Miyakogusa Predicted Gene
- Lj6g3v1786750.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1786750.1 tr|B9N8I4|B9N8I4_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_584752 PE=4
SV=1,46.39,8e-19,DUF506,Protein of unknown function DUF506,
plant,CUFF.59926.1
(100 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G12030.1 | Symbols: | Protein of unknown function (DUF506) ... 90 3e-19
AT1G62420.1 | Symbols: | Protein of unknown function (DUF506) ... 63 4e-11
AT3G07350.1 | Symbols: | Protein of unknown function (DUF506) ... 57 3e-09
AT3G25240.1 | Symbols: | Protein of unknown function (DUF506) ... 53 5e-08
AT4G14620.1 | Symbols: | Protein of unknown function (DUF506) ... 50 3e-07
AT2G38820.1 | Symbols: | Protein of unknown function (DUF506) ... 50 4e-07
AT2G38820.2 | Symbols: | Protein of unknown function (DUF506) ... 50 4e-07
AT4G32480.1 | Symbols: | Protein of unknown function (DUF506) ... 49 6e-07
AT3G22970.1 | Symbols: | Protein of unknown function (DUF506) ... 46 5e-06
>AT1G12030.1 | Symbols: | Protein of unknown function (DUF506) |
chr1:4064751-4066319 REVERSE LENGTH=295
Length = 295
Score = 89.7 bits (221), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Query: 1 MCSAIKGSMKKSDLHLPPWRRNAYMQAKWFSSYKRTSNAVASRKATSTVSPDSLFPKRSI 60
MC I+ SMK++D+ +PPWRRN YMQAKWF YKRTSN V SR + P +
Sbjct: 200 MCFEIRRSMKRADIFVPPWRRNGYMQAKWFGHYKRTSNEVVSRVKSCGCGP-------RV 252
Query: 61 GF-EARPVKAYNC-REHYVSKTGFRIGHLTAAFNSDSFGMQL 100
GF E+ + +N ++ + ++G ++G LT AFN G+Q+
Sbjct: 253 GFEESVKMTTFNGFKDGEMRRSGLKVGQLTVAFNGSEVGLQI 294
>AT1G62420.1 | Symbols: | Protein of unknown function (DUF506) |
chr1:23102937-23104604 REVERSE LENGTH=283
Length = 283
Score = 62.8 bits (151), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 18/94 (19%)
Query: 1 MCSAIKGSMKKSDLHLPPWRRNAYMQAKWFSSYKRTSNAVASRKATSTVSPDSLFPKRSI 60
MC ++ SMK +H+PPWRRN YMQAKWF YKRTS +T + + + +
Sbjct: 200 MCHEMRRSMKHVGIHVPPWRRNGYMQAKWFGFYKRTS---------TTNNYEMVNTYDTT 250
Query: 61 GFEARPVKAYNCREHYVSKTGFR--IGHLTAAFN 92
F+ C+E + G + +G L+ AFN
Sbjct: 251 AFKG-------CKEEFWEAKGLKVMVGQLSIAFN 277
>AT3G07350.1 | Symbols: | Protein of unknown function (DUF506) |
chr3:2347674-2348570 FORWARD LENGTH=298
Length = 298
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 1 MCSAIKGSMKKSDLHLPPWRRNAYMQAKWFSSYKRTSNAVASRKATSTVSPDSLFPKRSI 60
+C A + S++ L LPPWR+N YMQ +W YKRT+N S TV R+I
Sbjct: 230 VCDAARISLRNRGLTLPPWRKNRYMQTRWLGPYKRTTNLTPSTSGVDTVMC------RAI 283
Query: 61 GFE 63
GF+
Sbjct: 284 GFD 286
>AT3G25240.1 | Symbols: | Protein of unknown function (DUF506) |
chr3:9192540-9193385 FORWARD LENGTH=281
Length = 281
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 2 CSAIKGSMKKSDLHLPPWRRNAYMQAKWFSSYKRTSNAVASRKATSTVSPDSLFPKRSIG 61
C A K SMK L LPPWRR++Y+Q KWF YKR V S ++ D++ RS+G
Sbjct: 212 CDAAKRSMKSRGLSLPPWRRSSYLQHKWFGPYKRK---VGSSLGVKPLNSDAV-SCRSLG 267
Query: 62 FE 63
F+
Sbjct: 268 FD 269
>AT4G14620.1 | Symbols: | Protein of unknown function (DUF506) |
chr4:8389246-8390448 REVERSE LENGTH=341
Length = 341
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 4 AIKGSMKKSDLHLPPWRRNAYMQAKWFSSYKRTS 37
A K S+KK +H PPWR+ YM+AKW SSY R S
Sbjct: 235 ASKQSLKKKGMHFPPWRKADYMRAKWLSSYTRNS 268
>AT2G38820.1 | Symbols: | Protein of unknown function (DUF506) |
chr2:16222271-16223393 FORWARD LENGTH=288
Length = 288
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 1 MCSAIKGSMKKSDLHLPPWRRNAYMQAKWFSSYKRT---SNAVASRKATSTVS 50
+C A K S+KK LH+PPWRR Y+++KW SS+ R SN +++ ++
Sbjct: 226 ICKAAKQSLKKKGLHVPPWRRAEYVKSKWLSSHVRVDQNSNGEVKQESVEVIA 278
>AT2G38820.2 | Symbols: | Protein of unknown function (DUF506) |
chr2:16222271-16223393 FORWARD LENGTH=310
Length = 310
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 1 MCSAIKGSMKKSDLHLPPWRRNAYMQAKWFSSYKR 35
+C A K S+KK LH+PPWRR Y+++KW SS+ R
Sbjct: 248 ICKAAKQSLKKKGLHVPPWRRAEYVKSKWLSSHVR 282
>AT4G32480.1 | Symbols: | Protein of unknown function (DUF506) |
chr4:15676488-15677776 FORWARD LENGTH=287
Length = 287
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 6/56 (10%)
Query: 1 MCSAIKGSMKKSDLHLPPWRRNAYMQAKWFSSYKRTSNAVASRKATSTVSPDSLFP 56
+C+A K MK +H+ PWR++ YMQAKWF + +R S + S + +++FP
Sbjct: 211 LCTAAKKCMKDKKMHMGPWRKHKYMQAKWFGTCERKSVSPVSE------TEENMFP 260
>AT3G22970.1 | Symbols: | Protein of unknown function (DUF506) |
chr3:8152592-8153881 FORWARD LENGTH=370
Length = 370
Score = 45.8 bits (107), Expect = 5e-06, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 1 MCSAIKGSMKKSDLHLPPWRRNAYMQAKWFSSYKRTS 37
+ A K S+KK + PPWR+ YM++KW SSY R S
Sbjct: 257 ISEAAKQSLKKKGMPFPPWRKAEYMRSKWLSSYTRAS 293