Miyakogusa Predicted Gene
- Lj6g3v1787840.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1787840.1 Non Chatacterized Hit- tr|F4JGB3|F4JGB3_ARATH
Uncharacterized protein OS=Arabidopsis thaliana
GN=At4,43.79,5e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; DUF3537,Protein of unknown function DUF35,gene.g66725.t1.1
(415 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G20300.1 | Symbols: | Protein of unknown function (DUF3537) ... 167 2e-41
AT1G50630.1 | Symbols: | Protein of unknown function (DUF3537) ... 164 1e-40
AT1G50630.2 | Symbols: | Protein of unknown function (DUF3537) ... 162 3e-40
AT4G22270.1 | Symbols: MRB1, ATMRB1 | Protein of unknown functio... 149 4e-36
AT4G03820.1 | Symbols: | Protein of unknown function (DUF3537) ... 140 1e-33
AT4G03820.2 | Symbols: | Protein of unknown function (DUF3537) ... 140 2e-33
AT2G21080.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 71 1e-12
AT1G67570.1 | Symbols: | Protein of unknown function (DUF3537) ... 70 2e-12
>AT3G20300.1 | Symbols: | Protein of unknown function (DUF3537) |
chr3:7079832-7081809 REVERSE LENGTH=452
Length = 452
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/179 (46%), Positives = 111/179 (62%), Gaps = 5/179 (2%)
Query: 41 SHLEQRNRKFRSYLRWVFVDQSNVYKAVLSWSVFITLTFIVPIMLHFLFHCPKTCDADHR 100
SH + FR YLRW+ VDQS+ + AVLSWS+F+ T +VP HF+ C CD+ H
Sbjct: 37 SHAQDELHSFRKYLRWMCVDQSSPWTAVLSWSMFVVFTLVVPATSHFMLACSD-CDSHHS 95
Query: 101 RPYYIPAQVALSVLSTLSFFCLARWDRKYGLSEFLFVDKLNDGS----LKIEQQMQATKK 156
RPY Q++LS + LSF CL+R+ KYGL FLF DKL D S L Q+ + K
Sbjct: 96 RPYDSVVQLSLSSFAALSFLCLSRFVSKYGLRRFLFFDKLWDESETVRLGYTNQLNRSLK 155
Query: 157 HILSWGLPCFLASCAYKIWWYVSGSHQIPYYGERYTSNIILCTLDLWSWLYRTSIFFLI 215
+ + PCFLA +YKIWWY SG+ QIP+ G S+ + C ++L SWLYRT++ FL+
Sbjct: 156 ILSYFVSPCFLAMSSYKIWWYASGASQIPFLGNVILSDTVACLMELCSWLYRTTVIFLV 214
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/148 (47%), Positives = 93/148 (62%), Gaps = 3/148 (2%)
Query: 215 IVSITLLSGLFILLRTATKITHQAQSITALAAKWHIYATINLLDNIDGETSTTHVSTSKR 274
+ S+TL++ L ILLR+A+KITH+AQ++T LAAKWH+ ATI + +DGET S
Sbjct: 302 LCSMTLVTALLILLRSASKITHKAQAVTCLAAKWHVCATIESFETVDGETPRLVDRASGH 361
Query: 275 TRVP---NTSLGLTXXXXXXXXXXLNNTKLLSLDTHDISFQKRQALVIYMENNRAGISVF 331
P + + NN + + ISFQKRQALV Y ENNR+GI+VF
Sbjct: 362 GYYPTDDDNGESDSEDYGDEEDDFDNNNLIPAYAYSTISFQKRQALVNYFENNRSGITVF 421
Query: 332 GFMLDRTCLYSIFPVEMALCLWLLNKTI 359
GF LDR+ L++IF +EM+L LWLL KTI
Sbjct: 422 GFTLDRSTLHTIFGIEMSLVLWLLGKTI 449
>AT1G50630.1 | Symbols: | Protein of unknown function (DUF3537) |
chr1:18751654-18753569 REVERSE LENGTH=453
Length = 453
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 112/179 (62%), Gaps = 5/179 (2%)
Query: 41 SHLEQRNRKFRSYLRWVFVDQSNVYKAVLSWSVFITLTFIVPIMLHFLFHCPKTCDADHR 100
SH + FR YLRW+ VD S+ + A+LSW++FI T +VP + HFL C CD+ H
Sbjct: 31 SHQQDELHSFRKYLRWMCVDHSSPWTAILSWTMFIVFTLVVPAISHFLLACAD-CDSYHS 89
Query: 101 RPYYIPAQVALSVLSTLSFFCLARWDRKYGLSEFLFVDKLNDGSLKIEQQMQA---TKKH 157
RPY Q++LS ++T+SF CL R+ KYGL FLF DKL D S + + T H
Sbjct: 90 RPYDSVVQLSLSSVATVSFLCLTRFVSKYGLRRFLFFDKLWDESETVRRNYTNQLNTSLH 149
Query: 158 ILSW-GLPCFLASCAYKIWWYVSGSHQIPYYGERYTSNIILCTLDLWSWLYRTSIFFLI 215
I+S+ +PCF A AYKIWWY SG +IP+ G S+ + C ++L SWLYRT++ FL+
Sbjct: 150 IVSYFVIPCFSAMSAYKIWWYASGGSRIPFLGNAVLSDTVACIMELCSWLYRTTVIFLV 208
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 89/155 (57%), Gaps = 10/155 (6%)
Query: 215 IVSITLLSGLFILLRTATKITHQAQSITALAAKWHIYATINLLDNI------DGETSTTH 268
+ S+TL++ L ILLR+A+KITH+AQ++T LAAKWH+ AT+ D ET T
Sbjct: 296 LCSMTLVTALLILLRSASKITHKAQAVTCLAAKWHVCATLESFDQTVESFDQTVETPTLV 355
Query: 269 VSTSKRTRVPNTSLGLTXXXXXXXXXXLNNTKLLSL----DTHDISFQKRQALVIYMENN 324
+ + + LT ++ + +SFQKRQALV Y ENN
Sbjct: 356 ARNNNDNNNVHDVVTLTESDSDEYGDEEDDLDNNDIIPVYAFSTMSFQKRQALVSYFENN 415
Query: 325 RAGISVFGFMLDRTCLYSIFPVEMALCLWLLNKTI 359
AGI+V+GF LDR L++IF +E++L LWLL KTI
Sbjct: 416 SAGITVYGFTLDRGTLHTIFGLELSLVLWLLGKTI 450
>AT1G50630.2 | Symbols: | Protein of unknown function (DUF3537) |
chr1:18751813-18753569 REVERSE LENGTH=428
Length = 428
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 112/179 (62%), Gaps = 5/179 (2%)
Query: 41 SHLEQRNRKFRSYLRWVFVDQSNVYKAVLSWSVFITLTFIVPIMLHFLFHCPKTCDADHR 100
SH + FR YLRW+ VD S+ + A+LSW++FI T +VP + HFL C CD+ H
Sbjct: 31 SHQQDELHSFRKYLRWMCVDHSSPWTAILSWTMFIVFTLVVPAISHFLLACAD-CDSYHS 89
Query: 101 RPYYIPAQVALSVLSTLSFFCLARWDRKYGLSEFLFVDKLNDGSLKIEQQMQA---TKKH 157
RPY Q++LS ++T+SF CL R+ KYGL FLF DKL D S + + T H
Sbjct: 90 RPYDSVVQLSLSSVATVSFLCLTRFVSKYGLRRFLFFDKLWDESETVRRNYTNQLNTSLH 149
Query: 158 ILSW-GLPCFLASCAYKIWWYVSGSHQIPYYGERYTSNIILCTLDLWSWLYRTSIFFLI 215
I+S+ +PCF A AYKIWWY SG +IP+ G S+ + C ++L SWLYRT++ FL+
Sbjct: 150 IVSYFVIPCFSAMSAYKIWWYASGGSRIPFLGNAVLSDTVACIMELCSWLYRTTVIFLV 208
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 36/45 (80%)
Query: 215 IVSITLLSGLFILLRTATKITHQAQSITALAAKWHIYATINLLDN 259
+ S+TL++ L ILLR+A+KITH+AQ++T LAAKWH+ AT+ D
Sbjct: 296 LCSMTLVTALLILLRSASKITHKAQAVTCLAAKWHVCATLESFDQ 340
>AT4G22270.1 | Symbols: MRB1, ATMRB1 | Protein of unknown function
(DUF3537) | chr4:11773396-11775782 FORWARD LENGTH=437
Length = 437
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 106/170 (62%), Gaps = 7/170 (4%)
Query: 50 FRSYLRWVFVDQSNVYKAVLSWSVFITLTFIVPIMLHFLFHCPKTCDADHRRPYYIPAQV 109
F S + W DQSN A+LSWSVF L IVP++ HFL C CD HRRPY + Q+
Sbjct: 35 FMSLVLWF--DQSNFGTALLSWSVFFLLVVIVPLISHFLLVCSD-CDFHHRRPYDVIVQL 91
Query: 110 ALSVLSTLSFFCLARWDRKYGLSEFLFVDKLNDGSLKI----EQQMQATKKHILSWGLPC 165
+LS+ + +SF L+ W RK+G+ FLF+DKL D S K+ E ++Q + K ++ + LP
Sbjct: 92 SLSIFAGISFVSLSIWSRKFGMRRFLFLDKLWDVSDKVRIEYEAEIQRSLKRLMIFVLPS 151
Query: 166 FLASCAYKIWWYVSGSHQIPYYGERYTSNIILCTLDLWSWLYRTSIFFLI 215
Y+IWWY+SG +QIPY S+++ CTL L SWLYR S+F ++
Sbjct: 152 LTLEATYRIWWYISGFNQIPYIINPILSHVVACTLQLSSWLYRNSLFIIV 201
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 108/145 (74%), Gaps = 1/145 (0%)
Query: 215 IVSITLLSGLFILLRTATKITHQAQSITALAAKWHIYATINLLDNIDGETSTTHVSTSKR 274
+ S++L++G+FI LR+ATKITH+AQS+T+LAAKW++ AT++ D++DGET T + S+
Sbjct: 290 LCSLSLVTGVFICLRSATKITHKAQSVTSLAAKWNVCATVDSFDHLDGETPTGSIIESQV 349
Query: 275 TRVPNTSLGLTXXXXXXXXXXLNNTKLLSLDTHDISFQKRQALVIYMENNRAGISVFGFM 334
+ N ++ + L+NTK+ + + IS+QKRQALV Y+ENN+AGI+V+GF+
Sbjct: 350 SLRGN-AIETSDDEEGEGDDDLDNTKIHPIYANTISYQKRQALVTYLENNKAGITVYGFL 408
Query: 335 LDRTCLYSIFPVEMALCLWLLNKTI 359
+DR+ L +IF +E+AL LWLLNKTI
Sbjct: 409 VDRSWLNTIFGIELALLLWLLNKTI 433
>AT4G03820.1 | Symbols: | Protein of unknown function (DUF3537) |
chr4:1772114-1774380 REVERSE LENGTH=437
Length = 437
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 101/163 (61%), Gaps = 5/163 (3%)
Query: 56 WVFVDQSNVYKAVLSWSVFITLTFIVPIMLHFLFHCPKTCDADHRRPYYIPAQVALSVLS 115
+++ DQSN K +LSWS+F L IVP++ HF+ C CD HRRPY Q++LS+ +
Sbjct: 36 FLWFDQSNRIKTLLSWSIFFLLAVIVPMISHFVLICAD-CDFKHRRPYDGLVQLSLSIFA 94
Query: 116 TLSFFCLARWDRKYGLSEFLFVDKLNDGSLKI----EQQMQATKKHILSWGLPCFLASCA 171
+SF L+ W +KYG+ FLF DKL D S K+ E ++Q + K + + LP
Sbjct: 95 GISFVSLSDWSKKYGIRRFLFFDKLKDVSDKVRIGYEAKIQRSMKLLAIFVLPSTTLQAI 154
Query: 172 YKIWWYVSGSHQIPYYGERYTSNIILCTLDLWSWLYRTSIFFL 214
Y+IWWY SG +QIPY S+++ CTL L SWLYRTS+F +
Sbjct: 155 YRIWWYASGFNQIPYIINPTLSHVLACTLQLSSWLYRTSLFII 197
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%), Gaps = 12/152 (7%)
Query: 215 IVSITLLSGLFILLRTATKITHQAQSITALAAKWHIYATINLLDNI-DGETSTTHVST-- 271
+ S +L+SGLFI L++AT++TH+AQS+T++A KW++ A+++ D + DGET +T
Sbjct: 287 LCSTSLVSGLFICLKSATQMTHKAQSVTSIATKWNVCASLDTFDVLYDGETPKCPTTTQH 346
Query: 272 ----SKRTRVPNTSLGLTXXXXXXXXXXLNNTKLLSLDTHDISFQKRQALVIYMENNRAG 327
S+R V +S ++ + IS QKRQALV Y+ENNRAG
Sbjct: 347 SQILSRRRNVVQSSDDDEEGEGDDNDLEIH-----PIFARAISSQKRQALVTYLENNRAG 401
Query: 328 ISVFGFMLDRTCLYSIFPVEMALCLWLLNKTI 359
I+V+GF++D+T L IF +E+AL LWLL KTI
Sbjct: 402 ITVYGFLVDKTWLRMIFSIELALLLWLLKKTI 433
>AT4G03820.2 | Symbols: | Protein of unknown function (DUF3537) |
chr4:1772163-1774380 REVERSE LENGTH=453
Length = 453
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 101/163 (61%), Gaps = 5/163 (3%)
Query: 56 WVFVDQSNVYKAVLSWSVFITLTFIVPIMLHFLFHCPKTCDADHRRPYYIPAQVALSVLS 115
+++ DQSN K +LSWS+F L IVP++ HF+ C CD HRRPY Q++LS+ +
Sbjct: 36 FLWFDQSNRIKTLLSWSIFFLLAVIVPMISHFVLICAD-CDFKHRRPYDGLVQLSLSIFA 94
Query: 116 TLSFFCLARWDRKYGLSEFLFVDKLNDGSLKI----EQQMQATKKHILSWGLPCFLASCA 171
+SF L+ W +KYG+ FLF DKL D S K+ E ++Q + K + + LP
Sbjct: 95 GISFVSLSDWSKKYGIRRFLFFDKLKDVSDKVRIGYEAKIQRSMKLLAIFVLPSTTLQAI 154
Query: 172 YKIWWYVSGSHQIPYYGERYTSNIILCTLDLWSWLYRTSIFFL 214
Y+IWWY SG +QIPY S+++ CTL L SWLYRTS+F +
Sbjct: 155 YRIWWYASGFNQIPYIINPTLSHVLACTLQLSSWLYRTSLFII 197
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%), Gaps = 12/152 (7%)
Query: 215 IVSITLLSGLFILLRTATKITHQAQSITALAAKWHIYATINLLDNI-DGETSTTHVST-- 271
+ S +L+SGLFI L++AT++TH+AQS+T++A KW++ A+++ D + DGET +T
Sbjct: 287 LCSTSLVSGLFICLKSATQMTHKAQSVTSIATKWNVCASLDTFDVLYDGETPKCPTTTQH 346
Query: 272 ----SKRTRVPNTSLGLTXXXXXXXXXXLNNTKLLSLDTHDISFQKRQALVIYMENNRAG 327
S+R V +S ++ + IS QKRQALV Y+ENNRAG
Sbjct: 347 SQILSRRRNVVQSSDDDEEGEGDDNDLEIH-----PIFARAISSQKRQALVTYLENNRAG 401
Query: 328 ISVFGFMLDRTCLYSIFPVEMALCLWLLNKTI 359
I+V+GF++D+T L IF +E+AL LWLL KTI
Sbjct: 402 ITVYGFLVDKTWLRMIFSIELALLLWLLKKTI 433
>AT2G21080.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: vacuole;
EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9
growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF3537 (InterPro:IPR021924); BEST
Arabidopsis thaliana protein match is: Protein of
unknown function (DUF3537) (TAIR:AT3G20300.1); Has 141
Blast hits to 141 proteins in 16 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 140;
Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
| chr2:9043707-9045113 FORWARD LENGTH=414
Length = 414
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 26/146 (17%)
Query: 214 LIVSITLLSGLFILLRTATKITHQAQSITALAAKWHIYATINLLDNIDGETSTTHVSTSK 273
++ S LSG F+ L A +ITH+AQ + +A +WH+ T ++ VS
Sbjct: 292 VVCSAVQLSGFFLCLLGAARITHRAQGVVCIATRWHMALT----------CASEAVSPES 341
Query: 274 RTRVPNTSLGLTXXXXXXXXXXLNNTKLLSLDTHDISFQKRQALVIYMENNRAGISVFGF 333
T + +N + L L + FQ RQALV Y+ +N GI+++G+
Sbjct: 342 DTDSSDN-------------IYINVSPSLDLSSF---FQARQALVEYLRHNNKGITLYGY 385
Query: 334 MLDRTCLYSIFPVEMALCLWLLNKTI 359
LDR L+++F E +L +W+L+K +
Sbjct: 386 ALDRGLLHTLFAFEFSLVMWILSKVV 411
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 9/174 (5%)
Query: 48 RKFRSYLRWVFVDQSNVYKAVLSWSVFITLTFIVPIMLHFLFHCPK-----TCDADHRRP 102
R FR L+W +D S+ +S+ +F+ T +VP++ P+ DA+
Sbjct: 33 RNFRLLLKWCALDHSSSCGKAVSYMMFVVFTLLVPLISCLFIKTPRNRPSAVMDAN---S 89
Query: 103 YYIPAQVALSVLSTLSFFCLARWDRKYGLSEFLFVDKLNDGSLKIEQQMQATKKHILSWG 162
+ + Q S L+ + F L + R Y L++ LF+D L +++ +++
Sbjct: 90 FNVLVQFPESGLAVIGFLTLICFFRIYSLTKLLFLDDSTLVRLGYSRELDKALRYLAYIL 149
Query: 163 LPCFLASCAYKIWWYVSGSHQIPYYGERYTS-NIILCTLDLWSWLYRTSIFFLI 215
+P FL +K ++ S P+ + N ++ L L+SW+YRT +F L+
Sbjct: 150 VPSFLVELVHKSIFFYSAEVSFPFIKSSCAALNFVMFFLVLFSWVYRTGVFLLV 203
>AT1G67570.1 | Symbols: | Protein of unknown function (DUF3537) |
chr1:25325318-25326938 FORWARD LENGTH=456
Length = 456
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 3/150 (2%)
Query: 213 FLIVSITLLSGLFILLRTATKITHQAQSITALAAKWHIYATINLLDNIDGETSTTHVSTS 272
F + ++ + G+ + L ATKI+H+AQ+I ++A++WH + + D+ S + V
Sbjct: 302 FAVSAVVQVVGIILCLHAATKISHRAQAIASVASRWHAMMSCSSTDSTQIRASPSGVHLE 361
Query: 273 KRTRVPNT---SLGLTXXXXXXXXXXLNNTKLLSLDTHDISFQKRQALVIYMENNRAGIS 329
T P + S + + T S+ KRQA V+Y++ N GI+
Sbjct: 362 ATTNPPISFPISRSDSDVESMDHYMRMPVTNQFPSYMSMSSYHKRQAFVLYLQMNPGGIT 421
Query: 330 VFGFMLDRTCLYSIFPVEMALCLWLLNKTI 359
+FG+ +DR + +IF +E++L ++L KT+
Sbjct: 422 IFGWTVDRHLINTIFFIELSLVTFVLGKTV 451
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 85/168 (50%), Gaps = 11/168 (6%)
Query: 50 FRSYLRWVFVDQSNVYKAVLSWSVFITLTFIVPIMLHFLFHCPKTCDADHRRPYYIPAQV 109
++L + +QS+ VLSW VF+++ ++P+ + L HC C+ + + + V
Sbjct: 54 LETFLTLLGFNQSSKQSLVLSWIVFLSIGLVLPVTVLELGHC-LGCERYQYKSFELNIVV 112
Query: 110 ALSVLSTLSFFCLARWDRKYGLSEFLFVDKLNDGSLKIE----QQMQATKKHILSWGLPC 165
+ ++L+ +S C++ RK+G+ +FLFVD+L+ +++ QQ+ + + + W LPC
Sbjct: 113 SQALLAGVSLLCVSHNLRKHGIRKFLFVDQLSGRMDRLKAQYIQQILNSVRLLAVWSLPC 172
Query: 166 FLASCAYKIWWYVSGSHQIPYYGERYTSNIILCTLDLWSWLYRTSIFF 213
F +I H P+ ++IL SW Y ++IF
Sbjct: 173 FALKGVREIIRMYYVPHDQPWLSVAILLSMIL------SWTYLSTIFL 214