Miyakogusa Predicted Gene

Lj6g3v1742770.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1742770.1 Non Chatacterized Hit- tr|B9G3I3|B9G3I3_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,36.3,2e-17,Tudor-like domain present in plant
sequences,Tudor-like, plant; seg,NULL; Agenet,Agenet-like
domain,NODE_13386_length_2477_cov_51.039967.path2.1
         (343 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G55600.3 | Symbols:  | agenet domain-containing protein / bro...   162   3e-40
AT5G55600.2 | Symbols:  | agenet domain-containing protein / bro...   162   3e-40
AT5G55600.1 | Symbols:  | agenet domain-containing protein / bro...   162   3e-40
AT1G68580.2 | Symbols:  | agenet domain-containing protein / bro...   140   1e-33
AT1G68580.1 | Symbols:  | agenet domain-containing protein / bro...   120   1e-27
AT4G17330.1 | Symbols: ATG2484-1, G2484-1 | G2484-1 protein | ch...    69   5e-12
AT1G09320.1 | Symbols:  | agenet domain-containing protein | chr...    58   1e-08
AT5G58610.1 | Symbols:  | PHD finger transcription factor, putat...    51   9e-07
AT1G26540.1 | Symbols:  | Agenet domain-containing protein | chr...    48   9e-06

>AT5G55600.3 | Symbols:  | agenet domain-containing protein /
           bromo-adjacent homology (BAH) domain-containing protein
           | chr5:22522232-22524796 REVERSE LENGTH=663
          Length = 663

 Score =  162 bits (410), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 87/195 (44%), Positives = 114/195 (58%), Gaps = 4/195 (2%)

Query: 4   MEKYEPKYPSLKLKLSRKTM-GITVIGPKP--EESLKVGDKIEVLSNDSGIRGCWFRCKI 60
           +  YE     LKL  S K     T +   P     +K   KIE L  DSGIRGCWFRC +
Sbjct: 346 LTTYESSCKRLKLNASGKRFPSPTNVQKHPCYNGVVKTDAKIEFLCQDSGIRGCWFRCTV 405

Query: 61  LSMSQRRLKVLHEDVMDVDDEGKLEEWVPASRVAAPDKLGMRCSGRLTVRPSPPEY-TAG 119
           L +S++++K+ ++D+ D D  G LEEWVPA + A PDKLG+R S R T+RP+P +  TA 
Sbjct: 406 LDVSRKQVKLQYDDIEDEDGYGNLEEWVPAFKSAMPDKLGIRLSNRPTIRPAPRDVKTAY 465

Query: 120 DTFEVGAAVDAWWCDGWWEGVITAVNPSGDGKLQVYCPGEEXXXXXXXXXXRISRDWIEN 179
               +G AVDAWW DGWWEGV+ A        L++Y PGE           RISRDW+ +
Sbjct: 466 FDLTIGEAVDAWWNDGWWEGVVIATGKPDTEDLKIYIPGENLCLTVLRKDIRISRDWVGD 525

Query: 180 KWVDIMGKPDICSYL 194
            WVDI  KP+I + +
Sbjct: 526 SWVDIDPKPEILAIV 540


>AT5G55600.2 | Symbols:  | agenet domain-containing protein /
           bromo-adjacent homology (BAH) domain-containing protein
           | chr5:22522232-22524796 REVERSE LENGTH=663
          Length = 663

 Score =  162 bits (410), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 87/195 (44%), Positives = 114/195 (58%), Gaps = 4/195 (2%)

Query: 4   MEKYEPKYPSLKLKLSRKTM-GITVIGPKP--EESLKVGDKIEVLSNDSGIRGCWFRCKI 60
           +  YE     LKL  S K     T +   P     +K   KIE L  DSGIRGCWFRC +
Sbjct: 346 LTTYESSCKRLKLNASGKRFPSPTNVQKHPCYNGVVKTDAKIEFLCQDSGIRGCWFRCTV 405

Query: 61  LSMSQRRLKVLHEDVMDVDDEGKLEEWVPASRVAAPDKLGMRCSGRLTVRPSPPEY-TAG 119
           L +S++++K+ ++D+ D D  G LEEWVPA + A PDKLG+R S R T+RP+P +  TA 
Sbjct: 406 LDVSRKQVKLQYDDIEDEDGYGNLEEWVPAFKSAMPDKLGIRLSNRPTIRPAPRDVKTAY 465

Query: 120 DTFEVGAAVDAWWCDGWWEGVITAVNPSGDGKLQVYCPGEEXXXXXXXXXXRISRDWIEN 179
               +G AVDAWW DGWWEGV+ A        L++Y PGE           RISRDW+ +
Sbjct: 466 FDLTIGEAVDAWWNDGWWEGVVIATGKPDTEDLKIYIPGENLCLTVLRKDIRISRDWVGD 525

Query: 180 KWVDIMGKPDICSYL 194
            WVDI  KP+I + +
Sbjct: 526 SWVDIDPKPEILAIV 540


>AT5G55600.1 | Symbols:  | agenet domain-containing protein /
           bromo-adjacent homology (BAH) domain-containing protein
           | chr5:22522232-22524796 REVERSE LENGTH=663
          Length = 663

 Score =  162 bits (410), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 87/195 (44%), Positives = 114/195 (58%), Gaps = 4/195 (2%)

Query: 4   MEKYEPKYPSLKLKLSRKTM-GITVIGPKP--EESLKVGDKIEVLSNDSGIRGCWFRCKI 60
           +  YE     LKL  S K     T +   P     +K   KIE L  DSGIRGCWFRC +
Sbjct: 346 LTTYESSCKRLKLNASGKRFPSPTNVQKHPCYNGVVKTDAKIEFLCQDSGIRGCWFRCTV 405

Query: 61  LSMSQRRLKVLHEDVMDVDDEGKLEEWVPASRVAAPDKLGMRCSGRLTVRPSPPEY-TAG 119
           L +S++++K+ ++D+ D D  G LEEWVPA + A PDKLG+R S R T+RP+P +  TA 
Sbjct: 406 LDVSRKQVKLQYDDIEDEDGYGNLEEWVPAFKSAMPDKLGIRLSNRPTIRPAPRDVKTAY 465

Query: 120 DTFEVGAAVDAWWCDGWWEGVITAVNPSGDGKLQVYCPGEEXXXXXXXXXXRISRDWIEN 179
               +G AVDAWW DGWWEGV+ A        L++Y PGE           RISRDW+ +
Sbjct: 466 FDLTIGEAVDAWWNDGWWEGVVIATGKPDTEDLKIYIPGENLCLTVLRKDIRISRDWVGD 525

Query: 180 KWVDIMGKPDICSYL 194
            WVDI  KP+I + +
Sbjct: 526 SWVDIDPKPEILAIV 540


>AT1G68580.2 | Symbols:  | agenet domain-containing protein /
           bromo-adjacent homology (BAH) domain-containing protein
           | chr1:25752869-25755631 FORWARD LENGTH=648
          Length = 648

 Score =  140 bits (354), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 73/163 (44%), Positives = 98/163 (60%), Gaps = 6/163 (3%)

Query: 34  ESLKVGDKIEVLSNDSGIRGCWFRCKILSMSQRRLKVLHEDVMDVDDEG-KLEEWVPASR 92
             +K G  IEVLS DSGIRGCWF+  +L   + ++KV ++D+ D DDE  KLEEW+  SR
Sbjct: 361 HHIKKGSLIEVLSEDSGIRGCWFKALVLKKHKDKVKVQYQDIQDADDESKKLEEWILTSR 420

Query: 93  VAAPDKLG-MRCSGRLTVRP--SPPEYTAGDTFEVGAAVDAWWCDGWWEGVITAVNPSGD 149
           VAA D LG +R  GR  VRP   P +        VG  VD WWCDGWWEG++  V    +
Sbjct: 421 VAAGDHLGDLRIKGRKVVRPMLKPSKENDVCVIGVGMPVDVWWCDGWWEGIV--VQEVSE 478

Query: 150 GKLQVYCPGEEXXXXXXXXXXRISRDWIENKWVDIMGKPDICS 192
            K +VY PGE+          R SR+W++++W++I  + DI S
Sbjct: 479 EKFEVYLPGEKKMSAFHRNDLRQSREWLDDEWLNIRSRSDIVS 521


>AT1G68580.1 | Symbols:  | agenet domain-containing protein /
           bromo-adjacent homology (BAH) domain-containing protein
           | chr1:25753582-25755059 FORWARD LENGTH=396
          Length = 396

 Score =  120 bits (302), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/130 (49%), Positives = 80/130 (61%), Gaps = 6/130 (4%)

Query: 34  ESLKVGDKIEVLSNDSGIRGCWFRCKILSMSQRRLKVLHEDVMDVDDEG-KLEEWVPASR 92
             +K G  IEVLS DSGIRGCWF+  +L   + ++KV ++D+ D DDE  KLEEW+  SR
Sbjct: 265 HHIKKGSLIEVLSEDSGIRGCWFKALVLKKHKDKVKVQYQDIQDADDESKKLEEWILTSR 324

Query: 93  VAAPDKLG-MRCSGRLTVRP--SPPEYTAGDTFEVGAAVDAWWCDGWWEGVITAVNPSGD 149
           VAA D LG +R  GR  VRP   P +        VG  VD WWCDGWWEG++  V    +
Sbjct: 325 VAAGDHLGDLRIKGRKVVRPMLKPSKENDVCVIGVGMPVDVWWCDGWWEGIV--VQEVSE 382

Query: 150 GKLQVYCPGE 159
            K +VY PGE
Sbjct: 383 EKFEVYLPGE 392


>AT4G17330.1 | Symbols: ATG2484-1, G2484-1 | G2484-1 protein |
            chr4:9689263-9697172 REVERSE LENGTH=2037
          Length = 2037

 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 68/164 (41%), Gaps = 23/164 (14%)

Query: 34   ESLKVGDKIEVLSNDSGIRGCWFRCKILSMSQRRLKVLHEDVMDVDDEGKLEEWV----- 88
            E +K G  +EV   + G+R  W+   +LS+   +  VL  D+       KL+EWV     
Sbjct: 1571 EDIKEGSNVEVFKEEPGLRTAWYSANVLSLEDDKAYVLFSDLSVEQGTDKLKEWVALKGE 1630

Query: 89   --------PASRVAAPDKLGMRCSGRLTVRPSPPEYTAGDTF-EVGAAVDAWWCDGWWEG 139
                    PA  V A    G R   R  +         GD   ++G  VD+W  D W EG
Sbjct: 1631 GDQAPKIRPARSVTALPYEGTRKRRRAAL---------GDHIWKIGDRVDSWVHDSWLEG 1681

Query: 140  VITAVNPSGDGKLQVYCPGEEXXXXXXXXXXRISRDWIENKWVD 183
            VIT  N   +  + V+ P EE          R S  W + KW++
Sbjct: 1682 VITEKNKKDENTVTVHFPAEEETLTIKAWNLRPSLVWKDGKWIE 1725


>AT1G09320.1 | Symbols:  | agenet domain-containing protein |
           chr1:3010270-3012228 REVERSE LENGTH=517
          Length = 517

 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 20/144 (13%)

Query: 39  GDKIEVLSNDSGIRGCWFRCKILS-MSQRRLKVLHEDVMDVDDEGKLEEWVPASRVAAPD 97
           G  +EV S++ G +GCWF  K++  + + +  V + D+ + D    L+E           
Sbjct: 224 GTVVEVSSDEEGFQGCWFAAKVVEPVGEDKFLVEYRDLREKDGIEPLKE----------- 272

Query: 98  KLGMRCSGRLTVRPSPPEYTAGDTFEVGAAVDAWWCDGWWEGVITAVNPSGDGKLQVYCP 157
                 +  L +RP PP     D F VG  ++A++ DGWW GV+  ++    G + +Y  
Sbjct: 273 -----ETDFLHIRPPPPRDEDID-FAVGDKINAFYNDGWWVGVV--IDGMKHGTVGIYFR 324

Query: 158 GEEXXXXXXXXXXRISRDWIENKW 181
             +          R+ +DW++  W
Sbjct: 325 QSQEKMRFGRQGLRLHKDWVDGTW 348



 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 26/155 (16%)

Query: 36  LKVGDKIEVLSNDSGIRGCWFRCKILSMSQRRLK-----VLHEDVMDVDDEGK--LEEWV 88
           LK G  +E+ S++ G RG W+  K++++     K      +    +  D EG   L+E V
Sbjct: 39  LKPGSAVEISSDEIGFRGSWYMGKVITIPSSSDKDSVKCQVEYTTLFFDKEGTKPLKEVV 98

Query: 89  PASRVAAPDKLGMRCSGRLTVRPSPP--EYTAGDTFEVGAAVDAWWCDGWWEGVITAVNP 146
             S++  P               +PP  E        VG  VDA++ DGWWEG +T V  
Sbjct: 99  DMSQLRPP---------------APPMSEIEKKKKIVVGEEVDAFYNDGWWEGDVTEV-- 141

Query: 147 SGDGKLQVYCPGEEXXXXXXXXXXRISRDWIENKW 181
             DGK  V+    +          R  R+W++  W
Sbjct: 142 LDDGKFSVFFRSSKEQIRFRKDELRFHREWVDGAW 176



 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 60/152 (39%), Gaps = 21/152 (13%)

Query: 33  EESLKVGDKIEVLSNDSGIRGCWFRCKILSMSQRRLKVLHEDVMDVDDEGK--LEEWVPA 90
           +++  +G  IEV   + G    WF  K++    +   ++  D +  +D GK  L E V  
Sbjct: 377 KQAFSIGTPIEVSPEEEGFEDSWFLAKLIEYRGKDKCLVEYDNLKAED-GKEPLREEVNV 435

Query: 91  SRVAAPDKLGMRCSGRLTVRPSPPEYTAGDTFEVGAAVDAWWCDGWWEGVITAVNPSGDG 150
           SR+                RP P E      FE    V+A + DGWW GVI  V      
Sbjct: 436 SRI----------------RPLPLESVMVSPFERHDKVNALYNDGWWVGVIRKV--LAKS 477

Query: 151 KLQVYCPGEEXXXXXXXXXXRISRDWIENKWV 182
              V     +          R+ ++WI+ KW+
Sbjct: 478 SYLVLFKNTQELLKFHHSQLRLHQEWIDGKWI 509


>AT5G58610.1 | Symbols:  | PHD finger transcription factor, putative
           | chr5:23686771-23691053 REVERSE LENGTH=1065
          Length = 1065

 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 13/154 (8%)

Query: 37  KVGDKIEVLSN--------DSGIRGCWFRCKILSMSQRRLKVL-HEDVMDVDDEGKLEEW 87
           +V   + +LSN        + G  G W+   + S  +RR + + +++++  D  G L E 
Sbjct: 10  RVFHFLNLLSNFGFFSRSLEEGSLGSWYLGTVTSAKKRRRRCIRYDNILSDDGSGNLVET 69

Query: 88  VPASRVA--APDKLGMRCSGRLTVRPSPPEY-TAGDTFEVGAAVDAWWCDGWWEGVITAV 144
           V  S +     D   +  + R  +RP PP+   A      G  VD ++ D WWEGV+   
Sbjct: 70  VDVSDIVEGLDDCTDVSDTFRGRLRPVPPKLDVAKLNLAYGLCVDVFFSDAWWEGVLFD- 128

Query: 145 NPSGDGKLQVYCPGEEXXXXXXXXXXRISRDWIE 178
           + +G  K +V+ P             RI++DW E
Sbjct: 129 HENGSEKRRVFFPDLGDELDADLQSLRITQDWNE 162


>AT1G26540.1 | Symbols:  | Agenet domain-containing protein |
           chr1:9167783-9170795 REVERSE LENGTH=695
          Length = 695

 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 51/120 (42%), Gaps = 24/120 (20%)

Query: 42  IEVLSNDSGIRGCWFRCKIL----SMSQRRLKVLHEDVMDVDDEGKLEEWVPASRVAAPD 97
           +EV S + G  G WFR  +     + S+R+L+V +  ++D+D    L E +         
Sbjct: 14  VEVSSEEEGFEGAWFRAVLEENPGNSSRRKLRVRYSTLLDMDGSSPLIEHIE-------- 65

Query: 98  KLGMRCSGRLTVRPSPPEYTAGD--TFEVGAAVDAWWCDGWWEGVITAVNPSGDGKLQVY 155
                   +  +RP PPE         E G  VDA   DGWW GV+  V    D    VY
Sbjct: 66  --------QRFIRPVPPEENQQKDVVLEEGLLVDADHKDGWWTGVV--VKKMEDDNYLVY 115