Miyakogusa Predicted Gene

Lj6g3v1812160.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1812160.1 Non Chatacterized Hit- tr|I3T823|I3T823_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,78.42,0,Ala_racemase_N,Alanine racemase, N-terminal;
UPF0001,Uncharacterised protein family UPF0001; no desc,CUFF.59961.1
         (143 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G11930.1 | Symbols:  | Predicted pyridoxal phosphate-dependen...   197   2e-51
AT1G11930.2 | Symbols:  | Predicted pyridoxal phosphate-dependen...   197   2e-51
AT4G26860.1 | Symbols:  | Predicted pyridoxal phosphate-dependen...   189   7e-49
AT4G26860.2 | Symbols:  | Predicted pyridoxal phosphate-dependen...   189   7e-49

>AT1G11930.1 | Symbols:  | Predicted pyridoxal phosphate-dependent
           enzyme, YBL036C type | chr1:4028783-4030298 FORWARD
           LENGTH=257
          Length = 257

 Score =  197 bits (501), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 97/141 (68%), Positives = 115/141 (81%), Gaps = 2/141 (1%)

Query: 3   SSATTDGGPSPPLKAVLERVQQAAERSGRDVKEIRVVAASKMKPVSALQQVYDAGHRCFG 62
           S+A  DG  +  L++V +RV QAAE++GR   +IRVVA SK KPVS ++QVYDAG R FG
Sbjct: 17  SAAAIDGVAA--LRSVFQRVNQAAEKAGRGSDQIRVVAVSKTKPVSLIRQVYDAGQRSFG 74

Query: 63  ENYVQELIEKVPQLPDDIEWHFIGHLQSNKVKLLVAGVPNLAYVETVDDEKKANLLDRAV 122
           ENYVQE+IEK PQLP+DIEWHFIG+LQSNKVK L++GVPNL  VE+VDDEK AN+LDR V
Sbjct: 75  ENYVQEIIEKAPQLPEDIEWHFIGNLQSNKVKPLLSGVPNLVTVESVDDEKIANMLDRVV 134

Query: 123 EKIGRNPLKVFVEVNTSGETS 143
             IGR PLKVFV+VNTSGE S
Sbjct: 135 GNIGRKPLKVFVQVNTSGEDS 155


>AT1G11930.2 | Symbols:  | Predicted pyridoxal phosphate-dependent
           enzyme, YBL036C type | chr1:4028783-4030298 FORWARD
           LENGTH=255
          Length = 255

 Score =  197 bits (500), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 97/141 (68%), Positives = 115/141 (81%), Gaps = 2/141 (1%)

Query: 3   SSATTDGGPSPPLKAVLERVQQAAERSGRDVKEIRVVAASKMKPVSALQQVYDAGHRCFG 62
           S+A  DG  +  L++V +RV QAAE++GR   +IRVVA SK KPVS ++QVYDAG R FG
Sbjct: 17  SAAAIDGVAA--LRSVFQRVNQAAEKAGRGSDQIRVVAVSKTKPVSLIRQVYDAGQRSFG 74

Query: 63  ENYVQELIEKVPQLPDDIEWHFIGHLQSNKVKLLVAGVPNLAYVETVDDEKKANLLDRAV 122
           ENYVQE+IEK PQLP+DIEWHFIG+LQSNKVK L++GVPNL  VE+VDDEK AN+LDR V
Sbjct: 75  ENYVQEIIEKAPQLPEDIEWHFIGNLQSNKVKPLLSGVPNLVTVESVDDEKIANMLDRVV 134

Query: 123 EKIGRNPLKVFVEVNTSGETS 143
             IGR PLKVFV+VNTSGE S
Sbjct: 135 GNIGRKPLKVFVQVNTSGEDS 155


>AT4G26860.1 | Symbols:  | Predicted pyridoxal phosphate-dependent
           enzyme, YBL036C type | chr4:13503291-13504693 REVERSE
           LENGTH=244
          Length = 244

 Score =  189 bits (479), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 86/129 (66%), Positives = 106/129 (82%)

Query: 15  LKAVLERVQQAAERSGRDVKEIRVVAASKMKPVSALQQVYDAGHRCFGENYVQELIEKVP 74
           L++V+ R ++AAE+ GRD + +RV+  SK KPVS ++Q+YDAGHRCFGENYVQE+I+K P
Sbjct: 14  LRSVILRARKAAEQVGRDPERVRVLPVSKTKPVSLIRQIYDAGHRCFGENYVQEIIDKAP 73

Query: 75  QLPDDIEWHFIGHLQSNKVKLLVAGVPNLAYVETVDDEKKANLLDRAVEKIGRNPLKVFV 134
           QLP+DIEWHF+GHLQSNK K L+ GVPNLA V  VD EK AN LDRAV  +GR+PLKV V
Sbjct: 74  QLPEDIEWHFVGHLQSNKAKTLLTGVPNLAMVHGVDGEKVANHLDRAVSNLGRHPLKVLV 133

Query: 135 EVNTSGETS 143
           +VNTSGE S
Sbjct: 134 QVNTSGEVS 142


>AT4G26860.2 | Symbols:  | Predicted pyridoxal phosphate-dependent
           enzyme, YBL036C type | chr4:13503291-13504693 REVERSE
           LENGTH=254
          Length = 254

 Score =  189 bits (479), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 86/129 (66%), Positives = 106/129 (82%)

Query: 15  LKAVLERVQQAAERSGRDVKEIRVVAASKMKPVSALQQVYDAGHRCFGENYVQELIEKVP 74
           L++V+ R ++AAE+ GRD + +RV+  SK KPVS ++Q+YDAGHRCFGENYVQE+I+K P
Sbjct: 14  LRSVILRARKAAEQVGRDPERVRVLPVSKTKPVSLIRQIYDAGHRCFGENYVQEIIDKAP 73

Query: 75  QLPDDIEWHFIGHLQSNKVKLLVAGVPNLAYVETVDDEKKANLLDRAVEKIGRNPLKVFV 134
           QLP+DIEWHF+GHLQSNK K L+ GVPNLA V  VD EK AN LDRAV  +GR+PLKV V
Sbjct: 74  QLPEDIEWHFVGHLQSNKAKTLLTGVPNLAMVHGVDGEKVANHLDRAVSNLGRHPLKVLV 133

Query: 135 EVNTSGETS 143
           +VNTSGE S
Sbjct: 134 QVNTSGEVS 142