Miyakogusa Predicted Gene

Lj6g3v1878790.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1878790.1 Non Chatacterized Hit- tr|I1MFG6|I1MFG6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23091
PE,89.18,0,seg,NULL; zf-MYND,Zinc finger, MYND-type; HIT/MYND zinc
finger-like,NULL; ZF_MYND_1,Zinc finger, MYN,CUFF.60021.1
         (601 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G21890.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   274   1e-73
AT1G70150.1 | Symbols:  | zinc ion binding | chr1:26416898-26419...   153   3e-37

>AT4G21890.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: nucleus;
           EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7
           growth stages; Has 14 Blast hits to 14 proteins in 5
           species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
           0; Plants - 14; Viruses - 0; Other Eukaryotes - 0
           (source: NCBI BLink). | chr4:11611874-11612674 REVERSE
           LENGTH=266
          Length = 266

 Score =  274 bits (701), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 135/223 (60%), Positives = 165/223 (73%), Gaps = 3/223 (1%)

Query: 1   MKVDGIAPNFIRSIYKASAALYRAEPWKRLRPGHFFGVRVGKDSDWNGKKQPFPCVQXXX 60
           M V+GI+ N I+SI++ASA+LY +EPWKRLRPGH FGVRVGKDSDW+GK+QPF CVQ   
Sbjct: 31  MIVEGISSNIIQSIFRASASLYSSEPWKRLRPGHLFGVRVGKDSDWSGKRQPFQCVQFIG 90

Query: 61  XXXXXXXXYMFRSESDAKKMTGPR--ETVRVPNVELLRVTYEKESMMFPSNRKMIKSLSL 118
                   YM+RS S A KMT     E  R PNVE+ RVTYE ES+M PSN++M+KSLSL
Sbjct: 91  GDGGDIAIYMYRSMSYALKMTDGDSWEMARDPNVEVFRVTYELESLMLPSNKRMVKSLSL 150

Query: 119 EASGMDRFPVIDVARCTISGELRFRNPTLEELKFVYGFMKAISLVHSLLQVDREIGSKYS 178
           E SG DRFP++DVARC  SGEL+FR+PTLEEL+ V+  MKA+SLVH LL  + +      
Sbjct: 151 EVSGTDRFPIMDVARCMTSGELQFRSPTLEELRLVFAVMKALSLVHPLLLQEEKQVRGLP 210

Query: 179 TAVNFEHFIETVDVQWPPEVTKGGYDLVAVTISHPPGQAYDDK 221
             + F  FIETVDVQWP E+ K G+D VAVT+SHPPGQ+Y+ K
Sbjct: 211 RMIKFSPFIETVDVQWPSEMGK-GHDFVAVTVSHPPGQSYEQK 252


>AT1G70150.1 | Symbols:  | zinc ion binding | chr1:26416898-26419521
           FORWARD LENGTH=374
          Length = 374

 Score =  153 bits (386), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 169/382 (44%), Gaps = 81/382 (21%)

Query: 272 CGRCRAVIYCSSICQKQHWSEAHKSLCGLYKAMMEREEELTIKIFLFPCSA--------D 323
           CG+C AV YCS   Q  HWS  HK  C   +  M R + L    F F   A        +
Sbjct: 20  CGQCGAVAYCSVSHQISHWS-YHKEECERLEEQMRRVDLLNDFPFTFTEEATIQVSQKHE 78

Query: 324 QPCKWLESLGIHQKGMWSRKCSCNS-----------HCPLGLLPVKGGLRELWGELDDYE 372
             C +    G+H+ GMW  +C+C +           H P    P +G L  +  +L    
Sbjct: 79  TRCSFFIKRGLHRVGMWMYECNCGALAFDSFNIEGWHLPSSSCPCRGPLSPITKQL---- 134

Query: 373 YPHDXXXXXXXXXXXXXXXGWSEYYTLRSLPLSSPVADILSHPLTVYHILTTLNISSKNL 432
                               W +Y+  R LPL SPVA +L  PLT+YH +  + +   NL
Sbjct: 135 ------------------CTWKDYFEWRKLPLDSPVALLLHWPLTIYHAVQAIGMG--NL 174

Query: 433 ILQ-GKEVIVHYLGPEGELDWMPAFAEVGHLLNGLGNVQIVMVGPEVPTNL--------- 482
             Q   E+ +HYLGP+ EL  +  FAE+  L  GL  + + ++GP+VP ++         
Sbjct: 175 TPQISDELRIHYLGPQKELGQLGVFAELQALFPGL-RIYVDLIGPDVPQHMDGEMISLCR 233

Query: 483 -------------------SGTTSGIGSRVRVNLVRGIYQ-----VEASYLPSPHVVIAL 518
                              SG+   + S V + L RG Y      +     P PH+VIA 
Sbjct: 234 YSPCMGKECECKNSSKILNSGSKPALVSAVSLQLRRGFYHDRYNDITKDSFP-PHIVIAP 292

Query: 519 NSKLESYSTWGGALDLIKSMDVPAFFTDQSEVSCVNAKQVLRN-AGLHITQPVTPNPFRS 577
           N+ + +Y +W   ++LIK + VPA F+D  E +C  A   ++   G  ++ P+  NPFR 
Sbjct: 293 NAGIAAYPSWLPTIELIKEIQVPAVFSDYCEEACHLAACCIKTITGQPLSSPIELNPFRQ 352

Query: 578 PVKNLTPSSNLPSYSNGFVFGV 599
           P+     +  +P YSN F+F +
Sbjct: 353 PMAVEESTLFIPCYSNCFIFAM 374