Miyakogusa Predicted Gene

Lj6g3v1742810.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1742810.1 Non Chatacterized Hit- tr|A2X1J8|A2X1J8_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,35.84,2e-18,DUF588,Uncharacterised protein family UPF0497,
trans-membrane plant; seg,NULL; A_tha_TIGR01569: plan,CUFF.59853.1
         (202 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G35760.1 | Symbols:  | Uncharacterised protein family (UPF049...   234   3e-62
AT4G16442.1 | Symbols:  | Uncharacterised protein family (UPF049...   202   2e-52
AT4G25830.1 | Symbols:  | Uncharacterised protein family (UPF049...    66   2e-11
AT1G17200.1 | Symbols:  | Uncharacterised protein family (UPF049...    60   1e-09
AT2G27370.1 | Symbols:  | Uncharacterised protein family (UPF049...    55   2e-08
AT4G15630.1 | Symbols:  | Uncharacterised protein family (UPF049...    53   1e-07
AT5G15290.1 | Symbols:  | Uncharacterised protein family (UPF049...    51   4e-07

>AT2G35760.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr2:15032059-15033094 FORWARD LENGTH=201
          Length = 201

 Score =  234 bits (598), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 114/202 (56%), Positives = 138/202 (68%), Gaps = 1/202 (0%)

Query: 1   MSYLGVGVSPGTVPVYHNTNLKVWDRKIRITELVLRCXXXXXXXXXXXXXXTDSQVKVFF 60
           MSYLGVGVSPG V     T +K+ DRK+R+TEL+LRC              TD QV+  F
Sbjct: 1   MSYLGVGVSPGNVS-GSTTKMKLIDRKVRVTELILRCLVCVLALVAAILIATDVQVREIF 59

Query: 61  TIQKKAKFTDMKSLVFLVIANGLVAGYSLIQGMRCVVSMIRGKVLFSKPLAWAIFSGDQV 120
            IQKKAKFTDMK+LV LV+ NG+ AGYSL+Q +RCVV +++G+VLFSKPLAWAIF GDQ 
Sbjct: 60  MIQKKAKFTDMKALVLLVVVNGIAAGYSLVQAVRCVVGLMKGRVLFSKPLAWAIFFGDQA 119

Query: 121 MXXXXXXXXXXXXXXXXXXKLGQPELQWMKICDMYGKFCNQVGEGLASAFLASLSMVVLS 180
           +                  KLG+PELQWMKIC+MYGKFCNQVGEG+ASA  A + MV++S
Sbjct: 120 VAYLCVAGVAAAAQSAAFAKLGEPELQWMKICNMYGKFCNQVGEGIASALFACIGMVLIS 179

Query: 181 CISAFSLFRLYNGGNKIKNPNW 202
           CISAF +FRLY G     +  W
Sbjct: 180 CISAFGVFRLYGGSKSRPSSRW 201


>AT4G16442.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr4:9272042-9272970 REVERSE LENGTH=182
          Length = 182

 Score =  202 bits (513), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 93/182 (51%), Positives = 124/182 (68%)

Query: 21  LKVWDRKIRITELVLRCXXXXXXXXXXXXXXTDSQVKVFFTIQKKAKFTDMKSLVFLVIA 80
           +K+ DR++R+TEL+LRC              TD++VK+ FTI+K AK+TDMK++VFLV+A
Sbjct: 1   MKLIDRRMRLTELLLRCSISVFALLALILVVTDTEVKLIFTIKKTAKYTDMKAVVFLVVA 60

Query: 81  NGLVAGYSLIQGMRCVVSMIRGKVLFSKPLAWAIFSGDQVMXXXXXXXXXXXXXXXXXXK 140
           NG+ A YSL+Q +RCVV  ++GKVLFSKPLAWA FSGDQ M                  +
Sbjct: 61  NGIAAVYSLLQSVRCVVGTMKGKVLFSKPLAWAFFSGDQAMAYLNVAAIAATAESGVIAR 120

Query: 141 LGQPELQWMKICDMYGKFCNQVGEGLASAFLASLSMVVLSCISAFSLFRLYNGGNKIKNP 200
            G+ +LQWM++C MYGKFCNQ+  G++SA LAS++MV +SCISAFSLFRLY      +  
Sbjct: 121 EGEEDLQWMRVCTMYGKFCNQMAIGVSSALLASIAMVFVSCISAFSLFRLYGATKDRRTT 180

Query: 201 NW 202
            W
Sbjct: 181 PW 182


>AT4G25830.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr4:13133727-13134790 FORWARD LENGTH=175
          Length = 175

 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 76/173 (43%), Gaps = 18/173 (10%)

Query: 27  KIRITELVLRCXXXXXXXXXXXXXXTDSQVKVFFTIQKKAKFTDMKSLVFLVIANGLVAG 86
           K+R TE++LR                DSQ K    I K   F  + +L   +  + +VA 
Sbjct: 3   KLRETEVILRLCIVFFLLLTSCLIGLDSQTKEIAYIHKNVSFRYLLALEAELYIDVVVAA 62

Query: 87  YSLIQ---GMRCVVSMIRGKVLFSKPL----AWAIFSGDQVMXXXXXXXXXXXXXXXXXX 139
           Y+L+Q   G   V         FS  L    A+ +F+G                      
Sbjct: 63  YNLVQLGLGWYNVEQKTSNPKWFSYLLDQTAAYVVFAGTSAAAQHSLLVVT--------- 113

Query: 140 KLGQPELQWMKICDMYGKFCNQVGEGLASAFLASLSMVVLSCISAFSLFRLYN 192
             G  ELQWMK C  + +FC Q+G  +   ++A+  MV+LS ISAF+LFRLY+
Sbjct: 114 --GSRELQWMKWCYKFTRFCFQMGSAIILNYIAAALMVLLSSISAFNLFRLYS 164


>AT1G17200.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr1:5878493-5879871 FORWARD LENGTH=204
          Length = 204

 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 66/165 (40%), Gaps = 8/165 (4%)

Query: 28  IRITELVLRCXXXXXXXXXXXXXXTDSQVKVFFTIQKKAKFTDMKSLVFLVIANGLVAGY 87
           IR  E +LR                DS+   F +I     ++++ +  +LV ANG+ AGY
Sbjct: 30  IRTAETMLRLAPVGLCVAALVVMLKDSETNEFGSIS----YSNLTAFRYLVHANGICAGY 85

Query: 88  SLIQGMRCVVSMIRGKVLFSKPLAWAIFSGDQVMXXXXXXXXXXXXXXXXXXKLGQPELQ 147
           SL+     + +M R     + P  W  F  DQ++                    G   + 
Sbjct: 86  SLLSA--AIAAMPRSSS--TMPRVWTFFCLDQLLTYLVLAAGAVSAEVLYLAYNGDSAIT 141

Query: 148 WMKICDMYGKFCNQVGEGLASAFLASLSMVVLSCISAFSLFRLYN 192
           W   C  YG FC++    +   F      +VLS IS++ LF  ++
Sbjct: 142 WSDACSSYGGFCHRATASVIITFFVVCFYIVLSLISSYKLFTRFD 186


>AT2G27370.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr2:11708628-11709905 REVERSE LENGTH=221
          Length = 221

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 5/168 (2%)

Query: 24  WDRKIRITELVLRCXXXXXXXXXXXXXXTDSQVKVFFT--IQKKAKFTDMKSLVFLVIAN 81
           W R + I + VLR               T  +   FFT  +Q +A +TD+ ++   VI N
Sbjct: 55  WKRGVAIFDFVLRLIAAITAMAAAAKMATTEETLPFFTQFLQFQADYTDLPTMSSFVIVN 114

Query: 82  GLVAGYSLIQGMRCVVSMIRGKVLFSKPLAWAIFSGDQVMXXXXXXXXXXXXXXXXXXKL 141
            +V GY  +     +V ++R   L   P  + I   D VM                    
Sbjct: 115 SIVGGYLTLSLPFSIVCILRP--LAVPPRLFLILC-DTVMMGLTLMAASASAAIVYLAHN 171

Query: 142 GQPELQWMKICDMYGKFCNQVGEGLASAFLASLSMVVLSCISAFSLFR 189
           G     W+ +C  +G FC      + ++F+A+  ++ L  +SAF+L R
Sbjct: 172 GNSSSNWLPVCQQFGDFCQGTSGAVVASFIAATLLMFLVILSAFALKR 219


>AT4G15630.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr4:8917527-8918683 FORWARD LENGTH=190
          Length = 190

 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 6/129 (4%)

Query: 60  FTIQKKAKFTDMKSLVFLVIANGLVAGYSLIQGMRCVVSMI-RGKVLFSKPLAWAIFSGD 118
             +   AK + + + V+ + AN +  GY+ I     V+ MI +GK   SK L  A+  GD
Sbjct: 66  LNVSTTAKASYLSAFVYNISANAIACGYTAIS---IVIVMISKGK--RSKSLLMAVLIGD 120

Query: 119 QVMXXXXXXXXXXXXXXXXXXKLGQPELQWMKICDMYGKFCNQVGEGLASAFLASLSMVV 178
            +M                  + G   + W K+C ++GKFCNQ    +A   +AS+  ++
Sbjct: 121 LMMVALLFSSTGAAGAIGLMGRHGNKHVMWKKVCGVFGKFCNQAAVSVAITLIASVVFML 180

Query: 179 LSCISAFSL 187
           L  + A  L
Sbjct: 181 LVVLDALKL 189


>AT5G15290.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr5:4967094-4967846 FORWARD LENGTH=187
          Length = 187

 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 60/150 (40%), Gaps = 5/150 (3%)

Query: 23  VWDRKIRITELVLRCXXXXXXXXXXXXXXTDSQVKVFFT--IQKKAKFTDMKSLVFLVIA 80
           +  R+I I E +LR               T  +   FFT  I+ +A++ D+ +L F V+A
Sbjct: 20  LMSRRIAILEFILRIVAFFNTIGSAILMGTTHETLPFFTQFIRFQAEYNDLPALTFFVVA 79

Query: 81  NGLVAGYSLIQGMRCVVSMIRGKVLFSKPLAWAIFSGDQVMXXXXXXXXXXXXXXXXXXK 140
           N +V+GY ++      V +++ K   ++ L   +   D  M                   
Sbjct: 80  NAVVSGYLILSLTLAFVHIVKRKTQNTRILLIIL---DVAMLGLLTSGASSAAAIVYLAH 136

Query: 141 LGQPELQWMKICDMYGKFCNQVGEGLASAF 170
            G  +  W  IC  +  FC ++   L  +F
Sbjct: 137 NGNNKTNWFAICQQFNSFCERISGSLIGSF 166