Miyakogusa Predicted Gene
- Lj6g3v1879850.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1879850.1 Non Chatacterized Hit- tr|I1MR67|I1MR67_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,78.1,0,FAMILY NOT
NAMED,NULL; DUF1084,Domain of unknown function DUF1084;
seg,NULL,CUFF.60026.1
(294 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G21790.1 | Symbols: TOM1, ATTOM1 | tobamovirus multiplication... 421 e-118
AT2G02180.1 | Symbols: TOM3 | tobamovirus multiplication protein... 330 5e-91
AT1G14530.2 | Symbols: THH1 | Protein of unknown function (DUF10... 303 9e-83
AT1G14530.1 | Symbols: THH1 | Protein of unknown function (DUF10... 303 9e-83
AT3G59090.3 | Symbols: | LOCATED IN: endomembrane system; EXPRE... 55 8e-08
AT3G59090.2 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 54 1e-07
AT3G59090.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 54 1e-07
>AT4G21790.1 | Symbols: TOM1, ATTOM1 | tobamovirus multiplication 1
| chr4:11569924-11572163 FORWARD LENGTH=291
Length = 291
Score = 421 bits (1083), Expect = e-118, Method: Compositional matrix adjust.
Identities = 192/269 (71%), Positives = 231/269 (85%)
Query: 26 WWDHISDSTQWQSALFYSLCAAYALISSVALIQLIRIELRVPEYGWTTQKIFHLMNFIVS 85
WWD +++STQWQ +F++LC AYAL+S+VAL+QLIRI++RVPEYGWTTQK+FHLMNF+V+
Sbjct: 23 WWDDVNESTQWQDGIFFALCGAYALVSAVALVQLIRIQMRVPEYGWTTQKVFHLMNFVVN 82
Query: 86 GVRALVFGFHTKVFTLHPKXXXXXXXXXXXXXYFSTYTLLVLFWAEIYHQARSLPTDKLK 145
GVRA++FGFH +VF +HPK +FS YTLLVLFWAEIYHQARSLPTDKL+
Sbjct: 83 GVRAVLFGFHMQVFLVHPKALCWVLLDLPGLLFFSAYTLLVLFWAEIYHQARSLPTDKLR 142
Query: 146 IVYVSVNGVVYFIQVCIWIYIWIDDNSVAELIGQIFIGAVSFIAAIGFLIYGGRLFSMLR 205
I Y+SVN VY Q+ IW YIW+ DNS EL+G+IFI VSFIAA+GFL+YGGRLF MLR
Sbjct: 143 ITYISVNVAVYLAQIGIWAYIWVHDNSTVELVGKIFIAVVSFIAALGFLLYGGRLFFMLR 202
Query: 206 RFPIESKGRRKKLNEVGCVTAICFTCFLIRCLMVFISAFDSDASLDVLDHPILDFIYYML 265
RFPIESKGRRKKL+EVG VTAICFTCFLIRC++V +SAFD D +LDVLDHP+L+ IYYM+
Sbjct: 203 RFPIESKGRRKKLHEVGSVTAICFTCFLIRCVVVAVSAFDKDLTLDVLDHPVLNLIYYMV 262
Query: 266 VEIVPSALVLFILRKLPPKRISAQYHPIR 294
VE++PSALVLFILRKLPPKR+SAQYHPI+
Sbjct: 263 VEVLPSALVLFILRKLPPKRVSAQYHPIQ 291
>AT2G02180.1 | Symbols: TOM3 | tobamovirus multiplication protein 3
| chr2:560976-562961 FORWARD LENGTH=303
Length = 303
Score = 330 bits (847), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 154/269 (57%), Positives = 201/269 (74%)
Query: 26 WWDHISDSTQWQSALFYSLCAAYALISSVALIQLIRIELRVPEYGWTTQKIFHLMNFIVS 85
WW +++S WQ +F+ L Y ++S VA+IQL+RI+LRVPEYGWTTQK+FH +NF+V+
Sbjct: 35 WWSDVNESPIWQDRIFHVLAVLYGIVSLVAVIQLVRIQLRVPEYGWTTQKVFHFLNFVVN 94
Query: 86 GVRALVFGFHTKVFTLHPKXXXXXXXXXXXXXYFSTYTLLVLFWAEIYHQARSLPTDKLK 145
GVRA+VF F V + P+ +F+TY LLVLFWAEIY+QAR++ TD L+
Sbjct: 95 GVRAVVFVFRRNVQFMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYYQARAVSTDGLR 154
Query: 146 IVYVSVNGVVYFIQVCIWIYIWIDDNSVAELIGQIFIGAVSFIAAIGFLIYGGRLFSMLR 205
+ ++N VVY +Q+ +W+ +W V ++ ++F VS AA+GFL+YGGRLF ML+
Sbjct: 155 PSFFTINAVVYVVQIALWLVLWWKPVRVMVILSKMFFAGVSLFAALGFLLYGGRLFLMLQ 214
Query: 206 RFPIESKGRRKKLNEVGCVTAICFTCFLIRCLMVFISAFDSDASLDVLDHPILDFIYYML 265
RFP+ESKGRRKKL EVG VT ICFTCFLIRC+M+ +AFD A+LDVLDHPIL+FIYY+L
Sbjct: 215 RFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFAAFDEGANLDVLDHPILNFIYYLL 274
Query: 266 VEIVPSALVLFILRKLPPKRISAQYHPIR 294
VEI+PS+LVLFILRKLPPKR QYH IR
Sbjct: 275 VEILPSSLVLFILRKLPPKRGITQYHQIR 303
>AT1G14530.2 | Symbols: THH1 | Protein of unknown function (DUF1084)
| chr1:4971420-4973597 REVERSE LENGTH=293
Length = 293
Score = 303 bits (776), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 154/272 (56%), Positives = 199/272 (73%)
Query: 23 GWPWWDHISDSTQWQSALFYSLCAAYALISSVALIQLIRIELRVPEYGWTTQKIFHLMNF 82
G WW +++S WQ +F+ L Y ++S +A+IQL+RI+LRVPEYGWTTQK+FH +NF
Sbjct: 22 GKNWWWDVNESPVWQDRIFHVLAVLYGIVSVIAVIQLVRIQLRVPEYGWTTQKVFHFLNF 81
Query: 83 IVSGVRALVFGFHTKVFTLHPKXXXXXXXXXXXXXYFSTYTLLVLFWAEIYHQARSLPTD 142
+V+GVRALVF F + P+ +F+TY LLVLFWAEIY+QAR++ TD
Sbjct: 82 MVNGVRALVFLFRRDAQNMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYYQARAVSTD 141
Query: 143 KLKIVYVSVNGVVYFIQVCIWIYIWIDDNSVAELIGQIFIGAVSFIAAIGFLIYGGRLFS 202
L+ + ++N VVY IQ+ +W+ +W + +I ++F VS AA+GFL+YGGRLF
Sbjct: 142 GLRPSFFTINAVVYVIQIALWLVLWWKPVHLMVIISKMFFAGVSLFAALGFLLYGGRLFL 201
Query: 203 MLRRFPIESKGRRKKLNEVGCVTAICFTCFLIRCLMVFISAFDSDASLDVLDHPILDFIY 262
ML+RFP+ESKGRRKKL EVG VT ICFTCFLIRC+M+ AFD A LDVLDHPIL+FIY
Sbjct: 202 MLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFDAFDDAADLDVLDHPILNFIY 261
Query: 263 YMLVEIVPSALVLFILRKLPPKRISAQYHPIR 294
Y+LVEI+PS+LVLFILRKLPPKR QYH I+
Sbjct: 262 YLLVEILPSSLVLFILRKLPPKRGITQYHQIQ 293
>AT1G14530.1 | Symbols: THH1 | Protein of unknown function (DUF1084)
| chr1:4971420-4973597 REVERSE LENGTH=293
Length = 293
Score = 303 bits (776), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 154/272 (56%), Positives = 199/272 (73%)
Query: 23 GWPWWDHISDSTQWQSALFYSLCAAYALISSVALIQLIRIELRVPEYGWTTQKIFHLMNF 82
G WW +++S WQ +F+ L Y ++S +A+IQL+RI+LRVPEYGWTTQK+FH +NF
Sbjct: 22 GKNWWWDVNESPVWQDRIFHVLAVLYGIVSVIAVIQLVRIQLRVPEYGWTTQKVFHFLNF 81
Query: 83 IVSGVRALVFGFHTKVFTLHPKXXXXXXXXXXXXXYFSTYTLLVLFWAEIYHQARSLPTD 142
+V+GVRALVF F + P+ +F+TY LLVLFWAEIY+QAR++ TD
Sbjct: 82 MVNGVRALVFLFRRDAQNMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYYQARAVSTD 141
Query: 143 KLKIVYVSVNGVVYFIQVCIWIYIWIDDNSVAELIGQIFIGAVSFIAAIGFLIYGGRLFS 202
L+ + ++N VVY IQ+ +W+ +W + +I ++F VS AA+GFL+YGGRLF
Sbjct: 142 GLRPSFFTINAVVYVIQIALWLVLWWKPVHLMVIISKMFFAGVSLFAALGFLLYGGRLFL 201
Query: 203 MLRRFPIESKGRRKKLNEVGCVTAICFTCFLIRCLMVFISAFDSDASLDVLDHPILDFIY 262
ML+RFP+ESKGRRKKL EVG VT ICFTCFLIRC+M+ AFD A LDVLDHPIL+FIY
Sbjct: 202 MLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFDAFDDAADLDVLDHPILNFIY 261
Query: 263 YMLVEIVPSALVLFILRKLPPKRISAQYHPIR 294
Y+LVEI+PS+LVLFILRKLPPKR QYH I+
Sbjct: 262 YLLVEILPSSLVLFILRKLPPKRGITQYHQIQ 293
>AT3G59090.3 | Symbols: | LOCATED IN: endomembrane system;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1084 (InterPro:IPR009457); BEST
Arabidopsis thaliana protein match is: tobamovirus
multiplication 1 (TAIR:AT4G21790.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants -
531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI
BLink). | chr3:21839380-21842348 FORWARD LENGTH=361
Length = 361
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 154 VVYFIQVCIWIYIWIDDNSV---AELIGQIFI---GAVSFIAAIGFLIYGGRLFSMLRRF 207
+V+ + + I IWI + L+ ++++ A+ I G YG RL LR+
Sbjct: 175 LVFILMISFAILIWIASGKNPMNSSLLAEVYVDIFAAIILITGGGICFYGLRLLFNLRKV 234
Query: 208 PIES-KGRRKKLNEVGCVTAICFTCFLIRCLMVFISAFD--SDASLDVLDHPILDFIYYM 264
E +K++ + V+ +CFT + L+ I F + + L + +L IYY
Sbjct: 235 RSEQVSSEMRKVSGLAGVSVVCFTVSSLIALLTHIPLFYHWNPSKLHGIKALVLLIIYYF 294
Query: 265 LVEIVPSALVLFILRKLPPKRISAQYHPIR 294
+ VP A VL++LR+LPP+ I ++ R
Sbjct: 295 IGSTVPLAFVLWVLRELPPQNIVSRQEDTR 324
>AT3G59090.2 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1084 (InterPro:IPR009457); BEST
Arabidopsis thaliana protein match is: tobamovirus
multiplication 1 (TAIR:AT4G21790.1); Has 198 Blast hits
to 197 proteins in 29 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 2; Plants - 190; Viruses - 0; Other
Eukaryotes - 6 (source: NCBI BLink). |
chr3:21839334-21842449 FORWARD LENGTH=373
Length = 373
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 154 VVYFIQVCIWIYIWIDDNSV---AELIGQIFI---GAVSFIAAIGFLIYGGRLFSMLRRF 207
+V+ + + I IWI + L+ ++++ A+ I G YG RL LR+
Sbjct: 181 LVFILMISFAILIWIASGKNPMNSSLLAEVYVDIFAAIILITGGGICFYGLRLLFNLRKV 240
Query: 208 PIES-KGRRKKLNEVGCVTAICFTCFLIRCLMVFISAFD--SDASLDVLDHPILDFIYYM 264
E +K++ + V+ +CFT + L+ I F + + L + +L IYY
Sbjct: 241 RSEQVSSEMRKVSGLAGVSVVCFTVSSLIALLTHIPLFYHWNPSKLHGIKALVLLIIYYF 300
Query: 265 LVEIVPSALVLFILRKLPPKRISAQYHPIR 294
+ VP A VL++LR+LPP+ I ++ R
Sbjct: 301 IGSTVPLAFVLWVLRELPPQNIVSRQEDTR 330
>AT3G59090.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1084 (InterPro:IPR009457); BEST
Arabidopsis thaliana protein match is: tobamovirus
multiplication 1 (TAIR:AT4G21790.1); Has 196 Blast hits
to 195 proteins in 29 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 2; Plants - 188; Viruses - 0; Other
Eukaryotes - 6 (source: NCBI BLink). |
chr3:21839334-21842348 FORWARD LENGTH=367
Length = 367
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 154 VVYFIQVCIWIYIWIDDNSV---AELIGQIFI---GAVSFIAAIGFLIYGGRLFSMLRRF 207
+V+ + + I IWI + L+ ++++ A+ I G YG RL LR+
Sbjct: 181 LVFILMISFAILIWIASGKNPMNSSLLAEVYVDIFAAIILITGGGICFYGLRLLFNLRKV 240
Query: 208 PIES-KGRRKKLNEVGCVTAICFTCFLIRCLMVFISAFD--SDASLDVLDHPILDFIYYM 264
E +K++ + V+ +CFT + L+ I F + + L + +L IYY
Sbjct: 241 RSEQVSSEMRKVSGLAGVSVVCFTVSSLIALLTHIPLFYHWNPSKLHGIKALVLLIIYYF 300
Query: 265 LVEIVPSALVLFILRKLPPKRISAQYHPIR 294
+ VP A VL++LR+LPP+ I ++ R
Sbjct: 301 IGSTVPLAFVLWVLRELPPQNIVSRQEDTR 330