Miyakogusa Predicted Gene
- Lj6g3v1878750.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1878750.1 Non Chatacterized Hit- tr|I3SKL8|I3SKL8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,36.05,0.0000005,seg,NULL,CUFF.60034.1
(256 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G61900.2 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 250 5e-67
AT1G61900.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 250 6e-67
AT1G61900.3 | Symbols: | unknown protein; BEST Arabidopsis thal... 250 7e-67
AT2G30700.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 142 3e-34
>AT1G61900.2 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: anchored to
plasma membrane, plasma membrane, anchored to membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G30700.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants -
531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI
BLink). | chr1:22882561-22884722 REVERSE LENGTH=413
Length = 413
Score = 250 bits (639), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 120/203 (59%), Positives = 158/203 (77%), Gaps = 8/203 (3%)
Query: 28 NTSIPKLSGLCTLNFTTAESLLSVTAVDCWEGFAPFLANVICCPQLEATLTILIGQSSKF 87
N+++PKLSGLC+LNF+ +ESL+ T+ +CW FAP LANV+CCPQL+ATLTI++G++SK
Sbjct: 59 NSTMPKLSGLCSLNFSASESLIQTTSHNCWTVFAPLLANVMCCPQLDATLTIILGKASKE 118
Query: 88 TDALALNSTVAKHCLSDVEQILMGQGGTGDLKHVCSVHPLNLTEAACPVKNVNDFNDIVD 147
T LALN T +KHCLSD+EQIL+G+G +G L +CS+H NLT ++CPV NV++F VD
Sbjct: 119 TGLLALNRTQSKHCLSDLEQILVGKGASGQLNKICSIHSSNLTSSSCPVINVDEFESTVD 178
Query: 148 TSKLLTACEKIDPVKECCYQICQNAILEAATTIASKGSDFWDMDASHVLPEHSIRVNDCR 207
T+KLL ACEKIDPVKECC + CQNAIL+AAT I+ K AS L ++S R+NDC+
Sbjct: 179 TAKLLLACEKIDPVKECCEEACQNAILDAATNISLK--------ASETLTDNSDRINDCK 230
Query: 208 NIVLRWVASKLDPSHAKKVLRKL 230
N+V RW+A+KLDPS K+ LR L
Sbjct: 231 NVVNRWLATKLDPSRVKETLRGL 253
>AT1G61900.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: anchored to
plasma membrane, plasma membrane, anchored to membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G30700.1); Has 65 Blast
hits to 65 proteins in 12 species: Archae - 0; Bacteria
- 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0;
Other Eukaryotes - 0 (source: NCBI BLink). |
chr1:22882508-22884722 REVERSE LENGTH=433
Length = 433
Score = 250 bits (639), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 120/203 (59%), Positives = 158/203 (77%), Gaps = 8/203 (3%)
Query: 28 NTSIPKLSGLCTLNFTTAESLLSVTAVDCWEGFAPFLANVICCPQLEATLTILIGQSSKF 87
N+++PKLSGLC+LNF+ +ESL+ T+ +CW FAP LANV+CCPQL+ATLTI++G++SK
Sbjct: 59 NSTMPKLSGLCSLNFSASESLIQTTSHNCWTVFAPLLANVMCCPQLDATLTIILGKASKE 118
Query: 88 TDALALNSTVAKHCLSDVEQILMGQGGTGDLKHVCSVHPLNLTEAACPVKNVNDFNDIVD 147
T LALN T +KHCLSD+EQIL+G+G +G L +CS+H NLT ++CPV NV++F VD
Sbjct: 119 TGLLALNRTQSKHCLSDLEQILVGKGASGQLNKICSIHSSNLTSSSCPVINVDEFESTVD 178
Query: 148 TSKLLTACEKIDPVKECCYQICQNAILEAATTIASKGSDFWDMDASHVLPEHSIRVNDCR 207
T+KLL ACEKIDPVKECC + CQNAIL+AAT I+ K AS L ++S R+NDC+
Sbjct: 179 TAKLLLACEKIDPVKECCEEACQNAILDAATNISLK--------ASETLTDNSDRINDCK 230
Query: 208 NIVLRWVASKLDPSHAKKVLRKL 230
N+V RW+A+KLDPS K+ LR L
Sbjct: 231 NVVNRWLATKLDPSRVKETLRGL 253
>AT1G61900.3 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G30700.1). | chr1:22882508-22884722 REVERSE
LENGTH=429
Length = 429
Score = 250 bits (638), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 120/203 (59%), Positives = 158/203 (77%), Gaps = 8/203 (3%)
Query: 28 NTSIPKLSGLCTLNFTTAESLLSVTAVDCWEGFAPFLANVICCPQLEATLTILIGQSSKF 87
N+++PKLSGLC+LNF+ +ESL+ T+ +CW FAP LANV+CCPQL+ATLTI++G++SK
Sbjct: 59 NSTMPKLSGLCSLNFSASESLIQTTSHNCWTVFAPLLANVMCCPQLDATLTIILGKASKE 118
Query: 88 TDALALNSTVAKHCLSDVEQILMGQGGTGDLKHVCSVHPLNLTEAACPVKNVNDFNDIVD 147
T LALN T +KHCLSD+EQIL+G+G +G L +CS+H NLT ++CPV NV++F VD
Sbjct: 119 TGLLALNRTQSKHCLSDLEQILVGKGASGQLNKICSIHSSNLTSSSCPVINVDEFESTVD 178
Query: 148 TSKLLTACEKIDPVKECCYQICQNAILEAATTIASKGSDFWDMDASHVLPEHSIRVNDCR 207
T+KLL ACEKIDPVKECC + CQNAIL+AAT I+ K AS L ++S R+NDC+
Sbjct: 179 TAKLLLACEKIDPVKECCEEACQNAILDAATNISLK--------ASETLTDNSDRINDCK 230
Query: 208 NIVLRWVASKLDPSHAKKVLRKL 230
N+V RW+A+KLDPS K+ LR L
Sbjct: 231 NVVNRWLATKLDPSRVKETLRGL 253
>AT2G30700.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G61900.1); Has 68 Blast hits to 67 proteins in
13 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi
- 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr2:13082033-13084384 REVERSE
LENGTH=480
Length = 480
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 113/204 (55%), Gaps = 3/204 (1%)
Query: 28 NTSIPKLSGLCTLNFTTAESLLSVTAVDCWEGFAPFLANVICCPQLEATLTILIGQSSKF 87
+T PKL+G C +F S++ A DC + FA + NVICCPQ + L I GQ +
Sbjct: 95 DTYEPKLTGKCPTDFQAISSVIDTAASDCSQPFAALVGNVICCPQFVSLLHIFQGQHNVK 154
Query: 88 TDALALNSTVAKHCLSDVEQILMGQGGTGDLKHVCSVHPLNLTEAACPVKNVNDFNDIVD 147
++ L L VA C SD+ IL+ + + +CSV NLT +CPV +V F +V+
Sbjct: 155 SNKLVLPDAVATDCFSDIVSILVSRRANMTIPALCSVTSSNLTGGSCPVTDVTTFEKVVN 214
Query: 148 TSKLLTACEKIDPVKECCYQICQNAILEAATTIASKGSDFWDMDASHVLPEHSIR-VNDC 206
+SKLL AC +DP+KECC ICQ AI+EAA I+ G D + +++ +NDC
Sbjct: 215 SSKLLDACRTVDPLKECCRPICQPAIMEAALIIS--GHQMTVGDKIPLAGSNNVNAINDC 272
Query: 207 RNIVLRWVASKLDPSHAKKVLRKL 230
+N+V +++ KL A R L
Sbjct: 273 KNVVFSYLSRKLPADKANAAFRIL 296