Miyakogusa Predicted Gene
- Lj6g3v1776670.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1776670.1 tr|G7ILR3|G7ILR3_MEDTR EH-domain-containing
protein OS=Medicago truncatula GN=MTR_2g025180 PE=4
SV=1,84.63,0,seg,NULL; Eps15 homology domain,EPS15 homology (EH);
EF-hand, calcium binding motif,Calcium-binding ,CUFF.59962.1
(542 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G05520.1 | Symbols: ATEHD2, EHD2 | EPS15 homology domain 2 | ... 847 0.0
AT4G05520.2 | Symbols: ATEHD2, EHD2 | EPS15 homology domain 2 | ... 846 0.0
AT3G20290.2 | Symbols: ATEHD1, EHD1 | EPS15 homology domain 1 | ... 829 0.0
AT3G20290.1 | Symbols: ATEHD1, EHD1 | EPS15 homology domain 1 | ... 829 0.0
AT1G21630.1 | Symbols: | Calcium-binding EF hand family protein... 79 8e-15
AT1G21630.2 | Symbols: | Calcium-binding EF hand family protein... 79 9e-15
AT1G20760.1 | Symbols: | Calcium-binding EF hand family protein... 75 2e-13
>AT4G05520.1 | Symbols: ATEHD2, EHD2 | EPS15 homology domain 2 |
chr4:2804522-2807833 FORWARD LENGTH=546
Length = 546
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/533 (74%), Positives = 465/533 (87%), Gaps = 4/533 (0%)
Query: 13 KSESKTYEEWFKLADSDGDGRISGNDATNFFALSNLSRSQLKQLWALADTKRQGFLSFPE 72
K K Y+EWF +ADSDGDGR+SGNDAT FFA+S LSR +LKQ+WA+AD+KRQGFL E
Sbjct: 14 KEHQKIYKEWFNIADSDGDGRVSGNDATKFFAMSKLSRQELKQVWAVADSKRQGFLGLSE 73
Query: 73 FVTAMQLVSLAQAEYELNSDILKTEIDKENIKPPVMEGLD-AFAKKKSLTINTLPEVNEI 131
F+TAM+LVSLAQ +E+ SD+LK ID ++++ PV+EGL+ +K+K N E N +
Sbjct: 74 FITAMKLVSLAQEGHEITSDLLKGSIDMKSVELPVLEGLENVVSKQKVSKTNVDVEDNVV 133
Query: 132 AKPQPFLANPWFAXXXXXXLPPSAVTSIVDGLKRLYNERLKPLEIAYQYNDFASPLLTSS 191
KPQ PWF P V +IVDGLKRLY E+LKPLE+ Y++NDFASP+LTSS
Sbjct: 134 TKPQVTAKTPWFKSKSIIK-PQVNVVTIVDGLKRLYTEKLKPLEVTYRFNDFASPVLTSS 192
Query: 192 DFDAKPMVMLLGQYSTGKTTFIKHLLKCDYPGAHVGPEPTTDRFVVVMSGPDERSVPGNT 251
DFDAKPMVMLLGQYSTGKTTFIKHLL CDYPGAH+GPEPTTDRFVV MSGPDER++PGNT
Sbjct: 193 DFDAKPMVMLLGQYSTGKTTFIKHLLGCDYPGAHIGPEPTTDRFVVAMSGPDERTIPGNT 252
Query: 252 IAVDADMPFSGLTTFGGSFLSKFQCSQMPHPLLDEVTIVDTPGVLSGEKQRTQRSYDFTG 311
+AV ADMPF+GLT+FGG+FLSKF+CSQMPHP+LD++T+VDTPGVLSGEKQR QRSYDFTG
Sbjct: 253 MAVQADMPFNGLTSFGGAFLSKFECSQMPHPVLDQITLVDTPGVLSGEKQRMQRSYDFTG 312
Query: 312 VVSWFAAKCDLILLLFDPHKLDISDEFKRVIASLHGNDDKIRVVLNKADQVNTQQLMRVY 371
V+SWFA+KCD+ILLLFDPHKLDISDEFKRVI SL GN+DKIRVVLNKADQV+TQQLMRVY
Sbjct: 313 VISWFASKCDMILLLFDPHKLDISDEFKRVITSLRGNEDKIRVVLNKADQVDTQQLMRVY 372
Query: 372 GALMWSLGKVLNTPEVSRVYIGSFNDKPMD--GGCSLGRDLFEKEQNDLLADLVDIPKKA 429
GALMWSLGKVLNTPEV RVYIGSFNDKP++ +G++LFEKEQNDLLADL+D+PKKA
Sbjct: 373 GALMWSLGKVLNTPEVVRVYIGSFNDKPINEVAVGPIGKELFEKEQNDLLADLMDVPKKA 432
Query: 430 VDRRINEFVKRARSAKIHAYIISHLKKEMPAIMGKAKAQQKLIDNLDVEFAKVQREYHLP 489
DR+INEFVKRARSAKI+AYI+SHLKKEMPA+MGK+KAQQ+L+DNL+ EF KVQRE+HLP
Sbjct: 433 CDRKINEFVKRARSAKINAYIMSHLKKEMPAMMGKSKAQQRLMDNLEEEFGKVQREFHLP 492
Query: 490 AGDFPNVEHFKEVLSRYSIDKFEKLKPKMIQAVDDMLGYEIPELLRKFRNPYE 542
AGDFP+VEHF+EVL Y+IDKFEKLKPKMIQAVDDMLGY+IP+LL+KFRNPY+
Sbjct: 493 AGDFPSVEHFREVLGGYNIDKFEKLKPKMIQAVDDMLGYDIPDLLKKFRNPYD 545
>AT4G05520.2 | Symbols: ATEHD2, EHD2 | EPS15 homology domain 2 |
chr4:2804522-2807833 FORWARD LENGTH=545
Length = 545
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/532 (73%), Positives = 464/532 (87%), Gaps = 3/532 (0%)
Query: 13 KSESKTYEEWFKLADSDGDGRISGNDATNFFALSNLSRSQLKQLWALADTKRQGFLSFPE 72
K K Y+EWF +ADSDGDGR+SGNDAT FFA+S LSR +LKQ+WA+AD+KRQGFL E
Sbjct: 14 KEHQKIYKEWFNIADSDGDGRVSGNDATKFFAMSKLSRQELKQVWAVADSKRQGFLGLSE 73
Query: 73 FVTAMQLVSLAQAEYELNSDILKTEIDKENIKPPVMEGLDAFAKKKSLTINTLPEVNEIA 132
F+TAM+LVSLAQ +E+ SD+LK ID ++++ PV+EGL+ K+ ++ + + +
Sbjct: 74 FITAMKLVSLAQEGHEITSDLLKGSIDMKSVELPVLEGLENVVSKQKVSKTNVDVEDNVT 133
Query: 133 KPQPFLANPWFAXXXXXXLPPSAVTSIVDGLKRLYNERLKPLEIAYQYNDFASPLLTSSD 192
KPQ PWF P V +IVDGLKRLY E+LKPLE+ Y++NDFASP+LTSSD
Sbjct: 134 KPQVTAKTPWFKSKSIIK-PQVNVVTIVDGLKRLYTEKLKPLEVTYRFNDFASPVLTSSD 192
Query: 193 FDAKPMVMLLGQYSTGKTTFIKHLLKCDYPGAHVGPEPTTDRFVVVMSGPDERSVPGNTI 252
FDAKPMVMLLGQYSTGKTTFIKHLL CDYPGAH+GPEPTTDRFVV MSGPDER++PGNT+
Sbjct: 193 FDAKPMVMLLGQYSTGKTTFIKHLLGCDYPGAHIGPEPTTDRFVVAMSGPDERTIPGNTM 252
Query: 253 AVDADMPFSGLTTFGGSFLSKFQCSQMPHPLLDEVTIVDTPGVLSGEKQRTQRSYDFTGV 312
AV ADMPF+GLT+FGG+FLSKF+CSQMPHP+LD++T+VDTPGVLSGEKQR QRSYDFTGV
Sbjct: 253 AVQADMPFNGLTSFGGAFLSKFECSQMPHPVLDQITLVDTPGVLSGEKQRMQRSYDFTGV 312
Query: 313 VSWFAAKCDLILLLFDPHKLDISDEFKRVIASLHGNDDKIRVVLNKADQVNTQQLMRVYG 372
+SWFA+KCD+ILLLFDPHKLDISDEFKRVI SL GN+DKIRVVLNKADQV+TQQLMRVYG
Sbjct: 313 ISWFASKCDMILLLFDPHKLDISDEFKRVITSLRGNEDKIRVVLNKADQVDTQQLMRVYG 372
Query: 373 ALMWSLGKVLNTPEVSRVYIGSFNDKPMD--GGCSLGRDLFEKEQNDLLADLVDIPKKAV 430
ALMWSLGKVLNTPEV RVYIGSFNDKP++ +G++LFEKEQNDLLADL+D+PKKA
Sbjct: 373 ALMWSLGKVLNTPEVVRVYIGSFNDKPINEVAVGPIGKELFEKEQNDLLADLMDVPKKAC 432
Query: 431 DRRINEFVKRARSAKIHAYIISHLKKEMPAIMGKAKAQQKLIDNLDVEFAKVQREYHLPA 490
DR+INEFVKRARSAKI+AYI+SHLKKEMPA+MGK+KAQQ+L+DNL+ EF KVQRE+HLPA
Sbjct: 433 DRKINEFVKRARSAKINAYIMSHLKKEMPAMMGKSKAQQRLMDNLEEEFGKVQREFHLPA 492
Query: 491 GDFPNVEHFKEVLSRYSIDKFEKLKPKMIQAVDDMLGYEIPELLRKFRNPYE 542
GDFP+VEHF+EVL Y+IDKFEKLKPKMIQAVDDMLGY+IP+LL+KFRNPY+
Sbjct: 493 GDFPSVEHFREVLGGYNIDKFEKLKPKMIQAVDDMLGYDIPDLLKKFRNPYD 544
>AT3G20290.2 | Symbols: ATEHD1, EHD1 | EPS15 homology domain 1 |
chr3:7075057-7078655 REVERSE LENGTH=545
Length = 545
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/545 (73%), Positives = 466/545 (85%), Gaps = 3/545 (0%)
Query: 1 MVVSKMKTTARSKSESKTYEEWFKLADSDGDGRISGNDATNFFALSNLSRSQLKQLWALA 60
M + + + SK Y+EWF+ +DSDGDGRI+GNDA FF +SNL R +LKQ+WA+A
Sbjct: 1 MEIESVAAGSCSKENQMIYKEWFEFSDSDGDGRITGNDAIKFFTMSNLPRPELKQIWAIA 60
Query: 61 DTKRQGFLSFPEFVTAMQLVSLAQAEYELNSDILKTEIDKENIKPPVMEGLDAF-AKKKS 119
D+KRQG+L F EF+ AMQLVSLAQ +E++ ++L +++D +NI PP MEGL AKKK
Sbjct: 61 DSKRQGYLGFKEFIVAMQLVSLAQTGHEISHEVLISDVDFKNINPPTMEGLGVLMAKKKH 120
Query: 120 LTINTLPEVNEIAKPQPFLANPWFAXXXXXXLPPSAVTSIVDGLKRLYNERLKPLEIAYQ 179
+ ++ P +N L WF+ + S+VTSIVDGLKRLY ++LKPLE+AY+
Sbjct: 121 SSKSSDPNMNGSPAADTSLTAHWFSSKSSKKISLSSVTSIVDGLKRLYIQKLKPLEVAYR 180
Query: 180 YNDFASPLLTSSDFDAKPMVMLLGQYSTGKTTFIKHLLKCDYPGAHVGPEPTTDRFVVVM 239
+NDF SPLLT+SDFDAKPMVMLLGQYSTGKTTFIKHLLK YPGAH+GPEPTTDRFVVVM
Sbjct: 181 FNDFVSPLLTNSDFDAKPMVMLLGQYSTGKTTFIKHLLKSTYPGAHIGPEPTTDRFVVVM 240
Query: 240 SGPDERSVPGNTIAVDADMPFSGLTTFGGSFLSKFQCSQMPHPLLDEVTIVDTPGVLSGE 299
SGPDERS+PGNT+AV ADMPFSGLTTFG +FLSKF+CSQMPHPLL+ VT VDTPGVLSGE
Sbjct: 241 SGPDERSIPGNTVAVQADMPFSGLTTFGTAFLSKFECSQMPHPLLEHVTFVDTPGVLSGE 300
Query: 300 KQRTQRSYDFTGVVSWFAAKCDLILLLFDPHKLDISDEFKRVIASLHGNDDKIRVVLNKA 359
KQRTQR+YDFTGV SWFA+KCDLILLLFDPHKLD+SDEFKRVI+SL G+DDKIRVVLNKA
Sbjct: 301 KQRTQRAYDFTGVTSWFASKCDLILLLFDPHKLDVSDEFKRVISSLRGHDDKIRVVLNKA 360
Query: 360 DQVNTQQLMRVYGALMWSLGKVLNTPEVSRVYIGSFNDKPMDGGCS--LGRDLFEKEQND 417
DQV+TQQLMRVYGALMWSLGKVLNTPEVSRVYIGSF+DKP++ + +GR+LFEKEQ+D
Sbjct: 361 DQVDTQQLMRVYGALMWSLGKVLNTPEVSRVYIGSFSDKPINEAATGPIGRELFEKEQDD 420
Query: 418 LLADLVDIPKKAVDRRINEFVKRARSAKIHAYIISHLKKEMPAIMGKAKAQQKLIDNLDV 477
LLADL DIPKKA DRRINEFVKRAR+AKIHAYIISHLKKEMPAIMGKAKAQQKLIDNL+
Sbjct: 421 LLADLKDIPKKACDRRINEFVKRARAAKIHAYIISHLKKEMPAIMGKAKAQQKLIDNLED 480
Query: 478 EFAKVQREYHLPAGDFPNVEHFKEVLSRYSIDKFEKLKPKMIQAVDDMLGYEIPELLRKF 537
EF KVQRE+HLP GDFPNV+HF+EVLS Y+IDKFEKLKPKM+Q VDDMLGY+IPELL+ F
Sbjct: 481 EFGKVQREHHLPKGDFPNVDHFREVLSGYNIDKFEKLKPKMLQTVDDMLGYDIPELLKNF 540
Query: 538 RNPYE 542
+NPY+
Sbjct: 541 KNPYD 545
>AT3G20290.1 | Symbols: ATEHD1, EHD1 | EPS15 homology domain 1 |
chr3:7075057-7078655 REVERSE LENGTH=545
Length = 545
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/545 (73%), Positives = 466/545 (85%), Gaps = 3/545 (0%)
Query: 1 MVVSKMKTTARSKSESKTYEEWFKLADSDGDGRISGNDATNFFALSNLSRSQLKQLWALA 60
M + + + SK Y+EWF+ +DSDGDGRI+GNDA FF +SNL R +LKQ+WA+A
Sbjct: 1 MEIESVAAGSCSKENQMIYKEWFEFSDSDGDGRITGNDAIKFFTMSNLPRPELKQIWAIA 60
Query: 61 DTKRQGFLSFPEFVTAMQLVSLAQAEYELNSDILKTEIDKENIKPPVMEGLDAF-AKKKS 119
D+KRQG+L F EF+ AMQLVSLAQ +E++ ++L +++D +NI PP MEGL AKKK
Sbjct: 61 DSKRQGYLGFKEFIVAMQLVSLAQTGHEISHEVLISDVDFKNINPPTMEGLGVLMAKKKH 120
Query: 120 LTINTLPEVNEIAKPQPFLANPWFAXXXXXXLPPSAVTSIVDGLKRLYNERLKPLEIAYQ 179
+ ++ P +N L WF+ + S+VTSIVDGLKRLY ++LKPLE+AY+
Sbjct: 121 SSKSSDPNMNGSPAADTSLTAHWFSSKSSKKISLSSVTSIVDGLKRLYIQKLKPLEVAYR 180
Query: 180 YNDFASPLLTSSDFDAKPMVMLLGQYSTGKTTFIKHLLKCDYPGAHVGPEPTTDRFVVVM 239
+NDF SPLLT+SDFDAKPMVMLLGQYSTGKTTFIKHLLK YPGAH+GPEPTTDRFVVVM
Sbjct: 181 FNDFVSPLLTNSDFDAKPMVMLLGQYSTGKTTFIKHLLKSTYPGAHIGPEPTTDRFVVVM 240
Query: 240 SGPDERSVPGNTIAVDADMPFSGLTTFGGSFLSKFQCSQMPHPLLDEVTIVDTPGVLSGE 299
SGPDERS+PGNT+AV ADMPFSGLTTFG +FLSKF+CSQMPHPLL+ VT VDTPGVLSGE
Sbjct: 241 SGPDERSIPGNTVAVQADMPFSGLTTFGTAFLSKFECSQMPHPLLEHVTFVDTPGVLSGE 300
Query: 300 KQRTQRSYDFTGVVSWFAAKCDLILLLFDPHKLDISDEFKRVIASLHGNDDKIRVVLNKA 359
KQRTQR+YDFTGV SWFA+KCDLILLLFDPHKLD+SDEFKRVI+SL G+DDKIRVVLNKA
Sbjct: 301 KQRTQRAYDFTGVTSWFASKCDLILLLFDPHKLDVSDEFKRVISSLRGHDDKIRVVLNKA 360
Query: 360 DQVNTQQLMRVYGALMWSLGKVLNTPEVSRVYIGSFNDKPMDGGCS--LGRDLFEKEQND 417
DQV+TQQLMRVYGALMWSLGKVLNTPEVSRVYIGSF+DKP++ + +GR+LFEKEQ+D
Sbjct: 361 DQVDTQQLMRVYGALMWSLGKVLNTPEVSRVYIGSFSDKPINEAATGPIGRELFEKEQDD 420
Query: 418 LLADLVDIPKKAVDRRINEFVKRARSAKIHAYIISHLKKEMPAIMGKAKAQQKLIDNLDV 477
LLADL DIPKKA DRRINEFVKRAR+AKIHAYIISHLKKEMPAIMGKAKAQQKLIDNL+
Sbjct: 421 LLADLKDIPKKACDRRINEFVKRARAAKIHAYIISHLKKEMPAIMGKAKAQQKLIDNLED 480
Query: 478 EFAKVQREYHLPAGDFPNVEHFKEVLSRYSIDKFEKLKPKMIQAVDDMLGYEIPELLRKF 537
EF KVQRE+HLP GDFPNV+HF+EVLS Y+IDKFEKLKPKM+Q VDDMLGY+IPELL+ F
Sbjct: 481 EFGKVQREHHLPKGDFPNVDHFREVLSGYNIDKFEKLKPKMLQTVDDMLGYDIPELLKNF 540
Query: 538 RNPYE 542
+NPY+
Sbjct: 541 KNPYD 545
>AT1G21630.1 | Symbols: | Calcium-binding EF hand family protein
| chr1:7581457-7587796 FORWARD LENGTH=1218
Length = 1218
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 55/80 (68%)
Query: 19 YEEWFKLADSDGDGRISGNDATNFFALSNLSRSQLKQLWALADTKRQGFLSFPEFVTAMQ 78
++ +F+ AD DGDG ISG +A FF SNL + L Q+W+ AD+K+ G+L EF A++
Sbjct: 13 FDTYFRRADLDGDGHISGAEAVAFFQGSNLPKHVLAQVWSYADSKKAGYLGRAEFYNALK 72
Query: 79 LVSLAQAEYELNSDILKTEI 98
LV++AQ+ EL ++I+K I
Sbjct: 73 LVTVAQSRRELTAEIVKAAI 92
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 34/62 (54%)
Query: 19 YEEWFKLADSDGDGRISGNDATNFFALSNLSRSQLKQLWALADTKRQGFLSFPEFVTAMQ 78
Y + F D+D DG+I+GN A N F L R LKQ+W L+D LS EF A+
Sbjct: 428 YTKVFVQVDTDRDGKITGNQARNLFLSWRLPRDALKQVWDLSDQDNDSMLSLREFCIAVY 487
Query: 79 LV 80
L+
Sbjct: 488 LM 489
>AT1G21630.2 | Symbols: | Calcium-binding EF hand family protein
| chr1:7581457-7587796 FORWARD LENGTH=1247
Length = 1247
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 55/80 (68%)
Query: 19 YEEWFKLADSDGDGRISGNDATNFFALSNLSRSQLKQLWALADTKRQGFLSFPEFVTAMQ 78
++ +F+ AD DGDG ISG +A FF SNL + L Q+W+ AD+K+ G+L EF A++
Sbjct: 13 FDTYFRRADLDGDGHISGAEAVAFFQGSNLPKHVLAQVWSYADSKKAGYLGRAEFYNALK 72
Query: 79 LVSLAQAEYELNSDILKTEI 98
LV++AQ+ EL ++I+K I
Sbjct: 73 LVTVAQSRRELTAEIVKAAI 92
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 34/62 (54%)
Query: 19 YEEWFKLADSDGDGRISGNDATNFFALSNLSRSQLKQLWALADTKRQGFLSFPEFVTAMQ 78
Y + F D+D DG+I+GN A N F L R LKQ+W L+D LS EF A+
Sbjct: 428 YTKVFVQVDTDRDGKITGNQARNLFLSWRLPRDALKQVWDLSDQDNDSMLSLREFCIAVY 487
Query: 79 LV 80
L+
Sbjct: 488 LM 489
>AT1G20760.1 | Symbols: | Calcium-binding EF hand family protein |
chr1:7209515-7214773 FORWARD LENGTH=1019
Length = 1019
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 8/169 (4%)
Query: 19 YEEWFKLADSDGDGRISGNDATNFFALSNLSRSQLKQLWALADTKRQGFLSFPEFVTAMQ 78
+E +FK AD DGDGRISG +A FF S LS+ L Q+W+L+D GFL F +++
Sbjct: 11 FEAYFKRADLDGDGRISGAEAVGFFQGSGLSKQVLAQIWSLSDRSHSGFLDRQNFYNSLR 70
Query: 79 LVSLAQAEYELNSDILKTEID---KENIKPPVMEGLDAFAKKK----SLTINTLPEVNEI 131
LV++AQ++ +L +I+ ++ I PP + L A + + T+ +
Sbjct: 71 LVTVAQSKRDLTPEIVNAALNTPAAAKIPPPKIN-LSAIPAPRPNPAATTVGPVSGFGGP 129
Query: 132 AKPQPFLANPWFAXXXXXXLPPSAVTSIVDGLKRLYNERLKPLEIAYQY 180
P + +F + P+ S + L+ +P ++ Q+
Sbjct: 130 GAPNAIVNQNYFPPQQNQQMRPNQGISGLTSLRPAAGPEYRPSALSGQF 178