjct: 269 SPNIYHYSSLLNSYSWKGDYKKADELMTEM-KSIGLVPNKVMMTTLLKVYIKGGLFDRSR 327
Query: 192 SILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILS 251
+LSE++ N + + ++G K EE + M+ K G+ ++ I +
Sbjct: 328 ELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGK-GVRSDGYANSIMISA 386
Query: 252 LCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPE 311
LC+ KR EAK L + + K + V + ++ YC G ++ ++ M ++ P+
Sbjct: 387 LCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPD 446
Query: 312 SPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
+ L + + A++ T + KG
Sbjct: 447 YNTFHILIKYFIKEKLHLLAYQTTLDMHSKG 477
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%)
Query: 164 NYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFE 223
N S P Y + KS A S++ IL +M S+ + T IE + +
Sbjct: 104 NPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVD 163
Query: 224 EVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHL 283
+ ++ + + G + YN + +LC +K A AL++ MI G KP+ +++ L
Sbjct: 164 QAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAIL 223
Query: 284 IHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGW 343
++G+C G + EA++ +M +RG+ P + L L G ESA E+ + G+
Sbjct: 224 VNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGF 283
Query: 344 VPNFTTMKKLVTGL 357
VP+ T L+ +
Sbjct: 284 VPDIQTFNILIEAI 297
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 105/296 (35%), Gaps = 37/296 (12%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
YG+ + AV F + +V N+LL A K + + + ++
Sbjct: 156 YGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRK-GLK 214
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
PD TY ++ + +G L EM R P A IEG + E ++
Sbjct: 215 PDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEM 274
Query: 229 LKMMEEKYGMSPALSTYNVRI---------------------LSLC-------------- 253
+ M K G P + T+N+ I L LC
Sbjct: 275 VSKMT-KGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVS 333
Query: 254 KLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESP 313
K+ + EA LL + G KP ++ +I G C G D+A F+DMK + + P P
Sbjct: 334 KIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRP 393
Query: 314 CYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKEL 369
Y L GG F A E + G VP + GL K D A +
Sbjct: 394 VYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRI 449
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 96/249 (38%), Gaps = 36/249 (14%)
Query: 162 PKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKK 221
PK Q V+ YN+++ + + Y+++ M R ++P+ T++ + G+ S K
Sbjct: 173 PKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGK 232
Query: 222 FEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFS 281
+E + L M + G +P ++ I L AK ++ M GG P+ +F+
Sbjct: 233 MKEAQEFLDEMSRR-GFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFN 291
Query: 282 HLIHG--------YCWE---------------------------GNLDEAKKVFADMKKR 306
LI +C E G +DEA ++ + +
Sbjct: 292 ILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVED 351
Query: 307 GYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDA 366
G+KP Y + +C G F+ AF + K PN L+T K DA
Sbjct: 352 GHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDA 411
Query: 367 KELIKQVKE 375
+ ++ E
Sbjct: 412 ANYLVEMTE 420
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 112/249 (44%), Gaps = 9/249 (3%)
Query: 110 GQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYK---EVSRIYLDFPKNYS 166
GQ RM A+ F+ M++ P NAL+ A L +D E R YLD K
Sbjct: 147 GQTRM---AMWLFSEMKNS-GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIE 202
Query: 167 -IQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
QP+V TYN ++++FA+SG V ++ ++D + V P+ TF+ ++ + +E+
Sbjct: 203 RCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEM 262
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
VL M P + T+NV I S K + + + + ++ KP +F+ +I
Sbjct: 263 EAVLTRMRSN-ECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMII 321
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
Y +D+A+ VF M Y P Y + G A EI +E + V
Sbjct: 322 NYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVL 381
Query: 346 NFTTMKKLV 354
+T+ ++
Sbjct: 382 KASTLNAML 390
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 114/271 (42%), Gaps = 37/271 (13%)
Query: 111 QARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPD 170
+A+ L +M+ + P+V + N LL A + +V+ ++ D + + PD
Sbjct: 184 KAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMS-PVSPD 242
Query: 171 VETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLK 230
V T+N V+ ++ ++G + ++L+ M N +P+ +TF+ I+ + +++FE++ + K
Sbjct: 243 VYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFK 302
Query: 231 -MMEEK--------------YGMS-------------------PALSTYNVRILSLCKLK 256
+M K YG + P+ TY I+
Sbjct: 303 SLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCG 362
Query: 257 RTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYF 316
S A+ + + + R + + ++ YC G EA K+F + P++ Y
Sbjct: 363 SVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYK 422
Query: 317 TLAHFLCEGGDFESAFEITKESMDK-GWVPN 346
L + D + +I + M+K G VPN
Sbjct: 423 FLYKAYTK-ADMKEQVQILMKKMEKDGIVPN 452
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 87/211 (41%), Gaps = 4/211 (1%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEG-FYSEKKFEEVGK 227
PD Y+ +I + G T + SEM + RP+A ++ I ++ K + + K
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 228 VLKMMEEKYGM---SPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLI 284
V +++ G+ P + TYN+ + + + + + AL + + P+ +F+ ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 285 HGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWV 344
Y G + E + V M+ KP+ + L + +FE + K M
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 345 PNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
P T ++ D A+ + K++ +
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMND 341
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 1/207 (0%)
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL 229
+V YN+++ + + VY IL+EM V PN T NA F+ + F + L
Sbjct: 356 EVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTM-NAALCFFCKAGFVDEALEL 414
Query: 230 KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW 289
+ G +P +YN I +LC + +A +L+G I G +FS L + CW
Sbjct: 415 YRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCW 474
Query: 290 EGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTT 349
+G D A+++ +R P+ + LC+ G E A I + G +F
Sbjct: 475 KGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKM 534
Query: 350 MKKLVTGLVGVSKTDDAKELIKQVKEK 376
L+ G + + + D A +LI +++EK
Sbjct: 535 FTSLIYGSITLMRGDIAAKLIIRMQEK 561
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 105/232 (45%), Gaps = 9/232 (3%)
Query: 110 GQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYK---EVSRIYLDFPKNYS 166
GQ RM A+ F+ M++ P NAL+ A L +D E R YLD K
Sbjct: 147 GQTRM---AMWLFSEMKNS-GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIE 202
Query: 167 -IQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
QP+V TYN ++++FA+SG V ++ ++D + V P+ TF+ ++ + +E+
Sbjct: 203 RCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEM 262
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
VL M P + T+NV I S K + + + + ++ KP +F+ +I
Sbjct: 263 EAVLTRMRSN-ECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMII 321
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKE 337
Y +D+A+ VF M Y P Y + G A EI +E
Sbjct: 322 NYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEE 373
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 114/271 (42%), Gaps = 37/271 (13%)
Query: 111 QARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPD 170
+A+ L +M+ + P+V + N LL A + +V+ ++ D + + PD
Sbjct: 184 KAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMS-PVSPD 242
Query: 171 VETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLK 230
V T+N V+ ++ ++G + ++L+ M N +P+ +TF+ I+ + +++FE++ + K
Sbjct: 243 VYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFK 302
Query: 231 -MMEEK--------------YGMS-------------------PALSTYNVRILSLCKLK 256
+M K YG + P+ TY I+
Sbjct: 303 SLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCG 362
Query: 257 RTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYF 316
S A+ + + + R + + ++ YC G EA K+F + P++ Y
Sbjct: 363 SVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYK 422
Query: 317 TLAHFLCEGGDFESAFEITKESMDK-GWVPN 346
L + D + +I + M+K G VPN
Sbjct: 423 FLYKAYTK-ADMKEQVQILMKKMEKDGIVPN 452
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 87/211 (41%), Gaps = 4/211 (1%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEG-FYSEKKFEEVGK 227
PD Y+ +I + G T + SEM + RP+A ++ I ++ K + + K
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 228 VLKMMEEKYGM---SPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLI 284
V +++ G+ P + TYN+ + + + + + AL + + P+ +F+ ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 285 HGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWV 344
Y G + E + V M+ KP+ + L + +FE + K M
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 345 PNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
P T ++ D A+ + K++ +
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMND 341
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 152/330 (46%), Gaps = 17/330 (5%)
Query: 60 HLDRIALSVAISKLKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAV 119
+D + L A KL + N + L + ++ P++ + L +S YG+ NA
Sbjct: 146 EIDFLMLITAYGKLGNFNGAERVLSVLSKMGST-PNVISYTALMES---YGRGGKCNNAE 201
Query: 120 TAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIY---LDFPKNYSIQPDVETYNT 176
F RM+ PS + +L + +KE ++ LD K ++PD + Y+
Sbjct: 202 AIFRRMQSSGP-EPSAITYQIILKTFVEGDKFKEAEEVFETLLD-EKKSPLKPDQKMYHM 259
Query: 177 VIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKY 236
+I + ++G+ + S M V + VT+ N++ F E ++EV K+ M+ +
Sbjct: 260 MIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTY-NSLMSF--ETSYKEVSKIYDQMQ-RS 315
Query: 237 GMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEA 296
+ P + +Y + I + + +R EA ++ + M+ G +P +++ L+ + G +++A
Sbjct: 316 DIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQA 375
Query: 297 KKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTG 356
K VF M++ P+ Y T+ D E A + K G+ PN T L+ G
Sbjct: 376 KTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKG 435
Query: 357 LVGVSKTDDAKELIKQVKEKFTESSDKWDE 386
+K +D ++++ +V EK S K ++
Sbjct: 436 Y---AKANDVEKMM-EVYEKMRLSGIKANQ 461
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 128/309 (41%), Gaps = 10/309 (3%)
Query: 64 IALSVAISKLKDGNHFSTIDQFLRDLPTSR--PDLRNERFLSQSIVLYGQARMLPNAVTA 121
I + + +G+ F ++ L + P +++ I +Y +A A
Sbjct: 217 ITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKV 276
Query: 122 FTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSF 181
F+ M + + S + N+L+ YKEVS+IY D + IQPDV +Y +IK++
Sbjct: 277 FSSMVGK-GVPQSTVTYNSLMS---FETSYKEVSKIY-DQMQRSDIQPDVVSYALLIKAY 331
Query: 182 AESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPA 241
+ S+ EM VRP ++ ++ F E+ V K M + P
Sbjct: 332 GRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR-IFPD 390
Query: 242 LSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFA 301
L +Y + + A+ + + G +PN V++ LI GY ++++ +V+
Sbjct: 391 LWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYE 450
Query: 302 DMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVS 361
M+ G K T+ +F SA KE M+ VP K ++ L
Sbjct: 451 KMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKE-MESCGVPPDQKAKNVLLSLASTQ 509
Query: 362 -KTDDAKEL 369
+ ++AKEL
Sbjct: 510 DELEEAKEL 518
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 140/327 (42%), Gaps = 16/327 (4%)
Query: 32 TALHLLKSETNPERILDICRAASLTPDFHLDRIALSVAISKLKDGNHFSTIDQFLRDLPT 91
TA L + ER+L + TP+ I+ + + G + + R + +
Sbjct: 154 TAYGKLGNFNGAERVLSVLSKMGSTPNV----ISYTALMESYGRGGKCNNAEAIFRRMQS 209
Query: 92 SRPDLRNERFLSQSIVL--YGQARMLPNAVTAFTRMRDEFQ--ITPSVKSLNALLFAALI 147
S P+ ++ I+L + + A F + DE + + P K + +++
Sbjct: 210 SGPE---PSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 266
Query: 148 AKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAV 207
A +Y++ +++ Q V TYN+++ SF S V I +M R+ ++P+ V
Sbjct: 267 AGNYEKARKVFSSMVGKGVPQSTV-TYNSLM-SF--ETSYKEVSKIYDQMQRSDIQPDVV 322
Query: 208 TFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQG 267
+++ I+ + ++ EE V + M + G+ P YN+ + + +AK + +
Sbjct: 323 SYALLIKAYGRARREEEALSVFEEMLDA-GVRPTHKAYNILLDAFAISGMVEQAKTVFKS 381
Query: 268 MISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGD 327
M P+ S++ ++ Y +++ A+K F +K G++P Y TL + D
Sbjct: 382 MRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAND 441
Query: 328 FESAFEITKESMDKGWVPNFTTMKKLV 354
E E+ ++ G N T + ++
Sbjct: 442 VEKMMEVYEKMRLSGIKANQTILTTIM 468
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 151/330 (45%), Gaps = 17/330 (5%)
Query: 60 HLDRIALSVAISKLKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAV 119
+D + L A KL + N + L + S P++ + L +S YG+ NA
Sbjct: 139 EIDFLMLITAYGKLGNFNGAERVLSVLSKM-GSTPNVISYTALMES---YGRGGKCNNAE 194
Query: 120 TAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIY---LDFPKNYSIQPDVETYNT 176
F RM+ PS + +L + +KE ++ LD K ++PD + Y+
Sbjct: 195 AIFRRMQSSGP-EPSAITYQIILKTFVEGDKFKEAEEVFETLLD-EKKSPLKPDQKMYHM 252
Query: 177 VIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKY 236
+I + ++G+ + S M V + VT+ N++ F E ++EV K+ M+ +
Sbjct: 253 MIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTY-NSLMSF--ETSYKEVSKIYDQMQ-RS 308
Query: 237 GMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEA 296
+ P + +Y + I + + +R EA ++ + M+ G +P +++ L+ + G +++A
Sbjct: 309 DIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQA 368
Query: 297 KKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTG 356
K VF M++ P+ Y T+ D E A + K G+ PN T L+ G
Sbjct: 369 KTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKG 428
Query: 357 LVGVSKTDDAKELIKQVKEKFTESSDKWDE 386
+K +D ++++ +V EK S K ++
Sbjct: 429 Y---AKANDVEKMM-EVYEKMRLSGIKANQ 454
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 128/309 (41%), Gaps = 10/309 (3%)
Query: 64 IALSVAISKLKDGNHFSTIDQFLRDLPTSR--PDLRNERFLSQSIVLYGQARMLPNAVTA 121
I + + +G+ F ++ L + P +++ I +Y +A A
Sbjct: 210 ITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKV 269
Query: 122 FTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSF 181
F+ M + + S + N+L+ YKEVS+IY D + IQPDV +Y +IK++
Sbjct: 270 FSSMVGK-GVPQSTVTYNSLMS---FETSYKEVSKIY-DQMQRSDIQPDVVSYALLIKAY 324
Query: 182 AESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPA 241
+ S+ EM VRP ++ ++ F E+ V K M + P
Sbjct: 325 GRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR-IFPD 383
Query: 242 LSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFA 301
L +Y + + A+ + + G +PN V++ LI GY ++++ +V+
Sbjct: 384 LWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYE 443
Query: 302 DMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVS 361
M+ G K T+ +F SA KE M+ VP K ++ L
Sbjct: 444 KMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKE-MESCGVPPDQKAKNVLLSLASTQ 502
Query: 362 -KTDDAKEL 369
+ ++AKEL
Sbjct: 503 DELEEAKEL 511
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 140/327 (42%), Gaps = 16/327 (4%)
Query: 32 TALHLLKSETNPERILDICRAASLTPDFHLDRIALSVAISKLKDGNHFSTIDQFLRDLPT 91
TA L + ER+L + TP+ I+ + + G + + R + +
Sbjct: 147 TAYGKLGNFNGAERVLSVLSKMGSTPNV----ISYTALMESYGRGGKCNNAEAIFRRMQS 202
Query: 92 SRPDLRNERFLSQSIVL--YGQARMLPNAVTAFTRMRDEFQ--ITPSVKSLNALLFAALI 147
S P+ ++ I+L + + A F + DE + + P K + +++
Sbjct: 203 SGPE---PSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 259
Query: 148 AKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAV 207
A +Y++ +++ Q V TYN+++ SF S V I +M R+ ++P+ V
Sbjct: 260 AGNYEKARKVFSSMVGKGVPQSTV-TYNSLM-SF--ETSYKEVSKIYDQMQRSDIQPDVV 315
Query: 208 TFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQG 267
+++ I+ + ++ EE V + M + G+ P YN+ + + +AK + +
Sbjct: 316 SYALLIKAYGRARREEEALSVFEEMLDA-GVRPTHKAYNILLDAFAISGMVEQAKTVFKS 374
Query: 268 MISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGD 327
M P+ S++ ++ Y +++ A+K F +K G++P Y TL + D
Sbjct: 375 MRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAND 434
Query: 328 FESAFEITKESMDKGWVPNFTTMKKLV 354
E E+ ++ G N T + ++
Sbjct: 435 VEKMMEVYEKMRLSGIKANQTILTTIM 461
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 95/183 (51%), Gaps = 6/183 (3%)
Query: 125 MRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAES 184
+ +E + TPSV + N +L L AK + +++ D + ++ PD TY+T+I SF +
Sbjct: 145 VHEEAKYTPSVFAYNVVLRNVLRAKQF-DIAHGLFDEMRQRALAPDRYTYSTLITSFGKE 203
Query: 185 GSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMME--EKYGMSPAL 242
G S S L +M+++ V + V +SN IE ++ + K + + ++ G++P L
Sbjct: 204 GMFDSALSWLQKMEQDRVSGDLVLYSNLIE---LSRRLCDYSKAISIFSRLKRSGITPDL 260
Query: 243 STYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFAD 302
YN I K K EA+ L++ M G PN VS+S L+ Y EA VFA+
Sbjct: 261 VAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAE 320
Query: 303 MKK 305
MK+
Sbjct: 321 MKE 323
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 121/286 (42%), Gaps = 21/286 (7%)
Query: 103 SQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFP 162
S I +G+ M +A++ +M + S + +L++ LI E+SR D+
Sbjct: 194 STLITSFGKEGMFDSALSWLQKMEQD------RVSGDLVLYSNLI-----ELSRRLCDYS 242
Query: 163 KNYSI---------QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAI 213
K SI PD+ YN++I + ++ ++ EM+ V PN V++S +
Sbjct: 243 KAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLL 302
Query: 214 EGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGR 273
+ KF E V M+E + L+T N+ I +L EA L +
Sbjct: 303 SVYVENHKFLEALSVFAEMKE-VNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDI 361
Query: 274 KPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFE 333
+PN VS++ ++ Y EA +F M+++ + Y T+ + + E A
Sbjct: 362 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATN 421
Query: 334 ITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTE 379
+ +E +G PN T +++ K D A L ++++ E
Sbjct: 422 LVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVE 467
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 95/213 (44%), Gaps = 3/213 (1%)
Query: 106 IVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNY 165
I +YG+A++ A M +E + P+ S + LL + + E ++ + K
Sbjct: 267 INVYGKAKLFREARLLIKEM-NEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEM-KEV 324
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
+ D+ T N +I + + + + + + PN V+++ + + + F E
Sbjct: 325 NCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEA 384
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
+ ++M+ K + + TYN I K +A L+Q M S G +PN +++S +I
Sbjct: 385 IHLFRLMQRK-DIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIIS 443
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTL 318
+ G LD A +F ++ G + + Y T+
Sbjct: 444 IWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTM 476
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 109/269 (40%), Gaps = 32/269 (11%)
Query: 106 IVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNY 165
I +YGQ M+ A F +R + I P+V S N +L A+ + E ++ +
Sbjct: 337 IDVYGQLDMVKEADRLFWSLR-KMDIEPNVVSYNTILRVYGEAELFGEAIHLF-RLMQRK 394
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFE-- 223
I+ +V TYNT+IK + ++ +++ EM + PNA+T+S I + K +
Sbjct: 395 DIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRA 454
Query: 224 ------------EVGKVLK----MMEEKYGMS------------PALSTYNVRILSLCKL 255
E+ +VL + E+ G+ P I L K
Sbjct: 455 ATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKA 514
Query: 256 KRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCY 315
RT EA + + G + F +I+ Y +VF M+ GY P+S
Sbjct: 515 GRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVI 574
Query: 316 FTLAHFLCEGGDFESAFEITKESMDKGWV 344
+ + + +FE A + +E ++G V
Sbjct: 575 AMVLNAYGKQREFEKADTVYREMQEEGCV 603
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 127/280 (45%), Gaps = 10/280 (3%)
Query: 98 NERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRI 157
N L++ I L+G+ A F++ +EF TP+ K+ L AL + + + +
Sbjct: 230 NLEILNELIALFGKLGKSKAAFDVFSKT-EEFGFTPNAKTY-YLTLEALCKRSFMDWACS 287
Query: 158 YLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSI--LSEMDRNSVRPNAV-TFSNAIE 214
+ + + E +I F + G YS+ L++ S+ P V T A+
Sbjct: 288 VCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALC 347
Query: 215 GFYSEKKF-EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGR 273
F +E+ L + G+ P ++ I SLC+++ +AKALL MIS G
Sbjct: 348 KNDGTITFAQEMLGDLSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGP 403
Query: 274 KPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFE 333
P F+ ++H G+LDEAK+V M+ RG KP+ Y + +GG + A E
Sbjct: 404 APGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQE 463
Query: 334 ITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
I E+ K + T L+ G + + D+A +L+ ++
Sbjct: 464 ILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEM 503
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 94/215 (43%), Gaps = 2/215 (0%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
+ + P+ +TY +++ + S+ +M ++ V N I F E K
Sbjct: 258 EEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKA 317
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISG-GRKPNWVSFS 281
EE V ++ + K P + I +LCK T + G +SG R+ FS
Sbjct: 318 EEAYSVYELAKTKEKSLPPRFVATL-ITALCKNDGTITFAQEMLGDLSGEARRRGIKPFS 376
Query: 282 HLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDK 341
+IH C N+ +AK + DM +G P + + + H + GD + A E+ K +
Sbjct: 377 DVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESR 436
Query: 342 GWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
G P+ T +++G D+A+E++ + K+K
Sbjct: 437 GLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKK 471
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 3/148 (2%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
P N ++ A D E + L ++ ++PDV TY +I +A+ G
Sbjct: 405 PGNAVFNLVVHACSKTGDLDEAKEV-LKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQE 463
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
IL+E + + + VT+ I G+ ++++E K+L M +++G+ P YN I S
Sbjct: 464 ILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEM-DRFGVQPNADEYNKLIQSF 522
Query: 253 C-KLKRTSEAKALLQGMISGGRKPNWVS 279
C K +A+ L + M G N +S
Sbjct: 523 CLKALDWEKAEVLFEEMKQKGLHLNAIS 550
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%)
Query: 175 NTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE 234
N +I +FAE+ V IL EM +P+ +T+++ ++ E+ VL M+E
Sbjct: 181 NRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKE 240
Query: 235 KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLD 294
+S + TYN + + K R + M+ G +P+ +S++ +I GN+
Sbjct: 241 DCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVK 300
Query: 295 EAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKE 337
E+ ++F +MK+R +P Y L L + GDF+SA +++ E
Sbjct: 301 ESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDE 343
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 97/245 (39%), Gaps = 4/245 (1%)
Query: 124 RMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAE 183
R R + P + + N LL A KE + + ++PD T+N + +
Sbjct: 223 RKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRM--RHRVKPDANTFNVLFFGWCR 280
Query: 184 SGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGM--SPA 241
+L EM +P T+ AI+ F +E + M K +P
Sbjct: 281 VRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPT 340
Query: 242 LSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFA 301
T+ + I++L K + E L+ MIS G P+ ++ +I G C +DEA K
Sbjct: 341 AKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLD 400
Query: 302 DMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVS 361
+M +GY P+ Y LCE + A ++ ++ P+ T L++ +
Sbjct: 401 EMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMD 460
Query: 362 KTDDA 366
D A
Sbjct: 461 DPDGA 465
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 105/256 (41%), Gaps = 7/256 (2%)
Query: 124 RMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAE 183
RMR ++ P + N L F +D K+ ++ L+ +P+ TY I +F +
Sbjct: 259 RMRH--RVKPDANTFNVLFFGWCRVRDPKKAMKL-LEEMIEAGHKPENFTYCAAIDTFCQ 315
Query: 184 SG---STSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSP 240
+G + ++ + P A TF+ I K EE +++ M G P
Sbjct: 316 AGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMIST-GCLP 374
Query: 241 ALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVF 300
+STY I +C ++ EA L M + G P+ V+++ + C DEA K++
Sbjct: 375 DVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLY 434
Query: 301 ADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGV 360
M + P Y L E D + AF E + V + T ++ GL
Sbjct: 435 GRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDC 494
Query: 361 SKTDDAKELIKQVKEK 376
+ +A L+++V K
Sbjct: 495 HRAKEACFLLEEVVNK 510
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 96/215 (44%), Gaps = 7/215 (3%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSI----LSEMDRNSVRPNAVTFSNAIEGFYS 218
++YS +P YN +I + + + + I L M RN+ V I Y
Sbjct: 153 EHYSHEPI--AYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYC 210
Query: 219 EKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWV 278
E+ V K K + P ++ +N+ + +LCK E +ALL+ M KP+
Sbjct: 211 ERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDAN 269
Query: 279 SFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKES 338
+F+ L G+C + +A K+ +M + G+KPE+ Y C+ G + A ++
Sbjct: 270 TFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFM 329
Query: 339 MDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
+ KG + T K +V ++K D A+E + +
Sbjct: 330 ITKGSAVSAPTAKTFALMIVALAKNDKAEECFELI 364
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 1/174 (0%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P +T+ +I + A++ + ++ M P+ T+ + IEG +K +E K
Sbjct: 339 PTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKF 398
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
L M K G P + TYN + LC+ ++T EA L M+ P+ +++ LI +
Sbjct: 399 LDEMSNK-GYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFF 457
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
+ D A + +M KR + Y + + L + + A + +E ++KG
Sbjct: 458 EMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKG 511
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 108/245 (44%), Gaps = 4/245 (1%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
P + NALL A Y E + + +N S D TYN ++ ++ +G +
Sbjct: 314 PGTVTYNALLQVFGKAGVYTEALSVLKEMEEN-SCPADSVTYNELVAAYVRAGFSKEAAG 372
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
++ M + V PNA+T++ I+ + K +E K+ M+E G P TYN + L
Sbjct: 373 VIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEA-GCVPNTCTYNAVLSLL 431
Query: 253 CKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDE-AKKVFADMKKRGYKPE 311
K R++E +L M S G PN +++ ++ C +D+ +VF +MK G++P+
Sbjct: 432 GKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPD 490
Query: 312 SPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIK 371
+ TL G A ++ E G+ TT L+ L + +I
Sbjct: 491 RDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVIS 550
Query: 372 QVKEK 376
+K K
Sbjct: 551 DMKSK 555
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 95/205 (46%), Gaps = 8/205 (3%)
Query: 111 QARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPD 170
+ R L + AFT + + P + N++L Y + I L+ + + PD
Sbjct: 608 KCRALAGSERAFTLFK-KHGYKPDMVIFNSMLSIFTRNNMYDQAEGI-LESIREDGLSPD 665
Query: 171 VETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLK 230
+ TYN+++ + G IL ++++ ++P+ V+++ I+GF +E ++L
Sbjct: 666 LVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLS 725
Query: 231 MMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWE 290
M E+ G+ P + TYN + + +E + +++ M +PN ++F ++ GYC
Sbjct: 726 EMTER-GIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRA 784
Query: 291 GNLDEAKKVFADMKKRGYKPESPCY 315
G EA + +K PC+
Sbjct: 785 GKYSEAMDFVSKIKTF-----DPCF 804
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 129/296 (43%), Gaps = 7/296 (2%)
Query: 61 LDRIALSVAISKLKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVT 120
LD + + + L + +S + L +P + L + R + + Y + A+
Sbjct: 173 LDHQVIEIFVRILGRESQYSVAAKLLDKIPL-QEYLLDVRAYTTILHAYSRTGKYEKAID 231
Query: 121 AFTRMRDEFQITPSVKSLNALL-FAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIK 179
F RM+ E +P++ + N +L + + ++++ + LD ++ ++ D T +TV+
Sbjct: 232 LFERMK-EMGPSPTLVTYNVILDVFGKMGRSWRKILGV-LDEMRSKGLKFDEFTCSTVLS 289
Query: 180 SFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMS 239
+ A G +E+ P VT++ ++ F + E VLK MEE
Sbjct: 290 ACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEEN--SC 347
Query: 240 PALS-TYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKK 298
PA S TYN + + + + EA +++ M G PN ++++ +I Y G DEA K
Sbjct: 348 PADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALK 407
Query: 299 VFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
+F MK+ G P + Y + L + ++ + G PN T ++
Sbjct: 408 LFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML 463
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 1/211 (0%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
K+ +P TYN +++ F ++G + S+L EM+ NS ++VT++ + +
Sbjct: 308 KSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFS 367
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
+E V++MM +K G+ P TY I + K + EA L M G PN +++
Sbjct: 368 KEAAGVIEMMTKK-GVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNA 426
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
++ + +E K+ DMK G P + T+ G + + +E G
Sbjct: 427 VLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCG 486
Query: 343 WVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
+ P+ T L++ DA ++ ++
Sbjct: 487 FEPDRDTFNTLISAYGRCGSEVDASKMYGEM 517
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 2/208 (0%)
Query: 128 EFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGST 187
E QI PS L LL A + R + F K + +PD+ +N+++ F +
Sbjct: 589 EGQIFPSWMLLRTLLLANFKCRALAGSERAFTLF-KKHGYKPDMVIFNSMLSIFTRNNMY 647
Query: 188 SSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNV 247
IL + + + P+ VT+++ ++ + + + ++LK +E K + P L +YN
Sbjct: 648 DQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLE-KSQLKPDLVSYNT 706
Query: 248 RILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRG 307
I C+ EA +L M G +P +++ + GY G E + V M K
Sbjct: 707 VIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKND 766
Query: 308 YKPESPCYFTLAHFLCEGGDFESAFEIT 335
+P + + C G + A +
Sbjct: 767 CRPNELTFKMVVDGYCRAGKYSEAMDFV 794
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 2/169 (1%)
Query: 209 FSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRT-SEAKALLQG 267
++ + + K+E+ + + M+E G SP L TYNV + K+ R+ + +L
Sbjct: 213 YTTILHAYSRTGKYEKAIDLFERMKE-MGPSPTLVTYNVILDVFGKMGRSWRKILGVLDE 271
Query: 268 MISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGD 327
M S G K + + S ++ EG L EAK+ FA++K GY+P + Y L + G
Sbjct: 272 MRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGV 331
Query: 328 FESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+ A + KE + + T +LV V + +A +I+ + +K
Sbjct: 332 YTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKK 380
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 89/207 (42%), Gaps = 2/207 (0%)
Query: 169 PDVETYNTVIKSFAESG-STSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
P + TYN ++ F + G S + +L EM ++ + T S + E E +
Sbjct: 243 PTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKE 302
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
++ G P TYN + K +EA ++L+ M + V+++ L+ Y
Sbjct: 303 FFAELKS-CGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAY 361
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
G EA V M K+G P + Y T+ + G + A ++ + G VPN
Sbjct: 362 VRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNT 421
Query: 348 TTMKKLVTGLVGVSKTDDAKELIKQVK 374
T +++ L S++++ +++ +K
Sbjct: 422 CTYNAVLSLLGKKSRSNEMIKMLCDMK 448
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 81/188 (43%), Gaps = 5/188 (2%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSN--AIEGFYSEKKFEEVG 226
P+ TYN V+ + ++ + +L +M N PN T++ A+ G KF V
Sbjct: 419 PNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKF--VN 476
Query: 227 KVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHG 286
+V + M+ G P T+N I + + +A + M G +++ L++
Sbjct: 477 RVFREMKS-CGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNA 535
Query: 287 YCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPN 346
+G+ + V +DMK +G+KP Y + +GG++ I + P+
Sbjct: 536 LARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPS 595
Query: 347 FTTMKKLV 354
+ ++ L+
Sbjct: 596 WMLLRTLL 603
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 116/258 (44%), Gaps = 10/258 (3%)
Query: 129 FQITPSVKSLNALL--FAALIAKD--YKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAES 184
+ P V + N L+ + I D Y R+ + I+PDV TYN++I A++
Sbjct: 42 LGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRM-----REAGIEPDVTTYNSLISGAAKN 96
Query: 185 GSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALST 244
+ V + EM + + P+ +++ + ++ + E K+L G+ P + T
Sbjct: 97 LMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDT 156
Query: 245 YNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMK 304
YN+ + +LCK T A L + + S KP ++++ LI+G C + + ++K
Sbjct: 157 YNILLDALCKSGHTDNAIELFKHLKS-RVKPELMTYNILINGLCKSRRVGSVDWMMRELK 215
Query: 305 KRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTD 364
K GY P + Y T+ + E ++ + +G+ + +V+ L+ + +
Sbjct: 216 KSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAE 275
Query: 365 DAKELIKQVKEKFTESSD 382
+A E + ++ T S D
Sbjct: 276 EAYECMHELVRSGTRSQD 293
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 177 VIKSFAESGSTSSVYSILSEMDRNSVRP-NAVTFSNAIEGFYSEKKFEEVGKVLKMMEEK 235
V+ + ++G Y + E+ R+ R + V+++ + ++ + + V +L+ +E K
Sbjct: 264 VVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMK 323
Query: 236 YGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDE 295
G+ P T+ + + L + T A+ L + G +P+ V+ + LI G C G++D
Sbjct: 324 -GLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDR 382
Query: 296 AKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
A ++FA M+ R + Y ++ H LC+ G A ++ +KG
Sbjct: 383 AMRLFASMEVR----DEFTYTSVVHNLCKDGRLVCASKLLLSCYNKG 425
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 89/210 (42%), Gaps = 5/210 (2%)
Query: 169 PDVET--YNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVG 226
P + T N + S + + ++L + R V P+ +T++ I+G+ +E
Sbjct: 9 PGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAY 68
Query: 227 KVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHG 286
V + M E G+ P ++TYN I K + L M+ G P+ S++ L+
Sbjct: 69 AVTRRMREA-GIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSC 127
Query: 287 YCWEGNLDEAKKVF-ADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
Y G EA K+ D+ G P Y L LC+ G ++A E+ K + P
Sbjct: 128 YFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKH-LKSRVKP 186
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
T L+ GL + +++++K+
Sbjct: 187 ELMTYNILINGLCKSRRVGSVDWMMRELKK 216
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 107/241 (44%), Gaps = 5/241 (2%)
Query: 139 NALLFAALIA--KDYKEVSRIY--LDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSIL 194
N+ +F+ L+A +D E + + L K+ ++PD + YN VI +F + +
Sbjct: 408 NSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTF 467
Query: 195 SEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCK 254
M + P+ VT++ I+ + ++ + ME + G P +TYN+ I S
Sbjct: 468 DRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERR-GCLPCATTYNIMINSYGD 526
Query: 255 LKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPC 314
+R + K LL M S G PN V+ + L+ Y G ++A + +MK G KP S
Sbjct: 527 QERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTM 586
Query: 315 YFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVK 374
Y L + + G E A + G P+ + L+ + +A +++ +K
Sbjct: 587 YNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMK 646
Query: 375 E 375
E
Sbjct: 647 E 647
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 126/291 (43%), Gaps = 8/291 (2%)
Query: 58 DFHLDRIALSVAISKLKDGNHFSTIDQFLRDLPT--SRPDLRNERFLSQSIVLYGQARML 115
D + S ++ +D + Q L+++ + +PD +F + I +G+ L
Sbjct: 404 DVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPD---RQFYNVVIDTFGKFNCL 460
Query: 116 PNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYN 175
+A+T F RM E I P + N L+ + ++ + + P TYN
Sbjct: 461 DHAMTTFDRMLSE-GIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCL-PCATTYN 518
Query: 176 TVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEK 235
+I S+ + + +L +M + PN VT + ++ + +F + + L+ M+
Sbjct: 519 IMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMK-S 577
Query: 236 YGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDE 295
G+ P+ + YN I + + + +A + M S G KP+ ++ + LI+ + + E
Sbjct: 578 VGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAE 637
Query: 296 AKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPN 346
A V MK+ G KP+ Y TL L F+ + +E + G P+
Sbjct: 638 AFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 688
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 9/212 (4%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVY--SILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
Q D Y+ VI+S S SV + E++R+ + + ++ I GF K +
Sbjct: 229 QSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGF---AKSGDP 285
Query: 226 GKVLKM--MEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHL 283
K L++ M + G+S +T I +L RT EA+AL + + G KP +++ L
Sbjct: 286 SKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNAL 345
Query: 284 IHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGW 343
+ GY G L +A+ + ++M+KRG P+ Y L G +ESA + KE M+ G
Sbjct: 346 LKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKE-MEAGD 404
Query: 344 V-PNFTTMKKLVTGLVGVSKTDDAKELIKQVK 374
V PN +L+ G + +++K++K
Sbjct: 405 VQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMK 436
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 1/197 (0%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
I+PD T+NT+I + G + M+R P A T++ I + +++++++
Sbjct: 474 GIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDM 533
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
++L M+ + G+ P + T+ + K R ++A L+ M S G KP+ ++ LI+
Sbjct: 534 KRLLGKMKSQ-GILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALIN 592
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
Y G ++A F M G KP +L + E AF + + + G P
Sbjct: 593 AYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKP 652
Query: 346 NFTTMKKLVTGLVGVSK 362
+ T L+ L+ V K
Sbjct: 653 DVVTYTTLMKALIRVDK 669
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 85/182 (46%), Gaps = 1/182 (0%)
Query: 173 TYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMM 232
T ++I + A+SG T ++ E+ ++ ++P ++ ++G+ ++ ++ M
Sbjct: 306 TLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEM 365
Query: 233 EEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGN 292
E++ G+SP TY++ I + R A+ +L+ M +G +PN FS L+ G+ G
Sbjct: 366 EKR-GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGE 424
Query: 293 LDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKK 352
+ +V +MK G KP+ Y + + + A + +G P+ T
Sbjct: 425 WQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNT 484
Query: 353 LV 354
L+
Sbjct: 485 LI 486
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 4/208 (1%)
Query: 167 IQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVG 226
+ PD+E + SF + E + V+ + +F NA+ E+
Sbjct: 182 VNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESF-NALLRCLCERSHVSAA 240
Query: 227 KVLKMMEEKYGMSPALS-TYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
K + K G P S +YN+ I KL E + +L+ M+ G P+ +S+SHLI
Sbjct: 241 K--SVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIE 298
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
G G ++++ ++F ++K +G P++ Y + DF+ + + +D+ P
Sbjct: 299 GLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEP 358
Query: 346 NFTTMKKLVTGLVGVSKTDDAKELIKQV 373
N T KLV+GL+ K DA E+ +++
Sbjct: 359 NLETYSKLVSGLIKGRKVSDALEIFEEM 386
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 38/243 (15%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
PD +Y+ +I+ +G + I + P+A ++ I F S + F+E +
Sbjct: 288 PDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRY 347
Query: 229 LK-MMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
+ M++E+ P L TY+ + L K ++ S+A + + M+S G P + +
Sbjct: 348 YRRMLDEE--CEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPL 405
Query: 288 CWEG-----------------NLDEAK------------------KVFADMKKRGYKPES 312
C G + E+ V+ +M++ GY +
Sbjct: 406 CSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDV 465
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQ 372
Y + LC G E+A + +E+M KG+ PN +L + L+ +KT+ A +L +
Sbjct: 466 EVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLK 525
Query: 373 VKE 375
+K+
Sbjct: 526 IKK 528
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 115/253 (45%), Gaps = 9/253 (3%)
Query: 142 LFAAL-IAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRN 200
L AAL + K+ KE S +Y S PD+ TYN++I G + E+ +
Sbjct: 264 LDAALSLFKEMKERSSVY-----GSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVS 318
Query: 201 SVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSE 260
P+ T+ I+G + ++ ++ M+ G P YN + K ++ +E
Sbjct: 319 GHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYN-GFVPDTIVYNCLLDGTLKARKVTE 377
Query: 261 AKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAH 320
A L + M+ G + + +++ LI G G + +F D+KK+G ++ + +
Sbjct: 378 ACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGL 437
Query: 321 FLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE-KFTE 379
LC G E A ++ +E +G+ + T+ L+ G + D ++L+K ++E
Sbjct: 438 QLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVP 497
Query: 380 SSDKWDE-IEAEL 391
+ +W+ +EA L
Sbjct: 498 NVLRWNAGVEASL 510
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 6/183 (3%)
Query: 170 DVETYNTVIKSFAESGSTS---SVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVG 226
DV+ NT + + G S ++ I + M + + T+++ + F + F+
Sbjct: 593 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDL--TSYTYNSMMSSFVKKGYFQTAR 650
Query: 227 KVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHG 286
VL M E + + ++TYNV I L K+ R A A+L + G + V ++ LI+
Sbjct: 651 GVLDQMFENF-CAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINA 709
Query: 287 YCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPN 346
LDEA ++F MK G P+ Y T+ + G + A++ K +D G +PN
Sbjct: 710 LGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPN 769
Query: 347 FTT 349
T
Sbjct: 770 HVT 772
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 104/238 (43%), Gaps = 9/238 (3%)
Query: 115 LPNAVTAFTRMRDEFQI-----TPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQP 169
L A++ F M++ + P + + N+L+ + K+ + I D K +P
Sbjct: 264 LDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKD-ALIVWDELKVSGHEP 322
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL 229
D TY +I+ +S I EM N P+ + ++ ++G +K E ++
Sbjct: 323 DNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLF 382
Query: 230 -KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
KM++E G+ + TYN+ I L + R L + G+ + ++FS + C
Sbjct: 383 EKMVQE--GVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLC 440
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPN 346
EG L+ A K+ +M+ RG+ + +L + G ++ ++ K + VPN
Sbjct: 441 REGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPN 498
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 94/247 (38%), Gaps = 36/247 (14%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
P ++N LL A E R++ + D +YN I F G + S
Sbjct: 210 PGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALS 269
Query: 193 ILSEM-DRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMS--PALSTYNVRI 249
+ EM +R+SV YG S P + TYN I
Sbjct: 270 LFKEMKERSSV---------------------------------YGSSFGPDICTYNSLI 296
Query: 250 LSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYK 309
LC + +A + + G +P+ ++ LI G C +D+A +++ +M+ G+
Sbjct: 297 HVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFV 356
Query: 310 PESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKEL 369
P++ Y L + A ++ ++ + +G + T L+ GL + + L
Sbjct: 357 PDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTL 416
Query: 370 IKQVKEK 376
+K+K
Sbjct: 417 FCDLKKK 423
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 120/268 (44%), Gaps = 8/268 (2%)
Query: 85 FLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFA 144
L +LP + + R+ R + +I ++ +A + M D+ + P + A+L
Sbjct: 260 LLSNLP-DKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAM-DKINVYPDNVTC-AILIT 316
Query: 145 AL--IAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSV 202
L + KEV I+ + ++ + + ++KSF + G I +EM++ +
Sbjct: 317 TLRKAGRSAKEVWEIFEKMSEK-GVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGI 375
Query: 203 RPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAK 262
R N + ++ ++ + EEV + M +K G+ P+ +TYN+ + + + + +
Sbjct: 376 RSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDK-GLKPSAATYNILMDAYARRMQPDIVE 434
Query: 263 ALLQGMISGGRKPNWVSFSHLIHGYCWEGNL-DEAKKVFADMKKRGYKPESPCYFTLAHF 321
LL+ M G +PN S++ LI Y + D A F MKK G KP S Y L H
Sbjct: 435 TLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHA 494
Query: 322 LCEGGDFESAFEITKESMDKGWVPNFTT 349
G E A+ +E +G P+ T
Sbjct: 495 YSVSGWHEKAYASFEEMCKEGIKPSVET 522
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 121/260 (46%), Gaps = 9/260 (3%)
Query: 113 RMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVE 172
RM P+ V R ++ + P+VKS L+ A K +++ K ++P
Sbjct: 427 RMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSH 486
Query: 173 TYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLK-- 230
+Y +I +++ SG Y+ EM + ++P+ T+++ ++ F ++ + GK+++
Sbjct: 487 SYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAF---RRSGDTGKLMEIW 543
Query: 231 --MMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
M+ EK + TYN + K EA+ ++ G +P+ ++++ L++ Y
Sbjct: 544 KLMLREK--IKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYA 601
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
G + ++ +M KP+S Y T+ + DF+ AF K + G VP+
Sbjct: 602 RGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPR 661
Query: 349 TMKKLVTGLVGVSKTDDAKE 368
+ +KL L +KT + K+
Sbjct: 662 SYEKLRAILEDKAKTKNRKD 681
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 2/197 (1%)
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFY-SEKKFEEVGKV 228
DV YN I + S + + MD+ +V P+ VT + I + + +EV ++
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
+ M EK G+ + + + S C EA + M G + N + ++ L+ Y
Sbjct: 332 FEKMSEK-GVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYN 390
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
+++E + +F +M+ +G KP + Y L + + +E D G PN
Sbjct: 391 KSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVK 450
Query: 349 TMKKLVTGLVGVSKTDD 365
+ L++ K D
Sbjct: 451 SYTCLISAYGRTKKMSD 467
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/235 (19%), Positives = 101/235 (42%), Gaps = 1/235 (0%)
Query: 139 NALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMD 198
N L+ A + +EV ++ + ++ ++P TYN ++ ++A V ++L EM+
Sbjct: 383 NTLMDAYNKSNHIEEVEGLFTEM-RDKGLKPSAATYNILMDAYARRMQPDIVETLLREME 441
Query: 199 RNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRT 258
+ PN +++ I + KK ++ + +K G+ P+ +Y I +
Sbjct: 442 DLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWH 501
Query: 259 SEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTL 318
+A A + M G KP+ +++ ++ + G+ + +++ M + K Y TL
Sbjct: 502 EKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTL 561
Query: 319 AHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
+ G + A ++ E G P+ T L+ + +L+K++
Sbjct: 562 LDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEM 616
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 7/247 (2%)
Query: 134 SVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSI 193
SV +LN + L + ++Y + ++ +V T+N VI SF + S+
Sbjct: 182 SVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVE-NVNTFNLVIYSFCKESKLFEALSV 240
Query: 194 LSEMDRNSVRPNAVTFSNAIEGFY--SEKKF--EEVGKVLKMMEEKYGMSPALSTYNVRI 249
M + V PN V+F+ I+G + +F + +GK + MM + +SP TYN I
Sbjct: 241 FYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGK-MGMMSGNF-VSPNAVTYNSVI 298
Query: 250 LSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYK 309
CK R A+ + M+ G N ++ L+ Y G+ DEA ++ +M +G
Sbjct: 299 NGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLV 358
Query: 310 PESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKEL 369
+ Y ++ ++L GD E A + ++ K + T +V GL +A E
Sbjct: 359 VNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEF 418
Query: 370 IKQVKEK 376
+Q+ EK
Sbjct: 419 QRQISEK 425
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 7/188 (3%)
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL 229
D+ +NT++ F + IL M + +A++F I+G+ E K E ++
Sbjct: 430 DIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIY 489
Query: 230 KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW 289
M K + L YN + L K A+A++ M + V+++ L++
Sbjct: 490 DGMI-KMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAM----EIKDIVTYNTLLNESLK 544
Query: 290 EGNLDEAKKVFADMKKR-GYKPESPCYFT-LAHFLCEGGDFESAFEITKESMDKGWVPNF 347
GN++EA + + M+K+ G K S F + + LC+ G +E A E+ K +++G VP+
Sbjct: 545 TGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDS 604
Query: 348 TTMKKLVT 355
T L+T
Sbjct: 605 ITYGTLIT 612
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 89/208 (42%), Gaps = 4/208 (1%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDR---NSVRPNAVTFSNAIEGFYSEKKF 222
+ P+V ++N +I ++G +L +M N V PNAVT+++ I GF +
Sbjct: 248 GVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRL 307
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
+ ++ M K G+ TY + + + + EA L M S G N V ++
Sbjct: 308 DLAERIRGDMV-KSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNS 366
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
+++ EG+++ A V DM + + + + LC G + A E ++ +K
Sbjct: 367 IVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKK 426
Query: 343 WVPNFTTMKKLVTGLVGVSKTDDAKELI 370
V + L+ V K A +++
Sbjct: 427 LVEDIVCHNTLMHHFVRDKKLACADQIL 454
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 105/257 (40%), Gaps = 4/257 (1%)
Query: 115 LPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIY--LDFPKNYSIQPDVE 172
L A++ F RM + + P+V S N ++ A D + ++ + + P+
Sbjct: 234 LFEALSVFYRML-KCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAV 292
Query: 173 TYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMM 232
TYN+VI F ++G I +M ++ V N T+ ++ + +E ++ M
Sbjct: 293 TYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEM 352
Query: 233 EEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGN 292
K G+ YN + L A ++L+ M S + + + + ++ G C G
Sbjct: 353 TSK-GLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGY 411
Query: 293 LDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKK 352
+ EA + + ++ + C+ TL H A +I + +G + +
Sbjct: 412 VKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGT 471
Query: 353 LVTGLVGVSKTDDAKEL 369
L+ G + K + A E+
Sbjct: 472 LIDGYLKEGKLERALEI 488
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 1/205 (0%)
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL 229
D TY +I S A+SG + + + +M +RP+ FS+ ++ + + KV
Sbjct: 312 DGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVY 371
Query: 230 KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW 289
M+ +G P+ + + I S K + A L M G +PN+ ++ +I +
Sbjct: 372 MEMQ-GFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAK 430
Query: 290 EGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTT 349
G L+ A VF DM+K G+ P Y L G +SA +I + G P ++
Sbjct: 431 SGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSS 490
Query: 350 MKKLVTGLVGVSKTDDAKELIKQVK 374
L+T L D A +++ ++K
Sbjct: 491 YISLLTLLANKRLVDVAGKILLEMK 515
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 1/200 (0%)
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL 229
D +TYN ++ F G + I M++ + T+ I + + K+
Sbjct: 277 DTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLF 336
Query: 230 KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW 289
+ M+E+ + P+ S ++ + S+ K R + + M G +P+ F LI Y
Sbjct: 337 QQMKER-KLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAK 395
Query: 290 EGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTT 349
G LD A +++ +MKK G++P Y + + G E A + K+ G++P +T
Sbjct: 396 AGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPST 455
Query: 350 MKKLVTGLVGVSKTDDAKEL 369
L+ G + D A ++
Sbjct: 456 YSCLLEMHAGSGQVDSAMKI 475
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 102/230 (44%), Gaps = 3/230 (1%)
Query: 148 AKDYKEVSRIYLDFPKNYSIQPDV--ETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPN 205
+D+ + ++ + ++ S D+ YN VI+ A++ + + + + +
Sbjct: 218 GRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKID 277
Query: 206 AVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALL 265
T++N + F ++ + ++ + ME+ + STY + I SL K R A L
Sbjct: 278 TQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDG-STYELIIPSLAKSGRLDAAFKLF 336
Query: 266 QGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEG 325
Q M +P++ FS L+ G LD + KV+ +M+ G++P + + +L +
Sbjct: 337 QQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKA 396
Query: 326 GDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
G ++A + E G+ PNF ++ K + A + K +++
Sbjct: 397 GKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEK 446
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 3/194 (1%)
Query: 115 LPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETY 174
L A F +M+ E ++ PS ++L+ + A ++Y++ + + +P +
Sbjct: 329 LDAAFKLFQQMK-ERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEM-QGFGHRPSATMF 386
Query: 175 NTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE 234
++I S+A++G + + EM ++ RPN ++ IE K E V K ME
Sbjct: 387 VSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDME- 445
Query: 235 KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLD 294
K G P STY+ + + A + M + G +P S+ L+ + +D
Sbjct: 446 KAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVD 505
Query: 295 EAKKVFADMKKRGY 308
A K+ +MK GY
Sbjct: 506 VAGKILLEMKAMGY 519
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 108/247 (43%), Gaps = 18/247 (7%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVR--PNAVTFSNAIEGFYS-- 218
K Y +PDV YNT+I + G+ +L +M R P+ T++ I +
Sbjct: 192 KEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYG 251
Query: 219 ---------EKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMI 269
++ E ++ + M + G P + TYN I CK R A L + M
Sbjct: 252 MQTGCRKAIRRRMWEANRMFREMLFR-GFVPDVVTYNCLIDGCCKTNRIGRALELFEDMK 310
Query: 270 SGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYK-PESPCYFTLAHFLCEGGDF 328
+ G PN V+++ I Y ++ A ++ MKK G+ P S Y L H L E
Sbjct: 311 TKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRA 370
Query: 329 ESAFEITKESMDKGWVPNFTTMKKLVTGLV--GVSKTDDAKELIKQVKEKFTESSDKWDE 386
A ++ E ++ G VP T K + L G++ T D +EL K+++E + + +
Sbjct: 371 AEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLD-EELHKRMREGIQQRYSRVMK 429
Query: 387 IEAELIK 393
I+ + +
Sbjct: 430 IKPTMAR 436
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 123/307 (40%), Gaps = 39/307 (12%)
Query: 73 LKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLY----GQARMLPNAVTAFTRMRDE 128
L GN F + FLR + SR + + SI G+ + A+ F RM+ E
Sbjct: 137 LAKGNDFKGLWDFLRQV--SRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMK-E 193
Query: 129 FQITPSVKSLNALLFAALIAKDYKEVSRIYLD---FPKNYSIQPDVETYNTVIKSFAESG 185
+ P V + N ++ A ++K+ +R LD P + PD TY +I S+ G
Sbjct: 194 YHCKPDVYAYNTIINALCRVGNFKK-ARFLLDQMQLP-GFRYPPDTYTYTILISSYCRYG 251
Query: 186 STSSVYS-----------ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE 234
+ + EM P+ VT++ I+G K +G+ L++ E+
Sbjct: 252 MQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCC---KTNRIGRALELFED 308
Query: 235 --KYGMSPALSTYN--VRILSLCKLKRTSEAKALLQGMIS----GGRKPNWVSFSHLIHG 286
G P TYN +R S+ T+E + ++ M + G P +++ LIH
Sbjct: 309 MKTKGCVPNQVTYNSFIRYYSV-----TNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHA 363
Query: 287 YCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPN 346
EA+ + +M + G P Y + L G + E + M +G
Sbjct: 364 LVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELHKRMREGIQQR 423
Query: 347 FTTMKKL 353
++ + K+
Sbjct: 424 YSRVMKI 430
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 100/209 (47%), Gaps = 1/209 (0%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
+PD+ TYN ++ + ++ +++EM R+ ++ +A +++ ++ ++
Sbjct: 252 EPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYN 311
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
+ E G +S Y+ I + C+ T +A L + M G N V+++ LI +
Sbjct: 312 FMVKEMEPRGFCDVVS-YSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAF 370
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
EGN AKK+ M + G P+ Y T+ LC+ G+ + A+ + + ++ P+
Sbjct: 371 LREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDA 430
Query: 348 TTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+ L++GL + +A +L + +K K
Sbjct: 431 ISYNSLISGLCRSGRVTEAIKLFEDMKGK 459
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 4/224 (1%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYS-ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEE 224
IQ D +YN ++K Y+ ++ EM+ + V++S IE F +
Sbjct: 285 GIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETFCRASNTRK 343
Query: 225 VGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLI 284
++ + M +K GM + TY I + + +S AK LL M G P+ + ++ ++
Sbjct: 344 AYRLFEEMRQK-GMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTIL 402
Query: 285 HGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWV 344
C GN+D+A VF DM + P++ Y +L LC G A ++ ++ K
Sbjct: 403 DHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECC 462
Query: 345 PNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK-FTESSDKWDEI 387
P+ T K ++ GL+ K A ++ Q+ +K FT D D +
Sbjct: 463 PDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTL 506
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 85/200 (42%), Gaps = 1/200 (0%)
Query: 173 TYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMM 232
Y + I + +SG + + EM +S R + ++ I E +FE + M
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70
Query: 233 EEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGN 292
+ G S TY+ I LCK+K+ ALL M + G P+ +F+ + C E
Sbjct: 71 KPM-GFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 293 LDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKK 352
+ A + F M +RG +P+ Y L + L G A EI + G P+
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189
Query: 353 LVTGLVGVSKTDDAKELIKQ 372
LV GL K D A E++ +
Sbjct: 190 LVVGLCHARKVDLAYEMVAE 209
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 2/163 (1%)
Query: 208 TFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQG 267
T+S I G KKF+ + +L ME G P + +NV + LC+ + A
Sbjct: 81 TYSRFISGLCKVKKFDLIDALLSDME-TLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFC 139
Query: 268 MISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGD 327
M+ GR+P+ VS++ LI+G G + +A +++ M + G P++ L LC
Sbjct: 140 MVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARK 199
Query: 328 FESAFEITKESMDKGWVPNFTTM-KKLVTGLVGVSKTDDAKEL 369
+ A+E+ E + V T + L++G + + A+ L
Sbjct: 200 VDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEAL 242
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 92/212 (43%), Gaps = 4/212 (1%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNS-VRPNAVTFSNAIEGFYSEKKFEE 224
+ PD + ++ + Y +++E +++ V+ + V ++ I GF + E+
Sbjct: 179 GVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEK 238
Query: 225 VGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLI 284
+ LK K G P L TYNV + A+ ++ M+ G + + S++ L+
Sbjct: 239 -AEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLL 297
Query: 285 HGYCWEGNLDEAKKVFA-DMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGW 343
+C + D+ +M+ RG+ + Y TL C + A+ + +E KG
Sbjct: 298 KRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGM 356
Query: 344 VPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
V N T L+ + + AK+L+ Q+ E
Sbjct: 357 VMNVVTYTSLIKAFLREGNSSVAKKLLDQMTE 388
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 107/248 (43%), Gaps = 7/248 (2%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
PS+ S LL A + K Y +S I + ++ + D +N VI +F+ESG+
Sbjct: 78 PSLISYTTLLAAMTVQKQYGSISSIVSEVEQS-GTKLDSIFFNAVINAFSESGNMEDAVQ 136
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMM--EEKYGMSPALSTYNVRIL 250
L +M + P T++ I+G+ K E ++L +M E + P + T+NV +
Sbjct: 137 ALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQ 196
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFAD---MKKRG 307
+ CK K+ EA +++ M G +P+ V+++ + Y +G A+ + MK++
Sbjct: 197 AWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKA 256
Query: 308 YKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAK 367
C + + C G + + N L+ G V V D
Sbjct: 257 KPNGRTCGIVVGGY-CREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGID 315
Query: 368 ELIKQVKE 375
E++ +KE
Sbjct: 316 EVLTLMKE 323
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 137/313 (43%), Gaps = 9/313 (2%)
Query: 64 IALSVAISKLKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFT 123
I+ + ++ + + +I + ++ S L + F + I + ++ + +AV A
Sbjct: 81 ISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKL-DSIFFNAVINAFSESGNMEDAVQALL 139
Query: 124 RMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDF---PKNYSIQPDVETYNTVIKS 180
+M+ E + P+ + N L+ IA + S + LD N + P++ T+N ++++
Sbjct: 140 KMK-ELGLNPTTSTYNTLIKGYGIAGKPERSSEL-LDLMLEEGNVDVGPNIRTFNVLVQA 197
Query: 181 FAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEK--KFEEVGKVLKMMEEKYGM 238
+ + + ++ +M+ VRP+ VT+ N I Y +K +V++ M K
Sbjct: 198 WCKKKKVEEAWEVVKKMEECGVRPDTVTY-NTIATCYVQKGETVRAESEVVEKMVMKEKA 256
Query: 239 SPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKK 298
P T + + C+ R + ++ M + N V F+ LI+G+ + D +
Sbjct: 257 KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDE 316
Query: 299 VFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLV 358
V MK+ K + Y T+ + G E A ++ KE + G P+ L G V
Sbjct: 317 VLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYV 376
Query: 359 GVSKTDDAKELIK 371
+ A+EL++
Sbjct: 377 RAKEPKKAEELLE 389
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 2/217 (0%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
K ++ ++ +N++I F E + +L+ M +V+ + +T+S + + S
Sbjct: 287 KEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYM 346
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
E+ +V K M K G+ P Y++ + K +A+ LL+ +I R PN V F+
Sbjct: 347 EKAAQVFKEMV-KAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR-PNVVIFTT 404
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
+I G+C G++D+A +VF M K G P + TL E A E+ + G
Sbjct: 405 VISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCG 464
Query: 343 WVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTE 379
P +T L TD++ + I +K K E
Sbjct: 465 VKPENSTFLLLAEAWRVAGLTDESNKAINALKCKDIE 501
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 73/155 (47%), Gaps = 4/155 (2%)
Query: 224 EVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHL 283
E V K + E G P+L +Y + ++ K+ +++ + G K + + F+ +
Sbjct: 63 EAQTVFKTLAET-GHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAV 121
Query: 284 IHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGW 343
I+ + GN+++A + MK+ G P + Y TL G E + E+ +++G
Sbjct: 122 INAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGN 181
Query: 344 V---PNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
V PN T LV K ++A E++K+++E
Sbjct: 182 VDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEE 216
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 4/222 (1%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
K+ ++P +YN +I + G Y +L E P+ T+ +E E
Sbjct: 334 KSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDT 393
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
+ VL++M K G + YN+ + LC + +E +L M+ G +P+ + +
Sbjct: 394 GKARNVLELMLRKEG-ADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNT 452
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGY-KPESPCYFTLAHFLCEGGDFESAFEITKESMDK 341
+I+G C G +D+A KV DM + P++ T+ L G E A ++ M +
Sbjct: 453 VINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPE 512
Query: 342 GWV-PNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTESSD 382
+ P ++ GL + K D+A + Q+ EK + ++D
Sbjct: 513 NKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQL-EKASVTAD 553
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 139/348 (39%), Gaps = 12/348 (3%)
Query: 42 NPERILDICRAASLTPDFHLDRIALSVAISKLKDGNHFSTIDQ-FLRDLPTS-RPDLRNE 99
NP+ L I L + D + LS I L D F + FL L + PD R
Sbjct: 70 NPDEALRILDGLCLRG-YRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTC 128
Query: 100 RFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYL 159
+ ++ + + EF PS+ + N L+ + ++
Sbjct: 129 NVIIARLLYSRSPVSTLGVIHRLIGFKKEF--VPSLTNYNRLMNQLCTIYRVIDAHKLVF 186
Query: 160 DFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSE 219
D +N PDV T+ T+I + E + + EM +RPN++T S I GF
Sbjct: 187 DM-RNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKM 245
Query: 220 KKFEEVGKVLK----MMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKP 275
+ E K++K M+ + S + + + S+C+ ++ + + M
Sbjct: 246 RDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVN 305
Query: 276 NWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEIT 335
++ H+I C A ++ MK +G KP Y + H LC+ G A+++
Sbjct: 306 VEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLL 365
Query: 336 KESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTESSDK 383
+E + + P+ T K L+ L T A+ +++ + K E +D+
Sbjct: 366 EEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRK--EGADR 411
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 1/189 (0%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNS-VRPNAVTFSNAIEGFYSEKKFEEVG 226
+PD T NTVI + G +L +M P+AVT + + G ++ + EE
Sbjct: 444 RPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEAL 503
Query: 227 KVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHG 286
VL + + + P + YN I L KL + EA ++ + + +++ +I G
Sbjct: 504 DVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDG 563
Query: 287 YCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPN 346
C +D AKK + D+ + ++ Y LC+ G A + D G +PN
Sbjct: 564 LCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPN 623
Query: 347 FTTMKKLVT 355
++
Sbjct: 624 VVCYNTVIA 632
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 85/222 (38%), Gaps = 2/222 (0%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
P +LN ++ + ++ D PD T NTV+ G
Sbjct: 445 PDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALD 504
Query: 193 ILSE-MDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILS 251
+L+ M N ++P V ++ I G + K +E V +E K ++ +TY + I
Sbjct: 505 VLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLE-KASVTADSTTYAIIIDG 563
Query: 252 LCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPE 311
LC + AK +I + + ++ + G C G L +A D+ G P
Sbjct: 564 LCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPN 623
Query: 312 SPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKL 353
CY T+ G A++I +E G P+ T + L
Sbjct: 624 VVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 3/132 (2%)
Query: 248 RILSLCKLKRT-SEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKR 306
RI S+C ++R EA +L G+ G +P+ ++ S +IH C G DEA + F
Sbjct: 60 RIHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLAS 119
Query: 307 GYKP-ESPCYFTLAHFLCEGGDFESAFEITKE-SMDKGWVPNFTTMKKLVTGLVGVSKTD 364
G+ P E C +A L + I + K +VP+ T +L+ L + +
Sbjct: 120 GFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVI 179
Query: 365 DAKELIKQVKEK 376
DA +L+ ++ +
Sbjct: 180 DAHKLVFDMRNR 191
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 134/339 (39%), Gaps = 48/339 (14%)
Query: 76 GNH--FSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITP 133
GNH F+ +RD+ D R FL Y A A+ F M D+F+ TP
Sbjct: 166 GNHQKFNIAWCLIRDMFNVSKDTRKAMFLMMD--RYAAANDTSQAIRTFDIM-DKFKHTP 222
Query: 134 SVKSLNALLFAAL-----------------------------------IAKDYKEVSRIY 158
++ LL A I D E RI+
Sbjct: 223 YDEAFQGLLCALCRHGHIEKAEEFMLASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIW 282
Query: 159 LDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYS 218
+ NY I P+ ++Y+ +I F++ G+ + EM + + P +++ +
Sbjct: 283 REMG-NYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTR 341
Query: 219 EKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWV 278
E F+E K++K + E+ G+ P TYN I LC+ + A+ +L MIS P
Sbjct: 342 EDCFDEAMKLMKKLNEE-GLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVD 400
Query: 279 SFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKES 338
+F H + N ++ +V MK P + + L +G E+A +I E
Sbjct: 401 TF----HAFLEAVNFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAE- 455
Query: 339 MDK-GWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
MD+ V N + GL+ + A+E+ ++K K
Sbjct: 456 MDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSK 494
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 88/188 (46%), Gaps = 9/188 (4%)
Query: 124 RMRDEFQ---ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKS 180
R+ DE + + P ++ N+L++ + E ++ + ++PD TYN++I+
Sbjct: 315 RLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEE-GLKPDSVTYNSMIRP 373
Query: 181 FAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSP 240
E+G ++L+ M ++ P TF +E EK E +G+ +K+ + + P
Sbjct: 374 LCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFEKTLEVLGQ-MKISD----LGP 428
Query: 241 ALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVF 300
T+ + + L K K+ A + M N + I G G L++A++++
Sbjct: 429 TEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIY 488
Query: 301 ADMKKRGY 308
++MK +G+
Sbjct: 489 SEMKSKGF 496
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 110/263 (41%), Gaps = 40/263 (15%)
Query: 118 AVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTV 177
A T F R EF +K++N +L + + E R + D + +PDV +Y T+
Sbjct: 232 AETLFCSRRREFGC--DIKAMNMILNGWCVLGNVHEAKRFWKDIIAS-KCRPDVVSYGTM 288
Query: 178 IKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYG 237
I + + G + M P+ +N I+ +K+ E +V + + EK G
Sbjct: 289 INALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEK-G 347
Query: 238 MSPALSTYNVRILSLCKLKRTSEAKALLQGM-ISGGR-KPNWVSFSHLI----------- 284
P + TYN + LCK++RT + L++ M + GG PN V+FS+L+
Sbjct: 348 PDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDI 407
Query: 285 ------HGYC----------------WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFL 322
C W+ ++ ++++++M++ G P+ Y H L
Sbjct: 408 VLERMAKNKCEMTSDLYNLMFRLYVQWDKE-EKVREIWSEMERSGLGPDQRTYTIRIHGL 466
Query: 323 CEGGDFESAFEITKESMDKGWVP 345
G A +E M KG VP
Sbjct: 467 HTKGKIGEALSYFQEMMSKGMVP 489
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 110/233 (47%), Gaps = 15/233 (6%)
Query: 84 QFLRDLPTS--RPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNAL 141
+F +D+ S RPD+ + + ++ G+ L A+ + M D + P VK N +
Sbjct: 268 RFWKDIIASKCRPDVVSYGTMINALTKKGK---LGKAMELYRAMWDTRR-NPDVKICNNV 323
Query: 142 LFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMD--R 199
+ A K E ++ + + P+V TYN+++K + T V+ ++ EM+
Sbjct: 324 IDALCFKKRIPEALEVFREISEK-GPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKG 382
Query: 200 NSVRPNAVTFSNAIEGFYSEKKFEEVGKVL-KMMEEKYGMSPALSTYNVRILSLCKLKRT 258
S PN VTFS ++ YS++ ++V VL +M + K M+ L YN+ + +
Sbjct: 383 GSCSPNDVTFSYLLK--YSQRS-KDVDIVLERMAKNKCEMTSDL--YNLMFRLYVQWDKE 437
Query: 259 SEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPE 311
+ + + M G P+ +++ IHG +G + EA F +M +G PE
Sbjct: 438 EKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPE 490
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/205 (19%), Positives = 82/205 (40%), Gaps = 2/205 (0%)
Query: 172 ETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKM 231
+TY ++ +A + + + + V F + K E +
Sbjct: 179 KTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCS 238
Query: 232 MEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEG 291
++G + N+ + C L EAK + +I+ +P+ VS+ +I+ +G
Sbjct: 239 RRREFGCD--IKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKG 296
Query: 292 NLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMK 351
L +A +++ M P+ + LC A E+ +E +KG PN T
Sbjct: 297 KLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYN 356
Query: 352 KLVTGLVGVSKTDDAKELIKQVKEK 376
L+ L + +T+ EL+++++ K
Sbjct: 357 SLLKHLCKIRRTEKVWELVEEMELK 381
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/401 (19%), Positives = 148/401 (36%), Gaps = 91/401 (22%)
Query: 8 SLRRYSTILSPNSSTPLTAKEKSRTALHLLKSETNPERILD---------IC----RAAS 54
SLRR + +S+ P+ K + L PE + D +C AS
Sbjct: 104 SLRRRISNRKKSSAKPILNVSKFHETISKLPPRFTPEELADAITLEEDPFLCFHLFNWAS 163
Query: 55 LTPDFHLDRIALSVAISKLKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARM 114
P F + + +AI KL + +D + + + R + NE + I + +A
Sbjct: 164 QQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVR-HIGNENLYNSIIFYFTKAGK 222
Query: 115 LPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETY 174
L AV F M V S KN +P + TY
Sbjct: 223 LIRAVNIFRHM---------VTS-------------------------KNLECRPTIRTY 248
Query: 175 NTVIKSFAESGSTS--------SVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVG 226
+ + K+ G+ S +V S+ +M + + P+ + ++G+ +
Sbjct: 249 HILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDAL 308
Query: 227 KVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHG 286
++ M Y C+ PN ++ +LIHG
Sbjct: 309 RIFHQMSVVYD---------------CE--------------------PNSFTYDYLIHG 333
Query: 287 YCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPN 346
C +G A+++ ++MK +G+ P Y +L + G+ + A + E ++ G V +
Sbjct: 334 LCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVD 393
Query: 347 FTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTESSDKWDEI 387
F + + LV K D+A L++ ++EK D +D++
Sbjct: 394 FISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDSYDKL 434
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 15/185 (8%)
Query: 139 NALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMD 198
N ++ A + E I+ + + +QPDV+TYN +I+ F+ G +Y +EM
Sbjct: 18 NIIIHGLCKAGKFDEAGNIFTNLLIS-GLQPDVQTYNMMIR-FSSLGRAEKLY---AEMI 72
Query: 199 RNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRT 258
R + P+ +T+++ I G + K + KV S + ST+N I CK R
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQARKV----------SKSCSTFNTLINGYCKATRV 122
Query: 259 SEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTL 318
+ L M G N ++++ LIHG+ G+ + A +F +M G S + +
Sbjct: 123 KDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDI 182
Query: 319 AHFLC 323
LC
Sbjct: 183 LPQLC 187
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 24/214 (11%)
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL 229
D YN +I ++G +I + + + ++P+ T++ I +F +G+
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI-------RFSSLGRAE 65
Query: 230 KMMEE--KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
K+ E + G+ P TYN I LCK + ++A+ + + +F+ LI+GY
Sbjct: 66 KLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCSTFNTLINGY 116
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
C + + +F +M +RG Y TL H + GDF +A +I +E + G +
Sbjct: 117 CKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSS 176
Query: 348 TTMKKLVTGLVGVSKTDDAKELIKQVKEKFTESS 381
T + ++ L KEL K V +SS
Sbjct: 177 ITFRDILPQLC------SRKELRKAVAMLLQKSS 204
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 125/316 (39%), Gaps = 40/316 (12%)
Query: 95 DLRNERFLSQSIVL-----YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAK 149
D++ ++ LS+ Y +AR + A+ AF +M +EF N +L ++
Sbjct: 153 DMKAKKLLSKETFALISRRYARARKVKEAIGAFHKM-EEFGFKMESSDFNRMLDTLSKSR 211
Query: 150 DYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTF 209
+ + +++ D K +PD+++Y +++ + + + V + EM P+ V +
Sbjct: 212 NVGDAQKVF-DKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAY 270
Query: 210 SNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMI 269
I KK+EE + ME++ P+ + I L K+ ++A +
Sbjct: 271 GIIINAHCKAKKYEEAIRFFNEMEQR-NCKPSPHIFCSLINGLGSEKKLNDALEFFERSK 329
Query: 270 SGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFL------- 322
S G +++ L+ YCW +++A K +M+ +G P + Y + H L
Sbjct: 330 SSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSK 389
Query: 323 -------------------------CEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGL 357
C + A +I E KG +P L+T L
Sbjct: 390 EAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITAL 449
Query: 358 VGVSKTDDAKELIKQV 373
+K D+A E ++
Sbjct: 450 CHENKLDEACEYFNEM 465
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 121/294 (41%), Gaps = 39/294 (13%)
Query: 111 QARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPD 170
++R + +A F +M+ + + P +KS LL + V + + K+ +PD
Sbjct: 209 KSRNVGDAQKVFDKMKKK-RFEPDIKSYTILLEGWGQELNLLRVDEVNREM-KDEGFEPD 266
Query: 171 VETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEE------ 224
V Y +I + ++ +EM++ + +P+ F + I G SEKK +
Sbjct: 267 VVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFE 326
Query: 225 -----------------VGKVL--KMMEEKY---------GMSPALSTYNVRILSLCKLK 256
VG + ME+ Y G+ P TY++ + L +++
Sbjct: 327 RSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQ 386
Query: 257 RTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYF 316
R+ EA + Q M +P ++ ++ +C + LD A K++ +MK +G P +
Sbjct: 387 RSKEAYEVYQTMSC---EPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFS 443
Query: 317 TLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELI 370
+L LC + A E E +D G P +L L+ + D +L+
Sbjct: 444 SLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLV 497
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 99/213 (46%), Gaps = 2/213 (0%)
Query: 164 NYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFE 223
++ +PD T +I ++ +G+ S+ R +AVTFS I + ++
Sbjct: 238 SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYD 297
Query: 224 EVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHL 283
+ + M+ G+ P L YN I S+ + KR +AK + + +I+ G PNW +++ L
Sbjct: 298 GCLNIYEEMK-ALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAAL 356
Query: 284 IHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMD-KG 342
+ Y D+A ++ +MK++G Y TL + + AFEI ++ + +
Sbjct: 357 VRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCET 416
Query: 343 WVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
P+ T L+T + +A+ + Q++E
Sbjct: 417 CDPDSWTFSSLITVYACSGRVSEAEAALLQMRE 449
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 16/216 (7%)
Query: 102 LSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALI-----AKDYKEVSR 156
++ I YG+A + A++ + R R E ++A+ F+ LI + +Y
Sbjct: 248 MAAMIDAYGRAGNVDMALSLYDRARTEKW------RIDAVTFSTLIRIYGVSGNYDGCLN 301
Query: 157 IYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGF 216
IY + K ++P++ YN +I S + I ++ N PN T++ + +
Sbjct: 302 IYEEM-KALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAY 360
Query: 217 YSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKR-TSEAKALLQGMISGGR-K 274
+ ++ + + M+EK G+S + YN +LS+C R EA + Q M +
Sbjct: 361 GRARYGDDALAIYREMKEK-GLSLTVILYNT-LLSMCADNRYVDEAFEIFQDMKNCETCD 418
Query: 275 PNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
P+ +FS LI Y G + EA+ M++ G++P
Sbjct: 419 PDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEP 454
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 82/207 (39%), Gaps = 1/207 (0%)
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL 229
+V YN +K F +S + EM ++P+ TF+ I + +
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWF 233
Query: 230 KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW 289
+ M +G P T I + + A +L + + + V+FS LI Y
Sbjct: 234 EKMS-SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGV 292
Query: 290 EGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTT 349
GN D ++ +MK G KP Y L + A I K+ + G+ PN++T
Sbjct: 293 SGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWST 352
Query: 350 MKKLVTGLVGVSKTDDAKELIKQVKEK 376
LV DDA + +++KEK
Sbjct: 353 YAALVRAYGRARYGDDALAIYREMKEK 379
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 8/185 (4%)
Query: 158 YLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFY 217
YL+ + P + Y V++ E G V S+L++M + V P+ V ++ ++G
Sbjct: 238 YLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVI 297
Query: 218 SEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNW 277
+++ + + K+ + G++P + TYNV I LCK A ++ M G +PN
Sbjct: 298 ADEDYPKADKLFDELLLL-GLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNV 356
Query: 278 VSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPES-------PCYFTLAHFLCEGGDFES 330
V+++ LI G+L AK ++ +M+ G S Y + +C G E
Sbjct: 357 VTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEE 416
Query: 331 AFEIT 335
AF +
Sbjct: 417 AFNMN 421
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 154/382 (40%), Gaps = 18/382 (4%)
Query: 4 RLRHSLRRYSTILSPNSSTPLTAKEKSRTALHLLKSE--TNPERILDICRAASLTPDFHL 61
R+ + +R+Y I + T K + A+ L+S T+ E + +L F L
Sbjct: 9 RMSNFMRKYRKIPHSSFKTKWNENLKQKYAMEELRSNLLTDSE---NASVMRTLLSSFQL 65
Query: 62 DRI-----ALSVAISKLKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLP 116
A I L + I L L S E I YG + +
Sbjct: 66 HNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIE 125
Query: 117 NAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNT 176
A+ F ++ + F+ PS +LNALL + + E+ L ++ + T+
Sbjct: 126 EAIEVFFKIPN-FRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGI 184
Query: 177 VIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKK---FEEVGKVLKMME 233
+I + G ++ M ++SV + +S + K F+ +G + + +
Sbjct: 185 LIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRK 244
Query: 234 EKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNL 293
++ SP L Y V + L + R E ++L M +P+ V ++ ++ G + +
Sbjct: 245 TRF--SPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDY 302
Query: 294 DEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDK-GWVPNFTTMKK 352
+A K+F ++ G P+ Y + LC+ D E A ++ SM+K G PN T
Sbjct: 303 PKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMS-SMNKLGSEPNVVTYNI 361
Query: 353 LVTGLVGVSKTDDAKELIKQVK 374
L+ LV AK L K+++
Sbjct: 362 LIKALVKAGDLSRAKTLWKEME 383
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 117/283 (41%), Gaps = 18/283 (6%)
Query: 106 IVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFP--- 162
IV+ G+ + A F M +E + +N ++ AL++ Y R F
Sbjct: 157 IVMLGKCKQPEKAHELFQEMINEGCV------VNHEVYTALVSA-YSRSGRFDAAFTLLE 209
Query: 163 ---KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSE 219
+++ QPDV TY+ +IKSF + + V +LS+M R +RPN +T++ I+ +
Sbjct: 210 RMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKA 269
Query: 220 KKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVS 279
K F E+ L M + P T N + + + + + S G +PN +
Sbjct: 270 KMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRT 329
Query: 280 FSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESM 339
F+ L+ Y GN + V M+K Y Y + GD + + +
Sbjct: 330 FNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQ 389
Query: 340 DKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTESSD 382
+ P+ T+ LV SK D ++ +F E+SD
Sbjct: 390 SERIFPSCVTLCSLVRAYGRASKADKIGGVL-----RFIENSD 427
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 115/264 (43%), Gaps = 9/264 (3%)
Query: 57 PDFHLDRIALSVAISKLKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIV-LYGQARML 115
PD H S+ I F + L D+ R +R +++ YG+A+M
Sbjct: 219 PDVH----TYSILIKSFLQVFAFDKVQDLLSDM--RRQGIRPNTITYNTLIDAYGKAKMF 272
Query: 116 PNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYN 175
+ +M E P ++N+ L A + + Y F ++ I+P++ T+N
Sbjct: 273 VEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKF-QSSGIEPNIRTFN 331
Query: 176 TVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEK 235
++ S+ +SG+ + +++ M + VT++ I+ F +++ + ++M+ +
Sbjct: 332 ILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSE 391
Query: 236 YGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDE 295
+ P+ T + + + + + +L+ + + + + V F+ L+ Y E
Sbjct: 392 R-IFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAE 450
Query: 296 AKKVFADMKKRGYKPESPCYFTLA 319
K V M+K+G+KP+ Y T+
Sbjct: 451 MKGVLELMEKKGFKPDKITYRTMV 474
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 103/242 (42%), Gaps = 7/242 (2%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
PS+ S LL A + K Y +S I + ++ + D +N VI +F+ESG+
Sbjct: 78 PSLISYTTLLAAMTVQKQYGSISSIVSEVEQS-GTKLDSIFFNAVINAFSESGNMEDAVQ 136
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMM--EEKYGMSPALSTYNVRIL 250
L +M + P T++ I+G+ K E ++L +M E + P + T+NV +
Sbjct: 137 ALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQ 196
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFAD---MKKRG 307
+ CK K+ EA +++ M G +P+ V+++ + Y +G A+ + MK++
Sbjct: 197 AWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKA 256
Query: 308 YKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAK 367
C + + C G + + N L+ G V V D
Sbjct: 257 KPNGRTCGIVVGGY-CREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGID 315
Query: 368 EL 369
E+
Sbjct: 316 EV 317
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 105/218 (48%), Gaps = 16/218 (7%)
Query: 130 QITPSVKSLNALLFAALI-----AKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAES 184
++ S L+++ F A+I + + ++ + L K + P TYNT+IK + +
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKM-KELGLNPTTSTYNTLIKGYGIA 163
Query: 185 GS---TSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPA 241
G +S + ++ E V PN TF+ ++ + +KK EE +V+K MEE G+ P
Sbjct: 164 GKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEE-CGVRPD 222
Query: 242 LSTYNVRILSLCKLKRTSEAKA---LLQGMISGGR-KPNWVSFSHLIHGYCWEGNLDEAK 297
TYN ++ C +++ +A +++ M+ + KPN + ++ GYC EG + +
Sbjct: 223 TVTYNT--IATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGL 280
Query: 298 KVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEIT 335
+ MK+ + + +L + E D + E+T
Sbjct: 281 RFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVT 318
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 115/264 (43%), Gaps = 20/264 (7%)
Query: 124 RMRDEFQITPSVKSL----NALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIK 179
R+RD + +K + N ++F +LI + + R +D +V T ++
Sbjct: 275 RVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGID---------EV-TLTLLLM 324
Query: 180 SFAES----GSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEK 235
SF E G+ +L+ M +V+ + +T+S + + S E+ +V K M K
Sbjct: 325 SFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMV-K 383
Query: 236 YGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDE 295
G+ P Y++ + K +A+ LL+ +I R PN V F+ +I G+C G++D+
Sbjct: 384 AGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR-PNVVIFTTVISGWCSNGSMDD 442
Query: 296 AKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVT 355
A +VF M K G P + TL E A E+ + G P +T L
Sbjct: 443 AMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAE 502
Query: 356 GLVGVSKTDDAKELIKQVKEKFTE 379
TD++ + I +K K E
Sbjct: 503 AWRVAGLTDESNKAINALKCKDIE 526
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 73/155 (47%), Gaps = 4/155 (2%)
Query: 224 EVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHL 283
E V K + E G P+L +Y + ++ K+ +++ + G K + + F+ +
Sbjct: 63 EAQTVFKTLAET-GHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAV 121
Query: 284 IHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGW 343
I+ + GN+++A + MK+ G P + Y TL G E + E+ +++G
Sbjct: 122 INAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGN 181
Query: 344 V---PNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
V PN T LV K ++A E++K+++E
Sbjct: 182 VDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEE 216
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 112/229 (48%), Gaps = 2/229 (0%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
YG+A M + M ++ P V +LN+++ + ++ +++ Y F + +Q
Sbjct: 260 YGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRF-QLMGVQ 318
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
PD+ T+N +I SF ++G + S++ M++ VT++ IE F + E++ V
Sbjct: 319 PDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDV 378
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
+ M+ + G+ P TY + + K + ++L+ +++ + F+ +I+ Y
Sbjct: 379 FRKMKYQ-GVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYG 437
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKE 337
G+L K+++ M++R KP+ + T+ G F++ E+ K+
Sbjct: 438 QAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQ 486
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 127/295 (43%), Gaps = 6/295 (2%)
Query: 79 FSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSL 138
FST+ ++++ + +PD+ L G+ ++ + V + + + S +
Sbjct: 199 FSTL-EYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYL----GVGCSTVTY 253
Query: 139 NALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMD 198
N ++ A ++E+ + D ++ PDV T N++I S+ + + S S
Sbjct: 254 NTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQ 313
Query: 199 RNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRT 258
V+P+ TF+ I F ++++ V+ ME+++ S TYN+ I + K R
Sbjct: 314 LMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRF-FSLTTVTYNIVIETFGKAGRI 372
Query: 259 SEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTL 318
+ + + M G KPN +++ L++ Y G + + V + ++P + +
Sbjct: 373 EKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCI 432
Query: 319 AHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
+ + GD + E+ + ++ P+ T ++ D +EL KQ+
Sbjct: 433 INAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQM 487
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 1/159 (0%)
Query: 173 TYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMM 232
Y ++ E G +LSEM+ + V P TF+ I GF + +EE G +
Sbjct: 341 VYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGF-ARFGWEEKGLEYCEV 399
Query: 233 EEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGN 292
G+ P+ S +N + S+ K++ + A +L I G P+ ++SHLI G+ +
Sbjct: 400 MVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGND 459
Query: 293 LDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESA 331
+D+A K+F +M+ R P + +L LC G E+
Sbjct: 460 IDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAG 498
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 115/279 (41%), Gaps = 26/279 (9%)
Query: 113 RMLPNAVTAFT---RMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQP 169
R LP+ + + R+ +E +I S+ L LL ++
Sbjct: 264 RCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVV--------------------- 302
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL 229
D Y+ V+ + A+ G S + EM + N+ ++ + + +E ++L
Sbjct: 303 DTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLL 362
Query: 230 KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW 289
MEE G+SP T+N I + + + M++ G P+ +F+ ++
Sbjct: 363 SEMEES-GVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSK 421
Query: 290 EGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTT 349
N++ A ++ +G+ P+ Y L EG D + A ++ E + P F
Sbjct: 422 IENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEV 481
Query: 350 MKKLVTGLVGVSKTDDAKELIKQVKEKFTE-SSDKWDEI 387
+ L+ GL K + ++ +K +K++ E ++D +D +
Sbjct: 482 FRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDAL 520
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 83/187 (44%), Gaps = 1/187 (0%)
Query: 171 VETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLK 230
V T NT+I ++S V+ I + PN +T I+ E + +EV +L
Sbjct: 199 VITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLD 258
Query: 231 MMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWE 290
+ K + P++ + + + R E+ +LL+ ++ + + +S +++ E
Sbjct: 259 RICGKRCL-PSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKE 317
Query: 291 GNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTM 350
G+L A+KVF +M +RG+ S Y CE GD + A + E + G P T
Sbjct: 318 GDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETF 377
Query: 351 KKLVTGL 357
L+ G
Sbjct: 378 NCLIGGF 384
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 18/223 (8%)
Query: 176 TVIKSFAESGSTSSVYSILSEMDR---NSVRPNAVTFSNAIEG-------------FYSE 219
+VI E G VY+ L+ +DR N P A+ F + + G
Sbjct: 304 SVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCY 363
Query: 220 KKFEEVGKVLKMMEEKYGMSPALS--TYNVRILSLCKLKRTSEAKALLQGMISGGRKPNW 277
K + + L+ +E M+ L YNV +L KL R EA LLQ M G P+
Sbjct: 364 CKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDV 423
Query: 278 VSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKE 337
++++ LI GYC +G + +A + +M G P+ Y L L G E EI +
Sbjct: 424 INYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYER 483
Query: 338 SMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTES 380
+G PN T ++ GL K +A++ +++K E+
Sbjct: 484 MKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPEN 526
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 100/265 (37%), Gaps = 58/265 (21%)
Query: 172 ETYNTVIKSFAESGSTSSVYSILSEMD---RNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
E + +K + E+G + Y ++ R SV + FS IEG+ E+ V
Sbjct: 525 ENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIK-LFFSLCIEGY-----LEKAHDV 578
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
LK M Y + P S I + CKL EA+ L M+ G P+ +++ +IH YC
Sbjct: 579 LKKMS-AYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYC 637
Query: 289 WEGNLDEAKKVFADMKKRGYKPESP----------------------------------- 313
L +A+ +F DMK+RG KP+
Sbjct: 638 RLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVL 697
Query: 314 -------------CYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGV 360
CY L C+ + E A E+ +D G P+ L++
Sbjct: 698 REFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRK 757
Query: 361 SKTDDAKELIKQVKEKFTESSDKWD 385
D A L+ ++ +K+ S+ ++
Sbjct: 758 GYIDMAVTLVTELSKKYNIPSESFE 782
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 85/216 (39%), Gaps = 27/216 (12%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
+ PD+ TYN ++ A +G V I M +PNAVT S IEG +K +E
Sbjct: 453 GMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEA 512
Query: 226 GKVLKMMEEKY--------------GMSPALSTYNVRI-------------LSLCKLKRT 258
+E+K G+S VR+ SLC
Sbjct: 513 EDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYL 572
Query: 259 SEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTL 318
+A +L+ M + +P +I +C N+ EA+ +F M +RG P+ Y +
Sbjct: 573 EKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIM 632
Query: 319 AHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
H C + + A + ++ +G P+ T L+
Sbjct: 633 IHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLL 668
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 10/215 (4%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
K+ I PDV Y T+I + G ++ EM N + P+ +T++ + G
Sbjct: 415 KDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHE 474
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKP-NWVSFS 281
EEV ++ + M+ + G P T +V I LC ++ EA+ + + P N SF
Sbjct: 475 EEVLEIYERMKAE-GPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQ--KCPENKASF- 530
Query: 282 HLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDK 341
+ GYC G +A K F ++ Y Y L LC G E A ++ K+
Sbjct: 531 --VKGYCEAGLSKKAYKAFVRLE---YPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAY 585
Query: 342 GWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
P + K++ ++ +A+ L + E+
Sbjct: 586 RVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVER 620
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/198 (19%), Positives = 83/198 (41%), Gaps = 21/198 (10%)
Query: 129 FQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTS 188
+++ P +S+ + A + +++ D + PD+ TY +I ++
Sbjct: 585 YRVEPG-RSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQ 643
Query: 189 SVYSILSEMDRNSVRPNAVTFS----------------NAIEGFYSEKKFEEVGKVLKMM 232
S+ +M + ++P+ VT++ +++G ++K EV +
Sbjct: 644 KAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFS-- 701
Query: 233 EEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGN 292
G+ + Y V I CK+ +A L MI G +P+ V+++ LI Y +G
Sbjct: 702 --AAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGY 759
Query: 293 LDEAKKVFADMKKRGYKP 310
+D A + ++ K+ P
Sbjct: 760 IDMAVTLVTELSKKYNIP 777
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 4/214 (1%)
Query: 130 QITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSS 189
ITP+ + N + A +E + K + +P V +Y T+I+ + +
Sbjct: 219 HITPNAHTFNIFIHGWCKANRVEEALWTIQEM-KGHGFRPCVISYTTIIRCYCQQFEFIK 277
Query: 190 VYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRI 249
VY +LSEM+ N PN++T++ + ++K+FEE +V M ++ G P YN I
Sbjct: 278 VYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM-KRSGCKPDSLFYNCLI 336
Query: 250 LSLCKLKRTSEAKALLQ-GMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGY 308
+L + R EA+ + + M G N +++ +I YC D+A ++ +M+
Sbjct: 337 HTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNL 396
Query: 309 -KPESPCYFTLAHFLCEGGDFESAFEITKESMDK 341
P+ Y L + GD ++ KE + K
Sbjct: 397 CNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTK 430
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 88/202 (43%), Gaps = 5/202 (2%)
Query: 173 TYNTV---IKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL 229
T NTV ++ FA +G I + + N + + ++ EK+ E+ VL
Sbjct: 154 TLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL 213
Query: 230 KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW 289
++ K ++P T+N+ I CK R EA +Q M G +P +S++ +I YC
Sbjct: 214 --LQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ 271
Query: 290 EGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTT 349
+ + ++ ++M+ G P S Y T+ L +FE A + G P+
Sbjct: 272 QFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLF 331
Query: 350 MKKLVTGLVGVSKTDDAKELIK 371
L+ L + ++A+ + +
Sbjct: 332 YNCLIHTLARAGRLEEAERVFR 353
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 2/167 (1%)
Query: 208 TFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQG 267
T + + F ++EE + + E +G+ + N+ + +LCK KR +A+ +L
Sbjct: 157 TVAKIMRRFAGAGEWEEAVGIFDRLGE-FGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ 215
Query: 268 MISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGD 327
+ S PN +F+ IHG+C ++EA +MK G++P Y T+ C+ +
Sbjct: 216 LKSHI-TPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFE 274
Query: 328 FESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVK 374
F +E+ E G PN T +++ L + ++A + ++K
Sbjct: 275 FIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMK 321
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 67/160 (41%), Gaps = 4/160 (2%)
Query: 118 AVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIY-LDFPKNYSIQPDVETYNT 176
A+ TRM+ P N L+ A +E R++ ++ P+ + + TYN+
Sbjct: 313 ALRVATRMKRS-GCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPE-LGVSINTSTYNS 370
Query: 177 VIKSFAESGSTSSVYSILSEMDR-NSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEK 235
+I + +L EM+ N P+ T+ + + EVGK+LK M K
Sbjct: 371 MIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTK 430
Query: 236 YGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKP 275
+ +S STY I LC+ A L + MIS P
Sbjct: 431 HHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITP 470
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 4/214 (1%)
Query: 130 QITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSS 189
ITP+ + N + A +E + K + +P V +Y T+I+ + +
Sbjct: 219 HITPNAHTFNIFIHGWCKANRVEEALWTIQEM-KGHGFRPCVISYTTIIRCYCQQFEFIK 277
Query: 190 VYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRI 249
VY +LSEM+ N PN++T++ + ++K+FEE +V M ++ G P YN I
Sbjct: 278 VYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM-KRSGCKPDSLFYNCLI 336
Query: 250 LSLCKLKRTSEAKALLQ-GMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGY 308
+L + R EA+ + + M G N +++ +I YC D+A ++ +M+
Sbjct: 337 HTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNL 396
Query: 309 -KPESPCYFTLAHFLCEGGDFESAFEITKESMDK 341
P+ Y L + GD ++ KE + K
Sbjct: 397 CNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTK 430
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 88/202 (43%), Gaps = 5/202 (2%)
Query: 173 TYNTV---IKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL 229
T NTV ++ FA +G I + + N + + ++ EK+ E+ VL
Sbjct: 154 TLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL 213
Query: 230 KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW 289
++ K ++P T+N+ I CK R EA +Q M G +P +S++ +I YC
Sbjct: 214 --LQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ 271
Query: 290 EGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTT 349
+ + ++ ++M+ G P S Y T+ L +FE A + G P+
Sbjct: 272 QFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLF 331
Query: 350 MKKLVTGLVGVSKTDDAKELIK 371
L+ L + ++A+ + +
Sbjct: 332 YNCLIHTLARAGRLEEAERVFR 353
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 2/167 (1%)
Query: 208 TFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQG 267
T + + F ++EE + + E +G+ + N+ + +LCK KR +A+ +L
Sbjct: 157 TVAKIMRRFAGAGEWEEAVGIFDRLGE-FGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ 215
Query: 268 MISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGD 327
+ S PN +F+ IHG+C ++EA +MK G++P Y T+ C+ +
Sbjct: 216 LKSHI-TPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFE 274
Query: 328 FESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVK 374
F +E+ E G PN T +++ L + ++A + ++K
Sbjct: 275 FIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMK 321
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 67/160 (41%), Gaps = 4/160 (2%)
Query: 118 AVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIY-LDFPKNYSIQPDVETYNT 176
A+ TRM+ P N L+ A +E R++ ++ P+ + + TYN+
Sbjct: 313 ALRVATRMKRS-GCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPE-LGVSINTSTYNS 370
Query: 177 VIKSFAESGSTSSVYSILSEMDR-NSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEK 235
+I + +L EM+ N P+ T+ + + EVGK+LK M K
Sbjct: 371 MIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTK 430
Query: 236 YGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKP 275
+ +S STY I LC+ A L + MIS P
Sbjct: 431 HHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITP 470
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 114/251 (45%), Gaps = 7/251 (2%)
Query: 130 QITPSVKSLNALLFAALI--AKDYKEVSRIYLDFP--KNYSIQPDVETYNTVIKSFAESG 185
Q++ S N F ALI +V++ + + ++ +++PD +N +I + +SG
Sbjct: 527 QMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSG 586
Query: 186 STSSVYSILSEM--DRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALS 243
+ + +L+EM + + + P+ ++ ++ + + E +V +M+ KYG+
Sbjct: 587 AVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIH-KYGIRGTPE 645
Query: 244 TYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADM 303
Y + + S K A ++ + M P+ V FS LI LDEA + D
Sbjct: 646 VYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDA 705
Query: 304 KKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKT 363
K +G + + Y +L C D++ A E+ ++ P +TM L+T L ++
Sbjct: 706 KSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQL 765
Query: 364 DDAKELIKQVK 374
A E + ++K
Sbjct: 766 PKAMEYLDEIK 776
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 104/249 (41%), Gaps = 4/249 (1%)
Query: 110 GQARMLPNAVTAFTRMRDEFQ-ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
GQ+ + A M+ E I P S+ AL+ A A + +Y K Y I+
Sbjct: 583 GQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHK-YGIR 641
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
E Y + S ++SG SI +M V P+ V FS I+ K +E +
Sbjct: 642 GTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGI 701
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
L+ + + G+ +Y+ + + C K +A L + + S +P + + LI C
Sbjct: 702 LQDAKSQ-GIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALC 760
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
L +A + ++K G KP + Y L DFE +F++ ++ G PN
Sbjct: 761 EGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNL- 819
Query: 349 TMKKLVTGL 357
M + +T L
Sbjct: 820 IMCRCITSL 828
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 108/249 (43%), Gaps = 6/249 (2%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
+ P++ + N L+ ++D E +R L + + D + Y T+I S A+SG ++
Sbjct: 463 LNPTMSTFNMLMSVCASSQDI-EGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAM 521
Query: 191 YSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRIL 250
+ + +M + V N TF I+G + + ++ K + P +N I
Sbjct: 522 FEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSK-NVKPDRVVFNALIS 580
Query: 251 SLCKLKRTSEAKALLQGMISGGR--KPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGY 308
+ + A +L M + P+ +S L+ C G ++ AK+V+ + K G
Sbjct: 581 ACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGI 640
Query: 309 KPESPCYFTLAHFLC-EGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAK 367
+ +P +T+A C + GD++ A I K+ +K P+ L+ D+A
Sbjct: 641 RG-TPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAF 699
Query: 368 ELIKQVKEK 376
+++ K +
Sbjct: 700 GILQDAKSQ 708
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 1/201 (0%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P + + +I+ A++ VY + +M + +P ++ ++ F+ V
Sbjct: 191 PSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAV 250
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
+ +E G+ +T+ + + LCK R E +LQ M KP+ +++ +I
Sbjct: 251 YEDFKED-GLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLV 309
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
EGNLD + +V+ +M++ KP+ Y TL LC+ G E +E+ E K + +
Sbjct: 310 SEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDRE 369
Query: 349 TMKKLVTGLVGVSKTDDAKEL 369
+ L+ G V K A L
Sbjct: 370 IYRVLIEGFVADGKVRSACNL 390
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 133/311 (42%), Gaps = 6/311 (1%)
Query: 73 LKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQIT 132
L HF DQ L +L S+ +E+ I ++ R + +M+ +F
Sbjct: 168 LNRNGHFRAADQ-LPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMK-KFGFK 225
Query: 133 PSVKSLNALLFAALIAKDYKEVS-RIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVY 191
P V N ++ AL+ Y +++ +Y DF ++ ++ + T+ ++K ++G +
Sbjct: 226 PRVFLYNRIM-DALVKNGYFDLALAVYEDFKEDGLVE-ESTTFMILVKGLCKAGRIEEML 283
Query: 192 SILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILS 251
IL M N +P+ ++ I+ SE + +V M + P + Y ++
Sbjct: 284 EILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRD-EIKPDVMAYGTLVVG 342
Query: 252 LCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPE 311
LCK R L M + + LI G+ +G + A ++ D+ GY +
Sbjct: 343 LCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIAD 402
Query: 312 SPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIK 371
Y + LC + A+++ + ++++ P+F T+ ++ V +++ D +++
Sbjct: 403 IGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLE 462
Query: 372 QVKEKFTESSD 382
++ E SD
Sbjct: 463 RIGELGYPVSD 473
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 82/204 (40%), Gaps = 4/204 (1%)
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL 229
D+ YN VIK Y + + P+ T S + + + + VL
Sbjct: 402 DIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVL 461
Query: 230 KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW 289
+ + E + +S Y + L A AL I + VS +++ +
Sbjct: 462 ERIGE---LGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALY 518
Query: 290 E-GNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
+ G++ ++ +F +M+K G++P+S Y E GD ++A ++ ++ VP+
Sbjct: 519 KMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIA 578
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQ 372
L GL + + D L+++
Sbjct: 579 AYLSLTKGLCQIGEIDAVMLLVRE 602
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 8/160 (5%)
Query: 221 KFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSF 280
+F+E ++ K M G P TY+ + LCK KR EA+ +L M + G P+ ++
Sbjct: 385 RFDEAEEITKAMRNA-GYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTW 443
Query: 281 SHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESA----FEITK 336
+ LI G+C LD+A FA+M ++G+ +S L FE A E+ K
Sbjct: 444 TILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVK 503
Query: 337 ESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+ K W +T K L+ L+ + K+++A +L++ +K++
Sbjct: 504 NANVKPWQ---STYKLLIDKLLKIKKSEEALDLLQMMKKQ 540
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 8/195 (4%)
Query: 133 PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYS 192
P + + L+F AK +E +R LD + PD++T+ +I+ ++ +
Sbjct: 403 PDNITYSQLVFGLCKAKRLEE-ARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALA 461
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
+ M ++ I+GF KFE L M + + P STY + I L
Sbjct: 462 CFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKL 521
Query: 253 CKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWE-GNLDEAKKVFADMKKRGYKPE 311
K+K++ EA LLQ M +K N+ +++ GY + G L++AKK F D+ P
Sbjct: 522 LKIKKSEEALDLLQMM----KKQNYPAYAEAFDGYLAKFGTLEDAKK-FLDVLSSKDSPS 576
Query: 312 SPCYF-TLAHFLCEG 325
YF + F EG
Sbjct: 577 FAAYFHVIEAFYREG 591
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 100/256 (39%), Gaps = 40/256 (15%)
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
Q TYN ++ A S + +S++ EM + T+ F + E K
Sbjct: 260 QHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVK 319
Query: 228 VLKMMEE---------------------------------KY---GMSPALSTYNVRILS 251
+ + M + KY G S + + Y+ S
Sbjct: 320 LYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRS 379
Query: 252 LCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPE 311
L + R EA+ + + M + G +P+ +++S L+ G C L+EA+ V M+ +G P+
Sbjct: 380 LTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPD 439
Query: 312 SPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAK---- 367
+ L C+ + + A ++KG+ + + L+ G V +K + A
Sbjct: 440 IKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLM 499
Query: 368 ELIKQVKEKFTESSDK 383
E++K K +S+ K
Sbjct: 500 EMVKNANVKPWQSTYK 515
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 104/226 (46%), Gaps = 7/226 (3%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
YG L AV F +M + I P+V S+ LL A +K V + L ++ I
Sbjct: 435 YGSNGFLAEAVEIFRQMEQD-GIKPNVVSVCTLLAACSRSKKKVNVDTV-LSAAQSRGIN 492
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
+ YN+ I S+ + ++ M + V+ ++VTF+ I G K+ E
Sbjct: 493 LNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISY 552
Query: 229 LKMMEEKYGMSPALS--TYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHG 286
LK ME+ +S L+ Y+ + + K + +EA+++ M G +P+ ++++ ++H
Sbjct: 553 LKEMED---LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHA 609
Query: 287 YCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAF 332
Y +A ++F +M+ G +P+S L +GG + F
Sbjct: 610 YNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVF 655
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 101/215 (46%), Gaps = 3/215 (1%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
+ +S +PD ETY+ +I + +G +++ +M R ++ P+ T++N I S +
Sbjct: 170 QKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNW 229
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
E +V K M + G+ P L T+N+ + + ++ S+A + + M +P+ +F+
Sbjct: 230 REALEVCKKMTDN-GVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNI 288
Query: 283 LIHGYCWEGNLDEAKKVFADM--KKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMD 340
+I+ G +A +F M K+ +P+ + ++ H G+ E+ + + +
Sbjct: 289 IIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVA 348
Query: 341 KGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
+G PN + L+ + A ++ +K+
Sbjct: 349 EGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 383
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 108/230 (46%), Gaps = 14/230 (6%)
Query: 94 PDLRNERFLSQSIVL--YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFA-ALIAKD 150
PDL ++ +IVL Y R A++ F M+ ++ P + N +++ + + +
Sbjct: 246 PDL-----VTHNIVLSAYKSGRQYSKALSYFELMKGA-KVRPDTTTFNIIIYCLSKLGQS 299
Query: 151 YKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFS 210
+ + K +PDV T+ +++ ++ G + ++ M ++PN V++
Sbjct: 300 SQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY- 358
Query: 211 NAIEGFYSEKKFEEVGKVLKMMEE--KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGM 268
NA+ G Y+ G L ++ + + G+ P + +Y + S + ++ +AK + M
Sbjct: 359 NALMGAYAVHGMS--GTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMM 416
Query: 269 ISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTL 318
RKPN V+++ LI Y G L EA ++F M++ G KP TL
Sbjct: 417 RKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTL 466
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 114/294 (38%), Gaps = 39/294 (13%)
Query: 120 TAFTRMRDEFQ--ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTV 177
TA + + D Q I P V S LL + ++ + ++L K +P+V TYN +
Sbjct: 373 TALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR-KPNVVTYNAL 431
Query: 178 IKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYG 237
I ++ +G + I +M+++ ++PN V+ + KK V VL + + G
Sbjct: 432 IDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSR-G 490
Query: 238 MSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW-------- 289
++ + YN I S +A AL Q M K + V+F+ LI G C
Sbjct: 491 INLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAI 550
Query: 290 ---------------------------EGNLDEAKKVFADMKKRGYKPESPCYFTLAHFL 322
+G + EA+ +F MK G +P+ Y ++ H
Sbjct: 551 SYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAY 610
Query: 323 CEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+ A E+ E G P+ L+ + + L+ ++EK
Sbjct: 611 NASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREK 664
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 104/226 (46%), Gaps = 7/226 (3%)
Query: 109 YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQ 168
YG L AV F +M + I P+V S+ LL A +K V + L ++ I
Sbjct: 303 YGSNGFLAEAVEIFRQMEQD-GIKPNVVSVCTLLAACSRSKKKVNVDTV-LSAAQSRGIN 360
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
+ YN+ I S+ + ++ M + V+ ++VTF+ I G K+ E
Sbjct: 361 LNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISY 420
Query: 229 LKMMEEKYGMSPALS--TYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHG 286
LK ME+ +S L+ Y+ + + K + +EA+++ M G +P+ ++++ ++H
Sbjct: 421 LKEMED---LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHA 477
Query: 287 YCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAF 332
Y +A ++F +M+ G +P+S L +GG + F
Sbjct: 478 YNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVF 523
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 101/215 (46%), Gaps = 3/215 (1%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
+ +S +PD ETY+ +I + +G +++ +M R ++ P+ T++N I S +
Sbjct: 38 QKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNW 97
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
E +V K M + G+ P L T+N+ + + ++ S+A + + M +P+ +F+
Sbjct: 98 REALEVCKKMTDN-GVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNI 156
Query: 283 LIHGYCWEGNLDEAKKVFADM--KKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMD 340
+I+ G +A +F M K+ +P+ + ++ H G+ E+ + + +
Sbjct: 157 IIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVA 216
Query: 341 KGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
+G PN + L+ + A ++ +K+
Sbjct: 217 EGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 251
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 108/230 (46%), Gaps = 14/230 (6%)
Query: 94 PDLRNERFLSQSIVL--YGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFA-ALIAKD 150
PDL ++ +IVL Y R A++ F M+ ++ P + N +++ + + +
Sbjct: 114 PDL-----VTHNIVLSAYKSGRQYSKALSYFELMKGA-KVRPDTTTFNIIIYCLSKLGQS 167
Query: 151 YKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFS 210
+ + K +PDV T+ +++ ++ G + ++ M ++PN V++
Sbjct: 168 SQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY- 226
Query: 211 NAIEGFYSEKKFEEVGKVLKMMEE--KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGM 268
NA+ G Y+ G L ++ + + G+ P + +Y + S + ++ +AK + M
Sbjct: 227 NALMGAYAVHGMS--GTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMM 284
Query: 269 ISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTL 318
RKPN V+++ LI Y G L EA ++F M++ G KP TL
Sbjct: 285 RKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTL 334
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 114/294 (38%), Gaps = 39/294 (13%)
Query: 120 TAFTRMRDEFQ--ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTV 177
TA + + D Q I P V S LL + ++ + ++L K +P+V TYN +
Sbjct: 241 TALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR-KPNVVTYNAL 299
Query: 178 IKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYG 237
I ++ +G + I +M+++ ++PN V+ + KK V VL + + G
Sbjct: 300 IDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSR-G 358
Query: 238 MSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW-------- 289
++ + YN I S +A AL Q M K + V+F+ LI G C
Sbjct: 359 INLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAI 418
Query: 290 ---------------------------EGNLDEAKKVFADMKKRGYKPESPCYFTLAHFL 322
+G + EA+ +F MK G +P+ Y ++ H
Sbjct: 419 SYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAY 478
Query: 323 CEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
+ A E+ E G P+ L+ + + L+ ++EK
Sbjct: 479 NASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREK 532
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
+ EM + + N VT++ I+G + + ++ K M G+ P + TYN+ + L
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSD-GVPPDIMTYNILLDGL 61
Query: 253 CKLKRTSEAKALLQGMISGG-----------RKPNWVSFSHLIHGYCWEGNLDEAKKVFA 301
CK + KAL+ G + G KPN V+++ +I G+C +G +EA +F
Sbjct: 62 CKNGKLE--KALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFR 119
Query: 302 DMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKE 337
MK+ G P+S Y TL GD ++ E+ KE
Sbjct: 120 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKE 155
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 16/165 (9%)
Query: 173 TYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV---GKVL 229
TY T+I+ ++G I EM + V P+ +T++ ++G K E+ GKV
Sbjct: 18 TYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKV- 76
Query: 230 KMMEEKY---------GMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSF 280
E+ + G+ P + TY I CK EA L + M G P+ ++
Sbjct: 77 ---EDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTY 133
Query: 281 SHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEG 325
+ LI + +G+ + ++ +M+ + ++ Y + L +G
Sbjct: 134 NTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDG 178
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 117/298 (39%), Gaps = 39/298 (13%)
Query: 106 IVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALL--FAALIAKDYKEVSRIYLDFPK 163
I+ YG+ + A+ F M+D + PS + L+ ++ +E +R + + +
Sbjct: 720 IMQYGRTGLTNIAIRTFKEMKD-MGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIR 778
Query: 164 NYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFE 223
+ + PD E + E G+T S L + + P V +S I K E
Sbjct: 779 SGFV-PDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLE 836
Query: 224 EV-----------------------------GKVLKMMEE-----KYGMSPALSTYNVRI 249
E G + K +++ + G P + Y I
Sbjct: 837 EALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLI 896
Query: 250 LSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYK 309
+ K K+ + Q M +P+ V+++ +I GY G ++EA F +M++RG
Sbjct: 897 VYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTS 956
Query: 310 PESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAK 367
P+ Y + LC+ E A ++ E +DKG P+ + + GL K D A+
Sbjct: 957 PDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLAR 1014
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 6/174 (3%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
KN + D + + ++K + I+ M R + + V + I G+ +
Sbjct: 356 KNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV-YGIIISGYLRQN-- 412
Query: 223 EEVGKVLKMME--EKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSF 280
+V K L+ E +K G P +STY + L KLK+ + L MI G +P+ V+
Sbjct: 413 -DVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAI 471
Query: 281 SHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEI 334
+ ++ G+ + + EA KVF+ M+++G KP Y LC ++ +I
Sbjct: 472 TAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKI 525
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 94/219 (42%), Gaps = 5/219 (2%)
Query: 171 VETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLK 230
V YNT++ E+ + V ++SEM++N + T++ I + KK +GK L
Sbjct: 189 VGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKK---IGKGLL 245
Query: 231 MMEE--KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
+ E+ K G + YN+ I SLC R A + M+ G ++ L+
Sbjct: 246 VFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIA 305
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
+D + + DM + E + L C G + A E+ +E +K +
Sbjct: 306 KSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAK 365
Query: 349 TMKKLVTGLVGVSKTDDAKELIKQVKEKFTESSDKWDEI 387
+ LV GL ++ DA E++ +K + + S+ + I
Sbjct: 366 YFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGII 404
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 97/209 (46%), Gaps = 13/209 (6%)
Query: 140 ALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAE-------SGSTSSVYS 192
+LLF + ++ KE R+ D K+ I PD+ +N+++ E SG +
Sbjct: 213 SLLFGWSVQRNVKEARRVIQDM-KSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALN 271
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYN--VRIL 250
I+ EM ++P +++++ + ++ E ++L+ M+ + G P +Y VR+L
Sbjct: 272 IMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMK-RSGCDPDTGSYYFVVRVL 330
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
L R + ++ MI G +P + LI C ++ A ++F MK+
Sbjct: 331 YL--TGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGG 388
Query: 311 ESPCYFTLAHFLCEGGDFESAFEITKESM 339
Y L LC+GG+FE E+ +E++
Sbjct: 389 YGQVYDLLIPKLCKGGNFEKGRELWEEAL 417
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 92/211 (43%), Gaps = 14/211 (6%)
Query: 174 YNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMME 233
+N V++ AE +++ +LS++ + + + TFS E K E+ + K+++
Sbjct: 106 FNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILD 165
Query: 234 EKYGMSPALSTYNVRILSLCKLKRTSEAKALL---QGMISGGRKPNWVSFSHLIHGYCWE 290
K+ T I +LC A ++ + +ISG + S L+ G+ +
Sbjct: 166 -KFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRS---LLFGWSVQ 221
Query: 291 GNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCE-------GGDFESAFEITKESMDKGW 343
N+ EA++V DMK G P+ C+ +L LCE G A I E
Sbjct: 222 RNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKI 281
Query: 344 VPNFTTMKKLVTGLVGVSKTDDAKELIKQVK 374
P + L++ L + ++ ++++Q+K
Sbjct: 282 QPTSMSYNILLSCLGRTRRVRESCQILEQMK 312
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 133/327 (40%), Gaps = 40/327 (12%)
Query: 79 FSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSL 138
FS ++ +L +S L F S + +Y +A L A + M ++ I P V
Sbjct: 574 FSEAEKLYLNLKSSGVVLDRIGF-SIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLF 632
Query: 139 NALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMD 198
+L ++ +Y K+ I + E YN VI A + + EM
Sbjct: 633 RDMLRIYQKCDLQDKLQHLYYRIRKS-GIHWNQEMYNCVINCCARALPLDELSGTFEEMI 691
Query: 199 RNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGM-------------------- 238
R PN VTF+ ++ + K F++V ++ ++ +++G+
Sbjct: 692 RYGFTPNTVTFNVLLDVYGKAKLFKKVNELF-LLAKRHGVVDVISYNTIIAAYGKNKDYT 750
Query: 239 --------------SPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLI 284
S +L YN + + K K+ + +++L+ M P+ +++ +I
Sbjct: 751 NMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMI 810
Query: 285 HGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWV 344
+ Y +G +DE V ++K+ G P+ Y TL GG E A + KE + +
Sbjct: 811 NIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNII 870
Query: 345 PNFTTMKKLVTGLVGVSKTDDAKELIK 371
P+ T LVT L + D+ E IK
Sbjct: 871 PDKVTYTNLVTAL---RRNDEFLEAIK 894
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 97/220 (44%), Gaps = 5/220 (2%)
Query: 124 RMRDEFQITPSVKSLNALLFAALIAKDYK-EVSRIYLDFPKNYSIQPDVETYNTVIKSFA 182
M EF + P+V ++ L+ L K++ E + + + I + Y+++I +
Sbjct: 234 HMMLEFGVRPNVATIGMLM--GLYQKNWNVEEAEFAFSHMRKFGIVCE-SAYSSMITIYT 290
Query: 183 ESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPAL 242
++ M ++ VR + + + + K E +L ME G SP +
Sbjct: 291 RLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAA-GFSPNI 349
Query: 243 STYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFAD 302
YN I K+ + A+ L + + G +P+ S+ +I G+ N +EAK + +
Sbjct: 350 IAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQE 409
Query: 303 MKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
+K+ GYKP S FTL + + GD + A + ++ G
Sbjct: 410 LKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIG 449
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 104/275 (37%), Gaps = 21/275 (7%)
Query: 108 LYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSI 167
LY + + A AF+ MR + S S ++ L D E +D K +
Sbjct: 254 LYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYDKAEEV---IDLMKQDRV 310
Query: 168 QPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK 227
+ +E + ++ ++++ G SIL M+ PN + ++ I G+ GK
Sbjct: 311 RLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGY---------GK 361
Query: 228 VLKMMEEK--------YGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVS 279
+ KM + G+ P ++Y I + EAK Q + G KPN +
Sbjct: 362 IFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFN 421
Query: 280 FSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESM 339
LI+ G+ D A K DM G + S L + + G + + K S
Sbjct: 422 LFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYE-KVGKIDVVPCVLKGSF 480
Query: 340 DKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVK 374
N T+ LV V DD L+++ K
Sbjct: 481 HNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKK 515
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 89/209 (42%), Gaps = 1/209 (0%)
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL 229
DV YN +IK++ ++ S+ M P+ T+++ + +E ++L
Sbjct: 514 DVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRIL 573
Query: 230 KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW 289
M + G P TY I S +L S+A L + M G KPN V + LI+G+
Sbjct: 574 AEMLDS-GCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAE 632
Query: 290 EGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTT 349
G ++EA + F M++ G + +L + G E A + + D P+
Sbjct: 633 SGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAA 692
Query: 350 MKKLVTGLVGVSKTDDAKELIKQVKEKFT 378
+++ + +A+ + ++EK T
Sbjct: 693 SNSMLSLCADLGIVSEAESIFNALREKGT 721
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 113/290 (38%), Gaps = 37/290 (12%)
Query: 127 DEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGS 186
+E I+P K+ N LL A D + Y K + PD T+ V+ +
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRK-VGLFPDTVTHRAVLHILCQRKM 425
Query: 187 TSSVYSILSEMDRNSVRPN----------------------------------AVTFSNA 212
+ V ++++EMDRNS+R + + T +
Sbjct: 426 VAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAV 485
Query: 213 IEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGG 272
I+ + + + E V G + YNV I + K K +A +L +GM + G
Sbjct: 486 IDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQG 545
Query: 273 RKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAF 332
P+ +++ L +DEA+++ A+M G KP Y + G A
Sbjct: 546 TWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAV 605
Query: 333 EITKESMDK-GWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTESS 381
++ E+M+K G PN L+ G ++A + + ++E +S+
Sbjct: 606 DLY-EAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSN 654
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 2/204 (0%)
Query: 173 TYNTVIKSFAESGSTSSVYSIL-SEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKM 231
T VI +AE G ++ + + + R + + ++ I+ + K E+ + K
Sbjct: 481 TLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKG 540
Query: 232 MEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEG 291
M+ + G P TYN L + EA+ +L M+ G KP +++ +I Y G
Sbjct: 541 MKNQ-GTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLG 599
Query: 292 NLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMK 351
L +A ++ M+K G KP Y +L + E G E A + + + G N +
Sbjct: 600 LLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLT 659
Query: 352 KLVTGLVGVSKTDDAKELIKQVKE 375
L+ V ++A+ + ++K+
Sbjct: 660 SLIKAYSKVGCLEEARRVYDKMKD 683
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 8/217 (3%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
++P+ Y ++I FAESG M+ + V+ N + ++ I+ + EE
Sbjct: 615 GVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEA 674
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCK-LKRTSEAKALLQGMISGGRKPNWVSFSHLI 284
+V M++ G P ++ N +LSLC L SEA+++ + G + +SF+ ++
Sbjct: 675 RRVYDKMKDSEG-GPDVAASN-SMLSLCADLGIVSEAESIFNALREKG-TCDVISFATMM 731
Query: 285 HGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESM-DKGW 343
+ Y G LDEA +V +M++ G + + + G E+ E + ++
Sbjct: 732 YLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKL 791
Query: 344 VPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTES 380
+ ++ T K L T L K E + Q++ + E+
Sbjct: 792 LLDWGTFKTLFTLL---KKGGVPSEAVSQLQTAYNEA 825
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%)
Query: 243 STYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFAD 302
ST+N I K R ++A L M+ G + V+F+ +IH G+L EA+ +
Sbjct: 306 STFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKK 365
Query: 303 MKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
M+++G P++ Y L + GD E+A E ++ G P+ T + ++
Sbjct: 366 MEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVL 417
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 1/133 (0%)
Query: 173 TYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMM 232
T+NT+I + ++G + ++ SEM ++ V + VTF+ I + E +LK M
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 233 EEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGN 292
EEK G+SP TYN+ + A + + G P+ V+ ++H C
Sbjct: 367 EEK-GISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKM 425
Query: 293 LDEAKKVFADMKK 305
+ E + V A+M +
Sbjct: 426 VAEVEAVIAEMDR 438
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 115/248 (46%), Gaps = 12/248 (4%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIY--LDFPKNYSIQPDVETYNTVIKSFAESGSTS 188
+ P V + N+L+ + KD +E+ + Y +D + PDV TY TVI G
Sbjct: 242 LKPDVVTYNSLI--DVYCKD-REIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPD 298
Query: 189 SVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNV- 247
+L EM P+ ++ AI F ++ + K++ M +K G+SP +TYN+
Sbjct: 299 KAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKK-GLSPNATTYNLF 357
Query: 248 -RILSLCK-LKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKK 305
R+LSL L R+ E L M+ PN S LI + +D A +++ DM
Sbjct: 358 FRVLSLANDLGRSWE---LYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVV 414
Query: 306 RGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDD 365
+G+ S L LC+ E A + E ++KG P+ + K++ + +K D+
Sbjct: 415 KGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDE 474
Query: 366 AKELIKQV 373
LI+++
Sbjct: 475 VNNLIQKM 482
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 5/180 (2%)
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL 229
D +N ++++ + S + ++ + ++ +P+ TF+ + G+ K EE
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSL-KHQFQPDLQTFNILLSGW---KSSEEAEAFF 234
Query: 230 KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW 289
+ M+ K G+ P + TYN I CK + +A L+ M P+ ++++ +I G
Sbjct: 235 EEMKGK-GLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGL 293
Query: 290 EGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTT 349
G D+A++V +MK+ G P+ Y C A ++ E + KG PN TT
Sbjct: 294 IGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATT 353
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 67/159 (42%), Gaps = 4/159 (2%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
SI P++ +NT+I + +G Y+ L M + + PN VT++ ++ E
Sbjct: 789 SIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESA 848
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
+ E P Y+ + LC KR +A AL+ M G PN S+ L+
Sbjct: 849 IDLF----EGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQ 904
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCE 324
C+ EA KV DM P S + L + LCE
Sbjct: 905 CLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCE 943
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 86/196 (43%), Gaps = 5/196 (2%)
Query: 164 NYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFE 223
N P +YN+VIK + + S+++ + P+ T+ + + +
Sbjct: 505 NLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRD 564
Query: 224 EVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHL 283
++ MEE G+ P ++ Y+ I SL K R EA+ M+ G +P+ +++ +
Sbjct: 565 AAFAIIDAMEE-LGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIM 623
Query: 284 IHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGW 343
I+ Y G +DEA ++ ++ K +P S Y L + G E + + ++ G
Sbjct: 624 INTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGL 683
Query: 344 VPNFTTMKKLVTGLVG 359
PN L T L+G
Sbjct: 684 SPNVV----LYTALIG 695
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 77/181 (42%), Gaps = 4/181 (2%)
Query: 171 VETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV-L 229
V Y ++ F + G + ++ M+ + + V ++ ++ + + ++ L
Sbjct: 237 VNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYL 296
Query: 230 KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW 289
+M+E + + P + +N I KL + + + MI G + N ++ +I YC
Sbjct: 297 RMVERSFELDPCI--FNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCK 354
Query: 290 EGNLDEAKKVFA-DMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFT 348
EGN+D A ++F + CY L + G + A ++ +D G VP+
Sbjct: 355 EGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHI 414
Query: 349 T 349
T
Sbjct: 415 T 415
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 80/172 (46%), Gaps = 1/172 (0%)
Query: 204 PNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKA 263
P ++++ I+ + E E++ ++ +++E P + TY + + LCK A A
Sbjct: 510 PLPFSYNSVIKCLFQENIIEDLASLVNIIQE-LDFVPDVDTYLIVVNELCKKNDRDAAFA 568
Query: 264 LLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLC 323
++ M G +P +S +I +G + EA++ FA M + G +P+ Y + +
Sbjct: 569 IIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYA 628
Query: 324 EGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE 375
G + A E+ +E + P+ T L++G V + + + + ++ E
Sbjct: 629 RNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLE 680
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 104/255 (40%), Gaps = 17/255 (6%)
Query: 141 LLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRN 200
+L + + E YLD + P+V Y +I F + G +++ M N
Sbjct: 657 VLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGEN 716
Query: 201 SVRPNAVTFSNAIEGFY---SEKKFEEV----GKVLKMMEEKYGMSPALSTYNVRILSLC 253
++ + + + + G + + KK +V GK K+++ P +S + SL
Sbjct: 717 DIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKE-KLLQRLIRTKPLVSIPS----SLG 771
Query: 254 KLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESP 313
S A ++ G + PN + +I GYC G LDEA M+K G P
Sbjct: 772 NYGSKSFAMEVI-GKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLV 830
Query: 314 CYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
Y L E GD ESA ++ + + P+ L+ GL + DA L+ ++
Sbjct: 831 TYTILMKSHIEAGDIESAIDLFEGT---NCEPDQVMYSTLLKGLCDFKRPLDALALMLEM 887
Query: 374 -KEKFTESSDKWDEI 387
K + D ++++
Sbjct: 888 QKSGINPNKDSYEKL 902
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 76/151 (50%), Gaps = 6/151 (3%)
Query: 158 YLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFY 217
+L+ + I P++ TY ++KS E+G S + + + P+ V +S ++G
Sbjct: 816 HLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLF---EGTNCEPDQVMYSTLLKGLC 872
Query: 218 SEKK-FEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPN 276
K+ + + +L+M +K G++P +Y + LC + T EA +++ M + P
Sbjct: 873 DFKRPLDALALMLEM--QKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPR 930
Query: 277 WVSFSHLIHGYCWEGNLDEAKKVFADMKKRG 307
++ + LI+ C E L EA+ +FA M + G
Sbjct: 931 SINHTWLIYILCEEKKLREARALFAIMVQSG 961
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 87/202 (43%), Gaps = 6/202 (2%)
Query: 119 VTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVI 178
+ + + E P V + ++ L K+ ++ + +D + ++P V Y+++I
Sbjct: 531 LASLVNIIQELDFVPDVDTY-LIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSII 589
Query: 179 KSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE--KY 236
S + G ++M + ++P+ + + I + + +E + ++EE K+
Sbjct: 590 GSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANE---LVEEVVKH 646
Query: 237 GMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEA 296
+ P+ TY V I K+ + L M+ G PN V ++ LI + +G+ +
Sbjct: 647 FLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFS 706
Query: 297 KKVFADMKKRGYKPESPCYFTL 318
+F M + K + Y TL
Sbjct: 707 FTLFGLMGENDIKHDHIAYITL 728
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 79/154 (51%), Gaps = 6/154 (3%)
Query: 161 FPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEK 220
FP+ +++ D YN VI+ FA+ G + ++ EMD + P+ +T+++ I G+ +
Sbjct: 156 FPE-FNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAG 214
Query: 221 KFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCK---LKRTSEAKALLQGMISGGR-KPN 276
K ++ ++ K M K+ TY+ + +CK ++R E A ++ GG PN
Sbjct: 215 KIDDAWRLAKEM-SKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPN 273
Query: 277 WVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
V+++ +I +C + ++EA V M RG P
Sbjct: 274 AVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMP 307
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 90/195 (46%), Gaps = 6/195 (3%)
Query: 167 IQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVG 226
I P+ TY VI++F E +L M PN VT I+G E+V
Sbjct: 270 ISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLEND--EDVK 327
Query: 227 KVLKMMEE--KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLI 284
+ K++++ K G ++ +SL ++KR EA+ + + M+ G +P+ ++ SH+
Sbjct: 328 ALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVF 387
Query: 285 HGYCWEGNLDEAKKVFADMKKRGYKP--ESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
C + ++ +++K+ K +S + L LC+ G+ A ++ K +DK
Sbjct: 388 RELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDKK 447
Query: 343 WVPNFTTMKKLVTGL 357
+ ++K++ L
Sbjct: 448 MRLKVSHVEKIIEAL 462
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 111/260 (42%), Gaps = 8/260 (3%)
Query: 119 VTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVI 178
V + + FQ P V N L+ A YKE +Y+ ++ + P +TY +I
Sbjct: 163 VCEWILRKSSFQ--PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYV-PTEDTYALLI 219
Query: 179 KSFAESGSTSSVYSILSEMDRNSVRPN--AVTFSNA-IEGFYSEK-KFEEVGKVLKMMEE 234
K++ +G +L EM + V P VT NA IEG K EE V + M+
Sbjct: 220 KAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKR 279
Query: 235 KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLD 294
P TYN+ I K ++ + L M S KPN +++ L++ + EG +
Sbjct: 280 DR-CKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCE 338
Query: 295 EAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
+A+++F +++ G +P+ Y L G A EI G P+ + +V
Sbjct: 339 KAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMV 398
Query: 355 TGLVGVSKTDDAKELIKQVK 374
DA+ + +++K
Sbjct: 399 DAYGRAGLHSDAEAVFEEMK 418
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/352 (19%), Positives = 136/352 (38%), Gaps = 37/352 (10%)
Query: 30 SRTALHLLKSETNPERILDICRAASLTPDFHLDRIALSVAISKLKDGNHFSTIDQFLRDL 89
++ L ++ ET+P+++ D+ A T D I +SV + K + + +++
Sbjct: 111 AQKILSFIQKETDPDKVADVLGALPSTHASWDDLINVSVQLRLNKKWDSIILVCEWILRK 170
Query: 90 PTSRPD--------------------------LRNERFLSQS------IVLYGQARMLPN 117
+ +PD L R++ I Y A ++
Sbjct: 171 SSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIER 230
Query: 118 AVTAFTRMRDEFQITP---SVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETY 174
A M++ ++P V NA + + K E + K +P ETY
Sbjct: 231 AEVVLVEMQNH-HVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETY 289
Query: 175 NTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE 234
N +I + ++ + + + EM + +PN T++ + F E E+ ++ + ++E
Sbjct: 290 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 349
Query: 235 KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLD 294
G+ P + YN + S + A + M G +P+ S++ ++ Y G
Sbjct: 350 D-GLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHS 408
Query: 295 EAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPN 346
+A+ VF +MK+ G P + L + D I KE + G P+
Sbjct: 409 DAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 460
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/264 (17%), Positives = 114/264 (43%), Gaps = 13/264 (4%)
Query: 118 AVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFP-----KNYSIQPDVE 172
A+ F RM+ + + P+ ++ N L+ Y + S+ Y+ + +++ +P++
Sbjct: 270 AIDVFQRMKRD-RCKPTTETYN------LMINLYGKASKSYMSWKLYCEMRSHQCKPNIC 322
Query: 173 TYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMM 232
TY ++ +FA G I ++ + + P+ ++ +E + ++ +M
Sbjct: 323 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 382
Query: 233 EEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGN 292
+ G P ++YN+ + + + S+A+A+ + M G P S L+ Y +
Sbjct: 383 QHM-GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARD 441
Query: 293 LDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKK 352
+ + + + +M + G +P++ ++ + G F +I E + + +T
Sbjct: 442 VTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNI 501
Query: 353 LVTGLVGVSKTDDAKELIKQVKEK 376
L+ + +EL ++KEK
Sbjct: 502 LINIYGKAGFLERIEELFVELKEK 525
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 111/260 (42%), Gaps = 8/260 (3%)
Query: 119 VTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVI 178
V + + FQ P V N L+ A YKE +Y+ ++ + P +TY +I
Sbjct: 141 VCEWILRKSSFQ--PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYV-PTEDTYALLI 197
Query: 179 KSFAESGSTSSVYSILSEMDRNSVRPN--AVTFSNA-IEGFYSEK-KFEEVGKVLKMMEE 234
K++ +G +L EM + V P VT NA IEG K EE V + M+
Sbjct: 198 KAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKR 257
Query: 235 KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLD 294
P TYN+ I K ++ + L M S KPN +++ L++ + EG +
Sbjct: 258 DR-CKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCE 316
Query: 295 EAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
+A+++F +++ G +P+ Y L G A EI G P+ + +V
Sbjct: 317 KAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMV 376
Query: 355 TGLVGVSKTDDAKELIKQVK 374
DA+ + +++K
Sbjct: 377 DAYGRAGLHSDAEAVFEEMK 396
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/352 (19%), Positives = 136/352 (38%), Gaps = 37/352 (10%)
Query: 30 SRTALHLLKSETNPERILDICRAASLTPDFHLDRIALSVAISKLKDGNHFSTIDQFLRDL 89
++ L ++ ET+P+++ D+ A T D I +SV + K + + +++
Sbjct: 89 AQKILSFIQKETDPDKVADVLGALPSTHASWDDLINVSVQLRLNKKWDSIILVCEWILRK 148
Query: 90 PTSRPD--------------------------LRNERFLSQS------IVLYGQARMLPN 117
+ +PD L R++ I Y A ++
Sbjct: 149 SSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIER 208
Query: 118 AVTAFTRMRDEFQITP---SVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETY 174
A M++ ++P V NA + + K E + K +P ETY
Sbjct: 209 AEVVLVEMQNH-HVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETY 267
Query: 175 NTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE 234
N +I + ++ + + + EM + +PN T++ + F E E+ ++ + ++E
Sbjct: 268 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 327
Query: 235 KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLD 294
G+ P + YN + S + A + M G +P+ S++ ++ Y G
Sbjct: 328 D-GLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHS 386
Query: 295 EAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPN 346
+A+ VF +MK+ G P + L + D I KE + G P+
Sbjct: 387 DAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 438
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/264 (17%), Positives = 114/264 (43%), Gaps = 13/264 (4%)
Query: 118 AVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFP-----KNYSIQPDVE 172
A+ F RM+ + + P+ ++ N L+ Y + S+ Y+ + +++ +P++
Sbjct: 248 AIDVFQRMKRD-RCKPTTETYN------LMINLYGKASKSYMSWKLYCEMRSHQCKPNIC 300
Query: 173 TYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMM 232
TY ++ +FA G I ++ + + P+ ++ +E + ++ +M
Sbjct: 301 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 360
Query: 233 EEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGN 292
+ G P ++YN+ + + + S+A+A+ + M G P S L+ Y +
Sbjct: 361 QH-MGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARD 419
Query: 293 LDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKK 352
+ + + + +M + G +P++ ++ + G F +I E + + +T
Sbjct: 420 VTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNI 479
Query: 353 LVTGLVGVSKTDDAKELIKQVKEK 376
L+ + +EL ++KEK
Sbjct: 480 LINIYGKAGFLERIEELFVELKEK 503
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 59/116 (50%)
Query: 261 AKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAH 320
A L M G P+ + ++ LI GY G LD+AK++F +M +G P Y ++
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 321 FLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
LC G+F A + KE +G PNF LV L K +A+++IK++ +K
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKK 823
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 3/116 (2%)
Query: 194 LSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLC 253
L+ M + P+ + ++ I+G+ + ++ ++ + M K G P + TYN I LC
Sbjct: 712 LNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVK-GQLPNVFTYNSMIRGLC 770
Query: 254 KLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWE-GNLDEAKKVFADMKKRGY 308
EA LL+ M S G PN+V +S L+ GY + G L EA+KV +M K+G+
Sbjct: 771 MAGEFREACWLLKEMESRGCNPNFVVYSTLV-GYLRKAGKLSEARKVIKEMVKKGH 825
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Query: 159 LDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYS 218
L+ K I P V Y T+I + SG + EM PN T+++ I G
Sbjct: 712 LNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCM 771
Query: 219 EKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWV 278
+F E +LK ME + G +P Y+ + L K + SEA+ +++ M+ G + V
Sbjct: 772 AGEFREACWLLKEMESR-GCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGHYVHLV 830
Query: 279 S 279
S
Sbjct: 831 S 831
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
L M+E G+ P++ Y I +AK + + M G+ PN +++ +I G C
Sbjct: 712 LNHMKE-VGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLC 770
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
G EA + +M+ RG P Y TL +L + G A ++ KE + KG
Sbjct: 771 MAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 1/167 (0%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
P+ E + +++ +G S + ++ M + + + +S + GF+ + ++ +
Sbjct: 210 PNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDL 269
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
M + G SP L TY I L EA +L + S G P+ V + +IH Y
Sbjct: 270 FNKMIQ-IGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYT 328
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEIT 335
G +EA+KVF ++KR P+ + ++ LC G F+ IT
Sbjct: 329 RLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRIT 375
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/321 (19%), Positives = 123/321 (38%), Gaps = 9/321 (2%)
Query: 59 FHLDRIALSVAISKLKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNA 118
FH DR + K + +ID+ + L S +++ FL + ++ + + A
Sbjct: 69 FHDDRAFDHMVGVVEKLTREYYSIDRIIERLKISGCEIKPRVFLLL-LEIFWRGHIYDKA 127
Query: 119 VTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIY--LDFPKNYSIQPDVETYNT 176
+ +T M F P+ +++N ++ I+ + F +S + +
Sbjct: 128 IEVYTGM-SSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFFSFDIALSHFC- 185
Query: 177 VIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKY 236
S G V +L M PN F + E +V+ +M
Sbjct: 186 ---SRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICS- 241
Query: 237 GMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEA 296
G+S +++ +++ + + +A L MI G PN V+++ LI G+ G +DEA
Sbjct: 242 GISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEA 301
Query: 297 KKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTG 356
V + ++ G P+ + H G FE A ++ + VP+ T +++
Sbjct: 302 FTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSS 361
Query: 357 LVGVSKTDDAKELIKQVKEKF 377
L K D + + F
Sbjct: 362 LCLSGKFDLVPRITHGIGTDF 382
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 131/309 (42%), Gaps = 5/309 (1%)
Query: 59 FHLDRIALSVAISKLKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNA 118
F ++ I +V + L+ G F I++ ++ +L N + S I + + A
Sbjct: 182 FPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITY-STIITCAKRCNLYNKA 240
Query: 119 VTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVI 178
+ F RM + + P + +A+L + +EV +Y + +PD ++ +
Sbjct: 241 IEWFERMY-KTGLMPDEVTYSAILDVYSKSGKVEEVLSLY-ERAVATGWKPDAIAFSVLG 298
Query: 179 KSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGM 238
K F E+G + +L EM V+PN V ++ +E K + M E G+
Sbjct: 299 KMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEA-GL 357
Query: 239 SPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKK 298
+P T + K + +A L + M + +++ ++ L++ G +EA++
Sbjct: 358 TPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAER 417
Query: 299 VFADMKKR-GYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGL 357
+F DMK+ +P++ Y + + GG E A E+ +E + G N LV L
Sbjct: 418 LFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCL 477
Query: 358 VGVSKTDDA 366
+ DD
Sbjct: 478 GKAKRIDDV 486
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 8/226 (3%)
Query: 155 SRIYLDFPKNYSIQPDVET--YNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNA 212
+ + ++ K+ S+ P +ET YN +KS + + EM ++ V + +T+S
Sbjct: 169 THTFFNWVKSKSLFP-METIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTI 227
Query: 213 IEGFYSEKKFEEVGKVLKMMEEKY--GMSPALSTYNVRILSLCKLKRTSEAKALLQGMIS 270
I K+ K ++ E Y G+ P TY+ + K + E +L + ++
Sbjct: 228 IT---CAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVA 284
Query: 271 GGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFES 330
G KP+ ++FS L + G+ D + V +MK KP Y TL + G
Sbjct: 285 TGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGL 344
Query: 331 AFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
A + E ++ G PN T+ LV DA +L +++K K
Sbjct: 345 ARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAK 390
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Query: 234 EKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNL 293
+K G++P +S YN I + CK + AK L M G K N +++ LI EG
Sbjct: 424 KKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEA 483
Query: 294 DEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGW-VPNFTTMKK 352
+E+ ++F M +RG +P+ Y +L LC+ E+A E+ ++ M++ + +
Sbjct: 484 EESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSE 543
Query: 353 LVTGLVGVSKTDDAKELIKQ 372
V L + +A +L+++
Sbjct: 544 FVLNLCSNGHSGEASQLLRE 563
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 102/256 (39%), Gaps = 19/256 (7%)
Query: 137 SLNALLFAALIAKDYKEVSRIY-LDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILS 195
S+ ALL + K +E+ Y L+ +N +PD Y + ++F +G+ +L
Sbjct: 223 SIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLK 282
Query: 196 EMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMM-EEKYGMSPALSTYNVRILSLCK 254
+ + V P + + I S K+ E +V +++ K+ M + + I S+
Sbjct: 283 KKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDI--LDALIGSVSA 340
Query: 255 LKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPC 314
+ S + L+ M+S G+ P + S L C D K + + +GY E
Sbjct: 341 VDPDSAVEFLVY-MVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQS 399
Query: 315 YFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVK 374
Y + FLC+ G ++ +E +G P+ + L+ AK+L
Sbjct: 400 YSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKL----- 454
Query: 375 EKFTESSDKWDEIEAE 390
WDE+ E
Sbjct: 455 ---------WDEMFVE 461
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 82/174 (47%), Gaps = 4/174 (2%)
Query: 198 DRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYG----MSPALSTYNVRILSLC 253
+ + VR +A+ ++ +E KF+E K+ +++++ ++ L T+NV + C
Sbjct: 302 ENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYC 361
Query: 254 KLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESP 313
+ EA + + M P+ +SF++L++ C L EA+K++ +M+++ KP+
Sbjct: 362 AGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEY 421
Query: 314 CYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAK 367
Y L + G + K ++ PN +L L+ K DDAK
Sbjct: 422 TYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAK 475
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 76/183 (41%), Gaps = 4/183 (2%)
Query: 162 PKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKK 221
P++ ++ ++ T+N ++ + G + +M P+ ++F+N + +
Sbjct: 343 PRHLAV--NLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNEL 400
Query: 222 FEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFS 281
E K+ MEEK + P TY + + + K + E A + M+ +PN ++
Sbjct: 401 LAEAEKLYGEMEEK-NVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYN 459
Query: 282 HLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDK 341
L G LD+AK F DM K + Y + L E G + +I E +D
Sbjct: 460 RLQDQLIKAGKLDDAKSFF-DMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDD 518
Query: 342 GWV 344
V
Sbjct: 519 DTV 521
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 4/162 (2%)
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
I +M + PNAV ++G + +E K+ +M +K G P + Y + +
Sbjct: 121 IFKKMKEGGLIPNAVAM---LDGLCKDGLVQEAMKLFGLMRDK-GTIPEVVIYTAVVEAF 176
Query: 253 CKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPES 312
CK + +AK + + M + G PN S+ L+ G LD+A ++M + G+ P
Sbjct: 177 CKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
P + L LC E A KG+ N +K+ +
Sbjct: 237 PTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFM 278
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 4/154 (2%)
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
E+ ++ K M+E + A++ + LCK EA L M G P V ++
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVAMLD----GLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTA 171
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
++ +C +++AK++F M+ G P + Y L L + A E ++ G
Sbjct: 172 VVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESG 231
Query: 343 WVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
PN T +LV L V + A+ I + +K
Sbjct: 232 HSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQK 265
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 4/162 (2%)
Query: 193 ILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSL 252
I +M + PNAV ++G + +E K+ +M +K G P + Y + +
Sbjct: 121 IFKKMKEGGLIPNAVAM---LDGLCKDGLVQEAMKLFGLMRDK-GTIPEVVIYTAVVEAF 176
Query: 253 CKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPES 312
CK + +AK + + M + G PN S+ L+ G LD+A ++M + G+ P
Sbjct: 177 CKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 313 PCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLV 354
P + L LC E A KG+ N +K+ +
Sbjct: 237 PTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFM 278
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 4/154 (2%)
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
E+ ++ K M+E + A++ + LCK EA L M G P V ++
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVAMLD----GLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTA 171
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
++ +C +++AK++F M+ G P + Y L L + A E ++ G
Sbjct: 172 VVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESG 231
Query: 343 WVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
PN T +LV L V + A+ I + +K
Sbjct: 232 HSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQK 265
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 80/174 (45%), Gaps = 4/174 (2%)
Query: 173 TYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMM 232
+ +VI++F+ +G S+ + + +++F ++ E + E + +
Sbjct: 83 VFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKY 142
Query: 233 EEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGN 292
+ ++ ++ N+ + LC++ R+ A + Q M G P+ S+ L+ G+C EG
Sbjct: 143 CYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGK 202
Query: 293 LDEAKKVFADM----KKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
L+EA + M ++G + Y L LC+ G+ + A EI + + KG
Sbjct: 203 LEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKG 256
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 82/198 (41%), Gaps = 4/198 (2%)
Query: 190 VYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRI 249
V +L+E P ++S + E K E +VL M K G P Y ++
Sbjct: 282 VKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSK-GFEPTPFIYGAKV 340
Query: 250 LSLCKLKRTSEAKALL-QGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKR-G 307
+LC+ + EA +++ + M+ G P ++ LI G C +G EA M K+
Sbjct: 341 KALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVS 400
Query: 308 YKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAK 367
Y TL LC G F A ++ +E + K P T ++ GL + + +A
Sbjct: 401 CVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAV 460
Query: 368 ELIKQ-VKEKFTESSDKW 384
+++ V + S W
Sbjct: 461 MWLEEMVSQDMVPESSVW 478
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRN-SVRPNAVTFSNAIEGFYSEKKFEEVGK 227
P V YN +IK + G + L +M + S N T+ ++G + +F E +
Sbjct: 367 PTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQ 426
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
V++ M K P + TY++ I LC + R EA L+ M+S P + L
Sbjct: 427 VMEEMLIKSHF-PGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESV 485
Query: 288 CW 289
C+
Sbjct: 486 CF 487
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 80/174 (45%), Gaps = 4/174 (2%)
Query: 173 TYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMM 232
+ +VI++F+ +G S+ + + +++F ++ E + E + +
Sbjct: 83 VFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKY 142
Query: 233 EEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGN 292
+ ++ ++ N+ + LC++ R+ A + Q M G P+ S+ L+ G+C EG
Sbjct: 143 CYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGK 202
Query: 293 LDEAKKVFADM----KKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
L+EA + M ++G + Y L LC+ G+ + A EI + + KG
Sbjct: 203 LEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKG 256
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 82/198 (41%), Gaps = 4/198 (2%)
Query: 190 VYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRI 249
V +L+E P ++S + E K E +VL M K G P Y ++
Sbjct: 282 VKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSK-GFEPTPFIYGAKV 340
Query: 250 LSLCKLKRTSEAKALL-QGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKR-G 307
+LC+ + EA +++ + M+ G P ++ LI G C +G EA M K+
Sbjct: 341 KALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVS 400
Query: 308 YKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAK 367
Y TL LC G F A ++ +E + K P T ++ GL + + +A
Sbjct: 401 CVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAV 460
Query: 368 ELIKQ-VKEKFTESSDKW 384
+++ V + S W
Sbjct: 461 MWLEEMVSQDMVPESSVW 478
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRN-SVRPNAVTFSNAIEGFYSEKKFEEVGK 227
P V YN +IK + G + L +M + S N T+ ++G + +F E +
Sbjct: 367 PTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQ 426
Query: 228 VLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
V++ M K P + TY++ I LC + R EA L+ M+S P + L
Sbjct: 427 VMEEMLIKSHF-PGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESV 485
Query: 288 CW 289
C+
Sbjct: 486 CF 487
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 109/235 (46%), Gaps = 4/235 (1%)
Query: 106 IVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNY 165
+VL G++ A F M +E + P+V+ ALL AA + + + LD K++
Sbjct: 131 LVLLGKSGQPNRAQKLFDEMLEE-GLEPTVELYTALL-AAYTRSNLIDDAFSILDKMKSF 188
Query: 166 -SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEE 224
QPDV TY+T++K+ ++ V S+ EMD + PN VT + + G+ +F++
Sbjct: 189 PQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQ 248
Query: 225 VGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLI 284
+ KVL M P + T N+ + + + ++ + + G +P +F+ LI
Sbjct: 249 MEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILI 308
Query: 285 HGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESM 339
Y + D+ V M+K + + Y + + GD ++ E+T + M
Sbjct: 309 GSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKN-MELTFDQM 362
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 2/184 (1%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEV 225
S +P V Y V++ + + G EM P+AV + + + +
Sbjct: 183 SYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAM 242
Query: 226 GKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIH 285
K ++E+ + + S YN + SL K + L M+ G PN +++ ++
Sbjct: 243 LTFYKAVQERR-ILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVS 301
Query: 286 GYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVP 345
Y +G +EA K F +MK G+ PE Y ++ + GD+E A + ++ +G VP
Sbjct: 302 SYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVP 361
Query: 346 -NFT 348
N+T
Sbjct: 362 SNYT 365
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 90/219 (41%), Gaps = 4/219 (1%)
Query: 139 NALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMD 198
N L+ A L A + S IY + + ++TYNT+I + I S
Sbjct: 778 NTLIKAMLEAGKLQCASEIY-ERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNAR 836
Query: 199 RNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRT 258
R+ + + ++N I + K E + M++K G+ P +YN+ ++ +C R
Sbjct: 837 RSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKK-GIKPGTPSYNM-MVKICATSRL 894
Query: 259 -SEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFT 317
E LLQ M GR + ++ LI Y EA+K +K++G + +
Sbjct: 895 HHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSS 954
Query: 318 LAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTG 356
L L + G E A + + G P+ + ++ G
Sbjct: 955 LLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKG 993
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 1/163 (0%)
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL 229
D + Y +I + + G S S+ SEM + ++P +++ ++ + + EV ++L
Sbjct: 843 DEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELL 902
Query: 230 KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW 289
+ ME + G LSTY I + + +EA+ + + G + FS L+
Sbjct: 903 QAME-RNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVK 961
Query: 290 EGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAF 332
G ++EA++ + M + G P+S C T+ GD E
Sbjct: 962 AGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGI 1004
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 88/206 (42%), Gaps = 9/206 (4%)
Query: 158 YLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFY 217
Y+ K + +P TYN ++K+ ++ EM + PN +T+S I+
Sbjct: 513 YIQASKRFCFKPTTATYNILLKACGTDYYRGK--ELMDEMKSLGLSPNQITWSTLIDMCG 570
Query: 218 SEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNW 277
E ++L+ M G P + Y I + K A +L + M KPNW
Sbjct: 571 GSGDVEGAVRILRTMHSA-GTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNW 629
Query: 278 VSFSHLIHGYCWEGNLDEAKK---VFADMKKRGYKPESPCYFTLAHFLCEG---GDFESA 331
V+++ L+ G+L E ++ ++ DM+ GYKP L CEG + +S
Sbjct: 630 VTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWCEGVIQENGQSQ 689
Query: 332 FEITKESMDKGWVPNFTTMKKLVTGL 357
+I+ + D P ++K+ T +
Sbjct: 690 DKISDQEGDNAGRPVSLLIEKVATHM 715
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 99/214 (46%), Gaps = 3/214 (1%)
Query: 165 YSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEE 224
Y+I+PDV Y +I +FA++G+ S + M + N+V +++ I+ + +E
Sbjct: 604 YNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDE 663
Query: 225 VGKVLKMMEEKYGMS--PALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
+ + + + + P + T N I + +A+A+ M G + N +F+
Sbjct: 664 AEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAM 722
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
++ Y G +EA ++ M++ + Y ++ G F+ A E KE + G
Sbjct: 723 MLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSG 782
Query: 343 WVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
P+ +T K L T L+ + + A I+++++K
Sbjct: 783 IQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKK 816
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 12/239 (5%)
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF--- 222
I+P TY T+I +++ G L +M + ++P+ VT ++ + ++F
Sbjct: 217 GIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKA 276
Query: 223 EEVGKVLKMMEEKYGMSPALS--TYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSF 280
EE K E K LS TYN I + K + EA + M+ G P V+F
Sbjct: 277 EEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTF 336
Query: 281 SHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMD 340
+ +IH Y G L E + MK P++ Y L + D E A KE D
Sbjct: 337 NTMIHIYGNNGQLGEVTSLMKTMKLHC-APDTRTYNILISLHTKNNDIERAGAYFKEMKD 395
Query: 341 KGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVK------EKFTESSDKWDEIEAELIK 393
G P+ + + L+ ++A+ LI ++ +++T+S+ +EAE+++
Sbjct: 396 DGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLE 454
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 91/215 (42%), Gaps = 4/215 (1%)
Query: 103 SQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFP 162
S +I YG+ L A F ++ + T V N ++ A I+K ++ ++ +
Sbjct: 475 SANIDAYGERGYLSEAERVFICCQEVNKRT--VIEYNVMIKAYGISKSCEKACELF-ESM 531
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
+Y + PD TYNT+++ A + L +M + + + I F +
Sbjct: 532 MSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQL 591
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
+V K M E Y + P + Y V I + +A + ++ M G N V ++
Sbjct: 592 NMAEEVYKEMVE-YNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNS 650
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFT 317
LI Y G LDEA+ ++ + + K + P +T
Sbjct: 651 LIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYT 685
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 4/183 (2%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
K+ ++ DV YNTVI++ S + EM PN T + I+ + +
Sbjct: 251 KSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRM 310
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
+ ++L M ++ G P TY + +L++ SE +L MI G +P ++
Sbjct: 311 RDAYRMLDEMPKR-GCQPDSITY---MCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVM 366
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKG 342
L+ + G L V+ MK+ G P+S Y + L + G + A E +E +++G
Sbjct: 367 LMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERG 426
Query: 343 WVP 345
P
Sbjct: 427 LSP 429
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 97/241 (40%), Gaps = 37/241 (15%)
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSN---------------AIE 214
D T+N++I + ++G T + + +M ++RPNAVT ++ +
Sbjct: 485 DQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLH 544
Query: 215 GFYSEKKFEEVGKVLKMMEEKYGMSPALS---------------TYNVRILSLCKLKRTS 259
GF + ++ V + + Y + A+ TY IL +
Sbjct: 545 GFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGE 604
Query: 260 EAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKK-RGYKPESPCYFTL 318
A +L M G KP+ ++F ++ + G +DE K+F +M++ +P S Y +
Sbjct: 605 RAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCI 664
Query: 319 AHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFT 378
L G A+E K ++G + +L L+G K EL + V E+
Sbjct: 665 TDMLGRVGRVNEAYEFVKGLGEEG------NIAELWGSLLGSCKLHGELELAETVSERLA 718
Query: 379 E 379
+
Sbjct: 719 K 719
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 1/144 (0%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
K+ + PD N +IK++A+ + EM PNA T+S ++G + +
Sbjct: 215 KSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRV 274
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
+ K M+ K GM P S Y V I SL +R EA ++ M++ P+ ++++
Sbjct: 275 GQGLGFYKEMQVK-GMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNT 333
Query: 283 LIHGYCWEGNLDEAKKVFADMKKR 306
++ C G EA ++ + KKR
Sbjct: 334 VLTELCRGGRGSEALEMVEEWKKR 357
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 64/140 (45%)
Query: 237 GMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEA 296
G+ P N+ I + K EA + + M G +PN ++S+L+ G C +G + +
Sbjct: 218 GVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQG 277
Query: 297 KKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTG 356
+ +M+ +G P CY L L + A E+ + + P+ T ++T
Sbjct: 278 LGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTE 337
Query: 357 LVGVSKTDDAKELIKQVKEK 376
L + +A E++++ K++
Sbjct: 338 LCRGGRGSEALEMVEEWKKR 357
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 5/174 (2%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
+N IQPD T ++V+ + ++ G+TS + S + + ++ + + ++ I+ + F
Sbjct: 323 RNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDF 382
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
+ K+ + +K +S Y+ I+ +EA +L MI PN V+F+
Sbjct: 383 AKAFKMFSNLNKKDTVS-----YSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTG 437
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITK 336
L+ Y G + E K F MK +P + Y + L G E A+E+ K
Sbjct: 438 LLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIK 491
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 124/304 (40%), Gaps = 52/304 (17%)
Query: 86 LRDLPTSRPDLRNE---RFLSQSIVLYGQARMLPNAVTAFTRMRD-----------EFQI 131
LR P++ P R+ R + L GQ L N V + R D F
Sbjct: 116 LRRDPSAPPPKRDPNAPRLPDSTSALVGQRLNLHNRVQSLIRASDLDAASKLARQSVFSN 175
Query: 132 T-PSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
T P+V + NA++ A AK Y E ++ F K +I P+V +YN +I + + G+
Sbjct: 176 TRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEA 235
Query: 191 YSILSEMDRNS-VRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRI 249
+ + N+ P++VT+ + +G
Sbjct: 236 LEVYRHILANAPFAPSSVTYRHLTKG---------------------------------- 261
Query: 250 LSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYK 309
L + R +A +LL+ M+S G+ + +++LI GY G+ D+A + F ++K +
Sbjct: 262 --LVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTV 319
Query: 310 PESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKEL 369
+ T + E G+ + A E + +DK + + T L+ + K D+A L
Sbjct: 320 YDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWAL 379
Query: 370 IKQV 373
++
Sbjct: 380 FNEM 383
>AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2435007-2439344 REVERSE
LENGTH=821
Length = 821
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 122/295 (41%), Gaps = 30/295 (10%)
Query: 59 FHLDRIALSVAISKLKDGNHFSTI-------------DQFLRDLPTSRPDLRNERFLSQS 105
+HL+R+ V I+K++ + + I +FL +L S ++N +S
Sbjct: 284 YHLERLLEIVDITKVRSSDLLANIFEYLGRFSLDSVASRFLWELRESDEGVKN---VSDL 340
Query: 106 IVLYGQARMLP---NAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFP 162
I +Y P + + F +M +E + PS S L+ + D EV LD
Sbjct: 341 ISIYSTCTPNPTVEDTILKFNKMHEELDVMPSSTSYEKLVKYSC---DSNEVVTA-LDVV 396
Query: 163 KNYS---IQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSE 219
+ + + ++++ + E V I S M SV+PN F + I
Sbjct: 397 EKMGEAGLMISADILHSLLHAIDEVLEFDLVRRIHSIMCTKSVKPNTENFRSIIRLCTRI 456
Query: 220 KKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVS 279
K FE +L ++ + + P S +N + + K S A +++ M G KP+ ++
Sbjct: 457 KDFEGAYNMLGNLK-NFNLEPNSSMFNCILAGYFREKNVSSALMVVKQMKEAGVKPDSIT 515
Query: 280 FSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEI 334
F +LI+ E D K + +MK+ G + Y +L G FE A ++
Sbjct: 516 FGYLINNCTQE---DAITKYYEEMKQAGVQATKRIYMSLIDAYAASGKFEKAKQV 567
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 118/299 (39%), Gaps = 51/299 (17%)
Query: 93 RPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLF----AALIA 148
R LR+ ++ + + G AR A+ F +M + Q+ P + + + + A L+
Sbjct: 249 RKHLRSRFVYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLK 308
Query: 149 KDYKEVSRIYLD--------FPKNYS--IQPDVETYNTVIKSFAESGSTSSVYSILSEMD 198
+ K + R+ KN+ ++PD+ YN ++ + + +V + E+
Sbjct: 309 ELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELR 368
Query: 199 RNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRT 258
+N +RPN T YG++ + +L K R
Sbjct: 369 KNGLRPNGAT---------------------------YGLAMEV------MLESGKFDRV 395
Query: 259 SEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTL 318
+ + M S G P +++ L+ EG ++EA + DM+++G Y+ L
Sbjct: 396 HD---FFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYEL 452
Query: 319 AHFLCEGGDF-ESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEK 376
A LC G + ++ E+ + + P T L+ + DD + + +K+K
Sbjct: 453 ACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQYMKDK 511
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 109/276 (39%), Gaps = 46/276 (16%)
Query: 137 SLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSE 196
S N +L + A + + RI+ + P D +++T+I A +GS + + E
Sbjct: 205 SWNVMLAGYIKAGELESAKRIFSEMP-----HRDDVSWSTMIVGIAHNGSFNESFLYFRE 259
Query: 197 MDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLK 256
+ R + PN V+ + + FE GK+L EK G S +S N I +
Sbjct: 260 LQRAGMSPNEVSLTGVLSACSQSGSFE-FGKILHGFVEKAGYSWIVSVNNALIDMYSRCG 318
Query: 257 RTSEAKALLQGM------------ISG--------------------GRKPNWVSFSHLI 284
A+ + +GM I+G G P+ +SF L+
Sbjct: 319 NVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLL 378
Query: 285 HGYCWEGNLDEAKKVFADMKKRGY-KPESPCYFTLAHFLCEGGDFESAFEITKESMDKGW 343
H G ++E + F++MK+ + +PE Y + G + A++ +
Sbjct: 379 HACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMP---- 434
Query: 344 VPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTE 379
+P + + L+G + EL +QVK++ E
Sbjct: 435 IPPTAIVWRT---LLGACSSHGNIELAEQVKQRLNE 467
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 125/302 (41%), Gaps = 36/302 (11%)
Query: 98 NERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRI 157
N + IV+Y + L + F M+D ++ S N++L ++ Y + +
Sbjct: 123 NVSMCNSLIVMYSRNGKLELSRKVFNSMKDR-----NLSSWNSIL-SSYTKLGYVDDAIG 176
Query: 158 YLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSN------ 211
LD + ++PD+ T+N+++ +A G + ++L M ++P+ + S+
Sbjct: 177 LLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVA 236
Query: 212 ---------AIEGFYSEKKFEE---VGKVLKMMEEKYGMSP------------ALSTYNV 247
AI G+ + V L M K G P + +N
Sbjct: 237 EPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNS 296
Query: 248 RILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRG 307
+ L +A+AL+ M G KP+ ++++ L GY G ++A V MK++G
Sbjct: 297 LVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKG 356
Query: 308 YKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAK 367
P + + + G+F +A ++ + ++G PN TM L+ L +S K
Sbjct: 357 VAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGK 416
Query: 368 EL 369
E+
Sbjct: 417 EV 418
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 231 MMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWE 290
M + G++P STY+ + SL + + EA +++ M S + ++++ + +C++
Sbjct: 133 MSNGRLGLTP--STYHPILCSLTRKYKIEEAWRVVESMRSKSVSMDVTAYNYFLTSHCYD 190
Query: 291 GNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTM 350
G L+ A +V +++ G P+S Y L C G E+A I + + G ++T
Sbjct: 191 GELESASEVMRKIEEDGNSPDSRSYDALVLGACRAGKVEAAMAILRRMEEDGVTVLYSTH 250
Query: 351 KKLVTGLV 358
++TGLV
Sbjct: 251 AHVITGLV 258
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 102/240 (42%), Gaps = 16/240 (6%)
Query: 139 NALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMD 198
N +L + E RI+L I DV +N++I FA+ G ++ EM
Sbjct: 165 NTMLHMYVTCGCLIEAWRIFLGM-----IGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMP 219
Query: 199 RNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRT 258
+ N V++++ I GF +F++ + + M+EK + P T V +L+ C
Sbjct: 220 QR----NGVSWNSMISGFVRNGRFKDALDMFREMQEK-DVKPDGFTM-VSLLNACAYLGA 273
Query: 259 SEAKALLQGMISGGR-KPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFT 317
SE + I R + N + + LI YC G ++E VF K+ + C+ +
Sbjct: 274 SEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKK----QLSCWNS 329
Query: 318 LAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKF 377
+ L G E A ++ E G P+ + ++T + A E + +KEK+
Sbjct: 330 MILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKY 389
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 78/164 (47%), Gaps = 6/164 (3%)
Query: 171 VETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLK 230
+ +N++I A +G + SE++R+ + P++V+F + + + +
Sbjct: 324 LSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFR 383
Query: 231 MMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWE 290
+M+EKY + P++ Y + + L EA+AL++ M + + V +S L+
Sbjct: 384 LMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNM---PVEEDTVIWSSLLSACRKI 440
Query: 291 GNLDEAKKVFADMKKRGYKPESPC-YFTLAHFLCEGGDFESAFE 333
GN++ AK+ +KK P+ C Y L++ G FE A E
Sbjct: 441 GNVEMAKRAAKCLKK--LDPDETCGYVLLSNAYASYGLFEEAVE 482
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 129/296 (43%), Gaps = 16/296 (5%)
Query: 102 LSQSIV-LYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLD 160
+S SI+ +Y + L A F RMR+ V + N++L A ++E + +
Sbjct: 218 VSNSILAVYAKCGELDFATKFFRRMRER-----DVIAWNSVLLAYCQNGKHEEAVELVKE 272
Query: 161 FPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGF-YSE 219
K I P + T+N +I + + G + ++ +M+ + + T++ I G ++
Sbjct: 273 MEKE-GISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNG 331
Query: 220 KKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVS 279
+++ + KM G+ P T + + LK ++ + + G + +
Sbjct: 332 MRYQALDMFRKMFLA--GVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLV 389
Query: 280 FSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESM 339
+ L+ Y G L++A+KVF +K + + + ++ C+ G A+E+
Sbjct: 390 GNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQ 445
Query: 340 DKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKE--KFTESSDKWDEIEAELIK 393
D PN T +++G + +A +L +++++ K ++ W+ I A I+
Sbjct: 446 DANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQ 501
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 84/225 (37%), Gaps = 31/225 (13%)
Query: 106 IVLYGQARMLPNAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNY 165
I Y QA A FTRM+D + P++ + N ++ + D E ++ K+
Sbjct: 425 ITGYCQAGYCGKAYELFTRMQDA-NLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDG 483
Query: 166 SIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTF---------------S 210
+Q + T+N +I + ++G + +M + PN+VT
Sbjct: 484 KVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMV 543
Query: 211 NAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALS---------------TYNVRILSLCKL 255
I G + + + V + + Y S + T+N I
Sbjct: 544 REIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLH 603
Query: 256 KRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVF 300
A AL M + G PN + S +I + GN+DE KKVF
Sbjct: 604 GSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVF 648
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 5/189 (2%)
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL 229
D E V+ + G+ + +++ M + ++ + GF ++ F E KV
Sbjct: 317 DPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVY 376
Query: 230 K--MMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGY 287
+ M EE TY + I + C+L++ ++A+ L M+ G V++S+++ Y
Sbjct: 377 EWAMKEE---CEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMY 433
Query: 288 CWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNF 347
L +A ++ A MK+RG KP Y +L D A +I KE +P+
Sbjct: 434 GKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDK 493
Query: 348 TTMKKLVTG 356
+ +++
Sbjct: 494 VSYTSMISA 502
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 95/207 (45%), Gaps = 2/207 (0%)
Query: 167 IQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVG 226
++ ++ T+ ++I + + +L M++ SV + ++ I+GF S K EE
Sbjct: 242 VKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAE 301
Query: 227 KVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHG 286
+++ MM +K + YN+ + + + L M S G PN ++ L++G
Sbjct: 302 RLVLMMHDK-KLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNG 360
Query: 287 YCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPN 346
C G + EA +++ ++ + Y TL+ G + + E+ E + G++P
Sbjct: 361 LCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPG 420
Query: 347 FTTMKKLVTGLVGVSKTDDAKELIKQV 373
T ++L L V++ +A+ LI V
Sbjct: 421 ATICERLADSLFEVNR-KEAQMLITIV 446
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 5/157 (3%)
Query: 204 PNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKA 263
P+ + ++ + F +EE + M G+ P ST+ + + L+R + K
Sbjct: 227 PDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKE 286
Query: 264 LLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLC 323
+ +I+ G N V S L+ Y G++ EA++VF M K+ S + L C
Sbjct: 287 IHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKK----NSVSWSALLGGYC 342
Query: 324 EGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGV 360
+ G+ E A EI +E M++ + F T+ K GL V
Sbjct: 343 QNGEHEKAIEIFRE-MEEKDLYCFGTVLKACAGLAAV 378
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 81/169 (47%), Gaps = 4/169 (2%)
Query: 205 NAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKAL 264
N+ +S G+ ++ FE++ + E KY P + N + SLC+ + A
Sbjct: 290 NSSIYSKITIGYNEKQDFEDLLSFIG--EVKY--EPDVFVGNRILHSLCRRFGSERAYVY 345
Query: 265 LQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCE 324
++ + G K + V+F LI C+EG++ A +++ +GYKP+ Y + L
Sbjct: 346 MEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFR 405
Query: 325 GGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
G ++ I E + G + + +T K +VTG + ++AK ++ ++
Sbjct: 406 KGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKM 454
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 173 TYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMM 232
Y+ +IK ++ G+ +L+ M +N P + ++ + I G ++ ++ K +
Sbjct: 1050 NYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLL---RYNQLDKAMDFH 1106
Query: 233 EE--KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWE 290
E + G+SP++ST++ + C+ + E++ L++ M+ G P+ F +I + E
Sbjct: 1107 TEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVE 1166
Query: 291 GNLDEAKKVFADMKKRGYKPESPCYFTL 318
N +A ++ M+K GY+ + +++L
Sbjct: 1167 KNTVKASEMMEMMQKCGYEVDFETHWSL 1194
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 17/201 (8%)
Query: 138 LNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEM 197
LNALL + K+ ++ D PK D+ ++NT++ G + S M
Sbjct: 353 LNALLDMYAKCGNLKKAFDVFNDIPKK-----DLVSWNTMLHGLGVHGHGKEAIELFSRM 407
Query: 198 DRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKR 257
R +RP+ VTF + +E ME+ Y + P + Y + L ++ R
Sbjct: 408 RREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGR 467
Query: 258 TSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPC--- 314
EA ++Q M +PN V + L+ +D AK+V ++ K PC
Sbjct: 468 LKEAIKVVQTM---PMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKL-----DPCDPG 519
Query: 315 -YFTLAHFLCEGGDFESAFEI 334
Y L++ D+E +I
Sbjct: 520 NYSLLSNIYAAAEDWEGVADI 540
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 109/262 (41%), Gaps = 12/262 (4%)
Query: 117 NAVTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNT 176
A+ R+ DE V NA++ D K ++ P+ +V ++ T
Sbjct: 131 GALCCARRVFDEMS-KRDVPVWNAMITGYQRRGDMKAAMELFDSMPRK-----NVTSWTT 184
Query: 177 VIKSFAESGSTSSVYSILSEMDRN-SVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEK 235
VI F+++G+ S + M+++ SV+PN +T + + + + E +G+ L+ +
Sbjct: 185 VISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELE-IGRRLEGYARE 243
Query: 236 YGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDE 295
G + N I K AK L + + G + N S++ +I G DE
Sbjct: 244 NGFFDNIYVCNATIEMYSKCGMIDVAKRLFEEL---GNQRNLCSWNSMIGSLATHGKHDE 300
Query: 296 AKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWV-PNFTTMKKLV 354
A +FA M + G KP++ + L GG E+ K + + P ++
Sbjct: 301 ALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMI 360
Query: 355 TGLVGVSKTDDAKELIKQVKEK 376
L V K +A +LIK + K
Sbjct: 361 DLLGRVGKLQEAYDLIKTMPMK 382
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 86/207 (41%), Gaps = 5/207 (2%)
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL 229
D+ ++NT++ ++++G ++ M +++P+ +T + + S + VGK +
Sbjct: 200 DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAV-SALRLISVGKEI 258
Query: 230 KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW 289
+ G ++ + K A+ L GM+ + N VS++ +I Y
Sbjct: 259 HGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGML----ERNVVSWNSMIDAYVQ 314
Query: 290 EGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTT 349
N EA +F M G KP H + GD E I K S++ G N +
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSV 374
Query: 350 MKKLVTGLVGVSKTDDAKELIKQVKEK 376
+ L++ + D A + +++ +
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQSR 401
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 71/142 (50%), Gaps = 7/142 (4%)
Query: 175 NTVIKSF---AESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV-LK 230
N +K F ++ G T + S++ + P+ V + +E + + + +E KV ++
Sbjct: 198 NEAVKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMR 257
Query: 231 MMEEKYGMSPALSTYNVRILSLCKLKRT-SEAKALLQGMISGGRKPNWVSFSHLIHGYCW 289
M+ G+SP TY+V I L +T +AK L M+ G PN +++ + +
Sbjct: 258 MLAS--GVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVR 315
Query: 290 EGNLDEAKKVFADMKKRGYKPE 311
EG + A+++ +MK +G+ P+
Sbjct: 316 EGKEESARELLQEMKGKGFVPD 337
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 122 FTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSF 181
F +MR E +VK +AL + + S+I K+ + PDV + +++++
Sbjct: 188 FHKMRTEGFTNEAVKMFDALSKDGRTHEALELFSQI-----KDKNRMPDVVAHTAIVEAY 242
Query: 182 AESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGK--VLKMMEEKYGMS 239
A +G + M + V PNA T+S I+G ++ K + K +L+MM GMS
Sbjct: 243 ANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGN--GMS 300
Query: 240 PALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPN 276
P +TY + + + A+ LLQ M G P+
Sbjct: 301 PNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPD 337
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 1/127 (0%)
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
+L K RT EA L + R P+ V+ + ++ Y G E KVF M G P
Sbjct: 206 ALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSP 265
Query: 311 ESPCYFTLAHFL-CEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKEL 369
+ Y L L +G + A + E M G PN T + V K + A+EL
Sbjct: 266 NAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESAREL 325
Query: 370 IKQVKEK 376
++++K K
Sbjct: 326 LQEMKGK 332
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 2/151 (1%)
Query: 173 TYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMM 232
TY T++ F E+G S+YS+ M V + VT+++ I S + ++ + M
Sbjct: 124 TYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEM 183
Query: 233 EEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGN 292
+ G P + +Y + L R EA + + M+ PN +++ L+ G
Sbjct: 184 RDN-GCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGK 242
Query: 293 LDEAKKVFADMKKRGYKPE-SPCYFTLAHFL 322
+EA +F M++ G +P+ + C +A L
Sbjct: 243 CEEALDIFFKMQEIGVQPDKAACNILIAKAL 273
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 111/264 (42%), Gaps = 11/264 (4%)
Query: 127 DEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGS 186
D + PS + L++A + Y +Y + +S + + N +I ++
Sbjct: 338 DSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFS-EISLSVCNHLIWLMGKAKK 396
Query: 187 TSSVYSILSEMDRNSVRPNAVTFSNAIEGF------YSEKKFEEVG-KVLKMMEEKYGMS 239
+ I ++ PN +++ + F S++ G ++L ME+K G+
Sbjct: 397 WWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDK-GLK 455
Query: 240 PALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNL-DEAKK 298
P +N +++ K T+ A + + M+ G KP +S+ L+ +G L DEA +
Sbjct: 456 PQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALE-KGKLYDEAFR 514
Query: 299 VFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLV 358
V+ M K G +P Y T+A L F + KE KG P+ T +++G
Sbjct: 515 VWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCA 574
Query: 359 GVSKTDDAKELIKQVKEKFTESSD 382
+ A E ++K + E ++
Sbjct: 575 RNGLSGVAYEWFHRMKSENVEPNE 598
>AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 90/201 (44%), Gaps = 5/201 (2%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
I PS+ + L+ D + +I L+ K+ ++ D +T + ++ +G
Sbjct: 294 IKPSLLTYKILIDVKGATNDISGMEQI-LETMKDEGVELDFQTQALTARHYSGAGLKDKA 352
Query: 191 YSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRIL 250
+L EM+ S+ N F + + + S + +EV ++ K+ E K +L+ I
Sbjct: 353 EKVLKEMEGESLEANRRAFKDLLSIYASLGREDEVKRIWKICESKPYFEESLAA----IQ 408
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
+ KL + EA+A+ + ++ R+ + ++S L+ Y L + K + M + G +
Sbjct: 409 AFGKLNKVQEAEAIFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRI 468
Query: 311 ESPCYFTLAHFLCEGGDFESA 331
E+ + L E G+ E A
Sbjct: 469 EATTWDALIKLYVEAGEVEKA 489
>AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 90/201 (44%), Gaps = 5/201 (2%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
I PS+ + L+ D + +I L+ K+ ++ D +T + ++ +G
Sbjct: 294 IKPSLLTYKILIDVKGATNDISGMEQI-LETMKDEGVELDFQTQALTARHYSGAGLKDKA 352
Query: 191 YSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRIL 250
+L EM+ S+ N F + + + S + +EV ++ K+ E K +L+ I
Sbjct: 353 EKVLKEMEGESLEANRRAFKDLLSIYASLGREDEVKRIWKICESKPYFEESLAA----IQ 408
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
+ KL + EA+A+ + ++ R+ + ++S L+ Y L + K + M + G +
Sbjct: 409 AFGKLNKVQEAEAIFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRI 468
Query: 311 ESPCYFTLAHFLCEGGDFESA 331
E+ + L E G+ E A
Sbjct: 469 EATTWDALIKLYVEAGEVEKA 489
>AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 90/201 (44%), Gaps = 5/201 (2%)
Query: 131 ITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSV 190
I PS+ + L+ D + +I L+ K+ ++ D +T + ++ +G
Sbjct: 294 IKPSLLTYKILIDVKGATNDISGMEQI-LETMKDEGVELDFQTQALTARHYSGAGLKDKA 352
Query: 191 YSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRIL 250
+L EM+ S+ N F + + + S + +EV ++ K+ E K +L+ I
Sbjct: 353 EKVLKEMEGESLEANRRAFKDLLSIYASLGREDEVKRIWKICESKPYFEESLAA----IQ 408
Query: 251 SLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKP 310
+ KL + EA+A+ + ++ R+ + ++S L+ Y L + K + M + G +
Sbjct: 409 AFGKLNKVQEAEAIFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRI 468
Query: 311 ESPCYFTLAHFLCEGGDFESA 331
E+ + L E G+ E A
Sbjct: 469 EATTWDALIKLYVEAGEVEKA 489
>AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11605156-11610651 FORWARD
LENGTH=843
Length = 843
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 103/280 (36%), Gaps = 80/280 (28%)
Query: 95 DLRNERFLSQSIVLYGQARMLPN-----AVTAFTRMRDEFQITPSVKS------------ 137
D R + + S +++ A +PN A+ F ++ +E I PS S
Sbjct: 348 DCRKDGVETVSNLIFSYATCIPNSTVEDAIFKFNKLHEELDIVPSSTSYENLVSYLCGSN 407
Query: 138 -----------------------LNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETY 174
L++LL A ++ V RIY N S++P+ ET+
Sbjct: 408 EVVTALDIVENMCEAGLVISANILHSLLQAIEQILEFNLVQRIY-SIMSNKSVKPNSETF 466
Query: 175 NTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEE 234
I Y++L + ++ PN+ +++ + G++ EKK KVLK M+E
Sbjct: 467 RKSINLCIRIKDFEGAYNMLGNLKNFNLAPNSSMYNSIMAGYFREKKVNSALKVLKEMKE 526
Query: 235 KYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCWEGNLD 294
KP+ V+FS+LI+ YC G
Sbjct: 527 ------------------------------------ADVKPDSVTFSYLIN-YC--GEEA 547
Query: 295 EAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEI 334
K + +MK+ G + Y +L G FE A ++
Sbjct: 548 TIAKYYKEMKQAGVEVNKHVYMSLVKAYASCGQFEKAKQV 587
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 94/218 (43%), Gaps = 9/218 (4%)
Query: 163 KNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKF 222
KN+++ P+ YN+++ + +S +L EM V+P++VTFS I E
Sbjct: 490 KNFNLAPNSSMYNSIMAGYFREKKVNSALKVLKEMKEADVKPDSVTFSYLINYCGEEAT- 548
Query: 223 EEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSH 282
+ K K M++ G+ Y + + + +AK +L + + N + S
Sbjct: 549 --IAKYYKEMKQA-GVEVNKHVYMSLVKAYASCGQFEKAKQVLMDLEVPAKDHNELK-SV 604
Query: 283 LIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMD-K 341
LI GN+ EA ++ +MKK E +L + + E+T E D K
Sbjct: 605 LISALASNGNITEALSIYEEMKKLRCPVEPKAILSLIENSDSNAELGTLVELTHELRDSK 664
Query: 342 GWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTE 379
W+ F K++ V +++ +L++Q K ++
Sbjct: 665 FWIDGFF---KIIVFAVRNNRSSSILDLLEQTKNHLSK 699
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/378 (19%), Positives = 161/378 (42%), Gaps = 28/378 (7%)
Query: 10 RRYSTILSPNSSTPLTAKEKSRTALHLLKSETNPERILDICRAAS----LTPDFHLDRIA 65
R +ST L+P + TP+ R L + + +P+ L + + +S LT +F L ++
Sbjct: 27 RFFSTELTPTTITPINQDHLLRVCTILYQQQNSPDSRL-VSKLSSTKFQLTHEFFL-QVC 84
Query: 66 LSVAISKLKDGNHFSTIDQFLRDLPTSRPDLRNERFLSQSIV-LYGQARMLPNAVTAFTR 124
+ +S + + +F T PD + S ++ + G +R + F
Sbjct: 85 NNFPLS-------WRPVHRFFLYSQTHHPDFTHTSTTSNKMLAIIGNSRNMD----LFWE 133
Query: 125 MRDEFQITPSV--KSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFA 182
+ E V K+ +L A++ K+ Y + +VET N +++
Sbjct: 134 LAQEIGKRGLVNDKTFRIVLKTLASARELKKCVN-YFHLMNGFGYLYNVETMNRGVETLC 192
Query: 183 ESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPAL 242
+ + ++ + ++P+ +T+ I+GF E K+ +M ++ G +
Sbjct: 193 KEKLVEEAKFVFIKL-KEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDE-GFDVDI 250
Query: 243 STYNVRILSLCKLKRTSEAKALLQGMISG-GRKPNWVSFSHLIHGYCWEGNLDEAKKVFA 301
+ +L K + EA + M+S G + + +I C G +D A+KVF
Sbjct: 251 EAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFD 310
Query: 302 DMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVS 361
+M++RG ++ + +L + L A+ + E ++ P+ + L+ GLV +
Sbjct: 311 EMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLV-EGVEN---PDISIYHGLIKGLVKIK 366
Query: 362 KTDDAKELIKQVKEKFTE 379
+ +A E+ +++ ++ E
Sbjct: 367 RASEATEVFRKMIQRGCE 384
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 73/175 (41%), Gaps = 9/175 (5%)
Query: 224 EVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHL 283
EV KVL ME + G+ T+NV I +LCK++RT EA L M G +P+ ++ L
Sbjct: 305 EVEKVLLEMEFR-GVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVL 363
Query: 284 IHGYCWEGNLDEAKKVFADMKKRGY-----KPESPCYFTLAHFLCEGGDFESAFEITKES 338
I + E ++ MK GY K E Y+ LC E A + K
Sbjct: 364 IRSLYQAARIGEGDEMIDKMKSAGYGELLNKKE---YYGFLKILCGIERLEHAMSVFKSM 420
Query: 339 MDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQVKEKFTESSDKWDEIEAELIK 393
G P T L+ + ++ A L K+ +K S K ++ +K
Sbjct: 421 KANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYRVDPRFMK 475
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 93/209 (44%), Gaps = 10/209 (4%)
Query: 114 MLPNA--VTAFTRMRDEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQP-- 169
MLP + A R V L+ + + + Y + RI L +++ P
Sbjct: 394 MLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLS-QIVFNMMPTK 452
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL 229
++ +N+++ F+ G V SI + R ++P+ ++F++ + +E K
Sbjct: 453 NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYF 512
Query: 230 KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW 289
KMM E+YG+ P L Y+ + L + + EA L++ M +P+ + L++
Sbjct: 513 KMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEM---PFEPDSCVWGALLNSCRL 569
Query: 290 EGNLDEAKKVFADMKKRGYKPESPCYFTL 318
+ N+D A+ A K +PE+P + L
Sbjct: 570 QNNVDLAE--IAAEKLFHLEPENPGTYVL 596
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 5/167 (2%)
Query: 167 IQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVG 226
++ DV ++ ++I + +S +S+ SE+ + RPN TF+ + ++ EE+G
Sbjct: 280 VEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNAC-ADLTTEELG 338
Query: 227 KVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHG 286
K + + G P Y+ SL + + ++ G KP+ VS++ LI G
Sbjct: 339 KQVHGYMTRVGFDP----YSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGG 394
Query: 287 YCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFE 333
G DEA K F + K G KP+ + + G E E
Sbjct: 395 CAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLE 441
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 114/290 (39%), Gaps = 21/290 (7%)
Query: 87 RDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITP--SVKSLNALLFA 144
R+L P+ RNE + + Y Q + A ++ F + P +V + N ++
Sbjct: 301 RELFDKMPE-RNEVSWNAMLAGYVQGERMEMA-------KELFDVMPCRNVSTWNTMITG 352
Query: 145 ALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRP 204
E ++ PK D ++ +I +++SG + + +M+R R
Sbjct: 353 YAQCGKISEAKNLFDKMPKR-----DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRL 407
Query: 205 NAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKAL 264
N +FS+A+ ++ E+GK L K G N +L CK EA L
Sbjct: 408 NRSSFSSALSTC-ADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDL 466
Query: 265 LQGMISGGRKPNWVSFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCE 324
+ M + VS++ +I GY G + A + F MK+ G KP+ +
Sbjct: 467 FKEMAG----KDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSH 522
Query: 325 GGDFESAFE-ITKESMDKGWVPNFTTMKKLVTGLVGVSKTDDAKELIKQV 373
G + + + D G +PN +V L +DA L+K +
Sbjct: 523 TGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 572
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 29/211 (13%)
Query: 165 YSIQP--DVETYNTVIKSFAESGSTSSVYSILSEM-DRNSVRPNAVTFSNAIEGFYSEKK 221
+ I P DV ++NT++ +A++G S+ M ++N V NA+ + + K
Sbjct: 149 FEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNAL-----LSAYVQNSK 203
Query: 222 FEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFS 281
EE + K E + AL ++N + K K+ EA+ M + VS++
Sbjct: 204 MEEACMLFKSRE-----NWALVSWNCLLGGFVKKKKIVEARQFFDSM----NVRDVVSWN 254
Query: 282 HLIHGYCWEGNLDEAKKVFADMKKRGYKPESPC--YFTLAHFLCEGGDFESAFEITKESM 339
+I GY G +DEA+++F ESP FT + G E +E
Sbjct: 255 TIITGYAQSGKIDEARQLF---------DESPVQDVFTWTAMV-SGYIQNRMVEEARELF 304
Query: 340 DKGWVPNFTTMKKLVTGLVGVSKTDDAKELI 370
DK N + ++ G V + + AKEL
Sbjct: 305 DKMPERNEVSWNAMLAGYVQGERMEMAKELF 335
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/250 (18%), Positives = 103/250 (41%), Gaps = 3/250 (1%)
Query: 127 DEFQITPSVKSLNALLFAALIAKDYKEVSRIYLDFPKNYSIQPDVETYNTVIKSFAESGS 186
DE S+ + L+ ++V RI +N I PD+ T ++ +++SG+
Sbjct: 376 DEKSFNASISDYSKLIHIHAKENHIEDVERILKKMSQN-GIFPDILTATALVHMYSKSGN 434
Query: 187 TSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYN 246
+ +RP+ + I G+ + K + +++K M+ K + + Y
Sbjct: 435 FERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKE-LKASEEVYM 493
Query: 247 VRILSLCKLKRTSEAKALLQGMISGGRKP-NWVSFSHLIHGYCWEGNLDEAKKVFADMKK 305
+ + ++ + A + M P ++ ++S + Y G +D+AK F +M+K
Sbjct: 494 ALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRK 553
Query: 306 RGYKPESPCYFTLAHFLCEGGDFESAFEITKESMDKGWVPNFTTMKKLVTGLVGVSKTDD 365
G+KP+ C L + A + + G T LV + + ++
Sbjct: 554 LGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEE 613
Query: 366 AKELIKQVKE 375
A++L+ ++ +
Sbjct: 614 AEQLLVKISQ 623
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 98/219 (44%), Gaps = 6/219 (2%)
Query: 159 LDFPKNYSIQPDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYS 218
L+ K +I P +YN+++ + ++G T V +++ E+ +V P++ T++ + +
Sbjct: 146 LNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAA 205
Query: 219 EKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWV 278
V +V++ M ++P +TY+ + +A+ LQ + + ++
Sbjct: 206 TNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDFT 265
Query: 279 SFSHLIHGYCWEGNLDEAKKVFADMKKRGYKPESPCYFTLAHFLCEGGDFESAFEITKES 338
++ LI Y G L E +++ ++ K + Y + L + D A E+
Sbjct: 266 AYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGA-----ET 320
Query: 339 MDKGWVPNFTTMK-KLVTGLVGVSKTDDAKELIKQVKEK 376
+ K W N +T ++V L+G + + ++KEK
Sbjct: 321 LFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEK 359
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 138 LNALLFAALIAKDYKEVSRIYLDFPKNYSIQ-PDVETYNTVIKSFAESGSTSSVYSILSE 196
LNA+L +AL+ Y + I YS++ DV +N +I FA G + + SE
Sbjct: 198 LNAILSSALV-DVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSE 256
Query: 197 MDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVLKMMEEKYGMSPALSTYNVRILSLCKLK 256
M+ V P+++TF + EE + +M ++ + P L Y + L +
Sbjct: 257 MEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAG 316
Query: 257 RTSEAKALLQGM 268
R EA L++ M
Sbjct: 317 RVKEAYELIESM 328
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 75/174 (43%), Gaps = 6/174 (3%)
Query: 170 DVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKVL 229
D TY ++I + G ++ EM R+ ++P+ VT + K E ++
Sbjct: 447 DEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLF 506
Query: 230 KMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYCW 289
M+ +YG+ P L ++ + + ++AK ++ M KP+ +++ L++
Sbjct: 507 MKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNM---PYKPSGATWATLLNACHI 563
Query: 290 EGNLDEAKKVFADMKKRGYKPESPCYFTL-AHFLCEGGDFESAFEITKESMDKG 342
GN K +A K KPE+P Y+ L A+ G + E+ D G
Sbjct: 564 HGNTQIGK--WAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLG 615
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 107/270 (39%), Gaps = 39/270 (14%)
Query: 79 FSTIDQFLRDLPTSRPDLRNERFLSQSIVLYGQARMLPNAVTAFTRMRDEFQITPSVKSL 138
FS + L R +R + S V G L N AF F ++P V +
Sbjct: 86 FSDCGKMFYRLDLRRSSIRPWNSIISSFVRNG----LLNQALAFYFKMLCFGVSPDVSTF 141
Query: 139 NALLFAALIAKDYKEVS----------------------RIYLDFPK--------NYSIQ 168
L+ A + K++K + + YL++ K + +Q
Sbjct: 142 PCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQ 201
Query: 169 PDVETYNTVIKSFAESGSTSSVYSILSEMDRNSVRPNAVTFSNAIEGFYSEKKFEEVGKV 228
D +N ++ +A+ G+ SV S M + + PNAVTF + + + K ++G
Sbjct: 202 KDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTF-DCVLSVCASKLLIDLGVQ 260
Query: 229 LKMMEEKYGMSPALSTYNVRILSLCKLKRTSEAKALLQGMISGGRKPNWVSFSHLIHGYC 288
L + G+ S N + K R +A L + M + + V+++ +I GY
Sbjct: 261 LHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMM----SRADTVTWNCMISGYV 316
Query: 289 WEGNLDEAKKVFADMKKRGYKPESPCYFTL 318
G ++E+ F +M G P++ + +L
Sbjct: 317 QSGLMEESLTFFYEMISSGVLPDAITFSSL 346