Miyakogusa Predicted Gene

Lj6g3v1790930.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1790930.1 tr|G6FQU5|G6FQU5_9CYAN PAP fibrillin family
protein OS=Fischerella sp. JSC-11 GN=FJSC11DRAFT_1242
PE,34.56,9e-19,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; PAP_fibrillin,Plastid lipid-associated pr,CUFF.59942.1
         (313 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G04020.1 | Symbols: FIB | fibrillin | chr4:1932161-1933546 FO...   355   2e-98
AT4G22240.1 | Symbols:  | Plastid-lipid associated protein PAP /...   349   1e-96
AT2G35490.1 | Symbols:  | Plastid-lipid associated protein PAP /...   224   5e-59
AT2G42130.4 | Symbols:  | Plastid-lipid associated protein PAP /...    50   2e-06
AT2G42130.3 | Symbols:  | Plastid-lipid associated protein PAP /...    49   3e-06
AT3G58010.1 | Symbols: PGL34 | plastoglobulin 34kD | chr3:214759...    49   3e-06
AT2G42130.5 | Symbols:  | Plastid-lipid associated protein PAP /...    48   1e-05

>AT4G04020.1 | Symbols: FIB | fibrillin | chr4:1932161-1933546
           FORWARD LENGTH=318
          Length = 318

 Score =  355 bits (912), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 187/292 (64%), Positives = 213/292 (72%), Gaps = 12/292 (4%)

Query: 26  IFPPSTVGIRSKPVGTPRISAHIPRPVVIARAKTSDDEWGPE------PSSLAAXXXXXX 79
           + P +++  RS+      I   + RP    RA   DDEWG +       SS         
Sbjct: 31  LLPINSINRRSE------IGVSVHRPDFKIRATDIDDEWGQDGVERVFASSSTVSVADKA 84

Query: 80  XXXXXXXXXXXXALVDSFYGTDRGLKATSDTRAVIVELITQLEAKNPTAAPTDALTLLNG 139
                       +L DS YGTDRGL  +SDTRA I ELITQLE+KNPT AP +AL LLNG
Sbjct: 85  IESVEETERLKRSLADSLYGTDRGLSVSSDTRAEISELITQLESKNPTPAPNEALFLLNG 144

Query: 140 KWILAYTSFAGLYPLLSRGTFSLVKVEEISQTIDSENFAVENSVRFAGPLTTTSISTNAK 199
           KWILAYTSF GL+PLLSR    LVKV+EISQTIDS++F V+NSVRFAGP +TTS STNAK
Sbjct: 145 KWILAYTSFVGLFPLLSRRIEPLVKVDEISQTIDSDSFTVQNSVRFAGPFSTTSFSTNAK 204

Query: 200 FEIRSPKRVQIKFEEGIIGTPQLTDSLVIPENVEFLGQNIDLTPFKGILTSVQDTASSVV 259
           FEIRSPKRVQIKFE+G+IGTPQLTDS+ IPE+VE LGQ IDL P KG+LTSVQDTASSV 
Sbjct: 205 FEIRSPKRVQIKFEQGVIGTPQLTDSIEIPESVEVLGQKIDLNPIKGLLTSVQDTASSVA 264

Query: 260 RTISNQPPLKIPISGSNAQSWLLTTYLDEELRISRGDGGSVFVLIKEGSSLL 311
           RTISNQPPLK  +   N QSWLLTTYLD++LRISRGDGGSV+VLIKEGSSLL
Sbjct: 265 RTISNQPPLKFSLPSDNTQSWLLTTYLDKDLRISRGDGGSVYVLIKEGSSLL 316


>AT4G22240.1 | Symbols:  | Plastid-lipid associated protein PAP /
           fibrillin family protein | chr4:11766090-11767227
           REVERSE LENGTH=310
          Length = 310

 Score =  349 bits (895), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 172/220 (78%), Positives = 193/220 (87%)

Query: 92  ALVDSFYGTDRGLKATSDTRAVIVELITQLEAKNPTAAPTDALTLLNGKWILAYTSFAGL 151
           +LVDS YGTDRGL A+S+TRA I +LITQLE+KNPT APT+AL LLNGKWILAYTSF  L
Sbjct: 89  SLVDSLYGTDRGLSASSETRAEIGDLITQLESKNPTPAPTEALFLLNGKWILAYTSFVNL 148

Query: 152 YPLLSRGTFSLVKVEEISQTIDSENFAVENSVRFAGPLTTTSISTNAKFEIRSPKRVQIK 211
           +PLLSRG   L+KV+EISQTIDS+NF V+NSVRFAGPL T SISTNAKFEIRSPKRVQIK
Sbjct: 149 FPLLSRGIVPLIKVDEISQTIDSDNFTVQNSVRFAGPLGTNSISTNAKFEIRSPKRVQIK 208

Query: 212 FEEGIIGTPQLTDSLVIPENVEFLGQNIDLTPFKGILTSVQDTASSVVRTISNQPPLKIP 271
           FE+G+IGTPQLTDS+ IPE VE LGQ IDL P +G+LTSVQDTASSV RTIS+QPPLK  
Sbjct: 209 FEQGVIGTPQLTDSIEIPEYVEVLGQKIDLNPIRGLLTSVQDTASSVARTISSQPPLKFS 268

Query: 272 ISGSNAQSWLLTTYLDEELRISRGDGGSVFVLIKEGSSLL 311
           +   NAQSWLLTTYLD+++RISRGDGGSVFVLIKEGS LL
Sbjct: 269 LPADNAQSWLLTTYLDKDIRISRGDGGSVFVLIKEGSPLL 308


>AT2G35490.1 | Symbols:  | Plastid-lipid associated protein PAP /
           fibrillin family protein | chr2:14912309-14913797
           REVERSE LENGTH=376
          Length = 376

 Score =  224 bits (572), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 115/252 (45%), Positives = 158/252 (62%), Gaps = 1/252 (0%)

Query: 60  SDDEWGPEPSSLAAXXXXXXXXXXXXXXXXXXALVDSFYGTDRGLKATSDTRAVIVELIT 119
           ++DEWG E                         L DS YGT+ G KA S+ RA ++EL+ 
Sbjct: 124 NEDEWGGEIGGETEADAGNGSAVSDPTWELKRCLADSVYGTELGFKAGSEVRAEVLELVN 183

Query: 120 QLEAKNPTAAPTDALTLLNGKWILAYTSFAGLYPLLSRGTFSLVKVEEISQTIDSENFAV 179
           QLEA NPT AP +   LL+G W+L YT+F+ L PLL+ G+  L+KV+ ISQ+ID+ N  +
Sbjct: 184 QLEALNPTPAPLENPELLDGNWVLLYTAFSELIPLLAAGSTPLLKVKSISQSIDTNNLII 243

Query: 180 ENSVRFAGPLTTTSISTNAKFEIRSPKRVQIKFEEGIIGTPQLTDSLVIPENVEFLGQNI 239
           +NS   + P    S S  A FE+RSP R+++ F+EG +  P +  S+ +PE+V   GQ I
Sbjct: 244 DNSTTLSSPFADFSFSATASFEVRSPSRIEVSFKEGTLKPPVIKSSVDLPESVGVFGQQI 303

Query: 240 DLTPFKGILTSVQDTASSVVRTISNQPPLKIPISGSNAQSWLLTTYLDEELRISRGDGGS 299
            L+  K  L  +QD A+++ R +S QPPLK+P  G+   SWLLTTYLD++LRISRGDGG 
Sbjct: 304 SLSLLKQSLNPLQDVAANISRALSGQPPLKLPFPGNRGSSWLLTTYLDKDLRISRGDGG- 362

Query: 300 VFVLIKEGSSLL 311
           +FVL +EGSSLL
Sbjct: 363 LFVLAREGSSLL 374


>AT2G42130.4 | Symbols:  | Plastid-lipid associated protein PAP /
           fibrillin family protein | chr2:17566242-17567916
           FORWARD LENGTH=299
          Length = 299

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 21/207 (10%)

Query: 105 KATSDTRAVIVELITQLEAKNPTAAPTDALTLLNGKWILAYTSFAGLYPLLSRGTF---- 160
           K T+  R  + E IT LE  NPT  PT +     G+W   +        L +R  F    
Sbjct: 92  KTTNMQRIDVNERITSLERLNPTPRPTTS-PCFEGRWNFEWFGSGSPGLLAARVIFERFP 150

Query: 161 -SLVKVEEISQTIDSENFAVENSVRFAGPLTTTSISTNAKFEIRSPKRVQIKFEEGIIGT 219
            +L  +  +   I   N     +++    + +  I  ++K  +  P R++ ++ EG++ T
Sbjct: 151 STLANLSRMEILIKDANAKATANIKLLNSIES-KIILSSKLTVEGPLRLKEEYVEGMLET 209

Query: 220 PQLTDSLVIPENVE-FLGQNIDLTPFKGILTSVQDTASSVVRTISNQPPLKIPISGSNAQ 278
           P + +   +PE ++  LGQ    T  + +   ++DT +S          L+IP+SGS  +
Sbjct: 210 PTVIEE-AVPEQLKSALGQAA--TTLQQLPALIKDTLAS---------GLRIPLSGS-FE 256

Query: 279 SWLLTTYLDEELRISRGDGGSVFVLIK 305
            + + +YLDEE+ I R   G   VL +
Sbjct: 257 RFFMISYLDEEILIVRDTEGVPEVLTR 283


>AT2G42130.3 | Symbols:  | Plastid-lipid associated protein PAP /
           fibrillin family protein | chr2:17566389-17567916
           FORWARD LENGTH=271
          Length = 271

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 21/207 (10%)

Query: 105 KATSDTRAVIVELITQLEAKNPTAAPTDALTLLNGKWILAYTSFAGLYPLLSRGTF---- 160
           K T+  R  + E IT LE  NPT  PT +     G+W   +        L +R  F    
Sbjct: 64  KTTNMQRIDVNERITSLERLNPTPRPTTS-PCFEGRWNFEWFGSGSPGLLAARVIFERFP 122

Query: 161 -SLVKVEEISQTIDSENFAVENSVRFAGPLTTTSISTNAKFEIRSPKRVQIKFEEGIIGT 219
            +L  +  +   I   N     +++    + +  I  ++K  +  P R++ ++ EG++ T
Sbjct: 123 STLANLSRMEILIKDANAKATANIKLLNSIES-KIILSSKLTVEGPLRLKEEYVEGMLET 181

Query: 220 PQLTDSLVIPENVE-FLGQNIDLTPFKGILTSVQDTASSVVRTISNQPPLKIPISGSNAQ 278
           P + +   +PE ++  LGQ    T  + +   ++DT +S          L+IP+SGS  +
Sbjct: 182 PTVIEE-AVPEQLKSALGQAA--TTLQQLPALIKDTLAS---------GLRIPLSGS-FE 228

Query: 279 SWLLTTYLDEELRISRGDGGSVFVLIK 305
            + + +YLDEE+ I R   G   VL +
Sbjct: 229 RFFMISYLDEEILIVRDTEGVPEVLTR 255


>AT3G58010.1 | Symbols: PGL34 | plastoglobulin 34kD |
           chr3:21475949-21477463 REVERSE LENGTH=308
          Length = 308

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 19/206 (9%)

Query: 105 KATSDTRAVIVELITQLEAKNPTAAPTDALTLLNGKWILAYTSFAGLYPLLSRGTF---- 160
           K T   +  + E IT LE  NPT  PT +   L G+W   +        L  R  F    
Sbjct: 97  KITDMQKIDVNERITNLERLNPTPRPTTS-PYLEGRWSFEWFGVNTPGSLAVRVMFERFP 155

Query: 161 -SLVKVEEISQTIDSENFAVENSVRFAGPLTTTSISTNAKFEIRSPKRVQIKFEEGIIGT 219
            +LV +  +   I   N     +++    +    I+ ++K  I  P R++ ++ EG++ +
Sbjct: 156 STLVSLSNMEIFIKDNNTKATANIKLLNSIEN-KITLSSKLTIEGPLRMKEEYLEGLLES 214

Query: 220 PQLTDSLVIPENVEFLGQNIDLTPFKGILTSVQDTASSVVRTISNQPPLKIPISGSNAQS 279
           P + +  V  +    LGQ           T++Q     +  T++N   L+IP+ G+  Q 
Sbjct: 215 PTVIEEAVPDQLRGLLGQAT---------TTLQQLPEPIKDTLANG--LRIPLGGT-YQR 262

Query: 280 WLLTTYLDEELRISRGDGGSVFVLIK 305
           + + +YLD+E+ I R   G   VL +
Sbjct: 263 FFMISYLDDEILIVRDTAGVPEVLTR 288


>AT2G42130.5 | Symbols:  | Plastid-lipid associated protein PAP /
           fibrillin family protein | chr2:17566862-17567916
           FORWARD LENGTH=204
          Length = 204

 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 21/201 (10%)

Query: 111 RAVIVELITQLEAKNPTAAPTDALTLLNGKWILAYTSFAGLYPLLSRGTF-----SLVKV 165
           R  + E IT LE  NPT  PT +     G+W   +        L +R  F     +L  +
Sbjct: 3   RIDVNERITSLERLNPTPRPTTS-PCFEGRWNFEWFGSGSPGLLAARVIFERFPSTLANL 61

Query: 166 EEISQTIDSENFAVENSVRFAGPLTTTSISTNAKFEIRSPKRVQIKFEEGIIGTPQLTDS 225
             +   I   N     +++    + +  I  ++K  +  P R++ ++ EG++ TP + + 
Sbjct: 62  SRMEILIKDANAKATANIKLLNSIES-KIILSSKLTVEGPLRLKEEYVEGMLETPTVIEE 120

Query: 226 LVIPENVE-FLGQNIDLTPFKGILTSVQDTASSVVRTISNQPPLKIPISGSNAQSWLLTT 284
             +PE ++  LGQ    T  + +   ++DT +S          L+IP+SGS  + + + +
Sbjct: 121 -AVPEQLKSALGQAA--TTLQQLPALIKDTLAS---------GLRIPLSGS-FERFFMIS 167

Query: 285 YLDEELRISRGDGGSVFVLIK 305
           YLDEE+ I R   G   VL +
Sbjct: 168 YLDEEILIVRDTEGVPEVLTR 188