Miyakogusa Predicted Gene
- Lj6g3v1722650.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1722650.1 Non Chatacterized Hit- tr|K4BKL5|K4BKL5_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,25.24,2e-18,Small MutS-related domain,Smr protein/MutS2
C-terminal; PPR_2,Pentatricopeptide repeat;
PPR,Pentatri,NODE_42601_length_2165_cov_10.750577.path2.1
(566 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 629 e-180
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 349 3e-96
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 155 6e-38
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 9e-32
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 128 1e-29
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 5e-29
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 122 9e-28
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 118 1e-26
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 7e-26
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 113 3e-25
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 112 5e-25
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 112 5e-25
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 2e-24
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 3e-24
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 110 3e-24
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 4e-24
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 4e-24
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 6e-24
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 7e-24
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 106 5e-23
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 7e-23
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 7e-23
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 105 8e-23
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 4e-22
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 7e-22
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 7e-22
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 9e-22
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 2e-21
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 2e-21
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 4e-21
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 100 5e-21
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 5e-21
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 99 7e-21
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 9e-21
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 1e-20
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 1e-20
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 2e-20
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 2e-20
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 2e-20
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 3e-20
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 4e-20
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 96 6e-20
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 8e-20
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 9e-20
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 2e-19
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 4e-19
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 7e-19
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 9e-19
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 92 1e-18
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 5e-18
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 9e-18
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 9e-18
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 1e-17
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 89 1e-17
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 1e-17
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 88 2e-17
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 87 4e-17
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 5e-17
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 86 6e-17
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 6e-17
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 86 1e-16
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 85 1e-16
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 1e-16
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 1e-16
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 84 2e-16
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 84 2e-16
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 4e-16
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 7e-16
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 82 1e-15
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 81 2e-15
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 80 3e-15
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 4e-15
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 80 5e-15
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 77 2e-14
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 4e-14
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 77 4e-14
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 77 4e-14
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 76 5e-14
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 8e-14
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 75 9e-14
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 73 4e-13
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 73 6e-13
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 8e-13
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 71 2e-12
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 3e-12
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 66 6e-11
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 66 7e-11
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 64 2e-10
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 64 3e-10
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 63 5e-10
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 62 7e-10
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 62 8e-10
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 62 9e-10
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 62 1e-09
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 62 1e-09
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 62 1e-09
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 61 2e-09
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 61 2e-09
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 60 3e-09
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-09
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 60 4e-09
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 5e-09
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 59 9e-09
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 59 1e-08
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 58 1e-08
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 58 1e-08
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 58 2e-08
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 4e-08
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 4e-08
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 8e-08
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 9e-08
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 55 1e-07
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 55 2e-07
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-07
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 54 2e-07
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 54 3e-07
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-07
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 5e-07
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 53 5e-07
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 53 7e-07
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 52 8e-07
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 52 8e-07
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 52 8e-07
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 52 8e-07
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 52 9e-07
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 52 1e-06
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 52 1e-06
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 6e-06
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 629 bits (1622), Expect = e-180, Method: Compositional matrix adjust.
Identities = 314/553 (56%), Positives = 403/553 (72%), Gaps = 4/553 (0%)
Query: 1 MENSETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPD 60
M N ETAP+VL L + +KP+R E++LYNV MKVF+K KD E +EKLFDEML+R +KPD
Sbjct: 152 MTNPETAPLVLNNLLETMKPSR--EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPD 209
Query: 61 NVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYD 120
N TF T+I+CAR + RAVEWFEKM FGCEPD VT A +I AY R NVDMA LYD
Sbjct: 210 NATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYD 269
Query: 121 RAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRAR 180
RA+TE WR+D VTFS LI++YG+ +YD CLN+Y++MK LGVKPNL YN L+ ++ RA+
Sbjct: 270 RARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAK 329
Query: 181 KPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCN 240
+P AK+IY+++ NG +P++ TY+ L+RAY +DAL IYREMKE + +TV L N
Sbjct: 330 RPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYN 389
Query: 241 LLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIE 300
LLSMCAD ++DEA EIF+D+K+ PD TFSSLITVY+C +VSEAEA L +M E
Sbjct: 390 TLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMRE 449
Query: 301 SGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPMEEL 360
+GF+P +FV+T +++CYG + L+ GI PD C CLLN+MT+TP EE+
Sbjct: 450 AGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLNVMTQTPSEEI 509
Query: 361 GKLIDCIEKANEELGSVVRYLVEGQEEGDQDFIKETSALLNSTDAEIKKPLCNCLIDLCV 420
GKLI C+EKA +LG VV+ LVE Q + F KE S L++S +++KK NCLIDLCV
Sbjct: 510 GKLIGCVEKAKPKLGQVVKMLVEEQNCEEGVFKKEASELIDSIGSDVKKAYLNCLIDLCV 569
Query: 421 YLNLPNRARELFDLGSTLEIYKDVQFRAPTQWSLHLRRLSVGAAMTALHVWINDLCK-AL 479
LN RA E+ LG +IY +Q ++ TQWSLHL+ LS+GAA+TALHVW+NDL + AL
Sbjct: 570 NLNKLERACEILQLGLEYDIYTGLQSKSATQWSLHLKSLSLGAALTALHVWMNDLSEAAL 629
Query: 480 ESGEELPS-LGINTGIGKYQFSDKGLASVFESHLKKLKAPFHEAPDKPGWFFISKKAAKS 538
ESGEE P LGINTG GK+++SDKGLA+VFESHLK+L APFHEAPDK GWF + AAK+
Sbjct: 630 ESGEEFPPLLGINTGHGKHKYSDKGLAAVFESHLKELNAPFHEAPDKVGWFLTTSVAAKA 689
Query: 539 WLKSRGSAKSIAA 551
WL+SR SA ++A
Sbjct: 690 WLESRRSAGGVSA 702
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 349 bits (896), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 199/555 (35%), Positives = 317/555 (57%), Gaps = 18/555 (3%)
Query: 3 NSETAPVVLRYLRD-----------KIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDE 51
N + A +VL LR+ K K E + YNV MK + + F+ E++ E
Sbjct: 152 NRDNALLVLNSLREWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALE 211
Query: 52 MLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVEN 111
M++ ++ DN+T++T+I CA+ C++ ++A+EWFE+M G PD VT + ++ Y++
Sbjct: 212 MVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGK 271
Query: 112 VDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNT 171
V+ LY+RA W+ D + FS L KM+G DYD V +MK + VKPN+ YNT
Sbjct: 272 VEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNT 331
Query: 172 LLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENR 231
LL A+ RA KP LA+ ++ EM G++P+ T + L++ Y DAL ++ EMK +
Sbjct: 332 LLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKK 391
Query: 232 IGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEA 291
+ L N LL+MCAD+G +EA +F D+K S +PD ++++++ +Y K +A
Sbjct: 392 WPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKA 451
Query: 292 EAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNI 351
+ EM+++G + N+ T LV+C G + G+ PD C CLL++
Sbjct: 452 MELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSV 511
Query: 352 MTK-TPMEELGKLIDCIEKANEELGSVVRYLVEGQEEGDQDFIKETSAL-LNSTDAEIKK 409
M E+ K++ C+E+AN++L + V +V+ E+ + + +KE L +N+T E ++
Sbjct: 512 MALCESSEDAEKVMACLERANKKLVTFVNLIVD--EKTEYETVKEEFKLVINATQVEARR 569
Query: 410 PLCNCLIDLCVYLNLPNRARELFDLGSTLEIYKDVQFRAPTQWSLHLRRLSVGAAMTALH 469
P CNCLID+C N RA EL LG+ +Y + + +WSL +R LSVGAA TAL
Sbjct: 570 PFCNCLIDICRGNNRHERAHELLYLGTLFGLYPGLHNKTIKEWSLDVRSLSVGAAETALE 629
Query: 470 VWINDLCKALESGEELPSLGI-NTGIGKYQFSDKGLASVFESHLKKLKAPFHEAPDKPGW 528
W+ L ++ EELP L + TG G ++FS +GLA+ F HL++L APF ++ D+PG
Sbjct: 630 EWMRTLANIIKRQEELPELFLAQTGTGTHRFS-QGLANSFALHLQQLSAPFRQS-DRPGI 687
Query: 529 FFISKKAAKSWLKSR 543
F +K+ SWL+S+
Sbjct: 688 FVATKEDLVSWLESK 702
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 143/584 (24%), Positives = 251/584 (42%), Gaps = 42/584 (7%)
Query: 1 MENSETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPD 60
ME + A R+ ++P R + +N + V + +E A LFDEM R+++ D
Sbjct: 318 MEFKQVAKFFDEMQRNGVQPDR----ITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQD 373
Query: 61 NVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYD 120
++ T+++ D A E +MP P+ V+ +TVI +A+ D A L+
Sbjct: 374 VFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFG 433
Query: 121 RAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRAR 180
+ LD V+++ L+ +Y + ++ L++ +M +G+K ++ TYN LL +
Sbjct: 434 EMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQG 493
Query: 181 KPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCN 240
K K ++ EMKR + P+ +TYSTL+ Y G L ++A+ I+RE K + V L +
Sbjct: 494 KYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYS 553
Query: 241 LLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITV------------YSCFAKV 288
L+ G + AV + +++ GI P+ T++S+I YS +
Sbjct: 554 ALIDALCKNGLVGSAVSLIDEMTKEGI-SPNVVTYNSIIDAFGRSATMDRSADYSNGGSL 612
Query: 289 SEAEAMLNEMIESGFKPNIFVITPLVK---------CYGXXXXXXXXXXXXXRGLDWGIV 339
+ + L+ + E+ I + L C + I
Sbjct: 613 PFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIK 672
Query: 340 PDGHCCCCLLNIMTK-TPMEELGKLIDCIEKANEELGSVVRYLVEGQEEGDQDFIKETSA 398
P+ +LN ++ E+ L++ + + ++ VV L+ GQ E +
Sbjct: 673 PNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQRENVWLQAQSLFD 732
Query: 399 LLNSTDAEIKKPLCNCLIDLCVYLNLPNRARELFDL-GSTLEIYKDVQFRAPTQWS---L 454
+N D N L D+ + R EL L G + +++++V WS L
Sbjct: 733 KVNEMDGSTASAFYNALTDMLWHFG-QKRGAELVALEGRSRQVWENV-------WSDSCL 784
Query: 455 HLRRLSVGAAMTALHVWINDLCKALESGEELPS-LGINTGIGKYQ--FSDKGLASVFESH 511
L +S GAA +H W+ ++ + G ELP L I TG GK+ D L E
Sbjct: 785 DLHLMSSGAARAMVHAWLLNIRSIVYEGHELPKVLSILTGWGKHSKVVGDGALRRAVEVL 844
Query: 512 LKKLKAPFHEAPDKPGWFFISKKAAKSWLKSRGSAKSIAALDSL 555
L+ + APFH + G F S +WL+ + K + D +
Sbjct: 845 LRGMDAPFHLSKCNMGRFTSSGSVVATWLRESATLKLLILHDHI 888
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 39/257 (15%)
Query: 99 CATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMK 158
+ +I R V +A+R+++ A + FSALI YG +++ ++V++ MK
Sbjct: 236 ASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMK 295
Query: 159 VLGVKPNLGTYNTLLPAVYRARKPL--LAKLIYEEMKRNGISPDYITYSTLLRAYIGGYL 216
G++PNL TYN ++ A + +AK ++EM+RNG+ PD IT+++LL G L
Sbjct: 296 EYGLRPNLVTYNAVIDACGKGGMEFKQVAKF-FDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 217 REDALGIYREMKENRIGVTVDLCNLLL-SMC----------------------------- 246
E A ++ EM RI V N LL ++C
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 247 -----ADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIES 301
A G DEA+ +F +++ GI D ++++L+++Y+ + EA +L EM
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGI-ALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 302 GFKPNIFVITPLVKCYG 318
G K ++ L+ YG
Sbjct: 474 GIKKDVVTYNALLGGYG 490
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 126/530 (23%), Positives = 222/530 (41%), Gaps = 41/530 (7%)
Query: 17 KIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSM 76
K +P + Y + + K F KL DEM++ KP+ VT+ +I+ +
Sbjct: 350 KRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANY 409
Query: 77 SDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSA 136
A+ F +M GCEPD VT T+I +A+ +D+A +Y R + DT T+S
Sbjct: 410 LKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSV 469
Query: 137 LIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNG 196
+I G ++ +M G PNL T+N ++ +AR A +Y +M+ G
Sbjct: 470 IINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAG 529
Query: 197 ISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAV 256
PD +TYS ++ E+A G++ EM+ + LL+ + G +D+A
Sbjct: 530 FQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAW 589
Query: 257 EIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKC 316
+ ++ + +G+ +P+ T +SL++ + ++SEA +L M+ G P++ T L+ C
Sbjct: 590 QWYQAMLQAGL-RPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSC 648
Query: 317 YGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPMEELGKLIDCIEKANEELGS 376
D G C L+ + L K+ +
Sbjct: 649 ----------CTDARSNFDMGF------CGQLMAVSGHPAHMFLLKMPPAGPDGQKVRDH 692
Query: 377 VVRYLVEGQEEGDQDFIKETSALLNSTDAEIKKPLCNCLIDLCVYLNLPNRARELFDLGS 436
V +L DF ++S D E K+ L + ++D L A ++++ +
Sbjct: 693 VSNFL---------DF-------MHSEDRESKRGLMDAVVDFLHKSGLKEEAGSVWEVAA 736
Query: 437 TLEIYKD-VQFRAPTQWSLHLRRLSVGAAMTALH---VWINDLCKALESGEELPSLGINT 492
+Y D ++ ++ + W ++L +S G A+ AL W + L SG+ + I T
Sbjct: 737 GKNVYPDALREKSYSYWLINLHVMSEGTAVIALSRTLAWFRK--QMLVSGDCPSRIDIVT 794
Query: 493 GIGKYQ--FSDKGLASVFESHLKKLKAPFHEAPDKPGWFFISKKAAKSWL 540
G G+ + E L PF G F S + K+WL
Sbjct: 795 GWGRRSRVTGTSMVRQAVEELLNIFNFPFFTENGNSGCFVGSGEPLKNWL 844
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 71/179 (39%), Gaps = 38/179 (21%)
Query: 2 ENSETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDN 61
N ETA L+ RD + V Y++ M+V C E AE +F EM ++ PD
Sbjct: 513 RNYETA---LKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDE 569
Query: 62 VTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDR 121
+ +++ D+A +W++ M G P+ TC +++
Sbjct: 570 PVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLL------------------ 611
Query: 122 AKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRAR 180
S ++++ M E Y N+ M LG+ P+L TY LL AR
Sbjct: 612 -------------STFLRVHRMSEAY----NLLQSMLALGLHPSLQTYTLLLSCCTDAR 653
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/519 (23%), Positives = 225/519 (43%), Gaps = 43/519 (8%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
Y + + K F KL DEM++ +P+ VT+ +I+ + + A+ F +M
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
GC+PD VT T+I +A+ +D+A +Y R + DT T+S +I G
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
++ +M G PNL TYN ++ +AR A +Y +M+ G PD +TYS ++
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 209 RAYIG--GYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSG 266
+G GYL E+A ++ EM++ + LL+ + G +++A + ++ + +G
Sbjct: 547 EV-LGHCGYL-EEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 604
Query: 267 IYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXX 326
+ +P+ T +SL++ + K++EA +L M+ G +P++ T L+ C
Sbjct: 605 L-RPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSC---------- 653
Query: 327 XXXXXRGLDWGIVPDGHCCCCLLNIMTKTPMEELGKLIDCIEKANEELGSVVRYLVEGQE 386
LD G C L T P +++ G +
Sbjct: 654 CTDGRSKLDMGF-------CGQLMASTGHPAHMF----------------LLKMPAAGPD 690
Query: 387 -EGDQDFIKETSALLNSTDAEIKKPLCNCLIDLCVYLNLPNRARELFDLGSTLEIYKD-V 444
E ++ L++S D E K+ L + ++D A ++++ + ++ D +
Sbjct: 691 GENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDAL 750
Query: 445 QFRAPTQWSLHLRRLSVGAAMTALHVWINDLCKALESGEELPS-LGINTGIGKYQ--FSD 501
+ ++ + W ++L +S G A+TAL + K + + PS + I TG G+
Sbjct: 751 REKSCSYWLINLHVMSEGTAVTALSRTLAWFRKQMLASGTCPSRIDIVTGWGRRSRVTGT 810
Query: 502 KGLASVFESHLKKLKAPFHEAPDKPGWFFISKKAAKSWL 540
+ E L +PF G F S + WL
Sbjct: 811 SMVRQAVEELLNIFGSPFFTESGNSGCFVGSGEPLNRWL 849
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 124/267 (46%), Gaps = 5/267 (1%)
Query: 14 LRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARL 73
+RD +P V YN + + + A +F++M + KPD VT+ T+I+
Sbjct: 391 VRDGCQPN----TVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAK 446
Query: 74 CSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVT 133
D A++ +++M G PD T + +I + ++ A +L+ + + VT
Sbjct: 447 AGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVT 506
Query: 134 FSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMK 193
++ ++ ++ +Y L +Y DM+ G +P+ TY+ ++ + A+ ++ EM+
Sbjct: 507 YNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQ 566
Query: 194 RNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLD 253
+ PD Y L+ + E A Y+ M + V CN LLS V +
Sbjct: 567 QKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIA 626
Query: 254 EAVEIFEDIKSSGIYQPDESTFSSLIT 280
EA E+ +++ + G+ +P T++ L++
Sbjct: 627 EAYELLQNMLALGL-RPSLQTYTLLLS 652
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 91/236 (38%), Gaps = 39/236 (16%)
Query: 19 KPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINC-------- 70
KP R V Y + + K + A ++ M L PD T++ +INC
Sbjct: 431 KPDR----VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 71 ---ARLCSMSDR------------------------AVEWFEKMPGFGCEPDAVTCATVI 103
C M D+ A++ + M G EPD VT + V+
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 104 FAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVK 163
++ AE ++ + +NW D + L+ ++G + ++ Y M G++
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 164 PNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLRED 219
PN+ T N+LL R K A + + M G+ P TY+ LL G + D
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLD 662
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 68/174 (39%), Gaps = 35/174 (20%)
Query: 10 VLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMIN 69
L+ RD + V Y++ M+V C E AE +F EM Q+ PD + +++
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Query: 70 CARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRL 129
++A +W++ M G P+ TC +++ + RV + A
Sbjct: 583 LWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEA-------------- 628
Query: 130 DTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPL 183
Y +L+ +M LG++P+L TY LL R L
Sbjct: 629 -----------YELLQ----------NMLALGLRPSLQTYTLLLSCCTDGRSKL 661
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/519 (23%), Positives = 225/519 (43%), Gaps = 43/519 (8%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
Y + + K F KL DEM++ +P+ VT+ +I+ + + A+ F +M
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
GC+PD VT T+I +A+ +D+A +Y R + DT T+S +I G
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
++ +M G PNL TYN ++ +AR A +Y +M+ G PD +TYS ++
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 209 RAYIG--GYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSG 266
+G GYL E+A ++ EM++ + LL+ + G +++A + ++ + +G
Sbjct: 547 EV-LGHCGYL-EEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 604
Query: 267 IYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXX 326
+ +P+ T +SL++ + K++EA +L M+ G +P++ T L+ C
Sbjct: 605 L-RPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSC---------- 653
Query: 327 XXXXXRGLDWGIVPDGHCCCCLLNIMTKTPMEELGKLIDCIEKANEELGSVVRYLVEGQE 386
LD G C L T P +++ G +
Sbjct: 654 CTDGRSKLDMGF-------CGQLMASTGHPAHMF----------------LLKMPAAGPD 690
Query: 387 -EGDQDFIKETSALLNSTDAEIKKPLCNCLIDLCVYLNLPNRARELFDLGSTLEIYKD-V 444
E ++ L++S D E K+ L + ++D A ++++ + ++ D +
Sbjct: 691 GENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDAL 750
Query: 445 QFRAPTQWSLHLRRLSVGAAMTALHVWINDLCKALESGEELPS-LGINTGIGKYQ--FSD 501
+ ++ + W ++L +S G A+TAL + K + + PS + I TG G+
Sbjct: 751 REKSCSYWLINLHVMSEGTAVTALSRTLAWFRKQMLASGTCPSRIDIVTGWGRRSRVTGT 810
Query: 502 KGLASVFESHLKKLKAPFHEAPDKPGWFFISKKAAKSWL 540
+ E L +PF G F S + WL
Sbjct: 811 SMVRQAVEELLNIFGSPFFTESGNSGCFVGSGEPLNRWL 849
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 124/267 (46%), Gaps = 5/267 (1%)
Query: 14 LRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARL 73
+RD +P V YN + + + A +F++M + KPD VT+ T+I+
Sbjct: 391 VRDGCQPN----TVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAK 446
Query: 74 CSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVT 133
D A++ +++M G PD T + +I + ++ A +L+ + + VT
Sbjct: 447 AGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVT 506
Query: 134 FSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMK 193
++ ++ ++ +Y L +Y DM+ G +P+ TY+ ++ + A+ ++ EM+
Sbjct: 507 YNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQ 566
Query: 194 RNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLD 253
+ PD Y L+ + E A Y+ M + V CN LLS V +
Sbjct: 567 QKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIA 626
Query: 254 EAVEIFEDIKSSGIYQPDESTFSSLIT 280
EA E+ +++ + G+ +P T++ L++
Sbjct: 627 EAYELLQNMLALGL-RPSLQTYTLLLS 652
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
LV YN+ M + K ++++ A KL+ +M +PD VT++ ++ C + A F
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
+M PD ++ + + NV+ A + Y R + T ++L+ + +
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVN 623
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPL 183
+ + +M LG++P+L TY LL R L
Sbjct: 624 KIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKL 661
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/519 (23%), Positives = 225/519 (43%), Gaps = 43/519 (8%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
Y + + K F KL DEM++ +P+ VT+ +I+ + + A+ F +M
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
GC+PD VT T+I +A+ +D+A +Y R + DT T+S +I G
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
++ +M G PNL TYN ++ +AR A +Y +M+ G PD +TYS ++
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 209 RAYIG--GYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSG 266
+G GYL E+A ++ EM++ + LL+ + G +++A + ++ + +G
Sbjct: 547 EV-LGHCGYL-EEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 604
Query: 267 IYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXX 326
+ +P+ T +SL++ + K++EA +L M+ G +P++ T L+ C
Sbjct: 605 L-RPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSC---------- 653
Query: 327 XXXXXRGLDWGIVPDGHCCCCLLNIMTKTPMEELGKLIDCIEKANEELGSVVRYLVEGQE 386
LD G C L T P +++ G +
Sbjct: 654 CTDGRSKLDMGF-------CGQLMASTGHPAHMF----------------LLKMPAAGPD 690
Query: 387 -EGDQDFIKETSALLNSTDAEIKKPLCNCLIDLCVYLNLPNRARELFDLGSTLEIYKD-V 444
E ++ L++S D E K+ L + ++D A ++++ + ++ D +
Sbjct: 691 GENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDAL 750
Query: 445 QFRAPTQWSLHLRRLSVGAAMTALHVWINDLCKALESGEELPS-LGINTGIGKYQ--FSD 501
+ ++ + W ++L +S G A+TAL + K + + PS + I TG G+
Sbjct: 751 REKSCSYWLINLHVMSEGTAVTALSRTLAWFRKQMLASGTCPSRIDIVTGWGRRSRVTGT 810
Query: 502 KGLASVFESHLKKLKAPFHEAPDKPGWFFISKKAAKSWL 540
+ E L +PF G F S + WL
Sbjct: 811 SMVRQAVEELLNIFGSPFFTESGNSGCFVGSGEPLNRWL 849
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 124/267 (46%), Gaps = 5/267 (1%)
Query: 14 LRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARL 73
+RD +P V YN + + + A +F++M + KPD VT+ T+I+
Sbjct: 391 VRDGCQPN----TVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAK 446
Query: 74 CSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVT 133
D A++ +++M G PD T + +I + ++ A +L+ + + VT
Sbjct: 447 AGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVT 506
Query: 134 FSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMK 193
++ ++ ++ +Y L +Y DM+ G +P+ TY+ ++ + A+ ++ EM+
Sbjct: 507 YNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQ 566
Query: 194 RNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLD 253
+ PD Y L+ + E A Y+ M + V CN LLS V +
Sbjct: 567 QKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIA 626
Query: 254 EAVEIFEDIKSSGIYQPDESTFSSLIT 280
EA E+ +++ + G+ +P T++ L++
Sbjct: 627 EAYELLQNMLALGL-RPSLQTYTLLLS 652
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
LV YN+ M + K ++++ A KL+ +M +PD VT++ ++ C + A F
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
+M PD ++ + + NV+ A + Y R + T ++L+ + +
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVN 623
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPL 183
+ + +M LG++P+L TY LL R L
Sbjct: 624 KIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKL 661
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 154/297 (51%), Gaps = 12/297 (4%)
Query: 17 KIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCS- 75
+ +PT G + +YN M V+ + F A++L D M QR PD ++F T+IN ARL S
Sbjct: 216 RAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLIN-ARLKSG 274
Query: 76 --MSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVT 133
+ AVE + + G PDA+T T++ A +R N+D A ++++ + + D T
Sbjct: 275 GLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWT 334
Query: 134 FSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMK 193
++A+I +YG + ++ ++++ G P+ TYN+LL A R R K +Y++M+
Sbjct: 335 YNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQ 394
Query: 194 RNGISPDYITYSTLLRAYIGGYLREDALGIYREMK----ENRIGVTVDLCNLLLSMCADV 249
+ G D +TY+T++ Y + AL +Y++MK N +T +L+
Sbjct: 395 KMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITY---TVLIDSLGKA 451
Query: 250 GFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
EA + ++ GI +P T+S+LI Y+ K EAE + M+ SG KP+
Sbjct: 452 NRTVEAAALMSEMLDVGI-KPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPD 507
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 124/564 (21%), Positives = 238/564 (42%), Gaps = 55/564 (9%)
Query: 22 RGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAV 81
R +L +N M + +C +E A +F+ M++ P + +++ LC + R
Sbjct: 783 RTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHA--LC-VDGRLE 839
Query: 82 EWF---EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTE------------- 125
E + E++ G + + ++ A+AR N+ +++Y K
Sbjct: 840 ELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMI 899
Query: 126 ----------------------NWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVK 163
N++++ +++++KMY +EDY + + VY +K G++
Sbjct: 900 ELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLE 959
Query: 164 PNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGI 223
P+ TYNTL+ R R+P L+ ++M+ G+ P TY +L+ A+ E A +
Sbjct: 960 PDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQL 1019
Query: 224 YREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYS 283
+ E+ + + + ++ + D G +A ++ + +K++GI +P +T L+ YS
Sbjct: 1020 FEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGI-EPTLATMHLLMVSYS 1078
Query: 284 CFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGH 343
EAE +L+ + ++ + + ++ Y G+ PD
Sbjct: 1079 SSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHR 1138
Query: 344 CCCCLLNI--MTKTPMEELGKLIDCIEKANEELG-SVVRYLVEGQEEGDQDFIKETSALL 400
C + +K +E + + KA E++G + L+ G+ E + L
Sbjct: 1139 IWTCFVRAASFSKEKIE-----VMLLLKALEDIGFDLPIRLLAGRPELLVSEVDGWFEKL 1193
Query: 401 NSTDAEIKKPLCNCLIDLCVYLNLPNRARELFDLGSTLEIYKDVQFR-APTQWSLHLRRL 459
S + N L++L L A +F LG I+ FR A W RRL
Sbjct: 1194 KSIEDNAALNFVNALLNLLWAFELRATASWVFQLGIKRGIFSLDVFRVADKDWGADFRRL 1253
Query: 460 SVGAAMTALHVWINDLCKA-LESGEELP-SLGINTGIGKYQFSDKGLASVFESHLKKLKA 517
S GAA+ AL +W++ + A LE E P S+ + TG +Y + L ++ L ++ +
Sbjct: 1254 SGGAALVALTLWLDHMQDASLEGYPESPKSVVLITGTAEY--NGISLDKTLKACLWEMGS 1311
Query: 518 PFHEAPDKPGWFFISKKAAKSWLK 541
PF + G + + WLK
Sbjct: 1312 PFLPCKTRTGLLVAKAHSLRMWLK 1335
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 5/224 (2%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEK 86
+ YN + + + +GA K+F++M + +PD T+ MI+ C ++ A F +
Sbjct: 298 ITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFME 357
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED 146
+ G PDAVT ++++A+AR N + + +Y + + + D +T++ +I MYG
Sbjct: 358 LELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQ 417
Query: 147 YDQCLNVYDDMKVL-GVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
D L +Y DMK L G P+ TY L+ ++ +A + + A + EM GI P TYS
Sbjct: 418 LDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYS 477
Query: 206 TLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADV 249
L+ Y RE+A + M R G D NL S+ DV
Sbjct: 478 ALICGYAKAGKREEAEDTFSCML--RSGTKPD--NLAYSVMLDV 517
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 134/283 (47%), Gaps = 4/283 (1%)
Query: 61 NVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYD 120
+ + T+++C A + F + GCE C +++ Y ++ + A ++ +
Sbjct: 681 STMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVN 740
Query: 121 RAKTENWRLD-TVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRA 179
+A+T+ + + ++ +I+ YG + + + +V +++ G P+L T+N+L+ A +
Sbjct: 741 QAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQC 800
Query: 180 RKPLLAKLIYEEMKRNGISPDYITYSTLLRAY-IGGYLREDALGIYREMKENRIGVTVDL 238
A+ I+ M R+G SP + + LL A + G L E+ + E+++ ++
Sbjct: 801 GCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRL-EELYVVVEELQDMGFKISKSS 859
Query: 239 CNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEM 298
L+L A G + E +I+ +K++G Y P + +I + +V +AE M++EM
Sbjct: 860 ILLMLDAFARAGNIFEVKKIYSSMKAAG-YLPTIRLYRMMIELLCKGKRVRDAEIMVSEM 918
Query: 299 IESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPD 341
E+ FK + + ++K Y R + G+ PD
Sbjct: 919 EEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPD 961
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 92/202 (45%), Gaps = 14/202 (6%)
Query: 9 VVLRYLRDKIKPTRG-------------KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQR 55
+++ Y RD+ +P G +L Y + F K K E AE+LF+E+L +
Sbjct: 968 LIIMYCRDR-RPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSK 1026
Query: 56 KLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMA 115
LK D + TM+ +R +A + + M G EP T ++ +Y+ N A
Sbjct: 1027 GLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEA 1086
Query: 116 ERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPA 175
E++ K L T+ +S++I Y +DY+ + +MK G++P+ + + A
Sbjct: 1087 EKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRA 1146
Query: 176 VYRARKPLLAKLIYEEMKRNGI 197
+++ + L+ + ++ G
Sbjct: 1147 ASFSKEKIEVMLLLKALEDIGF 1168
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 122/290 (42%), Gaps = 8/290 (2%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEK 86
V YN + F + ++ E ++++ +M + D +T+ T+I+ D A++ ++
Sbjct: 368 VTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKD 427
Query: 87 MPGF-GCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
M G G PDA+T +I + + A L + T+SALI Y
Sbjct: 428 MKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAG 487
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
++ + + M G KP+ Y+ +L + R + A +Y +M +G +P Y Y
Sbjct: 488 KREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYE 547
Query: 206 TLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLL-SMCADVGFLDEAVEIFEDIKS 264
++ + +D R+M+E +++ ++L+ C D+ V I
Sbjct: 548 LMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVAI------ 601
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
+ Y+ + T S++ YS + SEA +L + E + L+
Sbjct: 602 TNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALI 651
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 148/326 (45%), Gaps = 36/326 (11%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
YNV ++ + K F+ A LFDEM QR L PD T++T+I M D A+ W +KM
Sbjct: 158 YNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKM- 216
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
E D V+ D V +S LI++ L DY
Sbjct: 217 ----EQDRVSG------------------------------DLVLYSNLIELSRRLCDYS 242
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+ ++++ +K G+ P+L YN+++ +A+ A+L+ +EM G+ P+ ++YSTLL
Sbjct: 243 KAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLL 302
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIY 268
Y+ + +AL ++ EMKE + + CN+++ + + + EA +F ++ I
Sbjct: 303 SVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDI- 361
Query: 269 QPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXX 328
+P+ ++++++ VY EA + M + N+ ++K YG
Sbjct: 362 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATN 421
Query: 329 XXXRGLDWGIVPDGHCCCCLLNIMTK 354
GI P+ +++I K
Sbjct: 422 LVQEMQSRGIEPNAITYSTIISIWGK 447
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 161/347 (46%), Gaps = 11/347 (3%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+LVLY+ +++ ++ D+ A +F + + + PD V + +MIN + A
Sbjct: 224 DLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLI 283
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERL--YDRAKTENWRLDTVTFSALIKMYG 142
++M G P+ V+ +T++ Y VEN E L + K N LD T + +I +YG
Sbjct: 284 KEMNEAGVLPNTVSYSTLLSVY--VENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYG 341
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
L+ + ++ ++ + ++PN+ +YNT+L A A ++ M+R I + +
Sbjct: 342 QLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVV 401
Query: 203 TYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDI 262
TY+T+++ Y E A + +EM+ I + ++S+ G LD A +F+ +
Sbjct: 402 TYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKL 461
Query: 263 KSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXX 322
+SSG+ + D+ + ++I Y + A+ +L+E+ P IT L K
Sbjct: 462 RSSGV-EIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKA----GR 516
Query: 323 XXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPMEELGKLIDCIEK 369
+ + G V D C++N+ ++ + +I+ EK
Sbjct: 517 TEEATWVFRQAFESGEVKDISVFGCMINLYSRN--QRYVNVIEVFEK 561
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 157/352 (44%), Gaps = 48/352 (13%)
Query: 4 SETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVT 63
S+ + R R I P +LV YN + V+ K K F A L EM + + P+ V+
Sbjct: 242 SKAISIFSRLKRSGITP----DLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVS 297
Query: 64 FATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAK 123
++T+++ A+ F +M C D TC +I Y +++ V A+RL+ +
Sbjct: 298 YSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLR 357
Query: 124 TEN---------------------------WRL--------DTVTFSALIKMYGMLEDYD 148
+ +RL + VT++ +IK+YG +++
Sbjct: 358 KMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHE 417
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+ N+ +M+ G++PN TY+T++ +A K A ++++++ +G+ D + Y T++
Sbjct: 418 KATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMI 477
Query: 209 RAYIGGYLREDALGIYREMK--ENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSG 266
AY L A + E+K +N T +++ A G +EA +F SG
Sbjct: 478 VAYERVGLMGHAKRLLHELKLPDNIPRETA------ITILAKAGRTEEATWVFRQAFESG 531
Query: 267 IYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
+ D S F +I +YS + + +M +G+ P+ VI ++ YG
Sbjct: 532 EVK-DISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYG 582
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 110/491 (22%), Positives = 213/491 (43%), Gaps = 11/491 (2%)
Query: 5 ETAPVVLRYLRDK-IKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVT 63
+ A +V R + D I P +L Y+ ++ F K + E L EM PD +
Sbjct: 264 DEAEMVFRTMNDGGIVP----DLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITS 319
Query: 64 FATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAK 123
+ ++ A+ F +M GC P+A T + ++ + + D +L+ K
Sbjct: 320 YNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMK 379
Query: 124 TENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPL 183
+ N D T++ LI+++G + + + ++ DM ++P++ TY ++ A +
Sbjct: 380 SSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHE 439
Query: 184 LAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLL 243
A+ I + M N I P Y+ ++ A+ L E+AL + M E +++ + LL
Sbjct: 440 DARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLL 499
Query: 244 SMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGF 303
A G + E+ I + SGI + + TF++ I Y K EA +M +S
Sbjct: 500 YSFARGGLVKESEAILSRLVDSGIPR-NRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRC 558
Query: 304 KPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPM-EELGK 362
P+ + ++ Y I+P C C +L + KT +++ +
Sbjct: 559 DPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNE 618
Query: 363 LI-DCIEKANEELGSVVRYLVEGQEEGDQDF--IKETSALLNSTDAEIKKPLCNCLIDLC 419
L+ + + + V+ +++G + D ++ ++ LNS + N L+D
Sbjct: 619 LLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDAL 678
Query: 420 VYLNLPNRARELFDLGSTLEIYKDVQFRAPTQWSLHLRRLSVGAAMTALHVWINDLCKAL 479
+L RA + + + ++ ++ + WS+ + R+S G TAL VW+ND+ L
Sbjct: 679 WWLGQKERAARVLNEATKRGLFPELFRKNKLVWSVDVHRMSEGGMYTALSVWLNDINDML 738
Query: 480 ESGEELPSLGI 490
G +LP L +
Sbjct: 739 LKG-DLPQLAV 748
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 141/296 (47%), Gaps = 11/296 (3%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKL--KPDNVTFATMINCARLCSMSDRAVEWFEK 86
+ + K F D++ + +LF M QR++ KP+ + MI+ + D+ +E F++
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYM-QRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDE 166
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIK--MYGML 144
MP G + +I AY R + + L DR K E +T++ +I G L
Sbjct: 167 MPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGL 226
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
D++ L ++ +M+ G++P++ TYNTLL A A++++ M GI PD TY
Sbjct: 227 -DWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTY 285
Query: 205 STLLRAYIGGYLR--EDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDI 262
S L+ + G LR E + EM + N+LL A G + EA+ +F +
Sbjct: 286 SHLVETF--GKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 343
Query: 263 KSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
+++G P+ +T+S L+ ++ + + + EM S P+ L++ +G
Sbjct: 344 QAAGC-TPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFG 398
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 143/329 (43%), Gaps = 8/329 (2%)
Query: 12 RYLRDKIKPTRGKELVLYNVAMKVFKKCK-DFEGAEKLFDEMLQRKLKPDNVTFATMINC 70
R +KI P+ ++ YN + + D+EG LF EM ++PD VT+ T+++
Sbjct: 201 RMKNEKISPS----ILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSA 256
Query: 71 ARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLD 130
+ + D A F M G PD T + ++ + ++ ++ L + D
Sbjct: 257 CAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPD 316
Query: 131 TVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYE 190
+++ L++ Y + + V+ M+ G PN TY+ LL ++ + + ++
Sbjct: 317 ITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFL 376
Query: 191 EMKRNGISPDYITYSTLLRAYI-GGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADV 249
EMK + PD TY+ L+ + GGY +E + ++ +M E I ++ ++ C
Sbjct: 377 EMKSSNTDPDAATYNILIEVFGEGGYFKE-VVTLFHDMVEENIEPDMETYEGIIFACGKG 435
Query: 250 GFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFV 309
G ++A +I + + ++ I P ++ +I + A EA N M E G P+I
Sbjct: 436 GLHEDARKILQYMTANDIV-PSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIET 494
Query: 310 ITPLVKCYGXXXXXXXXXXXXXRGLDWGI 338
L+ + R +D GI
Sbjct: 495 FHSLLYSFARGGLVKESEAILSRLVDSGI 523
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 112/241 (46%), Gaps = 3/241 (1%)
Query: 117 RLYDRAKTENW-RLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPA 175
RL+ + + W + + ++ +I + G D+CL V+D+M GV ++ +Y L+ A
Sbjct: 126 RLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINA 185
Query: 176 VYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYI-GGYLREDALGIYREMKENRIGV 234
R + + + + MK ISP +TY+T++ A GG E LG++ EM+ I
Sbjct: 186 YGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQP 245
Query: 235 TVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAM 294
+ N LLS CA G DEA +F + GI PD +T+S L+ + ++ + +
Sbjct: 246 DIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIV-PDLTTYSHLVETFGKLRRLEKVCDL 304
Query: 295 LNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTK 354
L EM G P+I L++ Y + G P+ + LLN+ +
Sbjct: 305 LGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQ 364
Query: 355 T 355
+
Sbjct: 365 S 365
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 142/294 (48%), Gaps = 3/294 (1%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
L+ Y + + K F L ++ + LKPD + F +IN + D+A++ FE
Sbjct: 354 LITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFE 413
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRA-KTENWRLDTVTFSALIKMYGML 144
KM GC+P A T T+I Y ++ ++ + RL D + E + + T + L++ +
Sbjct: 414 KMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQ 473
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAK-LIYEEMKRNGISPDYIT 203
++ N+ M+ GVKP++ T+NTL A R A+ +I M N + P+ T
Sbjct: 474 RKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRT 533
Query: 204 YSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIK 263
T++ Y E+AL + MKE + + + N L+ ++ +D E+ + ++
Sbjct: 534 CGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLME 593
Query: 264 SSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
G+ +PD TFS+L+ +S + E + +M+E G P+I + L K Y
Sbjct: 594 EFGV-KPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGY 646
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 141/307 (45%), Gaps = 5/307 (1%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIF 104
A +F+ +++ KP +T+ T++ + K+ G +PD + +I
Sbjct: 338 AHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIIN 397
Query: 105 AYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDM-KVLGVK 163
A + N+D A +++++ K + TF+ LIK YG + ++ + D M + ++
Sbjct: 398 ASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQ 457
Query: 164 PNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAY--IGGYLREDAL 221
PN T N L+ A RK A I +M+ G+ PD +T++TL +AY IG + +
Sbjct: 458 PNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDM 517
Query: 222 GIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITV 281
I R M N++ V C +++ + G ++EA+ F +K G++ P+ F+SLI
Sbjct: 518 IIPR-MLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVH-PNLFVFNSLIKG 575
Query: 282 YSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPD 341
+ + +++ M E G KP++ + L+ + L+ GI PD
Sbjct: 576 FLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPD 635
Query: 342 GHCCCCL 348
H L
Sbjct: 636 IHAFSIL 642
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 137/340 (40%), Gaps = 77/340 (22%)
Query: 15 RDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMIN----- 69
++ +KP + +L+N + + + + A K+F++M + KP TF T+I
Sbjct: 382 KNGLKP----DTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 70 -----CARLCSM----------------------SDRAVE--W--FEKMPGFGCEPDAVT 98
+RL M + R +E W KM +G +PD VT
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 99 CATVIFAYARVENVDMAERL-YDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDM 157
T+ AYAR+ + AE + R + + T ++ Y ++ L + M
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557
Query: 158 KVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLR 217
K LGV PNL +N+L+ + + M+ G+ PD +T+STL+ A+
Sbjct: 558 KELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAW------ 611
Query: 218 EDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSS 277
+ VG + EI+ D+ GI PD FS
Sbjct: 612 -----------------------------SSVGDMKRCEEIYTDMLEGGI-DPDIHAFSI 641
Query: 278 LITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
L Y+ + +AE +LN+M + G +PN+ + T ++ +
Sbjct: 642 LAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGW 681
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 101/211 (47%), Gaps = 5/211 (2%)
Query: 18 IKPTRGKELVLYNVAMKVFKKCKDFEGAEKLF-DEMLQRKLKPDNVTFATMINCARLCSM 76
+KP ++V +N K + + AE + ML K+KP+ T T++N
Sbjct: 491 VKP----DVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGK 546
Query: 77 SDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSA 136
+ A+ +F +M G P+ ++I + + ++D + D + + D VTFS
Sbjct: 547 MEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFST 606
Query: 137 LIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNG 196
L+ + + D +C +Y DM G+ P++ ++ L RA +P A+ I +M++ G
Sbjct: 607 LMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFG 666
Query: 197 ISPDYITYSTLLRAYIGGYLREDALGIYREM 227
+ P+ + Y+ ++ + + A+ +Y++M
Sbjct: 667 VRPNVVIYTQIISGWCSAGEMKKAMQVYKKM 697
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 87/175 (49%), Gaps = 1/175 (0%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
L ++N +K F D +G ++ D M + +KPD VTF+T++N R E +
Sbjct: 566 LFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYT 625
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
M G +PD + + YAR + AE++ ++ + R + V ++ +I +
Sbjct: 626 DMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAG 685
Query: 146 DYDQCLNVYDDM-KVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISP 199
+ + + VY M ++G+ PNL TY TL+ A++P A+ + ++M+ + P
Sbjct: 686 EMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVP 740
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 2/171 (1%)
Query: 172 LLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENR 231
L+ + +P A I+ + G P ITY+TL+ A L + ++++N
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 232 IGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEA 291
+ L N +++ ++ G LD+A++IFE +K SG +P STF++LI Y K+ E+
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGC-KPTASTFNTLIKGYGKIGKLEES 443
Query: 292 EAMLNEMI-ESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPD 341
+L+ M+ + +PN LV+ + + +G+ PD
Sbjct: 444 SRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPD 494
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 145/306 (47%), Gaps = 10/306 (3%)
Query: 5 ETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKC-KDFEGAEKLFDEMLQRKLKPDNVT 63
E V + D KPT L+ YNV + VF K + L ++M + PD T
Sbjct: 226 EAVNVFKKMEEDGCKPT----LITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYT 281
Query: 64 FATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAK 123
+ T+I C + S+ A + FE+M G D VT ++ Y + A ++ +
Sbjct: 282 YNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMV 341
Query: 124 TENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPL 183
+ VT+++LI Y D+ + + + M G KP++ TY TLL RA K
Sbjct: 342 LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVE 401
Query: 184 LAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLC--NL 241
A I+EEM+ G P+ T++ ++ Y + + I+ E+ N G++ D+ N
Sbjct: 402 SAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI--NVCGLSPDIVTWNT 459
Query: 242 LLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIES 301
LL++ G E +F+++K +G + P+ TF++LI+ YS +A + M+++
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAG-FVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA 518
Query: 302 GFKPNI 307
G P++
Sbjct: 519 GVTPDL 524
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 150/331 (45%), Gaps = 44/331 (13%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEK 86
V YN + V+ K + A K+ +EM+ P VT+ ++I+ M D A+E +
Sbjct: 315 VTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQ 374
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED 146
M G +PD T T++ + R V+ A +++ + + + TF+A IKMYG
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 147 YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNG---------- 196
+ + + ++D++ V G+ P++ T+NTLL + +++EMKR G
Sbjct: 435 FTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNT 494
Query: 197 -------------------------ISPDYITYSTLLRAYIGGYLREDALGIYREMKENR 231
++PD TY+T+L A G + E + + EM++ R
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR 554
Query: 232 IGVT-VDLCNLLLSMC--ADVGFLDE-AVEIFEDIKSSGIYQPDESTFSSLITVYSCFAK 287
+ C+LL + ++G + A E++ SG+ +P +L+ V S
Sbjct: 555 CKPNELTYCSLLHAYANGKEIGLMHSLAEEVY-----SGVIEPRAVLLKTLVLVCSKCDL 609
Query: 288 VSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
+ EAE +E+ E GF P+I + +V YG
Sbjct: 610 LPEAERAFSELKERGFSPDITTLNSMVSIYG 640
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 119/241 (49%), Gaps = 4/241 (1%)
Query: 79 RAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALI 138
RA +WF K + D A +I + V A +++ + + + LD ++++LI
Sbjct: 156 RAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLI 215
Query: 139 KMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPL--LAKLIYEEMKRNG 196
+ Y + +NV+ M+ G KP L TYN +L + P + L+ E+MK +G
Sbjct: 216 SAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLV-EKMKSDG 274
Query: 197 ISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAV 256
I+PD TY+TL+ G L ++A ++ EMK N LL + EA+
Sbjct: 275 IAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAM 334
Query: 257 EIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKC 316
++ ++ +G + P T++SLI+ Y+ + EA + N+M E G KP++F T L+
Sbjct: 335 KVLNEMVLNG-FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG 393
Query: 317 Y 317
+
Sbjct: 394 F 394
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 136/283 (48%), Gaps = 5/283 (1%)
Query: 40 KDFEGAEKLFDEMLQRKLKP---DNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDA 96
K F+ A + FD +++K DN A +I+ A F + G D
Sbjct: 149 KKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDV 208
Query: 97 VTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG-MLEDYDQCLNVYD 155
+ ++I A+A A ++ + + + + +T++ ++ ++G M +++ ++ +
Sbjct: 209 YSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVE 268
Query: 156 DMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGY 215
MK G+ P+ TYNTL+ R A ++EEMK G S D +TY+ LL Y +
Sbjct: 269 KMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSH 328
Query: 216 LREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTF 275
++A+ + EM N ++ N L+S A G LDEA+E+ + G +PD T+
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGT-KPDVFTY 387
Query: 276 SSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
++L++ + KV A ++ EM +G KPNI +K YG
Sbjct: 388 TTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYG 430
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 143/353 (40%), Gaps = 41/353 (11%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCE----------- 93
A +F+ + + D ++ ++I+ AV F+KM GC+
Sbjct: 192 AANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILN 251
Query: 94 -------------------------PDAVTCATVIFAYARVENVDMAERLYDRAKTENWR 128
PDA T T+I R A ++++ K +
Sbjct: 252 VFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFS 311
Query: 129 LDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLI 188
D VT++AL+ +YG + + V ++M + G P++ TYN+L+ A R A +
Sbjct: 312 YDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMEL 371
Query: 189 YEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLC--NLLLSMC 246
+M G PD TY+TLL + E A+ I+ EM+ G ++C N + M
Sbjct: 372 KNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRN--AGCKPNICTFNAFIKMY 429
Query: 247 ADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
+ G E ++IF++I G+ PD T+++L+ V+ SE + EM +GF P
Sbjct: 430 GNRGKFTEMMKIFDEINVCGL-SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPE 488
Query: 307 IFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPMEE 359
L+ Y R LD G+ PD +L + + M E
Sbjct: 489 RETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWE 541
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 132/317 (41%), Gaps = 44/317 (13%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
+N +K++ F K+FDE+ L PD VT+ T++ M F++M
Sbjct: 422 FNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMK 481
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
G P+ T T+I AY+R + ++
Sbjct: 482 RAGFVPERETFNTLISAYSRCGS-----------------------------------FE 506
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
Q + VY M GV P+L TYNT+L A+ R ++ + EM+ P+ +TY +LL
Sbjct: 507 QAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVD----LCNLLLSMCADVGFLDEAVEIFEDIKS 264
AY G +G+ + E ++ L L+ +C+ L EA F ++K
Sbjct: 567 HAYANG----KEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKE 622
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXX 324
G + PD +T +S++++Y V++A +L+ M E GF P++ L+ +
Sbjct: 623 RG-FSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFG 681
Query: 325 XXXXXXXRGLDWGIVPD 341
L GI PD
Sbjct: 682 KSEEILREILAKGIKPD 698
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 111/238 (46%)
Query: 33 MKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGC 92
+ + K+ L +E+ ++P V T++ C + A F ++ G
Sbjct: 566 LHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF 625
Query: 93 EPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLN 152
PD T +++ Y R + V A + D K + T+++L+ M+ D+ +
Sbjct: 626 SPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEE 685
Query: 153 VYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYI 212
+ ++ G+KP++ +YNT++ A R + A I+ EM+ +GI PD ITY+T + +Y
Sbjct: 686 ILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYA 745
Query: 213 GGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQP 270
+ E+A+G+ R M ++ + N ++ + DEA ED+++ + P
Sbjct: 746 ADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAP 803
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 146/320 (45%), Gaps = 15/320 (4%)
Query: 3 NSETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNV 62
+SE + V R P R +N + + +C FE A ++ ML + PD
Sbjct: 470 DSEVSGVFKEMKRAGFVPERET----FNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLS 525
Query: 63 TFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRA 122
T+ T++ M +++ + +M C+P+ +T +++ AYA + + + L +
Sbjct: 526 TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV 585
Query: 123 KTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKP 182
+ V L+ + + + + ++K G P++ T N+++ ++Y R+
Sbjct: 586 YSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMV-SIY-GRRQ 643
Query: 183 LLAKL--IYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCN 240
++AK + + MK G +P TY++L+ + + I RE+ G+ D+ +
Sbjct: 644 MVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAK--GIKPDIIS 701
Query: 241 ---LLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNE 297
++ + C + D A IF ++++SGI PD T+++ I Y+ + EA ++
Sbjct: 702 YNTVIYAYCRNTRMRD-ASRIFSEMRNSGIV-PDVITYNTFIGSYAADSMFEEAIGVVRY 759
Query: 298 MIESGFKPNIFVITPLVKCY 317
MI+ G +PN +V Y
Sbjct: 760 MIKHGCRPNQNTYNSIVDGY 779
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 144/311 (46%), Gaps = 7/311 (2%)
Query: 10 VLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMIN 69
V R+ +D I + YN+ + K D E A LF+EM R L PD VT+ +MI+
Sbjct: 246 VKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMID 305
Query: 70 CARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRL 129
D V +FE+M CEPD +T +I + + + + Y K +
Sbjct: 306 GFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKP 365
Query: 130 DTVTFSALIKMY---GMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAK 186
+ V++S L+ + GM++ Q + Y DM+ +G+ PN TY +L+ A + A
Sbjct: 366 NVVSYSTLVDAFCKEGMMQ---QAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAF 422
Query: 187 LIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMC 246
+ EM + G+ + +TY+ L+ ++A ++ +M + + N L+
Sbjct: 423 RLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGF 482
Query: 247 ADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
+D A+E+ ++K GI +PD + + I K+ A+ ++NEM E G K N
Sbjct: 483 VKAKNMDRALELLNELKGRGI-KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKAN 541
Query: 307 IFVITPLVKCY 317
+ T L+ Y
Sbjct: 542 SLIYTTLMDAY 552
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 148/310 (47%), Gaps = 6/310 (1%)
Query: 8 PVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATM 67
P+ L + R+ +V Y+ + F K + A K + +M + L P+ T+ ++
Sbjct: 349 PIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSL 408
Query: 68 I--NCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTE 125
I NC ++ ++SD A +M G E + VT +I E + AE L+ + T
Sbjct: 409 IDANC-KIGNLSD-AFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 466
Query: 126 NWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLA 185
+ +++ALI + ++ D+ L + +++K G+KP+L Y T + + K A
Sbjct: 467 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 526
Query: 186 KLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVT-VDLCNLLLS 244
K++ EMK GI + + Y+TL+ AY + L + EMKE I VT V C L+
Sbjct: 527 KVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDG 586
Query: 245 MCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFK 304
+C + + +AV+ F I + Q + + F+++I +V A + +M++ G
Sbjct: 587 LCKN-KLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLV 645
Query: 305 PNIFVITPLV 314
P+ T L+
Sbjct: 646 PDRTAYTSLM 655
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 112/240 (46%), Gaps = 1/240 (0%)
Query: 75 SMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTF 134
M + A++ F KM F P +C ++ +A++ D +R + R T+
Sbjct: 206 GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTY 265
Query: 135 SALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKR 194
+ +I D + ++++MK G+ P+ TYN+++ + + +EEMK
Sbjct: 266 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 325
Query: 195 NGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDE 254
PD ITY+ L+ + L YREMK N + V + L+ G + +
Sbjct: 326 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ 385
Query: 255 AVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
A++ + D++ G+ P+E T++SLI +S+A + NEM++ G + N+ T L+
Sbjct: 386 AIKFYVDMRRVGLV-PNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALI 444
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 137/278 (49%), Gaps = 7/278 (2%)
Query: 43 EGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATV 102
E A + F +M + ++ P + +++ +D +F+ M G G P T +
Sbjct: 209 EEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIM 268
Query: 103 IFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGV 162
I + +V+ A L++ K DTVT++++I +G + D + +++MK +
Sbjct: 269 IDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCC 328
Query: 163 KPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALG 222
+P++ TYN L+ + K + Y EMK NG+ P+ ++YSTL+ A+ + + A+
Sbjct: 329 EPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK 388
Query: 223 IYREMKENRIGVTVD---LCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLI 279
Y +M+ R+G+ + +L+ + C +G L +A + ++ G+ + + T+++LI
Sbjct: 389 FYVDMR--RVGLVPNEYTYTSLIDANCK-IGNLSDAFRLGNEMLQVGV-EWNVVTYTALI 444
Query: 280 TVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
++ EAE + +M +G PN+ L+ +
Sbjct: 445 DGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGF 482
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 96/213 (45%), Gaps = 6/213 (2%)
Query: 1 MENSETAPVVLRYLRD-KIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKP 59
+E E A VV+ +++ IK ++Y M + K + L DEM + ++
Sbjct: 520 LEKIEAAKVVMNEMKECGIKANS----LIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEV 575
Query: 60 DNVTFATMINCARLCSMSDRAVEWFEKMPG-FGCEPDAVTCATVIFAYARVENVDMAERL 118
VTF +I+ + +AV++F ++ FG + +A +I + V+ A L
Sbjct: 576 TVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTL 635
Query: 119 YDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYR 178
+++ + D +++L+ + + L + D M +G+K +L Y +L+ +
Sbjct: 636 FEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSH 695
Query: 179 ARKPLLAKLIYEEMKRNGISPDYITYSTLLRAY 211
+ A+ EEM GI PD + ++L+ +
Sbjct: 696 CNQLQKARSFLEEMIGEGIHPDEVLCISVLKKH 728
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 114/273 (41%), Gaps = 44/273 (16%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMS--DRAVEW 83
L YN + F K K+ + A +L +E+ R +KPD + + T I LCS+ + A
Sbjct: 472 LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI--WGLCSLEKIEAAKVV 529
Query: 84 FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGM 143
+M G + +++ T++ AY + N L D K + + VTF LI
Sbjct: 530 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 589
Query: 144 LEDYDQCLNVYDDMKV-LGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
+ + ++ ++ + G++ N + ++ + + + A ++E+M + G+ PD
Sbjct: 590 NKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRT 649
Query: 203 TYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDL------------CNLLLS------ 244
Y++L+ +AL + +M E IG+ +DL CN L
Sbjct: 650 AYTSLMDGNFKQGNVLEALALRDKMAE--IGMKLDLLAYTSLVWGLSHCNQLQKARSFLE 707
Query: 245 ------------MCADV-------GFLDEAVEI 258
+C V G +DEAVE+
Sbjct: 708 EMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 135/286 (47%), Gaps = 1/286 (0%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
+ + ++V + A ++ M PD VT+ +I+ D A E FEKM
Sbjct: 261 FTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMK 320
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
+PD VT T++ ++ ++D ++ + + + D VTF+ L+ ++
Sbjct: 321 TGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFG 380
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+ + D M+ G+ PNL TYNTL+ + R + A ++ M+ G+ P TY +
Sbjct: 381 EAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFI 440
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIY 268
Y AL + +MK I + CN L A G EA +IF +K G+
Sbjct: 441 DYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLV 500
Query: 269 QPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
PD T++ ++ YS ++ EA +L+EM+E+G +P++ V+ L+
Sbjct: 501 -PDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLI 545
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 146/329 (44%), Gaps = 6/329 (1%)
Query: 16 DKIKPTRGK-ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLC 74
+K+K R K + V Y + F +D + ++ + EM + PD VTF +++ LC
Sbjct: 317 EKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDA--LC 374
Query: 75 SMSD--RAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTV 132
+ A + + M G P+ T T+I RV +D A L+ ++ +
Sbjct: 375 KAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAY 434
Query: 133 TFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEM 192
T+ I YG D L ++ MK G+ PN+ N L ++ +A + AK I+ +
Sbjct: 435 TYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGL 494
Query: 193 KRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFL 252
K G+ PD +TY+ +++ Y ++A+ + EM EN V + N L++ +
Sbjct: 495 KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRV 554
Query: 253 DEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITP 312
DEA ++F +K + +P T+++L+ K+ EA + M++ G PN
Sbjct: 555 DEAWKMFMRMKEMKL-KPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNT 613
Query: 313 LVKCYGXXXXXXXXXXXXXRGLDWGIVPD 341
L C + +D G VPD
Sbjct: 614 LFDCLCKNDEVTLALKMLFKMMDMGCVPD 642
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 134/294 (45%), Gaps = 1/294 (0%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+L YN+ + + E A+ +F ++ PD T+ +++ D E +
Sbjct: 784 KLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELY 843
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLY-DRAKTENWRLDTVTFSALIKMYGM 143
++M CE + +T VI + NVD A LY D ++ T+ LI
Sbjct: 844 KEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSK 903
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYIT 203
+ +++ M G +PN YN L+ +A + A +++ M + G+ PD T
Sbjct: 904 SGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKT 963
Query: 204 YSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIK 263
YS L+ ++ L ++E+KE+ + V NL+++ L+EA+ +F ++K
Sbjct: 964 YSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMK 1023
Query: 264 SSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+S PD T++SLI V EA + NE+ +G +PN+F L++ Y
Sbjct: 1024 TSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGY 1077
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 38/282 (13%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLF-DEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
+ +N+ + K + + A L+ D M R P T+ +I+ A + FE
Sbjct: 856 ITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFE 915
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
M +GC P+ +I + + D A L+ R E R D T+S L+ M+
Sbjct: 916 GMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVG 975
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRN-GISPDYITY 204
D+ L+ + ++K G+ P++ YN ++ + ++ + A +++ EMK + GI+PD TY
Sbjct: 976 RVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTY 1035
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
++L+ LGI G ++EA +I+ +I+
Sbjct: 1036 NSLIL----------NLGI-------------------------AGMVEEAGKIYNEIQR 1060
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
+G+ +P+ TF++LI YS K A A+ M+ GF PN
Sbjct: 1061 AGL-EPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 133/289 (46%), Gaps = 7/289 (2%)
Query: 28 LYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKM 87
LY++A K +D E A+++F + L PD+VT+ M+ C D A++ +M
Sbjct: 475 LYSLA----KAGRDRE-AKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529
Query: 88 PGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDY 147
GCEPD + ++I + + VD A +++ R K + VT++ L+ G
Sbjct: 530 MENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKI 589
Query: 148 DQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTL 207
+ + +++ M G PN T+NTL + + + LA + +M G PD TY+T+
Sbjct: 590 QEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTI 649
Query: 208 LRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGI 267
+ + ++A+ + +MK+ V LC LL + +++A +I + +
Sbjct: 650 IFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGV-VKASLIEDAYKIITNFLYNCA 708
Query: 268 YQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGF-KPNIFVITPLVK 315
QP + LI A + A + ++ +G + ++ P+++
Sbjct: 709 DQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIR 757
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 1/267 (0%)
Query: 48 LFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYA 107
+FD M +R +K D T+ T+ + +A KM FG +A + +I
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLL 199
Query: 108 RVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLG 167
+ A +Y R E +R T+S+L+ G D D + + +M+ LG+KPN+
Sbjct: 200 KSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVY 259
Query: 168 TYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREM 227
T+ + + RA K A I + M G PD +TY+ L+ A + A ++ +M
Sbjct: 260 TFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM 319
Query: 228 KENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAK 287
K R LL +D LD + + +++ G + PD TF+ L+
Sbjct: 320 KTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG-HVPDVVTFTILVDALCKAGN 378
Query: 288 VSEAEAMLNEMIESGFKPNIFVITPLV 314
EA L+ M + G PN+ L+
Sbjct: 379 FGEAFDTLDVMRDQGILPNLHTYNTLI 405
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 88/184 (47%)
Query: 158 KVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLR 217
K LGV+P L TYN L+ + A +A+ ++ ++K G PD TY+ LL AY
Sbjct: 777 KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKI 836
Query: 218 EDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSS 277
++ +Y+EM + N+++S G +D+A++++ D+ S + P T+
Sbjct: 837 DELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGP 896
Query: 278 LITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWG 337
LI S ++ EA+ + M++ G +PN + L+ +G R + G
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 338 IVPD 341
+ PD
Sbjct: 957 VRPD 960
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 128/340 (37%), Gaps = 40/340 (11%)
Query: 38 KCKDFEGAEKLFDEMLQR-KLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDA 96
K + GA LF++ + ++P T+ +I M + A + F ++ GC PD
Sbjct: 761 KHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDV 820
Query: 97 VTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDD 156
T ++ AY + +D LY T +T+T + +I + D L++Y D
Sbjct: 821 ATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYD 880
Query: 157 -MKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGY 215
M P TY L+ + ++ + AK ++E M G P+ Y+ L+ +
Sbjct: 881 LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGF---- 936
Query: 216 LREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTF 275
G D A +F+ + G+ +PD T+
Sbjct: 937 -------------------------------GKAGEADAACALFKRMVKEGV-RPDLKTY 964
Query: 276 SSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXR-GL 334
S L+ +V E E+ ESG P++ ++ G
Sbjct: 965 SVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKT 1024
Query: 335 DWGIVPDGHCCCCL-LNIMTKTPMEELGKLIDCIEKANEE 373
GI PD + L LN+ +EE GK+ + I++A E
Sbjct: 1025 SRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLE 1064
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 127/345 (36%), Gaps = 43/345 (12%)
Query: 35 VFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPG-FGCE 93
V K DF G+ M+++ KPD + + + +D + +F+ + G
Sbjct: 62 VSMKSSDFSGS------MIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLV 115
Query: 94 PDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNV 153
TC ++ A ++ ++D + + DT T+ + K + Q
Sbjct: 116 HTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYA 175
Query: 154 YDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAY-- 211
M+ G N +YN L+ + ++R A +Y M G P TYS+L+
Sbjct: 176 LRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGK 235
Query: 212 ------IGGYLRE---------------------------DALGIYREMKENRIGVTVDL 238
+ G L+E +A I + M + G V
Sbjct: 236 RRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVT 295
Query: 239 CNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEM 298
+L+ LD A E+FE +K +G ++PD T+ +L+ +S + + +EM
Sbjct: 296 YTVLIDALCTARKLDCAKEVFEKMK-TGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEM 354
Query: 299 IESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGH 343
+ G P++ T LV D GI+P+ H
Sbjct: 355 EKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLH 399
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 158/344 (45%), Gaps = 5/344 (1%)
Query: 11 LRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINC 70
+R R + +P ++V + M ++ + E +F+ M+ LKP+ V++ ++
Sbjct: 309 MREKRAECRP----DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGA 364
Query: 71 ARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLD 130
+ MS A+ + G PD V+ ++ +Y R A+ ++ + E + +
Sbjct: 365 YAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPN 424
Query: 131 TVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYE 190
VT++ALI YG + + ++ M+ G+KPN+ + TLL A R++K + +
Sbjct: 425 VVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLS 484
Query: 191 EMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVG 250
+ GI+ + Y++ + +YI E A+ +Y+ M++ ++ +L+S +
Sbjct: 485 AAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMS 544
Query: 251 FLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVI 310
EA+ ++++ I E +SS++ YS +V+EAE++ N+M +G +P++
Sbjct: 545 KYPEAISYLKEMEDLSIPLTKE-VYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAY 603
Query: 311 TPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTK 354
T ++ Y GI PD C L+ K
Sbjct: 604 TSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNK 647
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 147/338 (43%), Gaps = 4/338 (1%)
Query: 102 VIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLG 161
+I +AR VD A L+ + + + D T+ ALI +G + +N+ DDM
Sbjct: 149 MIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAA 208
Query: 162 VKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDAL 221
+ P+ TYN L+ A + A + ++M NG+ PD +T++ +L AY G AL
Sbjct: 209 IAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKAL 268
Query: 222 GIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIY-QPDESTFSSLIT 280
+ MK ++ N+++ + +G +A+++F ++ +PD TF+S++
Sbjct: 269 SYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMH 328
Query: 281 VYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVP 340
+YS ++ A+ M+ G KPNI L+ Y GI+P
Sbjct: 329 LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIP 388
Query: 341 DGHCCCCLLNIMTKTPMEELGKLIDCIEKANEELGSVVRYLVEGQEEGDQDFIKETSALL 400
D CLLN ++ K + + + +VV Y G F+ E +
Sbjct: 389 DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIF 448
Query: 401 NSTDAEIKKPLCNCLIDLCVYLNLPNRARELFDLGSTL 438
+ + KP ++ +C L +R+++ ++ + L
Sbjct: 449 RQMEQDGIKP---NVVSVCTLLAACSRSKKKVNVDTVL 483
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 129/326 (39%), Gaps = 38/326 (11%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
Y+ + + + A L D+ML+ + P T+ +IN A+E +KM
Sbjct: 181 YDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMT 240
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVT--------------- 133
G PD VT V+ AY A ++ K R DT T
Sbjct: 241 DNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSS 300
Query: 134 ----------------------FSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNT 171
F++++ +Y + + + C V++ M G+KPN+ +YN
Sbjct: 301 QALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNA 360
Query: 172 LLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENR 231
L+ A A + ++K+NGI PD ++Y+ LL +Y A ++ M++ R
Sbjct: 361 LMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKER 420
Query: 232 IGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEA 291
V N L+ GFL EAVEIF ++ GI +P+ + +L+ S K
Sbjct: 421 RKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI-KPNVVSVCTLLAACSRSKKKVNV 479
Query: 292 EAMLNEMIESGFKPNIFVITPLVKCY 317
+ +L+ G N + Y
Sbjct: 480 DTVLSAAQSRGINLNTAAYNSAIGSY 505
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 117/251 (46%), Gaps = 6/251 (2%)
Query: 21 TRGKEL--VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSD 78
+RG L YN A+ + + E A L+ M ++K+K D+VTF +I+ + C MS
Sbjct: 488 SRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGS--CRMSK 545
Query: 79 --RAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSA 136
A+ + ++M ++V+ AY++ V AE ++++ K D + +++
Sbjct: 546 YPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTS 605
Query: 137 LIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNG 196
++ Y E + + ++ +M+ G++P+ + L+ A + +P ++ + M+
Sbjct: 606 MLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKE 665
Query: 197 ISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAV 256
I + + A + A+ + + M +++ L N +L + G ++ +
Sbjct: 666 IPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMM 725
Query: 257 EIFEDIKSSGI 267
++F I +SG+
Sbjct: 726 KLFYKIIASGV 736
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 158/344 (45%), Gaps = 5/344 (1%)
Query: 11 LRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINC 70
+R R + +P ++V + M ++ + E +F+ M+ LKP+ V++ ++
Sbjct: 177 MREKRAECRP----DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGA 232
Query: 71 ARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLD 130
+ MS A+ + G PD V+ ++ +Y R A+ ++ + E + +
Sbjct: 233 YAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPN 292
Query: 131 TVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYE 190
VT++ALI YG + + ++ M+ G+KPN+ + TLL A R++K + +
Sbjct: 293 VVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLS 352
Query: 191 EMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVG 250
+ GI+ + Y++ + +YI E A+ +Y+ M++ ++ +L+S +
Sbjct: 353 AAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMS 412
Query: 251 FLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVI 310
EA+ ++++ I E +SS++ YS +V+EAE++ N+M +G +P++
Sbjct: 413 KYPEAISYLKEMEDLSIPLTKE-VYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAY 471
Query: 311 TPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTK 354
T ++ Y GI PD C L+ K
Sbjct: 472 TSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNK 515
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 147/338 (43%), Gaps = 4/338 (1%)
Query: 102 VIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLG 161
+I +AR VD A L+ + + + D T+ ALI +G + +N+ DDM
Sbjct: 17 MIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAA 76
Query: 162 VKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDAL 221
+ P+ TYN L+ A + A + ++M NG+ PD +T++ +L AY G AL
Sbjct: 77 IAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKAL 136
Query: 222 GIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIY-QPDESTFSSLIT 280
+ MK ++ N+++ + +G +A+++F ++ +PD TF+S++
Sbjct: 137 SYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMH 196
Query: 281 VYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVP 340
+YS ++ A+ M+ G KPNI L+ Y GI+P
Sbjct: 197 LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIP 256
Query: 341 DGHCCCCLLNIMTKTPMEELGKLIDCIEKANEELGSVVRYLVEGQEEGDQDFIKETSALL 400
D CLLN ++ K + + + +VV Y G F+ E +
Sbjct: 257 DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIF 316
Query: 401 NSTDAEIKKPLCNCLIDLCVYLNLPNRARELFDLGSTL 438
+ + KP ++ +C L +R+++ ++ + L
Sbjct: 317 RQMEQDGIKP---NVVSVCTLLAACSRSKKKVNVDTVL 351
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 129/326 (39%), Gaps = 38/326 (11%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
Y+ + + + A L D+ML+ + P T+ +IN A+E +KM
Sbjct: 49 YDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMT 108
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVT--------------- 133
G PD VT V+ AY A ++ K R DT T
Sbjct: 109 DNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSS 168
Query: 134 ----------------------FSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNT 171
F++++ +Y + + + C V++ M G+KPN+ +YN
Sbjct: 169 QALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNA 228
Query: 172 LLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENR 231
L+ A A + ++K+NGI PD ++Y+ LL +Y A ++ M++ R
Sbjct: 229 LMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKER 288
Query: 232 IGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEA 291
V N L+ GFL EAVEIF ++ GI +P+ + +L+ S K
Sbjct: 289 RKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI-KPNVVSVCTLLAACSRSKKKVNV 347
Query: 292 EAMLNEMIESGFKPNIFVITPLVKCY 317
+ +L+ G N + Y
Sbjct: 348 DTVLSAAQSRGINLNTAAYNSAIGSY 373
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 115/249 (46%), Gaps = 2/249 (0%)
Query: 21 TRGKEL--VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSD 78
+RG L YN A+ + + E A L+ M ++K+K D+VTF +I+ + S
Sbjct: 356 SRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYP 415
Query: 79 RAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALI 138
A+ + ++M ++V+ AY++ V AE ++++ K D + +++++
Sbjct: 416 EAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSML 475
Query: 139 KMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGIS 198
Y E + + ++ +M+ G++P+ + L+ A + +P ++ + M+ I
Sbjct: 476 HAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIP 535
Query: 199 PDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEI 258
+ + A + A+ + + M +++ L N +L + G ++ +++
Sbjct: 536 FTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKL 595
Query: 259 FEDIKSSGI 267
F I +SG+
Sbjct: 596 FYKIIASGV 604
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 147/307 (47%), Gaps = 10/307 (3%)
Query: 3 NSETA-PVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDN 61
N+E A V R RD+ KPT YN+ + ++ K + KL+ EM + KP+
Sbjct: 266 NTEEAIDVFQRMKRDRCKPTTET----YNLMINLYGKASKSYMSWKLYCEMRSHQCKPNI 321
Query: 62 VTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDR 121
T+ ++N + ++A E FE++ G EPD ++ +Y+R A ++
Sbjct: 322 CTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSL 381
Query: 122 AKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARK 181
+ D +++ ++ YG + V+++MK LG+ P + ++ LL A +AR
Sbjct: 382 MQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARD 441
Query: 182 PLLAKLIYEEMKRNGISPDYITYSTLLRAY--IGGYLREDALGIYREMKENRIGVTVDLC 239
+ I +EM NG+ PD +++L Y +G + + + I EM+ +
Sbjct: 442 VTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEK--ILAEMENGPCTADISTY 499
Query: 240 NLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMI 299
N+L+++ GFL+ E+F ++K ++PD T++S I YS + + EMI
Sbjct: 500 NILINIYGKAGFLERIEELFVELKEKN-FRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMI 558
Query: 300 ESGFKPN 306
+SG P+
Sbjct: 559 DSGCAPD 565
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 172/381 (45%), Gaps = 15/381 (3%)
Query: 5 ETAPVVLRYLRDKIKPTRGKELVLYNVAMK-VFKKCKDFEGAEKLFDEMLQRKLKPDNVT 63
E A VVL +++ + + +YN ++ + K+ + E A +F M + + KP T
Sbjct: 229 ERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTET 288
Query: 64 FATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAK 123
+ MIN S S + + + +M C+P+ T ++ A+AR + AE ++++ +
Sbjct: 289 YNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQ 348
Query: 124 TENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPL 183
+ D ++AL++ Y ++ M+ +G +P+ +YN ++ A RA
Sbjct: 349 EDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHS 408
Query: 184 LAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLL 243
A+ ++EEMKR GI+P ++ LL AY I +EM EN + + N +L
Sbjct: 409 DAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSML 468
Query: 244 SMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGF 303
++ +G + +I ++++ G D ST++ LI +Y + E + E+ E F
Sbjct: 469 NLYGRLGQFTKMEKILAEMEN-GPCTADISTYNILINIYGKAGFLERIEELFVELKEKNF 527
Query: 304 KPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPMEELGKL 363
+P++ T + Y +D G PDG LL+ +
Sbjct: 528 RPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSS--------- 578
Query: 364 IDCIEKANEELGSVVRYLVEG 384
E+ E++ SV+R + +G
Sbjct: 579 ----EEQVEQVTSVLRTMHKG 595
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 144/301 (47%), Gaps = 11/301 (3%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+++ +N+ + + + ++ AE L+ ++L+ + P T+A +I + + +RA
Sbjct: 176 DVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVL 235
Query: 85 EKMPGFGCEPDAVTCATVIFAY-----ARVENVDMAERLYDRAKTENWRLDTVTFSALIK 139
+M P + TV AY R N + A ++ R K + + T T++ +I
Sbjct: 236 VEMQNHHVSPKTIG-VTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 294
Query: 140 MYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISP 199
+YG +Y +M+ KPN+ TY L+ A R A+ I+E+++ +G+ P
Sbjct: 295 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 354
Query: 200 DYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLC--NLLLSMCADVGFLDEAVE 257
D Y+ L+ +Y A I+ M+ +G D N+++ G +A
Sbjct: 355 DVYVYNALMESYSRAGYPYGAAEIFSLMQ--HMGCEPDRASYNIMVDAYGRAGLHSDAEA 412
Query: 258 IFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+FE++K GI P + L++ YS V++ EA++ EM E+G +P+ FV+ ++ Y
Sbjct: 413 VFEEMKRLGI-APTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLY 471
Query: 318 G 318
G
Sbjct: 472 G 472
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 142/318 (44%), Gaps = 9/318 (2%)
Query: 5 ETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTF 64
E + ++ L + PT Y + +K + E AE + EM + P +
Sbjct: 195 EAESLYVQLLESRYVPTEDT----YALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGV 250
Query: 65 ----ATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYD 120
A + + ++ A++ F++M C+P T +I Y + M+ +LY
Sbjct: 251 TVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYC 310
Query: 121 RAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRAR 180
++ + + T++AL+ + ++ +++ ++ G++P++ YN L+ + RA
Sbjct: 311 EMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAG 370
Query: 181 KPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCN 240
P A I+ M+ G PD +Y+ ++ AY L DA ++ EMK I T+
Sbjct: 371 YPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHM 430
Query: 241 LLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIE 300
LLLS + + + I +++ +G+ +PD +S++ +Y + ++ E +L EM
Sbjct: 431 LLLSAYSKARDVTKCEAIVKEMSENGV-EPDTFVLNSMLNLYGRLGQFTKMEKILAEMEN 489
Query: 301 SGFKPNIFVITPLVKCYG 318
+I L+ YG
Sbjct: 490 GPCTADISTYNILINIYG 507
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 131/322 (40%), Gaps = 46/322 (14%)
Query: 82 EWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMY 141
EW + F +PD + +I AY + AE LY + + T++ LIK Y
Sbjct: 165 EWILRKSSF--QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAY 222
Query: 142 ---GMLE------------------------------------DYDQCLNVYDDMKVLGV 162
G++E + ++ ++V+ MK
Sbjct: 223 CMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRC 282
Query: 163 KPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALG 222
KP TYN ++ +A K ++ +Y EM+ + P+ TY+ L+ A+ L E A
Sbjct: 283 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEE 342
Query: 223 IYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVY 282
I+ +++E+ + V + N L+ + G+ A EIF ++ G +PD ++++ ++ Y
Sbjct: 343 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGC-EPDRASYNIMVDAY 401
Query: 283 SCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDG 342
S+AEA+ EM G P + L+ Y + G+ PD
Sbjct: 402 GRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDT 461
Query: 343 HCCCCLLNIMTK----TPMEEL 360
+LN+ + T ME++
Sbjct: 462 FVLNSMLNLYGRLGQFTKMEKI 483
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 4/173 (2%)
Query: 3 NSETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNV 62
+S+ V R I PT ++L + + K +D E + EM + ++PD
Sbjct: 407 HSDAEAVFEEMKRLGIAPTMKSHMLL----LSAYSKARDVTKCEAIVKEMSENGVEPDTF 462
Query: 63 TFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRA 122
+M+N + + +M C D T +I Y + ++ E L+
Sbjct: 463 VLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 522
Query: 123 KTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPA 175
K +N+R D VT+++ I Y + Y +CL V+++M G P+ GT LL A
Sbjct: 523 KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA 575
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 94/248 (37%), Gaps = 38/248 (15%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++ +YN M+ + + GA ++F M +PD ++ M++ + A F
Sbjct: 355 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF 414
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
E+M G P + ++ AY++ +V E + DT ++++ +YG L
Sbjct: 415 EEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRL 474
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRA------------------------- 179
+ + + +M+ ++ TYN L+ +A
Sbjct: 475 GQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTW 534
Query: 180 --------RKPLLAKL--IYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKE 229
RK L K ++EEM +G +PD T LL A E + R M +
Sbjct: 535 TSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 594
Query: 230 NRIGVTVD 237
GVTV
Sbjct: 595 ---GVTVS 599
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 147/307 (47%), Gaps = 10/307 (3%)
Query: 3 NSETA-PVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDN 61
N+E A V R RD+ KPT YN+ + ++ K + KL+ EM + KP+
Sbjct: 244 NTEEAIDVFQRMKRDRCKPTTET----YNLMINLYGKASKSYMSWKLYCEMRSHQCKPNI 299
Query: 62 VTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDR 121
T+ ++N + ++A E FE++ G EPD ++ +Y+R A ++
Sbjct: 300 CTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSL 359
Query: 122 AKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARK 181
+ D +++ ++ YG + V+++MK LG+ P + ++ LL A +AR
Sbjct: 360 MQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARD 419
Query: 182 PLLAKLIYEEMKRNGISPDYITYSTLLRAY--IGGYLREDALGIYREMKENRIGVTVDLC 239
+ I +EM NG+ PD +++L Y +G + + + I EM+ +
Sbjct: 420 VTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEK--ILAEMENGPCTADISTY 477
Query: 240 NLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMI 299
N+L+++ GFL+ E+F ++K ++PD T++S I YS + + EMI
Sbjct: 478 NILINIYGKAGFLERIEELFVELKEKN-FRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMI 536
Query: 300 ESGFKPN 306
+SG P+
Sbjct: 537 DSGCAPD 543
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 172/381 (45%), Gaps = 15/381 (3%)
Query: 5 ETAPVVLRYLRDKIKPTRGKELVLYNVAMK-VFKKCKDFEGAEKLFDEMLQRKLKPDNVT 63
E A VVL +++ + + +YN ++ + K+ + E A +F M + + KP T
Sbjct: 207 ERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTET 266
Query: 64 FATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAK 123
+ MIN S S + + + +M C+P+ T ++ A+AR + AE ++++ +
Sbjct: 267 YNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQ 326
Query: 124 TENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPL 183
+ D ++AL++ Y ++ M+ +G +P+ +YN ++ A RA
Sbjct: 327 EDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHS 386
Query: 184 LAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLL 243
A+ ++EEMKR GI+P ++ LL AY I +EM EN + + N +L
Sbjct: 387 DAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSML 446
Query: 244 SMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGF 303
++ +G + +I ++++ G D ST++ LI +Y + E + E+ E F
Sbjct: 447 NLYGRLGQFTKMEKILAEMEN-GPCTADISTYNILINIYGKAGFLERIEELFVELKEKNF 505
Query: 304 KPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPMEELGKL 363
+P++ T + Y +D G PDG LL+ +
Sbjct: 506 RPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSS--------- 556
Query: 364 IDCIEKANEELGSVVRYLVEG 384
E+ E++ SV+R + +G
Sbjct: 557 ----EEQVEQVTSVLRTMHKG 573
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 144/301 (47%), Gaps = 11/301 (3%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+++ +N+ + + + ++ AE L+ ++L+ + P T+A +I + + +RA
Sbjct: 154 DVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVL 213
Query: 85 EKMPGFGCEPDAVTCATVIFAY-----ARVENVDMAERLYDRAKTENWRLDTVTFSALIK 139
+M P + TV AY R N + A ++ R K + + T T++ +I
Sbjct: 214 VEMQNHHVSPKTIG-VTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 272
Query: 140 MYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISP 199
+YG +Y +M+ KPN+ TY L+ A R A+ I+E+++ +G+ P
Sbjct: 273 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 332
Query: 200 DYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLC--NLLLSMCADVGFLDEAVE 257
D Y+ L+ +Y A I+ M+ +G D N+++ G +A
Sbjct: 333 DVYVYNALMESYSRAGYPYGAAEIFSLMQ--HMGCEPDRASYNIMVDAYGRAGLHSDAEA 390
Query: 258 IFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+FE++K GI P + L++ YS V++ EA++ EM E+G +P+ FV+ ++ Y
Sbjct: 391 VFEEMKRLGI-APTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLY 449
Query: 318 G 318
G
Sbjct: 450 G 450
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 142/318 (44%), Gaps = 9/318 (2%)
Query: 5 ETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTF 64
E + ++ L + PT Y + +K + E AE + EM + P +
Sbjct: 173 EAESLYVQLLESRYVPTEDT----YALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGV 228
Query: 65 ----ATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYD 120
A + + ++ A++ F++M C+P T +I Y + M+ +LY
Sbjct: 229 TVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYC 288
Query: 121 RAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRAR 180
++ + + T++AL+ + ++ +++ ++ G++P++ YN L+ + RA
Sbjct: 289 EMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAG 348
Query: 181 KPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCN 240
P A I+ M+ G PD +Y+ ++ AY L DA ++ EMK I T+
Sbjct: 349 YPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHM 408
Query: 241 LLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIE 300
LLLS + + + I +++ +G+ +PD +S++ +Y + ++ E +L EM
Sbjct: 409 LLLSAYSKARDVTKCEAIVKEMSENGV-EPDTFVLNSMLNLYGRLGQFTKMEKILAEMEN 467
Query: 301 SGFKPNIFVITPLVKCYG 318
+I L+ YG
Sbjct: 468 GPCTADISTYNILINIYG 485
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 131/322 (40%), Gaps = 46/322 (14%)
Query: 82 EWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMY 141
EW + F +PD + +I AY + AE LY + + T++ LIK Y
Sbjct: 143 EWILRKSSF--QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAY 200
Query: 142 ---GMLE------------------------------------DYDQCLNVYDDMKVLGV 162
G++E + ++ ++V+ MK
Sbjct: 201 CMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRC 260
Query: 163 KPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALG 222
KP TYN ++ +A K ++ +Y EM+ + P+ TY+ L+ A+ L E A
Sbjct: 261 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEE 320
Query: 223 IYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVY 282
I+ +++E+ + V + N L+ + G+ A EIF ++ G +PD ++++ ++ Y
Sbjct: 321 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGC-EPDRASYNIMVDAY 379
Query: 283 SCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDG 342
S+AEA+ EM G P + L+ Y + G+ PD
Sbjct: 380 GRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDT 439
Query: 343 HCCCCLLNIMTK----TPMEEL 360
+LN+ + T ME++
Sbjct: 440 FVLNSMLNLYGRLGQFTKMEKI 461
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 4/173 (2%)
Query: 3 NSETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNV 62
+S+ V R I PT ++L + + K +D E + EM + ++PD
Sbjct: 385 HSDAEAVFEEMKRLGIAPTMKSHMLL----LSAYSKARDVTKCEAIVKEMSENGVEPDTF 440
Query: 63 TFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRA 122
+M+N + + +M C D T +I Y + ++ E L+
Sbjct: 441 VLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 500
Query: 123 KTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPA 175
K +N+R D VT+++ I Y + Y +CL V+++M G P+ GT LL A
Sbjct: 501 KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA 553
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 94/247 (38%), Gaps = 38/247 (15%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++ +YN M+ + + GA ++F M +PD ++ M++ + A F
Sbjct: 333 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF 392
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
E+M G P + ++ AY++ +V E + DT ++++ +YG L
Sbjct: 393 EEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRL 452
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRA------------------------- 179
+ + + +M+ ++ TYN L+ +A
Sbjct: 453 GQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTW 512
Query: 180 --------RKPLLAKL--IYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKE 229
RK L K ++EEM +G +PD T LL A E + R M +
Sbjct: 513 TSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 572
Query: 230 NRIGVTV 236
GVTV
Sbjct: 573 ---GVTV 576
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 135/292 (46%), Gaps = 1/292 (0%)
Query: 12 RYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCA 71
R L D I+ +V ++ + F K AEKL+DEM++R + PD T++++IN
Sbjct: 314 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Query: 72 RLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDT 131
+ D A FE M C P+ VT +T+I + + + V+ L+ +T
Sbjct: 374 CMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 132 VTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEE 191
VT++ LI + D D V+ M +GV PN+ TYN LL + + K A +++E
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 493
Query: 192 MKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGF 251
++R+ + PD TY+ ++ ED ++ + + V N ++S G
Sbjct: 494 LQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGS 553
Query: 252 LDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGF 303
+EA + + +K G P+ T+++LI + ++ EM GF
Sbjct: 554 KEEADSLLKKMKEDGPL-PNSGTYNTLIRARLRDGDREASAELIKEMRSCGF 604
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 138/302 (45%), Gaps = 1/302 (0%)
Query: 16 DKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCS 75
D +K +V +N + K FE L ++M + D T++ INC S
Sbjct: 73 DMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRS 132
Query: 76 MSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFS 135
A+ KM G EPD VT ++++ Y + + A L D+ ++ DT TF+
Sbjct: 133 QLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFT 192
Query: 136 ALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRN 195
LI + + + + D M G +P+L TY T++ + + LA + ++M++
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKG 252
Query: 196 GISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEA 255
I D + Y+T++ +DAL ++ EM I V + L+S + G +A
Sbjct: 253 KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA 312
Query: 256 VEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
+ D+ I P+ TFS+LI + K+ EAE + +EMI+ P+IF + L+
Sbjct: 313 SRLLSDMIERKI-NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 371
Query: 316 CY 317
+
Sbjct: 372 GF 373
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 134/278 (48%), Gaps = 1/278 (0%)
Query: 40 KDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTC 99
K A L D+M++ KPD TF T+I+ L + + AV ++M GC+PD VT
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 100 ATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKV 159
TV+ + ++D+A L + + D V ++ +I + D LN++ +M
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN 286
Query: 160 LGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLRED 219
G++P++ TY++L+ + + A + +M I+P+ +T+S L+ A++ +
Sbjct: 287 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 346
Query: 220 ALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLI 279
A +Y EM + I + + L++ LDEA +FE + S + P+ T+S+LI
Sbjct: 347 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYSTLI 405
Query: 280 TVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ +V E + EM + G N T L+ +
Sbjct: 406 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 132/275 (48%), Gaps = 1/275 (0%)
Query: 43 EGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATV 102
+ A LF +M++ + P V F +++ + + + E+M G D T +
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 103 IFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGV 162
I + R + +A + + + D VT S+L+ Y + + + D M +G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 163 KPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALG 222
KP+ T+ TL+ ++ K A + ++M + G PD +TY T++ + AL
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 223 IYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVY 282
+ ++M++ +I V + N ++ +D+A+ +F ++ + GI +PD T+SSLI+
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI-RPDVFTYSSLISCL 303
Query: 283 SCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ + S+A +L++MIE PN+ + L+ +
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 338
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 110/233 (47%), Gaps = 7/233 (3%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINC---ARLCSMSDRAVE 82
+V Y+ +K F K K E +LF EM QR L + VT+ T+I+ AR C D A
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC---DNAQM 454
Query: 83 WFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG 142
F++M G P+ +T ++ + + A +++ + D T++ +I+
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 514
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
+ ++ ++ + GV PN+ YNT++ R A + ++MK +G P+
Sbjct: 515 KAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSG 574
Query: 203 TYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEA 255
TY+TL+RA + RE + + +EM+ L+ +M D G LD++
Sbjct: 575 TYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD-GRLDKS 626
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 147/291 (50%), Gaps = 8/291 (2%)
Query: 15 RDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLC 74
+ KIKP +++ +N + F K F AE+L++EM++ + P+ T+ ++IN +
Sbjct: 240 KRKIKP----DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCME 295
Query: 75 SMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTF 134
D A + F M GC PD V ++I + + + VD A +++ + +T+T+
Sbjct: 296 GCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITY 355
Query: 135 SALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKR 194
+ LI+ +G + + V+ M GV PN+ TYN LL + K A +I+E+M++
Sbjct: 356 TTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQK 415
Query: 195 ---NGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGF 251
+G++P+ TY+ LL E AL ++ +M++ + + + +++ G
Sbjct: 416 REMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGK 475
Query: 252 LDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESG 302
+ AV +F + S G+ +P+ T++++I+ EA + +M E G
Sbjct: 476 VKNAVNLFCSLPSKGV-KPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 137/290 (47%), Gaps = 7/290 (2%)
Query: 30 NVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPG 89
N+ M F + A +M++ +PD VTF ++IN L + + A+ +M
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 90 FGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMY---GMLED 146
G +PD V T+I + + +V+ A L+D+ + R D V +++L+ G D
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 147 YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYST 206
D L M +KP++ T+N L+ A + K L A+ +Y EM R I+P+ TY++
Sbjct: 231 ADSLLR---GMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287
Query: 207 LLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSG 266
L+ + ++A ++ M+ V L++ +D+A++IF ++ G
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
Query: 267 IYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKC 316
+ + T+++LI + K + A+ + + M+ G PNI L+ C
Sbjct: 348 L-TGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHC 396
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 142/324 (43%), Gaps = 14/324 (4%)
Query: 33 MKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGC 92
+ V K K F+ L D + + D T ++NC S A + KM G
Sbjct: 79 LNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGF 138
Query: 93 EPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLN 152
EPD VT ++I + ++ A + ++ + D V ++ +I + L+
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 153 VYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYI 212
++D M+ G++P++ Y +L+ + + + A + M + I PD IT++ L+ A++
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 213 --GGYLREDALGIYREMKENRIGVTV-DLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQ 269
G +L DA +Y EM I + +L+ C + G +DEA ++F +++ G +
Sbjct: 259 KEGKFL--DAEELYNEMIRMSIAPNIFTYTSLINGFCME-GCVDEARQMFYLMETKGCF- 314
Query: 270 PDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXX 329
PD ++SLI + KV +A + EM + G N T L++ +G
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374
Query: 330 XXRGLDWGIVPDG-------HCCC 346
+ G+ P+ HC C
Sbjct: 375 FSHMVSRGVPPNIRTYNVLLHCLC 398
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 121/277 (43%), Gaps = 1/277 (0%)
Query: 41 DFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCA 100
F A LF M++ + P + F ++N D + + + G D TC
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 101 TVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVL 160
++ + + +A + + D VTF++LI + + ++ +++ + M +
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 161 GVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDA 220
G+KP++ Y T++ ++ + A ++++M+ GI PD + Y++L+ DA
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 221 LGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLIT 280
+ R M + +I V N L+ G +A E++ ++ I P+ T++SLI
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI-APNIFTYTSLIN 290
Query: 281 VYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ V EA M M G P++ T L+ +
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGF 327
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 83/217 (38%), Gaps = 48/217 (22%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++V Y + F KCK + A K+F EM Q+ L + +T+ T+I + A E F
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVF 375
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENV--------DMAERLYDRAKTENWRLDTVTFSA 136
M G P+ T ++ V DM +R D W T++
Sbjct: 376 SHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIW-----TYNV 430
Query: 137 LIKMYGMLEDYDQCLNVYDDMK-----------------------------------VLG 161
L+ ++ L V++DM+ G
Sbjct: 431 LLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKG 490
Query: 162 VKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGIS 198
VKPN+ TY T++ ++R A +++ +MK +G+S
Sbjct: 491 VKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 165/359 (45%), Gaps = 39/359 (10%)
Query: 29 YNVAM-KVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKM 87
YN + + ++ AE +F EML+ ++ P+ T+ +I D A+ F+KM
Sbjct: 172 YNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM 231
Query: 88 PGFGCEPDAVTCATVIFAYARVENVDMAERL---------------YD----------RA 122
GC P+ VT T+I Y ++ +D +L Y+ R
Sbjct: 232 ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRM 291
Query: 123 K------TE----NWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTL 172
K TE + LD VT++ LIK Y ++ Q L ++ +M G+ P++ TY +L
Sbjct: 292 KEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSL 351
Query: 173 LPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIG-GYLREDALGIYREMKENR 231
+ ++ +A A ++M+ G+ P+ TY+TL+ + GY+ E A + REM +N
Sbjct: 352 IHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE-AYRVLREMNDNG 410
Query: 232 IGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEA 291
+V N L++ G +++A+ + ED+K G+ PD ++S++++ + V EA
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL-SPDVVSYSTVLSGFCRSYDVDEA 469
Query: 292 EAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLN 350
+ EM+E G KP+ + L++ + L G+ PD L+N
Sbjct: 470 LRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALIN 528
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 135/295 (45%), Gaps = 38/295 (12%)
Query: 22 RGKEL--VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDR 79
RG L V YN +K + K +F A + EML+ L P +T+ ++I+ +R
Sbjct: 304 RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNR 363
Query: 80 AVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIK 139
A+E+ ++M G P+ T T++ +++ ++ A R+ + VT++ALI
Sbjct: 364 AMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALIN 423
Query: 140 MYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISP 199
+ + + + V +DMK G+ P++ +Y+T+L R+ A + EM GI P
Sbjct: 424 GHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKP 483
Query: 200 DYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIF 259
D ITYS+L++ + ++A +Y EM R+G+
Sbjct: 484 DTITYSSLIQGFCEQRRTKEACDLYEEML--RVGL------------------------- 516
Query: 260 EDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
PDE T+++LI Y + +A + NEM+E G P++ + L+
Sbjct: 517 ---------PPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 91/217 (41%), Gaps = 37/217 (17%)
Query: 134 FSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPL-LAKLIYEEM 192
F ++K Y L D+ L++ + G P + +YN +L A R+++ + A+ +++EM
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 193 KRNGISPDYITYSTLLRAY-------------------------------IGGYLR---- 217
+ +SP+ TY+ L+R + I GY +
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 218 EDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSS 277
+D + R M + + N++++ G + E + ++ G Y DE T+++
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG-YSLDEVTYNT 315
Query: 278 LITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
LI Y +A M EM+ G P++ T L+
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLI 352
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 11 LRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINC 70
LR R+ ++ + + Y+ ++ F + + + A L++EML+ L PD T+ +IN
Sbjct: 470 LRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 529
Query: 71 ARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLD 130
+ ++A++ +M G PD VT + +I + A+RL + E
Sbjct: 530 YCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPS 589
Query: 131 TVTFSALIK------------------MYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTL 172
VT+ LI+ M GM+ + DQ V++ M KP+ YN +
Sbjct: 590 DVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQ---VFESMLGKNHKPDGTAYNIM 646
Query: 173 LPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRA 210
+ RA A +Y+EM ++G +T L++A
Sbjct: 647 IHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKA 684
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 139/281 (49%), Gaps = 3/281 (1%)
Query: 39 CKD--FEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDA 96
C D ++ K+ EM+ R + PD VTF+ +I+ A E + +M G PD
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 97 VTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDD 156
+T ++I + + + A +++D ++ D VT+S LI Y + D + ++ +
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 157 MKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYL 216
+ G+ PN TYNTL+ ++ K AK +++EM G+ P +TY LL
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470
Query: 217 REDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFS 276
AL I+ +M+++R+ + + + N+++ + +D+A +F + G+ +PD T++
Sbjct: 471 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV-KPDVVTYN 529
Query: 277 SLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+I +SEA+ + +M E G P+ F L++ +
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAH 570
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 130/271 (47%), Gaps = 3/271 (1%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIF 104
A L D M++ K +PD VT +T+IN L A+ ++M +G +PD VT V+
Sbjct: 159 AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 218
Query: 105 AYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKP 164
+ N +A L+ + + N + V +S +I +D L+++++M++ G+K
Sbjct: 219 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278
Query: 165 NLGTYNTLLPAVYRARK-PLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGI 223
++ TY++L+ + K AK++ E + RN I PD +T+S L+ ++ +A +
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN-IIPDVVTFSALIDVFVKEGKLLEAKEL 337
Query: 224 YREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYS 283
Y EM I N L+ L EA ++F+ + S G +PD T+S LI Y
Sbjct: 338 YNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC-EPDIVTYSILINSYC 396
Query: 284 CFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
+V + + E+ G PN LV
Sbjct: 397 KAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 132/298 (44%), Gaps = 3/298 (1%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIF 104
A LF+ M+Q + P + F + + D + + + M G E D T +I
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMIN 113
Query: 105 AYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKP 164
Y R + + A + RA + DT+TFS L+ + + + + + D M + +P
Sbjct: 114 CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 173
Query: 165 NLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIY 224
+L T +TL+ + + A ++ + M G PD +TY +L AL ++
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 225 REMKENRIGVTVDLCNLLL-SMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYS 283
R+M+E I +V ++++ S+C D G D+A+ +F +++ GI + D T+SSLI
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKD-GSFDDALSLFNEMEMKGI-KADVVTYSSLIGGLC 291
Query: 284 CFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPD 341
K + ML EMI P++ + L+ + + GI PD
Sbjct: 292 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 117/267 (43%), Gaps = 13/267 (4%)
Query: 57 LKPDNVTFATMINC-----ARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVEN 111
++ D T MINC L + S W G EPD +T +T++ +
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAW-----KLGYEPDTITFSTLVNGFCLEGR 155
Query: 112 VDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNT 171
V A L DR R D VT S LI + + L + D M G +P+ TY
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215
Query: 172 LLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENR 231
+L + ++ LA ++ +M+ I + YS ++ + +DAL ++ EM+
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 232 IGV-TVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSE 290
I V +L+ +C D G D+ ++ ++ I PD TFS+LI V+ K+ E
Sbjct: 276 IKADVVTYSSLIGGLCND-GKWDDGAKMLREMIGRNII-PDVVTFSALIDVFVKEGKLLE 333
Query: 291 AEAMLNEMIESGFKPNIFVITPLVKCY 317
A+ + NEMI G P+ L+ +
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGF 360
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 127/271 (46%), Gaps = 15/271 (5%)
Query: 21 TRG--KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSD 78
TRG + + YN + F K A ++FD M+ + +PD VT++ +IN D
Sbjct: 343 TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD 402
Query: 79 RAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALI 138
+ F ++ G P+ +T T++ + + ++ A+ L+ + VT+ L+
Sbjct: 403 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462
Query: 139 KMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGIS 198
+ ++ L +++ M+ + +G YN ++ + A K A ++ + G+
Sbjct: 463 DGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVK 522
Query: 199 PDYITYSTLLRAYIGGYLREDALG----IYREMKENRIGVTVD--LCNLLLSMCADVGFL 252
PD +TY+ + IGG ++ +L ++R+MKE+ G T D N+L+ L
Sbjct: 523 PDVVTYNVM----IGGLCKKGSLSEADMLFRKMKED--GCTPDDFTYNILIRAHLGGSGL 576
Query: 253 DEAVEIFEDIKSSGIYQPDESTFSSLITVYS 283
+VE+ E++K G + D ST +I + S
Sbjct: 577 ISSVELIEEMKVCG-FSADSSTIKMVIDMLS 606
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 141/315 (44%), Gaps = 3/315 (0%)
Query: 28 LYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKM 87
++N+ M F K + A+K+FDE+ +R L+P V+F T+IN D +M
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301
Query: 88 PGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDY 147
PD T + +I A + +D A L+D + V F+ LI + +
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI 361
Query: 148 DQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTL 207
D Y M G++P++ YNTL+ + + A+ I + M R G+ PD ITY+TL
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTL 421
Query: 208 LRAYIGGYLREDALGIYREMKENRIGV-TVDLCNLLLSMCADVGFLDEAVEIFEDIKSSG 266
+ + G E AL I +EM +N I + V L+ MC + G + +A ++ +G
Sbjct: 422 IDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKE-GRVIDAERALREMLRAG 480
Query: 267 IYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXX 326
I +PD+ T++ ++ + +L EM G P++ L+
Sbjct: 481 I-KPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA 539
Query: 327 XXXXXRGLDWGIVPD 341
L+ G+VPD
Sbjct: 540 DMLLDAMLNIGVVPD 554
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 136/278 (48%), Gaps = 2/278 (0%)
Query: 14 LRDKIKPTRGK-ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCAR 72
L+ +++ +R + ++ Y+ + K +GA LFDEM +R L P++V F T+I+
Sbjct: 297 LKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHS 356
Query: 73 LCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTV 132
D E ++KM G +PD V T++ + + ++ A + D R D +
Sbjct: 357 RNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKI 416
Query: 133 TFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEM 192
T++ LI + D + L + +M G++ + ++ L+ + + + + A+ EM
Sbjct: 417 TYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREM 476
Query: 193 KRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFL 252
R GI PD +TY+ ++ A+ + + +EM+ + +V N+LL+ +G +
Sbjct: 477 LRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQM 536
Query: 253 DEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSE 290
A + + + + G+ PD+ T+++L+ + A S+
Sbjct: 537 KNADMLLDAMLNIGVV-PDDITYNTLLEGHHRHANSSK 573
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 143/320 (44%), Gaps = 17/320 (5%)
Query: 4 SETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVT 63
S+ V + ++PT +V +N + + K + + +L +M + + +PD T
Sbjct: 257 SDAQKVFDEITKRSLQPT----VVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFT 312
Query: 64 FATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAK 123
++ +IN + D A F++M G P+ V T+I ++R +D+ + Y +
Sbjct: 313 YSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKML 372
Query: 124 TENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPL 183
++ + D V ++ L+ + D N+ D M G++P+ TY TL+ R
Sbjct: 373 SKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVE 432
Query: 184 LAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLRE----DALGIYREMKENRIGVTVDLC 239
A I +EM +NGI D + +S L + G +E DA REM R G+ D
Sbjct: 433 TALEIRKEMDQNGIELDRVGFSAL----VCGMCKEGRVIDAERALREML--RAGIKPDDV 486
Query: 240 NLLLSMCA--DVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNE 297
+ M A G ++ ++++S G + P T++ L+ ++ A+ +L+
Sbjct: 487 TYTMMMDAFCKKGDAQTGFKLLKEMQSDG-HVPSVVTYNVLLNGLCKLGQMKNADMLLDA 545
Query: 298 MIESGFKPNIFVITPLVKCY 317
M+ G P+ L++ +
Sbjct: 546 MLNIGVVPDDITYNTLLEGH 565
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 9/218 (4%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSD--RAVE 82
++VLYN + F K D A + D M++R L+PD +T+ T+I+ C D A+E
Sbjct: 379 DIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDG--FCRGGDVETALE 436
Query: 83 WFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG 142
++M G E D V + ++ + V AER + D VT++ ++ +
Sbjct: 437 IRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFC 496
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
D + +M+ G P++ TYN LL + + + A ++ + M G+ PD I
Sbjct: 497 KKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDI 556
Query: 203 TYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCN 240
TY+TLL + A R +++ IG+ DL +
Sbjct: 557 TYNTLLEGH-----HRHANSSKRYIQKPEIGIVADLAS 589
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 102/249 (40%), Gaps = 27/249 (10%)
Query: 90 FGCEPDAVTCATVIFAYARVENVDMAER----LYDRAKTEN----------------WRL 129
G PDA+ C F +R D+ R L DR N + L
Sbjct: 183 LGFIPDAIQC----FRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPL 238
Query: 130 DTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIY 189
+ F+ L+ + + V+D++ ++P + ++NTL+ + +
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 190 EEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREM-KENRIGVTVDLCNLLLSMCAD 248
+M+++ PD TYS L+ A + A G++ EM K I V L+ +
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 249 VGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIF 308
G +D E ++ + S G+ QPD +++L+ + + A +++ MI G +P+
Sbjct: 359 -GEIDLMKESYQKMLSKGL-QPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKI 416
Query: 309 VITPLVKCY 317
T L+ +
Sbjct: 417 TYTTLIDGF 425
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 143/293 (48%), Gaps = 1/293 (0%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++++Y ++ F ++ KL +M++RK+ PD V F+ +I+C A E
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
++M G PD VT ++I + + +D A + D ++ + TF+ LI Y
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
D L ++ M + GV + TYNTL+ K +AK +++EM + PD ++Y
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
LL E AL I+ +++++++ + + + N+++ + +D+A ++F +
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
G+ +PD T++ +I +SEA+ + +M E G PN L++ +
Sbjct: 521 KGV-KPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAH 572
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 139/303 (45%), Gaps = 1/303 (0%)
Query: 12 RYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCA 71
+ LRD IK ++V ++ + F K AE+L EM+QR + PD VT+ ++I+
Sbjct: 303 KLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGF 362
Query: 72 RLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDT 131
+ D+A + M GC P+ T +I Y + +D L+ + DT
Sbjct: 363 CKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422
Query: 132 VTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEE 191
VT++ LI+ + L + ++ +M V+P++ +Y LL + +P A I+E+
Sbjct: 423 VTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482
Query: 192 MKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGF 251
++++ + D Y+ ++ +DA ++ + + V N+++ G
Sbjct: 483 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS 542
Query: 252 LDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVIT 311
L EA +F ++ G + P+ T++ LI + +++ ++ E+ GF + +
Sbjct: 543 LSEADLLFRKMEEDG-HSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVK 601
Query: 312 PLV 314
+V
Sbjct: 602 MVV 604
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 127/264 (48%), Gaps = 9/264 (3%)
Query: 48 LFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYA 107
L D M++ +P+ VT+ ++ + A+E KM + DAV + +I
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 108 RVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLG 167
+ ++D A L++ + + ++ D + ++ LI+ + +D + DM + P++
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 168 TYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREM 227
++ L+ + K A+ +++EM + GISPD +TY++L I G+ +E+ L M
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL----IDGFCKENQLDKANHM 374
Query: 228 KENRI----GVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYS 283
+ + G + N+L++ +D+ +E+F + G+ D T+++LI +
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV-ADTVTYNTLIQGFC 433
Query: 284 CFAKVSEAEAMLNEMIESGFKPNI 307
K+ A+ + EM+ +P+I
Sbjct: 434 ELGKLEVAKELFQEMVSRRVRPDI 457
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 128/298 (42%), Gaps = 3/298 (1%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIF 104
A LF EM + + +P + F+ + + D ++ ++M G + T + +I
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 105 AYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKP 164
R + +A + + DTVTFS LI + + L + D M +G KP
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 165 NLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIY 224
L T N L+ + K A L+ + M G P+ +TY +L+ A+ +
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 225 REMKENRIGV-TVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYS 283
R+M+E +I + V ++ +C D G LD A +F +++ G ++ D +++LI +
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKD-GSLDNAFNLFNEMEIKG-FKADIIIYTTLIRGFC 293
Query: 284 CFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPD 341
+ + +L +MI+ P++ + L+ C+ + GI PD
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 121/289 (41%), Gaps = 1/289 (0%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
L+ ++ V + K ++ L +M + + + T + MINC C A
Sbjct: 72 LIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMG 131
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
K+ G EPD VT +T+I V A L DR + +T +AL+ +
Sbjct: 132 KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNG 191
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
+ + D M G +PN TY +L + ++ + LA + +M+ I D + YS
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251
Query: 206 TLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSS 265
++ ++A ++ EM+ + + L+ G D+ ++ D+
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311
Query: 266 GIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
I PD FS+LI + K+ EAE + EMI+ G P+ T L+
Sbjct: 312 KI-TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLI 359
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 126/280 (45%), Gaps = 1/280 (0%)
Query: 38 KCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAV 97
+C+ A ++++ +PD VTF+T+IN L A+E ++M G +P +
Sbjct: 119 RCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLI 178
Query: 98 TCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDM 157
T ++ V A L DR ++ + VT+ ++K+ + + M
Sbjct: 179 TLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM 238
Query: 158 KVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLR 217
+ +K + Y+ ++ + + A ++ EM+ G D I Y+TL+R +
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 218 EDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSS 277
+D + R+M + +I V + L+ G L EA E+ +++ GI PD T++S
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI-SPDTVTYTS 357
Query: 278 LITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
LI + ++ +A ML+ M+ G PNI L+ Y
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 139/286 (48%), Gaps = 7/286 (2%)
Query: 36 FKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPD 95
+ K +F GAE++ + + P+ +++ ++ + A F +M G EP
Sbjct: 149 YGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPS 208
Query: 96 AVTCATVIFAYARVENVDMAERLYDR---AKTENWRLDTVTFSALIKMYGMLEDYDQCLN 152
A+T ++ + + AE +++ K + D + +I MY +Y++
Sbjct: 209 AITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARK 268
Query: 153 VYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYI 212
V+ M GV + TYN+L+ + ++K IY++M+R+ I PD ++Y+ L++AY
Sbjct: 269 VFSSMVGKGVPQSTVTYNSLMS--FETSYKEVSK-IYDQMQRSDIQPDVVSYALLIKAYG 325
Query: 213 GGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDE 272
E+AL ++ EM + + T N+LL A G +++A +F+ ++ I+ PD
Sbjct: 326 RARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIF-PDL 384
Query: 273 STFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
+++++++ Y + + AE + GF+PNI L+K Y
Sbjct: 385 WSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYA 430
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 137/283 (48%), Gaps = 7/283 (2%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRK---LKPDNVTFATMINCARLCSMSDRAVEW 83
+ Y + +K F + F+ AE++F+ +L K LKPD + MI + ++A +
Sbjct: 210 ITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKV 269
Query: 84 FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGM 143
F M G G VT +++ + V ++YD+ + + + D V+++ LIK YG
Sbjct: 270 FSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVSYALLIKAYGR 326
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYIT 203
++ L+V+++M GV+P YN LL A + AK +++ M+R+ I PD +
Sbjct: 327 ARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWS 386
Query: 204 YSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIK 263
Y+T+L AY+ E A ++ +K + + L+ A +++ +E++E ++
Sbjct: 387 YTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMR 446
Query: 264 SSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
SGI + +++ ++++ A EM G P+
Sbjct: 447 LSGI-KANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPD 488
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 102/204 (50%), Gaps = 4/204 (1%)
Query: 5 ETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTF 64
E + + + R I+P ++V Y + +K + + + E A +F+EML ++P + +
Sbjct: 297 EVSKIYDQMQRSDIQP----DVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAY 352
Query: 65 ATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKT 124
+++ + M ++A F+ M PD + T++ AY +++ AE+ + R K
Sbjct: 353 NILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKV 412
Query: 125 ENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLL 184
+ + + VT+ LIK Y D ++ + VY+ M++ G+K N T++ A R +
Sbjct: 413 DGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGS 472
Query: 185 AKLIYEEMKRNGISPDYITYSTLL 208
A Y+EM+ G+ PD + LL
Sbjct: 473 ALGWYKEMESCGVPPDQKAKNVLL 496
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 135/288 (46%), Gaps = 4/288 (1%)
Query: 7 APVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFAT 66
A V L D+ K + +Y++ + ++KK ++E A K+F M+ + + VT+ +
Sbjct: 228 AEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNS 287
Query: 67 MINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTEN 126
+++ + + +++M +PD V+ A +I AY R + A +++
Sbjct: 288 LMS---FETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAG 344
Query: 127 WRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAK 186
R ++ L+ + + +Q V+ M+ + P+L +Y T+L A A A+
Sbjct: 345 VRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAE 404
Query: 187 LIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMC 246
++ +K +G P+ +TY TL++ Y E + +Y +M+ + I + ++
Sbjct: 405 KFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDAS 464
Query: 247 ADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAM 294
A+ +++++S G+ PD+ + L+++ S ++ EA+ +
Sbjct: 465 GRCKNFGSALGWYKEMESCGV-PPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 110/241 (45%), Gaps = 7/241 (2%)
Query: 127 WRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAK 186
W + F LI YG L +++ V + +G PN+ +Y L+ + R K A+
Sbjct: 135 WNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAE 194
Query: 187 LIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREM---KENRIGVTVDLCNLLL 243
I+ M+ +G P ITY +L+ ++ G ++A ++ + K++ + + ++++
Sbjct: 195 AIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMI 254
Query: 244 SMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGF 303
M G ++A ++F + G+ Q T++SL++ + + +VS+ + ++M S
Sbjct: 255 YMYKKAGNYEKARKVFSSMVGKGVPQ-STVTYNSLMSFETSYKEVSK---IYDQMQRSDI 310
Query: 304 KPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPMEELGKL 363
+P++ L+K YG LD G+ P LL+ + M E K
Sbjct: 311 QPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKT 370
Query: 364 I 364
+
Sbjct: 371 V 371
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 95/207 (45%), Gaps = 7/207 (3%)
Query: 102 VIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLG 161
+I AY ++ N + AER+ + ++++AL++ YG + ++ M+ G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 162 VKPNLGTYNTLLPAVYRARKPLLAKLIYEEM---KRNGISPDYITYSTLLRAYIGGYLRE 218
+P+ TY +L K A+ ++E + K++ + PD Y ++ Y E
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 219 DALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSL 278
A ++ M + + N L+S E +I++ ++ S I QPD +++ L
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSLMSFETS---YKEVSKIYDQMQRSDI-QPDVVSYALL 320
Query: 279 ITVYSCFAKVSEAEAMLNEMIESGFKP 305
I Y + EA ++ EM+++G +P
Sbjct: 321 IKAYGRARREEEALSVFEEMLDAGVRP 347
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 139/286 (48%), Gaps = 7/286 (2%)
Query: 36 FKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPD 95
+ K +F GAE++ + + P+ +++ ++ + A F +M G EP
Sbjct: 156 YGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPS 215
Query: 96 AVTCATVIFAYARVENVDMAERLYDR---AKTENWRLDTVTFSALIKMYGMLEDYDQCLN 152
A+T ++ + + AE +++ K + D + +I MY +Y++
Sbjct: 216 AITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARK 275
Query: 153 VYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYI 212
V+ M GV + TYN+L+ + ++K IY++M+R+ I PD ++Y+ L++AY
Sbjct: 276 VFSSMVGKGVPQSTVTYNSLMS--FETSYKEVSK-IYDQMQRSDIQPDVVSYALLIKAYG 332
Query: 213 GGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDE 272
E+AL ++ EM + + T N+LL A G +++A +F+ ++ I+ PD
Sbjct: 333 RARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIF-PDL 391
Query: 273 STFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
+++++++ Y + + AE + GF+PNI L+K Y
Sbjct: 392 WSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYA 437
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 137/283 (48%), Gaps = 7/283 (2%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRK---LKPDNVTFATMINCARLCSMSDRAVEW 83
+ Y + +K F + F+ AE++F+ +L K LKPD + MI + ++A +
Sbjct: 217 ITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKV 276
Query: 84 FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGM 143
F M G G VT +++ + V ++YD+ + + + D V+++ LIK YG
Sbjct: 277 FSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVSYALLIKAYGR 333
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYIT 203
++ L+V+++M GV+P YN LL A + AK +++ M+R+ I PD +
Sbjct: 334 ARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWS 393
Query: 204 YSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIK 263
Y+T+L AY+ E A ++ +K + + L+ A +++ +E++E ++
Sbjct: 394 YTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMR 453
Query: 264 SSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
SGI + +++ ++++ A EM G P+
Sbjct: 454 LSGI-KANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPD 495
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 102/204 (50%), Gaps = 4/204 (1%)
Query: 5 ETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTF 64
E + + + R I+P ++V Y + +K + + + E A +F+EML ++P + +
Sbjct: 304 EVSKIYDQMQRSDIQP----DVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAY 359
Query: 65 ATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKT 124
+++ + M ++A F+ M PD + T++ AY +++ AE+ + R K
Sbjct: 360 NILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKV 419
Query: 125 ENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLL 184
+ + + VT+ LIK Y D ++ + VY+ M++ G+K N T++ A R +
Sbjct: 420 DGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGS 479
Query: 185 AKLIYEEMKRNGISPDYITYSTLL 208
A Y+EM+ G+ PD + LL
Sbjct: 480 ALGWYKEMESCGVPPDQKAKNVLL 503
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 135/288 (46%), Gaps = 4/288 (1%)
Query: 7 APVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFAT 66
A V L D+ K + +Y++ + ++KK ++E A K+F M+ + + VT+ +
Sbjct: 235 AEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNS 294
Query: 67 MINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTEN 126
+++ + + +++M +PD V+ A +I AY R + A +++
Sbjct: 295 LMS---FETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAG 351
Query: 127 WRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAK 186
R ++ L+ + + +Q V+ M+ + P+L +Y T+L A A A+
Sbjct: 352 VRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAE 411
Query: 187 LIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMC 246
++ +K +G P+ +TY TL++ Y E + +Y +M+ + I + ++
Sbjct: 412 KFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDAS 471
Query: 247 ADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAM 294
A+ +++++S G+ PD+ + L+++ S ++ EA+ +
Sbjct: 472 GRCKNFGSALGWYKEMESCGV-PPDQKAKNVLLSLASTQDELEEAKEL 518
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 110/241 (45%), Gaps = 7/241 (2%)
Query: 127 WRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAK 186
W + F LI YG L +++ V + +G PN+ +Y L+ + R K A+
Sbjct: 142 WNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAE 201
Query: 187 LIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREM---KENRIGVTVDLCNLLL 243
I+ M+ +G P ITY +L+ ++ G ++A ++ + K++ + + ++++
Sbjct: 202 AIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMI 261
Query: 244 SMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGF 303
M G ++A ++F + G+ Q T++SL++ + + +VS+ + ++M S
Sbjct: 262 YMYKKAGNYEKARKVFSSMVGKGVPQST-VTYNSLMSFETSYKEVSK---IYDQMQRSDI 317
Query: 304 KPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPMEELGKL 363
+P++ L+K YG LD G+ P LL+ + M E K
Sbjct: 318 QPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKT 377
Query: 364 I 364
+
Sbjct: 378 V 378
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 95/208 (45%), Gaps = 7/208 (3%)
Query: 102 VIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLG 161
+I AY ++ N + AER+ + ++++AL++ YG + ++ M+ G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 162 VKPNLGTYNTLLPAVYRARKPLLAKLIYEEM---KRNGISPDYITYSTLLRAYIGGYLRE 218
+P+ TY +L K A+ ++E + K++ + PD Y ++ Y E
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 219 DALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSL 278
A ++ M + + N L+S E +I++ ++ S I QPD +++ L
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSLMSFETS---YKEVSKIYDQMQRSDI-QPDVVSYALL 327
Query: 279 ITVYSCFAKVSEAEAMLNEMIESGFKPN 306
I Y + EA ++ EM+++G +P
Sbjct: 328 IKAYGRARREEEALSVFEEMLDAGVRPT 355
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 166/362 (45%), Gaps = 13/362 (3%)
Query: 16 DKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCS 75
+++K L YN+ + + + + A +L D M + L P+ T M++ RLC
Sbjct: 367 EEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVD--RLCK 424
Query: 76 MS--DRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVT 133
D A FE+M C PD +T ++I +V VD A ++Y++ + R +++
Sbjct: 425 SQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIV 484
Query: 134 FSALIKMY---GMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYE 190
+++LIK + G ED + +Y DM P+L NT + +++A +P + ++E
Sbjct: 485 YTSLIKNFFNHGRKEDGHK---IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFE 541
Query: 191 EMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVG 250
E+K PD +YS L+ I + ++ MKE + N+++ G
Sbjct: 542 EIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCG 601
Query: 251 FLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVI 310
+++A ++ E++K+ G ++P T+ S+I + ++ EA + E + N+ +
Sbjct: 602 KVNKAYQLLEEMKTKG-FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIY 660
Query: 311 TPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPMEELGKLIDCIEKA 370
+ L+ +G + G+ P+ + LL+ + K EE+ + + C +
Sbjct: 661 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKA--EEINEALVCFQSM 718
Query: 371 NE 372
E
Sbjct: 719 KE 720
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 142/349 (40%), Gaps = 54/349 (15%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++VLYNV + F K + A K F E+ LKPD VT+ +MI + D AVE F
Sbjct: 237 DIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMF 296
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
E + P T+I Y D A L +R + + + ++ ++ +
Sbjct: 297 EHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKM 356
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
D+ L V+++MK PNL TYN L+ + RA K A + + M++ G+ P+
Sbjct: 357 GKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPN---- 411
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
V N+++ LDEA +FE++
Sbjct: 412 -------------------------------VRTVNIMVDRLCKSQKLDEACAMFEEMDY 440
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXX 324
+ PDE TF SLI +V +A + +M++S + N V T L+K +
Sbjct: 441 K-VCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNF------- 492
Query: 325 XXXXXXXRGLDWGIVPDGHCCCC-LLNIMTKTPMEELGKLIDCIEKANE 372
+ G DGH ++N ++ L +DC+ KA E
Sbjct: 493 ---------FNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGE 532
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 144/326 (44%), Gaps = 40/326 (12%)
Query: 15 RDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMIN----- 69
+D I +L L N M K + E +F+E+ R+ PD +++ +I+
Sbjct: 506 KDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKA 565
Query: 70 --------------------------------CARLCSMSDRAVEWFEKMPGFGCEPDAV 97
C C ++A + E+M G EP V
Sbjct: 566 GFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK--CGKVNKAYQLLEEMKTKGFEPTVV 623
Query: 98 TCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDM 157
T +VI A+++ +D A L++ AK++ L+ V +S+LI +G + D+ + +++
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEEL 683
Query: 158 KVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLR 217
G+ PNL T+N+LL A+ +A + A + ++ MK +P+ +TY L+
Sbjct: 684 MQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKF 743
Query: 218 EDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSS 277
A ++EM++ + + ++S A G + EA +F+ K++G PD + +++
Sbjct: 744 NKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGV-PDSACYNA 802
Query: 278 LITVYSCFAKVSEAEAMLNEMIESGF 303
+I S + +A ++ E G
Sbjct: 803 MIEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 125/263 (47%), Gaps = 2/263 (0%)
Query: 52 MLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVEN 111
M + K +P + T+I + SD + F++M G EP T+I +A+
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 112 VDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNT 171
VD A L D K+ + D V ++ I +G + D + +++ G+KP+ TY +
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278
Query: 172 LLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENR 231
++ + +A + A ++E +++N P Y+T++ Y ++A + +
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 232 IGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEA 291
+V N +L+ +G +DEA+++FE++K P+ ST++ LI + K+ A
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA--APNLSTYNILIDMLCRAGKLDTA 396
Query: 292 EAMLNEMIESGFKPNIFVITPLV 314
+ + M ++G PN+ + +V
Sbjct: 397 FELRDSMQKAGLFPNVRTVNIMV 419
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 130/318 (40%), Gaps = 1/318 (0%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEK 86
++Y +K F E K++ +M+ + PD T ++C ++ FE+
Sbjct: 483 IVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEE 542
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED 146
+ PDA + + +I + + L+ K + LDT ++ +I +
Sbjct: 543 IKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGK 602
Query: 147 YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYST 206
++ + ++MK G +P + TY +++ + + + A +++EE K I + + YS+
Sbjct: 603 VNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSS 662
Query: 207 LLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSG 266
L+ + ++A I E+ + + + N LL ++EA+ F+ +K
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 267 IYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXX 326
P++ T+ LI K ++A EM + G KP+ T ++
Sbjct: 723 C-TPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEA 781
Query: 327 XXXXXRGLDWGIVPDGHC 344
R G VPD C
Sbjct: 782 GALFDRFKANGGVPDSAC 799
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 110/273 (40%), Gaps = 35/273 (12%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
YN+ + F KC A +L +EM + +P VT+ ++I+ D A FE+
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 649
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMA----ERLYDRAKTEN---WR--LDT-------- 131
E + V +++I + +V +D A E L + T N W LD
Sbjct: 650 SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEIN 709
Query: 132 ------------------VTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLL 173
VT+ LI + +++ + +M+ G+KP+ +Y T++
Sbjct: 710 EALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMI 769
Query: 174 PAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIG 233
+ +A A +++ K NG PD Y+ ++ G DA ++ E + +
Sbjct: 770 SGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLP 829
Query: 234 VTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSG 266
+ C +LL L++A + ++ +G
Sbjct: 830 IHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/257 (19%), Positives = 104/257 (40%), Gaps = 36/257 (14%)
Query: 133 TFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEM 192
++++L+ + ++D + +M V G P++ T ++ +A K + + M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 193 KRNGISPDYITYSTLLRAY-------------------------------IGGYLRE--- 218
++ P + Y+TL+ A+ I G+ +E
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 219 -DALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSS 277
AL + EMK + + + L N+ + VG +D A + F +I+++G+ +PDE T++S
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGL-KPDEVTYTS 278
Query: 278 LITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWG 337
+I V ++ EA M + ++ P + ++ YG R G
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 338 IVPDGHCCCCLLNIMTK 354
+P C+L + K
Sbjct: 339 SIPSVIAYNCILTCLRK 355
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 122/263 (46%), Gaps = 1/263 (0%)
Query: 12 RYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCA 71
R L D I+ +V +N + F K AEKL+DEM++R + PD T++++IN
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Query: 72 RLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDT 131
+ D A FE M C P+ VT T+I + + + +D L+ +T
Sbjct: 376 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Query: 132 VTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEE 191
VT++ LI + D D V+ M GV PN+ TYNTLL + + K A +++E
Sbjct: 436 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 495
Query: 192 MKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGF 251
++R+ + P TY+ ++ ED ++ + + V + N ++S G
Sbjct: 496 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGL 555
Query: 252 LDEAVEIFEDIKSSGIYQPDEST 274
+EA +F ++ G PD T
Sbjct: 556 KEEADALFRKMREDGPL-PDSGT 577
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 135/278 (48%), Gaps = 1/278 (0%)
Query: 40 KDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTC 99
K A L D+M++ +PD +TF T+I+ L + + AV ++M GC+P+ VT
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 100 ATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKV 159
V+ + ++D+A L ++ + + V +S +I D LN++ +M+
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 160 LGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLRED 219
GV+PN+ TY++L+ + + A + +M I+P+ +T++ L+ A++ +
Sbjct: 289 KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVE 348
Query: 220 ALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLI 279
A +Y EM + I + + L++ LDEA +FE + S + P+ T+++LI
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTLI 407
Query: 280 TVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ ++ E + EM + G N T L+ +
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 133/289 (46%), Gaps = 1/289 (0%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
+N + K K F+ L ++M + + + T+ +INC S A+ KM
Sbjct: 88 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
G EP VT ++++ Y + + A L D+ +R DT+TF+ LI +
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+ + + D M G +PNL TY ++ + + LA + +M+ I + + YST++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIY 268
+ +DAL ++ EM+ + V + L+S + +A + D+ I
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI- 326
Query: 269 QPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
P+ TF++LI + K+ EAE + +EMI+ P+IF + L+ +
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 143/318 (44%), Gaps = 17/318 (5%)
Query: 4 SETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVT 63
SE +V R ++ +P LV Y V + K D + A L ++M K++ + V
Sbjct: 207 SEAVALVDRMVQRGCQPN----LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 64 FATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAK 123
++T+I+ D A+ F +M G P+ +T +++I E A RL
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 124 TENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPL 183
+ VTF+ALI + + +YD+M + P++ TY++L+ +
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 184 LAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKE-NRIGVTVDLCNLL 242
AK ++E M P+ +TY+TL+ + ++ + ++REM + +G TV L+
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 243 LSMCADVGFL-----DEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNE 297
GF D A +F+ + S G++ P+ T+++L+ K+ +A +
Sbjct: 443 H------GFFQARDCDNAQMVFKQMVSDGVH-PNIMTYNTLLDGLCKNGKLEKAMVVFEY 495
Query: 298 MIESGFKPNIFVITPLVK 315
+ S +P I+ +++
Sbjct: 496 LQRSKMEPTIYTYNIMIE 513
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 122/276 (44%), Gaps = 1/276 (0%)
Query: 42 FEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCAT 101
+ A LF M++ + P F +++ D + EKM G + T
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 102 VIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLG 161
+I + R + +A L + + VT S+L+ Y + + + D M +G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 162 VKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDAL 221
+P+ T+ TL+ ++ K A + + M + G P+ +TY ++ + A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 222 GIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITV 281
+ +M+ +I V + + ++ D+A+ +F ++++ G+ +P+ T+SSLI+
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV-RPNVITYSSLISC 304
Query: 282 YSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ + S+A +L++MIE PN+ L+ +
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAF 340
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 149/310 (48%), Gaps = 6/310 (1%)
Query: 6 TAPVVL-RYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTF 64
TA VV R L I P +V Y + +K + A ++ ++L+R ++P VT+
Sbjct: 374 TASVVYKRMLCQGISPN----VVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTY 429
Query: 65 ATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKT 124
+++I+ C +E M G PD V ++ ++ + A R +
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489
Query: 125 ENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLL 184
++ RL+ V F++LI + L +D+ L V+ M + G+KP++ T+ T++ +
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEE 549
Query: 185 AKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLS 244
A ++ M + G+ PD + Y TL+ A+ L ++ M+ N+I + +CN+++
Sbjct: 550 ALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIH 609
Query: 245 MCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFK 304
+ +++A + F ++ G +PD T++++I Y ++ EAE + + + F
Sbjct: 610 LLFKCHRIEDASKFFNNL-IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFG 668
Query: 305 PNIFVITPLV 314
PN +T L+
Sbjct: 669 PNTVTLTILI 678
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 146/331 (44%), Gaps = 8/331 (2%)
Query: 43 EGAEKLFDEMLQRKLKPDNVTFATMIN--CARLCSMSDRAVEWFEKMPGFGCEPDAVTCA 100
E A +L +L P+ VTF T+IN C R DRA + F+ M G EPD + +
Sbjct: 268 EVASRLLSLVLDCGPAPNVVTFCTLINGFCKR--GEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 101 TVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVL 160
T+I Y + + M +L+ +A + +LD V FS+ I +Y D VY M
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 161 GVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIG-GYLRED 219
G+ PN+ TY L+ + + + A +Y ++ + G+ P +TYS+L+ + G LR
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS- 444
Query: 220 ALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLI 279
+Y +M + V + +L+ + G + A+ + I + + F+SLI
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSI-RLNVVVFNSLI 503
Query: 280 TVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIV 339
+ + EA + M G KP++ T +++ R G+
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLE 563
Query: 340 PDGHCCCCLLNIMTKTPMEELG-KLIDCIEK 369
PD C L++ K +G +L D +++
Sbjct: 564 PDALAYCTLIDAFCKHMKPTIGLQLFDLMQR 594
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 131/284 (46%), Gaps = 5/284 (1%)
Query: 36 FKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPD 95
F K + + A LF M QR ++PD + ++T+I+ M + F + G + D
Sbjct: 296 FCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLD 355
Query: 96 AVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED--YDQCLNV 153
V ++ I Y + ++ A +Y R + + VT++ LIK G+ +D + +
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIK--GLCQDGRIYEAFGM 413
Query: 154 YDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIG 213
Y + G++P++ TY++L+ + +YE+M + G PD + Y L+
Sbjct: 414 YGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK 473
Query: 214 GYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDES 273
L A+ +M I + V + N L+ + DEA+++F + GI +PD +
Sbjct: 474 QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI-KPDVA 532
Query: 274 TFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
TF++++ V ++ EA + M + G +P+ L+ +
Sbjct: 533 TFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAF 576
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 109/226 (48%), Gaps = 1/226 (0%)
Query: 47 KLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAY 106
+LFD M + K+ D +I+ C + A ++F + EPD VT T+I Y
Sbjct: 587 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY 646
Query: 107 ARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNL 166
+ +D AER+++ K + +TVT + LI + D D + ++ M G KPN
Sbjct: 647 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 706
Query: 167 GTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYRE 226
TY L+ ++ + ++EEM+ GISP ++YS ++ ++A I+ +
Sbjct: 707 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 766
Query: 227 MKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDE 272
+ ++ V +L+ VG L EA ++E + +G+ +PD+
Sbjct: 767 AIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV-KPDD 811
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 121/289 (41%), Gaps = 5/289 (1%)
Query: 18 IKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMS 77
IKP ++ + M+V E A LF M + L+PD + + T+I+
Sbjct: 527 IKP----DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKP 582
Query: 78 DRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSAL 137
++ F+ M D C VI + ++ A + ++ D VT++ +
Sbjct: 583 TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTM 642
Query: 138 IKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGI 197
I Y L D+ +++ +KV PN T L+ + + A ++ M G
Sbjct: 643 ICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS 702
Query: 198 SPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVE 257
P+ +TY L+ + E + ++ EM+E I ++ ++++ G +DEA
Sbjct: 703 KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATN 762
Query: 258 IFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
IF + + PD ++ LI Y ++ EA + M+ +G KP+
Sbjct: 763 IFHQAIDAKLL-PDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 96/223 (43%), Gaps = 43/223 (19%)
Query: 15 RDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLC 74
R+KI ++ + NV + + KC E A K F+ +++ K++PD VT+ TMI C C
Sbjct: 594 RNKISA----DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI-CG-YC 647
Query: 75 SMS-------------------------------------DRAVEWFEKMPGFGCEPDAV 97
S+ D A+ F M G +P+AV
Sbjct: 648 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 707
Query: 98 TCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDM 157
T ++ +++ +++ + +L++ + + V++S +I D+ N++
Sbjct: 708 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 767
Query: 158 KVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPD 200
+ P++ Y L+ + + + A L+YE M RNG+ PD
Sbjct: 768 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 145/271 (53%), Gaps = 1/271 (0%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIF 104
A +L +M++RK+ PD TF+ +I+ A + +++M +P VT +++I
Sbjct: 310 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 369
Query: 105 AYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKP 164
+ + +D A+++++ +++ D VT++ LIK + + ++ + V+ +M G+
Sbjct: 370 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 429
Query: 165 NLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIY 224
N TYN L+ +++A +A+ I++EM +G+ P+ +TY+TLL E A+ ++
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 489
Query: 225 REMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSC 284
++ +++ T+ N+++ G +++ ++F ++ G+ +PD ++++I+ +
Sbjct: 490 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV-KPDVVAYNTMISGFCR 548
Query: 285 FAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
EA+A+ EM E G PN L++
Sbjct: 549 KGSKEEADALFKEMKEDGTLPNSGCYNTLIR 579
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 136/292 (46%), Gaps = 1/292 (0%)
Query: 12 RYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCA 71
R L D I+ ++ ++ + F K AEKL+DEM++R + P VT++++IN
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
Query: 72 RLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDT 131
+ D A + FE M C PD VT T+I + + + V+ ++ +T
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431
Query: 132 VTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEE 191
VT++ LI+ D D ++ +M GV PN+ TYNTLL + + K A +++E
Sbjct: 432 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 491
Query: 192 MKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGF 251
++R+ + P TY+ ++ ED ++ + + V N ++S G
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 551
Query: 252 LDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGF 303
+EA +F+++K G P+ +++LI + ++ EM GF
Sbjct: 552 KEEADALFKEMKEDGTL-PNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 602
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 144/308 (46%), Gaps = 1/308 (0%)
Query: 8 PVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATM 67
P+ L L +K +V + + + K A L D+M +P+ VTF T+
Sbjct: 133 PLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTL 192
Query: 68 INCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENW 127
I+ L + + A+ ++M GC+PD VT V+ + + D+A L ++ +
Sbjct: 193 IHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKL 252
Query: 128 RLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKL 187
+ ++ +I + D LN++ +M+ G++PN+ TY++L+ + + A
Sbjct: 253 EPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR 312
Query: 188 IYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCA 247
+ +M I+PD T+S L+ A++ +A +Y EM + I ++ + L++
Sbjct: 313 LLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 372
Query: 248 DVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNI 307
LDEA ++FE + S + PD T+++LI + + +V E + EM + G N
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431
Query: 308 FVITPLVK 315
L++
Sbjct: 432 VTYNILIQ 439
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 134/276 (48%), Gaps = 1/276 (0%)
Query: 42 FEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCAT 101
+ A LF EM++ + P + F+ +++ + D + E+M G + T +
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 102 VIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLG 161
+I + R + +A + + + + VT S+L+ Y + + + + D M V G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 162 VKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDAL 221
+PN T+NTL+ ++ K A + + M G PD +TY ++ + A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 222 GIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITV 281
+ +M++ ++ V + N ++ +D+A+ +F+++++ GI +P+ T+SSLI+
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI-RPNVVTYSSLISC 300
Query: 282 YSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ + S+A +L++MIE P++F + L+ +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 336
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 137/292 (46%), Gaps = 1/292 (0%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
++ ++ + K F+ L ++M + ++ T++ +INC S A+
Sbjct: 81 IIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLG 140
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
KM G EP+ VT ++++ Y + + A L D+ ++ +TVTF+ LI +
Sbjct: 141 KMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHN 200
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
+ + + D M G +P+L TY ++ + + LA + +M++ + P + Y+
Sbjct: 201 KASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYN 260
Query: 206 TLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSS 265
T++ +DAL +++EM+ I V + L+S + G +A + D+
Sbjct: 261 TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320
Query: 266 GIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
I PD TFS+LI + K+ EAE + +EM++ P+I + L+ +
Sbjct: 321 KI-NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 110/231 (47%), Gaps = 1/231 (0%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++V YN +K F K K E ++F EM QR L + VT+ +I D A E F
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
++M G P+ +T T++ + ++ A +++ + T++ +I+
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 514
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
+ +++ ++ + GVKP++ YNT++ R A +++EMK +G P+ Y
Sbjct: 515 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCY 574
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEA 255
+TL+RA + RE + + +EM+ L+ +M D G LD++
Sbjct: 575 NTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD-GRLDKS 624
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 144/292 (49%), Gaps = 1/292 (0%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
++ YN+ + F ++ KL +M++RK+ P+ VTF+ +I+ A E +
Sbjct: 298 IITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHK 357
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
+M G PD +T ++I + + ++D A ++ D ++ + TF+ LI Y
Sbjct: 358 EMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN 417
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
D L ++ M + GV + TYNTL+ K +AK +++EM + P+ +TY
Sbjct: 418 RIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYK 477
Query: 206 TLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSS 265
LL E AL I+ +++++++ + + + N+++ + +D+A ++F +
Sbjct: 478 ILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 537
Query: 266 GIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
G+ +P T++ +I +SEAE + +M E G P+ + L++ +
Sbjct: 538 GV-KPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAH 588
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 134/302 (44%), Gaps = 44/302 (14%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIF 104
A +L D M++ KPD +T T++N L A+ +KM +GC+P+AVT V+
Sbjct: 177 ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 236
Query: 105 AYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKP 164
+ +A L + + N +LD V +S +I D N++++M++ G+
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT 296
Query: 165 NLGTYNTLLPAVYRARK-----PLLAKLI------------------------------Y 189
N+ TYN L+ A + LL +I +
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356
Query: 190 EEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVD----LCNLLLSM 245
+EM GI+PD ITY++L I G+ +E+ L +M + + D N+L++
Sbjct: 357 KEMIHRGIAPDTITYTSL----IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILING 412
Query: 246 CADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKP 305
+D+ +E+F + G+ D T+++LI + K++ A+ + EM+ P
Sbjct: 413 YCKANRIDDGLELFRKMSLRGVV-ADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP 471
Query: 306 NI 307
NI
Sbjct: 472 NI 473
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 138/303 (45%), Gaps = 1/303 (0%)
Query: 12 RYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCA 71
+ LRD IK +V ++V + F K AE+L EM+ R + PD +T+ ++I+
Sbjct: 319 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Query: 72 RLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDT 131
+ D+A + + M GC+P+ T +I Y + +D L+ + DT
Sbjct: 379 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 438
Query: 132 VTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEE 191
VT++ LI+ + L + ++ +M V PN+ TY LL + + A I+E+
Sbjct: 439 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 498
Query: 192 MKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGF 251
++++ + D Y+ ++ +DA ++ + + V N+++ G
Sbjct: 499 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGP 558
Query: 252 LDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVIT 311
L EA +F ++ G + PD T++ LI + +++ ++ E+ GF + I
Sbjct: 559 LSEAELLFRKMEEDG-HAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIK 617
Query: 312 PLV 314
++
Sbjct: 618 MVI 620
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 126/301 (41%), Gaps = 1/301 (0%)
Query: 14 LRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARL 73
RD I ++ ++ K K ++ L +M + + + T + MINC
Sbjct: 76 FRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCR 135
Query: 74 CSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVT 133
C A K+ G EP+ +T +T+I V A L DR + D +T
Sbjct: 136 CRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLIT 195
Query: 134 FSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMK 193
+ L+ + + + + D M G +PN TY +L + ++ + LA + +M+
Sbjct: 196 INTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 194 RNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLD 253
I D + YS ++ ++A ++ EM+ I + N+L+ + G D
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWD 315
Query: 254 EAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPL 313
+ ++ D+ I P+ TFS LI + K+ EAE + EMI G P+ T L
Sbjct: 316 DGAKLLRDMIKRKI-NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Query: 314 V 314
+
Sbjct: 375 I 375
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 126/299 (42%), Gaps = 1/299 (0%)
Query: 43 EGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATV 102
+ A LF +M+ + P + F+ + + D + ++M G + T + +
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 103 IFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGV 162
I + R + +A + + +T+TFS LI + + L + D M +G
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 163 KPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALG 222
KP+L T NTL+ + + K A L+ ++M G P+ +TY +L A+
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 223 IYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVY 282
+ R+M+E I + ++++ G LD A +F +++ GI + T++ LI +
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGI-TTNIITYNILIGGF 308
Query: 283 SCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPD 341
+ + +L +MI+ PN+ + L+ + + GI PD
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 127/288 (44%), Gaps = 1/288 (0%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEK 86
V YN ++VF K + A + EM + D+VT+ ++ S A E
Sbjct: 317 VTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEM 376
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED 146
M G P+A+T TVI AY + D A +L+ K +T T++A++ + G
Sbjct: 377 MTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSR 436
Query: 147 YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYST 206
++ + + DMK G PN T+NT+L ++ EMK G PD T++T
Sbjct: 437 SNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNT 496
Query: 207 LLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSG 266
L+ AY DA +Y EM V N LL+ A G + D+KS G
Sbjct: 497 LISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKG 556
Query: 267 IYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
++P E+++S ++ Y+ E + N + E P+ ++ L+
Sbjct: 557 -FKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLL 603
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 141/293 (48%), Gaps = 6/293 (2%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAV-EWFEKM 87
Y + + + +E A LF+ M + P VT+ +++ S R + ++M
Sbjct: 213 YTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEM 272
Query: 88 PGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDY 147
G + D TC+TV+ A AR + A+ + K+ + TVT++AL++++G Y
Sbjct: 273 RSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVY 332
Query: 148 DQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTL 207
+ L+V +M+ + TYN L+ A RA A + E M + G+ P+ ITY+T+
Sbjct: 333 TEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTV 392
Query: 208 LRAYIGGYLREDALGIYREMKENRIGVTVDLC--NLLLSMCADVGFLDEAVEIFEDIKSS 265
+ AY ++AL ++ MKE G + C N +LS+ +E +++ D+KS+
Sbjct: 393 IDAYGKAGKEDEALKLFYSMKE--AGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSN 450
Query: 266 GIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
G P+ +T+++++ + + EM GF+P+ L+ YG
Sbjct: 451 GC-SPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYG 502
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 125/271 (46%), Gaps = 1/271 (0%)
Query: 47 KLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAY 106
++F EM +PD TF T+I+ C A + + +M G T ++ A
Sbjct: 477 RVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNAL 536
Query: 107 ARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNL 166
AR + E + K++ ++ ++S +++ Y +Y + + +K + P+
Sbjct: 537 ARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSW 596
Query: 167 GTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYRE 226
TLL A ++ R ++ + K++G PD + ++++L + + + A GI
Sbjct: 597 MLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILES 656
Query: 227 MKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFA 286
++E+ + + N L+ M G +A EI + ++ S + +PD +++++I +
Sbjct: 657 IREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQL-KPDLVSYNTVIKGFCRRG 715
Query: 287 KVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ EA ML+EM E G +P IF V Y
Sbjct: 716 LMQEAVRMLSEMTERGIRPCIFTYNTFVSGY 746
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 124/267 (46%), Gaps = 3/267 (1%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
+ YN + + D+ E + +M + KP +++ M+ C + +E E
Sbjct: 526 VTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGG-NYLGIERIE 584
Query: 86 KMPGFG-CEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
G P + T++ A + + +ER + K ++ D V F++++ ++
Sbjct: 585 NRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRN 644
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
YDQ + + ++ G+ P+L TYN+L+ R + A+ I + ++++ + PD ++Y
Sbjct: 645 NMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSY 704
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
+T+++ + L ++A+ + EM E I + N +S +G E ++ E +
Sbjct: 705 NTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAK 764
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEA 291
+ +P+E TF ++ Y K SEA
Sbjct: 765 NDC-RPNELTFKMVVDGYCRAGKYSEA 790
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 132/332 (39%), Gaps = 43/332 (12%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEW 83
KE+VL N ++ + G + FD + L+ D V+ ++ + + EW
Sbjct: 107 KEVVLVNSIVE-----QPLTGLSRFFDSVKSELLRTDLVSLVKGLDDSGHWERAVFLFEW 161
Query: 84 FEKMPGFGC-EPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG 142
G + D + R +A +L D+ + + LD ++ ++ Y
Sbjct: 162 LVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYS 221
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYR------------------------ 178
Y++ +++++ MK +G P L TYN +L +
Sbjct: 222 RTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDE 281
Query: 179 ----------ARKPLL--AKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYRE 226
AR+ LL AK + E+K G P +TY+ LL+ + + +AL + +E
Sbjct: 282 FTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKE 341
Query: 227 MKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFA 286
M+EN N L++ GF EA + E + G+ P+ T++++I Y
Sbjct: 342 MEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGV-MPNAITYTTVIDAYGKAG 400
Query: 287 KVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
K EA + M E+G PN ++ G
Sbjct: 401 KEDEALKLFYSMKEAGCVPNTCTYNAVLSLLG 432
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 146/331 (44%), Gaps = 4/331 (1%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEK 86
V+YNV + K D KL D M + P+ VT+ T+I+ L D+AV E+
Sbjct: 258 VIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLER 317
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED 146
M C P+ VT T+I + A RL + + L+ +S LI
Sbjct: 318 MVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGK 377
Query: 147 YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYST 206
++ ++++ M G KPN+ Y+ L+ + R KP AK I M +G P+ TYS+
Sbjct: 378 AEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSS 437
Query: 207 LLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSG 266
L++ + L E+A+ +++EM + ++L+ VG + EA+ ++ + + G
Sbjct: 438 LMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIG 497
Query: 267 IYQPDESTFSSLITVYSCFAKVSEAEAMLNEMI---ESGFKPNIFVITPLVKCYGXXXXX 323
I +PD +SS+I + A + +EM+ E +P++ L+
Sbjct: 498 I-KPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDI 556
Query: 324 XXXXXXXXRGLDWGIVPDGHCCCCLLNIMTK 354
LD G PD C LN +++
Sbjct: 557 SRAVDLLNSMLDRGCDPDVITCNTFLNTLSE 587
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 126/278 (45%), Gaps = 1/278 (0%)
Query: 40 KDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTC 99
+ E + + + + + P+ ++F +I DRA+E F MP C PD T
Sbjct: 166 RGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTY 225
Query: 100 ATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKV 159
T++ + E +D A L D ++E V ++ LI D + + D+M +
Sbjct: 226 CTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFL 285
Query: 160 LGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLRED 219
G PN TYNTL+ + K A + E M + P+ +TY TL+ + D
Sbjct: 286 KGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATD 345
Query: 220 ALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLI 279
A+ + M+E + + ++L+S G +EA+ ++ + G +P+ +S L+
Sbjct: 346 AVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGC-KPNIVVYSVLV 404
Query: 280 TVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
K +EA+ +LN MI SG PN + + L+K +
Sbjct: 405 DGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGF 442
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 135/315 (42%), Gaps = 5/315 (1%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMS--DRAVEWFEK 86
+N+ +K K + + A ++F M +RK PD T+ T+++ LC D AV ++
Sbjct: 190 FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMD--GLCKEERIDEAVLLLDE 247
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED 146
M GC P V +I + ++ +L D + + VT++ LI +
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 307
Query: 147 YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYST 206
D+ +++ + M PN TY TL+ + + R+ A + M+ G + YS
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSV 367
Query: 207 LLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSG 266
L+ E+A+ ++R+M E + + ++L+ G +EA EI + +SG
Sbjct: 368 LISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427
Query: 267 IYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXX 326
P+ T+SSL+ + EA + EM ++G N F + L+
Sbjct: 428 CL-PNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEA 486
Query: 327 XXXXXRGLDWGIVPD 341
+ L GI PD
Sbjct: 487 MMVWSKMLTIGIKPD 501
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 103/226 (45%), Gaps = 14/226 (6%)
Query: 98 TCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDM 157
T +++I +YA + D E+L R + EN + +F + + YG D+ ++++ M
Sbjct: 79 TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRM 138
Query: 158 -KVLGVKPNLGTYNTLLPAV-----YRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAY 211
K ++ ++N++L + Y ++ M N ISP+ ++++ +++A
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMN-ISPNGLSFNLVIKAL 197
Query: 212 IGGYLREDALGIYREMKENRI---GVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIY 268
+ A+ ++R M E + G T C L+ +C + +DEAV + ++++S G
Sbjct: 198 CKLRFVDRAIEVFRGMPERKCLPDGYT--YCTLMDGLCKE-ERIDEAVLLLDEMQSEGC- 253
Query: 269 QPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
P ++ LI ++ +++ M G PN L+
Sbjct: 254 SPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLI 299
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 132/270 (48%), Gaps = 9/270 (3%)
Query: 41 DFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCA 100
D A +F E+ + L PD V + TMI+ +D+A ++F + G P T
Sbjct: 388 DMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTST 447
Query: 101 TVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVL 160
+I A +R ++ AE ++ KTE +LD VT++ L+ YG ++ + D+M+
Sbjct: 448 ILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSA 507
Query: 161 GVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLR--- 217
G+ P++ TYN L+ ++ A I E+ R G P + ++ + IGG+ +
Sbjct: 508 GISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDV----IGGFSKRGD 563
Query: 218 -EDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFS 276
++A ++ M + R+ V C+ LL +++A+ +F + +G+ +PD ++
Sbjct: 564 FQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGL-KPDVVLYN 622
Query: 277 SLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
+LI Y + +A ++ M++ G PN
Sbjct: 623 TLIHGYCSVGDIEKACELIGLMVQRGMLPN 652
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 131/271 (48%), Gaps = 19/271 (7%)
Query: 56 KLKPDNVTFATMINCARLCSMSD--RAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVD 113
+L+P+ +++ + + +CS D RA F+++ G PD V T+I Y + D
Sbjct: 368 RLRPNIFVYSSFL--SNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTD 425
Query: 114 MAERLYDRAKTENWRLDTVTFSALI----KMYGMLEDYDQCLNVYDDMKVLGVKPNLGTY 169
A + Y A ++ ++T S ++ +G + D + +V+ +MK G+K ++ TY
Sbjct: 426 KAFQ-YFGALLKSGNPPSLTTSTILIGACSRFGSISDAE---SVFRNMKTEGLKLDVVTY 481
Query: 170 NTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYI-GGYLREDALGIYREMK 228
N L+ + + + +EM+ GISPD TY+ L+ + + GY+ E I ++
Sbjct: 482 NNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIR 541
Query: 229 ENRIGVTVDLCNLLLSMCADVGFLDEAVEIF--EDIKSSGIYQPDESTFSSLITVYSCFA 286
+ T+ +++ F + + F D++ +PD T S+L+ Y
Sbjct: 542 RGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLR----MKPDVVTCSALLHGYCKAQ 597
Query: 287 KVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
++ +A + N+++++G KP++ + L+ Y
Sbjct: 598 RMEKAIVLFNKLLDAGLKPDVVLYNTLIHGY 628
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 123/283 (43%), Gaps = 11/283 (3%)
Query: 37 KKCKDFEGA-----EKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFG 91
KKC E + + LF+ + R++ F+ +I+C + A++ K+ FG
Sbjct: 174 KKCSGEERSLCLVMKDLFETRIDRRVL--ETVFSILIDCCIRERKVNMALKLTYKVDQFG 231
Query: 92 CEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCL 151
P C +++ RV +++A + + L+ S I+ Y +D+
Sbjct: 232 IFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGW 291
Query: 152 NVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAY 211
+ MK G++P++ + + + +A A + ++K GIS D ++ S+++ +
Sbjct: 292 ELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGF 351
Query: 212 IGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPD 271
E+A+ + R+ + + + LS G + A IF++I G+ PD
Sbjct: 352 CKVGKPEEAIKLIHSF---RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLL-PD 407
Query: 272 ESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
++++I Y + +A +++SG P++ T L+
Sbjct: 408 CVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILI 450
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 137/364 (37%), Gaps = 56/364 (15%)
Query: 18 IKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCS-- 75
I P+RG + L ++V E A + + ML R + + I + CS
Sbjct: 232 IFPSRGVCISLLKEILRV----HGLELAREFVEHMLSRGRHLNAAVLSLFIR--KYCSDG 285
Query: 76 MSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFS 135
D+ E M +G PD V I + + A + + K D+V+ S
Sbjct: 286 YFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVS 345
Query: 136 ALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRN 195
++I + + ++ + + ++ +PN+ Y++ L + L A I++E+
Sbjct: 346 SVIDGFCKVGKPEEAIKLIHSFRL---RPNIFVYSSFLSNICSTGDMLRASTIFQEIFEL 402
Query: 196 GISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEA 255
G+ PD + Y+T++ Y CNL G D+A
Sbjct: 403 GLLPDCVCYTTMIDGY---------------------------CNL--------GRTDKA 427
Query: 256 VEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
+ F + SG P +T + LI S F +S+AE++ M G K ++ L+
Sbjct: 428 FQYFGALLKSG-NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH 486
Query: 316 CYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPMEELGKLIDCIEKANEELG 375
YG GI PD NI+ + + I++ANE +
Sbjct: 487 GYGKTHQLNKVFELIDEMRSAGISPD----VATYNILIHSMVVR-----GYIDEANEIIS 537
Query: 376 SVVR 379
++R
Sbjct: 538 ELIR 541
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 79/184 (42%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++V YN M + K +L DEM + PD T+ +I+ + D A E
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
++ G P + VI +++ + A L+ + D VT SAL+ Y
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
+ ++ + +++ + G+KP++ YNTL+ A + M + G+ P+ T+
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTH 656
Query: 205 STLL 208
L+
Sbjct: 657 HALV 660
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 132/270 (48%), Gaps = 9/270 (3%)
Query: 41 DFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCA 100
D A +F E+ + L PD V + TMI+ +D+A ++F + G P T
Sbjct: 388 DMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTST 447
Query: 101 TVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVL 160
+I A +R ++ AE ++ KTE +LD VT++ L+ YG ++ + D+M+
Sbjct: 448 ILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSA 507
Query: 161 GVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLR--- 217
G+ P++ TYN L+ ++ A I E+ R G P + ++ + IGG+ +
Sbjct: 508 GISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDV----IGGFSKRGD 563
Query: 218 -EDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFS 276
++A ++ M + R+ V C+ LL +++A+ +F + +G+ +PD ++
Sbjct: 564 FQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGL-KPDVVLYN 622
Query: 277 SLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
+LI Y + +A ++ M++ G PN
Sbjct: 623 TLIHGYCSVGDIEKACELIGLMVQRGMLPN 652
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 131/271 (48%), Gaps = 19/271 (7%)
Query: 56 KLKPDNVTFATMINCARLCSMSD--RAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVD 113
+L+P+ +++ + + +CS D RA F+++ G PD V T+I Y + D
Sbjct: 368 RLRPNIFVYSSFL--SNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTD 425
Query: 114 MAERLYDRAKTENWRLDTVTFSALI----KMYGMLEDYDQCLNVYDDMKVLGVKPNLGTY 169
A + Y A ++ ++T S ++ +G + D + +V+ +MK G+K ++ TY
Sbjct: 426 KAFQ-YFGALLKSGNPPSLTTSTILIGACSRFGSISDAE---SVFRNMKTEGLKLDVVTY 481
Query: 170 NTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYI-GGYLREDALGIYREMK 228
N L+ + + + +EM+ GISPD TY+ L+ + + GY+ E I ++
Sbjct: 482 NNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIR 541
Query: 229 ENRIGVTVDLCNLLLSMCADVGFLDEAVEIF--EDIKSSGIYQPDESTFSSLITVYSCFA 286
+ T+ +++ F + + F D++ +PD T S+L+ Y
Sbjct: 542 RGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLR----MKPDVVTCSALLHGYCKAQ 597
Query: 287 KVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
++ +A + N+++++G KP++ + L+ Y
Sbjct: 598 RMEKAIVLFNKLLDAGLKPDVVLYNTLIHGY 628
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 123/283 (43%), Gaps = 11/283 (3%)
Query: 37 KKCKDFEGA-----EKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFG 91
KKC E + + LF+ + R++ F+ +I+C + A++ K+ FG
Sbjct: 174 KKCSGEERSLCLVMKDLFETRIDRRVL--ETVFSILIDCCIRERKVNMALKLTYKVDQFG 231
Query: 92 CEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCL 151
P C +++ RV +++A + + L+ S I+ Y +D+
Sbjct: 232 IFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGW 291
Query: 152 NVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAY 211
+ MK G++P++ + + + +A A + ++K GIS D ++ S+++ +
Sbjct: 292 ELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGF 351
Query: 212 IGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPD 271
E+A+ + R+ + + + LS G + A IF++I G+ PD
Sbjct: 352 CKVGKPEEAIKLIHSF---RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLL-PD 407
Query: 272 ESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
++++I Y + +A +++SG P++ T L+
Sbjct: 408 CVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILI 450
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 137/364 (37%), Gaps = 56/364 (15%)
Query: 18 IKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCS-- 75
I P+RG + L ++V E A + + ML R + + I + CS
Sbjct: 232 IFPSRGVCISLLKEILRV----HGLELAREFVEHMLSRGRHLNAAVLSLFIR--KYCSDG 285
Query: 76 MSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFS 135
D+ E M +G PD V I + + A + + K D+V+ S
Sbjct: 286 YFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVS 345
Query: 136 ALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRN 195
++I + + ++ + + ++ +PN+ Y++ L + L A I++E+
Sbjct: 346 SVIDGFCKVGKPEEAIKLIHSFRL---RPNIFVYSSFLSNICSTGDMLRASTIFQEIFEL 402
Query: 196 GISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEA 255
G+ PD + Y+T++ Y CNL G D+A
Sbjct: 403 GLLPDCVCYTTMIDGY---------------------------CNL--------GRTDKA 427
Query: 256 VEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
+ F + SG P +T + LI S F +S+AE++ M G K ++ L+
Sbjct: 428 FQYFGALLKSG-NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH 486
Query: 316 CYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPMEELGKLIDCIEKANEELG 375
YG GI PD NI+ + + I++ANE +
Sbjct: 487 GYGKTHQLNKVFELIDEMRSAGISPD----VATYNILIHSMVVR-----GYIDEANEIIS 537
Query: 376 SVVR 379
++R
Sbjct: 538 ELIR 541
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 79/184 (42%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++V YN M + K +L DEM + PD T+ +I+ + D A E
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
++ G P + VI +++ + A L+ + D VT SAL+ Y
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
+ ++ + +++ + G+KP++ YNTL+ A + M + G+ P+ T+
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTH 656
Query: 205 STLL 208
L+
Sbjct: 657 HALV 660
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 132/304 (43%), Gaps = 1/304 (0%)
Query: 38 KCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAV 97
K +E LF + + D +F T+I+C C+ A+ KM G EP V
Sbjct: 91 KLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIV 150
Query: 98 TCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDM 157
T +++ + V A L D+ + + V ++ +I + L+V M
Sbjct: 151 TFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHM 210
Query: 158 KVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLR 217
K +G++P++ TYN+L+ ++ + ++ I +M R GISPD IT+S L+ Y
Sbjct: 211 KKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQL 270
Query: 218 EDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSS 277
+A Y EM + + + N L++ G LDEA ++ + S G + P+ T+++
Sbjct: 271 LEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFF-PNAVTYNT 329
Query: 278 LITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWG 337
LI Y +V + +L M G + F L + Y R + G
Sbjct: 330 LINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCG 389
Query: 338 IVPD 341
+ PD
Sbjct: 390 VHPD 393
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 127/290 (43%), Gaps = 1/290 (0%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+L + + F +C A +M++ +P VTF +++N + A+
Sbjct: 113 DLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLV 172
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
+++ G G EP+ V T+I + V+ A + K R D VT+++LI
Sbjct: 173 DQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHS 232
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
+ + DM +G+ P++ T++ L+ + + L AK Y EM + ++P+ +TY
Sbjct: 233 GTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTY 292
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
++L+ L ++A + + N L++ +D+ ++I +
Sbjct: 293 NSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSR 352
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
G+ D T+++L Y K S AE +L M+ G P+++ L+
Sbjct: 353 DGV-DGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILL 401
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 126/279 (45%), Gaps = 7/279 (2%)
Query: 42 FEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCAT 101
F A LF +M + P V F+ ++ + + + F + G D + T
Sbjct: 60 FNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTT 119
Query: 102 VIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLG 161
+I + R + +A + + VTF +L+ + + + + +++ D + LG
Sbjct: 120 LIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLG 179
Query: 162 VKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL-RAYIGGYLREDA 220
+PN+ YNT++ ++ + A + + MK+ GI PD +TY++L+ R + G A
Sbjct: 180 YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSA 239
Query: 221 LGIYREMKENRIGVTVDLCNL--LLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSL 278
+ M R+G++ D+ L+ + G L EA + + ++ + P+ T++SL
Sbjct: 240 RILSDMM---RMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSV-NPNIVTYNSL 295
Query: 279 ITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
I + EA+ +LN ++ GF PN L+ Y
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGY 334
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 102/218 (46%)
Query: 3 NSETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNV 62
+S T V R L D ++ +++ ++ + V+ K A+K ++EM+QR + P+ V
Sbjct: 231 HSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIV 290
Query: 63 TFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRA 122
T+ ++IN + + D A + + G P+AVT T+I Y + + VD ++
Sbjct: 291 TYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVM 350
Query: 123 KTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKP 182
+ DT T++ L + Y + V M GV P++ T+N LL + K
Sbjct: 351 SRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKI 410
Query: 183 LLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDA 220
A + E+++++ ITY+ +++ EDA
Sbjct: 411 GKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDA 448
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 141/306 (46%), Gaps = 9/306 (2%)
Query: 3 NSETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNV 62
NS R L D IK ++ Y+ + F K A++LF+EM++ + PD V
Sbjct: 237 NSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV 296
Query: 63 TFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRA 122
T++++IN L D A + F+ M GC D V+ T+I + + + V+ +L+
Sbjct: 297 TYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM 356
Query: 123 KTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKP 182
+TVT++ LI+ + D D+ + M G+ P++ TYN LL + +
Sbjct: 357 SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGEL 416
Query: 183 LLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLL 242
A +I+E+M++ + D +TY+T++R E+A ++ + + + +
Sbjct: 417 EKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTM 476
Query: 243 LSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESG 302
+S G L E ++ +K G+ + D + IT+ + ++ +M+ G
Sbjct: 477 MSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITL---------SAELIKKMLSCG 527
Query: 303 FKPNIF 308
+ P++
Sbjct: 528 YAPSLL 533
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 152/362 (41%), Gaps = 75/362 (20%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMIN--CARLCSMSDRAVE 82
+L +N+ + F C A + +ML+ +PD VT +++N C R +SD AV
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRR-NRVSD-AVS 176
Query: 83 WFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG 142
+KM G +PD V +I + + + V+ A + + + R + VT++AL+
Sbjct: 177 LVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC 236
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
+ + DM + PN+ TY+ LL A + K L AK ++EEM R I PD +
Sbjct: 237 NSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV 296
Query: 203 TYSTLLRAY-------------------------------IGGYLR----EDALGIYREM 227
TYS+L+ I G+ + ED + ++REM
Sbjct: 297 TYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM 356
Query: 228 KENRI---------------------------------GVTVDLC--NLLLSMCADVGFL 252
+ + G++ D+ N+LL D G L
Sbjct: 357 SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGEL 416
Query: 253 DEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITP 312
++A+ IFED++ + D T++++I KV EA ++ + G KP+I T
Sbjct: 417 EKALVIFEDMQKREM-DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 475
Query: 313 LV 314
++
Sbjct: 476 MM 477
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 140/305 (45%), Gaps = 7/305 (2%)
Query: 16 DKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCS 75
D +K +V +N + K K ++ L +M ++ D TF +INC C
Sbjct: 75 DMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCF 134
Query: 76 MSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFS 135
A+ KM G EPD VT +++ + R V A L D+ ++ D V ++
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYN 194
Query: 136 ALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRN 195
A+I + + + + +++ G++PN+ TY L+ + + + A + +M +
Sbjct: 195 AIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK 254
Query: 196 GISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLC---NLLLSMCADVGFL 252
I+P+ ITYS LL A++ +A ++ EM R+ + D+ +L+ +C +
Sbjct: 255 KITPNVITYSALLDAFVKNGKVLEAKELFEEMV--RMSIDPDIVTYSSLINGLCLH-DRI 311
Query: 253 DEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITP 312
DEA ++F+ + S G D ++++LI + +V + + EM + G N
Sbjct: 312 DEANQMFDLMVSKGCL-ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 313 LVKCY 317
L++ +
Sbjct: 371 LIQGF 375
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 132/304 (43%), Gaps = 15/304 (4%)
Query: 14 LRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARL 73
LR+++ TR +++ L + A LF +M++ + P V F +++
Sbjct: 52 LRERLSKTRLRDIKLND--------------AIDLFSDMVKSRPFPSIVDFNRLLSAIVK 97
Query: 74 CSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVT 133
D + +KM G D T VI + V +A + + + D VT
Sbjct: 98 LKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVT 157
Query: 134 FSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMK 193
+L+ + +++ D M +G KP++ YN ++ ++ + ++ A ++E++
Sbjct: 158 IGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIE 217
Query: 194 RNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLD 253
R GI P+ +TY+ L+ DA + +M + +I V + LL G +
Sbjct: 218 RKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVL 277
Query: 254 EAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPL 313
EA E+FE++ I PD T+SSLI ++ EA M + M+ G ++ L
Sbjct: 278 EAKELFEEMVRMSI-DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTL 336
Query: 314 VKCY 317
+ +
Sbjct: 337 INGF 340
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 127/278 (45%), Gaps = 3/278 (1%)
Query: 42 FEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVE-WFEKMPGFGCEPDAVTCA 100
F+ A + EML R + P T+I+ +A+E WF+ + G D T
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK-GFVVDTRTSN 509
Query: 101 TVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVL 160
++ +D A R+ +D V+++ LI + D+ D+M
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Query: 161 GVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDA 220
G+KP+ TY+ L+ ++ K A +++ KRNG+ PD TYS ++ E+
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 221 LGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLIT 280
+ EM + + N L+ G L A+E+ ED+K GI P+ +T++SLI
Sbjct: 630 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI-SPNSATYTSLIK 688
Query: 281 VYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
S ++V EA+ + EM G +PN+F T L+ YG
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYG 726
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 121/254 (47%), Gaps = 5/254 (1%)
Query: 40 KDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTC 99
K + A DEM++R LKPDN T++ +I + + A+++++ G PD T
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Query: 100 ATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKV 159
+ +I + E + + +D ++N + +TV ++ LI+ Y L + +DMK
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 160 LGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAY--IGGYLR 217
G+ PN TY +L+ + + AKL++EEM+ G+ P+ Y+ L+ Y +G ++
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 733
Query: 218 EDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSS 277
+ L REM + +++ A G + EA + +++ GI PD T+
Sbjct: 734 VECL--LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV-PDSITYKE 790
Query: 278 LITVYSCFAKVSEA 291
I Y V EA
Sbjct: 791 FIYGYLKQGGVLEA 804
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 131/317 (41%), Gaps = 11/317 (3%)
Query: 64 FATMINCARLCSMSDRAVEWFEKMPGF-----GCEPDAVTCATVIFAYARVENVDMAERL 118
F + C L + RA E+ + F G PD T I A+ + V+ A +L
Sbjct: 223 FPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKL 282
Query: 119 YDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYR 178
+ + + + VTF+ +I GM YD+ + M G++P L TY+ L+ + R
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 342
Query: 179 ARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDL 238
A++ A + +EM + G P+ I Y+ L+ ++I A+ I M + +T
Sbjct: 343 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 402
Query: 239 CNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEM 298
N L+ G D A + +++ S G + ++ +F+S+I + A + EM
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSIG-FNVNQGSFTSVICLLCSHLMFDSALRFVGEM 461
Query: 299 IESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPME 358
+ P ++T L+ + L+ G V D LL+ +
Sbjct: 462 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC----- 516
Query: 359 ELGKLIDCIEKANEELG 375
E GKL + E LG
Sbjct: 517 EAGKLDEAFRIQKEILG 533
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 142/325 (43%), Gaps = 36/325 (11%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++ L+ A+ F K E A KLF +M + + P+ VTF T+I+ +C D A +
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
EKM G EP +T + ++ R + + A + + + + + ++ LI +
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
++ + + D M G+ TYNTL+ + + A+ + +EM G + + ++
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 205 ST---LLRAYI--------------------GGYLREDALGIYREMKENRI--------- 232
++ LL +++ GG L G+ + K ++
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 498
Query: 233 -GVTVD--LCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVS 289
G VD N LL + G LDEA I ++I G D ++++LI+ K+
Sbjct: 499 KGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVM-DRVSYNTLISGCCGKKKLD 557
Query: 290 EAEAMLNEMIESGFKPNIFVITPLV 314
EA L+EM++ G KP+ + + L+
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILI 582
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 4/193 (2%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
Y+V + K + E ++ FDEM+ + ++P+ V + +I A+E E M
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 672
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
G P++ T ++I + + V+ A+ L++ + E + ++ALI YG L
Sbjct: 673 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV 732
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+ + +M V PN TY ++ R A + EM+ GI PD ITY
Sbjct: 733 KVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY---- 788
Query: 209 RAYIGGYLREDAL 221
+ +I GYL++ +
Sbjct: 789 KEFIYGYLKQGGV 801
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 115/277 (41%), Gaps = 8/277 (2%)
Query: 30 NVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPG 89
N+ + + +F+ + FD ++ + + PD F T IN + AV+ F KM
Sbjct: 230 NILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEE 288
Query: 90 FGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQ 149
G P+ VT TVI D A ++ +T+S L+K +
Sbjct: 289 AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGD 348
Query: 150 CLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLR 209
V +M G PN+ YN L+ + A A I + M G+S TY+TL++
Sbjct: 349 AYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIK 408
Query: 210 AYIGGYLREDALGIYREMKENRIGVTVD---LCNLLLSMCADVGFLDEAVEIFEDIKSSG 266
Y ++A + +EM IG V+ +++ +C+ + F D A+ ++
Sbjct: 409 GYCKNGQADNAERLLKEMLS--IGFNVNQGSFTSVICLLCSHLMF-DSALRFVGEMLLRN 465
Query: 267 IYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGF 303
+ P ++LI+ K S+A + + + GF
Sbjct: 466 M-SPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 501
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 127/278 (45%), Gaps = 3/278 (1%)
Query: 42 FEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVE-WFEKMPGFGCEPDAVTCA 100
F+ A + EML R + P T+I+ +A+E WF+ + G D T
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK-GFVVDTRTSN 509
Query: 101 TVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVL 160
++ +D A R+ +D V+++ LI + D+ D+M
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Query: 161 GVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDA 220
G+KP+ TY+ L+ ++ K A +++ KRNG+ PD TYS ++ E+
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 221 LGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLIT 280
+ EM + + N L+ G L A+E+ ED+K GI P+ +T++SLI
Sbjct: 630 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI-SPNSATYTSLIK 688
Query: 281 VYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
S ++V EA+ + EM G +PN+F T L+ YG
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYG 726
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 121/254 (47%), Gaps = 5/254 (1%)
Query: 40 KDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTC 99
K + A DEM++R LKPDN T++ +I + + A+++++ G PD T
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Query: 100 ATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKV 159
+ +I + E + + +D ++N + +TV ++ LI+ Y L + +DMK
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 160 LGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAY--IGGYLR 217
G+ PN TY +L+ + + AKL++EEM+ G+ P+ Y+ L+ Y +G ++
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 733
Query: 218 EDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSS 277
+ L REM + +++ A G + EA + +++ GI PD T+
Sbjct: 734 VECL--LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV-PDSITYKE 790
Query: 278 LITVYSCFAKVSEA 291
I Y V EA
Sbjct: 791 FIYGYLKQGGVLEA 804
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 131/317 (41%), Gaps = 11/317 (3%)
Query: 64 FATMINCARLCSMSDRAVEWFEKMPGF-----GCEPDAVTCATVIFAYARVENVDMAERL 118
F + C L + RA E+ + F G PD T I A+ + V+ A +L
Sbjct: 223 FPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKL 282
Query: 119 YDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYR 178
+ + + + VTF+ +I GM YD+ + M G++P L TY+ L+ + R
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 342
Query: 179 ARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDL 238
A++ A + +EM + G P+ I Y+ L+ ++I A+ I M + +T
Sbjct: 343 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 402
Query: 239 CNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEM 298
N L+ G D A + +++ S G + ++ +F+S+I + A + EM
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSIG-FNVNQGSFTSVICLLCSHLMFDSALRFVGEM 461
Query: 299 IESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPME 358
+ P ++T L+ + L+ G V D LL+ +
Sbjct: 462 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC----- 516
Query: 359 ELGKLIDCIEKANEELG 375
E GKL + E LG
Sbjct: 517 EAGKLDEAFRIQKEILG 533
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 142/325 (43%), Gaps = 36/325 (11%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++ L+ A+ F K E A KLF +M + + P+ VTF T+I+ +C D A +
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
EKM G EP +T + ++ R + + A + + + + + ++ LI +
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
++ + + D M G+ TYNTL+ + + A+ + +EM G + + ++
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 205 ST---LLRAYI--------------------GGYLREDALGIYREMKENRI--------- 232
++ LL +++ GG L G+ + K ++
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 498
Query: 233 -GVTVD--LCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVS 289
G VD N LL + G LDEA I ++I G D ++++LI+ K+
Sbjct: 499 KGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVM-DRVSYNTLISGCCGKKKLD 557
Query: 290 EAEAMLNEMIESGFKPNIFVITPLV 314
EA L+EM++ G KP+ + + L+
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILI 582
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 4/193 (2%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
Y+V + K + E ++ FDEM+ + ++P+ V + +I A+E E M
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 672
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
G P++ T ++I + + V+ A+ L++ + E + ++ALI YG L
Sbjct: 673 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV 732
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+ + +M V PN TY ++ R A + EM+ GI PD ITY
Sbjct: 733 KVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY---- 788
Query: 209 RAYIGGYLREDAL 221
+ +I GYL++ +
Sbjct: 789 KEFIYGYLKQGGV 801
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 115/277 (41%), Gaps = 8/277 (2%)
Query: 30 NVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPG 89
N+ + + +F+ + FD ++ + + PD F T IN + AV+ F KM
Sbjct: 230 NILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEE 288
Query: 90 FGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQ 149
G P+ VT TVI D A ++ +T+S L+K +
Sbjct: 289 AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGD 348
Query: 150 CLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLR 209
V +M G PN+ YN L+ + A A I + M G+S TY+TL++
Sbjct: 349 AYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIK 408
Query: 210 AYIGGYLREDALGIYREMKENRIGVTVD---LCNLLLSMCADVGFLDEAVEIFEDIKSSG 266
Y ++A + +EM IG V+ +++ +C+ + F D A+ ++
Sbjct: 409 GYCKNGQADNAERLLKEMLS--IGFNVNQGSFTSVICLLCSHLMF-DSALRFVGEMLLRN 465
Query: 267 IYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGF 303
+ P ++LI+ K S+A + + + GF
Sbjct: 466 M-SPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 501
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 134/276 (48%), Gaps = 1/276 (0%)
Query: 40 KDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTC 99
K A L D+M++ +PD +TF T+I+ L + + AV ++M GC+P+ VT
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 100 ATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKV 159
V+ + + D+A L ++ + D V F+ +I D LN++ +M+
Sbjct: 229 GVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 288
Query: 160 LGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLRED 219
G++PN+ TY++L+ + + A + +M I+P+ +T++ L+ A++ +
Sbjct: 289 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 348
Query: 220 ALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLI 279
A +Y +M + I + N L++ LD+A ++FE + S + PD T+++LI
Sbjct: 349 AEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF-PDVVTYNTLI 407
Query: 280 TVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
+ +V + + EM G + T L++
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 140/306 (45%), Gaps = 36/306 (11%)
Query: 12 RYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCA 71
+ L D I+ LV +N + F K F AEKL+D+M++R + PD T+ +++N
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Query: 72 RLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDT 131
+ D+A + FE M C PD VT T+I + + + V+ L+ DT
Sbjct: 376 CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 435
Query: 132 VTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEE 191
VT++ LI+ G+ D D C N A+ ++++
Sbjct: 436 VTYTTLIQ--GLFHDGD-CDN--------------------------------AQKVFKQ 460
Query: 192 MKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGF 251
M +G+ PD +TYS LL E AL ++ M+++ I + + + ++ G
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 520
Query: 252 LDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVIT 311
+D+ ++F + G+ +P+ T++++I+ + EA A+L +M E G PN
Sbjct: 521 VDDGWDLFCSLSLKGV-KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYN 579
Query: 312 PLVKCY 317
L++ +
Sbjct: 580 TLIRAH 585
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 135/293 (46%), Gaps = 1/293 (0%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+V +N + K K F+ L ++M + ++ T+ +INC S A+
Sbjct: 84 SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 143
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
KM G EP VT ++++ Y + + A L D+ +R DT+TF+ LI +
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
+ + + D M G +PNL TY ++ + + LA + +M+ I D + +
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIF 263
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
+T++ + +DAL +++EM+ I V + L+S G +A ++ D+
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
I P+ TF++LI + K EAE + ++MI+ P+IF LV +
Sbjct: 324 KKI-NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 144/292 (49%), Gaps = 5/292 (1%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMS--DRAVE 82
++V++N + K + + A LF EM + ++P+ VT++++I+C LCS A +
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC--LCSYGRWSDASQ 316
Query: 83 WFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG 142
M P+ VT +I A+ + AE+LYD + D T+++L+ +
Sbjct: 317 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
M + D+ +++ M P++ TYNTL+ ++++ ++ EM G+ D +
Sbjct: 377 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 203 TYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDI 262
TY+TL++ ++A ++++M + + + ++LL + G L++A+E+F+ +
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 263 KSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
+ S I + D ++++I KV + + + G KPN+ ++
Sbjct: 497 QKSEI-KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 547
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 113/231 (48%), Gaps = 1/231 (0%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++V YN +K F K K E +LF EM R L D VT+ T+I D A + F
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
++M G PD +T + ++ ++ A ++D + +LD ++ +I+
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 518
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
D +++ + + GVKPN+ TYNT++ + R A + ++MK +G P+ TY
Sbjct: 519 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 578
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEA 255
+TL+RA++ + + + REM+ R L+ +M D G LD++
Sbjct: 579 NTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHD-GRLDKS 628
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 124/276 (44%), Gaps = 1/276 (0%)
Query: 42 FEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCAT 101
+ A LF M++ + P V F +++ D + EKM T
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 102 VIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLG 161
+I + R + +A L + + VT S+L+ Y + + + D M +G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 162 VKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDAL 221
+P+ T+ TL+ ++ K A + + M + G P+ +TY ++ + AL
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 222 GIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITV 281
+ +M+ +I V + N ++ +D+A+ +F+++++ GI +P+ T+SSLI+
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI-RPNVVTYSSLISC 304
Query: 282 YSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ + S+A +L++MIE PN+ L+ +
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 340
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 132/287 (45%), Gaps = 1/287 (0%)
Query: 12 RYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCA 71
R L D I+ +V ++ + F K AEKL+DEM++R + PD T++++IN
Sbjct: 312 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Query: 72 RLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDT 131
+ D A FE M C P+ VT T+I + + + VD L+ +T
Sbjct: 372 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 132 VTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEE 191
VT++ LI + + D V+ M GV P++ TY+ LL + K A +++E
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEY 491
Query: 192 MKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGF 251
++R+ + PD TY+ ++ ED ++ + + V ++S G
Sbjct: 492 LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 551
Query: 252 LDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEM 298
+EA +F ++K G PD T+++LI + + + ++ EM
Sbjct: 552 KEEADALFREMKEEGPL-PDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 152/293 (51%), Gaps = 1/293 (0%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+V YN ++ + A +L +M++RK+ P+ VTF+ +I+ A + +
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
++M +PD T +++I + + +D A+ +++ +++ + VT++ LIK +
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
+ D+ + ++ +M G+ N TY TL+ ++AR+ A++++++M +G+ PD +TY
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
S LL E AL ++ ++ +++ + N+++ G +++ ++F +
Sbjct: 470 SILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 529
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
G+ +P+ T++++++ + EA+A+ EM E G P+ L++ +
Sbjct: 530 KGV-KPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAH 581
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 144/317 (45%), Gaps = 1/317 (0%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++V N + F A L +M++ +PD+ TF T+I+ + + AV
Sbjct: 150 DIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALV 209
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
++M GC+PD VT V+ + ++D+A L + + V ++ +I
Sbjct: 210 DRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNY 269
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
++ + LN++ +M G++PN+ TYN+L+ + + A + +M I+P+ +T+
Sbjct: 270 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 329
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
S L+ A++ +A +Y EM + I + + L++ LDEA +FE + S
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 389
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXX 324
+ P+ T+++LI + +V E + EM + G N T L+ +
Sbjct: 390 KDCF-PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECD 448
Query: 325 XXXXXXXRGLDWGIVPD 341
+ + G++PD
Sbjct: 449 NAQIVFKQMVSDGVLPD 465
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 134/302 (44%), Gaps = 1/302 (0%)
Query: 16 DKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCS 75
D +K +V ++ + K F+ L ++M + + T++ +INC S
Sbjct: 71 DMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRS 130
Query: 76 MSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFS 135
A+ KM G EPD VT +++ + + A L + ++ D+ TF+
Sbjct: 131 QLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFN 190
Query: 136 ALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRN 195
LI + + + D M V G +P+L TY ++ + + LA + ++M++
Sbjct: 191 TLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQG 250
Query: 196 GISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEA 255
I P + Y+T++ A DAL ++ EM I V N L+ + G +A
Sbjct: 251 KIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA 310
Query: 256 VEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
+ D+ I P+ TFS+LI + K+ EAE + +EMI+ P+IF + L+
Sbjct: 311 SRLLSDMIERKI-NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 369
Query: 316 CY 317
+
Sbjct: 370 GF 371
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 132/276 (47%), Gaps = 1/276 (0%)
Query: 42 FEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCAT 101
+ A LF +M++ + P V F+ +++ + D + E+M G + T +
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 102 VIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLG 161
+I + R + +A + + + D VT ++L+ + +++ M +G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 162 VKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDAL 221
+P+ T+NTL+ ++R + A + + M G PD +TY ++ + AL
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 222 GIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITV 281
+ ++M++ +I V + N ++ + +++A+ +F ++ + GI +P+ T++SLI
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI-RPNVVTYNSLIRC 300
Query: 282 YSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ + S+A +L++MIE PN+ + L+ +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 109/231 (47%), Gaps = 1/231 (0%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+V YN +K F K K + +LF EM QR L + VT+ T+I+ D A F
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
++M G PD +T + ++ V+ A +++ + D T++ +I+
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKA 514
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
+ +++ + + GVKPN+ TY T++ R A ++ EMK G PD TY
Sbjct: 515 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTY 574
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEA 255
+TL+RA++ + + + REM+ R L+ +M D G LD++
Sbjct: 575 NTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHD-GRLDKS 624
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 135/276 (48%), Gaps = 1/276 (0%)
Query: 40 KDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTC 99
K A L D+M++ +PD +TF T+I+ L + + AV ++M GC+P+ VT
Sbjct: 94 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 153
Query: 100 ATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKV 159
V+ + ++D+A L ++ + D V F+ +I D LN++ +M+
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213
Query: 160 LGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLRED 219
G++PN+ TY++L+ + + A + +M I+P+ +T++ L+ A++ +
Sbjct: 214 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 273
Query: 220 ALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLI 279
A ++ +M + I + N L++ LD+A ++FE + S + PD T+++LI
Sbjct: 274 AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF-PDLDTYNTLI 332
Query: 280 TVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
+ +V + + EM G + T L++
Sbjct: 333 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 133/289 (46%), Gaps = 1/289 (0%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
+N + K K F+ L ++M + + + T+ +INC S A+ KM
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
G EP VT ++++ Y + + A L D+ +R DT+TF+ LI +
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+ + + D M G +PNL TY ++ + + LA + +M+ I D + ++T++
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIY 268
+ +DAL +++EM+ I V + L+S G +A ++ D+ I
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI- 251
Query: 269 QPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
P+ TF++LI + K EAE + ++MI+ P+IF L+ +
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 142/312 (45%), Gaps = 48/312 (15%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSD--RAVEWFEKMPGFGCEPDAVTCATV 102
A L D M+QR +P+ VT+ ++N LC D A KM E D V T+
Sbjct: 134 AVALVDRMVQRGCQPNLVTYGVVVN--GLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 103 IFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIK---MYGMLEDYDQCLNVYDDMKV 159
I + + +VD A L+ +T+ R + VT+S+LI YG D Q L+ DM
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS---DMIE 248
Query: 160 LGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAY-------- 211
+ PNL T+N L+ A + K + A+ ++++M + I PD TY++L+ +
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308
Query: 212 -----------------------IGGYLR----EDALGIYREMKE-NRIGVTVDLCNLLL 243
I G+ + ED ++REM +G TV L+
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Query: 244 SMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGF 303
+ D G D A ++F+ + S G+ PD T+S L+ K+ +A + + M +S
Sbjct: 369 GLFHD-GDCDNAQKVFKQMVSDGV-PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 304 KPNIFVITPLVK 315
K +I++ T +++
Sbjct: 427 KLDIYIYTTMIE 438
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 129/287 (44%), Gaps = 1/287 (0%)
Query: 12 RYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCA 71
+ L D I+ LV +N + F K F AEKL D+M++R + PD T+ ++IN
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 72 RLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDT 131
+ D+A + FE M C PD T T+I + + + V+ L+ DT
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 132 VTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEE 191
VT++ LI+ D D V+ M GV P++ TY+ LL + K A +++
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 420
Query: 192 MKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGF 251
M+++ I D Y+T++ +D ++ + + V N ++S
Sbjct: 421 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 480
Query: 252 LDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEM 298
L EA + + +K G PD T+++LI + + + ++ EM
Sbjct: 481 LQEAYALLKKMKEDGPL-PDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 144/292 (49%), Gaps = 5/292 (1%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMS--DRAVE 82
++V++N + K + + A LF EM + ++P+ VT++++I+C LCS A +
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC--LCSYGRWSDASQ 241
Query: 83 WFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG 142
M P+ VT +I A+ + AE+L+D + D T+++LI +
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
M + D+ +++ M P+L TYNTL+ ++++ ++ EM G+ D +
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361
Query: 203 TYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDI 262
TY+TL++ ++A ++++M + + + ++LL + G L++A+E+F+ +
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 263 KSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
+ S I + D ++++I KV + + + G KPN+ ++
Sbjct: 422 QKSEI-KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 472
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 112/231 (48%), Gaps = 1/231 (0%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+L YN +K F K K E +LF EM R L D VT+ T+I D A + F
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
++M G PD +T + ++ ++ A ++D + +LD ++ +I+
Sbjct: 384 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 443
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
D +++ + + GVKPN+ TYNT++ + R A + ++MK +G PD TY
Sbjct: 444 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 503
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEA 255
+TL+RA++ + + + REM+ R L+ +M D G LD++
Sbjct: 504 NTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHD-GRLDKS 553
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 120/266 (45%), Gaps = 1/266 (0%)
Query: 52 MLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVEN 111
M++ + P F +++ D + EKM G + T +I + R
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 112 VDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNT 171
+ +A L + + VT S+L+ Y + + + D M +G +P+ T+ T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 172 LLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENR 231
L+ ++ K A + + M + G P+ +TY ++ + A + +M+ +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 232 IGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEA 291
I V + N ++ +D+A+ +F+++++ GI +P+ T+SSLI+ + + S+A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI-RPNVVTYSSLISCLCSYGRWSDA 239
Query: 292 EAMLNEMIESGFKPNIFVITPLVKCY 317
+L++MIE PN+ L+ +
Sbjct: 240 SQLLSDMIEKKINPNLVTFNALIDAF 265
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 142/290 (48%), Gaps = 4/290 (1%)
Query: 14 LRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARL 73
L+D+ +P ++++Y ++ + + + AEK+F EM ++P+ T++ +I+
Sbjct: 247 LKDRFEP----DVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCR 302
Query: 74 CSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVT 133
C RA + F M GC P+A+T ++ + + + ++Y++ K DT+T
Sbjct: 303 CGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTIT 362
Query: 134 FSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMK 193
++ LI+ + E+ + + V + M + N T+NT+ + + R A +Y +M
Sbjct: 363 YNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMM 422
Query: 194 RNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLD 253
P+ +TY+ L+R ++G + L + +EM + + V+ LL++M +G +
Sbjct: 423 EAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWN 482
Query: 254 EAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGF 303
A ++F+++ P S + ++ ++ + E ++ +MI+ G
Sbjct: 483 NAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 142/292 (48%), Gaps = 8/292 (2%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
YN + + K + F+ A L D M R ++ TF +I ++ AV F +M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
+GC PD + + VI +R A+ +D K + + D + ++ L++ + +
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLK-DRFEPDVIVYTNLVRGWCRAGEIS 272
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+ V+ +MK+ G++PN+ TY+ ++ A+ R + A ++ +M +G +P+ IT++ L+
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDLCN---LLLSMCADVGFLDEAVEIFEDIKSS 265
R ++ E L +Y +MK ++G D L+ + C D L+ AV++ +
Sbjct: 333 RVHVKAGRTEKVLQVYNQMK--KLGCEPDTITYNFLIEAHCRDEN-LENAVKVLNTMIKK 389
Query: 266 GIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ + STF+++ V+ A M ++M+E+ +PN L++ +
Sbjct: 390 KC-EVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMF 440
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 144/304 (47%), Gaps = 9/304 (2%)
Query: 14 LRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARL 73
+R I P + V+Y + F K D A K F EM R + PD +T+ +I +
Sbjct: 343 IRQGILP----DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII--SGF 396
Query: 74 CSMSD--RAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDT 131
C + D A + F +M G EPD+VT +I Y + ++ A R+++ +
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 132 VTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEE 191
VT++ LI D D + +M +G++PN+ TYN+++ + ++ A + E
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 192 MKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGF 251
+ G++ D +TY+TL+ AY + A I +EM + T+ N+L++ G
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 252 LDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVIT 311
L++ ++ + + GI P+ +TF+SL+ Y + A A+ +M G P+
Sbjct: 577 LEDGEKLLNWMLAKGI-APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 635
Query: 312 PLVK 315
LVK
Sbjct: 636 NLVK 639
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 135/301 (44%), Gaps = 7/301 (2%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSD--RAVEWFEKMPGFGCEPDAVTCATV 102
AE+ F EM+++ + PD V + T+I+ C D A ++F +M PD +T +
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLID--GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Query: 103 IFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGV 162
I + ++ ++ A +L+ + D+VTF+ LI Y V++ M G
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 163 KPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALG 222
PN+ TY TL+ + + A + EM + G+ P+ TY++++ E+A+
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 223 IYREMKENRIGV-TVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITV 281
+ E + + TV L+ + C G +D+A EI +++ G+ QP TF+ L+
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKS-GEMDKAQEILKEMLGKGL-QPTIVTFNVLMNG 570
Query: 282 YSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPD 341
+ + + E +LN M+ G PN LVK Y G+ PD
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 342 G 342
G
Sbjct: 631 G 631
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 150/298 (50%), Gaps = 11/298 (3%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINC-ARLCSMSDRAVEW 83
+++ Y+ + + + + + KL + M ++ LKP++ + ++I R+C +++ A E
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE-AEEA 338
Query: 84 FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGM 143
F +M G PD V T+I + + ++ A + + + + D +T++A+I +
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYIT 203
+ D + ++ +M G++P+ T+ L+ +A A ++ M + G SP+ +T
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 204 YSTLLRAYIGGYLREDALGIYREMKEN--RIGVTVDLC--NLLLSMCADVGFLDEAVEIF 259
Y+TL I G +E L E+ +IG+ ++ N +++ G ++EAV++
Sbjct: 459 YTTL----IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 260 EDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ +++G+ D T+++L+ Y ++ +A+ +L EM+ G +P I L+ +
Sbjct: 515 GEFEAAGL-NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 132/294 (44%), Gaps = 4/294 (1%)
Query: 23 GKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKL--KPDNVTFATMINCARLCSMSDRA 80
G + +++V +V A ++F++ML L D+ + ++ C + A
Sbjct: 172 GSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCN-VYLTRLSKDCYKTATA 230
Query: 81 VEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKM 140
+ F + P G + + VI ++ + A L + + + D +++S ++
Sbjct: 231 IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNG 290
Query: 141 YGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPD 200
Y + D+ + + MK G+KPN Y +++ + R K A+ + EM R GI PD
Sbjct: 291 YCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD 350
Query: 201 YITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFE 260
+ Y+TL+ + A + EM I V ++S +G + EA ++F
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 261 DIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
++ G+ +PD TF+ LI Y + +A + N MI++G PN+ T L+
Sbjct: 411 EMFCKGL-EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 18/256 (7%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
+V Y + K D + A +L EM + L+P+ T+ +++N + AV+
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIK---MYG 142
+ G D VT T++ AY + +D A+ + + + VTF+ L+ ++G
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPL-LAKLIYEEMKRNGISPDY 201
MLED ++ LN M G+ PN T+N+L+ Y R L A IY++M G+ PD
Sbjct: 576 MLEDGEKLLNW---MLAKGIAPNATTFNSLVKQ-YCIRNNLKAATAIYKDMCSRGVGPDG 631
Query: 202 ITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLD-----EAV 256
TY L++ + ++A +++EMK V+V ++L+ GFL EA
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIK-----GFLKRKKFLEAR 686
Query: 257 EIFEDIKSSGIYQPDE 272
E+F+ ++ G+ E
Sbjct: 687 EVFDQMRREGLAADKE 702
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 84/176 (47%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+ V Y M + K + + A+++ EML + L+P VTF ++N L M + +
Sbjct: 525 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
M G P+A T +++ Y N+ A +Y + D T+ L+K +
Sbjct: 585 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 644
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPD 200
+ + ++ +MK G ++ TY+ L+ + +K L A+ ++++M+R G++ D
Sbjct: 645 RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 80/181 (44%), Gaps = 4/181 (2%)
Query: 2 ENSETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDN 61
E + ++ L ++PT +V +NV M F E EKL + ML + + P+
Sbjct: 541 EMDKAQEILKEMLGKGLQPT----IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596
Query: 62 VTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDR 121
TF +++ + + A ++ M G PD T ++ + + N+ A L+
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 656
Query: 122 AKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARK 181
K + + + T+S LIK + + + + V+D M+ G+ + ++ Y+ ++
Sbjct: 657 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKR 716
Query: 182 P 182
P
Sbjct: 717 P 717
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 144/304 (47%), Gaps = 9/304 (2%)
Query: 14 LRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARL 73
+R I P + V+Y + F K D A K F EM R + PD +T+ +I +
Sbjct: 343 IRQGILP----DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII--SGF 396
Query: 74 CSMSD--RAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDT 131
C + D A + F +M G EPD+VT +I Y + ++ A R+++ +
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 132 VTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEE 191
VT++ LI D D + +M +G++PN+ TYN+++ + ++ A + E
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 192 MKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGF 251
+ G++ D +TY+TL+ AY + A I +EM + T+ N+L++ G
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 252 LDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVIT 311
L++ ++ + + GI P+ +TF+SL+ Y + A A+ +M G P+
Sbjct: 577 LEDGEKLLNWMLAKGI-APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 635
Query: 312 PLVK 315
LVK
Sbjct: 636 NLVK 639
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 135/301 (44%), Gaps = 7/301 (2%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSD--RAVEWFEKMPGFGCEPDAVTCATV 102
AE+ F EM+++ + PD V + T+I+ C D A ++F +M PD +T +
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLID--GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Query: 103 IFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGV 162
I + ++ ++ A +L+ + D+VTF+ LI Y V++ M G
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 163 KPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALG 222
PN+ TY TL+ + + A + EM + G+ P+ TY++++ E+A+
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 223 IYREMKENRIGV-TVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITV 281
+ E + + TV L+ + C G +D+A EI +++ G+ QP TF+ L+
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKS-GEMDKAQEILKEMLGKGL-QPTIVTFNVLMNG 570
Query: 282 YSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPD 341
+ + + E +LN M+ G PN LVK Y G+ PD
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 342 G 342
G
Sbjct: 631 G 631
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 150/298 (50%), Gaps = 11/298 (3%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINC-ARLCSMSDRAVEW 83
+++ Y+ + + + + + KL + M ++ LKP++ + ++I R+C +++ A E
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE-AEEA 338
Query: 84 FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGM 143
F +M G PD V T+I + + ++ A + + + + D +T++A+I +
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYIT 203
+ D + ++ +M G++P+ T+ L+ +A A ++ M + G SP+ +T
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 204 YSTLLRAYIGGYLREDALGIYREMKEN--RIGVTVDLC--NLLLSMCADVGFLDEAVEIF 259
Y+TL I G +E L E+ +IG+ ++ N +++ G ++EAV++
Sbjct: 459 YTTL----IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 260 EDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ +++G+ D T+++L+ Y ++ +A+ +L EM+ G +P I L+ +
Sbjct: 515 GEFEAAGL-NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 132/294 (44%), Gaps = 4/294 (1%)
Query: 23 GKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKL--KPDNVTFATMINCARLCSMSDRA 80
G + +++V +V A ++F++ML L D+ + ++ C + A
Sbjct: 172 GSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCN-VYLTRLSKDCYKTATA 230
Query: 81 VEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKM 140
+ F + P G + + VI ++ + A L + + + D +++S ++
Sbjct: 231 IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNG 290
Query: 141 YGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPD 200
Y + D+ + + MK G+KPN Y +++ + R K A+ + EM R GI PD
Sbjct: 291 YCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD 350
Query: 201 YITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFE 260
+ Y+TL+ + A + EM I V ++S +G + EA ++F
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 261 DIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
++ G+ +PD TF+ LI Y + +A + N MI++G PN+ T L+
Sbjct: 411 EMFCKGL-EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 18/256 (7%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
+V Y + K D + A +L EM + L+P+ T+ +++N + AV+
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIK---MYG 142
+ G D VT T++ AY + +D A+ + + + VTF+ L+ ++G
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPL-LAKLIYEEMKRNGISPDY 201
MLED ++ LN M G+ PN T+N+L+ Y R L A IY++M G+ PD
Sbjct: 576 MLEDGEKLLNW---MLAKGIAPNATTFNSLVKQ-YCIRNNLKAATAIYKDMCSRGVGPDG 631
Query: 202 ITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLD-----EAV 256
TY L++ + ++A +++EMK V+V ++L+ GFL EA
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIK-----GFLKRKKFLEAR 686
Query: 257 EIFEDIKSSGIYQPDE 272
E+F+ ++ G+ E
Sbjct: 687 EVFDQMRREGLAADKE 702
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 84/176 (47%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+ V Y M + K + + A+++ EML + L+P VTF ++N L M + +
Sbjct: 525 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
M G P+A T +++ Y N+ A +Y + D T+ L+K +
Sbjct: 585 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 644
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPD 200
+ + ++ +MK G ++ TY+ L+ + +K L A+ ++++M+R G++ D
Sbjct: 645 RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 80/181 (44%), Gaps = 4/181 (2%)
Query: 2 ENSETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDN 61
E + ++ L ++PT +V +NV M F E EKL + ML + + P+
Sbjct: 541 EMDKAQEILKEMLGKGLQPT----IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596
Query: 62 VTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDR 121
TF +++ + + A ++ M G PD T ++ + + N+ A L+
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 656
Query: 122 AKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARK 181
K + + + T+S LIK + + + + V+D M+ G+ + ++ Y+ ++
Sbjct: 657 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKR 716
Query: 182 P 182
P
Sbjct: 717 P 717
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 135/278 (48%), Gaps = 1/278 (0%)
Query: 40 KDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTC 99
K A L D+M++ KPD TF T+I+ L + + AV ++M GC+PD VT
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 100 ATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKV 159
TV+ + ++D+A L ++ + + + V F+ +I + ++++ +M+
Sbjct: 227 GTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET 286
Query: 160 LGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLRED 219
G++PN+ TYN+L+ + + A + M I+P+ +T++ L+ A+ +
Sbjct: 287 KGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVE 346
Query: 220 ALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLI 279
A ++ EM + I NLL++ LDEA ++F+ + S P+ T+++LI
Sbjct: 347 AEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL-PNIQTYNTLI 405
Query: 280 TVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ +V + + EM + G N T +++ +
Sbjct: 406 NGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF 443
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 128/275 (46%), Gaps = 1/275 (0%)
Query: 43 EGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATV 102
+ A LF +M++ + P V F +++ + + + E+M G D T +
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 103 IFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGV 162
I + R + +A + + + D VT S+L+ Y + + + D M +G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 163 KPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALG 222
KP+ T+ TL+ ++ K A + ++M + G PD +TY T++ + AL
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244
Query: 223 IYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVY 282
+ +M+ RI V + N ++ ++ AV++F ++++ GI +P+ T++SLI
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI-RPNVVTYNSLINCL 303
Query: 283 SCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ + S+A +L+ M+E PN+ L+ +
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAF 338
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 152/336 (45%), Gaps = 36/336 (10%)
Query: 14 LRDKIKPTRGK-ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCAR 72
L +K++ R K +V++N + K + E A LF EM + ++P+ VT+ ++INC
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC-- 302
Query: 73 LCSMS--DRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLD 130
LC+ A M P+ VT +I A+ + + AE+L++ + D
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 131 TVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYE 190
T+T++ LI + M D+ ++ M PN+ TYNTL+ + ++ ++
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 191 EMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVG 250
EM + G+ + +TY+T+++ + + A ++++M NR+ + ++LL G
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG 482
Query: 251 FLDEAVEIFEDIKSSG------IY-------------------------QPDESTFSSLI 279
LD A+ IF+ ++ S IY +PD T++++I
Sbjct: 483 KLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMI 542
Query: 280 TVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
+ + EA+ + +M E G PN L++
Sbjct: 543 SGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIR 578
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 136/337 (40%), Gaps = 36/337 (10%)
Query: 16 DKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCS 75
D +K +V +N + K FE L ++M + D T++ INC S
Sbjct: 73 DMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRS 132
Query: 76 MSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFS 135
A+ KM G EPD VT ++++ Y + + A L D+ ++ DT TF+
Sbjct: 133 QLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFT 192
Query: 136 ALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTY-------------------------- 169
LI + + + + D M G +P+L TY
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAA 252
Query: 170 ---------NTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDA 220
NT++ ++ + R +A ++ EM+ GI P+ +TY++L+ DA
Sbjct: 253 RIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDA 312
Query: 221 LGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLIT 280
+ M E +I V N L+ G L EA ++ E++ I PD T++ LI
Sbjct: 313 SRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI-DPDTITYNLLIN 371
Query: 281 VYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ ++ EA+ M M+ PNI L+ +
Sbjct: 372 GFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 106/227 (46%), Gaps = 4/227 (1%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
YN + F KCK E +LF EM QR L + VT+ T+I D A F++M
Sbjct: 401 YNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
D +T + ++ +D A ++ + L+ ++ +I+ GM +
Sbjct: 461 SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIE--GMCK-AG 517
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+ +D L +KP++ TYNT++ + R A ++ +MK +G P+ TY+TL+
Sbjct: 518 KVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEA 255
RA + R + + +EM+ + +L+ +M D G LD++
Sbjct: 578 RANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHD-GRLDKS 623
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 159/316 (50%), Gaps = 13/316 (4%)
Query: 5 ETAP-VVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVT 63
ETA VV R D+IKP +V N + + A F +M + +K + VT
Sbjct: 423 ETAKEVVSRMKEDEIKPN----VVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVT 478
Query: 64 FATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAK 123
+ T+I+ S ++A+ W+EKM GC PDA +I +V A R+ ++ K
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 124 TENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPL 183
+ LD + ++ LI ++ + ++ + DM+ G KP+ TYNTL+ + +
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 184 LAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMK-ENRIGVTVDLCNLL 242
+ + E+M+ +G+ P TY ++ AY ++AL ++++M +++ + N+L
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 243 LSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAML---NEMI 299
++ + +G +A+ + E++K + +P+ T+++L + C + ++ E +L +EM+
Sbjct: 659 INAFSKLGNFGQALSLKEEMKMKMV-RPNVETYNAL---FKCLNEKTQGETLLKLMDEMV 714
Query: 300 ESGFKPNIFVITPLVK 315
E +PN + L++
Sbjct: 715 EQSCEPNQITMEILME 730
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 133/333 (39%), Gaps = 47/333 (14%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
+N + + D L +M + K++PD VT +IN D A+E FE+M
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 89 G---------------FG---------------------------CEPDAVTCATVIFAY 106
G F C P+AVT +I Y
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 107 ARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNL 166
R ++ A+ + R K + + + VT + ++ + + + DM+ GVK N+
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 167 GTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYRE 226
TY TL+ A A YE+M G SPD Y L+ DA+ + +
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 227 MKENRIGVTVDLC--NLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSC 284
+KE G ++DL N+L+ + D ++ E+ D++ G +PD T+++LI+ +
Sbjct: 537 LKEG--GFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEG-KKPDSITYNTLISFFGK 593
Query: 285 FAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
E M+ +M E G P + ++ Y
Sbjct: 594 HKDFESVERMMEQMREDGLDPTVTTYGAVIDAY 626
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 132/326 (40%), Gaps = 36/326 (11%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEM-LQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
+ +N + K + AE+L M L+ + P+ VT+ +I+ + A E
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
+M +P+ VT T++ R ++MA + + E + + VT+ LI +
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGIS------- 198
+ ++ + Y+ M G P+ Y L+ + + R+ A + E++K G S
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 199 ----------------------------PDYITYSTLLRAYIGGYLREDALGIYREMKEN 230
PD ITY+TL+ + E + +M+E+
Sbjct: 551 MLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 231 RIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSE 290
+ TV ++ VG LDEA+++F+D+ P+ ++ LI +S +
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQ 670
Query: 291 AEAMLNEMIESGFKPNIFVITPLVKC 316
A ++ EM +PN+ L KC
Sbjct: 671 ALSLKEEMKMKMVRPNVETYNALFKC 696
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 3/192 (1%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+L+ YN+ + +F + E ++ +M + KPD++T+ T+I+ +
Sbjct: 545 DLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMM 604
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLY-DRAKTENWRLDTVTFSALIKMYGM 143
E+M G +P T VI AY V +D A +L+ D +TV ++ LI +
Sbjct: 605 EQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSK 664
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVY-RARKPLLAKLIYEEMKRNGISPDYI 202
L ++ Q L++ ++MK+ V+PN+ TYN L + + + L KL+ +EM P+ I
Sbjct: 665 LGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLM-DEMVEQSCEPNQI 723
Query: 203 TYSTLLRAYIGG 214
T L+ G
Sbjct: 724 TMEILMERLSGS 735
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/334 (19%), Positives = 131/334 (39%), Gaps = 42/334 (12%)
Query: 30 NVAMKVFKKCKDFEGAEKLFDEMLQRK--LKPDNVTFATMINCA---RLCSMSDRAVEWF 84
NV + V + + A K+ DEMLQ++ P+ +T +++ RL + ++ +
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLT-EEKIIALI 247
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
+ G P++V I + + + A + L+ F+AL+ G
Sbjct: 248 SRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRN 307
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
D + ++ M + ++P++ T L+ + ++R+ A ++E+M+
Sbjct: 308 MDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGK--------- 358
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
R G ++ D++ N L+ VG L EA E+ +K
Sbjct: 359 ----RTDDGNVIKADSIHF----------------NTLIDGLCKVGRLKEAEELLVRMKL 398
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV----KCYGXX 320
P+ T++ LI Y K+ A+ +++ M E KPN+ + +V + +G
Sbjct: 399 EERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLN 458
Query: 321 XXXXXXXXXXXRGLDWGIVPDG---HCCCCLLNI 351
G+ +V H CC + N+
Sbjct: 459 MAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 159/316 (50%), Gaps = 13/316 (4%)
Query: 5 ETAP-VVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVT 63
ETA VV R D+IKP +V N + + A F +M + +K + VT
Sbjct: 423 ETAKEVVSRMKEDEIKPN----VVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVT 478
Query: 64 FATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAK 123
+ T+I+ S ++A+ W+EKM GC PDA +I +V A R+ ++ K
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 124 TENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPL 183
+ LD + ++ LI ++ + ++ + DM+ G KP+ TYNTL+ + +
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 184 LAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMK-ENRIGVTVDLCNLL 242
+ + E+M+ +G+ P TY ++ AY ++AL ++++M +++ + N+L
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 243 LSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAML---NEMI 299
++ + +G +A+ + E++K + +P+ T+++L + C + ++ E +L +EM+
Sbjct: 659 INAFSKLGNFGQALSLKEEMKMKMV-RPNVETYNAL---FKCLNEKTQGETLLKLMDEMV 714
Query: 300 ESGFKPNIFVITPLVK 315
E +PN + L++
Sbjct: 715 EQSCEPNQITMEILME 730
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 133/333 (39%), Gaps = 47/333 (14%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
+N + + D L +M + K++PD VT +IN D A+E FEKM
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMR 356
Query: 89 G---------------FG---------------------------CEPDAVTCATVIFAY 106
G F C P+AVT +I Y
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGY 416
Query: 107 ARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNL 166
R ++ A+ + R K + + + VT + ++ + + + DM+ GVK N+
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 167 GTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYRE 226
TY TL+ A A YE+M G SPD Y L+ DA+ + +
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 227 MKENRIGVTVDLC--NLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSC 284
+KE G ++DL N+L+ + D ++ E+ D++ G +PD T+++LI+ +
Sbjct: 537 LKEG--GFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEG-KKPDSITYNTLISFFGK 593
Query: 285 FAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
E M+ +M E G P + ++ Y
Sbjct: 594 HKDFESVERMMEQMREDGLDPTVTTYGAVIDAY 626
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 132/326 (40%), Gaps = 36/326 (11%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEM-LQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
+ +N + K + AE+L M L+ + P+ VT+ +I+ + A E
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
+M +P+ VT T++ R ++MA + + E + + VT+ LI +
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGIS------- 198
+ ++ + Y+ M G P+ Y L+ + + R+ A + E++K G S
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 199 ----------------------------PDYITYSTLLRAYIGGYLREDALGIYREMKEN 230
PD ITY+TL+ + E + +M+E+
Sbjct: 551 MLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 231 RIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSE 290
+ TV ++ VG LDEA+++F+D+ P+ ++ LI +S +
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQ 670
Query: 291 AEAMLNEMIESGFKPNIFVITPLVKC 316
A ++ EM +PN+ L KC
Sbjct: 671 ALSLKEEMKMKMVRPNVETYNALFKC 696
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 3/192 (1%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+L+ YN+ + +F + E ++ +M + KPD++T+ T+I+ +
Sbjct: 545 DLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMM 604
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLY-DRAKTENWRLDTVTFSALIKMYGM 143
E+M G +P T VI AY V +D A +L+ D +TV ++ LI +
Sbjct: 605 EQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSK 664
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVY-RARKPLLAKLIYEEMKRNGISPDYI 202
L ++ Q L++ ++MK+ V+PN+ TYN L + + + L KL+ +EM P+ I
Sbjct: 665 LGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLM-DEMVEQSCEPNQI 723
Query: 203 TYSTLLRAYIGG 214
T L+ G
Sbjct: 724 TMEILMERLSGS 735
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/334 (19%), Positives = 131/334 (39%), Gaps = 42/334 (12%)
Query: 30 NVAMKVFKKCKDFEGAEKLFDEMLQRK--LKPDNVTFATMIN---CARLCSMSDRAVEWF 84
NV + V + + A K+ DEMLQ++ P+ +T +++ RL + ++ +
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLT-EEKIIALI 247
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
+ G P++V I + + + A + L+ F+AL+ G
Sbjct: 248 SRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRN 307
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
D + ++ M + ++P++ T L+ + ++R+ A ++E+M+
Sbjct: 308 MDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGK--------- 358
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
R G ++ D++ N L+ VG L EA E+ +K
Sbjct: 359 ----RTDDGNVIKADSIHF----------------NTLIDGLCKVGRLKEAEELLVRMKL 398
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV----KCYGXX 320
P+ T++ LI Y K+ A+ +++ M E KPN+ + +V + +G
Sbjct: 399 EERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLN 458
Query: 321 XXXXXXXXXXXRGLDWGIVPDG---HCCCCLLNI 351
G+ +V H CC + N+
Sbjct: 459 MAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 135/292 (46%), Gaps = 1/292 (0%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
+V +N + K F+ L + M ++ D ++ +INC S A+
Sbjct: 80 IVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLG 139
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
KM G EPD VT ++++ Y + + A L D+ ++ +TVTF+ LI +
Sbjct: 140 KMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHN 199
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
+ + + D M G +P+L TY T++ + + LA + ++M++ I D + Y+
Sbjct: 200 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYT 259
Query: 206 TLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSS 265
T++ A DAL ++ EM I V N L+ + G +A + D+
Sbjct: 260 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319
Query: 266 GIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
I P+ TFS+LI + K+ EAE + +EMI+ P+IF + L+ +
Sbjct: 320 KI-NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 151/290 (52%), Gaps = 1/290 (0%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
+V YN ++ + A +L +M++RK+ P+ VTF+ +I+ A + ++
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
+M +PD T +++I + + +D A+ +++ +++ + VT++ LIK + +
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
++ + ++ +M G+ N TYNTL+ +++A +A+ I+++M +G+ PD ITYS
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 206 TLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSS 265
LL E AL ++ ++++++ + N+++ G +++ ++F +
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Query: 266 GIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
G+ +P+ ++++I+ + EA+A+ EM E G PN L++
Sbjct: 530 GV-KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR 578
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 145/308 (47%), Gaps = 1/308 (0%)
Query: 8 PVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATM 67
P+ L L +K ++V + + + K A L D+M + +P+ VTF T+
Sbjct: 132 PLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTL 191
Query: 68 INCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENW 127
I+ L + + AV ++M GC+PD T TV+ + ++D+A L + +
Sbjct: 192 IHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 251
Query: 128 RLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKL 187
D V ++ +I ++ + LN++ +M G++PN+ TYN+L+ + + A
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 311
Query: 188 IYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCA 247
+ +M I+P+ +T+S L+ A++ +A +Y EM + I + + L++
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 248 DVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNI 307
LDEA +FE + S + P+ T+++LI + +V E + EM + G N
Sbjct: 372 MHDRLDEAKHMFELMISKDCF-PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430
Query: 308 FVITPLVK 315
L++
Sbjct: 431 VTYNTLIQ 438
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 140/303 (46%), Gaps = 1/303 (0%)
Query: 12 RYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCA 71
R L D I+ +V ++ + F K AEKL+DEM++R + PD T++++IN
Sbjct: 311 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Query: 72 RLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDT 131
+ D A FE M C P+ VT T+I + + + V+ L+ +T
Sbjct: 371 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430
Query: 132 VTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEE 191
VT++ LI+ D D ++ M GV P++ TY+ LL + + K A +++E
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 490
Query: 192 MKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGF 251
++++ + PD TY+ ++ ED ++ + + V + ++S G
Sbjct: 491 LQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGL 550
Query: 252 LDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVIT 311
+EA +F ++K G P+ T+++LI + + ++ EM GF + I+
Sbjct: 551 KEEADALFREMKEDGTL-PNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTIS 609
Query: 312 PLV 314
++
Sbjct: 610 MVI 612
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 129/276 (46%), Gaps = 1/276 (0%)
Query: 42 FEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCAT 101
+ A LF EM+Q + P V F +++ + D + E+M D +
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 102 VIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLG 161
+I + R + +A + + + D VT S+L+ Y + + + + D M V+
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 162 VKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDAL 221
+PN T+NTL+ ++ K A + + M G PD TY T++ + AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 222 GIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITV 281
+ ++M++ +I V + ++ + +++A+ +F ++ + GI +P+ T++SLI
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI-RPNVVTYNSLIRC 299
Query: 282 YSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ + S+A +L++MIE PN+ + L+ +
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 335
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 141/309 (45%), Gaps = 10/309 (3%)
Query: 7 APVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFAT 66
A V L KI PT L + V MK F + + A L +M + P++V + T
Sbjct: 202 ANVFYDMLSRKIPPT----LFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQT 257
Query: 67 MINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTEN 126
+I+ C+ + A++ E+M GC PDA T VI + + ++ A ++ +R
Sbjct: 258 LIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRG 317
Query: 127 WRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAK 186
+ D +T+ L+ + D +++ + KP + +NTL+ + AK
Sbjct: 318 FAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAK 373
Query: 187 LIYEEMKRN-GISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSM 245
+ +M + GI PD TY++L+ Y L AL + +M+ V +L+
Sbjct: 374 AVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDG 433
Query: 246 CADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKP 305
+G +DEA + ++ + G+ +P+ F+ LI+ + ++ EA + EM G KP
Sbjct: 434 FCKLGKIDEAYNVLNEMSADGL-KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 492
Query: 306 NIFVITPLV 314
+++ L+
Sbjct: 493 DVYTFNSLI 501
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 134/291 (46%), Gaps = 8/291 (2%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
YNV +++ + A +F +ML RK+ P TF ++ + D A+ M
Sbjct: 185 YNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMT 244
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
GC P++V T+I + ++ V+ A +L + D TF+ +I + +
Sbjct: 245 KHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN 304
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+ + + M + G P+ TY L+ + + + AK ++ + + P+ + ++TL+
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLI 360
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDLC--NLLLSMCADVGFLDEAVEIFEDIKSSG 266
++ +DA + +M + G+ D+C N L+ G + A+E+ D+++ G
Sbjct: 361 HGFVTHGRLDDAKAVLSDMVTS-YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419
Query: 267 IYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+P+ +++ L+ + K+ EA +LNEM G KPN L+ +
Sbjct: 420 C-KPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 125/295 (42%), Gaps = 35/295 (11%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP---------------- 88
A K+ + ML R PD++T+ ++N D A + F ++P
Sbjct: 306 AAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVT 365
Query: 89 ----------------GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTV 132
+G PD T ++I+ Y + V +A + + + + +
Sbjct: 366 HGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVY 425
Query: 133 TFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEM 192
+++ L+ + L D+ NV ++M G+KPN +N L+ A + + A I+ EM
Sbjct: 426 SYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREM 485
Query: 193 KRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFL 252
R G PD T+++L+ + AL + R+M + N L++ G +
Sbjct: 486 PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 545
Query: 253 DEAVEIFEDIKSSGIYQP-DESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
EA ++ ++ G P DE T++SLI +V +A ++ +M+ G P+
Sbjct: 546 KEARKLVNEMVFQG--SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS 598
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 133/318 (41%), Gaps = 3/318 (0%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIF 104
A ++ +M + KP+ ++ +++ D A +M G +P+ V +I
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 105 AYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKP 164
A+ + + A ++ + + D TF++LI +++ L + DM GV
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527
Query: 165 NLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIY 224
N TYNTL+ A R + A+ + EM G D ITY++L++ + A ++
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 225 REMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSC 284
+M + + CN+L++ G ++EAVE +++ G PD TF+SLI
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG-STPDIVTFNSLINGLCR 646
Query: 285 FAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHC 344
++ + M ++ G P+ L+ G++ G VP+
Sbjct: 647 AGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRT 706
Query: 345 CCCLLNIMTKTPMEELGK 362
LL + P E L +
Sbjct: 707 WSILLQ--SIIPQETLDR 722
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%)
Query: 14 LRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARL 73
LRD I V YN + F + + + A KL +EM+ + D +T+ ++I
Sbjct: 517 LRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCR 576
Query: 74 CSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVT 133
D+A FEKM G P ++C +I R V+ A D VT
Sbjct: 577 AGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVT 636
Query: 134 FSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMK 193
F++LI + L ++ ++ G+ P+ T+NTL+ + + A L+ +E
Sbjct: 637 FNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGI 696
Query: 194 RNGISPDYITYSTLLRAYI 212
+G P++ T+S LL++ I
Sbjct: 697 EDGFVPNHRTWSILLQSII 715
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 148/303 (48%), Gaps = 21/303 (6%)
Query: 11 LRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINC 70
+++L D ++ +N+ ++ + AEKL +ML++ P VTF +IN
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINF 353
Query: 71 ARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLD 130
+ RA++ EKMP GC+P++++ ++ + + + +D A +R + D
Sbjct: 354 LCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD 413
Query: 131 TVTFSALIKMY---GMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKL 187
VT++ ++ G +ED + LN + G P L TYNT++ + +A K A
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILN---QLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470
Query: 188 IYEEMKRNGISPDYITYSTLLRAYIGGYLRE----DALGIYREMKENRIGV---TVDLCN 240
+ +EM+ + PD ITYS+L +GG RE +A+ + E + R+G+ V +
Sbjct: 471 LLDEMRAKDLKPDTITYSSL----VGGLSREGKVDEAIKFFHEFE--RMGIRPNAVTFNS 524
Query: 241 LLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIE 300
++L +C D A++ + + G +P+E++++ LI + EA +LNE+
Sbjct: 525 IMLGLCKSRQ-TDRAIDFLVFMINRGC-KPNETSYTILIEGLAYEGMAKEALELLNELCN 582
Query: 301 SGF 303
G
Sbjct: 583 KGL 585
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 130/290 (44%), Gaps = 1/290 (0%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+++ Y + ++ + A KL DEM R PD VT+ ++N D A+++
Sbjct: 238 DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
MP GC+P+ +T ++ + AE+L + + VTF+ LI
Sbjct: 298 NDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRK 357
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
+ +++ + M G +PN +YN LL + +K A E M G PD +TY
Sbjct: 358 GLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTY 417
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
+T+L A EDA+ I ++ + N ++ A G +A+++ +++++
Sbjct: 418 NTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 477
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
+ +PD T+SSL+ S KV EA +E G +PN ++
Sbjct: 478 KDL-KPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 133/292 (45%), Gaps = 8/292 (2%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMS--DRAVE 82
+++ YNV + + K + A + D M + PD VT+ T++ LC +A+E
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILR--SLCDSGKLKQAME 225
Query: 83 WFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG 142
++M C PD +T +I A R V A +L D + D VT++ L+
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
D+ + +DM G +PN+ T+N +L ++ + + A+ + +M R G SP +
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 203 TYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDI 262
T++ L+ L A+ I +M ++ N LL +D A+E E +
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 263 KSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
S G Y PD T+++++T KV +A +LN++ G P + ++
Sbjct: 406 VSRGCY-PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 115/239 (48%), Gaps = 8/239 (3%)
Query: 78 DRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSAL 137
+ ++ E M G PD + C T+I + R+ A ++ + + D +T++ +
Sbjct: 119 EEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVM 178
Query: 138 IKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGI 197
I Y + + L+V D M V P++ TYNT+L ++ + K A + + M +
Sbjct: 179 ISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC 235
Query: 198 SPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLC--NLLLSMCADVGFLDEA 255
PD ITY+ L+ A A+ + EM++ G T D+ N+L++ G LDEA
Sbjct: 236 YPDVITYTILIEATCRDSGVGHAMKLLDEMRDR--GCTPDVVTYNVLVNGICKEGRLDEA 293
Query: 256 VEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
++ D+ SSG QP+ T + ++ + +AE +L +M+ GF P++ L+
Sbjct: 294 IKFLNDMPSSGC-QPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 142/349 (40%), Gaps = 11/349 (3%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
E V N ++ + + E K + M+ PD + T+I + +A +
Sbjct: 101 EDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKIL 160
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
E + G G PD +T +I Y + ++ A + DR D VT++ +++
Sbjct: 161 EILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSP---DVVTYNTILRSLCDS 217
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
Q + V D M P++ TY L+ A R A + +EM+ G +PD +TY
Sbjct: 218 GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTY 277
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLL-SMCADVGFLDEAVEIFEDIK 263
+ L+ ++A+ +M + V N++L SMC+ ++D A ++ D+
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD-AEKLLADML 336
Query: 264 SSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXX 323
G + P TF+ LI + A +L +M + G +PN PL+ +
Sbjct: 337 RKG-FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKM 395
Query: 324 XXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPMEELGKLIDCIEKANE 372
R + G PD +L + K GK+ D +E N+
Sbjct: 396 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKD-----GKVEDAVEILNQ 439
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 150/303 (49%), Gaps = 9/303 (2%)
Query: 19 KPTRGK---ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCS 75
K +GK ++V+YN + K K + A LF++M + +KPD T+ +I+C LC+
Sbjct: 240 KMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC--LCN 297
Query: 76 MS--DRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDR-AKTENWRLDTV 132
A M PD V +I A+ + + AE+LYD K+++ D V
Sbjct: 298 YGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVV 357
Query: 133 TFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEM 192
++ LIK + + ++ + V+ +M G+ N TY TL+ ++AR A++++++M
Sbjct: 358 AYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 417
Query: 193 KRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFL 252
+G+ PD +TY+ LL E AL ++ M++ + + + ++ G +
Sbjct: 418 VSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKV 477
Query: 253 DEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITP 312
++ ++F + G+ +P+ T++++++ + EA+A+ EM E G PN
Sbjct: 478 EDGWDLFCSLSLKGV-KPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNT 536
Query: 313 LVK 315
L++
Sbjct: 537 LIR 539
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 137/307 (44%), Gaps = 2/307 (0%)
Query: 9 VVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMI 68
+ L L +K G +V N + F A L D+M++ +PD VTF T++
Sbjct: 128 LALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLV 187
Query: 69 NCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWR 128
+ + + AV E+M GC+PD VT VI + D+A L ++ +
Sbjct: 188 HGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE 247
Query: 129 LDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLI 188
D V ++ +I + D ++++ M+ G+KP++ TYN L+ + + A +
Sbjct: 248 ADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRL 307
Query: 189 YEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREM-KENRIGVTVDLCNLLLSMCA 247
+M I+PD + ++ L+ A++ +A +Y EM K V N L+
Sbjct: 308 LSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFC 367
Query: 248 DVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNI 307
++E +E+F ++ G+ + T+++LI + A+ + +M+ G P+I
Sbjct: 368 KYKRVEEGMEVFREMSQRGLV-GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDI 426
Query: 308 FVITPLV 314
L+
Sbjct: 427 MTYNILL 433
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 134/288 (46%), Gaps = 2/288 (0%)
Query: 30 NVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPG 89
N++ KV + K + A LF +M++ + P V F+ +++ + D + E+M
Sbjct: 45 NLSRKVLQDLK-LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQN 103
Query: 90 FGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQ 149
G + T + I + R + +A + + + VT ++L+ + +
Sbjct: 104 LGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 163
Query: 150 CLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLR 209
+ + D M +G +P+ T+ TL+ +++ K A + E M G PD +TY ++
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 223
Query: 210 AYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQ 269
+ AL + +M++ +I V + N ++ +D+A ++F +++ GI +
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI-K 282
Query: 270 PDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
PD T++ LI+ + + S+A +L++M+E P++ L+ +
Sbjct: 283 PDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAF 330
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 115/234 (49%), Gaps = 7/234 (2%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINC---ARLCSMSDRAV 81
++V YN +K F K K E ++F EM QR L + VT+ T+I+ AR C D A
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC---DNAQ 411
Query: 82 EWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMY 141
F++M G PD +T ++ NV+ A +++ + + +LD VT++ +I+
Sbjct: 412 MVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEAL 471
Query: 142 GMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDY 201
+ +++ + + GVKPN+ TY T++ R A ++ EMK +G P+
Sbjct: 472 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNS 531
Query: 202 ITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEA 255
TY+TL+RA + + + +EM+ L+ +M D G LD++
Sbjct: 532 GTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHD-GRLDKS 584
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 135/305 (44%), Gaps = 6/305 (1%)
Query: 16 DKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMIN--CARL 73
D +K +V ++ + K F+ L ++M + + T++ IN C R
Sbjct: 65 DMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRR- 123
Query: 74 CSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVT 133
S A+ KM G P VT +++ + + A L D+ ++ DTVT
Sbjct: 124 -SQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVT 182
Query: 134 FSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMK 193
F+ L+ + + + + M V G +P+L TY ++ + + +P LA + +M+
Sbjct: 183 FTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME 242
Query: 194 RNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLD 253
+ I D + Y+T++ +DA ++ +M+ I V N L+S + G
Sbjct: 243 KGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWS 302
Query: 254 EAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGF-KPNIFVITP 312
+A + D+ I PD F++LI + K+ EAE + +EM++S P++
Sbjct: 303 DASRLLSDMLEKNI-NPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNT 361
Query: 313 LVKCY 317
L+K +
Sbjct: 362 LIKGF 366
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 139/289 (48%), Gaps = 7/289 (2%)
Query: 23 GKELVLYNVAMKVFKKCKD--FEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSD-- 78
G ++ Y ++ + CK+ E AE++ + + L P+ V + TMI+ C D
Sbjct: 349 GVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDG--YCRKGDLV 406
Query: 79 RAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALI 138
A E M G +PD + +I + + ++ AE+ ++ K + T++ LI
Sbjct: 407 GARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILI 466
Query: 139 KMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGIS 198
YG ++D+C ++ +M+ G PN+ +Y TL+ + + K L A+++ +M+ G+S
Sbjct: 467 GGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVS 526
Query: 199 PDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEI 258
P Y+ L+ EDA +EM + I + + N L+ + G L EA ++
Sbjct: 527 PKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDL 586
Query: 259 FEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNI 307
+I G+ +PD T++SLI+ Y V A+ EM SG KP +
Sbjct: 587 LLEISRKGL-KPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTL 634
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 150/342 (43%), Gaps = 40/342 (11%)
Query: 12 RYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCA 71
R D I+P+ L+ +N +K K E AE + EM PD TF+ + +
Sbjct: 274 RMKADHIEPS----LITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGY 329
Query: 72 RLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRA--------- 122
++ A+ +E G + +A TC+ ++ A + ++ AE + R
Sbjct: 330 SSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNE 389
Query: 123 --------------------------KTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDD 156
+ + + D + ++ LI+ + L + + +
Sbjct: 390 VIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNK 449
Query: 157 MKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYL 216
MK+ GV P++ TYN L+ R + I +EM+ NG P+ ++Y TL+ G
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 217 REDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFS 276
+A + R+M++ + V + N+L+ C G +++A +++ GI + + T++
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGI-ELNLVTYN 568
Query: 277 SLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
+LI S K+SEAE +L E+ G KP++F L+ YG
Sbjct: 569 TLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYG 610
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 125/280 (44%), Gaps = 1/280 (0%)
Query: 38 KCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAV 97
K K F +F +L+ +P + I A S + +E F +M P
Sbjct: 156 KTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVF 215
Query: 98 TCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDM 157
+I + + ++ AE+L+D +T++ LI Y + ++ V + M
Sbjct: 216 IYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERM 275
Query: 158 KVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLR 217
K ++P+L T+NTLL +++A A+ + +EMK G PD T+S L Y
Sbjct: 276 KADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKA 335
Query: 218 EDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSS 277
E ALG+Y ++ + + C++LL+ G +++A EI + G+ P+E +++
Sbjct: 336 EAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLV-PNEVIYNT 394
Query: 278 LITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+I Y + A + M + G KP+ L++ +
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRF 434
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 135/323 (41%), Gaps = 44/323 (13%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCS------------- 75
YN+ + + + +F+ + EM P+ V++ T+INC LC
Sbjct: 462 YNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINC--LCKGSKLLEAQIVKRD 519
Query: 76 MSDRAV------------------------EWFEKMPGFGCEPDAVTCATVIFAYARVEN 111
M DR V + ++M G E + VT T+I +
Sbjct: 520 MEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGK 579
Query: 112 VDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNT 171
+ AE L + + D T+++LI YG + +C+ +Y++MK G+KP L TY+
Sbjct: 580 LSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHL 639
Query: 172 LLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENR 231
L+ + L +L + EM + PD + Y+ +L Y E A + ++M E
Sbjct: 640 LISLCTKEGIELTERL-FGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKS 695
Query: 232 IGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEA 291
IG+ N L+ VG L E + +++ + + +P+ T++ ++ + A
Sbjct: 696 IGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREM-EPEADTYNIIVKGHCEVKDYMSA 754
Query: 292 EAMLNEMIESGFKPNIFVITPLV 314
EM E GF ++ + LV
Sbjct: 755 YVWYREMQEKGFLLDVCIGNELV 777
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 122/290 (42%), Gaps = 13/290 (4%)
Query: 64 FATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAK 123
+ ++N +++ S A + F + G P + + ++ + + + ++
Sbjct: 115 LSVLLNESKMIS---EAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNIL 171
Query: 124 TENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPL 183
++R + I+ L D + L +++ MK + P++ YN L+ + + ++
Sbjct: 172 ESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMN 231
Query: 184 LAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLL 243
A+ +++EM + P ITY+TL+ Y E + + MK + I ++ N LL
Sbjct: 232 DAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLL 291
Query: 244 SMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGF 303
G +++A + +++K G + PD TFS L YS K A + ++SG
Sbjct: 292 KGLFKAGMVEDAENVLKEMKDLG-FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGV 350
Query: 304 KPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVP---------DGHC 344
K N + + L+ R + G+VP DG+C
Sbjct: 351 KMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYC 400
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 105/231 (45%), Gaps = 10/231 (4%)
Query: 11 LRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINC 70
R+ ++ +K LV YN + AE L E+ ++ LKPD T+ ++I+
Sbjct: 549 FRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISG 608
Query: 71 ARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLD 130
R + +E+M G +P T +I + E +++ ERL+ + + D
Sbjct: 609 YGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEM---SLKPD 664
Query: 131 TVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYE 190
+ ++ ++ Y + D ++ N+ M + + TYN+L+ + K + + +
Sbjct: 665 LLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLID 724
Query: 191 EMKRNGISPDYITYSTLLRAY--IGGYLREDALGIYREMKENRIGVTVDLC 239
EM + P+ TY+ +++ + + Y+ A YREM+E G +D+C
Sbjct: 725 EMNAREMEPEADTYNIIVKGHCEVKDYM--SAYVWYREMQEK--GFLLDVC 771
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 142/321 (44%), Gaps = 8/321 (2%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
++ YN + + K E A + + M RKL P+ T+ +I S +A+
Sbjct: 393 VITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIK-GYCKSNVHKAMGVLN 451
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
KM PD VT ++I R N D A RL D T++++I +
Sbjct: 452 KMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSK 511
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
++ +++D ++ GV PN+ Y L+ +A K A L+ E+M P+ +T++
Sbjct: 512 RVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFN 571
Query: 206 TLLRAYIG-GYLREDALGIYREMKENRIGV--TVDLCNLLLSMCADVGFLDEAVEIFEDI 262
L+ G L+E L E K +IG+ TV +L+ G D A F+ +
Sbjct: 572 ALIHGLCADGKLKEATL---LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628
Query: 263 KSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXX 322
SSG +PD T+++ I Y ++ +AE M+ +M E+G P++F + L+K YG
Sbjct: 629 LSSGT-KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQ 687
Query: 323 XXXXXXXXXRGLDWGIVPDGH 343
R D G P H
Sbjct: 688 TNFAFDVLKRMRDTGCEPSQH 708
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 160/342 (46%), Gaps = 3/342 (0%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
YN + + + ++++ EML+ K+ P+ T+ M+N + A ++ K+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
G +PD T ++I Y + +++D A ++++ + R + V ++ LI + D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+ ++++ MK P + TY L+ ++ + + A + +EM+ GI P+ TY+ L+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIY 268
+ E A + +M E + V N L++ G +++AV++ E ++S +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL- 424
Query: 269 QPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXX 328
P+ T++ LI Y C + V +A +LN+M+E P++ L+
Sbjct: 425 SPNTRTYNELIKGY-CKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 329 XXXRGLDWGIVPDGHCCCCLLNIMTKTP-MEELGKLIDCIEK 369
D G+VPD +++ + K+ +EE L D +E+
Sbjct: 484 LLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ 525
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 133/275 (48%), Gaps = 13/275 (4%)
Query: 9 VVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMI 68
V+ + L K+ P ++V YN + + +F+ A +L M R L PD T+ +MI
Sbjct: 449 VLNKMLERKVLP----DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMI 504
Query: 69 NCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWR 128
+ + A + F+ + G P+ V +I Y + VD A + ++ ++N
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL 564
Query: 129 LDTVTFSALIKMYGMLED--YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAK 186
+++TF+ALI +G+ D + + + M +G++P + T L+ + + A
Sbjct: 565 PNSLTFNALI--HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 187 LIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNL--LLS 244
+++M +G PD TY+T ++ Y DA + +M+EN GV+ DL L+
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMREN--GVSPDLFTYSSLIK 680
Query: 245 MCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLI 279
D+G + A ++ + ++ +G +P + TF SLI
Sbjct: 681 GYGDLGQTNFAFDVLKRMRDTGC-EPSQHTFLSLI 714
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 117/264 (44%), Gaps = 19/264 (7%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIF 104
A L ++M++ L+P T +I+ D A F++M G +PDA T T I
Sbjct: 586 ATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQ 645
Query: 105 AYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKP 164
Y R + AE + + + D T+S+LIK YG L + +V M+ G +P
Sbjct: 646 TYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEP 705
Query: 165 NLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIY 224
+ T+ +L+ + + K+ G P+ S ++ + + +
Sbjct: 706 SQHTFLSLIKHLLEMKYG----------KQKGSEPELCAMSNMMEF-------DTVVELL 748
Query: 225 REMKENRIGVTV-DLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYS 283
+M E+ + L+L +C +VG L A ++F+ ++ + P E F++L++
Sbjct: 749 EKMVEHSVTPNAKSYEKLILGIC-EVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCC 807
Query: 284 CFAKVSEAEAMLNEMIESGFKPNI 307
K +EA ++++MI G P +
Sbjct: 808 KLKKHNEAAKVVDDMICVGHLPQL 831
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 6/164 (3%)
Query: 73 LCSMS-----DRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDR-AKTEN 126
LC+MS D VE EKM P+A + +I V N+ +AE+++D + E
Sbjct: 732 LCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEG 791
Query: 127 WRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAK 186
+ F+AL+ L+ +++ V DDM +G P L + L+ +Y+ +
Sbjct: 792 ISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGT 851
Query: 187 LIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKEN 230
+++ + + G D + + ++ L E ++ M++N
Sbjct: 852 SVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKN 895
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 37/290 (12%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
YNV +K + K K E A LF M + PD T+ ++ + D A +M
Sbjct: 518 YNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEML 577
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
GC+P T A +I +Y R+ G+L D
Sbjct: 578 DSGCKPGCKTYAAMIASYVRL--------------------------------GLLSD-- 603
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+++Y+ M+ GVKPN Y +L+ + A + M+ +G+ ++I ++L+
Sbjct: 604 -AVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLI 662
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIY 268
+AY E+A +Y +MK++ G V N +LS+CAD+G + EA IF ++ G
Sbjct: 663 KAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTC 722
Query: 269 QPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
D +F++++ +Y + EA + EM ESG + ++ CY
Sbjct: 723 --DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYA 770
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 143/328 (43%), Gaps = 36/328 (10%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+ V +N + AE L +M ++ + PD T+ +++ + A+E++
Sbjct: 339 DTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYY 398
Query: 85 EKMPGFGCEPDAVTCATVIF------AYARVENVD----------------------MAE 116
K+ G PD VT V+ A VE V + E
Sbjct: 399 RKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNE 458
Query: 117 RLYDRAKT--ENWRLDTV----TFSALIKMYGMLEDYDQCLNV-YDDMKVLGVKPNLGTY 169
L +AK E ++LD V T +A+I +Y + + V Y + G + ++ Y
Sbjct: 459 GLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEY 518
Query: 170 NTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKE 229
N ++ A +A+ A +++ MK G PD TY++L + G L ++A I EM +
Sbjct: 519 NVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLD 578
Query: 230 NRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVS 289
+ +++ +G L +AV+++E ++ +G+ +P+E + SLI ++ V
Sbjct: 579 SGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGV-KPNEVVYGSLINGFAESGMVE 637
Query: 290 EAEAMLNEMIESGFKPNIFVITPLVKCY 317
EA M E G + N V+T L+K Y
Sbjct: 638 EAIQYFRMMEEHGVQSNHIVLTSLIKAY 665
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 133/336 (39%), Gaps = 40/336 (11%)
Query: 20 PTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDR 79
P + + +N + ++ K A LF EML+ + D VTF TMI+
Sbjct: 299 PRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSE 358
Query: 80 AVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIK 139
A +KM G PD T ++ +A +++ A Y + + DTVT A++
Sbjct: 359 AESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLH 418
Query: 140 MYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEM------- 192
+ + + V +M ++ + + ++ + AK ++E
Sbjct: 419 ILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLS 478
Query: 193 --------------------------KRN--GISPDYITYSTLLRAYIGGYLREDALGIY 224
KRN G D + Y+ +++AY L E AL ++
Sbjct: 479 STTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLF 538
Query: 225 REMKENRIGVTVDLC--NLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVY 282
+ MK G D C N L M A V +DEA I ++ SG +P T++++I Y
Sbjct: 539 KGMKNQ--GTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGC-KPGCKTYAAMIASY 595
Query: 283 SCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
+S+A + M ++G KPN V L+ +
Sbjct: 596 VRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFA 631
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 126/269 (46%), Gaps = 3/269 (1%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMI-NCARLCSMSDRAVEWFEKM 87
YN ++ + A+++ EML KP T+A MI + RL +SD AV+ +E M
Sbjct: 553 YNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSD-AVDLYEAM 611
Query: 88 PGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDY 147
G +P+ V ++I +A V+ A + + + + + + ++LIK Y +
Sbjct: 612 EKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCL 671
Query: 148 DQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTL 207
++ VYD MK P++ N++L A+ I+ ++ G + D I+++T+
Sbjct: 672 EEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG-TCDVISFATM 730
Query: 208 LRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGI 267
+ Y G + ++A+ + EM+E+ + N +++ A G L E E+F ++
Sbjct: 731 MYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERK 790
Query: 268 YQPDESTFSSLITVYSCFAKVSEAEAMLN 296
D TF +L T+ SEA + L
Sbjct: 791 LLLDWGTFKTLFTLLKKGGVPSEAVSQLQ 819
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 132/312 (42%), Gaps = 44/312 (14%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIF 104
A L++ M + +KP+ V + ++IN M + A+++F M G + + + ++I
Sbjct: 604 AVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIK 663
Query: 105 AYARVENVDMAERLYDRAK----------------------------------TENWRLD 130
AY++V ++ A R+YD+ K E D
Sbjct: 664 AYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCD 723
Query: 131 TVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPL--LAKLI 188
++F+ ++ +Y + D+ + V ++M+ G+ + ++N ++ A Y A L +L
Sbjct: 724 VISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVM-ACYAADGQLSECCELF 782
Query: 189 YEEMKRNGISPDYITYSTLLRAYIGGYLREDALG-IYREMKENRIGVTVDLCNLLLSMCA 247
+E + + D+ T+ TL G + +A+ + E + T + L S
Sbjct: 783 HEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSA-- 840
Query: 248 DVGFLDEAVEIFEDIKSSGIYQPDES-TFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
+G A+E +++ S I P E ++++I YS + A M E G +P+
Sbjct: 841 -MGLYAYALESCQELTSGEI--PREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPD 897
Query: 307 IFVITPLVKCYG 318
I LV YG
Sbjct: 898 IVTQAYLVGIYG 909
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 154/378 (40%), Gaps = 45/378 (11%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
++ YN+ +++ K + + L+DEM+++ +KP N T+ T+I+ + A+ W
Sbjct: 187 VIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLG 246
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDR---------------AKTENWRLD 130
KM G +PD VT V+ Y + AE + + + T N +D
Sbjct: 247 KMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMID 306
Query: 131 --------------------------TVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKP 164
TVTF+ +I +YG + ++ MK L P
Sbjct: 307 TYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK-LHCAP 365
Query: 165 NLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIY 224
+ TYN L+ + A ++EMK +G+ PD ++Y TLL A+ ++ E+A G+
Sbjct: 366 DTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLI 425
Query: 225 REMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSC 284
EM ++ + + + L M + L+++ F+ +G +S+ I Y
Sbjct: 426 AEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAG--NMSSEGYSANIDAYGE 483
Query: 285 FAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHC 344
+SEAE + E K + ++K YG + +G+ PD
Sbjct: 484 RGYLSEAERVFICCQEVN-KRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCT 542
Query: 345 CCCLLNIMTKTPMEELGK 362
L+ I+ M G+
Sbjct: 543 YNTLVQILASADMPHKGR 560
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 136/296 (45%), Gaps = 40/296 (13%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEW 83
+ ++ YNV +K + K E A +LF+ M+ + PD T+ T++ M + +
Sbjct: 503 RTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCY 562
Query: 84 FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGM 143
EKM G D + VI ++ ++ ++MAE +Y N D V + LI +
Sbjct: 563 LEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFAD 622
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLP------------AVYR------------- 178
+ Q ++ + MK G+ N YN+L+ A+YR
Sbjct: 623 TGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPD 682
Query: 179 -----------ARKPLL--AKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYR 225
+ + ++ A+ I++ MK+ G + ++ T++ +L Y E+A I +
Sbjct: 683 VYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEF-TFAMMLCMYKKNGRFEEATQIAK 741
Query: 226 EMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITV 281
+M+E +I N +L + A G EAVE F+++ SSGI QPD+STF SL T+
Sbjct: 742 QMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGI-QPDDSTFKSLGTI 796
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 159/395 (40%), Gaps = 108/395 (27%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMI----NCARLCSMS------- 77
YN + + K + A + F ML+ + P VTF TMI N +L ++
Sbjct: 301 YNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK 360
Query: 78 -----------------------DRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDM 114
+RA +F++M G +PD V+ T+++A++ V+
Sbjct: 361 LHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEE 420
Query: 115 AERLYDRAKTENWRLDTVTFSALIKMY---GMLE---DYDQCLNVYDDMKVLGVKPNLGT 168
AE L +N +D T SAL +MY MLE + + +V +M G N+
Sbjct: 421 AEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDA 480
Query: 169 ---------------------------YNTLLPAVYRARKPLLAKLIYEEMKRNGISPDY 201
YN ++ A ++ A ++E M G++PD
Sbjct: 481 YGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDK 540
Query: 202 ITYSTLLR-------------------------------AYIGGYLREDALG----IYRE 226
TY+TL++ A I +++ L +Y+E
Sbjct: 541 CTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKE 600
Query: 227 MKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDEST-FSSLITVYSCF 285
M E I V + +L++ AD G + +A+ E +K +GI P S ++SLI +Y+
Sbjct: 601 MVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGI--PGNSVIYNSLIKLYTKV 658
Query: 286 AKVSEAEAMLNEMIESGFK---PNIFVITPLVKCY 317
+ EAEA+ ++++S K P+++ ++ Y
Sbjct: 659 GYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLY 693
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 9/161 (5%)
Query: 165 NLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIY 224
N+ YN +L + +A K + +++EM R GI P TY TL+ Y G L+ AL
Sbjct: 186 NVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWL 245
Query: 225 REMKENRIGVTVD--LCNLLLSMCADVGFLDEAVEIF-----EDIKSSGIYQPDESTFSS 277
+M ++IG+ D ++L M +A E F ++ K+ T+++
Sbjct: 246 GKM--SKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNT 303
Query: 278 LITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
+I Y ++ EA M+E G P ++ YG
Sbjct: 304 MIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYG 344
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 82/178 (46%), Gaps = 7/178 (3%)
Query: 127 WRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAK 186
+ L+ + ++ ++++ G + +++D+M G+KP TY TL+ + + A
Sbjct: 183 YELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHAL 242
Query: 187 LIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMK--ENRIGVTVDLC----N 240
+M + G+ PD +T +L+ Y + A +++ EN+ V L N
Sbjct: 243 CWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYN 302
Query: 241 LLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEM 298
++ G + EA E F+ + GI P TF+++I +Y ++ E +++ M
Sbjct: 303 TMIDTYGKSGQIKEASETFKRMLEEGIV-PTTVTFNTMIHIYGNNGQLGEVTSLMKTM 359
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 142/329 (43%), Gaps = 44/329 (13%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++V N + F A L D+M++ KPD VTF T+I+ L + + AV
Sbjct: 147 DIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALI 206
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
++M GC+PD VT V+ + + D+A L ++ + + V +S +I
Sbjct: 207 DRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKY 266
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLP------------------------------ 174
D LN++ +M+ GV+PN+ TY++L+
Sbjct: 267 RHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTF 326
Query: 175 -----AVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKE 229
A + K + A+ +YEEM + I P+ TYS+L I G+ D LG ++M E
Sbjct: 327 SALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSL----INGFCMLDRLGEAKQMLE 382
Query: 230 NRIGV----TVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCF 285
I V N L++ +D+ +E+F ++ G+ + T+++LI +
Sbjct: 383 LMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLV-GNTVTYTTLIHGFFQA 441
Query: 286 AKVSEAEAMLNEMIESGFKPNIFVITPLV 314
A+ + +M+ G PNI L+
Sbjct: 442 RDCDNAQMVFKQMVSVGVHPNILTYNILL 470
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%)
Query: 12 RYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCA 71
R L D I+ LV ++ + F K AEKL++EM++R + P+ T++++IN
Sbjct: 309 RLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGF 368
Query: 72 RLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDT 131
+ A + E M C P+ VT T+I + + + VD L+ +T
Sbjct: 369 CMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNT 428
Query: 132 VTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEE 191
VT++ LI + D D V+ M +GV PN+ TYN LL + + K A +++E
Sbjct: 429 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 488
Query: 192 MKRNGISPDYITYSTLLRA 210
++R+ + PD TY+ ++
Sbjct: 489 LQRSTMEPDIYTYNIMIEG 507
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 119/255 (46%), Gaps = 1/255 (0%)
Query: 63 TFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRA 122
T+ +INC CS A+ KM G EPD VT +++ + + A L D+
Sbjct: 115 TYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQM 174
Query: 123 KTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKP 182
++ DTVTF+ LI + + + + D M G +P+L TY ++ + +
Sbjct: 175 VEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDT 234
Query: 183 LLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLL 242
LA + +M+ I + + YST++ + +DAL ++ EM+ + V + L
Sbjct: 235 DLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 294
Query: 243 LSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESG 302
+S + G +A + D+ I P+ TFS+LI + K+ +AE + EMI+
Sbjct: 295 ISCLCNYGRWSDASRLLSDMIERKI-NPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRS 353
Query: 303 FKPNIFVITPLVKCY 317
PNIF + L+ +
Sbjct: 354 IDPNIFTYSSLINGF 368
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 141/315 (44%), Gaps = 3/315 (0%)
Query: 3 NSETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNV 62
N+ T P+ + R + GK Y ++ + + A LF M Q + P +
Sbjct: 22 NAATFPLSFSFCRRR--AFSGKTSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSII 79
Query: 63 TFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRA 122
F+ +++ + D + + EKM G + T +I + R + +A L +
Sbjct: 80 EFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKM 139
Query: 123 KTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKP 182
+ D VT ++L+ + + + D M +G KP+ T+ TL+ ++ K
Sbjct: 140 MKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKA 199
Query: 183 LLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLL 242
A + + M + G PD +TY ++ + AL + +M+ +I V + + +
Sbjct: 200 SEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTV 259
Query: 243 LSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESG 302
+ D+A+ +F ++++ G+ +P+ T+SSLI+ + + S+A +L++MIE
Sbjct: 260 IDSLCKYRHEDDALNLFTEMENKGV-RPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318
Query: 303 FKPNIFVITPLVKCY 317
PN+ + L+ +
Sbjct: 319 INPNLVTFSALIDAF 333
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 129/257 (50%), Gaps = 5/257 (1%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMS--DRAVE 82
+V+Y+ + K + + A LF EM + ++P+ +T++++I+C LC+ A
Sbjct: 252 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC--LCNYGRWSDASR 309
Query: 83 WFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG 142
M P+ VT + +I A+ + + AE+LY+ + + T+S+LI +
Sbjct: 310 LLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFC 369
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
ML+ + + + M PN+ TYNTL+ +A++ ++ EM + G+ + +
Sbjct: 370 MLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV 429
Query: 203 TYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDI 262
TY+TL+ + ++A ++++M + + N+LL G L +A+ +FE +
Sbjct: 430 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 489
Query: 263 KSSGIYQPDESTFSSLI 279
+ S + +PD T++ +I
Sbjct: 490 QRSTM-EPDIYTYNIMI 505
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 131/271 (48%), Gaps = 4/271 (1%)
Query: 48 LFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYA 107
L M ++ P TFA + D+AV+ F M GC D + T++
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 108 RVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLG 167
+ + V+ A L+ RA + +DTVT++ ++ + +++ + L V +M G+ PNL
Sbjct: 173 KSKRVEKAYELF-RALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 168 TYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAY-IGGYLREDALGIYRE 226
TYNT+L +RA + A + EMK+ D +TY+T++ + + G ++ A ++ E
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKR-ARNVFDE 290
Query: 227 MKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFA 286
M + +V N ++ + ++ AV +FE++ G Y+P+ +T++ LI
Sbjct: 291 MIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG-YEPNVTTYNVLIRGLFHAG 349
Query: 287 KVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ S E ++ M G +PN +++ Y
Sbjct: 350 EFSRGEELMQRMENEGCEPNFQTYNMMIRYY 380
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 129/259 (49%), Gaps = 6/259 (2%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEW 83
++L +N + V K K E A +LF L+ + D VT+ ++N L + +A+E
Sbjct: 159 QDLASFNTILDVLCKSKRVEKAYELF-RALRGRFSVDTVTYNVILNGWCLIKRTPKALEV 217
Query: 84 FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGM 143
++M G P+ T T++ + R + A + K + +D VT++ ++ +G+
Sbjct: 218 LKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGV 277
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYIT 203
+ + NV+D+M GV P++ TYN ++ + + A +++EEM R G P+ T
Sbjct: 278 AGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTT 337
Query: 204 YSTLLRA--YIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFED 261
Y+ L+R + G + R + L + M+ N+++ ++ +++A+ +FE
Sbjct: 338 YNVLIRGLFHAGEFSRGEEL--MQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEK 395
Query: 262 IKSSGIYQPDESTFSSLIT 280
+ SG P+ T++ LI+
Sbjct: 396 M-GSGDCLPNLDTYNILIS 413
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 114/240 (47%), Gaps = 4/240 (1%)
Query: 5 ETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTF 64
E A + R LR + + V YNV + + K A ++ EM++R + P+ T+
Sbjct: 178 EKAYELFRALRGRF----SVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTY 233
Query: 65 ATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKT 124
TM+ A E+F +M CE D VT TV+ + + A ++D
Sbjct: 234 NTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIR 293
Query: 125 ENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLL 184
E T++A+I++ ++ + + ++++M G +PN+ TYN L+ ++ A +
Sbjct: 294 EGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSR 353
Query: 185 AKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLS 244
+ + + M+ G P++ TY+ ++R Y E ALG++ +M +D N+L+S
Sbjct: 354 GEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILIS 413
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 4/155 (2%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSD--RAVE 82
++V Y + F + + A +FDEM++ + P T+ MI LC + AV
Sbjct: 264 DVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQV--LCKKDNVENAVV 321
Query: 83 WFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG 142
FE+M G EP+ T +I E L R + E + T++ +I+ Y
Sbjct: 322 MFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYS 381
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVY 177
+ ++ L +++ M PNL TYN L+ ++
Sbjct: 382 ECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMF 416
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 137/289 (47%), Gaps = 3/289 (1%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQ-RKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
V +N+++K K + E + E++ PD VT+ T+I A+E
Sbjct: 381 VTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMR 440
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
+M G + + +T T++ A + +D A L + A + +D VT+ LI + E
Sbjct: 441 EMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREE 500
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
++ L ++D+MK + + P + T+N+L+ + K LA ++E+ +G+ PD T++
Sbjct: 501 KVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFN 560
Query: 206 TLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSS 265
+++ Y E A Y E ++ CN+LL+ G ++A+ F +
Sbjct: 561 SIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEE 620
Query: 266 GIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
+ D T++++I+ + K+ EA +L+EM E G +P+ F +
Sbjct: 621 --REVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFI 667
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 155/385 (40%), Gaps = 79/385 (20%)
Query: 52 MLQR-----KLKPDNVTFATMINC-ARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFA 105
ML+R K+ PDNVT+ T++ ++ +SD E M G P+ VT +++
Sbjct: 226 MLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLK-ELLLDMKKNGLVPNRVTYNNLVYG 284
Query: 106 YARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPN 165
Y ++ ++ A ++ + K N D T++ LI + L + D MK L ++P+
Sbjct: 285 YCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPD 344
Query: 166 LGTYNTLLPAVYRARKPLLAKLIYEEMKRNGI---------------------------- 197
+ TYNTL+ + L A+ + E+M+ +G+
Sbjct: 345 VVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVK 404
Query: 198 --------SPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGV-TVDLCNLLLSMCAD 248
SPD +TY TL++AY+ AL + REM + I + T+ L +L ++C +
Sbjct: 405 ELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKE 464
Query: 249 -----------------------------VGFLDE-----AVEIFEDIKSSGIYQPDEST 274
+GF E A+E+++++K I P ST
Sbjct: 465 RKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKI-TPTVST 523
Query: 275 FSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGL 334
F+SLI K A +E+ ESG P+ ++ Y +
Sbjct: 524 FNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESI 583
Query: 335 DWGIVPDGHCCCCLLNIMTKTPMEE 359
PD + C LLN + K M E
Sbjct: 584 KHSFKPDNYTCNILLNGLCKEGMTE 608
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 118/236 (50%), Gaps = 15/236 (6%)
Query: 80 AVEWFEKMPGFGCEPDAVTCATVIFAYARVEN---VDMAERLYDRAKTENWRLDTVTFSA 136
A++ F+KM +P+ +TC T++ R + + A ++D L+ TF+
Sbjct: 150 ALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNV 209
Query: 137 LIKMYGMLEDYDQCLNVYDDM-KVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRN 195
L+ Y + + L + + M V P+ TYNT+L A+ + + K + +MK+N
Sbjct: 210 LVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKN 269
Query: 196 GISPDYITYSTLLRAYIG-GYLREDALGIYREMKENRIGVTVDLC--NLLLSMCADVGFL 252
G+ P+ +TY+ L+ Y G L+E A I MK+ V DLC N+L++ + G +
Sbjct: 270 GLVPNRVTYNNLVYGYCKLGSLKE-AFQIVELMKQT--NVLPDLCTYNILINGLCNAGSM 326
Query: 253 DEAVEIFEDIKSSGIYQPDESTFSSLITVYSCF--AKVSEAEAMLNEMIESGFKPN 306
E +E+ + +KS + QPD T+++LI CF EA ++ +M G K N
Sbjct: 327 REGLELMDAMKSLKL-QPDVVTYNTLID--GCFELGLSLEARKLMEQMENDGVKAN 379
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 77/157 (49%), Gaps = 3/157 (1%)
Query: 164 PNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRA---YIGGYLREDA 220
P+ ++ L A KP +A I+++M R + P+ +T +TLL Y + A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 221 LGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLIT 280
++ +M + + + V N+L++ G L++A+ + E + S PD T+++++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 281 VYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
S ++S+ + +L +M ++G PN LV Y
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGY 285
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 142/292 (48%), Gaps = 1/292 (0%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
+V YN ++ K + L +M+ R++ P+ +TF +++ A E ++
Sbjct: 263 VVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYK 322
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
+M G P+ +T T++ Y + A + D D VTF++LIK Y M++
Sbjct: 323 EMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVK 382
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
D + V+ ++ G+ N TY+ L+ ++ K LA+ +++EM +G+ PD +TY
Sbjct: 383 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 442
Query: 206 TLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSS 265
LL E AL I+ +++++++ + + + ++ G +++A +F +
Sbjct: 443 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 502
Query: 266 GIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
G+ +P+ T++ +I+ +SEA +L +M E G PN L++ +
Sbjct: 503 GV-KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 163/363 (44%), Gaps = 3/363 (0%)
Query: 30 NVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPG 89
N+ + F +C A + ++++ +PD TF T+I L AV ++M
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186
Query: 90 FGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQ 149
GC+PD VT +++ R + +A L + + N + D T+S +I D
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 150 CLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLR 209
++++ +M+ G+K ++ TYN+L+ + +A K L+ ++M I P+ IT++ LL
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 210 AYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQ 269
++ ++A +Y+EM I + N L+ L EA + D+
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML-DLMVRNKCS 365
Query: 270 PDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXX 329
PD TF+SLI Y +V + + + + G N + LV+ +
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 330 XXRGLDWGIVPDGHCCCCLLN-IMTKTPMEELGKLIDCIEKANEELGSVV-RYLVEGQEE 387
+ G++PD LL+ + +E+ ++ + ++K+ +LG V+ ++EG +
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 388 GDQ 390
G +
Sbjct: 486 GGK 488
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 134/293 (45%), Gaps = 1/293 (0%)
Query: 14 LRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARL 73
L+D + ++ +NV + VF K + A +L+ EM+ R + P+ +T+ T+++ +
Sbjct: 286 LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM 345
Query: 74 CSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVT 133
+ A + M C PD VT ++I Y V+ VD +++ + VT
Sbjct: 346 QNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVT 405
Query: 134 FSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMK 193
+S L++ + ++ +M GV P++ TY LL + K A I+E+++
Sbjct: 406 YSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465
Query: 194 RNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLD 253
++ + + Y+T++ G EDA ++ + + V +++S G L
Sbjct: 466 KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLS 525
Query: 254 EAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
EA + ++ G P++ T+++LI + ++ + ++ EM GF +
Sbjct: 526 EANILLRKMEEDG-NAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 123/275 (44%), Gaps = 1/275 (0%)
Query: 43 EGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATV 102
+ A LF EM++ + P V F+ + + +++ +++ G + T +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 103 IFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGV 162
I + R A + + + DT TF+ LIK + + + + D M G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 163 KPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALG 222
+P++ TYN+++ + R+ LA + +M+ + D TYST++ + + A+
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 223 IYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVY 282
+++EM+ I +V N L+ G ++ + +D+ S I P+ TF+ L+ V+
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV-PNVITFNVLLDVF 308
Query: 283 SCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
K+ EA + EMI G PNI L+ Y
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGY 343
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 163/389 (41%), Gaps = 38/389 (9%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++V YN + + E A +L + M + P T+ T+IN +RA E F
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
+M G PD+ T +++ + +V E+++ ++ + D V FS+++ ++
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRS 388
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
+ D+ L ++ +K G+ P+ Y L+ R +A + EM + G + D +TY
Sbjct: 389 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTY 448
Query: 205 STLLRA-------------------------------YIGGYLR----EDALGIYREMKE 229
+T+L I G+ + ++A+ ++++MKE
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKE 508
Query: 230 NRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVS 289
RI + V N LL VG +D A EI+ D+ S I P ++S L+ ++
Sbjct: 509 KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL-PTPISYSILVNALCSKGHLA 567
Query: 290 EAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLL 349
EA + +EMI KP + + ++K Y + + G VPD C
Sbjct: 568 EAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPD--CISYNT 625
Query: 350 NIMTKTPMEELGKLIDCIEKANEELGSVV 378
I E + K ++K EE G +V
Sbjct: 626 LIYGFVREENMSKAFGLVKKMEEEQGGLV 654
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 139/288 (48%), Gaps = 11/288 (3%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++V YN + K K A+KLF+EM +R L PD+ T +I+ A+E F
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
+KM D VT T++ + +V ++D A+ ++ ++ +++S L+
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSK 563
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
+ V+D+M +KP + N+++ R+ + E+M G PD I+Y
Sbjct: 564 GHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISY 623
Query: 205 STLLRAYIGGYLRED----ALGIYREMKENRIGVTVDLC--NLLLSMCADVGFLDEAVEI 258
+TL I G++RE+ A G+ ++M+E + G+ D+ N +L + EA +
Sbjct: 624 NTL----IYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVV 679
Query: 259 FEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
+ G+ PD ST++ +I + ++EA + +EM++ GF P+
Sbjct: 680 LRKMIERGV-NPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 147/329 (44%), Gaps = 5/329 (1%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+LV ++ M +F + + + A F+ + + L PDNV + +I M A+
Sbjct: 374 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR 433
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
+M GC D VT T++ + + + A++L++ D+ T + LI + L
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKL 493
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
+ + ++ MK ++ ++ TYNTLL + AK I+ +M I P I+Y
Sbjct: 494 GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISY 553
Query: 205 STLLRAYIG-GYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIK 263
S L+ A G+L E A ++ EM I TV +CN ++ G + E +
Sbjct: 554 SILVNALCSKGHLAE-AFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 264 SSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIE--SGFKPNIFVITPLVKCYGXXX 321
S G + PD ++++LI + +S+A ++ +M E G P++F ++ +
Sbjct: 613 SEG-FVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671
Query: 322 XXXXXXXXXXRGLDWGIVPDGHCCCCLLN 350
+ ++ G+ PD C++N
Sbjct: 672 QMKEAEVVLRKMIERGVNPDRSTYTCMIN 700
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 127/298 (42%), Gaps = 3/298 (1%)
Query: 23 GKELVLYNVAMKVFKKCKD--FEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRA 80
G + +Y + + V CKD E ++ ++ + PD VT+ T+I+ + + A
Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEA 289
Query: 81 VEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKM 140
E MPG G P T TVI + + A+ ++ D+ T+ +L+
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 141 YGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPD 200
D + V+ DM+ V P+L +++++ R+ A + + +K G+ PD
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 409
Query: 201 YITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFE 260
+ Y+ L++ Y + A+ + EM + + V N +L L EA ++F
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN 469
Query: 261 DIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
++ ++ PD T + LI + + A + +M E + ++ L+ +G
Sbjct: 470 EMTERALF-PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG 526
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 1/189 (0%)
Query: 153 VYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYI 212
VY ++ GV N+ T N ++ A+ + K +++ G+ PD +TY+TL+ AY
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281
Query: 213 GGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDE 272
L E+A + M V N +++ G + A E+F ++ SG+ PD
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGL-SPDS 340
Query: 273 STFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXR 332
+T+ SL+ V E E + ++M P++ + ++ +
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 400
Query: 333 GLDWGIVPD 341
+ G++PD
Sbjct: 401 VKEAGLIPD 409
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 108/263 (41%), Gaps = 7/263 (2%)
Query: 95 DAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVY 154
DA +C + + V +++ L D + D+V F LI+ Y + +
Sbjct: 131 DAQSCLLRMIRRSGVSRLEIVNSL-DSTFSNCGSNDSV-FDLLIRTYVQARKLREAHEAF 188
Query: 155 DDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGG 214
++ G ++ N L+ ++ R LA +Y+E+ R+G+ + T + ++ A
Sbjct: 189 TLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKD 248
Query: 215 YLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDEST 274
E +++E + + N L+S + G ++EA E+ + G + P T
Sbjct: 249 GKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG-FSPGVYT 307
Query: 275 FSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV--KCYGXXXXXXXXXXXXXR 332
++++I K A+ + EM+ SG P+ L+ C R
Sbjct: 308 YNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMR 367
Query: 333 GLDWGIVPDGHCCCCLLNIMTKT 355
D +VPD C ++++ T++
Sbjct: 368 SRD--VVPDLVCFSSMMSLFTRS 388
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 156/371 (42%), Gaps = 43/371 (11%)
Query: 18 IKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMS 77
IKPT +V YN ++ F EGA + EM + +PD T+ ++ + +C+
Sbjct: 256 IKPT----IVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPIL--SWMCN-E 308
Query: 78 DRAVEWFEKMPGFGCEPDAVTCATVI------------FAYAR----------------- 108
RA E +M G PD+V+ +I FAY
Sbjct: 309 GRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTL 368
Query: 109 -----VEN-VDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGV 162
+EN ++ AE L + + LD+VT++ LI Y D + ++D+M G+
Sbjct: 369 IHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGI 428
Query: 163 KPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALG 222
+P TY +L+ + R K A ++E++ G+ PD + +TL+ + + A
Sbjct: 429 QPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFS 488
Query: 223 IYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVY 282
+ +EM I N L+ G +EA E+ ++K GI +PD ++++LI+ Y
Sbjct: 489 LLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGI-KPDHISYNTLISGY 547
Query: 283 SCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDG 342
S A + +EM+ GF P + L+K GIVP+
Sbjct: 548 SKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPND 607
Query: 343 HCCCCLLNIMT 353
C ++ M+
Sbjct: 608 SSFCSVIEAMS 618
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 114/235 (48%), Gaps = 8/235 (3%)
Query: 1 MENS-ETAPVVLRYLRDKIKPTRGKEL--VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKL 57
MEN E A +++R +R+K G L V YN+ + + + D + A L DEM+ +
Sbjct: 374 MENKIEAAEILIREIREK-----GIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGI 428
Query: 58 KPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAER 117
+P T+ ++I + + A E FEK+ G G +PD V T++ + + N+D A
Sbjct: 429 QPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFS 488
Query: 118 LYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVY 177
L + D VT++ L++ +++ + +MK G+KP+ +YNTL+
Sbjct: 489 LLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYS 548
Query: 178 RARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRI 232
+ A ++ +EM G +P +TY+ LL+ E A + REMK I
Sbjct: 549 KKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGI 603
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 127/278 (45%), Gaps = 17/278 (6%)
Query: 48 LFDEML---QRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIF 104
LFDE++ R + F ++ C M D A+E F M G P TC ++
Sbjct: 139 LFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILT 198
Query: 105 AYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMY---GMLEDYDQCLNVYDDMKVLG 161
+R+ ++ A Y + + TF+ +I + G L+ L + M+V G
Sbjct: 199 LLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGI---MEVFG 255
Query: 162 VKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDAL 221
+KP + TYNTL+ + A+LI EMK G PD TY+ +L +++ R A
Sbjct: 256 IKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPIL-SWMCNEGR--AS 312
Query: 222 GIYREMKENRIGVTVDLC--NLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLI 279
+ REMKE IG+ D N+L+ C++ G L+ A +++ G+ P T+++LI
Sbjct: 313 EVLREMKE--IGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMV-PTFYTYNTLI 369
Query: 280 TVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
K+ AE ++ E+ E G + L+ Y
Sbjct: 370 HGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGY 407
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 160/346 (46%), Gaps = 27/346 (7%)
Query: 14 LRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARL 73
L++ ++ L +N+ + F K + G+ K+F EML + +KP+ +++ ++IN L
Sbjct: 284 LKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLING--L 341
Query: 74 CSMS--DRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDT 131
C+ A+ +KM G +P+ +T +I + + + + A ++ K + T
Sbjct: 342 CNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTT 401
Query: 132 VTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEE 191
++ LI Y L D + ++M+ G+ P++GTYN L+ + R AK ++++
Sbjct: 402 RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ 461
Query: 192 MKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGF 251
+ G+ PD +T+ L+ Y A + +EM + + N+++ G
Sbjct: 462 LTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGN 520
Query: 252 LDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVIT 311
L A + ++ + + ++++ L+ YS K+ +A +LNEM+E G PN +
Sbjct: 521 LKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPN-RITY 579
Query: 312 PLVKCYGXXXXXXXXXXXXXRGLDWGIVPD--GHCCCCLLNIMTKT 355
+VK +D G VPD GH L N+ TK+
Sbjct: 580 EIVK---------------EEMVDQGFVPDIEGH----LFNVSTKS 606
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 135/276 (48%), Gaps = 5/276 (1%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIF 104
E ++ EM++RK++P+ TF +IN ++A + E M +GC P+ V+ T+I
Sbjct: 207 VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLID 266
Query: 105 AYARVE-NVDM--AERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLG 161
Y ++ N M A+ + + + TF+ LI + ++ + V+ +M
Sbjct: 267 GYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQD 326
Query: 162 VKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDAL 221
VKPN+ +YN+L+ + K A + ++M G+ P+ ITY+ L+ + + ++AL
Sbjct: 327 VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEAL 386
Query: 222 GIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITV 281
++ +K T + N+L+ +G +D+ + E+++ GI PD T++ LI
Sbjct: 387 DMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV-PDVGTYNCLIAG 445
Query: 282 YSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ A+ + +++ G P++ L++ Y
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGY 480
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 128/292 (43%), Gaps = 13/292 (4%)
Query: 82 EWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMY 141
E F++ +G + A++C ++ A + E +Y + + TF+ +I
Sbjct: 174 EAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINAL 233
Query: 142 GMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYR---ARKPLLAKLIYEEMKRNGIS 198
++ +V +DMKV G PN+ +YNTL+ + K A + +EM N +S
Sbjct: 234 CKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVS 293
Query: 199 PDYITYSTLLRAYIGGYLRED----ALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDE 254
P+ T++ L I G+ ++D ++ +++EM + + V N L++ + G + E
Sbjct: 294 PNLTTFNIL----IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISE 349
Query: 255 AVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
A+ + + + S+G+ QP+ T+++LI + + EA M + G P + L+
Sbjct: 350 AISMRDKMVSAGV-QPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLI 408
Query: 315 KCYGXXXXXXXXXXXXXRGLDWGIVPD-GHCCCCLLNIMTKTPMEELGKLID 365
Y GIVPD G C + + +E KL D
Sbjct: 409 DAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFD 460
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 143/301 (47%), Gaps = 2/301 (0%)
Query: 16 DKIKPTRGK-ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLC 74
++IK R K V+YN + F K E AE L M + +PD VT+ ++N
Sbjct: 209 EEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDN 268
Query: 75 SMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTF 134
+M RA +M G + DA + ++ + RV + D + D V++
Sbjct: 269 NMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSY 328
Query: 135 SALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKR 194
S LI+ + + + ++++M+ G+ N+ TY +L+ A R +AK + ++M
Sbjct: 329 STLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTE 388
Query: 195 NGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDE 254
G+SPD I Y+T+L + A G++ +M E+ I N L+S G + E
Sbjct: 389 LGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTE 448
Query: 255 AVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
A+++FED+K PDE TF +I K+S A + ++M++ GF + V L+
Sbjct: 449 AIKLFEDMKGKEC-CPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLI 507
Query: 315 K 315
K
Sbjct: 508 K 508
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 131/288 (45%), Gaps = 5/288 (1%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
+NV + + + A + F M+QR +PD V++ +IN AVE + M
Sbjct: 117 FNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMI 176
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMA-ERLYDRAKTENWRLDTVTFSALIKMYGMLEDY 147
G PD CA ++ VD+A E + + K+ +L TV ++ALI +
Sbjct: 177 RSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRI 236
Query: 148 DQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTL 207
++ + M +G +P+L TYN LL Y A+ + EM R+GI D +Y+ L
Sbjct: 237 EKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQL 296
Query: 208 LRAYIGGYLREDALG-IYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSG 266
L+ + + + +EM+ V L+ + C +A +FE+++ G
Sbjct: 297 LKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCR-ASNTRKAYRLFEEMRQKG 355
Query: 267 IYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN-IFVITPL 313
+ + T++SLI + S A+ +L++M E G P+ IF T L
Sbjct: 356 MVM-NVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTIL 402
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 106/243 (43%), Gaps = 2/243 (0%)
Query: 76 MSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFS 135
M D AV+ F++M + I R ++AE +Y K + L T+S
Sbjct: 24 MIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYS 83
Query: 136 ALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRN 195
I ++ +D + DM+ LG P++ +N L + R K A + M +
Sbjct: 84 RFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQR 143
Query: 196 GISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEA 255
G PD ++Y+ L+ DA+ I+ M + + C L+ +D A
Sbjct: 144 GREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLA 203
Query: 256 VE-IFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
E + E+IKS+ + + +++LI+ + ++ +AEA+ + M + G +P++ L+
Sbjct: 204 YEMVAEEIKSARV-KLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLL 262
Query: 315 KCY 317
Y
Sbjct: 263 NYY 265
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 94/198 (47%)
Query: 13 YLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCAR 72
++ +++P ++V Y+ ++ F + + A +LF+EM Q+ + + VT+ ++I
Sbjct: 312 FMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFL 371
Query: 73 LCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTV 132
S A + ++M G PD + T++ + NVD A +++ D +
Sbjct: 372 REGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAI 431
Query: 133 TFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEM 192
++++LI + + +++DMK P+ T+ ++ + R +K A ++++M
Sbjct: 432 SYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQM 491
Query: 193 KRNGISPDYITYSTLLRA 210
G + D TL++A
Sbjct: 492 MDKGFTLDRDVSDTLIKA 509
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 138/307 (44%), Gaps = 1/307 (0%)
Query: 11 LRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINC 70
L L +K G +V N + F A L D+M++ +PD VTF T+++
Sbjct: 120 LAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHG 179
Query: 71 ARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLD 130
+ + AV E+M GC+PD VT VI + D+A L ++ + D
Sbjct: 180 LFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEAD 239
Query: 131 TVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYE 190
V +S +I D LN++ +M G++P++ TY++L+ + + A +
Sbjct: 240 VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 299
Query: 191 EMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVG 250
+M I+P+ +T+++L+ A+ +A ++ EM + I + N L++
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Query: 251 FLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVI 310
LDEA +IF + S PD T+++LI + KV + + +M G N
Sbjct: 360 RLDEAQQIFTLMVSKDCL-PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY 418
Query: 311 TPLVKCY 317
T L+ +
Sbjct: 419 TTLIHGF 425
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 132/292 (45%), Gaps = 1/292 (0%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
+V ++ + K K F+ ++M + + T+ MINC S A+
Sbjct: 65 IVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILG 124
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
KM G P VT +++ + + A L D+ ++ DTVTF+ L+
Sbjct: 125 KMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHN 184
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
+ + + + M V G +P+L TY ++ + + +P LA + +M++ I D + YS
Sbjct: 185 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYS 244
Query: 206 TLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSS 265
T++ + +DAL ++ EM I V + L+S + G +A + D+
Sbjct: 245 TVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER 304
Query: 266 GIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
I P+ TF+SLI ++ K+ EAE + +EMI+ PNI L+ +
Sbjct: 305 KI-NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 138/273 (50%), Gaps = 1/273 (0%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIF 104
A +L +ML+RK+ P+ VTF ++I+ A + F++M +P+ VT ++I
Sbjct: 294 ASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN 353
Query: 105 AYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKP 164
+ + +D A++++ +++ D VT++ LI + + + ++ DM G+
Sbjct: 354 GFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVG 413
Query: 165 NLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIY 224
N TY TL+ ++A A++++++M +G+ P+ +TY+TLL E A+ ++
Sbjct: 414 NTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 473
Query: 225 REMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSC 284
++++++ + N++ G +++ ++F + G+ +PD ++++I+ +
Sbjct: 474 EYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGV-KPDVIAYNTMISGFCK 532
Query: 285 FAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
EA + +M E G P+ L++ +
Sbjct: 533 KGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAH 565
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 125/274 (45%), Gaps = 1/274 (0%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIF 104
A LF EM++ + P V F+ +++ D + + EKM G + T +I
Sbjct: 49 AVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMIN 108
Query: 105 AYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKP 164
R + A + + + VT ++L+ + + + + D M +G +P
Sbjct: 109 CLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 168
Query: 165 NLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIY 224
+ T+ TL+ +++ K A + E M G PD +TY ++ + AL +
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 228
Query: 225 REMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSC 284
+M++ +I V + + ++ +D+A+ +F ++ + GI +PD T+SSLI+
Sbjct: 229 NKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI-RPDVFTYSSLISCLCN 287
Query: 285 FAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
+ + S+A +L++M+E PN+ L+ +
Sbjct: 288 YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA 321
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 108/231 (46%), Gaps = 1/231 (0%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++V YN + F K K +LF +M +R L + VT+ T+I+ S D A F
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF 438
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
++M G P+ +T T++ + ++ A +++ + D T++ + +
Sbjct: 439 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKA 498
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
+ +++ + + GVKP++ YNT++ + A ++ +MK +G PD TY
Sbjct: 499 GKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTY 558
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEA 255
+TL+RA++ + + + +EM+ R L+ M D G LD+
Sbjct: 559 NTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHD-GRLDKG 608
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 119/261 (45%), Gaps = 5/261 (1%)
Query: 18 IKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMS 77
+KP R YNV + F K + A FD ML ++PD VT+ T+I+C
Sbjct: 440 VKPDRQ----FYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRH 495
Query: 78 DRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSAL 137
A E FE M GC P A T +I +Y E D +RL + K++ + VT + L
Sbjct: 496 IVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTL 555
Query: 138 IKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGI 197
+ +YG ++ + ++MK +G+KP+ YN L+ A + A + M +G+
Sbjct: 556 VDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGL 615
Query: 198 SPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVE 257
P + ++L+ A+ +A + + MKEN + V L+ V +
Sbjct: 616 KPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPV 675
Query: 258 IFEDIKSSGIYQPDESTFSSL 278
++E++ SG +PD S L
Sbjct: 676 VYEEMIMSGC-KPDRKARSML 695
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 143/336 (42%), Gaps = 44/336 (13%)
Query: 18 IKP-TRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMI----NCAR 72
IKP TR YN +K + K + AE + EM +R + PD T++ +I N R
Sbjct: 335 IKPRTRA-----YNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGR 389
Query: 73 --------------------------LCSMSDRAVEW------FEKMPGFGCEPDAVTCA 100
L DR EW ++M G +PD
Sbjct: 390 WESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRG-EWQKTFQVLKEMKSIGVKPDRQFYN 448
Query: 101 TVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVL 160
VI + + +D A +DR +E D VT++ LI + + +++ M+
Sbjct: 449 VVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERR 508
Query: 161 GVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDA 220
G P TYN ++ + + K + +MK GI P+ +T++TL+ Y DA
Sbjct: 509 GCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDA 568
Query: 221 LGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLIT 280
+ EMK + + + N L++ A G ++AV F + S G+ +P +SLI
Sbjct: 569 IECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGL-KPSLLALNSLIN 627
Query: 281 VYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKC 316
+ + +EA A+L M E+G KP++ T L+K
Sbjct: 628 AFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKA 663
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 143/303 (47%), Gaps = 6/303 (1%)
Query: 5 ETAPVVLRYLR-DKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVT 63
E+A +VL+ + ++P +++ + F+ +++ ++ EM +KPD
Sbjct: 391 ESARIVLKEMEAGDVQPNS----FVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQF 446
Query: 64 FATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAK 123
+ +I+ + D A+ F++M G EPD VT T+I + + +AE +++ +
Sbjct: 447 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAME 506
Query: 124 TENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPL 183
T++ +I YG E +D + MK G+ PN+ T+ TL+ ++ +
Sbjct: 507 RRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFN 566
Query: 184 LAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLL 243
A EEMK G+ P Y+ L+ AY L E A+ +R M + + ++ N L+
Sbjct: 567 DAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLI 626
Query: 244 SMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGF 303
+ + EA + + +K +G+ +PD T+++L+ K + + EMI SG
Sbjct: 627 NAFGEDRRDAEAFAVLQYMKENGV-KPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGC 685
Query: 304 KPN 306
KP+
Sbjct: 686 KPD 688
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 129/294 (43%), Gaps = 9/294 (3%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRA--VEWFEK 86
YN + + D E A L +M Q + D V ++ +I + D + +++
Sbjct: 200 YNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKE 259
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED 146
+ E D +I +A+ + A +L A+ T T L+ + L D
Sbjct: 260 IERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTAT---LVSIISALAD 316
Query: 147 YDQCLN---VYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYIT 203
+ L ++++++ G+KP YN LL + A+ + EM++ G+SPD T
Sbjct: 317 SGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHT 376
Query: 204 YSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIK 263
YS L+ AY+ E A + +EM+ + + + LL+ D G + ++ +++K
Sbjct: 377 YSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMK 436
Query: 264 SSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
S G+ +PD ++ +I + F + A + M+ G +P+ L+ C+
Sbjct: 437 SIGV-KPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 489
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 136/301 (45%), Gaps = 6/301 (1%)
Query: 45 AEKLFDE-MLQRKLKPDNVTFATMIN-CARLCSMSDRAVEWFEKMPGFGCEPDAVTCATV 102
+EKL++ +L +K +T+ +I CAR + ++A+ KM G + D V + V
Sbjct: 180 SEKLYEAFLLSQKQTLTPLTYNALIGACARNNDI-EKALNLIAKMRQDGYQSDFVNYSLV 238
Query: 103 IFAYARVENVD--MAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVL 160
I + R +D M RLY + + LD + +I + D + L + +
Sbjct: 239 IQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQAT 298
Query: 161 GVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDA 220
G+ T +++ A+ + + L A+ ++EE++++GI P Y+ LL+ Y+ +DA
Sbjct: 299 GLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDA 358
Query: 221 LGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLIT 280
+ EM++ + +LL+ + G + A + +++++ G QP+ FS L+
Sbjct: 359 ESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA-GDVQPNSFVFSRLLA 417
Query: 281 VYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVP 340
+ + + +L EM G KP+ ++ +G R L GI P
Sbjct: 418 GFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEP 477
Query: 341 D 341
D
Sbjct: 478 D 478
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 116/274 (42%), Gaps = 1/274 (0%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIF 104
AE LF+E+ Q +KP + ++ A +M G PD T + +I
Sbjct: 323 AEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLID 382
Query: 105 AYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKP 164
AY + A + + + + ++ FS L+ + ++ + V +MK +GVKP
Sbjct: 383 AYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKP 442
Query: 165 NLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIY 224
+ YN ++ + A ++ M GI PD +T++TL+ + A ++
Sbjct: 443 DRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMF 502
Query: 225 REMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSC 284
M+ N++++ D D+ + +KS GI P+ T ++L+ VY
Sbjct: 503 EAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGIL-PNVVTHTTLVDVYGK 561
Query: 285 FAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
+ ++A L EM G KP+ + L+ Y
Sbjct: 562 SGRFNDAIECLEEMKSVGLKPSSTMYNALINAYA 595
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 2/191 (1%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
YN+ + + + ++ ++L +M + + P+ VT T+++ + A+E E+M
Sbjct: 517 YNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMK 576
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
G +P + +I AYA+ + A + ++ + + ++LI +G
Sbjct: 577 SVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDA 636
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+ V MK GVKP++ TY TL+ A+ R K ++YEEM +G PD S L
Sbjct: 637 EAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLR 696
Query: 209 RA--YIGGYLR 217
A Y+ LR
Sbjct: 697 SALRYMKQTLR 707
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 144/368 (39%), Gaps = 56/368 (15%)
Query: 15 RDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLC 74
RDK++ ++ L N + F K D A +L L T ++I+
Sbjct: 262 RDKLE----LDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADS 317
Query: 75 SMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTF 134
+ A FE++ G +P T +
Sbjct: 318 GRTLEAEALFEELRQSGIKP-----------------------------------RTRAY 342
Query: 135 SALIKMY---GMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEE 191
+AL+K Y G L+D + ++ +M+ GV P+ TY+ L+ A A + A+++ +E
Sbjct: 343 NALLKGYVKTGPLKDAESMVS---EMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKE 399
Query: 192 MKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVD--LCNLLLSMCADV 249
M+ + P+ +S LL + + + +EMK IGV D N+++
Sbjct: 400 MEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKS--IGVKPDRQFYNVVIDTFGKF 457
Query: 250 GFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFV 309
LD A+ F+ + S GI +PD T+++LI + + AE M M G P
Sbjct: 458 NCLDHAMTTFDRMLSEGI-EPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATT 516
Query: 310 ITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPMEELGKLIDCIEK 369
++ YG + GI+P+ L+++ K+ G+ D IE
Sbjct: 517 YNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKS-----GRFNDAIE- 570
Query: 370 ANEELGSV 377
EE+ SV
Sbjct: 571 CLEEMKSV 578
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 72/160 (45%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
+V + + V+ K F A + +EM LKP + + +IN +S++AV F
Sbjct: 549 VVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFR 608
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
M G +P + ++I A+ A + K + D VT++ L+K ++
Sbjct: 609 VMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVD 668
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLA 185
+ + VY++M + G KP+ + L A+ ++ L A
Sbjct: 669 KFQKVPVVYEEMIMSGCKPDRKARSMLRSALRYMKQTLRA 708
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 137/285 (48%), Gaps = 3/285 (1%)
Query: 23 GKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMIN-CARLCSMSDRAV 81
G ++V YN + + A ++ M +R++ PD TF +I+ C + +S+ A
Sbjct: 218 GPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSE-AE 276
Query: 82 EWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMY 141
E++E+M +PD VT + +I+ +D AE ++ ++ D VT+S LI Y
Sbjct: 277 EFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGY 336
Query: 142 GMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDY 201
+ + + ++ +M GV N TY L+ RA K +A+ I+ M G+ P+
Sbjct: 337 CKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNI 396
Query: 202 ITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFED 261
ITY+ LL E AL I +M++N + + N+++ G + +A +I+
Sbjct: 397 ITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCS 456
Query: 262 IKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
+ G+ PD T+++++ EA+A+ +M E G PN
Sbjct: 457 LNCQGL-MPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 122/270 (45%), Gaps = 1/270 (0%)
Query: 48 LFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYA 107
LF M+Q + P F+ +++ D + +E+M G + TC ++ +
Sbjct: 68 LFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC 127
Query: 108 RVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLG 167
R + +A + VTF +L+ + + L ++D M +G KPN+
Sbjct: 128 RCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVV 187
Query: 168 TYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREM 227
YNT++ + ++++ A + M+++GI PD +TY++L+ DA + M
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCM 247
Query: 228 KENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAK 287
+ I V N L+ C G + EA E +E++ + PD T+S LI +++
Sbjct: 248 TKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL-DPDIVTYSLLIYGLCMYSR 306
Query: 288 VSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ EAE M M+ G P++ + L+ Y
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGY 336
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 128/285 (44%), Gaps = 1/285 (0%)
Query: 33 MKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGC 92
+ K K ++ L+++M + + T ++NC CS A+ + KM G
Sbjct: 88 LSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGH 147
Query: 93 EPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLN 152
EP VT +++ + R + V A ++D+ ++ + V ++ +I + D L+
Sbjct: 148 EPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALD 207
Query: 153 VYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYI 212
+ + M+ G+ P++ TYN+L+ + + + A + M + I PD T++ L+ A +
Sbjct: 208 LLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACV 267
Query: 213 GGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDE 272
+A Y EM + + +LL+ LDEA E+F + S G + PD
Sbjct: 268 KEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCF-PDV 326
Query: 273 STFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
T+S LI Y KV + EM + G N T L++ Y
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGY 371
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 128/307 (41%), Gaps = 1/307 (0%)
Query: 9 VVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMI 68
+ L +L IK +V + + F + A +FD+M+ KP+ V + T+I
Sbjct: 134 LALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTII 193
Query: 69 NCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWR 128
+ D A++ +M G PD VT ++I A R+
Sbjct: 194 DGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIY 253
Query: 129 LDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLI 188
D TF+ALI + Y++M + P++ TY+ L+ + + A+ +
Sbjct: 254 PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEM 313
Query: 189 YEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCAD 248
+ M G PD +TYS L+ Y E + ++ EM + + +L+
Sbjct: 314 FGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCR 373
Query: 249 VGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIF 308
G L+ A EIF + G++ P+ T++ L+ K+ +A +L +M ++G +I
Sbjct: 374 AGKLNVAEEIFRRMVFCGVH-PNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIV 432
Query: 309 VITPLVK 315
+++
Sbjct: 433 TYNIIIR 439
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 111/222 (50%), Gaps = 4/222 (1%)
Query: 13 YLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCAR 72
+ + I+ + ++V Y++ + + AE++F M+ + PD VT++ +IN
Sbjct: 278 FYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYC 337
Query: 73 LCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTV 132
+ ++ F +M G + VT +I Y R +++AE ++ R + +
Sbjct: 338 KSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNII 397
Query: 133 TFSALIKMYGMLED--YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYE 190
T++ L ++G+ ++ ++ L + DM+ G+ ++ TYN ++ + +A + A IY
Sbjct: 398 TYNVL--LHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYC 455
Query: 191 EMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRI 232
+ G+ PD TY+T++ LR +A ++R+MKE+ I
Sbjct: 456 SLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGI 497
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 144/287 (50%), Gaps = 5/287 (1%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
YN + F + A++L +M++R++ PD +TF +I+ + A + ++M
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
PD VT ++I+ + + D A+ ++D + D VTF+ +I +Y + D
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVD 449
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+ + + ++ G+ N TYNTL+ A+ +++EM +G+ PD IT + LL
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 509
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIY 268
+ E+AL ++ ++ ++I + N+++ +DEA ++F + G+
Sbjct: 510 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV- 568
Query: 269 QPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
+PD T++ +I+ + + +S+A + ++M ++G +P+ L++
Sbjct: 569 EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 145/300 (48%), Gaps = 7/300 (2%)
Query: 12 RYLRDKIKPTRGKELVLYNVAMKV-FKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINC 70
R LRD I+ +++ +N + K+ K FE AEKL DEML R + PD VT+ +MI
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFE-AEKLCDEMLHRCIFPDTVTYNSMIYG 410
Query: 71 ARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLD 130
+ D A F+ M PD VT T+I Y R + VD +L +
Sbjct: 411 FCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466
Query: 131 TVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYE 190
T T++ LI + +++ + +++ +M GV P+ T N LL K A ++E
Sbjct: 467 TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526
Query: 191 EMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVG 250
++ + I D + Y+ ++ G ++A ++ + + + V N+++S
Sbjct: 527 VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKS 586
Query: 251 FLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVI 310
+ +A +F +K +G ++PD ST+++LI ++ ++ +++EM +GF + F I
Sbjct: 587 AISDANVLFHKMKDNG-HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 645
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 162/412 (39%), Gaps = 53/412 (12%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDR--------- 79
+N+ +K F C + F ++ + +PD VTF T+++ LC + DR
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH--GLC-LEDRISEALALFG 200
Query: 80 ---------AVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLD 130
AV F++M G P +T T+I V A L ++ + +D
Sbjct: 201 YMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID 260
Query: 131 TVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYE 190
VT+ ++ + D LN+ M+ +KP++ Y+ ++ + + A+ ++
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS 320
Query: 191 EMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVG 250
EM GI+P+ TY+ ++ + DA + R+M E I V N L+S G
Sbjct: 321 EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Query: 251 FLDEAVE---------IFEDIKS--SGIY-------------------QPDESTFSSLIT 280
L EA + IF D + S IY PD TF+++I
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIID 440
Query: 281 VYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVP 340
VY +V E +L E+ G N L+ + + G+ P
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Query: 341 DGHCCCCLL-NIMTKTPMEELGKLIDCIEKANEELGSVV-RYLVEGQEEGDQ 390
D C LL +EE +L + I+ + +L +V ++ G +G +
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSK 552
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 130/286 (45%), Gaps = 23/286 (8%)
Query: 30 NVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPG 89
N + VF + + A L+ +M R++ + +F +I C C ++ F K+
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 90 FGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQ 149
G +PD VT T++ + + A L+ + ++T G LE
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALF------GYMVET----------GFLE---- 209
Query: 150 CLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLR 209
+ ++D M +G+ P + T+NTL+ + + L A + +M G+ D +TY T++
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 210 AYIGGYLREDALGIYREMKENRIGVTVDLCNLLLS-MCADVGFLDEAVEIFEDIKSSGIY 268
+ AL + +M+E I V + + ++ +C D G +A +F ++ GI
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKD-GHHSDAQYLFSEMLEKGI- 327
Query: 269 QPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
P+ T++ +I + F + S+A+ +L +MIE P++ L+
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 120/256 (46%), Gaps = 24/256 (9%)
Query: 78 DRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSAL 137
D A+++F+ M AV C VI + R+ D+A LY + + L+ +F+ L
Sbjct: 88 DDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNIL 147
Query: 138 IKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAV--------------YRARKPL 183
IK + L+ + + LG +P++ T+NTLL + Y
Sbjct: 148 IKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGF 207
Query: 184 L-AKLIYEEMKRNGISPDYITYSTLLRAY-IGGYLREDALGIYREMKENRIGVTVDLC-- 239
L A ++++M G++P IT++TL+ + G + E A + + + + G+ +D+
Sbjct: 208 LEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK---GLHIDVVTY 264
Query: 240 -NLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEM 298
++ MC +G A+ + ++ + I +PD +S++I S+A+ + +EM
Sbjct: 265 GTIVNGMCK-MGDTKSALNLLSKMEETHI-KPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 299 IESGFKPNIFVITPLV 314
+E G PN+F ++
Sbjct: 323 LEKGIAPNVFTYNCMI 338
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 147/297 (49%), Gaps = 13/297 (4%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
L YNV +K+ K K+FE A D M + KPD +++T+IN D A+E F+
Sbjct: 149 LQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFD 208
Query: 86 KMPGFGCEPDAVTCATVIF-AYARVENVDMAERLYDRAKTENWRLDTV-TFSALIKMYGM 143
+M G PD VTC ++ + + ++ A L+DR ++ V T + +I
Sbjct: 209 EMSERGVAPD-VTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSK 267
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYIT 203
D CL +++ MK + +L TY++L+ + A A+ ++ E+ S D +T
Sbjct: 268 CGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVT 327
Query: 204 YSTLLRAYIGGYLR----EDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIF 259
Y+T+L GG+ R +++L ++R M E++ V + N+L+ + G +DEA I+
Sbjct: 328 YNTML----GGFCRCGKIKESLELWRIM-EHKNSVNIVSYNILIKGLLENGKIDEATMIW 382
Query: 260 EDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKC 316
+ + G Y D++T+ I V++A ++ E+ SG +++ ++ C
Sbjct: 383 RLMPAKG-YAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDC 438
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 149/294 (50%), Gaps = 5/294 (1%)
Query: 20 PTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDR 79
P V+Y+ ++ + + ++ + + ++ K D ++I SM D+
Sbjct: 37 PGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQ 96
Query: 80 AVEWFEKMPG-FGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALI 138
A++ F++M FGCEP + T++ A+ + E L+ +T + T++ LI
Sbjct: 97 ALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLI 156
Query: 139 KMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGIS 198
KM +++++ D M G KP++ +Y+T++ + +A K A +++EM G++
Sbjct: 157 KMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVA 216
Query: 199 PDYITYSTLLRAYIGGYLREDALGIY-REMKENRIGVTVDLCNLLLSMCADVGFLDEAVE 257
PD Y+ L+ ++ + A+ ++ R ++++ + V N+++S + G +D+ ++
Sbjct: 217 PDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLK 276
Query: 258 IFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVIT 311
I+E +K + + D T+SSLI V +AE++ NE+ E K +I V+T
Sbjct: 277 IWERMKQNE-REKDLYTYSSLIHGLCDAGNVDKAESVFNELDER--KASIDVVT 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 96/202 (47%), Gaps = 4/202 (1%)
Query: 13 YLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCAR 72
+LR+ K +V YN+ + K F A EML+ KPD T++ ++ C
Sbjct: 486 FLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILL-CG- 543
Query: 73 LCS--MSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLD 130
LC D A+E + + G E D + +I V +D A + + N +
Sbjct: 544 LCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTAN 603
Query: 131 TVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYE 190
VT++ L++ + + D ++ ++ M +G++P++ +YNT++ + R A ++
Sbjct: 604 LVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFD 663
Query: 191 EMKRNGISPDYITYSTLLRAYI 212
+ + +GI P T++ L+RA +
Sbjct: 664 DARNHGIFPTVYTWNILVRAVV 685
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 135/300 (45%), Gaps = 16/300 (5%)
Query: 22 RGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAV 81
R K+L Y+ + + + AE +F+E+ +RK D VT+ TM+ C ++
Sbjct: 286 REKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESL 345
Query: 82 EWFEKMPGFGCEPDAVTCATV-IFAYARVEN--VDMAERLYDRAKTENWRLDTVTFSALI 138
E + M ++V + I +EN +D A ++ + + D T+ I
Sbjct: 346 ELWRIME----HKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFI 401
Query: 139 KMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGIS 198
+ ++ L V +++ G ++ Y +++ + + ++ A + +EM ++G+
Sbjct: 402 HGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVE 461
Query: 199 PDYITYSTLLRAYIGGYLREDALG----IYREMKENRIGVTVDLCNLLLSMCADVGFLDE 254
+ S + A IGG +R+ LG REM +N TV N+L+ G E
Sbjct: 462 LN----SHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGE 517
Query: 255 AVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
A +++ +G ++PD T+S L+ K+ A + ++ ++SG + ++ + L+
Sbjct: 518 ASAFVKEMLENG-WKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILI 576
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 97/237 (40%), Gaps = 40/237 (16%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSD--RAVEWFEKMPGFGCEPDAVTCATV 102
A EM + +P V++ +I C LC A + ++M G +PD T + +
Sbjct: 483 ASFFLREMGKNGCRPTVVSYNILI-CG-LCKAGKFGEASAFVKEMLENGWKPDLKTYSIL 540
Query: 103 IFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGV 162
+ R +D+A L+ + D + + LI + D + V +M+
Sbjct: 541 LCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNC 600
Query: 163 KPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALG 222
NL TYNTL+ ++ A +I+ M + G+ PD I+Y+T+++
Sbjct: 601 TANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKG------------ 648
Query: 223 IYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLI 279
L MC V + A+E F+D ++ GI+ P T++ L+
Sbjct: 649 --------------------LCMCRGVSY---AMEFFDDARNHGIF-PTVYTWNILV 681
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 119/296 (40%), Gaps = 8/296 (2%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++V YN + F +C + + +L+ +++ K + V++ +I D A +
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELW-RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIW 382
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
MP G D T I V+ A + ++ LD ++++I
Sbjct: 383 RLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKK 442
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
+ ++ N+ +M GV+ N N L+ + R + A EM +NG P ++Y
Sbjct: 443 KRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSY 502
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCN---LLLSMCADVGFLDEAVEIFED 261
+ L+ +A +EM EN G DL LL +C D +D A+E++
Sbjct: 503 NILICGLCKAGKFGEASAFVKEMLEN--GWKPDLKTYSILLCGLCRDRK-IDLALELWHQ 559
Query: 262 IKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
SG+ + D + LI K+ +A ++ M N+ L++ +
Sbjct: 560 FLQSGL-ETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGF 614
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 106/258 (41%), Gaps = 5/258 (1%)
Query: 60 DNVTFATMINCARLCSMS--DRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAER 117
D +A++I+C LC + A ++M G E ++ C +I R + A
Sbjct: 428 DVYAYASIIDC--LCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASF 485
Query: 118 LYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVY 177
R V+++ LI + + +M G KP+L TY+ LL +
Sbjct: 486 FLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLC 545
Query: 178 RARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVD 237
R RK LA ++ + ++G+ D + ++ L+ +DA+ + M+ +
Sbjct: 546 RDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLV 605
Query: 238 LCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNE 297
N L+ VG + A I+ + G+ QPD ++++++ VS A ++
Sbjct: 606 TYNTLMEGFFKVGDSNRATVIWGYMYKMGL-QPDIISYNTIMKGLCMCRGVSYAMEFFDD 664
Query: 298 MIESGFKPNIFVITPLVK 315
G P ++ LV+
Sbjct: 665 ARNHGIFPTVYTWNILVR 682
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 123/261 (47%), Gaps = 41/261 (15%)
Query: 45 AEKLFDEMLQR-KLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVI 103
A LFDEM + + PD+ TF T+IN SM D A F+ M + C PD VT T+I
Sbjct: 192 AHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTII 251
Query: 104 FAYARVENVDMAERLYD--RAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLG 161
R V +A + K + + V+++ L++ Y M ++ D+ + V+ DM G
Sbjct: 252 DGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRG 311
Query: 162 VKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDAL 221
+KPN TYNTL+ + A + Y+E+K D + IGG DA
Sbjct: 312 LKPNAVTYNTLIKGLSEAHR-------YDEIK------DIL---------IGG---NDAF 346
Query: 222 GIYREMKENRIGVTVDLC--NLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLI 279
+ D C N+L+ D G LD A+++F+++ + ++ PD +++S LI
Sbjct: 347 TTF----------APDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLH-PDSASYSVLI 395
Query: 280 TVYSCFAKVSEAEAMLNEMIE 300
+ AE + NE+ E
Sbjct: 396 RTLCMRNEFDRAETLFNELFE 416
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 124/259 (47%), Gaps = 5/259 (1%)
Query: 62 VTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLY-- 119
++ T++ RL + + +F+ + G + ++ R N+++A
Sbjct: 66 ISRTTVLQTLRLIKVPADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFS 125
Query: 120 -DRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYR 178
+R +L F++LI+ YG + + + ++ MK +G+ P++ T+N+LL + +
Sbjct: 126 IERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLK 185
Query: 179 ARKPLLAKLIYEEMKRN-GISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVD 237
+ +A +++EM+R G++PD T++TL+ + + ++A I+++M+ V
Sbjct: 186 RGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVV 245
Query: 238 LCNLLLSMCADVGFLDEAVEIFED-IKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLN 296
N ++ G + A + +K + P+ ++++L+ Y ++ EA + +
Sbjct: 246 TYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFH 305
Query: 297 EMIESGFKPNIFVITPLVK 315
+M+ G KPN L+K
Sbjct: 306 DMLSRGLKPNAVTYNTLIK 324
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 133/305 (43%), Gaps = 23/305 (7%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMIN----CARLCSMSDRAV 81
+V Y ++ + ++ + A +F +ML R LKP+ VT+ T+I R + D +
Sbjct: 281 VVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILI 340
Query: 82 EWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMY 141
+ F PDA T +I A+ ++D A +++ D+ ++S LI+
Sbjct: 341 GGNDAFTTFA--PDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTL 398
Query: 142 GMLEDYDQCLNVYDDM----KVLG---VKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKR 194
M ++D+ +++++ +LG KP YN + + K A+ ++ ++ +
Sbjct: 399 CMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMK 458
Query: 195 NGISPDYITYSTLLRAYIGGYLREDALGIYRE----MKENRIGVTVDLCNLLLSMCADVG 250
G+ D +Y TL I G+ RE E M ++ LL+ +G
Sbjct: 459 RGVQ-DPPSYKTL----ITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIG 513
Query: 251 FLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVI 310
A + + + S Y P +TF S++ + +E+ ++ M+E + NI +
Sbjct: 514 EALLAHDTLQRMLRSS-YLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLS 572
Query: 311 TPLVK 315
T +V+
Sbjct: 573 TQVVR 577
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 139/315 (44%), Gaps = 24/315 (7%)
Query: 14 LRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINC--- 70
LRD + P ++V N M + K E +F EM + P V++ T+I
Sbjct: 330 LRDGLTP----DVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFE 385
Query: 71 --ARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWR 128
A + +S WF+KM P T + +I Y + V+ A L + + +
Sbjct: 386 SKAHVSEVSS----WFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFP 441
Query: 129 LDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKL- 187
+ +LI G + Y+ ++ ++K N G ++ + AV KL
Sbjct: 442 PCPAAYCSLINALGKAKRYEAANELFKELK-----ENFGNVSSRVYAVMIKHFGKCGKLS 496
Query: 188 ----IYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLL 243
++ EMK G PD Y+ L+ + + +A + R+M+EN ++ N++L
Sbjct: 497 EAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIIL 556
Query: 244 SMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGF 303
+ A G A+E+FE IK SGI +PD T+++L+ ++ EA M+ EM + GF
Sbjct: 557 NGFARTGVPRRAIEMFETIKHSGI-KPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGF 615
Query: 304 KPNIFVITPLVKCYG 318
+ + + ++ G
Sbjct: 616 EYDAITYSSILDAVG 630
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 160/377 (42%), Gaps = 38/377 (10%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+ + Y+ + ++K + A +LFDEM ++P + T++ ++A++ F
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLF 291
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
E+M GC P T +I + VD A Y + D V + L+ + G +
Sbjct: 292 EEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKV 351
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLL-AKLIYEEMKRNGISPDYIT 203
++ NV+ +M + P + +YNT++ A++ ++ + +++MK + +SP T
Sbjct: 352 GRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFT 411
Query: 204 YSTLLRAY----------------------------------IGGYLR-EDALGIYREMK 228
YS L+ Y +G R E A +++E+K
Sbjct: 412 YSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELK 471
Query: 229 ENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKV 288
EN V+ + +++ G L EAV++F ++K+ G PD +++L++ +
Sbjct: 472 ENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQG-SGPDVYAYNALMSGMVKAGMI 530
Query: 289 SEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCL 348
+EA ++L +M E+G + +I ++ + GI PDG L
Sbjct: 531 NEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTL 590
Query: 349 LNIMTKTPM-EELGKLI 364
L M EE +++
Sbjct: 591 LGCFAHAGMFEEAARMM 607
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 137/306 (44%), Gaps = 9/306 (2%)
Query: 76 MSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTE-NWRLDTVTF 134
M +A+ F + G C+P + T +VI + + +Y E + DT+T+
Sbjct: 177 MVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITY 236
Query: 135 SALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKR 194
SALI Y L D + ++D+MK ++P Y TLL ++ K A ++EEMKR
Sbjct: 237 SALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKR 296
Query: 195 NGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDE 254
G SP TY+ L++ ++A G Y++M + + V N L+++ VG ++E
Sbjct: 297 AGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEE 356
Query: 255 AVEIFEDIKSSGIYQ--PDESTFSSLI-TVYSCFAKVSEAEAMLNEMIESGFKPNIFVIT 311
+F ++ G+++ P +++++I ++ A VSE + ++M P+ F +
Sbjct: 357 LTNVFSEM---GMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYS 413
Query: 312 PLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPMEELGKLIDCIEKAN 371
L+ Y + G P C L+N + K E + ++
Sbjct: 414 ILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAAN--ELFKELK 471
Query: 372 EELGSV 377
E G+V
Sbjct: 472 ENFGNV 477
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 131/289 (45%), Gaps = 13/289 (4%)
Query: 33 MKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGC 92
+K+FK D E A ++ KLK D+ +++ ++ + +W K F
Sbjct: 71 VKIFKWGPDAEKALEVL------KLKVDHRLVRSILEIDVEINVKIQFFKWAGKRRNF-- 122
Query: 93 EPDAVTCATVI--FAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQC 150
+ D T T+I AR+ +M + + + + S L+K G + +
Sbjct: 123 QHDCSTYMTLIRCLEEARLYG-EMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKA 181
Query: 151 LNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNG-ISPDYITYSTLLR 209
L+V+ K KP TYN+++ + + + +Y EM G PD ITYS L+
Sbjct: 182 LSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALIS 241
Query: 210 AYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQ 269
+Y + A+ ++ EMK+N + T + LL + VG +++A+++FE++K +G
Sbjct: 242 SYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGC-S 300
Query: 270 PDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
P T++ LI +V EA +M+ G P++ + L+ G
Sbjct: 301 PTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILG 349
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 137/299 (45%), Gaps = 5/299 (1%)
Query: 9 VVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMI 68
V+ + L D +PT ++ Y + ++ + A KL DEML R LKPD T+ T+I
Sbjct: 215 VLNQLLSDNCQPT----VITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Query: 69 NCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWR 128
M DRA E + GCEPD ++ ++ A + E+L + +E
Sbjct: 271 RGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD 330
Query: 129 LDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLI 188
+ VT+S LI ++ +N+ MK G+ P+ +Y+ L+ A R + +A
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 189 YEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCAD 248
E M +G PD + Y+T+L + AL I+ ++ E N + S
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 249 VGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNI 307
G A+ + ++ S+GI PDE T++S+I+ V EA +L +M F P++
Sbjct: 451 SGDKIRALHMILEMMSNGI-DPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSV 508
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 130/275 (47%), Gaps = 1/275 (0%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+++ YN+ ++ +E EKL +M K P+ VT++ +I + A+
Sbjct: 297 DVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLL 356
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
+ M G PDA + +I A+ R +D+A + ++ D V ++ ++
Sbjct: 357 KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKN 416
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
DQ L ++ + +G PN +YNT+ A++ + + A + EM NGI PD ITY
Sbjct: 417 GKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITY 476
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
++++ + ++A + +M+ +V N++L +++A+ + E +
Sbjct: 477 NSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVG 536
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMI 299
+G +P+E+T++ LI +EA + N+++
Sbjct: 537 NGC-RPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 141/299 (47%), Gaps = 6/299 (2%)
Query: 11 LRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINC 70
L L ++ +++L +K F ++ A ++ E+L++ +PD + +IN
Sbjct: 109 LHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYNALIN- 166
Query: 71 ARLCSMS--DRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWR 128
C M+ D A ++M PD VT +I + +D+A ++ ++ ++N +
Sbjct: 167 -GFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQ 225
Query: 129 LDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLI 188
+T++ LI+ + D+ L + D+M G+KP++ TYNT++ + + A +
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285
Query: 189 YEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCAD 248
++ G PD I+Y+ LLRA + E+ + +M + V ++L++
Sbjct: 286 VRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345
Query: 249 VGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNI 307
G ++EA+ + + +K G+ PD ++ LI + ++ A L MI G P+I
Sbjct: 346 DGKIEEAMNLLKLMKEKGL-TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 127/288 (44%), Gaps = 5/288 (1%)
Query: 33 MKVFKK-CKDFEGAE--KLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPG 89
+K+F + C+ E L + M+++ PD + +I +AV E +
Sbjct: 93 LKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEK 152
Query: 90 FGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQ 149
FG +PD +I + ++ +D A R+ DR +++++ DTVT++ +I D
Sbjct: 153 FG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDL 211
Query: 150 CLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLR 209
L V + + +P + TY L+ A A + +EM G+ PD TY+T++R
Sbjct: 212 ALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIR 271
Query: 210 AYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQ 269
+ + A + R ++ V N+LL + G +E ++ + S
Sbjct: 272 GMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC-D 330
Query: 270 PDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
P+ T+S LIT K+ EA +L M E G P+ + PL+ +
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 378
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 152/301 (50%), Gaps = 13/301 (4%)
Query: 5 ETAP-VVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVT 63
ETA VV R D+IKP +V N + + A F +M + +K + VT
Sbjct: 423 ETAKEVVSRMKEDEIKPN----VVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVT 478
Query: 64 FATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAK 123
+ T+I+ S ++A+ W+EKM GC PDA +I +V A R+ ++ K
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 124 TENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPL 183
+ LD + ++ LI ++ + ++ + DM+ G KP+ TYNTL+ + +
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 184 LAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMK-ENRIGVTVDLCNLL 242
+ + E+M+ +G+ P TY ++ AY ++AL ++++M +++ + N+L
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 243 LSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAML---NEMI 299
++ + +G +A+ + E++K + +P+ T+++L + C + ++ E +L +EM+
Sbjct: 659 INAFSKLGNFGQALSLKEEMKMKMV-RPNVETYNAL---FKCLNEKTQGETLLKLMDEMV 714
Query: 300 E 300
E
Sbjct: 715 E 715
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 133/333 (39%), Gaps = 47/333 (14%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
+N + + D L +M + K++PD VT +IN D A+E FE+M
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 89 G---------------FG---------------------------CEPDAVTCATVIFAY 106
G F C P+AVT +I Y
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 107 ARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNL 166
R ++ A+ + R K + + + VT + ++ + + + DM+ GVK N+
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 167 GTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYRE 226
TY TL+ A A YE+M G SPD Y L+ DA+ + +
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 227 MKENRIGVTVDLC--NLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSC 284
+KE G ++DL N+L+ + D ++ E+ D++ G +PD T+++LI+ +
Sbjct: 537 LKEG--GFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEG-KKPDSITYNTLISFFGK 593
Query: 285 FAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
E M+ +M E G P + ++ Y
Sbjct: 594 HKDFESVERMMEQMREDGLDPTVTTYGAVIDAY 626
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 132/326 (40%), Gaps = 36/326 (11%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEM-LQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
+ +N + K + AE+L M L+ + P+ VT+ +I+ + A E
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
+M +P+ VT T++ R ++MA + + E + + VT+ LI +
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGIS------- 198
+ ++ + Y+ M G P+ Y L+ + + R+ A + E++K G S
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 199 ----------------------------PDYITYSTLLRAYIGGYLREDALGIYREMKEN 230
PD ITY+TL+ + E + +M+E+
Sbjct: 551 MLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 231 RIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSE 290
+ TV ++ VG LDEA+++F+D+ P+ ++ LI +S +
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQ 670
Query: 291 AEAMLNEMIESGFKPNIFVITPLVKC 316
A ++ EM +PN+ L KC
Sbjct: 671 ALSLKEEMKMKMVRPNVETYNALFKC 696
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 1/158 (0%)
Query: 77 SDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSA 136
+++ E M G +PD++T T+I + + ++ + ER+ ++ + + T+ A
Sbjct: 562 AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 137 LIKMYGMLEDYDQCLNVYDDMKVLG-VKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRN 195
+I Y + + D+ L ++ DM + V PN YN L+ A + A + EEMK
Sbjct: 622 VIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMK 681
Query: 196 GISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIG 233
+ P+ TY+ L + E L + EM E+ +
Sbjct: 682 MVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEHLVN 719
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 71/172 (41%), Gaps = 36/172 (20%)
Query: 3 NSETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNV 62
+ A V L D K + + + YN + F K KDFE E++ ++M + L P
Sbjct: 558 DKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVT 617
Query: 63 TFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLY-DR 121
T+ +I+ AY V +D A +L+ D
Sbjct: 618 TYGAVID-----------------------------------AYCSVGELDEALKLFKDM 642
Query: 122 AKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLL 173
+TV ++ LI + L ++ Q L++ ++MK+ V+PN+ TYN L
Sbjct: 643 GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALF 694
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/334 (19%), Positives = 131/334 (39%), Gaps = 42/334 (12%)
Query: 30 NVAMKVFKKCKDFEGAEKLFDEMLQRK--LKPDNVTFATMINCA---RLCSMSDRAVEWF 84
NV + V + + A K+ DEMLQ++ P+ +T +++ RL + ++ +
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLT-EEKIIALI 247
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
+ G P++V I + + + A + L+ F+AL+ G
Sbjct: 248 SRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRN 307
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
D + ++ M + ++P++ T L+ + ++R+ A ++E+M+
Sbjct: 308 MDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGK--------- 358
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
R G ++ D++ N L+ VG L EA E+ +K
Sbjct: 359 ----RTDDGNVIKADSIHF----------------NTLIDGLCKVGRLKEAEELLVRMKL 398
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV----KCYGXX 320
P+ T++ LI Y K+ A+ +++ M E KPN+ + +V + +G
Sbjct: 399 EERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLN 458
Query: 321 XXXXXXXXXXXRGLDWGIVPDG---HCCCCLLNI 351
G+ +V H CC + N+
Sbjct: 459 MAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 147/334 (44%), Gaps = 2/334 (0%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEK 86
++ N + K E A KLFDE L+ + D TF +I +++A+E
Sbjct: 172 MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGV 231
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTEN-WRLDTVTFSALIKMYGMLE 145
M GFGCEPD VT T+I + + ++ A ++ K+ + D VT++++I Y
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
+ ++ DDM LG+ P T+N L+ +A + L A+ I +M G PD +T++
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFT 351
Query: 206 TLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSS 265
+L+ Y ++ EM + ++L++ + L +A E+ + S
Sbjct: 352 SLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
Query: 266 GIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXX 325
I P ++ +I + KV+EA ++ EM + KP+ T L+ +
Sbjct: 412 DII-PQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFE 470
Query: 326 XXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPMEE 359
+ + G PD LL+ + K M +
Sbjct: 471 AVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAK 504
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 130/291 (44%), Gaps = 17/291 (5%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKL-KPDNVTFATMINCARLCSMSDRAVEW 83
++V YN ++ F K + A ++F ++ + PD VT+ +MI+ A
Sbjct: 240 DIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299
Query: 84 FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGM 143
+ M G P VT ++ YA+ + AE + + + D VTF++LI Y
Sbjct: 300 LDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCR 359
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYIT 203
+ Q ++++M G+ PN TY+ L+ A+ + L A+ + ++ I P
Sbjct: 360 VGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFM 419
Query: 204 YSTLLRAYIGGYLREDALGIYREM-----KENRIGVTVDLCNLLLSMCADVGFLDEAVEI 258
Y+ ++ + +A I EM K ++I T+ L++ C G + EAV I
Sbjct: 420 YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTI----LIIGHCMK-GRMFEAVSI 474
Query: 259 FEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEA--MLNEMIESGFKPNI 307
F + + G PD+ T SSL+ SC K A+ LN++ G N+
Sbjct: 475 FHKMVAIGC-SPDKITVSSLL---SCLLKAGMAKEAYHLNQIARKGQSNNV 521
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 123/293 (41%), Gaps = 45/293 (15%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEK-- 86
YN+ + K + A ++F+ M + P+N +++ S +++ F
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVS-----SFAEKGKLHFATAL 160
Query: 87 -MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
+ F E + +++ +++ V+ A +L+D DT TF+ LI+ +
Sbjct: 161 LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG 220
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGI-SPDYITY 204
++ L + M G +P++ TYNTL+ ++ + A +++++K + SPD +TY
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
++++ Y G + EA + +D+
Sbjct: 281 TSMISGY-----------------------------------CKAGKMREASSLLDDMLR 305
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
GIY P TF+ L+ Y+ ++ AE + +MI G P++ T L+ Y
Sbjct: 306 LGIY-PTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGY 357
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 147/334 (44%), Gaps = 2/334 (0%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEK 86
++ N + K E A KLFDE L+ + D TF +I +++A+E
Sbjct: 172 MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGV 231
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTEN-WRLDTVTFSALIKMYGMLE 145
M GFGCEPD VT T+I + + ++ A ++ K+ + D VT++++I Y
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
+ ++ DDM LG+ P T+N L+ +A + L A+ I +M G PD +T++
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFT 351
Query: 206 TLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSS 265
+L+ Y ++ EM + ++L++ + L +A E+ + S
Sbjct: 352 SLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
Query: 266 GIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXX 325
I P ++ +I + KV+EA ++ EM + KP+ T L+ +
Sbjct: 412 DII-PQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFE 470
Query: 326 XXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPMEE 359
+ + G PD LL+ + K M +
Sbjct: 471 AVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAK 504
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 130/291 (44%), Gaps = 17/291 (5%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKL-KPDNVTFATMINCARLCSMSDRAVEW 83
++V YN ++ F K + A ++F ++ + PD VT+ +MI+ A
Sbjct: 240 DIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299
Query: 84 FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGM 143
+ M G P VT ++ YA+ + AE + + + D VTF++LI Y
Sbjct: 300 LDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCR 359
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYIT 203
+ Q ++++M G+ PN TY+ L+ A+ + L A+ + ++ I P
Sbjct: 360 VGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFM 419
Query: 204 YSTLLRAYIGGYLREDALGIYREM-----KENRIGVTVDLCNLLLSMCADVGFLDEAVEI 258
Y+ ++ + +A I EM K ++I T+ L++ C G + EAV I
Sbjct: 420 YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTI----LIIGHCMK-GRMFEAVSI 474
Query: 259 FEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEA--MLNEMIESGFKPNI 307
F + + G PD+ T SSL+ SC K A+ LN++ G N+
Sbjct: 475 FHKMVAIGC-SPDKITVSSLL---SCLLKAGMAKEAYHLNQIARKGQSNNV 521
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 123/293 (41%), Gaps = 45/293 (15%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEK-- 86
YN+ + K + A ++F+ M + P+N +++ S +++ F
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVS-----SFAEKGKLHFATAL 160
Query: 87 -MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
+ F E + +++ +++ V+ A +L+D DT TF+ LI+ +
Sbjct: 161 LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG 220
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGI-SPDYITY 204
++ L + M G +P++ TYNTL+ ++ + A +++++K + SPD +TY
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
++++ Y G + EA + +D+
Sbjct: 281 TSMISGY-----------------------------------CKAGKMREASSLLDDMLR 305
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
GIY P TF+ L+ Y+ ++ AE + +MI G P++ T L+ Y
Sbjct: 306 LGIY-PTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGY 357
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 145/300 (48%), Gaps = 7/300 (2%)
Query: 12 RYLRDKIKPTRGKELVLYNVAMKV-FKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINC 70
R LRD I+ +++ +N + K+ K FE AEKL DEML R + PD VT+ +MI
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFE-AEKLCDEMLHRCIFPDTVTYNSMIYG 410
Query: 71 ARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLD 130
+ D A F+ M PD VT T+I Y R + VD +L +
Sbjct: 411 FCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466
Query: 131 TVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYE 190
T T++ LI + +++ + +++ +M GV P+ T N LL K A ++E
Sbjct: 467 TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526
Query: 191 EMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVG 250
++ + I D + Y+ ++ G ++A ++ + + + V N+++S
Sbjct: 527 VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKS 586
Query: 251 FLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVI 310
+ +A +F +K +G ++PD ST+++LI ++ ++ +++EM +GF + F I
Sbjct: 587 AISDANVLFHKMKDNG-HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 645
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 153/334 (45%), Gaps = 44/334 (13%)
Query: 17 KIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMIN--CA--- 71
IKP ++V+Y+ + K A+ LF EML++ + P+ T+ MI+ C+
Sbjct: 291 HIKP----DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR 346
Query: 72 ------------------------RLCSMSDRAVEWFE------KMPGFGCEPDAVTCAT 101
L S S + + FE +M PD VT +
Sbjct: 347 WSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNS 406
Query: 102 VIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLG 161
+I+ + + D A+ ++D + D VTF+ +I +Y + D+ + + ++ G
Sbjct: 407 MIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462
Query: 162 VKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDAL 221
+ N TYNTL+ A+ +++EM +G+ PD IT + LL + E+AL
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522
Query: 222 GIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITV 281
++ ++ ++I + N+++ +DEA ++F + G+ +PD T++ +I+
Sbjct: 523 ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV-EPDVQTYNVMISG 581
Query: 282 YSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
+ + +S+A + ++M ++G +P+ L++
Sbjct: 582 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 149/352 (42%), Gaps = 9/352 (2%)
Query: 42 FEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCAT 101
F A LFD+M++ L P +TF T+IN L A KM G G D VT T
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 102 VIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLG 161
++ ++ + A L + + + + D V +SA+I + ++ +M G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 162 VKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDAL 221
+ PN+ TYN ++ + A+ + +M I+PD +T++ L+ A + +A
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 222 GIYREMKENRIGV-TVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLIT 280
+ EM I TV +++ C F D+A +F+ + S PD TF+++I
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF-DDAKHMFDLMAS-----PDVVTFNTIID 440
Query: 281 VYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVP 340
VY +V E +L E+ G N L+ + + G+ P
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Query: 341 DGHCCCCLL-NIMTKTPMEELGKLIDCIEKANEELGSVV-RYLVEGQEEGDQ 390
D C LL +EE +L + I+ + +L +V ++ G +G +
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSK 552
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 127/285 (44%), Gaps = 21/285 (7%)
Query: 30 NVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPG 89
N + VF + + A L+ +M R++ + +F +I C C ++ F K+
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 90 FGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQ 149
G +PD VT T++ + + A L+ + ++T G LE
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALF------GYMVET----------GFLE---- 209
Query: 150 CLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLR 209
+ ++D M +G+ P + T+NTL+ + + L A + +M G+ D +TY T++
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 210 AYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQ 269
+ AL + +M+E I V + + ++ G +A +F ++ GI
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI-A 328
Query: 270 PDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
P+ T++ +I + F + S+A+ +L +MIE P++ L+
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 120/256 (46%), Gaps = 24/256 (9%)
Query: 78 DRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSAL 137
D A+++F+ M AV C VI + R+ D+A LY + + L+ +F+ L
Sbjct: 88 DDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNIL 147
Query: 138 IKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAV--------------YRARKPL 183
IK + L+ + + LG +P++ T+NTLL + Y
Sbjct: 148 IKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGF 207
Query: 184 L-AKLIYEEMKRNGISPDYITYSTLLRAY-IGGYLREDALGIYREMKENRIGVTVDLC-- 239
L A ++++M G++P IT++TL+ + G + E A + + + + G+ +D+
Sbjct: 208 LEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK---GLHIDVVTY 264
Query: 240 -NLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEM 298
++ MC +G A+ + ++ + I +PD +S++I S+A+ + +EM
Sbjct: 265 GTIVNGMCK-MGDTKSALNLLSKMEETHI-KPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 299 IESGFKPNIFVITPLV 314
+E G PN+F ++
Sbjct: 323 LEKGIAPNVFTYNCMI 338
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 138/270 (51%), Gaps = 15/270 (5%)
Query: 43 EGAEKLFDEM----LQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP-GFGCEPDAV 97
E A KLFDEM +R +K N + +N +L D A++ F+++P G PD V
Sbjct: 139 EHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKL----DEAMKTFKELPEKLGITPDLV 194
Query: 98 TCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDM 157
T T+I A R ++D +++ + + D ++F+ L++ + E + + ++D M
Sbjct: 195 TYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLM 254
Query: 158 KVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLR 217
K + PN+ +YN+ + + R +K A + + MK GISPD TY+ L+ AY
Sbjct: 255 KSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNL 314
Query: 218 EDALGIYREMKENRIGV-TVDLCNLLLSMCADVGFLDEAVEIFED-IKSSGIYQPDESTF 275
E+ + Y EMKE + TV C L+ +C G LD AVE+ E+ IK + +P+ +
Sbjct: 315 EEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKK-GDLDRAVEVSEEAIKHKLLSRPN--MY 371
Query: 276 SSLITVYSCFAKVSEAEAML-NEMIESGFK 304
++ K+ EA ++ N ++S F+
Sbjct: 372 KPVVERLMGAGKIDEATQLVKNGKLQSYFR 401
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 115/244 (47%), Gaps = 5/244 (2%)
Query: 64 FATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAK 123
F + A+ S D +++ +K E D V +++ Y+ + + A +L+D
Sbjct: 93 FIRRLREAKKFSTIDEVLQYQKKFDDIKSE-DFVIRIMLLYGYSGM--AEHAHKLFDEMP 149
Query: 124 TENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDM-KVLGVKPNLGTYNTLLPAVYRARKP 182
N +F+AL+ Y + D+ + + ++ + LG+ P+L TYNT++ A+ R
Sbjct: 150 ELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSM 209
Query: 183 LLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLL 242
I+EE+++NG PD I+++TLL + L + I+ MK + + N
Sbjct: 210 DDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSR 269
Query: 243 LSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESG 302
+ +A+ + + +K+ GI PD T+++LIT Y + E NEM E G
Sbjct: 270 VRGLTRNKKFTDALNLIDVMKTEGI-SPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKG 328
Query: 303 FKPN 306
P+
Sbjct: 329 LTPD 332
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 108/250 (43%), Gaps = 39/250 (15%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+LV YN +K + + +F+E+ + +PD ++F T++
Sbjct: 192 DLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLE--------------- 236
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
+ R E +R++D K++N + ++++ ++
Sbjct: 237 --------------------EFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRN 276
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKL-IYEEMKRNGISPDYIT 203
+ + LN+ D MK G+ P++ TYN L+ A YR L + Y EMK G++PD +T
Sbjct: 277 KKFTDALNLIDVMKTEGISPDVHTYNALITA-YRVDNNLEEVMKCYNEMKEKGLTPDTVT 335
Query: 204 YSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFED-- 261
Y L+ + A+ + E ++++ ++ ++ G +DEA ++ ++
Sbjct: 336 YCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVKNGK 395
Query: 262 IKSSGIYQPD 271
++S Y PD
Sbjct: 396 LQSYFRYLPD 405
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 143/328 (43%), Gaps = 38/328 (11%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
+V++ + F K ++ A LF M++ + P+ + +I+ AV
Sbjct: 304 VVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLS 363
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
+M PD T +I + V A RL+ + K E + T+++LI Y
Sbjct: 364 EMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEY 423
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
+ +Q L++ +M GV+PN+ T++TL+ R A +Y EM GI PD +TY+
Sbjct: 424 NMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYT 483
Query: 206 TLLRAYIGGYLREDALGIYREM--------------------KENRIGVTVDLCN----- 240
L+ A+ ++AL +Y +M KE R+ V +D
Sbjct: 484 ALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQ 543
Query: 241 -----------LLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVS 289
L+ +C + G++ A F D++S GI PD ++ S++ + +++
Sbjct: 544 RSCWNHVGFTCLIEGLCQN-GYILRASRFFSDMRSCGI-TPDICSYVSMLKGHLQEKRIT 601
Query: 290 EAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ + +MI++G PN+ V L + Y
Sbjct: 602 DTMMLQCDMIKTGILPNLLVNQLLARFY 629
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 130/293 (44%), Gaps = 1/293 (0%)
Query: 49 FDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYAR 108
+ M+ R L PD + + C + + + ++M G +P+ I R
Sbjct: 187 YQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCR 246
Query: 109 VENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGT 168
++ AE++++ K + T+SA+I Y + Q +Y ++ V + PN+
Sbjct: 247 DNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVV 306
Query: 169 YNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMK 228
+ TL+ +AR+ + A+ ++ M + G+ P+ Y+ L+ + +A+G+ EM+
Sbjct: 307 FGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEME 366
Query: 229 ENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKV 288
+ V +L++ + EA +F+ +K+ I+ P +T++SLI Y +
Sbjct: 367 SLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIF-PSSATYNSLIHGYCKEYNM 425
Query: 289 SEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPD 341
+A + +EM SG +PNI + L+ Y GIVPD
Sbjct: 426 EQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPD 478
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 153/335 (45%), Gaps = 16/335 (4%)
Query: 54 QRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVD 113
R + D VT+ T+I+ ++D A ++ +M G PD V+ T+I + +V N
Sbjct: 154 NRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFV 213
Query: 114 MAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLL 173
A+ L D N T+ S+ ++ + E Y DM + G P++ T+++++
Sbjct: 214 RAKALVDEISELNLITHTILLSSYYNLHAIEE-------AYRDMVMSGFDPDVVTFSSII 266
Query: 174 PAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIG 233
+ + K L L+ EM+ + P+++TY+TL+ + + AL +Y +M I
Sbjct: 267 NRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIP 326
Query: 234 VTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEA 293
V + + +L+ G L EA + F+ + P+ T+++L+ +S AE
Sbjct: 327 VDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDN-QVPNVVTYTALVDGLCKAGDLSSAEF 385
Query: 294 MLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMT 353
++ +M+E PN+ + ++ Y + D +VP+G +++ +
Sbjct: 386 IITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLF 445
Query: 354 KTPMEELG-------KLIDCIEKANEELGSVVRYL 381
K EE+ +LI +E+ N L ++V +L
Sbjct: 446 KAGKEEMAIELSKEMRLIG-VEENNYILDALVNHL 479
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 140/330 (42%), Gaps = 2/330 (0%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++V YNV + K GA+ + M ++ ++PD TF M+N R S+ ++ +
Sbjct: 538 DVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLW 596
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
+KM G +P ++C V+ ++ A + ++ + T+ +
Sbjct: 597 DKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKH 656
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
+ D ++ + G+K + YNTL+ + + A ++ +M+ G PD +T+
Sbjct: 657 KRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTF 716
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
++L+ Y G AL Y M E I V N ++ +D G + E + ++KS
Sbjct: 717 NSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKS 776
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXX 324
G+ +PD+ T+++LI+ + + + + EMI G P L+ +
Sbjct: 777 RGM-RPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKML 835
Query: 325 XXXXXXXRGLDWGIVPDGHCCCCLLNIMTK 354
G+ P+ C +++ + K
Sbjct: 836 QARELLKEMGKRGVSPNTSTYCTMISGLCK 865
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 124/285 (43%), Gaps = 8/285 (2%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
+V Y + K D AE + +ML++ + P+ VT+++MIN M + AV
Sbjct: 364 VVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLR 423
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
KM P+ T TVI + +MA L + + AL+ +
Sbjct: 424 KMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIG 483
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
+ + DM GV + Y +L+ ++ A EEM+ G+ D ++Y+
Sbjct: 484 RIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYN 543
Query: 206 TLLRAYIGGYLREDALG---IYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDI 262
L I G L+ +G Y+ M+E I + N++++ G + +++++ +
Sbjct: 544 VL----ISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKM 599
Query: 263 KSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNI 307
KS GI +P + + ++ + K+ EA +LN+M+ PN+
Sbjct: 600 KSCGI-KPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNL 643
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/337 (18%), Positives = 137/337 (40%), Gaps = 35/337 (10%)
Query: 12 RYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDE-------------------- 51
++L + +K + V YN + F K +F A+ L DE
Sbjct: 182 QFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLH 241
Query: 52 --------MLQRKLKPDNVTFATMINCARLCSMSDRAVE---WFEKMPGFGCEPDAVTCA 100
M+ PD VTF+++IN RLC + +E +M P+ VT
Sbjct: 242 AIEEAYRDMVMSGFDPDVVTFSSIIN--RLCK-GGKVLEGGLLLREMEEMSVYPNHVTYT 298
Query: 101 TVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVL 160
T++ + + A LY + +D V ++ L+ D + + +
Sbjct: 299 TLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLED 358
Query: 161 GVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDA 220
PN+ TY L+ + +A A+ I +M + P+ +TYS+++ Y+ + E+A
Sbjct: 359 NQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEA 418
Query: 221 LGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLIT 280
+ + R+M++ + ++ G + A+E+ ++++ G+ + + +L+
Sbjct: 419 VSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGV-EENNYILDALVN 477
Query: 281 VYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
++ E + ++ +M+ G + T L+ +
Sbjct: 478 HLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVF 514
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 128/284 (45%), Gaps = 7/284 (2%)
Query: 33 MKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGC 92
+K + K+ +G L +M+ + + D + + ++I+ + A+ W E+M G
Sbjct: 479 LKRIGRIKEVKG---LVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGM 535
Query: 93 EPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLN 152
D V+ +I + V A+ Y + + D TF+ ++ D + L
Sbjct: 536 PWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILK 594
Query: 153 VYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYI 212
++D MK G+KP+L + N ++ + K A I +M I P+ TY L
Sbjct: 595 LWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTS- 653
Query: 213 GGYLREDAL-GIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPD 271
+ R DA+ + + I ++ + N L++ +G +A + D+++ G + PD
Sbjct: 654 SKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARG-FIPD 712
Query: 272 ESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
TF+SL+ Y + V +A + + M+E+G PN+ +++
Sbjct: 713 TVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIR 756
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 107/488 (21%), Positives = 204/488 (41%), Gaps = 57/488 (11%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
YN ++ K + E A F + + K D T+ ++ + +A E +E M
Sbjct: 246 YNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESME 305
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
D T +I + A+ +D A +L+ + K R FS+L+ G D
Sbjct: 306 KTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLD 365
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+ VY +M+ G +P+ + +L+ + +A K A +++EMK++G P++ Y+ ++
Sbjct: 366 TSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMII 425
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIY 268
++ E A+ ++++M++ T + LL M A G +D A++I+ + ++G+
Sbjct: 426 ESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGL- 484
Query: 269 QPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXX 328
+P S++ SL+T+ + V A +L EM G+ ++ C
Sbjct: 485 RPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDV--------CASDVLMIYIKDA 536
Query: 329 XXXRGLDW-------GIVPDGHCC-----CCLLNIM--TKTPMEE--------------- 359
L W GI + C+ N + + P+ E
Sbjct: 537 SVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYT 596
Query: 360 --LGKLIDCIEKANE-ELGSVVRY-----------LVEGQEEGDQDFIKETSALLNSTDA 405
L L+ C ++ E +L S++ L G E+ Q + D
Sbjct: 597 SILAHLVRCQDEDKERQLMSILSATKHKAHAFMCGLFTGPEQRKQPVLTFVREFYQGIDY 656
Query: 406 EIK----KPLCNCLIDLCVYLNLPNRARELFDLGSTLEIY-KDVQFRAPTQWSLHLRRLS 460
E++ + N L++ V + NRAR ++ + +++ K + F WSL +R LS
Sbjct: 657 ELEEGAARYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLS 716
Query: 461 VGAAMTAL 468
VGAA+ A+
Sbjct: 717 VGAALIAV 724
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 111/288 (38%), Gaps = 52/288 (18%)
Query: 109 VENVDMAERLYDRAKTENWRLDT-----VTFSAL------IKMYGMLEDYDQCLNVYDDM 157
V+ VD A L+ AK + W L + V F L + + + E+ Q + + D+
Sbjct: 182 VKEVDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDL 241
Query: 158 KVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLR 217
+ YN ++ + +A K +A +++ + +G D TY+ L+ ++ L
Sbjct: 242 -------SFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLP 294
Query: 218 EDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGI---------- 267
A IY M++ + L++ A G LD A ++F+ +K +
Sbjct: 295 YKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSL 354
Query: 268 ------------------------YQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGF 303
++P + F SLI Y+ K+ A + +EM +SGF
Sbjct: 355 VDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGF 414
Query: 304 KPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNI 351
+PN + T +++ + G +P CLL +
Sbjct: 415 RPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEM 462
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 145/293 (49%), Gaps = 1/293 (0%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+++ YN + F ++ KL +M++RK+ P+ VTF+ +I+ A +
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
++M G P+ +T ++I + + ++ A ++ D ++ D +TF+ LI Y
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
D L ++ +M + GV N TYNTL+ ++ K +AK +++EM + PD ++Y
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
LL E AL I+ +++++++ + + + +++ + +D+A ++F +
Sbjct: 477 KILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
G+ + D ++ +I+ +S+A+ + +M E G P+ L++ +
Sbjct: 537 KGV-KLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAH 588
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 140/304 (46%), Gaps = 5/304 (1%)
Query: 4 SETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVT 63
SE +V R + KPT L+ N + A L D M++ +P+ VT
Sbjct: 175 SEALELVDRMVEMGHKPT----LITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVT 230
Query: 64 FATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAK 123
+ ++N + A+E KM + DAV + +I + ++D A L++ +
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 290
Query: 124 TENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPL 183
+ ++ D +T++ LI + +D + DM + PN+ T++ L+ + + K
Sbjct: 291 IKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLR 350
Query: 184 LAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLL 243
A + +EM + GI+P+ ITY++L+ + E+A+ + M + N+L+
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410
Query: 244 SMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGF 303
+ +D+ +E+F ++ G+ + T+++L+ + K+ A+ + EM+
Sbjct: 411 NGYCKANRIDDGLELFREMSLRGVI-ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469
Query: 304 KPNI 307
+P+I
Sbjct: 470 RPDI 473
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 122/304 (40%), Gaps = 1/304 (0%)
Query: 14 LRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARL 73
RD I+ ++ +N K K +E L +M + + T + MINC
Sbjct: 76 FRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCR 135
Query: 74 CSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVT 133
C A K+ G EPD V T++ V A L DR + +T
Sbjct: 136 CRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLIT 195
Query: 134 FSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMK 193
+ L+ + + + D M G +PN TY +L + ++ + LA + +M+
Sbjct: 196 LNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 194 RNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLD 253
I D + YS ++ ++A ++ EM+ + N L+ + G D
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWD 315
Query: 254 EAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPL 313
+ ++ D+ I P+ TFS LI + K+ EA+ +L EM++ G PN L
Sbjct: 316 DGAKLLRDMIKRKI-SPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 314 VKCY 317
+ +
Sbjct: 375 IDGF 378
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 124/300 (41%), Gaps = 3/300 (1%)
Query: 43 EGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATV 102
+ A LF +M+Q + P + F + + + + ++M G T + +
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 103 IFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGV 162
I + R + A + + DTV F+ L+ + + L + D M +G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 163 KPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALG 222
KP L T NTL+ + K A ++ + M G P+ +TY +L A+
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 223 IYREMKENRIGV-TVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITV 281
+ R+M+E I + V ++ +C D G LD A +F +++ G ++ D T+++LI
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKD-GSLDNAFNLFNEMEIKG-FKADIITYNTLIGG 307
Query: 282 YSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPD 341
+ + + +L +MI+ PN+ + L+ + + GI P+
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 127/316 (40%), Gaps = 74/316 (23%)
Query: 12 RYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCA 71
+ LRD IK +V ++V + F K A++L EM+QR + P+ +T+ ++I+
Sbjct: 319 KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 72 RLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVD------------------ 113
+ + A++ + M GC+PD +T +I Y + +D
Sbjct: 379 CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438
Query: 114 -----------------MAERLYDRAKTENWRLDTVTFSALI-------------KMYGM 143
+A++L+ + R D V++ L+ +++G
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK 498
Query: 144 LED----------------------YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARK 181
+E D +++ + + GVK + YN ++ + R
Sbjct: 499 IEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDS 558
Query: 182 PLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNL 241
A +++ +M G +PD +TY+ L+RA++G A + EMK + V +
Sbjct: 559 LSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKM 618
Query: 242 LLSMCA----DVGFLD 253
+++M + D FLD
Sbjct: 619 VINMLSSGELDKSFLD 634
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 149/378 (39%), Gaps = 41/378 (10%)
Query: 9 VVLRYLRD-KIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATM 67
VV + L++ PT L N+ KV K K E + + +E ++ LK T++ M
Sbjct: 470 VVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLK----TYSMM 525
Query: 68 INCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENW 127
IN A FE M G +PD + +I A+ + N+D A + +
Sbjct: 526 INGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRH 585
Query: 128 RLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKL 187
R T TF +I Y D + L V+D M+ G P + T+N L+ + R+ A
Sbjct: 586 RPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVE 645
Query: 188 IYEEMKRNGISP-----------------------------------DYITYSTLLRAYI 212
I +EM G+S D TY LL+A
Sbjct: 646 ILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACC 705
Query: 213 GGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDE 272
+ AL + +EM I + N+L+ A G + EA ++ + +K G+ +PD
Sbjct: 706 KSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGV-KPDI 764
Query: 273 STFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXR 332
T++S I+ S ++ A + EM G KPNI T L+K +
Sbjct: 765 HTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEE 824
Query: 333 GLDWGIVPDGHCCCCLLN 350
GI PD CLL
Sbjct: 825 MKAMGIKPDKAVYHCLLT 842
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/364 (18%), Positives = 153/364 (42%), Gaps = 6/364 (1%)
Query: 3 NSETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNV 62
N + V+ KP+R + + + +K + + D A + F+ M R + P +
Sbjct: 290 NGDNWQAVISAFEKISKPSRTE----FGLMVKFYGRRGDMHRARETFERMRARGITPTSR 345
Query: 63 TFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRA 122
+ ++I+ + D A+ KM G E VT + ++ +++ + + A+ +D A
Sbjct: 346 IYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEA 405
Query: 123 KTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKP 182
K + L+ + +I + + ++ + +M+ G+ + Y+T++
Sbjct: 406 KRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADE 465
Query: 183 LLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLL 242
++++ +K G +P +TY L+ Y AL + R MKE + + +++
Sbjct: 466 KKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMM 525
Query: 243 LSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESG 302
++ + A +FED+ G+ +PD ++++I+ + + A + EM +
Sbjct: 526 INGFVKLKDWANAFAVFEDMVKEGM-KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLR 584
Query: 303 FKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLN-IMTKTPMEELG 361
+P P++ Y G VP H L+N ++ K ME+
Sbjct: 585 HRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAV 644
Query: 362 KLID 365
+++D
Sbjct: 645 EILD 648
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 122/289 (42%), Gaps = 11/289 (3%)
Query: 36 FKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPD 95
+ K D + ++FD M + P TF +IN ++AVE ++M G +
Sbjct: 599 YAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSAN 658
Query: 96 AVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYD 155
T ++ YA V + A + R + E +D T+ AL+K L V
Sbjct: 659 EHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTK 718
Query: 156 DMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGY 215
+M + N YN L+ R A + ++MK+ G+ PD TY++ + A
Sbjct: 719 EMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAG 778
Query: 216 LREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTF 275
A EM+ + + L+ A ++A+ +E++K+ GI +PD++ +
Sbjct: 779 DMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGI-KPDKAVY 837
Query: 276 SSLITVYSCFAKVSEAEAML--------NEMIESGFKPNIFVITPLVKC 316
L+T S ++ S AEA + EM+E+G ++ KC
Sbjct: 838 HCLLT--SLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKC 884
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 92/216 (42%), Gaps = 8/216 (3%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
Y M+ + D A + F + L D T+ ++ A+ ++M
Sbjct: 662 YTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS 721
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
++ +I +AR +V A L + K E + D T+++ I D +
Sbjct: 722 ARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMN 781
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+ ++M+ LGVKPN+ TY TL+ RA P A YEEMK GI PD Y LL
Sbjct: 782 RATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLL 841
Query: 209 -----RAYIG-GYLREDALGIYREMKENRIGVTVDL 238
RA I Y+ + I +EM E G+ VD+
Sbjct: 842 TSLLSRASIAEAYIYSGVMTICKEMVE--AGLIVDM 875
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 115/273 (42%), Gaps = 10/273 (3%)
Query: 40 KDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTC 99
+ E A ++ DEM + + T+ ++ + +A E+F ++ G + D T
Sbjct: 638 RQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTY 697
Query: 100 ATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKV 159
++ A + + A + N ++ ++ LI + D + ++ MK
Sbjct: 698 EALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKK 757
Query: 160 LGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLRED 219
GVKP++ TY + + A +A A EEM+ G+ P+ TY+TL++ + L E
Sbjct: 758 EGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEK 817
Query: 220 ALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEA------VEIFEDIKSSGIYQPDES 273
AL Y EMK I + + LL+ + EA + I +++ +G+
Sbjct: 818 ALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLI----V 873
Query: 274 TFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
+ + C K+ + L E ++ F P+
Sbjct: 874 DMGTAVHWSKCLCKIEASGGELTETLQKTFPPD 906
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 136/290 (46%), Gaps = 9/290 (3%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
Y++ MK+F +C +++ +L DEM++ TF +I ++ VE F K
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSK 214
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
F P + ++ + V+ + + +Y++ + + D +T++ ++ L D
Sbjct: 215 TFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTD 274
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+ + D+M G P+L TYN LL + KPL A + M+ G+ P I ++TL
Sbjct: 275 RLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTL- 333
Query: 209 RAYIGGYLREDALGIYREMKEN--RIGVTVDLC--NLLLSMCADVGFLDEAVEIFEDIKS 264
I G R L + + ++G T D+ ++++ G L++A E+F+++
Sbjct: 334 ---IDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTE 390
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
G P+ T++S+I + K EA A+L EM G PN V + LV
Sbjct: 391 KG-QLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLV 439
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 88/201 (43%), Gaps = 5/201 (2%)
Query: 12 RYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCA 71
R L + +K +L YN+ + A L + M + ++P + F T+I+
Sbjct: 278 RLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGL 337
Query: 72 RLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDT 131
+ + ++ GC PD V +I Y ++ AE ++ + TE +L
Sbjct: 338 SRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMF-KEMTEKGQLPN 396
Query: 132 V-TFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYE 190
V T++++I+ + M + + + +M+ G PN Y+TL+ + A K L A + +
Sbjct: 397 VFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVK 456
Query: 191 EMKRNGISPDYITYSTLLRAY 211
+M G Y+ + L+ Y
Sbjct: 457 DMVEKG---HYVHLISKLKKY 474
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 121/279 (43%), Gaps = 5/279 (1%)
Query: 41 DFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCA 100
F A LF M+ + P + F +++ + D + FE+M G P TC
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 101 TVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVL 160
V+ A + + D VTF++L+ Y + + ++D + +
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 161 GVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAY--IGGYLRE 218
G KPN+ TY TL+ + + R A ++ +M NG P+ +TY+ L+ IG +
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRW--G 240
Query: 219 DALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSL 278
DA + R+M + RI V L+ VG L EA E++ + +Y PD T+ SL
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVY-PDVFTYGSL 299
Query: 279 ITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
I + + EA M M +G PN + T L+ +
Sbjct: 300 INGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGF 338
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 133/285 (46%), Gaps = 1/285 (0%)
Query: 33 MKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGC 92
+ V K ++ LF++M + P T +++C L S RA + KM G
Sbjct: 90 LSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGF 149
Query: 93 EPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLN 152
EPD VT +++ Y ++ A L+D+ ++ + VT++ LI+ + +
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 153 VYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYI 212
+++ M G +PN+ TYN L+ + + A + +M + I P+ IT++ L+ A++
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 213 GGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDE 272
+A +Y M + + V L++ G LDEA ++F ++ +G Y P+E
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCY-PNE 328
Query: 273 STFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+++LI + +V + + EM + G N T L++ Y
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGY 373
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 136/293 (46%), Gaps = 36/293 (12%)
Query: 14 LRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARL 73
LRD +K ++ + + F K A++L++ M+Q + PD T+ ++IN +
Sbjct: 246 LRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305
Query: 74 CSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVT 133
+ D A + F M GC P+ V T+I + + + V+ +++ + +T+T
Sbjct: 306 YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365
Query: 134 FSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMK 193
++ LI+ Y ++ D V++ M P++ TYN LL + K A +I+E M+
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMR 425
Query: 194 RNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLD 253
+ + + +TY+ +++ MC +G ++
Sbjct: 426 KREMDINIVTYTIIIQG----------------------------------MC-KLGKVE 450
Query: 254 EAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
+A ++F + S G+ +P+ T++++I+ + + EA+++ +M E GF PN
Sbjct: 451 DAFDLFCSLFSKGM-KPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 128/291 (43%), Gaps = 1/291 (0%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+LV + + + E A LFD++L KP+ VT+ T+I C + AVE F
Sbjct: 152 DLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELF 211
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
+M G P+ VT ++ + A L + +TF+ALI + +
Sbjct: 212 NQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKV 271
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
+ +Y+ M + V P++ TY +L+ + A+ ++ M+RNG P+ + Y
Sbjct: 272 GKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIY 331
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
+TL+ + ED + I+ EM + + +L+ VG D A E+F + S
Sbjct: 332 TTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM-S 390
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
S PD T++ L+ C KV +A + M + NI T +++
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQ 441
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 134/307 (43%), Gaps = 39/307 (12%)
Query: 10 VLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDN-------- 61
VL ++DK P + LY++ ++ F + ++ EKLF E +KL D
Sbjct: 270 VLEEMKDKGIPESSE---LYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVL 326
Query: 62 --VTFATMINCARLCSMSDRA------------VEWFEKMPGFG-------------CEP 94
V M + + +A V F K GF CE
Sbjct: 327 MYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEA 386
Query: 95 DAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVY 154
VT A I AY R+E + AE L+D + + V +S ++ MYG + +
Sbjct: 387 GQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLM 446
Query: 155 DDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGG 214
MK G KPN+ YN+L+ RA A+ I++EMKR + PD ++Y++++ AY
Sbjct: 447 AKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRS 506
Query: 215 YLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDEST 274
E + +Y+E + NR + + +++ + + +DE + + +D+K G + D
Sbjct: 507 KELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGT-RLDARL 565
Query: 275 FSSLITV 281
+SS +
Sbjct: 566 YSSALNA 572
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 75/162 (46%)
Query: 18 IKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMS 77
+K K +V Y+ M ++ K + A +L +M QR KP+ + ++I+
Sbjct: 415 VKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDL 474
Query: 78 DRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSAL 137
RA + +++M PD V+ ++I AY R + ++ LY + ++D +
Sbjct: 475 RRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIM 534
Query: 138 IKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRA 179
+ ++ D+ + + DMKV G + + Y++ L A+ A
Sbjct: 535 VGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNALRDA 576
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 130/305 (42%), Gaps = 42/305 (13%)
Query: 48 LFDEMLQRKLKPDNVTFATMINCARLCSMS--DRAVEWFEKMPGFGCEPDAVTCATVIFA 105
EML+RK+ PD TF +IN LC+ +++ +KM G P VT TV+
Sbjct: 220 FLKEMLKRKICPDVATFNILINV--LCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 277
Query: 106 YARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPN 165
Y + A L D K++ D T++ LI + + DM+ + PN
Sbjct: 278 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 337
Query: 166 LGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIG-GYLRED----- 219
TYNTL+ K L+A + EM G+SP+++T++ L+ +I G +E
Sbjct: 338 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 397
Query: 220 -----------------------------ALGIYREMKENRIGV-TVDLCNLLLSMCADV 249
A G Y MK N + V + ++ +C +
Sbjct: 398 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN- 456
Query: 250 GFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFV 309
GFLDEAV + ++ GI PD T+S+LI + + A+ ++ + G PN +
Sbjct: 457 GFLDEAVVLLNEMSKDGI-DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 515
Query: 310 ITPLV 314
+ L+
Sbjct: 516 YSTLI 520
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 126/307 (41%), Gaps = 40/307 (13%)
Query: 14 LRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARL 73
LRD K V YN + F A +L +EML L P++VTF +I+
Sbjct: 326 LRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS 385
Query: 74 CSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVT 133
A++ F M G P V+ ++ + D+A Y R K + +T
Sbjct: 386 EGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRIT 445
Query: 134 FSALIKMYGMLED--YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEE 191
++ +I G+ ++ D+ + + ++M G+ P++ TY+ L+ + + AK I
Sbjct: 446 YTGMID--GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 503
Query: 192 MKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGF 251
+ R G+SP+ I YSTL IY C +G
Sbjct: 504 IYRVGLSPNGIIYSTL---------------IYN--------------------CCRMGC 528
Query: 252 LDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVIT 311
L EA+ I+E + G + D TF+ L+T KV+EAE + M G PN
Sbjct: 529 LKEAIRIYEAMILEG-HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD 587
Query: 312 PLVKCYG 318
L+ YG
Sbjct: 588 CLINGYG 594
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 127/288 (44%), Gaps = 14/288 (4%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+ V+YN + K + A LF EM+QR + PD+ T+ ++I + LC +
Sbjct: 652 DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI--SGLCRKGKTVIAIL 709
Query: 85 ---EKMPGFGCEPDAV--TCATVIFAYARVENVDMAERLYDRAKTENWRL--DTVTFSAL 137
E P+ V TC F + +Y R + +N D VT +A+
Sbjct: 710 FAKEAEARGNVLPNKVMYTC----FVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 765
Query: 138 IKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGI 197
I Y + ++ ++ +M PNL TYN LL + + + L+Y + NGI
Sbjct: 766 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 825
Query: 198 SPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVE 257
PD +T +L+ + E L I + + V N+L+S C G ++ A +
Sbjct: 826 LPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFD 885
Query: 258 IFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKP 305
+ + + S GI D+ T ++++V + + E+ +L+EM + G P
Sbjct: 886 LVKVMTSLGI-SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISP 932
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 154/384 (40%), Gaps = 43/384 (11%)
Query: 15 RDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMI-NCARL 73
+D I P ++V Y+ + F K F+ A+++ + + L P+ + ++T+I NC R+
Sbjct: 471 KDGIDP----DIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRM 526
Query: 74 CSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVT 133
+ + A+ +E M G D T ++ + + V AE ++ +TV+
Sbjct: 527 GCLKE-AIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 585
Query: 134 FSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMK 193
F LI YG + + +V+D+M +G P TY +LL + + A+ + +
Sbjct: 586 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 645
Query: 194 RNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRI--------GVTVDLC------ 239
+ D + Y+TLL A A+ ++ EM + I + LC
Sbjct: 646 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 705
Query: 240 -------------NLLLSMCADVGFLD---------EAVEIFEDIKSSGIYQPDESTFSS 277
N+L + F+D + E + + G + PD T ++
Sbjct: 706 IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLG-HTPDIVTTNA 764
Query: 278 LITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWG 337
+I YS K+ + +L EM PN+ L+ Y + G
Sbjct: 765 MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNG 824
Query: 338 IVPDGHCCCCLLNIMTKTPMEELG 361
I+PD C L+ + ++ M E+G
Sbjct: 825 ILPDKLTCHSLVLGICESNMLEIG 848
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 120/288 (41%), Gaps = 1/288 (0%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEK 86
V Y V + K +F+ A + M + + +T+ MI+ D AV +
Sbjct: 409 VSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE 468
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED 146
M G +PD VT + +I + +V A+ + R + + +S LI +
Sbjct: 469 MSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGC 528
Query: 147 YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYST 206
+ + +Y+ M + G + T+N L+ ++ +A K A+ M +GI P+ +++
Sbjct: 529 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 588
Query: 207 LLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSG 266
L+ Y A ++ EM + T LL G L EA + + + +
Sbjct: 589 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 648
Query: 267 IYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
D +++L+T +++A ++ EM++ P+ + T L+
Sbjct: 649 A-AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 695
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 114/294 (38%), Gaps = 70/294 (23%)
Query: 81 VEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAK----------------- 123
++W K PG E D + I + V R+YD A+
Sbjct: 97 LKWVVKQPGL--ETDHIVQLVCITTHILVR-----ARMYDPARHILKELSLMSGKSSFVF 149
Query: 124 ---TENWRL---DTVTFSALIKMY---GMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLP 174
+RL + + LI++Y GM++D L ++ M + G P++ T N +L
Sbjct: 150 GALMTTYRLCNSNPSVYDILIRVYLREGMIQD---SLEIFRLMGLYGFNPSVYTCNAILG 206
Query: 175 AVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGV 234
+V ++ + + +EM + I PD T++ L+ E + + ++M+++
Sbjct: 207 SVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAP 266
Query: 235 TVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGI--------------------------- 267
T+ N +L G A+E+ + +KS G+
Sbjct: 267 TIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLL 326
Query: 268 -------YQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
P+E T+++LI +S KV A +LNEM+ G PN L+
Sbjct: 327 RDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 380
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 121/293 (41%), Gaps = 1/293 (0%)
Query: 23 GKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVE 82
G L YN+ + + K KD + L+ ++ + PD +T +++ +M + ++
Sbjct: 791 GPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLK 850
Query: 83 WFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG 142
+ G E D T +I ++ A L + LD T A++ +
Sbjct: 851 ILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLN 910
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
+ + V +M G+ P Y L+ + R A ++ EEM + I P +
Sbjct: 911 RNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNV 970
Query: 203 TYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDI 262
S ++RA ++A + R M + ++ T+ L+ +C G + EA+E+ +
Sbjct: 971 AESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVM 1030
Query: 263 KSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
+ G+ + D +++ LIT ++ A + EM GF N L++
Sbjct: 1031 SNCGL-KLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIR 1082
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 132/270 (48%), Gaps = 12/270 (4%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMIN--CARLCSMSDRAVEWFEKMPGFGCEPDAVTCATV 102
A+K+FD+M R + P+ VT+ +I+ C R +D A + F +M G PD+V +
Sbjct: 217 AQKMFDDMTGRGISPNRVTYTILISGLCQR--GSADDARKLFYEMQTSGNYPDSVAHNAL 274
Query: 103 IFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGV 162
+ + ++ + A L + + + L +S+LI Y Q +Y +M +
Sbjct: 275 LDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNI 334
Query: 163 KPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALG 222
KP++ Y L+ + +A K A + M GISPD Y+ +++A G L E+
Sbjct: 335 KPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRS 394
Query: 223 IYREMKENRIGVTVDLCN---LLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLI 279
+ EM E D C L+ SMC + G + EA EIF +I+ SG P +TF++LI
Sbjct: 395 LQLEMSETE--SFPDACTHTILICSMCRN-GLVREAEEIFTEIEKSGC-SPSVATFNALI 450
Query: 280 TVYSCFAKVSEAEAMLNEMIESGFKPNIFV 309
++ EA +L++M E G ++F+
Sbjct: 451 DGLCKSGELKEARLLLHKM-EVGRPASLFL 479
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 96/466 (20%), Positives = 172/466 (36%), Gaps = 82/466 (17%)
Query: 47 KLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAY 106
+ +E+ + D+ F +I+ M+++AVE F +M F C PD +F Y
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPD-------VFTY 165
Query: 107 ARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNL 166
+ V M E ++ + VY++M PNL
Sbjct: 166 NVILRVMMREEVF---------------------------FMLAFAVYNEMLKCNCSPNL 198
Query: 167 GTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYRE 226
T+ L+ +Y+ + A+ ++++M GISP+ +TY+ L+ +DA ++ E
Sbjct: 199 YTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYE 258
Query: 227 MKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFA 286
M+ + N LL +G + EA E+ + G + +SSLI
Sbjct: 259 MQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDG-FVLGLRGYSSLIDGLFRAR 317
Query: 287 KVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCC 346
+ ++A + M++ KP+I + T L++ GI PD +C
Sbjct: 318 RYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYN 377
Query: 347 CLLNIMTKTPMEELGKLIDCIEKANEELGSVVRYLVEGQEEGDQDFIKETSALLNSTDAE 406
++ + + E G+ + E + + ++E + E
Sbjct: 378 AVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIF----TE 433
Query: 407 IKKPLC-------NCLID-LC----------------------VYLNLPNRARELFDL-- 434
I+K C N LID LC ++L L + FD
Sbjct: 434 IEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMV 493
Query: 435 --GSTLEIYKDVQFRAPTQWSLHLRRLSVGAAMTALHVWINDLCKA 478
GS L+ Y+D+ A T S + + +V IN C+A
Sbjct: 494 ESGSILKAYRDLAHFADTGSS---------PDIVSYNVLINGFCRA 530
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/322 (19%), Positives = 118/322 (36%), Gaps = 37/322 (11%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCA-RLCSMSDRAVEWFEKM 87
+ V + + K E A + F M + +PD T+ ++ R A + +M
Sbjct: 130 FCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEM 189
Query: 88 PGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDY 147
C P+ T ++ + A++++D + VT++ LI
Sbjct: 190 LKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSA 249
Query: 148 DQCLNVYDDMKVLGVKPN-----------------------------------LGTYNTL 172
D ++ +M+ G P+ L Y++L
Sbjct: 250 DDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSL 309
Query: 173 LPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRI 232
+ ++RAR+ A +Y M + I PD I Y+ L++ EDAL + M I
Sbjct: 310 IDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGI 369
Query: 233 GVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAE 292
N ++ G L+E + ++ + + PD T + LI V EAE
Sbjct: 370 SPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESF-PDACTHTILICSMCRNGLVREAE 428
Query: 293 AMLNEMIESGFKPNIFVITPLV 314
+ E+ +SG P++ L+
Sbjct: 429 EIFTEIEKSGCSPSVATFNALI 450
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 130/298 (43%), Gaps = 59/298 (19%)
Query: 32 AMKVFKKCKDFEG----------------------AEKLFDEMLQRKLKPDNVTFATMIN 69
+++VF K KDF+ A K + M + L P + +I
Sbjct: 105 SLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIK 164
Query: 70 C-ARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWR 128
R D ++ F +MP GC+PD+ T T+I R +D A++L+ ++
Sbjct: 165 ALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCA 224
Query: 129 LDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLI 188
VT+++LI ++ D+ + ++MK G++PN+ TY++L+ + + + L A +
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
Query: 189 YEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCAD 248
+E M G P+ +TY+TL+ G+ +E K
Sbjct: 285 FEMMMARGCRPNMVTYTTLIT------------GLCKEQK-------------------- 312
Query: 249 VGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
+ EAVE+ + + G+ +PD + +I+ + +K EA L+EMI G PN
Sbjct: 313 ---IQEAVELLDRMNLQGL-KPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPN 366
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Query: 178 RARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVD 237
R +P + ++ +MK P Y T+L + A Y+ M+E + TV
Sbjct: 98 RVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVA 157
Query: 238 LCNLLL-SMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLN 296
N+L+ ++C + G +D ++IF ++ G PD T+ +LI+ F ++ EA+ +
Sbjct: 158 SLNVLIKALCRNDGTVDAGLKIFLEMPKRGC-DPDSYTYGTLISGLCRFGRIDEAKKLFT 216
Query: 297 EMIESGFKPNIFVITPLV 314
EM+E P + T L+
Sbjct: 217 EMVEKDCAPTVVTYTSLI 234
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 131/283 (46%), Gaps = 12/283 (4%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
YN + + E ++L+ EML+ + PD TF T++N A ++ +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE--D 146
GC+PD T + I + R + VD A +++ + V+++ LI YG+ E
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLI--YGLFEAKK 240
Query: 147 YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYST 206
D+ L++ MK PN+ TY L+ A+ + + A ++++M +GI PD Y+
Sbjct: 241 IDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTV 300
Query: 207 LLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSG 266
L++++ G ++A G+ M EN + V N L+ GF + V + S
Sbjct: 301 LIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIK-----GFCKKNVHKAMGLLSKM 355
Query: 267 IYQ---PDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
+ Q PD T+++LI + A +L+ M ESG PN
Sbjct: 356 LEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 1/209 (0%)
Query: 107 ARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNL 166
AR V+ +RLY + D TF+ L+ Y L + + G P+
Sbjct: 131 ARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDY 190
Query: 167 GTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYRE 226
TY + + R ++ A +++EM +NG + ++Y+ L+ ++AL + +
Sbjct: 191 FTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVK 250
Query: 227 MKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFA 286
MK++ V +L+ G EA+ +F+ + SGI +PD+ ++ LI +
Sbjct: 251 MKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGI-KPDDCMYTVLIQSFCSGD 309
Query: 287 KVSEAEAMLNEMIESGFKPNIFVITPLVK 315
+ EA +L M+E+G PN+ L+K
Sbjct: 310 TLDEASGLLEHMLENGLMPNVITYNALIK 338
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 128/277 (46%), Gaps = 4/277 (1%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
+N + K ++ A+K+FD+M +++ +PD ++ ++ R E +M
Sbjct: 200 FNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMK 259
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
G EPD V +I A+ + + + A R ++ + N + F +LI G + +
Sbjct: 260 DEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLN 319
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
L ++ K G TYN L+ A +++ A +EM+ G+ P+ TY +L
Sbjct: 320 DALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIIL 379
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIY 268
I ++A +Y+ M TV +++ M + LD A++I++++K G+
Sbjct: 380 HHLIRMQRSKEAYEVYQTMS---CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVL 436
Query: 269 QPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKP 305
P FSSLIT K+ EA NEM++ G +P
Sbjct: 437 -PGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRP 472
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 4/228 (1%)
Query: 51 EMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVE 110
EM +PD V + +IN + A+ +F +M C+P ++I +
Sbjct: 257 EMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEK 316
Query: 111 NVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYN 170
++ A ++R+K+ + L+ T++AL+ Y + + D+M++ GV PN TY+
Sbjct: 317 KLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYD 376
Query: 171 TLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKEN 230
+L + R ++ A +Y+ M P TY ++R + + A+ I+ EMK
Sbjct: 377 IILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGK 433
Query: 231 RIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSL 278
+ + + + L++ LDEA E F ++ GI +P FS L
Sbjct: 434 GVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGI-RPPGHMFSRL 480
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 95/209 (45%), Gaps = 1/209 (0%)
Query: 98 TCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDM 157
T A + YAR V A + + + +++++ F+ ++ + V+D M
Sbjct: 164 TFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKM 223
Query: 158 KVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLR 217
K +P++ +Y LL + L + EMK G PD + Y ++ A+
Sbjct: 224 KKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKY 283
Query: 218 EDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSS 277
E+A+ + EM++ + + L++ L++A+E FE KSSG + + T+++
Sbjct: 284 EEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSG-FPLEAPTYNA 342
Query: 278 LITVYSCFAKVSEAEAMLNEMIESGFKPN 306
L+ Y ++ +A ++EM G PN
Sbjct: 343 LVGAYCWSQRMEDAYKTVDEMRLKGVGPN 371
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 11/207 (5%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++V Y + + K K +E A + F+EM QR KP F ++IN + A+E+F
Sbjct: 266 DVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFF 325
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTE----NWRLDTVTFSALIKM 140
E+ G +A T ++ AY + ++ A + D + + N R + LI+M
Sbjct: 326 ERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRM 385
Query: 141 YGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPD 200
E Y+ VY M +P + TY ++ + +A I++EMK G+ P
Sbjct: 386 QRSKEAYE----VYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPG 438
Query: 201 YITYSTLLRAYIGGYLREDALGIYREM 227
+S+L+ A ++A + EM
Sbjct: 439 MHMFSSLITALCHENKLDEACEYFNEM 465
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 121/278 (43%), Gaps = 6/278 (2%)
Query: 80 AVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTE-NWRLDTVTFSALI 138
A+ +++M F PD TC+ V+ AY R NVD A ++ L+ VT+++LI
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 139 KMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLL--AKLIYEEMKRNG 196
Y M+ D + V M GV N+ TY +L+ +K L+ A+ ++E +K
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGY--CKKGLMEEAEHVFELLKEKK 326
Query: 197 ISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAV 256
+ D Y L+ Y DA+ ++ M E + +CN L++ G L EA
Sbjct: 327 LVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAE 386
Query: 257 EIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKC 316
+IF + + +PD T+++L+ Y V EA + ++M + P + L+K
Sbjct: 387 QIFSRMNDWSL-KPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKG 445
Query: 317 YGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTK 354
Y L G+ D C LL + K
Sbjct: 446 YSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFK 483
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 136/297 (45%), Gaps = 18/297 (6%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
+V YN + + D EG ++ M +R + + VT+ ++I + + A FE
Sbjct: 261 VVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFE 320
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMY---G 142
+ D ++ Y R + A R++D R +T ++LI Y G
Sbjct: 321 LLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSG 380
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
L + +Q ++ M +KP+ TYNTL+ RA A + ++M + + P +
Sbjct: 381 QLVEAEQ---IFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVM 437
Query: 203 TYSTLLRAY--IGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFE 260
TY+ LL+ Y IG + D L +++ M + + C+ LL +G +EA++++E
Sbjct: 438 TYNILLKGYSRIGAF--HDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWE 495
Query: 261 DIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
++ + G+ D T + +I+ KV+EA+ +L+ + NIF P V+ Y
Sbjct: 496 NVLARGLL-TDTITLNVMISGLCKMEKVNEAKEILDNV-------NIFRCKPAVQTY 544
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 121/283 (42%), Gaps = 2/283 (0%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
YN+ +K + + F L+ ML+R + D ++ +T++ + A++ +E +
Sbjct: 439 YNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVL 498
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
G D +T +I ++E V+ A+ + D + T+ AL Y + +
Sbjct: 499 ARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLK 558
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+ V + M+ G+ P + YNTL+ ++ R + E++ G++P TY L+
Sbjct: 559 EAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALI 618
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIY 268
+ + + A EM E I + V++C+ + + + +DEA + + I +
Sbjct: 619 TGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLL 678
Query: 269 QPDESTFSSLI--TVYSCFAKVSEAEAMLNEMIESGFKPNIFV 309
P + + + +C AE++ N + PN V
Sbjct: 679 LPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIV 721
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 124/270 (45%), Gaps = 3/270 (1%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIF 104
AE++F M LKPD+ T+ T+++ D A++ ++M P +T ++
Sbjct: 385 AEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLK 444
Query: 105 AYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKP 164
Y+R+ L+ D ++ S L++ L D+++ + +++++ G+
Sbjct: 445 GYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLT 504
Query: 165 NLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIG-GYLREDALGI 223
+ T N ++ + + K AK I + + P TY L Y G L+E A +
Sbjct: 505 DTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKE-AFAV 563
Query: 224 YREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYS 283
M+ I T+++ N L+S L++ ++ ++++ G+ P +T+ +LIT +
Sbjct: 564 KEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGL-TPTVATYGALITGWC 622
Query: 284 CFAKVSEAEAMLNEMIESGFKPNIFVITPL 313
+ +A A EMIE G N+ + + +
Sbjct: 623 NIGMIDKAYATCFEMIEKGITLNVNICSKI 652
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQR-KLKPDNVTFATMINCARLCSMSDRAVEWFE 85
++YNVA+ K E A KLF ++L + PD T+ +I+ + ++A +
Sbjct: 720 IVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRD 779
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALI 138
+M G P+ VT +I ++ NVD A+RL + + + +T++ LI
Sbjct: 780 EMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLI 832
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
Query: 94 PDAVTCATVIFAYARVENVDMAERLY-DRAKTENWRLDTVTFSALIKMYGMLEDYDQCLN 152
P+ + I + ++ A +L+ D ++ + D T++ LI + D ++
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 153 VYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYI 212
+ D+M + G+ PN+ TYN L+ + + A+ + ++ + GI+P+ ITY+TL+ +
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLV 836
Query: 213 GGYLREDALGIYREMKE 229
+A+ + +M E
Sbjct: 837 KSGNVAEAMRLKEKMIE 853
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 139/291 (47%), Gaps = 8/291 (2%)
Query: 28 LYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKM 87
+YNV + K D E AEKL EM ++ + PD T+ T+I+ SM A+ ++M
Sbjct: 205 VYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRM 264
Query: 88 PGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDY 147
G P+ VT + I ++R + A RL+ K ++ + VT++ LI Y + D
Sbjct: 265 ERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK-DDVTANHVTYTTLIDGYCRMNDI 323
Query: 148 DQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTL 207
D+ L + + M+ G P + TYN++L + + A + EM I PD IT +TL
Sbjct: 324 DEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTL 383
Query: 208 LRAYIGGYLREDALGIYREMKENRIGVTVDLCN---LLLSMCADVGFLDEAVEIFEDIKS 264
+ AY A+ + ++M E+ G+ +D+ + L+ C + + E+F I+
Sbjct: 384 INAYCKIEDMVSAVKVKKKMIES--GLKLDMYSYKALIHGFCKVLELENAKEELFSMIEK 441
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
+ P +T+S L+ + K E +L E + G ++ + L++
Sbjct: 442 G--FSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIR 490
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 123/300 (41%), Gaps = 57/300 (19%)
Query: 35 VFKKCKDFEGAEKLFDEMLQRKL----------------KPDNVTFA---TMINCARLCS 75
+ K K F+ A +L D++ QR+L P++V+ MI A+
Sbjct: 89 ILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGM 148
Query: 76 MSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFS 135
++D V FE++ G +P C ++ N + +RL D W++ F
Sbjct: 149 INDSIVV-FEQIRSCGLKPHLQACTVLL-------NSLVKQRLTDTV----WKI----FK 192
Query: 136 ALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRN 195
++K LGV N+ YN L+ A ++ P A+ + EM+
Sbjct: 193 KMVK--------------------LGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEK 232
Query: 196 GISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEA 255
G+ PD TY+TL+ Y + +AL + M+ + + + N + + G + EA
Sbjct: 233 GVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREA 292
Query: 256 VEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
+F +IK + T+++LI Y + EA + M GF P + +++
Sbjct: 293 TRLFREIKDD--VTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILR 350
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 130/316 (41%), Gaps = 10/316 (3%)
Query: 5 ETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTF 64
E V R R + P +V YN + F + A +LF E ++ + ++VT+
Sbjct: 256 EALSVQDRMERSGVAPN----IVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTY 310
Query: 65 ATMINCARLCSMSD--RAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRA 122
T+I+ C M+D A+ E M G P VT +++ + A RL
Sbjct: 311 TTLIDG--YCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEM 368
Query: 123 KTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKP 182
+ D +T + LI Y +ED + V M G+K ++ +Y L+ + +
Sbjct: 369 SGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLEL 428
Query: 183 LLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLL 242
AK M G SP Y TYS L+ + +++ + E ++ + V L L
Sbjct: 429 ENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGL 488
Query: 243 LSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESG 302
+ + +D A +FE ++ G+ D F+++ Y KV+EA A+ + M
Sbjct: 489 IRRICKLEQVDYAKVLFESMEKKGLV-GDSVIFTTMAYAYWRTGKVTEASALFDVMYNRR 547
Query: 303 FKPNIFVITPLVKCYG 318
N+ + + Y
Sbjct: 548 LMVNLKLYKSISASYA 563
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 161/373 (43%), Gaps = 29/373 (7%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
Y + ++ + + A LF+EM+ L + V + T++ M D+A++ F +M
Sbjct: 273 YTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMV 332
Query: 89 GFGCEPDAVTCA---TVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
GC P+ T + ++ A ++ +D + R T+ +S L++ L
Sbjct: 333 ETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQG------IYSYLVRTLSKLG 386
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
+ ++ DM VK +Y ++L ++ A K + A + ++ G+ D + Y+
Sbjct: 387 HVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYN 446
Query: 206 TLLRAYIGGYLRE--DALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIK 263
T+ A G L++ ++ +MK++ + N+L++ VG +DEA+ IFE+++
Sbjct: 447 TVFSAL--GKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELE 504
Query: 264 SSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXX 323
S +PD +++SLI V EA EM E G P++ + L++C+G
Sbjct: 505 RSDC-KPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERV 563
Query: 324 XXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPMEELGKLIDCIEKANEELGSVVRYLVE 383
L G P NI+T L+DC+EK +V Y
Sbjct: 564 EMAYSLFEEMLVKGCQP---------NIVT------YNILLDCLEKNGRTAEAVDLYSKM 608
Query: 384 GQEEGDQDFIKET 396
Q+ D I T
Sbjct: 609 KQQGLTPDSITYT 621
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 93/185 (50%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+ ++YN K K LF++M + PD T+ +I D A+ F
Sbjct: 441 DTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIF 500
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
E++ C+PD ++ ++I + +VD A + + + D VT+S L++ +G
Sbjct: 501 EELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKT 560
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
E + +++++M V G +PN+ TYN LL + + + A +Y +MK+ G++PD ITY
Sbjct: 561 ERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITY 620
Query: 205 STLLR 209
+ L R
Sbjct: 621 TVLER 625
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 122/251 (48%), Gaps = 1/251 (0%)
Query: 28 LYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKM 87
+Y+ ++ K A +LF +M +K + ++ +M+ + A+E K+
Sbjct: 374 IYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKI 433
Query: 88 PGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDY 147
G D + TV A +++ + L+++ K + D T++ LI +G + +
Sbjct: 434 HEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEV 493
Query: 148 DQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTL 207
D+ +N++++++ KP++ +YN+L+ + + A + ++EM+ G++PD +TYSTL
Sbjct: 494 DEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTL 553
Query: 208 LRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGI 267
+ + E A ++ EM + N+LL G EAV+++ +K G+
Sbjct: 554 MECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGL 613
Query: 268 YQPDESTFSSL 278
PD T++ L
Sbjct: 614 -TPDSITYTVL 623
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 101/204 (49%), Gaps = 7/204 (3%)
Query: 78 DRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSAL 137
DR + M + T +I + E++ M RL K + ++++ T+ L
Sbjct: 153 DRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRL---VKKWDLKMNSFTYKCL 209
Query: 138 IKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGI 197
++ Y DY + +VY +++ G K ++ YN LL A+ + K A ++E+MK+
Sbjct: 210 LQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEK---ACQVFEDMKKRHC 266
Query: 198 SPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVE 257
D TY+ ++R ++A+G++ EM + + V N L+ + A +D+A++
Sbjct: 267 RRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQ 326
Query: 258 IFEDIKSSGIYQPDESTFSSLITV 281
+F + +G +P+E T+S L+ +
Sbjct: 327 VFSRMVETGC-RPNEYTYSLLLNL 349
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/365 (19%), Positives = 140/365 (38%), Gaps = 36/365 (9%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
Y ++ + + +D+ A ++ E+ + K D + +++ + ++A + FE M
Sbjct: 206 YKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDA---LAKDEKACQVFEDMK 262
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
C D T +I R+ D A L++ TE L+ V ++ L+++ + D
Sbjct: 263 KRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVD 322
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTL------------LPAVYRARKPLLAKLIYEEMKRN- 195
+ + V+ M G +PN TY+ L L V K + + IY + R
Sbjct: 323 KAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTL 382
Query: 196 -------------------GISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTV 236
+ + +Y ++L + G +A+ + ++ E +
Sbjct: 383 SKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDT 442
Query: 237 DLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLN 296
+ N + S + + ++FE +K G PD T++ LI + +V EA +
Sbjct: 443 MMYNTVFSALGKLKQISHIHDLFEKMKKDGP-SPDIFTYNILIASFGRVGEVDEAINIFE 501
Query: 297 EMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTP 356
E+ S KP+I L+ C G + G+ PD L+ KT
Sbjct: 502 ELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTE 561
Query: 357 MEELG 361
E+
Sbjct: 562 RVEMA 566
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 4/126 (3%)
Query: 15 RDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLC 74
R KP +++ YN + K D + A F EM ++ L PD VT++T++ C
Sbjct: 505 RSDCKP----DIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKT 560
Query: 75 SMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTF 134
+ A FE+M GC+P+ VT ++ + A LY + K + D++T+
Sbjct: 561 ERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITY 620
Query: 135 SALIKM 140
+ L ++
Sbjct: 621 TVLERL 626
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 131/287 (45%), Gaps = 42/287 (14%)
Query: 59 PDNVTFATMINCARLCSMSD---RAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMA 115
P +V F + LC+ D +A + ++M G EP+ +I A+ RV NV A
Sbjct: 563 PKSVYFTLFTS---LCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKA 619
Query: 116 ERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLL-- 173
++ T+ D T++ +I Y L + Q +++DMK VKP++ TY+ LL
Sbjct: 620 REFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS 679
Query: 174 -PAVYRARK----PLLAKLIY---------------------EEMKRNGISPDYITYSTL 207
P + R+ ++ ++Y ++MKR I PD +TY+ L
Sbjct: 680 DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVL 739
Query: 208 LRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGI 267
L+ + + REMK + V +L+ +G L EA IF+ + SG+
Sbjct: 740 LK-------NKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGV 792
Query: 268 YQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
PD + +++LI + EA+ + + MIESG KP++ T L+
Sbjct: 793 -DPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALI 838
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 19/284 (6%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
E +Y + + + + A + F+ ++ +K+ PD T+ MIN + +A F
Sbjct: 599 EKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALF 658
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
E M +PD VT Y+ + N D + + + D V ++ +I Y L
Sbjct: 659 EDMKRRDVKPDVVT-------YSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHL 711
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
D + ++ DMK + P++ TY LL KP + + EMK + PD Y
Sbjct: 712 NDLKKVYALFKDMKRREIVPDVVTYTVLL-----KNKP--ERNLSREMKAFDVKPDVFYY 764
Query: 205 STLL--RAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDI 262
+ L+ + IG +A I+ +M E+ + L++ C +G+L EA IF+ +
Sbjct: 765 TVLIDWQCKIGDL--GEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRM 822
Query: 263 KSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
SG+ +PD +++LI V +A ++ EM+E G KP
Sbjct: 823 IESGV-KPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPT 865
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 96/221 (43%)
Query: 43 EGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATV 102
E AE + +M + + PD ++ +I R +AV+ F KM + V +++
Sbjct: 308 EDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSI 367
Query: 103 IFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGV 162
+ Y ++ N A L+ + N LD V ++ G L ++ + ++ +M G+
Sbjct: 368 LQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGI 427
Query: 163 KPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALG 222
P++ Y TL+ K A + EM G +PD + Y+ L L ++A
Sbjct: 428 APDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFE 487
Query: 223 IYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIK 263
+ M+ + T N+++ D G LD+A +E ++
Sbjct: 488 TLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLE 528
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 112/273 (41%), Gaps = 31/273 (11%)
Query: 57 LKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAE 116
+K N + MI R SD V +F ++ G + DA T V+ A R ++ + E
Sbjct: 182 IKALNFLISRMIASGR----SDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELE 237
Query: 117 RLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKP----NLGTYNTL 172
+L R R V + I+ G+ CLN D+ ++P N+ +
Sbjct: 238 KLLSRLLISETRNPCVFYLNFIE--GL------CLNQMTDIAYFLLQPLRDANILVDKSD 289
Query: 173 LPAVYRARKPLLAKLIYE-----------EMKRNGISPDYITYSTLLRAYIGGYLREDAL 221
L YR ++ L YE +M+++GI PD YS ++ + A+
Sbjct: 290 LGIAYRK---VVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAV 346
Query: 222 GIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITV 281
++ +M + R + + + +L +G EA ++F++ + + I D ++
Sbjct: 347 DVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNI-SLDRVCYNVAFDA 405
Query: 282 YSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
KV EA + EM G P++ T L+
Sbjct: 406 LGKLGKVEEAIELFREMTGKGIAPDVINYTTLI 438
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 97/211 (45%), Gaps = 9/211 (4%)
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED 146
M G +PD + +I + + N+ A ++++ + R++ V S++++ Y + +
Sbjct: 317 MEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGN 376
Query: 147 YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYST 206
+ + +++ + + + + YN A+ + K A ++ EM GI+PD I Y+T
Sbjct: 377 FSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTT 436
Query: 207 LLRAYIGGYLRE----DALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDI 262
L IGG + DA + EM + + N+L A G EA E + +
Sbjct: 437 L----IGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMM 492
Query: 263 KSSGIYQPDESTFSSLITVYSCFAKVSEAEA 293
++ G+ +P T + +I ++ +AEA
Sbjct: 493 ENRGV-KPTYVTHNMVIEGLIDAGELDKAEA 522
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 125/353 (35%), Gaps = 72/353 (20%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARL---CS-------- 75
V YNVA K E A +LF EM + + PD + + T+I L CS
Sbjct: 397 VCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIE 456
Query: 76 ------------------------MSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVEN 111
++ A E + M G +P VT VI
Sbjct: 457 MDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGE 516
Query: 112 VDMAERLY------------------------DRAKTENWRLD-----TVTFSALIKMYG 142
+D AE Y D A RL+ +V F+ +
Sbjct: 517 LDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCA 576
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
+ + ++ D M LGV+P Y L+ A R A+ +E + I PD
Sbjct: 577 EKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLF 636
Query: 203 TYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDI 262
TY+ ++ Y + A ++ +MK + V ++LL+ ++ E +E F+ I
Sbjct: 637 TYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKRE-MEAFDVI 695
Query: 263 KSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
PD ++ +I Y + + A+ +M P++ T L+K
Sbjct: 696 -------PDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLK 741
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++V Y + + + D + LF +M +R++ PD VT+ ++ ++S
Sbjct: 697 DVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLS------- 749
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
+M F +PD +I ++ ++ A+R++D+ D ++ALI +
Sbjct: 750 REMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKM 809
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
+ ++D M GVKP++ Y L+ R L A + +EM GI P +
Sbjct: 810 GYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASL 869
Query: 205 STL 207
S +
Sbjct: 870 SAV 872
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/294 (19%), Positives = 122/294 (41%), Gaps = 13/294 (4%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEK 86
V+ + ++ + + +F A LF E + + D V + + + A+E F +
Sbjct: 362 VIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFRE 421
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSAL---IKMYGM 143
M G G PD + T+I A L D V ++ L + G+
Sbjct: 422 MTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGL 481
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYIT 203
++ + L + M+ GVKP T+N ++ + A + A+ YE ++ D
Sbjct: 482 AQEAFETLKM---MENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSREND--- 535
Query: 204 YSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIK 263
+++++ + + A + + E + +V L S+CA+ ++ +A ++ + +
Sbjct: 536 -ASMVKGFCAAGCLDHAFERFIRL-EFPLPKSVYF-TLFTSLCAEKDYISKAQDLLDRMW 592
Query: 264 SSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
G+ +P++S + LI + V +A ++ P++F T ++ Y
Sbjct: 593 KLGV-EPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTY 645
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 147/341 (43%), Gaps = 2/341 (0%)
Query: 15 RDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLC 74
R+ + ++V YN M + K F A LFD++ + P VT+ T+I+
Sbjct: 363 RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCES 422
Query: 75 SMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTF 134
+ A E+M PD +T T++ + + N+ MA +YD + + D +
Sbjct: 423 GNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAY 482
Query: 135 SALIKMYGMLEDYDQCLNVYDDMKVLGVK-PNLGTYNTLLPAVYRARKPLLAKLIYEEMK 193
+ L D D+ ++++M P+L YN + + + + A ++
Sbjct: 483 TTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIF 542
Query: 194 RNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLD 253
R G+ PD++TY+T++R Y+ + A +Y EM R+ +V +L+ A G L+
Sbjct: 543 RVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLE 602
Query: 254 EAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPL 313
+A + ++K G+ +P+ T ++L+ + EA L +M E G PN + T L
Sbjct: 603 QAFQYSTEMKKRGV-RPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTML 661
Query: 314 VKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTK 354
+ LD I PDG+ L + K
Sbjct: 662 ISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 702
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 134/284 (47%), Gaps = 9/284 (3%)
Query: 30 NVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMIN-CARLCSMSDRAVEWFEKMP 88
N+ +KV + + A +++ M++ + P +TF TM++ C + + W E M
Sbjct: 207 NIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLE-MK 265
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
E VT +I +++ ++ A R + + + + +F+ LI+ Y +D
Sbjct: 266 RRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFD 325
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
V D+M G+ P TYN + A+ + A+ + M +PD ++Y+TL+
Sbjct: 326 DAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLM 381
Query: 209 RAYIG-GYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGI 267
YI G E +L ++ +++ I ++ N L+ + G L+ A + E++ + I
Sbjct: 382 HGYIKMGKFVEASL-LFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLI 440
Query: 268 YQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVIT 311
+ PD T+++L+ + +S A + +EM+ G KP+ + T
Sbjct: 441 F-PDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYT 483
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 129/328 (39%), Gaps = 43/328 (13%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEK 86
V YN+ + F K E A + +M + +F +I + D A ++
Sbjct: 274 VTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDE 333
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED 146
M G P T I A +D A L D V+++ L+ Y +
Sbjct: 334 MLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAP----DVVSYNTLMHGYIKMGK 389
Query: 147 YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYST 206
+ + ++DD++ + P++ TYNTL+ + + A+ + EEM I PD ITY+T
Sbjct: 390 FVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTT 449
Query: 207 LLRAYIGGYLREDALGIYREM-----------------KENRIG------------VTVD 237
L++ ++ A +Y EM E R+G V D
Sbjct: 450 LVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATD 509
Query: 238 -------LCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSE 290
+ N+ + VG L +A+E I G+ PD T++++I Y +
Sbjct: 510 HHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLV-PDHVTYTTVIRGYLENGQFKM 568
Query: 291 AEAMLNEMIESGFKPNIFVITPLVKCYG 318
A + +EM+ P+ VIT V YG
Sbjct: 569 ARNLYDEMLRKRLYPS--VITYFVLIYG 594
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 105/240 (43%), Gaps = 5/240 (2%)
Query: 75 SMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTF 134
SM+++ + FEKM G P C V+ ++ A +Y+ +TF
Sbjct: 182 SMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITF 241
Query: 135 SALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKR 194
+ ++ D ++ ++ +MK ++ + TYN L+ + K A+ + +M+R
Sbjct: 242 NTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRR 301
Query: 195 NGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDE 254
+G + +++ L+ Y L +DA G+ EM I T N+ + D G +D+
Sbjct: 302 SGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDD 361
Query: 255 AVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
A E+ S + PD ++++L+ Y K EA + +++ P+I L+
Sbjct: 362 ARELL-----SSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLI 416
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 7/276 (2%)
Query: 43 EGAEKLFDEMLQRKLKPDNVTFATMIN--CARLCSMSDRAVEWFEKMPGFGCEPDAVTCA 100
E A +L +L P+ VTF T+IN C R DRA + F+ M G EPD + +
Sbjct: 268 EVASRLLSLVLDCGPAPNVVTFCTLINGFCKR--GEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 101 TVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVL 160
T+I Y + + M +L+ +A + +LD V FS+ I +Y D VY M
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 161 GVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIG-GYLRED 219
G+ PN+ TY L+ + + + A +Y ++ + G+ P +TYS+L+ + G LR
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS- 444
Query: 220 ALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLI 279
+Y +M + V + +L+ + G + A+ + I + + F+SLI
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSI-RLNVVVFNSLI 503
Query: 280 TVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
+ + EA + M G KP++ T +++
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 149/345 (43%), Gaps = 49/345 (14%)
Query: 6 TAPVVL-RYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTF 64
TA VV R L I P +V Y + +K + A ++ ++L+R ++P VT+
Sbjct: 374 TASVVYKRMLCQGISPN----VVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTY 429
Query: 65 ATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKT 124
+++I+ C +E M G PD V ++ ++ + A R +
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489
Query: 125 ENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLL------PAVYR 178
++ RL+ V F++LI + L +D+ L V+ M + G+KP++ T+ T++ A +
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCK 549
Query: 179 ARKPLLAKLIYEEMKRNGIS-----------------------------------PDYIT 203
KP + +++ M+RN IS PD +T
Sbjct: 550 HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT 609
Query: 204 YSTLLRAYIGGYLREDALGIYREMKENRIGV-TVDLCNLLLSMCADVGFLDEAVEIFEDI 262
Y+T++ Y ++A I+ +K G TV L L+ +C + +D A+ +F +
Sbjct: 610 YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKN-NDMDGAIRMFSIM 668
Query: 263 KSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNI 307
G +P+ T+ L+ +S + + + EM E G P+I
Sbjct: 669 AEKG-SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSI 712
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 109/226 (48%), Gaps = 1/226 (0%)
Query: 47 KLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAY 106
+LFD M + K+ D +I+ C + A ++F + EPD VT T+I Y
Sbjct: 558 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY 617
Query: 107 ARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNL 166
+ +D AER+++ K + +TVT + LI + D D + ++ M G KPN
Sbjct: 618 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 677
Query: 167 GTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYRE 226
TY L+ ++ + ++EEM+ GISP ++YS ++ ++A I+ +
Sbjct: 678 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 737
Query: 227 MKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDE 272
+ ++ V +L+ VG L EA ++E + +G+ +PD+
Sbjct: 738 AIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV-KPDD 782
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 143/305 (46%), Gaps = 25/305 (8%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++V+++ + V+ K D A ++ ML + + P+ VT+ +I LC R E F
Sbjct: 355 DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIK--GLCQ-DGRIYEAF 411
Query: 85 E---KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMY 141
++ G EP VT +++I + + N+ LY+ + D V + L+
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD-- 469
Query: 142 GMLEDYDQCLNVYDDMKVLG--VKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISP 199
G+ + + +K+LG ++ N+ +N+L+ R + A ++ M GI P
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 200 DYITYSTLLRAYIGGYLREDA----------LGIYREMKENRIGVTVDLCNLLLSMCADV 249
D T++T++R I EDA L ++ M+ N+I + +CN+++ +
Sbjct: 530 DVATFTTVMRVSI----MEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 585
Query: 250 GFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFV 309
+++A + F ++ G +PD T++++I Y ++ EAE + + + F PN
Sbjct: 586 HRIEDASKFFNNL-IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVT 644
Query: 310 ITPLV 314
+T L+
Sbjct: 645 LTILI 649
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 112/223 (50%), Gaps = 14/223 (6%)
Query: 15 RDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLC 74
R+KI ++ + NV + + KC E A K F+ +++ K++PD VT+ TMI C C
Sbjct: 565 RNKISA----DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI-CG-YC 618
Query: 75 SMS--DRAVEWFE--KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLD 130
S+ D A FE K+ FG P+ VT +I + ++D A R++ + + +
Sbjct: 619 SLRRLDEAERIFELLKVTPFG--PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPN 676
Query: 131 TVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYE 190
VT+ L+ + D + ++++M+ G+ P++ +Y+ ++ + + + A I+
Sbjct: 677 AVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFH 736
Query: 191 EMKRNGISPDYITYSTLLRAYIG-GYLREDALGIYREMKENRI 232
+ + PD + Y+ L+R Y G L E AL +Y M N +
Sbjct: 737 QAIDAKLLPDVVAYAILIRGYCKVGRLVEAAL-LYEHMLRNGV 778
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 124/291 (42%), Gaps = 13/291 (4%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDR----- 79
+V++N + + + F+ A K+F M +KPD TF T++ R+ M D
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM---RVSIMEDAFCKHM 551
Query: 80 ----AVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFS 135
++ F+ M D C VI + ++ A + ++ D VT++
Sbjct: 552 KPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYN 611
Query: 136 ALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRN 195
+I Y L D+ +++ +KV PN T L+ + + A ++ M
Sbjct: 612 TMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK 671
Query: 196 GISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEA 255
G P+ +TY L+ + E + ++ EM+E I ++ ++++ G +DEA
Sbjct: 672 GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEA 731
Query: 256 VEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
IF + + PD ++ LI Y ++ EA + M+ +G KP+
Sbjct: 732 TNIFHQAIDAKLL-PDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 121/259 (46%), Gaps = 5/259 (1%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+V + + F K + + A LF M QR ++PD + ++T+I+ M + F
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
+ G + D V ++ I Y + ++ A +Y R + + VT++ LIK G+
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIK--GLC 402
Query: 145 ED--YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
+D + +Y + G++P++ TY++L+ + +YE+M + G PD +
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 203 TYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDI 262
Y L+ L A+ +M I + V + N L+ + DEA+++F +
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 263 KSSGIYQPDESTFSSLITV 281
GI +PD +TF++++ V
Sbjct: 523 GIYGI-KPDVATFTTVMRV 540
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 129/289 (44%), Gaps = 1/289 (0%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
+V+Y +K F + F A ++ EM ++ + PD + ++I D A +
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
+M G +P+A T I Y A++ + + V + LI Y
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
+ + Y M G+ + TY L+ +++ K A+ I+ EM+ GI+PD +Y
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631
Query: 206 TLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSS 265
L+ + + A I+ EM E + V + N+LL G +++A E+ +++
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691
Query: 266 GIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
G++ P+ T+ ++I Y ++EA + +EM G P+ FV T LV
Sbjct: 692 GLH-PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 133/323 (41%), Gaps = 38/323 (11%)
Query: 28 LYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKM 87
+Y+ + V K E A+ LFD M+ L P +A++I + E +M
Sbjct: 349 MYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEM 408
Query: 88 PGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDY 147
T TV+ ++D A + R + V ++ LIK + +
Sbjct: 409 KKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRF 468
Query: 148 DQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTL 207
+ V +MK G+ P++ YN+L+ + +A++ A+ EM NG+ P+ TY
Sbjct: 469 GDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAF 528
Query: 208 LRAYIGGYLREDALGIYREMKE-----NRI------------GVTVDLCNLLLSMCADVG 250
+ YI A +EM+E N++ G ++ C+ SM D G
Sbjct: 529 ISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSM-VDQG 587
Query: 251 FL-------------------DEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEA 291
L D+A EIF +++ GI PD ++ LI +S + +A
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI-APDVFSYGVLINGFSKLGNMQKA 646
Query: 292 EAMLNEMIESGFKPNIFVITPLV 314
++ +EM+E G PN+ + L+
Sbjct: 647 SSIFDEMVEEGLTPNVIIYNMLL 669
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 129/328 (39%), Gaps = 7/328 (2%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
Y +K D +GA + EM+ +P+ V + T+I S A+ ++M
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
G PD ++I ++ + +D A + + T+ A I Y ++
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+M+ GV PN L+ + K + A Y M GI D TY+ L+
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIY 268
+DA I+REM+ I V +L++ + +G + +A IF+++ G+
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL- 658
Query: 269 QPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXX 328
P+ ++ L+ + ++ +A+ +L+EM G PN ++ Y
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718
Query: 329 XXXRGLDWGIVPDGHC------CCCLLN 350
G+VPD CC LN
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLVDGCCRLN 746
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 139/300 (46%), Gaps = 13/300 (4%)
Query: 5 ETAPVVLRYLRDK-IKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVT 63
+ A + R +R K I P ++ Y V + F K + + A +FDEM++ L P+ +
Sbjct: 609 DDAEEIFREMRGKGIAP----DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII 664
Query: 64 FATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAK 123
+ ++ ++A E ++M G P+AVT T+I Y + ++ A RL+D K
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Query: 124 TENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKP- 182
+ D+ ++ L+ L D ++ + ++ K G + +N L+ V++ K
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTE 783
Query: 183 ----LLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDL 238
+L +L+ R G P+ +TY+ ++ E A ++ +M+ + TV
Sbjct: 784 LKTEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVIT 842
Query: 239 CNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEM 298
LL+ +G E +F++ ++GI +PD +S +I + ++A ++++M
Sbjct: 843 YTSLLNGYDKMGRRAEMFPVFDEAIAAGI-EPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 130/325 (40%), Gaps = 12/325 (3%)
Query: 35 VFKKCKDF-------EGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMS--DRAVEWFE 85
+FK K+F +GA KL + M+ + L P T+ +I+ LC + + A
Sbjct: 244 LFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLID--GLCKIKRLEDAKSLLV 301
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
+M G D T + +I + N D A+ L + + + I +
Sbjct: 302 EMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEG 361
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
++ ++D M G+ P Y +L+ R + + EMK+ I TY
Sbjct: 362 VMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYG 421
Query: 206 TLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSS 265
T+++ + A I +EM + V + L+ +A+ + +++K
Sbjct: 422 TVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ 481
Query: 266 GIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXX 325
GI PD ++SLI S ++ EA + L EM+E+G KPN F + Y
Sbjct: 482 GI-APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFAS 540
Query: 326 XXXXXXRGLDWGIVPDGHCCCCLLN 350
+ G++P+ C L+N
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLIN 565
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 117/296 (39%), Gaps = 50/296 (16%)
Query: 95 DAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVY 154
D T +I A+ R NV + + + + + E +R T+ + D L +
Sbjct: 220 DVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE-FRTATL-------------NVDGALKLK 265
Query: 155 DDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGG 214
+ M G+ P TY+ L+ + + ++ AK + EM G+S D TYS L+ + G
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325
Query: 215 YLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDEST 274
+ A G+ EM + I + + + + + + G +++A +F+ + +SG+ P
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLI-PQAQA 384
Query: 275 FSSLITVYSCFAKVSEAEAML-----------------------------------NEMI 299
++SLI Y V + +L EMI
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444
Query: 300 ESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKT 355
SG +PN+ + T L+K + + GI PD C L+ ++K
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKA 500
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 127/286 (44%), Gaps = 1/286 (0%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
Y++ MK+F +C +++ +L DEM+Q TF +I ++ +AV F K
Sbjct: 152 YHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSK 211
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
F P + ++ + V+ + E +Y + + + D +T++ L+ L D
Sbjct: 212 TFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMD 271
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+ ++D+M G P+ TYN LL + + KPL A MK GI P + Y+TL+
Sbjct: 272 RFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLI 331
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIY 268
E EM + V ++++ G LD+A E+F ++ G
Sbjct: 332 DGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKG-Q 390
Query: 269 QPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
P+ T++S+I + EA +L EM G PN V + LV
Sbjct: 391 LPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLV 436
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 103/219 (47%), Gaps = 14/219 (6%)
Query: 14 LRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARL 73
L D P +++ YN+ + + + ++LFDEM + PD+ T+ +++
Sbjct: 246 LEDGFSP----DVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGK 301
Query: 74 CSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVT 133
+ A+ M G +P + T+I +R N++ + D R D V
Sbjct: 302 GNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVC 361
Query: 134 FSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMK 193
++ +I Y + + D+ ++ +M V G PN+ TYN+++ + A + A + +EM+
Sbjct: 362 YTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEME 421
Query: 194 RNGISPDYITYSTLLRAYIGGYLRE-----DALGIYREM 227
G +P+++ YSTL+ YLR+ +A + REM
Sbjct: 422 SRGCNPNFVVYSTLV-----SYLRKAGKLSEARKVIREM 455
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 73/168 (43%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
YN+ + + K A + M + + P + + T+I+ + + ++M
Sbjct: 292 YNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMV 351
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
GC PD V +I Y +D A+ ++ + + T++++I+ M ++
Sbjct: 352 KAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFR 411
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNG 196
+ + +M+ G PN Y+TL+ + +A K A+ + EM + G
Sbjct: 412 EACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 130/294 (44%), Gaps = 39/294 (13%)
Query: 12 RYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCA 71
R +RD + ++ + + VF K F A KL++EM +R + PD T+ ++IN
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 72 RLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDT 131
+ D A + + M GC PD VT T+I + + + VD +L+ DT
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349
Query: 132 VTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEE 191
+T YNT++ ++A +P A+ I+
Sbjct: 350 IT-----------------------------------YNTIIQGYFQAGRPDAAQEIFSR 374
Query: 192 MKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGF 251
M P+ TYS LL + E AL ++ M+++ I + + N+++ +G
Sbjct: 375 MDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGN 431
Query: 252 LDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKP 305
+++A ++F + G+ +PD +++++I+ + + +++ + +M E G P
Sbjct: 432 VEDAWDLFRSLSCKGL-KPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 125/295 (42%), Gaps = 36/295 (12%)
Query: 23 GKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVE 82
G +L YN+ + +C F A + +M++ +PD VT +++IN + A++
Sbjct: 101 GHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAID 160
Query: 83 WFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG 142
KM G PD V T+I ++ V+ A L+DR + + R D VT+++L+
Sbjct: 161 LVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLC 220
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
+ + DM + + PN+ T+ ++ + K A +YEEM R + PD
Sbjct: 221 CSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 280
Query: 203 TYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDI 262
TY++L+ +C G +DEA ++ + +
Sbjct: 281 TYNSLING----------------------------------LCMH-GRVDEAKQMLDLM 305
Query: 263 KSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ G PD T+++LI + +V E + EM + G + +++ Y
Sbjct: 306 VTKGCL-PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 359
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 100/234 (42%), Gaps = 1/234 (0%)
Query: 81 VEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKM 140
++ F KM P V + V+ A+ +N D+ L+ + D +++ +I
Sbjct: 54 IDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINC 113
Query: 141 YGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPD 200
+ L+V M G +P++ T ++L+ + + A + +M+ G PD
Sbjct: 114 LCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPD 173
Query: 201 YITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFE 260
+ Y+T++ L DA+ ++ M+ + + N L++ G +A +
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR 233
Query: 261 DIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
D+ I P+ TF+++I V+ K SEA + EM P++F L+
Sbjct: 234 DMVMRDIV-PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 126/254 (49%), Gaps = 5/254 (1%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
YN + F K + + A ++EM + P+ +T+ +++N + D+A+E ++M
Sbjct: 587 YNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMK 646
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
G + D +I + + N++ A L+ E +++LI + L +
Sbjct: 647 NKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMV 706
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
L++Y M G++ +LGTY TL+ + + +LA +Y EM+ G+ PD I Y+ ++
Sbjct: 707 AALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIV 766
Query: 209 RAYI--GGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSG 266
G +++ + ++ EMK+N + V + N +++ G LDEA + +++ G
Sbjct: 767 NGLSKKGQFVK--VVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKG 824
Query: 267 IYQPDESTFSSLIT 280
I PD +TF L++
Sbjct: 825 IL-PDGATFDILVS 837
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 125/278 (44%), Gaps = 1/278 (0%)
Query: 38 KCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAV 97
K D A LFD+M + P++VTF+ +I R ++A+E+++KM G P
Sbjct: 351 KNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVF 410
Query: 98 TCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDM 157
T+I + + + + A +L+D + E + + ++ D+ + M
Sbjct: 411 HVHTIIQGWLKGQKHEEALKLFDES-FETGLANVFVCNTILSWLCKQGKTDEATELLSKM 469
Query: 158 KVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLR 217
+ G+ PN+ +YN ++ R + LA++++ + G+ P+ TYS L+ +
Sbjct: 470 ESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDE 529
Query: 218 EDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSS 277
++AL + M + I V + +++ VG +A E+ ++ +++S
Sbjct: 530 QNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNS 589
Query: 278 LITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
+I + ++ A A EM +G PN+ T L+
Sbjct: 590 IIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMN 627
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/355 (19%), Positives = 145/355 (40%), Gaps = 35/355 (9%)
Query: 23 GKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVE 82
G +V YN M + K+ + A +F +L++ LKP+N T++ +I+ A+E
Sbjct: 475 GPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALE 534
Query: 83 WFEKMPGFGCEPDAVTCATVIFAYARVENVDMA-ERLYDRAKTENWRLDTVTFSALIKMY 141
M E + V T+I +V A E L + + + + ++++++I +
Sbjct: 535 VVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGF 594
Query: 142 GMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDY 201
+ D + Y++M G+ PN+ TY +L+ + + + A + +EMK G+ D
Sbjct: 595 FKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDI 654
Query: 202 ITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFED 261
Y L+ + E A ++ E+ E + + + N L+S ++G + A+++++
Sbjct: 655 PAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKK 714
Query: 262 IKSSGI----------------------------------YQPDESTFSSLITVYSCFAK 287
+ G+ PDE ++ ++ S +
Sbjct: 715 MLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQ 774
Query: 288 VSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDG 342
+ M EM ++ PN+ + ++ + LD GI+PDG
Sbjct: 775 FVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDG 829
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 133/306 (43%), Gaps = 38/306 (12%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAV------- 97
A++L+ M+ + DNVT ++ + A+E + G EPD++
Sbjct: 217 AKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQ 276
Query: 98 -----------------------------TCATVIFAYARVENVDMAERLYDRAKTENWR 128
T +VI A + N+D A RL D ++
Sbjct: 277 ACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGIS 336
Query: 129 LDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLI 188
++ V ++LI + D L ++D M+ G PN T++ L+ + + A
Sbjct: 337 MNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEF 396
Query: 189 YEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCAD 248
Y++M+ G++P T+++ ++ G E+AL ++ E E + V +CN +LS
Sbjct: 397 YKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCK 455
Query: 249 VGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIF 308
G DEA E+ ++S GI P+ ++++++ + + A + + ++E G KPN +
Sbjct: 456 QGKTDEATELLSKMESRGI-GPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNY 514
Query: 309 VITPLV 314
+ L+
Sbjct: 515 TYSILI 520
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 3/203 (1%)
Query: 14 LRDKIKPTRGKELVL--YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCA 71
+RD++K +G +L + Y + F K + E A LF E+L+ L P + ++I+
Sbjct: 641 MRDEMK-NKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGF 699
Query: 72 RLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDT 131
R A++ ++KM G D T T+I + N+ +A LY + D
Sbjct: 700 RNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDE 759
Query: 132 VTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEE 191
+ ++ ++ + + + ++++MK V PN+ YN ++ YR A +++E
Sbjct: 760 IIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDE 819
Query: 192 MKRNGISPDYITYSTLLRAYIGG 214
M GI PD T+ L+ +G
Sbjct: 820 MLDKGILPDGATFDILVSGQVGN 842
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 136/292 (46%), Gaps = 5/292 (1%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMS--DRAVEW 83
L YN+ ++ + + +GA ++ ++++ KPD +T+ +I LC S A +
Sbjct: 251 LFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLI--YGLCKNSKFQEAEVY 308
Query: 84 FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGM 143
KM G EPD+ T T+I Y + V +AER+ A + D T+ +LI
Sbjct: 309 LGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCH 368
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYIT 203
+ ++ L ++++ G+KPN+ YNTL+ + L A + EM G+ P+ T
Sbjct: 369 EGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQT 428
Query: 204 YSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIK 263
++ L+ DA G+ + M + N+L+ + ++ A+EI + +
Sbjct: 429 FNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVML 488
Query: 264 SSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
+G+ PD T++SL+ +K + M+E G PN+F L++
Sbjct: 489 DNGV-DPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLE 539
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 146/333 (43%), Gaps = 10/333 (3%)
Query: 18 IKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMS 77
IKP ++LYN +K A +L +EM ++ L P+ TF ++N LC M
Sbjct: 387 IKPN----VILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN--GLCKMG 440
Query: 78 --DRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFS 135
A + M G PD T +I Y+ ++ A + D D T++
Sbjct: 441 CVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYN 500
Query: 136 ALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRN 195
+L+ ++ + Y M G PNL T+N LL ++ R RK A + EEMK
Sbjct: 501 SLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNK 560
Query: 196 GISPDYITYSTLLRAYIGGYLREDALGIYREMKEN-RIGVTVDLCNLLLSMCADVGFLDE 254
++PD +T+ TL+ + + A ++R+M+E ++ + N+++ + +
Sbjct: 561 SVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTM 620
Query: 255 AVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
A ++F+++ + PD T+ ++ + V+ L EM+E+GF P++ + ++
Sbjct: 621 AEKLFQEMVDRCL-GPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVI 679
Query: 315 KCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCC 347
C R + G+VP+ C
Sbjct: 680 NCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTIC 712
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 145/397 (36%), Gaps = 71/397 (17%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
YN M V F+ A K++ M R + PD +F + S A+ M
Sbjct: 114 YNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMS 173
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
GCE + V TV+ + L+ + L TF+ L+++ D
Sbjct: 174 SQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVK 233
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPA-----------------VYRARKP---LLAKLI 188
+C + D + GV PNL TYN + + + KP LI
Sbjct: 234 ECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLI 293
Query: 189 Y---------------EEMKRNGISPDYITYSTLLRAYIGGYLRE-------DAL----- 221
Y +M G+ PD TY+TL+ Y G + + DA+
Sbjct: 294 YGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFV 353
Query: 222 -----------GIYREMKENR------------IGVTVDLCNLLLSMCADVGFLDEAVEI 258
G+ E + NR I V L N L+ ++ G + EA ++
Sbjct: 354 PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQL 413
Query: 259 FEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
++ G+ P+ TF+ L+ VS+A+ ++ MI G+ P+IF L+ Y
Sbjct: 414 ANEMSEKGLI-PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYS 472
Query: 319 XXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKT 355
LD G+ PD + LLN + KT
Sbjct: 473 TQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKT 509
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 127/316 (40%), Gaps = 54/316 (17%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFAT---------MINCAR--- 72
+++ YN + K F+ AE +M+ L+PD+ T+ T M+ A
Sbjct: 285 DVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIV 344
Query: 73 ---------------------LC--SMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYAR- 108
LC ++RA+ F + G G +P+ + T+I +
Sbjct: 345 GDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQ 404
Query: 109 ---VENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPN 165
+E +A + ++ + + + L KM G + D D + V M G P+
Sbjct: 405 GMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKM-GCVSDADGLVKV---MISKGYFPD 460
Query: 166 LGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYR 225
+ T+N L+ K A I + M NG+ PD TY++LL ED + Y+
Sbjct: 461 IFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYK 520
Query: 226 EMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLI------ 279
M E + N+LL LDEA+ + E++K+ + PD TF +LI
Sbjct: 521 TMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV-NPDAVTFGTLIDGFCKN 579
Query: 280 ----TVYSCFAKVSEA 291
Y+ F K+ EA
Sbjct: 580 GDLDGAYTLFRKMEEA 595
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 124/305 (40%), Gaps = 10/305 (3%)
Query: 42 FEGAEKLFDEMLQR--KLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTC 99
FE E++ +M + + V M N R + + AV FE+M + CEP +
Sbjct: 56 FEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQE-AVNVFERMDFYDCEPTVFSY 114
Query: 100 ATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKV 159
++ D A ++Y R + D +F+ +K + L + ++M
Sbjct: 115 NAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSS 174
Query: 160 LGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYI-GGYLRE 218
G + N+ Y T++ Y ++ +M +G+S T++ LLR G ++E
Sbjct: 175 QGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKE 234
Query: 219 DALGIYREMKENRIGVTVDLC--NLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFS 276
+ + +K GV +L NL + G LD AV + + G +PD T++
Sbjct: 235 CEKLLDKVIKR---GVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGP-KPDVITYN 290
Query: 277 SLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDW 336
+LI +K EAE L +M+ G +P+ + L+ Y +
Sbjct: 291 NLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFN 350
Query: 337 GIVPD 341
G VPD
Sbjct: 351 GFVPD 355
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 122/262 (46%), Gaps = 5/262 (1%)
Query: 58 KPDNVTFATMINCARLCSMSDR--AVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMA 115
KPD T+ +IN RLC + AV + ++ G P+ ++ A +I AY + + D+A
Sbjct: 342 KPDVATYNILIN--RLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIA 399
Query: 116 ERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPA 175
+L + + D VT+ LI + D +N+ + GV P+ YN L+
Sbjct: 400 SKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSG 459
Query: 176 VYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVT 235
+ + + L AKL++ EM I PD Y+TL+ +I ++A ++ E + V
Sbjct: 460 LCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVD 519
Query: 236 VDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAML 295
V N ++ G LDEA+ + + PD+ T+S++I Y ++ A +
Sbjct: 520 VVHHNAMIKGFCRSGMLDEALACMNRMNEEHLV-PDKFTYSTIIDGYVKQQDMATAIKIF 578
Query: 296 NEMIESGFKPNIFVITPLVKCY 317
M ++ KPN+ T L+ +
Sbjct: 579 RYMEKNKCKPNVVTYTSLINGF 600
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 111/287 (38%), Gaps = 36/287 (12%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
Y ++ + K K+++ A KL +M +R KPD VT+ +I+ + D AV K+
Sbjct: 383 YAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLI 442
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
G PDA ++ + A+ L+ N D ++ LI + D+D
Sbjct: 443 DRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFD 502
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+ V+ GVK ++ +N ++ R+ A M + PD TYST++
Sbjct: 503 EARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTII 562
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIY 268
Y+ A+ I+R M++N+
Sbjct: 563 DGYVKQQDMATAIKIFRYMEKNKC------------------------------------ 586
Query: 269 QPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
+P+ T++SLI + C AE EM PN+ T L++
Sbjct: 587 KPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIR 633
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 124/280 (44%), Gaps = 23/280 (8%)
Query: 28 LYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKM 87
+Y + F + DF+ A K+F +++ +K D V MI M D A+ +M
Sbjct: 487 VYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRM 546
Query: 88 PGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDY 147
PD T +T+I Y + +++ A +++ + + + VT+++LI + D+
Sbjct: 547 NEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDF 606
Query: 148 DQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEE-MKRNGISPDYITYST 206
+ +M++ + PN+ TY TL+ ++ + L + Y E M N P+ +T++
Sbjct: 607 KMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNC 666
Query: 207 LLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSG 266
LL+ G++++ + + E + G + L S E F +KS G
Sbjct: 667 LLQ----GFVKKTSGKVLAEPDGSNHGQSS-----LFS------------EFFHRMKSDG 705
Query: 267 IYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
+ + ++S + V A ++M++ GF P+
Sbjct: 706 -WSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPD 744
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/327 (19%), Positives = 135/327 (41%), Gaps = 40/327 (12%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAV--E 82
+++ N + + K + A K++DEM R DN ++T I +C+ V +
Sbjct: 169 DVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDN--YSTCILVKGMCNEGKVEVGRK 226
Query: 83 WFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG 142
E G GC P+ V T+I Y ++ +++ A ++ K + + TF +I +
Sbjct: 227 LIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFC 286
Query: 143 MLEDYDQCLNVYDDMKVLGV-----------------------------------KPNLG 167
D+ + ++K G+ KP++
Sbjct: 287 KEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVA 346
Query: 168 TYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREM 227
TYN L+ + + K +A +E + G+ P+ ++Y+ L++AY + A + +M
Sbjct: 347 TYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQM 406
Query: 228 KENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAK 287
E + +L+ G +D+AV + + G+ PD + ++ L++ +
Sbjct: 407 AERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGV-SPDAAIYNMLMSGLCKTGR 465
Query: 288 VSEAEAMLNEMIESGFKPNIFVITPLV 314
A+ + +EM++ P+ +V L+
Sbjct: 466 FLPAKLLFSEMLDRNILPDAYVYATLI 492
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 105/231 (45%), Gaps = 22/231 (9%)
Query: 95 DAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG-------MLEDY 147
+ C++ + AR + E + + EN +L S ++ Y +E Y
Sbjct: 98 NGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIY 157
Query: 148 DQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTL 207
D + +YD + P++ N+LL + ++R+ A+ +Y+EM G S D YST
Sbjct: 158 DYVVELYDSV------PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVD--NYSTC 209
Query: 208 LRAYIGGYLREDALGIYREMKENRIGV----TVDLCNLLLSMCADVGFLDEAVEIFEDIK 263
+ + G E + + R++ E R G + N ++ +G ++ A +F+++K
Sbjct: 210 I--LVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELK 267
Query: 264 SSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
G + P TF ++I + ++ +L+E+ E G + +++ + ++
Sbjct: 268 LKG-FMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNII 317
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 122/290 (42%), Gaps = 10/290 (3%)
Query: 33 MKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPG-FG 91
+K+ + + F E + + +K + + +++ +AVE ++ + +
Sbjct: 106 LKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYD 165
Query: 92 CEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED--YDQ 149
PD + C +++ + + A ++YD +D + L+K GM + +
Sbjct: 166 SVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVK--GMCNEGKVEV 223
Query: 150 CLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLR 209
+ + G PN+ YNT++ + A L+++E+K G P T+ T++
Sbjct: 224 GRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMIN 283
Query: 210 AYI--GGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGI 267
+ G ++ D L E+KE + V+V N ++ G+ + E I ++
Sbjct: 284 GFCKEGDFVASDRL--LSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDC 341
Query: 268 YQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+PD +T++ LI K A L+E + G PN PL++ Y
Sbjct: 342 -KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAY 390
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 125/257 (48%), Gaps = 2/257 (0%)
Query: 58 KPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAER 117
KPD V+F ++ N M D + M C P+ VT +T I + + + +A +
Sbjct: 126 KPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK-CCSPNVVTYSTWIDTFCKSGELQLALK 184
Query: 118 LYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVY 177
+ K + + VTF+ LI Y D + +++Y +M+ + + N+ TY L+
Sbjct: 185 SFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFC 244
Query: 178 RARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVD 237
+ + A+ +Y M + + P+ + Y+T++ + ++A+ +M + + +
Sbjct: 245 KKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDIT 304
Query: 238 LCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNE 297
+++S G L EA EI ED++ S + PD F++++ Y ++ A M ++
Sbjct: 305 AYGVIISGLCGNGKLKEATEIVEDMEKSDLV-PDMVIFTTMMNAYFKSGRMKAAVNMYHK 363
Query: 298 MIESGFKPNIFVITPLV 314
+IE GF+P++ ++ ++
Sbjct: 364 LIERGFEPDVVALSTMI 380
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/370 (19%), Positives = 155/370 (41%), Gaps = 40/370 (10%)
Query: 47 KLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAY 106
K ++ R P +F ++++ A + MP FGCEPD ++ ++I +
Sbjct: 42 KFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGH 101
Query: 107 ARVENVDMAERLYDRAKTENWRL---DTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVK 163
R ++ A + + + + + D V+F++L + ++ D+ VY + +
Sbjct: 102 CRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCS 160
Query: 164 PNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGI 223
PN+ TY+T + ++ + LA + MKR+ +SP+ +T++ L+ Y E A+ +
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 224 YREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSL----- 278
Y+EM+ R+ + V L+ G + A E++ + + +P+ ++++
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRV-EPNSLVYTTIIDGFF 279
Query: 279 -----------------------ITVYSCF-------AKVSEAEAMLNEMIESGFKPNIF 308
IT Y K+ EA ++ +M +S P++
Sbjct: 280 QRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMV 339
Query: 309 VITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPMEELGKLIDCIE 368
+ T ++ Y + ++ G PD +++ + K + CIE
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIE 399
Query: 369 KANEELGSVV 378
KAN+ + +V+
Sbjct: 400 KANDVMYTVL 409
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 128/291 (43%), Gaps = 10/291 (3%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDR--AVEW 83
+V Y+ + F K + + A K F M + L P+ VTF +I+ C D AV
Sbjct: 163 VVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLID--GYCKAGDLEVAVSL 220
Query: 84 FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGM 143
+++M + VT +I + + + AE +Y R + +++ ++ +I +
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYIT 203
D D + M G++ ++ Y ++ + K A I E+M+++ + PD +
Sbjct: 281 RGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVI 340
Query: 204 YSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIK 263
++T++ AY + A+ +Y ++ E V + ++ A G L EA+ F
Sbjct: 341 FTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF---- 396
Query: 264 SSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
I + ++ ++ LI E E + +++ E+G P+ F+ T +
Sbjct: 397 --CIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWI 445
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 104/260 (40%), Gaps = 43/260 (16%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIF 104
A ++ ++M + L PD V F TM+N AV + K+ G EPD V +T+I
Sbjct: 322 ATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMID 381
Query: 105 AYARVENVDMAERL-YDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVK 163
A+ N + E + Y + N + TV AL K D+ + ++ + G+
Sbjct: 382 GIAK--NGQLHEAIVYFCIEKANDVMYTVLIDALCKE----GDFIEVERLFSKISEAGLV 435
Query: 164 PNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGI 223
P+ Y + + + + + A + M + G+ D + Y+TL+
Sbjct: 436 PDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGL------------ 483
Query: 224 YREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYS 283
A G + EA ++F+++ +SGI PD + F LI Y
Sbjct: 484 -----------------------ASKGLMVEARQVFDEMLNSGI-SPDSAVFDLLIRAYE 519
Query: 284 CFAKVSEAEAMLNEMIESGF 303
++ A +L +M G
Sbjct: 520 KEGNMAAASDLLLDMQRRGL 539
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 133/328 (40%), Gaps = 6/328 (1%)
Query: 18 IKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMS 77
I+PT L YN M + AE++F+ M ++KPD VT+ TMI +
Sbjct: 218 IEPT----LYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQT 273
Query: 78 DRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSAL 137
+A+E M G E D +T T+I A + LY + ++ FS +
Sbjct: 274 QKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLV 333
Query: 138 IKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGI 197
I ++ V+++M G KPN+ Y L+ ++ A + M G
Sbjct: 334 IGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGF 393
Query: 198 SPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVE 257
PD +TYS ++ E+AL + + + + + + L+ G +DEA
Sbjct: 394 KPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAER 453
Query: 258 IFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEM-IESGFKPNIFVITPLVKC 316
+FE++ G + D +++LI ++ KV EA A+ M E G ++ T L+
Sbjct: 454 LFEEMSEKGCTR-DSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSG 512
Query: 317 YGXXXXXXXXXXXXXRGLDWGIVPDGHC 344
+D GI P C
Sbjct: 513 MFKEHRNEEALKLWDMMIDKGITPTAAC 540
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 3/242 (1%)
Query: 101 TVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVL 160
+++ A ++VD + K + + +ALIK +G L ++ L V+ MK
Sbjct: 157 SLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKEN 216
Query: 161 GVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDA 220
G++P L TYN L+ + A A+ ++E M+ I PD +TY+T+++ Y + A
Sbjct: 217 GIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKA 276
Query: 221 LGIYREMK-ENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLI 279
+ R+M+ + ++ + AD F V +++++ GI P + FS +I
Sbjct: 277 MEKLRDMETRGHEADKITYMTMIQACYADSDF-GSCVALYQEMDEKGIQVPPHA-FSLVI 334
Query: 280 TVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIV 339
K++E + MI G KPN+ + T L+ Y R +D G
Sbjct: 335 GGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFK 394
Query: 340 PD 341
PD
Sbjct: 395 PD 396
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 124/289 (42%), Gaps = 3/289 (1%)
Query: 30 NVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPG 89
N +K F K E ++ +M + ++P T+ ++N D A FE M
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 90 FGCEPDAVTCATVIFAYARVENVDMA-ERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
+PD VT T+I Y + A E+L D +T D +T+ +I+ D+
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRD-METRGHEADKITYMTMIQACYADSDFG 309
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
C+ +Y +M G++ ++ ++ + + K ++E M R G P+ Y+ L+
Sbjct: 310 SCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLI 369
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIY 268
Y EDA+ + M + V +++++ G ++EA++ F + G+
Sbjct: 370 DGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGL- 428
Query: 269 QPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ +SSLI +V EAE + EM E G + + L+ +
Sbjct: 429 AINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAF 477
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 113/269 (42%), Gaps = 8/269 (2%)
Query: 4 SETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVT 63
+E V +R KP + +Y V + + K E A +L M+ KPD VT
Sbjct: 344 NEGYTVFENMIRKGSKPN----VAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVT 399
Query: 64 FATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAK 123
++ ++N + A+++F G +++ +++I + VD AERL++
Sbjct: 400 YSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMS 459
Query: 124 TENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDM-KVLGVKPNLGTYNTLLPAVYRARKP 182
+ D+ ++ALI + D+ + ++ M + G + TY LL +++ +
Sbjct: 460 EKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRN 519
Query: 183 LLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVD-LCNL 241
A +++ M GI+P + L A I E+ +GV +D C
Sbjct: 520 EEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAP--MGVILDAACED 577
Query: 242 LLSMCADVGFLDEAVEIFEDIKSSGIYQP 270
+++ G + EA ++ + I G P
Sbjct: 578 MINTLCKAGRIKEACKLADGITERGREVP 606
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 110/256 (42%), Gaps = 3/256 (1%)
Query: 48 LFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYA 107
+F+ M+++ KP+ + +I+ + A+ +M G +PD VT + V+
Sbjct: 349 VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 408
Query: 108 RVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLG 167
+ V+ A + + + ++++ +S+LI G D+ ++++M G +
Sbjct: 409 KNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSY 468
Query: 168 TYNTLLPAVYRARKPLLAKLIYEEM-KRNGISPDYITYSTLLRAYIGGYLREDALGIYRE 226
YN L+ A + RK A +++ M + G TY+ LL + E+AL ++
Sbjct: 469 CYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDM 528
Query: 227 MKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFA 286
M + I T L + G + A +I +++ G+ ++ +I
Sbjct: 529 MIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVIL--DAACEDMINTLCKAG 586
Query: 287 KVSEAEAMLNEMIESG 302
++ EA + + + E G
Sbjct: 587 RIKEACKLADGITERG 602
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 2/155 (1%)
Query: 165 NLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIY 224
NL Y +L+ + A+ + + E+K+ + L++++ + E+ L ++
Sbjct: 151 NLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVW 210
Query: 225 REMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSC 284
R+MKEN I T+ N L++ F+D A +FE + SG +PD T++++I Y
Sbjct: 211 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFE-VMESGRIKPDIVTYNTMIKGYCK 269
Query: 285 FAKVSEAEAMLNEMIESGFKPN-IFVITPLVKCYG 318
+ +A L +M G + + I +T + CY
Sbjct: 270 AGQTQKAMEKLRDMETRGHEADKITYMTMIQACYA 304
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 130/281 (46%), Gaps = 2/281 (0%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEK 86
++YN M + K E E LF EM + LKP T+ +++ D +
Sbjct: 380 IVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLRE 439
Query: 87 MPGFGCEPDAVTCATVIFAYARVENV-DMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
M G EP+ + +I AY R + + DMA + R K + + +++ALI Y +
Sbjct: 440 MEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSG 499
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
+++ +++M G+KP++ TY ++L A R+ I++ M R I ITY+
Sbjct: 500 WHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYN 559
Query: 206 TLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSS 265
TLL + L +A + E + + +V N+L++ A G + ++ +++ +
Sbjct: 560 TLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAAL 619
Query: 266 GIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
+ +PD T+S++I + A M++SG P+
Sbjct: 620 NL-KPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPD 659
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 131/295 (44%), Gaps = 36/295 (12%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAV-E 82
+++ LYN A+ + ++ A ++++ M + + PDNVT A +I R S + V E
Sbjct: 271 RDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWE 330
Query: 83 WFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG 142
FEKM G + ++ ++ + A + + + R +T+ ++ L+ Y
Sbjct: 331 IFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYN 390
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
++ ++ +M+ G+KP+ TYN L+ A R +P + + + EM+ G+ P+
Sbjct: 391 KSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVK 450
Query: 203 TYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDI 262
+Y+ L+ AY G ++M D A + F +
Sbjct: 451 SYTCLISAY----------GRTKKMS------------------------DMAADAFLRM 476
Query: 263 KSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
K G+ +P ++++LI YS +A A EM + G KP++ T ++ +
Sbjct: 477 KKVGL-KPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAF 530
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 120/268 (44%), Gaps = 2/268 (0%)
Query: 51 EMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVE 110
EM ++ ++ + + + T+++ + + F +M G +P A T ++ AYAR
Sbjct: 369 EMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRM 428
Query: 111 NVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDY-DQCLNVYDDMKVLGVKPNLGTY 169
D+ E L + + +++ LI YG + D + + MK +G+KP+ +Y
Sbjct: 429 QPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSY 488
Query: 170 NTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKE 229
L+ A + A +EEM + GI P TY+++L A+ + I++ M
Sbjct: 489 TALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLR 548
Query: 230 NRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVS 289
+I T N LL A G EA ++ + G+ QP T++ L+ Y+ + +
Sbjct: 549 EKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGL-QPSVMTYNMLMNAYARGGQDA 607
Query: 290 EAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ +L EM KP+ + ++ +
Sbjct: 608 KLPQLLKEMAALNLKPDSITYSTMIYAF 635
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 97/223 (43%), Gaps = 3/223 (1%)
Query: 130 DTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRA-RKPLLAKLI 188
D ++A I + YD VY+ M + V P+ T L+ + +A R I
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 189 YEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCAD 248
+E+M G+ + L++++ L+E+AL I EM++ I + N L+
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 249 VGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIF 308
++E +F +++ G+ +P +T++ L+ Y+ + E +L EM + G +PN+
Sbjct: 392 SNHIEEVEGLFTEMRDKGL-KPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVK 450
Query: 309 VITPLVKCYGXXXXXX-XXXXXXXRGLDWGIVPDGHCCCCLLN 350
T L+ YG R G+ P H L++
Sbjct: 451 SYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIH 493
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 140/297 (47%), Gaps = 18/297 (6%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMS---DRAVEWFE 85
YN + V KC++F+ +L +EM + + VT TM R + S ++AV+ F
Sbjct: 169 YNAMVDVLGKCRNFDLMWELVNEM-NKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFL 227
Query: 86 KM-PGFGCEPDAVTCATVIFAYARVENVDMAE----RLYDRAKTENWRLDTVTFSALIKM 140
+M +G + D + +++ A + +++ A +L+D K D TF+ LI
Sbjct: 228 EMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKP-----DARTFNILIHG 282
Query: 141 YGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPD 200
+ +D + D MKV P++ TY + + A + + EEM+ NG +P+
Sbjct: 283 FCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPN 342
Query: 201 YITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFE 260
+TY+ ++ + +ALG+Y +MKE+ + L+ + + G +A EIFE
Sbjct: 343 VVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFE 402
Query: 261 DIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIE---SGFKPNIFVITPLV 314
D+ + G+ + D ++++I+ ++ A +L M + PN+ PL+
Sbjct: 403 DMTNQGVRR-DVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLL 458
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 132/325 (40%), Gaps = 31/325 (9%)
Query: 48 LFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYA 107
LF+EM + L D T+ M++ + ++A +WF +M GC P+ VT +I AY
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564
Query: 108 RVENVDMAERLYDRAKTENWRLDTVTFSALIKMY---GMLE----------------DYD 148
+ + V A L++ +E + VT+SALI + G +E D D
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVD 624
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
YDD +PN+ TY LL ++ + A+ + + M G P+ I Y L+
Sbjct: 625 MYFKQYDDN---SERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIY 268
++A + EM E+ T+ + L+ V D A ++ + +
Sbjct: 682 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC- 740
Query: 269 QPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXX 328
P+ ++ +I K EA ++ M E G +PN+ T ++ +G
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLE 800
Query: 329 XXXRGLDWGIVPD--------GHCC 345
R G+ P+ HCC
Sbjct: 801 LLERMGSKGVAPNYVTYRVLIDHCC 825
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 131/297 (44%), Gaps = 21/297 (7%)
Query: 39 CKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMS--DRAVEWFEKMPGFGCEPDA 96
C + AEK + EML + + + ++ C LCS ++A +M G G PD
Sbjct: 426 CDLLDLAEKAYSEMLAAGVVLNKINVSSFTRC--LCSAGKYEKAFSVIREMIGQGFIPDT 483
Query: 97 VTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDD 156
T + V+ +++A L++ K D T++ ++ + +Q +++
Sbjct: 484 STYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNE 543
Query: 157 MKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYL 216
M+ +G PN+ TY L+ A +A+K A ++E M G P+ +TYS L+ +
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603
Query: 217 REDALGIYREMKENRIGVTVDLC-----------NLLLSMCADVGF-----LDEAVEIFE 260
E A I+ M ++ VD+ N++ GF ++EA ++ +
Sbjct: 604 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663
Query: 261 DIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ G +P++ + +LI K+ EA+ + EM E GF ++ + L+ Y
Sbjct: 664 AMSMEGC-EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRY 719
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 131/292 (44%), Gaps = 7/292 (2%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEK 86
++Y+ + K + A+++ EM + T++++I+ D A + K
Sbjct: 675 IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 734
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED 146
M C P+ V +I +V D A +L + + + + VT++A+I +GM+
Sbjct: 735 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794
Query: 147 YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYST 206
+ CL + + M GV PN TY L+ + +A + EEMK+ + T++
Sbjct: 795 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQT----HWPTHTA 850
Query: 207 LLRAYIGGYLRE--DALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
R I G+ +E ++LG+ E+ ++ + + LL+ L+ A+ + E++ +
Sbjct: 851 GYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 910
Query: 265 SGIYQPD-ESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
D ST++SLI KV A + +EM + G P + L+K
Sbjct: 911 FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIK 962
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 120/302 (39%), Gaps = 18/302 (5%)
Query: 59 PDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERL 118
PD V + +I+ S+ + A+++ +M C P+ VT +T++ + + +R+
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359
Query: 119 YDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYR 178
+ E F++L+ Y D+ + M G P YN L+ ++
Sbjct: 360 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICG 419
Query: 179 ARKPL------LAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREM-KENR 231
+ L LA+ Y EM G+ + I S+ R E A + REM +
Sbjct: 420 DKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGF 479
Query: 232 IGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEA 291
I T +L +C + ++ A +FE++K G+ D T++ ++ + + +A
Sbjct: 480 IPDTSTYSKVLNYLC-NASKMELAFLLFEEMKRGGLV-ADVYTYTIMVDSFCKAGLIEQA 537
Query: 292 EAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVP---------DG 342
NEM E G PN+ T L+ Y L G +P DG
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 343 HC 344
HC
Sbjct: 598 HC 599
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 122/292 (41%), Gaps = 17/292 (5%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
+V Y + + K K A +LF+ ML P+ VT++ +I+ ++A + FE
Sbjct: 553 VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFE 612
Query: 86 KMPGFGCEPDA----------------VTCATVIFAYARVENVDMAERLYDRAKTENWRL 129
+M G PD VT ++ + + V+ A +L D E
Sbjct: 613 RMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEP 672
Query: 130 DTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIY 189
+ + + ALI + D+ V +M G L TY++L+ ++ ++ LA +
Sbjct: 673 NQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVL 732
Query: 190 EEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADV 249
+M N +P+ + Y+ ++ ++A + + M+E V ++ +
Sbjct: 733 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMI 792
Query: 250 GFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIES 301
G ++ +E+ E + S G+ P+ T+ LI + A +L EM ++
Sbjct: 793 GKIETCLELLERMGSKGV-APNYVTYRVLIDHCCKNGALDVAHNLLEEMKQT 843
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 100/220 (45%), Gaps = 5/220 (2%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
+V+Y + K + A KL M ++ +P+ VT+ MI+ + + +E E
Sbjct: 744 VVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLE 803
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
+M G P+ VT +I + +D+A L + K +W T + +I+ G +
Sbjct: 804 RMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIE--GFNK 861
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKR-NGISPDY-IT 203
++ + L + D++ P L Y L+ + +A++ +A + EE+ + DY T
Sbjct: 862 EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSST 921
Query: 204 YSTLLRAYIGGYLREDALGIYREM-KENRIGVTVDLCNLL 242
Y++L+ + E A ++ EM K+ I C+L+
Sbjct: 922 YNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLI 961
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 129/286 (45%), Gaps = 27/286 (9%)
Query: 29 YNVAMKVFKKCKDFE--GAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEK 86
+++A++ + KDF + ++ ++Q LK D + A++I+ R S+++ +
Sbjct: 216 FSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIH--REMSLANL------R 267
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED 146
M GF + C FAY+ + E L +TEN+ DTV ++ LI
Sbjct: 268 MDGF-----TLRC----FAYSLCKVGKWREAL-TLVETENFVPDTVFYTKLISGLCEASL 317
Query: 147 YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYST 206
+++ ++ + M+ PN+ TY+TLL ++ K + M G P +++
Sbjct: 318 FEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNS 377
Query: 207 LLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLL-SMCAD-----VGFLDEAVEIFE 260
L+ AY A + ++M + + N+L+ S+C D LD A + +
Sbjct: 378 LVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYS 437
Query: 261 DIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
++ ++G+ ++ SS K +A +++ EMI GF P+
Sbjct: 438 EMLAAGVVL-NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPD 482
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 137/284 (48%), Gaps = 9/284 (3%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
LV +N + K K+ A+++F+ M R PD+ T++ ++ +A E F
Sbjct: 203 LVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREVFR 261
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
+M GC PD VT + ++ + VD A + + T +S L+ YG
Sbjct: 262 EMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTEN 321
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
++ ++ + +M+ G+K ++ +N+L+ A +A + + +EMK G++P+ + +
Sbjct: 322 RLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCN 381
Query: 206 TLLRAYIGGYLREDALGIYREMKENRIGV---TVDLCNLLLSMCADVGFLDEAVEIFEDI 262
+LR I +++A ++R+M I V D +++ M + ++ A ++++ +
Sbjct: 382 IILRHLIERGEKDEAFDVFRKM----IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYM 437
Query: 263 KSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
+ G++ P TFS LI +A +L EMIE G +P+
Sbjct: 438 RKKGVF-PSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPS 480
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 98/221 (44%), Gaps = 2/221 (0%)
Query: 129 LDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLI 188
L+ TF +++ Y + D+ + ++ M+ + PNL +N LL A+ +++ A+ +
Sbjct: 166 LNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEV 225
Query: 189 YEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCAD 248
+E M R+ +PD TYS LL + A ++REM + + ++++ +
Sbjct: 226 FENM-RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCK 284
Query: 249 VGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIF 308
G +DEA+ I + S I +P +S L+ Y ++ EA EM SG K ++
Sbjct: 285 AGRVDEALGIVRSMDPS-ICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVA 343
Query: 309 VITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLL 349
V L+ + G+ P+ C +L
Sbjct: 344 VFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIIL 384
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 6/208 (2%)
Query: 19 KPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSD 78
KPT +Y+V + + E A F EM + +K D F ++I +
Sbjct: 304 KPT----TFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMK 359
Query: 79 RAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALI 138
++M G P++ +C ++ D A ++ R + D T++ +I
Sbjct: 360 NVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVF-RKMIKVCEPDADTYTMVI 418
Query: 139 KMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGIS 198
KM+ ++ + V+ M+ GV P++ T++ L+ + R A ++ EEM GI
Sbjct: 419 KMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIR 478
Query: 199 PDYITYSTLLRAYIGGYLREDALGIYRE 226
P +T+ LR + RED L E
Sbjct: 479 PSGVTFGR-LRQLLIKEEREDVLKFLNE 505
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 120/247 (48%), Gaps = 11/247 (4%)
Query: 38 KCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAV 97
K + AE L +EM + + V F T+I+ M D A ++ M G + D
Sbjct: 376 KVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVF 435
Query: 98 TCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDM 157
TC T+ + R++ D A++ R +L TV+++ LI +Y + ++ ++ +M
Sbjct: 436 TCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEM 495
Query: 158 KVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLR 217
GV+PN TYN ++ A + K A+ + M+ NG+ PD TY++L+
Sbjct: 496 SSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNV 555
Query: 218 EDALGIYREM-----KENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDE 272
++A+ ++ EM +N + TV ++S + G DEA +++++K G Y D
Sbjct: 556 DEAMRLFSEMGLKGLDQNSVTYTV-----MISGLSKAGKSDEAFGLYDEMKRKG-YTIDN 609
Query: 273 STFSSLI 279
+++LI
Sbjct: 610 KVYTALI 616
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 133/290 (45%), Gaps = 5/290 (1%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMI--NCARLCSMSDRAVEWF 84
V Y + M++ K AEKLFDEM +R ++ D + ++I NC R +M RA F
Sbjct: 295 VTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNC-RKGNMK-RAFLLF 352
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
+++ G P + T +I +V + AE L + +++ + V F+ LI Y
Sbjct: 353 DELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRK 412
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
D+ +YD M+ G + ++ T NT+ R ++ AK M G+ ++Y
Sbjct: 413 GMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSY 472
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
+ L+ Y E+A ++ EM + N+++ G + EA ++ ++++
Sbjct: 473 TNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEA 532
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
+G+ PD T++SLI V EA + +EM G N T ++
Sbjct: 533 NGM-DPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMI 581
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 106/242 (43%), Gaps = 1/242 (0%)
Query: 76 MSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFS 135
M + + F+ M G D +C + A + +D+ ++ R ++ + +
Sbjct: 169 MFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLT 228
Query: 136 ALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRN 195
+++ + ++ + + V G+KP TYNT++ A + R + + + MK++
Sbjct: 229 IVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKD 288
Query: 196 GISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEA 255
G+ + +TY+ L+ + DA ++ EM+E I V + L+S G + A
Sbjct: 289 GVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRA 348
Query: 256 VEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
+F+++ G+ P T+ +LI ++ AE ++NEM G V L+
Sbjct: 349 FLLFDELTEKGL-SPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLID 407
Query: 316 CY 317
Y
Sbjct: 408 GY 409
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 118/276 (42%), Gaps = 1/276 (0%)
Query: 42 FEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCAT 101
FE ++FD M+++ L D + + A+ D +E F +M G + +
Sbjct: 170 FEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTI 229
Query: 102 VIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLG 161
V+ R V+ +++L + + + T++ +I Y D+ V MK G
Sbjct: 230 VVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDG 289
Query: 162 VKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDAL 221
V N TY L+ + K A+ +++EM+ GI D Y++L+ + A
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAF 349
Query: 222 GIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITV 281
++ E+ E + + L+ VG + A + +++S G+ + F++LI
Sbjct: 350 LLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGV-NITQVVFNTLIDG 408
Query: 282 YSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
Y V EA + + M + GF+ ++F + C+
Sbjct: 409 YCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCF 444
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 70/151 (46%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEK 86
V Y + V+ K + E A++LF EM + ++P+ +T+ MI A +
Sbjct: 470 VSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRAN 529
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED 146
M G +PD+ T ++I +NVD A RL+ + ++VT++ +I
Sbjct: 530 MEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGK 589
Query: 147 YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVY 177
D+ +YD+MK G + Y L+ +++
Sbjct: 590 SDEAFGLYDEMKRKGYTIDNKVYTALIGSMH 620
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 131/287 (45%), Gaps = 1/287 (0%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
YN + K + + A ++ D+M+ R P+ VT+ T+I+ + + A E +
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
G PD T ++I N +A L++ +++ D T++ LI D
Sbjct: 393 SKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLD 452
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+ LN+ M++ G ++ TYNTL+ +A K A+ I++EM+ +G+S + +TY+TL+
Sbjct: 453 EALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLI 512
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIY 268
EDA + +M N LL+ G + +A +I + + S+G
Sbjct: 513 DGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC- 571
Query: 269 QPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
+PD T+ +LI+ +V A +L + G P+++
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQ 618
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 139/288 (48%), Gaps = 5/288 (1%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSD--RAVEWFEK 86
+N + K + A ++ D MLQ PD T+ ++I + LC + + AVE ++
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI--SGLCKLGEVKEAVEVLDQ 355
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED 146
M C P+ VT T+I + V+ A L ++ D TF++LI+ + +
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 147 YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYST 206
+ + ++++M+ G +P+ TYN L+ ++ K A + ++M+ +G + ITY+T
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 475
Query: 207 LLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSG 266
L+ + +A I+ EM+ + + N L+ +++A ++ + + G
Sbjct: 476 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Query: 267 IYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
+PD+ T++SL+T + + +A ++ M +G +P+I L+
Sbjct: 536 -QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 122/279 (43%), Gaps = 1/279 (0%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEK 86
V YN + K E A +L + + + PD TF ++I L A+E FE+
Sbjct: 366 VTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE 425
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED 146
M GCEPD T +I + +D A + + + +T++ LI +
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485
Query: 147 YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYST 206
+ ++D+M+V GV N TYNTL+ + ++R+ A + ++M G PD TY++
Sbjct: 486 TREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNS 545
Query: 207 LLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSG 266
LL + G + A I + M N + L+S G ++ A ++ I+ G
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605
Query: 267 IYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKP 305
I + ++ +I K +EA + EM+E P
Sbjct: 606 INLTPHA-YNPVIQGLFRKRKTTEAINLFREMLEQNEAP 643
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 117/272 (43%), Gaps = 38/272 (13%)
Query: 79 RAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALI 138
R K P F EP ++ R + D +++ + K+ + T TF LI
Sbjct: 68 RLFNLASKKPNFSPEP--ALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILI 125
Query: 139 KMYGMLEDYDQCLNVYD------------------------------------DMKVLGV 162
+ Y E D+ L+V D M V G+
Sbjct: 126 ESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGI 185
Query: 163 KPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALG 222
KP++ T+N L+ A+ RA + A L+ E+M G+ PD T++T+++ YI + AL
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALR 245
Query: 223 IYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVY 282
I +M E + N+++ G +++A+ +++ + + PD+ TF++L+
Sbjct: 246 IREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGL 305
Query: 283 SCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
V A +++ M++ G+ P+++ ++
Sbjct: 306 CKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 136/306 (44%), Gaps = 16/306 (5%)
Query: 18 IKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMS 77
IKP ++ +NV +K + A + ++M L PD TF T++
Sbjct: 185 IKP----DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDL 240
Query: 78 DRAVEWFEKMPGFGCEPDAVTCATVIFAY---ARVENVDMAERLYDRAKTENWRLDTVTF 134
D A+ E+M FGC V+ ++ + RVE D + + + + + D TF
Sbjct: 241 DGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVE--DALNFIQEMSNQDGFFPDQYTF 298
Query: 135 SALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKR 194
+ L+ + + D M G P++ TYN+++ + + + A + ++M
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMIT 358
Query: 195 NGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLC---NLLLSMCADVGF 251
SP+ +TY+TL+ E+A + R + G+ D+C +L+ +C
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSK--GILPDVCTFNSLIQGLCLTRNH 416
Query: 252 LDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVIT 311
A+E+FE+++S G +PDE T++ LI K+ EA ML +M SG ++
Sbjct: 417 -RVAMELFEEMRSKGC-EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 312 PLVKCY 317
L+ +
Sbjct: 475 TLIDGF 480
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 138/325 (42%), Gaps = 37/325 (11%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
+ M+ + + D +GA ++ ++M++ NV+ +++ + A+ + ++M
Sbjct: 227 FTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMS 286
Query: 89 GF-GCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDY 147
G PD T T++ + +V A + D E + D T++++I L +
Sbjct: 287 NQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV 346
Query: 148 DQCLNVYDDMKVLGVKPNLGTYNTLLPAVYR----------------------------- 178
+ + V D M PN TYNTL+ + +
Sbjct: 347 KEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSL 406
Query: 179 ------ARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRI 232
R +A ++EEM+ G PD TY+ L+ + ++AL + ++M+ +
Sbjct: 407 IQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466
Query: 233 GVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAE 292
+V N L+ EA EIF++++ G+ + + T+++LI +V +A
Sbjct: 467 ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSR-NSVTYNTLIDGLCKSRRVEDAA 525
Query: 293 AMLNEMIESGFKPNIFVITPLVKCY 317
++++MI G KP+ + L+ +
Sbjct: 526 QLMDQMIMEGQKPDKYTYNSLLTHF 550
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 93/202 (46%), Gaps = 9/202 (4%)
Query: 23 GKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVE 82
+ ++ YN + F K AE++FDEM + ++VT+ T+I+ + A +
Sbjct: 467 ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQ 526
Query: 83 WFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIK--- 139
++M G +PD T +++ + R ++ A + + D VT+ LI
Sbjct: 527 LMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC 586
Query: 140 MYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEM-KRNGIS 198
G +E + L MK + + P+ YN ++ ++R RK A ++ EM ++N
Sbjct: 587 KAGRVEVASKLLRSI-QMKGINLTPH--AYNPVIQGLFRKRKTTEAINLFREMLEQNEAP 643
Query: 199 PDYITYSTLLRAYI--GGYLRE 218
PD ++Y + R GG +RE
Sbjct: 644 PDAVSYRIVFRGLCNGGGPIRE 665
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 128/258 (49%), Gaps = 6/258 (2%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++ L+ +++++KC + + L+ + + + + + +INC D F
Sbjct: 628 DVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTF 687
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
E+M +G P+ VT ++ Y + + L+ AK +D ++++ +I YG
Sbjct: 688 EEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHG-VVDVISYNTIIAAYGKN 746
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
+DY + +M+ G +L YNTLL A + ++ + I + MK++ PD+ TY
Sbjct: 747 KDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTY 806
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLC--NLLLSMCADVGFLDEAVEIFEDI 262
+ ++ Y ++ + +E+KE+ G+ DLC N L+ G ++EAV + +++
Sbjct: 807 NIMINIYGEQGWIDEVADVLKELKES--GLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEM 864
Query: 263 KSSGIYQPDESTFSSLIT 280
+ I PD+ T+++L+T
Sbjct: 865 RGRNII-PDKVTYTNLVT 881
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 123/290 (42%), Gaps = 38/290 (13%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQ-RKLKPDNVTFATMINCARLCSMSDRAVEWF 84
V Y++ ++V + ++++ AE L E+ + + F T+I A +WF
Sbjct: 174 FVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWF 233
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
M FG P+ T ++ Y + NV+ AE + + ++ +S++I +Y L
Sbjct: 234 HMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCES-AYSSMITIYTRL 292
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
YD+ V D MK V+ L + +L A + K LA+ I M+ G SP+ I Y
Sbjct: 293 RLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAY 352
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
+TL+ Y + E A G++ LCN+ L
Sbjct: 353 NTLITGYGKIFKMEAAQGLFHR-----------LCNIGL--------------------- 380
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
+PDE+++ S+I + EA+ E+ G+KPN F + L+
Sbjct: 381 ----EPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLI 426
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 140/323 (43%), Gaps = 35/323 (10%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
Y+ + ++ + + ++ AE++ D M Q +++ + M+N + A M
Sbjct: 282 YSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSME 341
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
G P+ + T+I Y ++ ++ A+ L+ R D ++ ++I+ +G ++Y+
Sbjct: 342 AAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYE 401
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTL--LPAVYRARKPLLAKL------------------- 187
+ + Y ++K G KPN TL L A Y R + +
Sbjct: 402 EAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQ 461
Query: 188 IYEEMKR-------------NGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGV 234
YE++ + N I + ++S+L+ AY+ + +D LG+ RE K
Sbjct: 462 AYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAF 521
Query: 235 TVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAM 294
L +LL+ C + G L +AV+I+ K + + S++I +Y+ + SEAE +
Sbjct: 522 ESHLYHLLICSCKESGQLTDAVKIYNH-KMESDEEINLHITSTMIDIYTVMGEFSEAEKL 580
Query: 295 LNEMIESGFKPNIFVITPLVKCY 317
+ SG + + +V+ Y
Sbjct: 581 YLNLKSSGVVLDRIGFSIVVRMY 603
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 123/294 (41%), Gaps = 3/294 (1%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
L + + + ++ +F AEKL+ + + D + F+ ++ + A E
Sbjct: 558 LHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLE 617
Query: 86 KM-PGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
M PD ++ Y + + D + LY R + + ++ +I
Sbjct: 618 IMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARA 677
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
D+ +++M G PN T+N LL +A+ ++ KR+G+ D I+Y
Sbjct: 678 LPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGV-VDVISY 736
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
+T++ AY + + M+ + V+++ N LL +++ I + +K
Sbjct: 737 NTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKK 796
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
S PD T++ +I +Y + E +L E+ ESG P++ L+K YG
Sbjct: 797 S-TSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYG 849
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 91/188 (48%), Gaps = 9/188 (4%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINC----ARLCSMSDRAVE 82
V +NV + V+ K K F+ +LF + +R D +++ T+I +MS A++
Sbjct: 700 VTFNVLLDVYGKAKLFKKVNELF-LLAKRHGVVDVISYNTIIAAYGKNKDYTNMSS-AIK 757
Query: 83 WFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG 142
+ GF +A T++ AY + + ++ + R K D T++ +I +YG
Sbjct: 758 NMQ-FDGFSVSLEAYN--TLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYG 814
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
D+ +V ++K G+ P+L +YNTL+ A A + +EM+ I PD +
Sbjct: 815 EQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKV 874
Query: 203 TYSTLLRA 210
TY+ L+ A
Sbjct: 875 TYTNLVTA 882
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 138/318 (43%), Gaps = 46/318 (14%)
Query: 1 MENSETAPVVLRYLRDKIKPTRGKELVL-YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKP 59
+ P+ L + + K L + V ++ + + L +M +
Sbjct: 50 LRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHC 109
Query: 60 DNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLY 119
F ++I+ R +++RAVE F ++ FGC+P
Sbjct: 110 SEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPS------------------------ 145
Query: 120 DRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRA 179
K N LDT+ I+M M VY DMK G +PN+ TYN LL A+ +
Sbjct: 146 --VKIYNHVLDTLLGENRIQMIYM---------VYRDMKRDGFEPNVFTYNVLLKALCKN 194
Query: 180 RKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIG-GYLREDALGIYREMKENRIGVTVDL 238
K AK + EM G PD ++Y+T++ + G ++E RE+ E R V +
Sbjct: 195 NKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG-----RELAE-RFEPVVSV 248
Query: 239 CNLLLS-MCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNE 297
N L++ +C + + A E+ ++ GI P+ ++S+LI V ++ A + L +
Sbjct: 249 YNALINGLCKEHDY-KGAFELMREMVEKGI-SPNVISYSTLINVLCNSGQIELAFSFLTQ 306
Query: 298 MIESGFKPNIFVITPLVK 315
M++ G PNI+ ++ LVK
Sbjct: 307 MLKRGCHPNIYTLSSLVK 324
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 129/297 (43%), Gaps = 8/297 (2%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
+V YN ++ F + A +F M + P+ T+ ++IN D AV +
Sbjct: 352 VVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWN 411
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
KM GC P+ V ++ A R AE L + EN TF+A IK
Sbjct: 412 KMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAG 471
Query: 146 DYDQCLNVYDDMKVLG-VKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
D V+ M+ PN+ TYN LL + +A + A + E+ G+ TY
Sbjct: 472 RLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTY 531
Query: 205 STLLRAYIGGYLREDALGIY-REMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIK 263
+TLL L AL + + M + + + + ++L+ C G + A ++ D+
Sbjct: 532 NTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQ-GKAERAAQML-DLV 589
Query: 264 SSG--IYQPDESTFSSLITVYSCFAKVSEAEAMLNE-MIESGFKPNIFVITPLVKCY 317
S G ++PD +++++I C + E +L E MI +G P+I + L+ C+
Sbjct: 590 SCGRRKWRPDVISYTNVIWGL-CRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 122/276 (44%), Gaps = 1/276 (0%)
Query: 42 FEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCAT 101
FE A LF EM+ + P V F ++ + + + +KM +G D +
Sbjct: 52 FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111
Query: 102 VIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLG 161
+I + R + A + + + VTF +L+ + ++ ++ M G
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 162 VKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDAL 221
+PN+ YNTL+ + + + +A + EM++ G+ D +TY+TLL DA
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 222 GIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITV 281
+ R+M + I V L+ + G LDEA E+++++ S + P+ T++S+I
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV-DPNNVTYNSIING 290
Query: 282 YSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
++ +A+ + M G PN+ L+ +
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 125/262 (47%), Gaps = 3/262 (1%)
Query: 57 LKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAE 116
+ D +F +I+C CS A+ KM G EP VT +++ + V + A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 117 RLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAV 176
L + + V ++ LI + + L + ++M+ G+ ++ TYNTLL +
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 177 -YRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVT 235
Y R A+++ + MKR+ I+PD +T++ L+ ++ ++A +Y+EM ++ +
Sbjct: 222 CYSGRWSDAARMLRDMMKRS-INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280
Query: 236 VDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAML 295
N +++ G L +A + F+ + S G + P+ T+++LI+ + F V E +
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFDLMASKGCF-PNVVTYNTLISGFCKFRMVDEGMKLF 339
Query: 296 NEMIESGFKPNIFVITPLVKCY 317
M GF +IF L+ Y
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGY 361
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 134/300 (44%), Gaps = 13/300 (4%)
Query: 9 VVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMI 68
+ L L + K G ++V YN + + A ++ +M++R + PD VTF +I
Sbjct: 194 IALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALI 253
Query: 69 NCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWR 128
+ D A E +++M +P+ VT ++I + M RLYD KT +
Sbjct: 254 DVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII------NGLCMHGRLYDAKKTFDLM 307
Query: 129 L------DTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKP 182
+ VT++ LI + D+ + ++ M G ++ TYNTL+ + K
Sbjct: 308 ASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKL 367
Query: 183 LLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLL 242
+A I+ M ++PD IT+ LL E AL + +M+E+ + + N++
Sbjct: 368 RVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIM 427
Query: 243 LSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESG 302
+ +++A E+F + G+ +PD T++ +I EA+ ++ M E G
Sbjct: 428 IHGLCKADKVEKAWELFCRLPVEGV-KPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 110/256 (42%), Gaps = 35/256 (13%)
Query: 12 RYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCA 71
R LRD +K + ++V + + VF K + + A++L+ EM+Q + P+NVT+ ++IN
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
Query: 72 RLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDT 131
+ A + F+ M GC P+ VT T+I + + VD +L+ R E + D
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351
Query: 132 VTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGT----------------------- 168
T++ LI Y + L+++ M V P++ T
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDD 411
Query: 169 ------------YNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYL 216
YN ++ + +A K A ++ + G+ PD TY+ ++
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGP 471
Query: 217 REDALGIYREMKENRI 232
R +A + R MKE I
Sbjct: 472 RREADELIRRMKEEGI 487
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 118/258 (45%), Gaps = 14/258 (5%)
Query: 18 IKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMS 77
+K +V+YN + K + A +L +EM ++ L D VT+ T++
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 78 DRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSAL 137
A M PD VT +I + + N+D A+ LY + + VT++++
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 138 IK---MYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKR 194
I M+G L D + +D M G PN+ TYNTL+ + R +++ M
Sbjct: 288 INGLCMHGRLYDAKK---TFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 195 NGISPDYITYSTLLRAYIG-GYLREDALGIYREMKENRIGVTVDL---CNLLLSMCADVG 250
G + D TY+TL+ Y G LR AL I+ M R VT D+ C LL +C + G
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRV-ALDIFCWMVSRR--VTPDIITHCILLHGLCVN-G 400
Query: 251 FLDEAVEIFEDIKSSGIY 268
++ A+ F+D++ S Y
Sbjct: 401 EIESALVKFDDMRESEKY 418
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 145/324 (44%), Gaps = 46/324 (14%)
Query: 28 LYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKM 87
++N ++ +F C D E A K+FDE R L V++ +IN + +++A+ ++ M
Sbjct: 193 VHNASIHMFASCGDMENARKVFDESPVRDL----VSWNCLINGYKKIGEAEKAIYVYKLM 248
Query: 88 PGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG----- 142
G +PD VT ++ + + + +++ + Y+ K R+ +AL+ M+
Sbjct: 249 ESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDI 308
Query: 143 --------------------MLEDYDQC------LNVYDDMKVLGVKPNLGTYNTLLPAV 176
M+ Y +C ++DDM+ + ++ +N ++
Sbjct: 309 HEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDME----EKDVVLWNAMIGGS 364
Query: 177 YRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTV 236
+A++ A +++EM+ + PD IT L A + + I+R +++ + + V
Sbjct: 365 VQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNV 424
Query: 237 DLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLN 296
L L+ M A G + EA+ +F GI + T++++I + S A + N
Sbjct: 425 ALGTSLVDMYAKCGNISEALSVFH-----GIQTRNSLTYTAIIGGLALHGDASTAISYFN 479
Query: 297 EMIESGFKPNIFVITPLVK--CYG 318
EMI++G P+ L+ C+G
Sbjct: 480 EMIDAGIAPDEITFIGLLSACCHG 503
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 111/268 (41%), Gaps = 42/268 (15%)
Query: 28 LYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSD--------- 78
L N M +F KC D A ++FD + +R + V++ TMI+ C + D
Sbjct: 294 LVNALMDMFSKCGDIHEARRIFDNLEKRTI----VSWTTMISGYARCGLLDVSRKLFDDM 349
Query: 79 ----------------------RAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAE 116
A+ F++M +PD +T + A +++ +D+
Sbjct: 350 EEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGI 409
Query: 117 RLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAV 176
++ + + L+ ++L+ MY + + L+V+ ++ N TY ++ +
Sbjct: 410 WIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQT----RNSLTYTAIIGGL 465
Query: 177 YRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTV 236
A + EM GI+PD IT+ LL A G + + + +MK +R +
Sbjct: 466 ALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMK-SRFNLNP 524
Query: 237 DLCN--LLLSMCADVGFLDEAVEIFEDI 262
L + +++ + G L+EA + E +
Sbjct: 525 QLKHYSIMVDLLGRAGLLEEADRLMESM 552
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 119/245 (48%), Gaps = 4/245 (1%)
Query: 73 LCSMSD--RAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLD 130
LC +D A + +++P G P+ VT T++ Y +++ A+R+ + W D
Sbjct: 201 LCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPD 260
Query: 131 TVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYE 190
T++ L+ Y L + + V DDM+ ++PN TY ++ A+ + +K A+ +++
Sbjct: 261 ATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFD 320
Query: 191 EMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVG 250
EM PD ++ A + ++A G++R+M +N L + L+ G
Sbjct: 321 EMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEG 380
Query: 251 FLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVI 310
+ EA ++F++ + I P T+++LI +++EA + ++M E KPN F
Sbjct: 381 RVTEARKLFDEFEKGSI--PSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTY 438
Query: 311 TPLVK 315
L++
Sbjct: 439 NVLIE 443
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 125/288 (43%), Gaps = 18/288 (6%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
Y +M++F + DF ++R ++ N +I R D F+
Sbjct: 136 YESSMRIFLRIPDFG---------VKRSVRSLNTLLNVLIQNQRF----DLVHAMFKNSK 182
Query: 89 -GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDY 147
FG P+ TC ++ A + +++ A ++ D + + VT++ ++ Y D
Sbjct: 183 ESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDM 242
Query: 148 DQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTL 207
+ V ++M G P+ TY L+ + + A + ++M++N I P+ +TY +
Sbjct: 243 ESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVM 302
Query: 208 LRAYIGGYLREDALGIYREMKENRIGVTVDL-CNLLLSMCADVGFLDEAVEIFEDIKSSG 266
+RA +A ++ EM E L C ++ ++C D +DEA ++ + +
Sbjct: 303 IRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHK-VDEACGLWRKMLKNN 361
Query: 267 IYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
PD + S+LI +V+EA + +E E G P++ L+
Sbjct: 362 C-MPDNALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLI 407
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 116/268 (43%), Gaps = 6/268 (2%)
Query: 88 PGFGCEPDAVTCATVIFAYARVENVDMAERLYD--RAKTENWRLDTVTFSALIKMYGMLE 145
PGF D T +++F +R D E L R + F L++ YG+
Sbjct: 77 PGFTHNYD--TYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAG 134
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRN-GISPDYITY 204
Y+ + ++ + GVK ++ + NTLL + + ++ L +++ K + GI+P+ T
Sbjct: 135 RYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTC 194
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
+ L++A E A + E+ + + +L G ++ A + E++
Sbjct: 195 NLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLD 254
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXX 324
G Y PD +T++ L+ Y + SEA ++++M ++ +PN +++
Sbjct: 255 RGWY-PDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSG 313
Query: 325 XXXXXXXRGLDWGIVPDGHCCCCLLNIM 352
L+ +PD CC +++ +
Sbjct: 314 EARNMFDEMLERSFMPDSSLCCKVIDAL 341
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 95/222 (42%), Gaps = 9/222 (4%)
Query: 4 SETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVT 63
SE A V+ +++I+P V Y V ++ K K A +FDEML+R PD+
Sbjct: 278 SEAATVMDDMEKNEIEPNE----VTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSL 333
Query: 64 FATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAK 123
+I+ D A + KM C PD +T+I + V A +L+D +
Sbjct: 334 CCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFE 393
Query: 124 TENWRLDTVTFSALIKMYGMLE--DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARK 181
+ +T++ LI GM E + + ++DDM KPN TYN L+ + +
Sbjct: 394 KGSIP-SLLTYNTLIA--GMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGN 450
Query: 182 PLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGI 223
+ EEM G P+ T+ L EDA+ I
Sbjct: 451 VKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKI 492
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 84/201 (41%), Gaps = 1/201 (0%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
Y V M + K F A + D+M + +++P+ VT+ MI S A F++M
Sbjct: 264 YTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEML 323
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
PD+ C VI A VD A L+ + N D S LI
Sbjct: 324 ERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVT 383
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+ ++D+ + G P+L TYNTL+ + + A ++++M P+ TY+ L+
Sbjct: 384 EARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLI 442
Query: 209 RAYIGGYLREDALGIYREMKE 229
++ + + EM E
Sbjct: 443 EGLSKNGNVKEGVRVLEEMLE 463
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 120/279 (43%), Gaps = 6/279 (2%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
LV Y + + D E A+++ +EML R PD T+ +++ A +
Sbjct: 226 LVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMD 285
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
M EP+ VT +I A + + A ++D ++ D+ +I + E
Sbjct: 286 DMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVID--ALCE 343
Query: 146 DY--DQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYIT 203
D+ D+ ++ M P+ +TL+ + + + A+ +++E ++ I P +T
Sbjct: 344 DHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLT 402
Query: 204 YSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIK 263
Y+TL+ +A ++ +M E + N+L+ + G + E V + E++
Sbjct: 403 YNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEML 462
Query: 264 SSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESG 302
G + P+++TF L K +A +++ + +G
Sbjct: 463 EIGCF-PNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG 500
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 132/302 (43%), Gaps = 10/302 (3%)
Query: 25 ELVLYNVAMKVFKK-------CKDFE--GAEKLFDEMLQRKLKPDNVTFATMINCARLCS 75
E+V + + M V CK E A LF+ M + L PD V F+ M+
Sbjct: 335 EMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNM 394
Query: 76 MSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFS 135
++A+E++ +M P +V T+I + E+ + A +++ + E+W +
Sbjct: 395 EMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDS-FESWIAHGFMCN 453
Query: 136 ALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRN 195
+ ++ D + M+ G++PN+ YN ++ A R + LA+ I+ EM
Sbjct: 454 KIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEK 513
Query: 196 GISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEA 255
G+ P+ TYS L+ + ++A + +M + + N +++ VG +A
Sbjct: 514 GLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKA 573
Query: 256 VEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
E+ +++ Y ++++S+I + A EM E+G PN+ T L+
Sbjct: 574 KEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLIN 633
Query: 316 CY 317
+
Sbjct: 634 GF 635
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 141/295 (47%), Gaps = 14/295 (4%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVT-FATMINCARLCSMSDRAVEWFE 85
V+YN + K A+++ +++ K + T + ++I+ +D AVE +
Sbjct: 555 VIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYR 614
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
+M G P+ VT ++I + + +D+A + K+ +LD + ALI +
Sbjct: 615 EMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKN 674
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
D ++ ++ LG+ PN+ YN+L+ K A +Y++M +GIS D TY+
Sbjct: 675 DMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYT 734
Query: 206 TLLRAYIGGYLREDALG----IYREMKENRIGVTVD--LCNLLLSMCADVGFLDEAVEIF 259
T+ I G L++ + +Y E+ + +G+ D L +L++ + G +A ++
Sbjct: 735 TM----IDGLLKDGNINLASDLYSELLD--LGIVPDEILHMVLVNGLSKKGQFLKASKML 788
Query: 260 EDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
E++K + P+ +S++I + ++EA + +EM+E G + V LV
Sbjct: 789 EEMKKKDV-TPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLV 842
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 128/278 (46%), Gaps = 7/278 (2%)
Query: 43 EGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSD--RAVEWFEKMPG-FGCEPDAVTC 99
E A K+F ++ R +PD + F+ + A C D A++ +M G G T
Sbjct: 256 EEAVKIFRRVMSRGAEPDGLLFSLAVQAA--CKTPDLVMALDLLREMRGKLGVPASQETY 313
Query: 100 ATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKV 159
+VI A+ + N++ A R+ D + + ++L+ Y + + L++++ M+
Sbjct: 314 TSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEE 373
Query: 160 LGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLRED 219
G+ P+ ++ ++ + + A Y MK I+P + T+++ + E
Sbjct: 374 EGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEA 433
Query: 220 ALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLI 279
AL I+ + E+ I +CN + + G +D A + ++ GI +P+ +++++
Sbjct: 434 ALEIFNDSFESWIAHGF-MCNKIFLLFCKQGKVDAATSFLKMMEQKGI-EPNVVFYNNMM 491
Query: 280 TVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ + A ++ +EM+E G +PN F + L+ +
Sbjct: 492 LAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGF 529
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/336 (19%), Positives = 143/336 (42%), Gaps = 4/336 (1%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIF 104
A++++++M+ + DNVT ++ + + AV+ F ++ G EPD + + +
Sbjct: 223 AKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQ 282
Query: 105 AYARVENVDMAERLYDRAKTE-NWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVK 163
A + ++ MA L + + T++++I + + ++ + V D+M G+
Sbjct: 283 AACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIP 342
Query: 164 PNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGI 223
++ +L+ + + A ++ M+ G++PD + +S ++ + E A+
Sbjct: 343 MSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEF 402
Query: 224 YREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYS 283
Y MK RI + L + ++ C + A+EIF D S I + + ++
Sbjct: 403 YMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHG--FMCNKIFLLFC 460
Query: 284 CFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGH 343
KV A + L M + G +PN+ ++ + L+ G+ P+
Sbjct: 461 KQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNF 520
Query: 344 CCCCLLNIMTKTPMEELG-KLIDCIEKANEELGSVV 378
L++ K E+ +I+ + +N E V+
Sbjct: 521 TYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVI 556
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 111/257 (43%), Gaps = 47/257 (18%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMIN--CAR-------------- 72
YN + F K D + A + + EM + P+ VTF ++IN C
Sbjct: 593 YNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMK 652
Query: 73 -----------------LCSMSD--RAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVD 113
C +D A F ++P G P+ ++I + + +D
Sbjct: 653 SMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMD 712
Query: 114 MAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCL--NVYDDMKVLGVKPNLGTYNT 171
A LY + + D T++ +I G+L+D + L ++Y ++ LG+ P+ +
Sbjct: 713 AAIDLYKKMVNDGISCDLFTYTTMID--GLLKDGNINLASDLYSELLDLGIVPDEILHMV 770
Query: 172 LLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLRE----DALGIYREM 227
L+ + + + L A + EEMK+ ++P+ + YST+ I G+ RE +A ++ EM
Sbjct: 771 LVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTV----IAGHHREGNLNEAFRLHDEM 826
Query: 228 KENRIGVTVDLCNLLLS 244
E I + NLL+S
Sbjct: 827 LEKGIVHDDTVFNLLVS 843
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 81/188 (43%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+L Y + F K D + A LF E+ + L P+ + ++I+ R D A++ +
Sbjct: 659 DLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLY 718
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
+KM G D T T+I + N+++A LY D + L+
Sbjct: 719 KKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKK 778
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
+ + + ++MK V PN+ Y+T++ +R A +++EM GI D +
Sbjct: 779 GQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVF 838
Query: 205 STLLRAYI 212
+ L+ +
Sbjct: 839 NLLVSGRV 846
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 95/228 (41%)
Query: 114 MAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLL 173
M L D +K + L F+ L+ Y + D ++ + M V P + N +L
Sbjct: 152 MVNNLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVL 211
Query: 174 PAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIG 233
++ R+ AK IY +M G++ D +T L+RA + E+A+ I+R +
Sbjct: 212 SSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAE 271
Query: 234 VTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEA 293
L +L + L A+++ +++ + T++S+I + + EA
Sbjct: 272 PDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVR 331
Query: 294 MLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPD 341
+++EM+ G ++ T LV Y R + G+ PD
Sbjct: 332 VMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPD 379
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 127/282 (45%), Gaps = 11/282 (3%)
Query: 81 VEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKM 140
V K PG + ++ + + + N++ AE L D +T++ LIK
Sbjct: 2 VRGLMKFPGISTKLLNIS----VNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKG 57
Query: 141 YGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLI--YEEMKRNGIS 198
Y D+ V M+ G++P++ TYN+L+ A+ +L +++ ++EM +G+S
Sbjct: 58 YTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGA--AKNLMLNRVLQLFDEMLHSGLS 115
Query: 199 PDYITYSTLLRAYIGGYLREDALGIYRE-MKENRIGVTVDLCNLLLSMCADVGFLDEAVE 257
PD +Y+TL+ Y +A I E + + +D N+LL G D A+E
Sbjct: 116 PDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIE 175
Query: 258 IFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+F+ +KS +P+ T++ LI +V + M+ E+ +SG+ PN T ++K Y
Sbjct: 176 LFKHLKSR--VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMY 233
Query: 318 GXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPMEE 359
+ G DG C +++ + KT E
Sbjct: 234 FKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAE 275
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 140/293 (47%), Gaps = 6/293 (2%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+++ YN +K + + + A + M + ++PD T+ ++I+ A M +R ++ F
Sbjct: 47 DVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLF 106
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAER-LYDRAKTENWRLDTVTFSALIKMYGM 143
++M G PD + T++ Y ++ A + L++ T++ L+
Sbjct: 107 DEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCK 166
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYIT 203
D + ++ +K VKP L TYN L+ + ++R+ + E+K++G +P+ +T
Sbjct: 167 SGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVT 225
Query: 204 YSTLLRAYIGGYLREDALGIYREMKENRIGVTVD-LCN-LLLSMCADVGFLDEAVEIFED 261
Y+T+L+ Y E L ++ +MK+ G T D N ++S G +EA E +
Sbjct: 226 YTTMLKMYFKTKRIEKGLQLFLKMKKE--GYTFDGFANCAVVSALIKTGRAEEAYECMHE 283
Query: 262 IKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
+ SG D ++++L+ +Y + + +L E+ G KP+ + T +V
Sbjct: 284 LVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIV 336
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 131/281 (46%), Gaps = 7/281 (2%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMIN-CARLCSMSDRAVEW 83
+++ YN ++ + E A + + + LQ P +T+ ++ R C S RA+E
Sbjct: 208 DVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCG-SARAIEV 266
Query: 84 FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGM 143
E M GC PD VT +++ R N++ + + L+TVT++ L+
Sbjct: 267 LEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCS 326
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLI--YEEMKRNGISPDY 201
E +D+ + + M P + TYN L+ + +AR LL++ I + +M PD
Sbjct: 327 HEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKAR--LLSRAIDFFYQMLEQKCLPDI 384
Query: 202 ITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFED 261
+TY+T+L A + +DA+ + +K + N ++ A G + +A+E++
Sbjct: 385 VTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQ 444
Query: 262 IKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESG 302
+ +GI+ PD+ T SLI + V EA +L E G
Sbjct: 445 MLDAGIF-PDDITRRSLIYGFCRANLVEEAGQVLKETSNRG 484
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 117/263 (44%), Gaps = 42/263 (15%)
Query: 21 TRGKEL--VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSD 78
+ G EL V YN + + ++ E++ + M Q P +T+ +IN +
Sbjct: 307 SHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLS 366
Query: 79 RAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALI 138
RA+++F +M C PD VT TV+ A ++ VD A I
Sbjct: 367 RAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDA----------------------I 404
Query: 139 KMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKL--IYEEMKRNG 196
++ G+L++ C P L TYN+++ + A+K L+ K +Y +M G
Sbjct: 405 ELLGLLKN--TC-----------CPPGLITYNSVIDGL--AKKGLMKKALELYHQMLDAG 449
Query: 197 ISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAV 256
I PD IT +L+ + L E+A + +E G+ L++ ++ A+
Sbjct: 450 IFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAI 509
Query: 257 EIFEDIKSSGIYQPDESTFSSLI 279
E+ E I +G +PDE+ +++++
Sbjct: 510 EVVE-IMLTGGCKPDETIYTAIV 531
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 13/187 (6%)
Query: 135 SALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKR 194
S L++ ++ D+ + + M + G P+ TYN ++ + + A ++ E+M
Sbjct: 143 SNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSL 202
Query: 195 NGISPDYITYSTLLRAYIGGYLREDALGIYREMKEN-----RIGVTVDLCNLLLSMCADV 249
+G PD ITY+T++R E A+ +++ +N I TV L L+ C
Sbjct: 203 SGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTV-LVELVCRYCGSA 261
Query: 250 GFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSC-FAKVSEAEAMLNEMIESGFKPNIF 308
A+E+ ED+ G Y PD T++SL+ Y+C + E +++ ++ G + N
Sbjct: 262 ----RAIEVLEDMAVEGCY-PDIVTYNSLVN-YNCRRGNLEEVASVIQHILSHGLELNTV 315
Query: 309 VITPLVK 315
L+
Sbjct: 316 TYNTLLH 322
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 77/185 (41%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
++ YN+ + K + A F +ML++K PD VT+ T++ M D A+E
Sbjct: 349 VITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLG 408
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
+ C P +T +VI A+ + A LY + D +T +LI +
Sbjct: 409 LLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRAN 468
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
++ V + G TY ++ + + ++ +A + E M G PD Y+
Sbjct: 469 LVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYT 528
Query: 206 TLLRA 210
+++
Sbjct: 529 AIVKG 533
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 154/325 (47%), Gaps = 40/325 (12%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++V+ + + ++ K FE + ++FDEM +R D ++ T+I+C +++A+E F
Sbjct: 141 DVVVASSLVGMYAKFNLFENSLQVFDEMPER----DVASWNTVISCFYQSGEAEKALELF 196
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG-- 142
+M G EP++V+ I A +R+ ++ + ++ + + + LD SAL+ MYG
Sbjct: 197 GRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKC 256
Query: 143 -----------------------MLEDY------DQCLNVYDDMKVLGVKPNLGTYNTLL 173
M++ Y C+ + + M + G +P+ T ++L
Sbjct: 257 DCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSIL 316
Query: 174 PAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIG 233
A R+R L K I+ + R+ ++ D +L+ Y A ++ + +++
Sbjct: 317 MACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKD--- 373
Query: 234 VTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEA 293
+ N+++S VG +AVE+++ + S G+ +PD TF+S++ S A + + +
Sbjct: 374 -VAESWNVMISSYISVGNWFKAVEVYDQMVSVGV-KPDVVTFTSVLPACSQLAALEKGKQ 431
Query: 294 MLNEMIESGFKPNIFVITPLVKCYG 318
+ + ES + + +++ L+ Y
Sbjct: 432 IHLSISESRLETDELLLSALLDMYS 456
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/292 (19%), Positives = 128/292 (43%), Gaps = 13/292 (4%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEW 83
+++VL + V+ CKD A +F+ ++ D + ++++ SM +E
Sbjct: 37 RDVVLCKSLINVYFTCKDHCSARHVFENF---DIRSDVYIWNSLMSGYSKNSMFHDTLEV 93
Query: 84 FEKMPGFG-CEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG 142
F+++ C PD+ T VI AY + + ++ + D V S+L+ MY
Sbjct: 94 FKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYA 153
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
++ L V+D+M + ++ ++NT++ Y++ + A ++ M+ +G P+ +
Sbjct: 154 KFNLFENSLQVFDEMP----ERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSV 209
Query: 203 TYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDI 262
+ + + A E I+R+ + + + + L+ M L+ A E+F+ +
Sbjct: 210 SLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKM 269
Query: 263 KSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
+ ++S+I Y +LN MI G +P+ +T ++
Sbjct: 270 PRKSLV-----AWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSIL 316
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 136/335 (40%), Gaps = 19/335 (5%)
Query: 35 VFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEP 94
++ KC E A ++F +M ++ L V + +MI S VE +M G P
Sbjct: 252 MYGKCDCLEVAREVFQKMPRKSL----VAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRP 307
Query: 95 DAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVY 154
T +++ A +R N+ + ++ D +LI +Y + + V+
Sbjct: 308 SQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVF 367
Query: 155 DDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGG 214
+ K ++N ++ + A +Y++M G+ PD +T++++L A
Sbjct: 368 SKTQ----KDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQL 423
Query: 215 YLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDEST 274
E I+ + E+R+ L + LL M + G EA IF I + D +
Sbjct: 424 AALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP-----KKDVVS 478
Query: 275 FSSLITVYSCFAKVSEAEAMLNEMIESGFKPN-IFVITPLVKCYGXXXXXXXXXXXXXRG 333
++ +I+ Y + EA +EM + G KP+ + ++ L C
Sbjct: 479 WTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMR 538
Query: 334 LDWGIVPDGHCCCCLLNIMTKTPMEELGKLIDCIE 368
+GI P C+++I+ + G+L++ E
Sbjct: 539 SKYGIEPIIEHYSCMIDILGRA-----GRLLEAYE 568
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 111/231 (48%), Gaps = 11/231 (4%)
Query: 33 MKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGC 92
+ ++ KC + AE +F + + + NV ++ I+ +AVE +++M G
Sbjct: 351 IDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWF----KAVEVYDQMVSVGV 406
Query: 93 EPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLN 152
+PD VT +V+ A +++ ++ ++++ D + SAL+ MY + +
Sbjct: 407 KPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFR 466
Query: 153 VYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYI 212
+++ + K ++ ++ ++ A +P A ++EM++ G+ PD +T +L A
Sbjct: 467 IFNSIP----KKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACG 522
Query: 213 GGYLREDALGIYREMKENRIGV--TVDLCNLLLSMCADVGFLDEAVEIFED 261
L ++ L + +M+ ++ G+ ++ + ++ + G L EA EI +
Sbjct: 523 HAGLIDEGLKFFSQMR-SKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQ 572
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 135/333 (40%), Gaps = 55/333 (16%)
Query: 11 LRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFAT-MIN 69
L R+ + K LV +N +K + D + ++ + M+ +P T + ++
Sbjct: 259 LEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMA 318
Query: 70 CARLCSMSDRAVEWFEKMPGFG----CEPDAVTCATVIFAYARVENVDMAERLYDRAK-- 123
C+R R + + + G+ D ++I Y + ++AE ++ + +
Sbjct: 319 CSR-----SRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKD 373
Query: 124 -TENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKP 182
E+W + +I Y + ++ + + VYD M +GVKP++ T+ ++LPA +
Sbjct: 374 VAESWNV-------MISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAAL 426
Query: 183 LLAKLIYEEMKRNGISPDYITYSTLLRAY---------------------------IGGY 215
K I+ + + + D + S LL Y I Y
Sbjct: 427 EKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAY 486
Query: 216 LRE----DALGIYREMKENRIGVTVDLCNLL--LSMCADVGFLDEAVEIFEDIKSSGIYQ 269
+AL + EM+ + G+ D LL LS C G +DE ++ F ++S +
Sbjct: 487 GSHGQPREALYQFDEMQ--KFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIE 544
Query: 270 PDESTFSSLITVYSCFAKVSEAEAMLNEMIESG 302
P +S +I + ++ EA ++ + E+
Sbjct: 545 PIIEHYSCMIDILGRAGRLLEAYEIIQQTPETS 577
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 121/259 (46%), Gaps = 13/259 (5%)
Query: 65 ATMINCARLCSMSDRAVEWF----EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYD 120
+ +++ R C+ S +++ +++ G D V C ++I Y ++ A +++
Sbjct: 4 SKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFE 63
Query: 121 RAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGV-KPNLGTYNTLLPAVYRA 179
+ R D +++L+ Y + L V+ + + P+ T+ ++ A
Sbjct: 64 NF---DIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGAL 120
Query: 180 RKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLC 239
+ L ++I+ + ++G D + S+L+ Y L E++L ++ EM E +
Sbjct: 121 GREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASW---- 176
Query: 240 NLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMI 299
N ++S G ++A+E+F ++SSG ++P+ + + I+ S + + + + +
Sbjct: 177 NTVISCFYQSGEAEKALELFGRMESSG-FEPNSVSLTVAISACSRLLWLERGKEIHRKCV 235
Query: 300 ESGFKPNIFVITPLVKCYG 318
+ GF+ + +V + LV YG
Sbjct: 236 KKGFELDEYVNSALVDMYG 254
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 136/314 (43%), Gaps = 40/314 (12%)
Query: 38 KCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSD--RAVEWFEKMPGFGCE-- 93
K + F A +LF++M+ ++PD + +I LC + D RA E M GC+
Sbjct: 204 KFRHFGLAMELFNDMVSVGIRPDVYIYTGVIR--SLCELKDLSRAKEMIAHMEATGCDVN 261
Query: 94 ---------------------------------PDAVTCATVIFAYARVENVDMAERLYD 120
PD VT T+++ +V+ ++ + D
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMD 321
Query: 121 RAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRAR 180
+ S+L++ ++ LN+ + GV PNL YN L+ ++ + R
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381
Query: 181 KPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCN 240
K A+L+++ M + G+ P+ +TYS L+ + + AL EM + + ++V N
Sbjct: 382 KFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYN 441
Query: 241 LLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIE 300
L++ G + A ++ + + +P T++SL+ Y K+++A + +EM
Sbjct: 442 SLINGHCKFGDISAAEGFMAEMINKKL-EPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 500
Query: 301 SGFKPNIFVITPLV 314
G P+I+ T L+
Sbjct: 501 KGIAPSIYTFTTLL 514
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 136/298 (45%), Gaps = 18/298 (6%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMIN--CARLCSMSDRAVEW 83
L +YN + K + F AE LFD M + L+P++VT++ +I+ C R D A+ +
Sbjct: 367 LFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRR--GKLDTALSF 424
Query: 84 FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGM 143
+M G + ++I + + ++ AE + VT+++L+ Y
Sbjct: 425 LGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCS 484
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYIT 203
++ L +Y +M G+ P++ T+ TLL ++RA A ++ EM + P+ +T
Sbjct: 485 KGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVT 544
Query: 204 YSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCN---LLLSMCADVGFLDEAVEIFE 260
Y+ ++ Y A +EM E G+ D + L+ +C G EA ++F
Sbjct: 545 YNVMIEGYCEEGDMSKAFEFLKEMTEK--GIVPDTYSYRPLIHGLCL-TGQASEA-KVFV 600
Query: 261 DIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
D G + +E ++ L+ + K+ EA ++ EM++ G ++ CYG
Sbjct: 601 DGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV-------CYG 651
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 162/390 (41%), Gaps = 13/390 (3%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMS--DRAVEWFEK 86
YN + K D AE EM+ +KL+P VT+ +++ CS ++A+ + +
Sbjct: 440 YNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLM--GGYCSKGKINKALRLYHE 497
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED 146
M G G P T T++ R + A +L++ N + + VT++ +I+ Y D
Sbjct: 498 MTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGD 557
Query: 147 YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYST 206
+ +M G+ P+ +Y L+ + + AK+ + + + + I Y+
Sbjct: 558 MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617
Query: 207 LLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAV--EIFEDIKS 264
LL + E+AL + +EM + GV +DL + + + D + + +++
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQR--GVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHD 675
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXX 324
G+ +PD+ ++S+I S EA + + MI G PN T ++
Sbjct: 676 RGL-KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734
Query: 325 XXXXXXXRGLDWGIVPDGHCCCCLLNIMTK--TPMEELGKLIDCIEKANEELGSVVRYLV 382
+ VP+ C L+I+TK M++ +L + I K + L+
Sbjct: 735 EAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLI 794
Query: 383 EGQEEGDQDFIKETSALLNSTDAEIKKPLC 412
G Q I+E S L+ + P C
Sbjct: 795 RGFCR--QGRIEEASELITRMIGDGVSPDC 822
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 121/283 (42%), Gaps = 38/283 (13%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+LV Y V + K KD + L EM R LKPD+V + +MI+ A +
Sbjct: 646 DLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
+ M GC P+ VT VI + V+ AE L + + + + VT+ + +
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKG 765
Query: 145 E-DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYIT 203
E D + + +++ + + G+ N TYN L+ R + A + M +G+SPD IT
Sbjct: 766 EVDMQKAVELHNAI-LKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCIT 824
Query: 204 YSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIK 263
Y+T++ +LC DV +A+E++ +
Sbjct: 825 YTTMIN---------------------------ELCRR-----NDV---KKAIELWNSMT 849
Query: 264 SSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
GI +PD +++LI ++ +A + NEM+ G PN
Sbjct: 850 EKGI-RPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/333 (19%), Positives = 131/333 (39%), Gaps = 42/333 (12%)
Query: 18 IKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMS 77
+KP R V YNV ++ + + D A + EM ++ + PD ++ +I+ L +
Sbjct: 538 VKPNR----VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQA 593
Query: 78 DRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSAL 137
A + + + CE + + ++ + R ++ A + LD V + L
Sbjct: 594 SEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVL 653
Query: 138 IK----------MYGMLE-------------------------DYDQCLNVYDDMKVLGV 162
I +G+L+ D+ + ++D M G
Sbjct: 654 IDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGC 713
Query: 163 KPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYL-REDAL 221
PN TY ++ + +A A+++ +M+ P+ +TY L G + + A+
Sbjct: 714 VPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAV 773
Query: 222 GIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITV 281
++ + + + T L+ C G ++EA E+ + G+ PD T++++I
Sbjct: 774 ELHNAILKGLLANTATYNMLIRGFCRQ-GRIEEASELITRMIGDGV-SPDCITYTTMINE 831
Query: 282 YSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
V +A + N M E G +P+ L+
Sbjct: 832 LCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLI 864
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 119/295 (40%), Gaps = 27/295 (9%)
Query: 28 LYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNV-----TFATMINCARLCSMSDRAVE 82
++NV ++KCK + FD ++Q ++ V F MI L
Sbjct: 140 VFNVLFSCYEKCK--LSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLL-------- 189
Query: 83 WFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG 142
P+ T + ++ + + +A L++ + R D ++ +I+
Sbjct: 190 -----------PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLC 238
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
L+D + + M+ G N+ YN L+ + + +K A I +++ + PD +
Sbjct: 239 ELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVV 298
Query: 203 TYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDI 262
TY TL+ E L + EM R + + L+ G ++EA+ + + +
Sbjct: 299 TYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRV 358
Query: 263 KSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
G+ P+ +++LI K EAE + + M + G +PN + L+ +
Sbjct: 359 VDFGV-SPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMF 412
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 122/276 (44%), Gaps = 1/276 (0%)
Query: 39 CKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVT 98
C F+ A LF EMLQ + P V F ++ + D + + KM G D +
Sbjct: 57 CIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYS 116
Query: 99 CATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMK 158
+I + R + +A L + +R VT +L+ + + + +++ D M
Sbjct: 117 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 176
Query: 159 VLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLRE 218
G PN+ YNT++ + + R A ++ M++ GI D +TY+TL+
Sbjct: 177 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236
Query: 219 DALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSL 278
DA + R+M + +I V L+ G L EA +++++ + P+ T++SL
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV-PNVFTYNSL 295
Query: 279 ITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
I + + +A+ M + M+ G P++ L+
Sbjct: 296 INGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLI 331
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 163/387 (42%), Gaps = 3/387 (0%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+V + + V K F+ L+ +M + D +F +I+C CS A+
Sbjct: 78 SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 137
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
KM G P VT +++ + + A L D + + V ++ +I
Sbjct: 138 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 197
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
D + L V+ M+ G++ + TYNTL+ + + + A + +M + I P+ I +
Sbjct: 198 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 257
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
+ L+ ++ +A +Y+EM + V N L++ G L +A +F+ + S
Sbjct: 258 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 317
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXX 324
G + PD T+++LIT + +V + + EM G + F L+ Y
Sbjct: 318 KGCF-PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376
Query: 325 XXXXXXXRGLDWGIVPDGHCCCCLLNIMTKT-PMEELGKLIDCIEKANEELGSVVRYLVE 383
R +D G+ PD LL+ + +E+ +++ ++K+ ++ ++ Y +
Sbjct: 377 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDV-DIITYNII 435
Query: 384 GQEEGDQDFIKETSALLNSTDAEIKKP 410
Q D +KE L S + KP
Sbjct: 436 IQGLCRTDKLKEAWCLFRSLTRKGVKP 462
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 129/308 (41%), Gaps = 40/308 (12%)
Query: 1 MENSETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPD 60
+ NS R LRD +K ++ + + F K + A L+ EM++R + P+
Sbjct: 229 LSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPN 288
Query: 61 NVTFATMIN--CARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERL 118
T+ ++IN C C + D A F+ M GC PD VT T+I + + + V+ +L
Sbjct: 289 VFTYNSLINGFCIHGC-LGD-AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 346
Query: 119 YDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYR 178
+ + D T++ LI Y + V++ M GV P++ TYN LL +
Sbjct: 347 FCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN 406
Query: 179 ARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDL 238
K A ++ E+++++ + D ITY+ + I G R D
Sbjct: 407 NGKIEKALVMVEDLQKSEMDVDIITYNII----IQGLCRTDK------------------ 444
Query: 239 CNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEM 298
L EA +F + G+ +PD + ++I+ EA+ + M
Sbjct: 445 -------------LKEAWCLFRSLTRKGV-KPDAIAYITMISGLCRKGLQREADKLCRRM 490
Query: 299 IESGFKPN 306
E GF P+
Sbjct: 491 KEDGFMPS 498
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 79/187 (42%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++V YN + F K K E KLF EM + L D T+ T+I+ + A + F
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
+M G PD VT ++ ++ A + + + +D +T++ +I+
Sbjct: 383 NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 442
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
+ + ++ + GVKP+ Y T++ + R A + MK +G P Y
Sbjct: 443 DKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Query: 205 STLLRAY 211
LR +
Sbjct: 503 DETLRDH 509
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 123/276 (44%), Gaps = 7/276 (2%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDR--AVEWFEK 86
Y + K D E A L +M + +K V + +I+ RLC A F +
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIID--RLCKDGHHIHAQNLFTE 101
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED 146
M G PD +T + +I ++ R AE+L D VTFSALI
Sbjct: 102 MHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGK 161
Query: 147 YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYST 206
+ +Y DM G+ P TYN+++ + + AK + + M SPD +T+ST
Sbjct: 162 VSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFST 221
Query: 207 LLRAYIGGYLREDALGIYREM-KENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSS 265
L+ Y ++ + I+ EM + + TV L+ C VG LD A ++ + SS
Sbjct: 222 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC-QVGDLDAAQDLLNVMISS 280
Query: 266 GIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIES 301
G+ P+ TF S++ ++ +A A+L ++ +S
Sbjct: 281 GV-APNYITFQSMLASLCSKKELRKAFAILEDLQKS 315
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 102/206 (49%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+++ Y+ + F + + AE+L +M++R++ PD VTF+ +IN A E +
Sbjct: 110 DVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIY 169
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
M G P +T ++I + + + ++ A+R+ D +++ D VTFS LI Y
Sbjct: 170 GDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKA 229
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
+ D + ++ +M G+ N TY TL+ + A+ + M +G++P+YIT+
Sbjct: 230 KRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITF 289
Query: 205 STLLRAYIGGYLREDALGIYREMKEN 230
++L + A I +++++
Sbjct: 290 QSMLASLCSKKELRKAFAILEDLQKS 315
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 102/261 (39%), Gaps = 38/261 (14%)
Query: 91 GCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQC 150
GC PD VT T++ V A L DR E + + L KM D +
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKM----GDTESA 60
Query: 151 LNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRA 210
LN+ M+ +K ++ YN ++ + + + A+ ++ EM GI PD ITYS ++ +
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 211 YIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIY-- 268
+ DA + R+M E +I V + L++ G + EA EI+ D+ GI+
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180
Query: 269 --------------------------------QPDESTFSSLITVYSCFAKVSEAEAMLN 296
PD TFS+LI Y +V +
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFC 240
Query: 297 EMIESGFKPNIFVITPLVKCY 317
EM G N T L+ +
Sbjct: 241 EMHRRGIVANTVTYTTLIHGF 261
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 89/184 (48%)
Query: 12 RYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCA 71
+ LRD I+ ++V ++ + K AE+++ +ML+R + P +T+ +MI+
Sbjct: 132 QLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGF 191
Query: 72 RLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDT 131
+ A + M C PD VT +T+I Y + + VD ++ +T
Sbjct: 192 CKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 251
Query: 132 VTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEE 191
VT++ LI + + D D ++ + M GV PN T+ ++L ++ ++ A I E+
Sbjct: 252 VTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILED 311
Query: 192 MKRN 195
++++
Sbjct: 312 LQKS 315
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 111/241 (46%), Gaps = 3/241 (1%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGF-GCEPDAVTCATVI 103
A+KLFDEML+ L+P + ++ ++ D A +KM F C+PD T +T++
Sbjct: 143 AQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLL 202
Query: 104 FAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKV-LGV 162
A D+ + LY +TVT + ++ YG + +DQ V DM V
Sbjct: 203 KACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTAC 262
Query: 163 KPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALG 222
KP++ T N +L K + + YE+ + GI P+ T++ L+ +Y + +
Sbjct: 263 KPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSS 322
Query: 223 IYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVY 282
+ M++ T N ++ ADVG F+ ++S G+ + D TF LI Y
Sbjct: 323 VMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGM-KADTKTFCCLINGY 381
Query: 283 S 283
+
Sbjct: 382 A 382
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 111/270 (41%), Gaps = 4/270 (1%)
Query: 16 DKIK--PTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARL 73
DK+K P ++ Y+ +K F+ + L+ EM +R + P+ VT +++
Sbjct: 183 DKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGR 242
Query: 74 CSMSDRAVEWFEKM-PGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTV 132
D+ + M C+PD T ++ + + +DM E Y++ + +T
Sbjct: 243 VGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETR 302
Query: 133 TFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEM 192
TF+ LI YG YD+ +V + M+ L TYN ++ A +L +++M
Sbjct: 303 TFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQM 362
Query: 193 KRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFL 252
+ G+ D T+ L+ Y L + + + I N ++S CA L
Sbjct: 363 RSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDL 422
Query: 253 DEAVEIFEDIKSSGIYQPDESTFSSLITVY 282
E ++ +K D TF ++ Y
Sbjct: 423 IEMERVYIRMKERQCV-CDSRTFEIMVEAY 451
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 1/187 (0%)
Query: 133 TFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEM 192
T+ L+ + G ++ ++D+M G++P + Y LL A R+ A I ++M
Sbjct: 126 TYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKM 185
Query: 193 KR-NGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGF 251
K PD TYSTLL+A + + +Y+EM E I N++LS VG
Sbjct: 186 KSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGR 245
Query: 252 LDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVIT 311
D+ ++ D+ S +PD T + +++V+ K+ E+ + G +P
Sbjct: 246 FDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFN 305
Query: 312 PLVKCYG 318
L+ YG
Sbjct: 306 ILIGSYG 312
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 114/250 (45%), Gaps = 11/250 (4%)
Query: 113 DMAERLYDRAKTENWRLDTVT--FSALIKMYGMLEDYDQCLNVYDDMKVLGV-KPNLGTY 169
++ ++L R+K W ++TVT S LI L Q L V+D ++ +P GTY
Sbjct: 73 NVKKKLDRRSKANGW-VNTVTETLSDLIAKKQWL----QALEVFDMLREQTFYQPKEGTY 127
Query: 170 NTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKE 229
LL + ++ +P A+ +++EM G+ P Y+ LL AY L +DA I +MK
Sbjct: 128 MKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKS 187
Query: 230 -NRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKV 288
+ V + LL C D D +++++ I P+ T + +++ Y +
Sbjct: 188 FPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLI-TPNTVTQNIVLSGYGRVGRF 246
Query: 289 SEAEAMLNEM-IESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCC 347
+ E +L++M + + KP+++ + ++ +G + ++GI P+
Sbjct: 247 DQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNI 306
Query: 348 LLNIMTKTPM 357
L+ K M
Sbjct: 307 LIGSYGKKRM 316
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 144/334 (43%), Gaps = 40/334 (11%)
Query: 20 PTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDR 79
P + LYN+ ++ K + E L+ +M+ + P TF +I S D
Sbjct: 106 PENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDA 165
Query: 80 AVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIK 139
A E F++MP GC+P+ T ++ Y + D L + ++ + V ++ ++
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225
Query: 140 MYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRN---G 196
+ D + + M+ G+ P++ T+N+ + A+ + K L A I+ +M+ + G
Sbjct: 226 SFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLG 285
Query: 197 I-SPDYITYSTLLRAYIGGYLREDALGIYREMKENR------------------------ 231
+ P+ ITY+ +L+ + L EDA ++ ++EN
Sbjct: 286 LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEA 345
Query: 232 -----------IGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLIT 280
IG ++ N+L+ +G L +A I +K +G+ PD T+ L+
Sbjct: 346 ETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVC-PDAVTYGCLLH 404
Query: 281 VYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
Y KV A+++L EM+ + PN + L+
Sbjct: 405 GYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILL 438
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 146/337 (43%), Gaps = 33/337 (9%)
Query: 7 APVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFAT 66
A VL+ + DK G + YN+ M K A+ + M + + PD VT+
Sbjct: 345 AETVLKQMTDK---GIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGC 401
Query: 67 MINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTEN 126
+++ D A ++M C P+A TC ++ + ++ + AE L + +
Sbjct: 402 LLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKG 461
Query: 127 WRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVK----------------------- 163
+ LDTVT + ++ + D+ + + M+V G
Sbjct: 462 YGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCL 521
Query: 164 PNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGI 223
P+L TY+TLL + +A + AK ++ EM + PD + Y+ + + A +
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 224 YREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEI---FEDIKSSGIYQPDESTFSSLIT 280
++M++ +++ N S+ +G ++ EI +++K GI P+ T+++ I
Sbjct: 582 LKDMEKKGCHKSLETYN---SLILGLGIKNQIFEIHGLMDEMKEKGI-SPNICTYNTAIQ 637
Query: 281 VYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
KV +A +L+EM++ PN+F L++ +
Sbjct: 638 YLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAF 674
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 121/312 (38%), Gaps = 74/312 (23%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
+N+ ++ + A +LFDEM ++ KP+ TF ++ ++D+ +E M
Sbjct: 150 FNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAME 209
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENW--------------------- 127
FG P+ V T++ ++ R D +E++ ++ + E
Sbjct: 210 SFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVL 269
Query: 128 ------------------RLDTVTFSALIKMY---GMLEDYD---QCLNVYDDMKVL--- 160
R +++T++ ++K + G+LED + + DD+ L
Sbjct: 270 DASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSY 329
Query: 161 --------------------------GVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKR 194
G+ P++ +YN L+ + + AK I MKR
Sbjct: 330 NIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR 389
Query: 195 NGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDE 254
NG+ PD +TY LL Y + A + +EM N CN+LL +G + E
Sbjct: 390 NGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISE 449
Query: 255 AVEIFEDIKSSG 266
A E+ + G
Sbjct: 450 AEELLRKMNEKG 461
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 120/272 (44%), Gaps = 8/272 (2%)
Query: 50 DEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARV 109
D +++ PD +T++T++N A F +M G +PD+V I + +
Sbjct: 513 DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQ 572
Query: 110 ENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTY 169
+ A R+ + + T+++LI G+ + + D+MK G+ PN+ TY
Sbjct: 573 GKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTY 632
Query: 170 NTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKE 229
NT + + K A + +EM + I+P+ ++ L+ A+ + + +E+ E
Sbjct: 633 NTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFC----KVPDFDMAQEVFE 688
Query: 230 NRI---GVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFA 286
+ G L +L+ + G L +A E+ E + G ++ + L+
Sbjct: 689 TAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRG-FELGTFLYKDLVESLCKKD 747
Query: 287 KVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
++ A +L++MI+ G+ + + P++ G
Sbjct: 748 ELEVASGILHKMIDRGYGFDPAALMPVIDGLG 779
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 157/348 (45%), Gaps = 24/348 (6%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
+ L NV + ++ K A +LFD+M QR + +++ TMI+ C + +A+E
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNV----ISWTTMISAYSKCKIHQKALELLV 151
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
M P+ T ++V+ + + +V M L+ E D SALI ++ L
Sbjct: 152 LMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLG 208
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
+ + L+V+D+M V + +N+++ + + +A +++ MKR G + T +
Sbjct: 209 EPEDALSVFDEM----VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLT 264
Query: 206 TLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSS 265
++LRA G L E LG+ + + + L N L+ M G L++A+ +F +K
Sbjct: 265 SVLRACTGLALLE--LGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMK-- 320
Query: 266 GIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN-IFVITPLVKCYGXXXXXX 324
+ D T+S++I+ + EA + M SG KPN I ++ L C
Sbjct: 321 ---ERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLED 377
Query: 325 XXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPMEELGKLIDCIEKANE 372
+GI P C+++++ K GKL D ++ NE
Sbjct: 378 GWYYFRSMKKLYGIDPVREHYGCMIDLLGKA-----GKLDDAVKLLNE 420
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 126/266 (47%), Gaps = 21/266 (7%)
Query: 18 IKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMS 77
IK ++ + + + VF K + E A +FDEM + D + + ++I S S
Sbjct: 186 IKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM----VTGDAIVWNSIIGGFAQNSRS 241
Query: 78 DRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSAL 137
D A+E F++M G + T +V+ A + +++ + + + D + +AL
Sbjct: 242 DVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAH--VHIVKYDQDLILNNAL 299
Query: 138 IKMY---GMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKR 194
+ MY G LED L V++ MK + ++ T++T++ + + A ++E MK
Sbjct: 300 VDMYCKCGSLED---ALRVFNQMK----ERDVITWSTMISGLAQNGYSQEALKLFERMKS 352
Query: 195 NGISPDYITYSTLLRAYIGGYLREDALGIYREMKE-NRIGVTVDLCNLLLSMCADVGFLD 253
+G P+YIT +L A L ED +R MK+ I + ++ + G LD
Sbjct: 353 SGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLD 412
Query: 254 EAVEIFEDIKSSGIYQPDESTFSSLI 279
+AV++ +++ +PD T+ +L+
Sbjct: 413 DAVKLLNEMEC----EPDAVTWRTLL 434
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 95/191 (49%), Gaps = 13/191 (6%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEW 83
++L+L N + ++ KC E A ++F++M +R D +T++TMI+ S A++
Sbjct: 291 QDLILNNALVDMYCKCGSLEDALRVFNQMKER----DVITWSTMISGLAQNGYSQEALKL 346
Query: 84 FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTV--TFSALIKMY 141
FE+M G +P+ +T V+FA + ++ Y R+ + + +D V + +I +
Sbjct: 347 FERMKSSGTKPNYITIVGVLFACSHAGLLEDGW-YYFRSMKKLYGIDPVREHYGCMIDLL 405
Query: 142 GMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISP-D 200
G D + + ++M+ +P+ T+ TLL A R +LA+ Y K + P D
Sbjct: 406 GKAGKLDDAVKLLNEME---CEPDAVTWRTLLGACRVQRNMVLAE--YAAKKVIALDPED 460
Query: 201 YITYSTLLRAY 211
TY+ L Y
Sbjct: 461 AGTYTLLSNIY 471
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 144/325 (44%), Gaps = 43/325 (13%)
Query: 28 LYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKM 87
L NV + + KC A KLF+ M + + +++ T+++ + ++ A+E F M
Sbjct: 286 LMNVLIDSYVKCGRVIAAHKLFNGMPNKNI----ISWTTLLSGYKQNALHKEAMELFTSM 341
Query: 88 PGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMY------ 141
FG +PD C++++ + A + + +++ N D+ ++LI MY
Sbjct: 342 SKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCL 401
Query: 142 -------------------GMLEDYD---------QCLNVYDDMKVLGVKPNLGTYNTLL 173
M+E Y + LN++ DM+ ++P+L T+ +LL
Sbjct: 402 TDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLL 461
Query: 174 PAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIG 233
A L+K I+ M + G++ D S L+ Y Y +D+ ++ EMK +
Sbjct: 462 RASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLV 521
Query: 234 VTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEA 293
+ N + + +EA+ +F +++ S +PDE TF++++T A V +
Sbjct: 522 I----WNSMFAGYVQQSENEEALNLFLELQLSR-ERPDEFTFANMVTAAGNLASVQLGQE 576
Query: 294 MLNEMIESGFKPNIFVITPLVKCYG 318
++++ G + N ++ L+ Y
Sbjct: 577 FHCQLLKRGLECNPYITNALLDMYA 601
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 158/373 (42%), Gaps = 23/373 (6%)
Query: 18 IKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMI-NCARLCSM 76
IK G + + N + ++ KC A K+FD D V F MI +RL +
Sbjct: 377 IKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIF----AAADVVLFNAMIEGYSRLGTQ 432
Query: 77 SD--RAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTF 134
+ A+ F M P +T +++ A A + ++ ++++++ LD
Sbjct: 433 WELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAG 492
Query: 135 SALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKR 194
SALI +Y V+D+MKV +L +N++ + + A ++ E++
Sbjct: 493 SALIDVYSNCYCLKDSRLVFDEMKV----KDLVIWNSMFAGYVQQSENEEALNLFLELQL 548
Query: 195 NGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVD--LCNLLLSMCADVGFL 252
+ PD T++ ++ A G L LG + + G+ + + N LL M A G
Sbjct: 549 SRERPDEFTFANMVTA--AGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSP 606
Query: 253 DEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITP 312
++A + F+ S D ++S+I+ Y+ + +A ML +M+ G +PN
Sbjct: 607 EDAHKAFDSAASR-----DVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVG 661
Query: 313 LVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPMEELGKLIDCIEKANE 372
++ L +GI P+ C+++++ + L K + IEK
Sbjct: 662 VLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAG--RLNKARELIEKMPT 719
Query: 373 ELGSVV-RYLVEG 384
+ ++V R L+ G
Sbjct: 720 KPAAIVWRSLLSG 732
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/275 (19%), Positives = 120/275 (43%), Gaps = 14/275 (5%)
Query: 47 KLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAY 106
+LF ++++ + PD +T+++ + + + + +G E DA +I +Y
Sbjct: 235 QLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSY 294
Query: 107 ARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNL 166
+ V A +L++ +N ++++ L+ Y + + + ++ M G+KP++
Sbjct: 295 VKCGRVIAAHKLFNGMPNKN----IISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDM 350
Query: 167 GTYNTLLPAVYRARKPLLAKLIYE-EMKRNGISPDYITYSTLLRAYIGGYLREDALGIYR 225
+++L + ++ +K N + Y+T S I Y + D L R
Sbjct: 351 YACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSL-----IDMYAKCDCLTDAR 405
Query: 226 EMKENRIGVTVDLCNLLLSMCADVGF---LDEAVEIFEDIKSSGIYQPDESTFSSLITVY 282
++ + V L N ++ + +G L EA+ IF D++ I +P TF SL+
Sbjct: 406 KVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLI-RPSLLTFVSLLRAS 464
Query: 283 SCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ + ++ + M + G +IF + L+ Y
Sbjct: 465 ASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVY 499
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 131/275 (47%), Gaps = 2/275 (0%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIF 104
A +L +M + ++PD+VT+ + L M A E M G PD +T ++
Sbjct: 276 ALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLC 335
Query: 105 AYARVENVDMAERLYDRAKTENWRLDTVT-FSALIKMYGMLEDYDQCLNVYDDMKVLGVK 163
++ N+DM L + + L+++ S ++ D+ L++++ MK G+
Sbjct: 336 GQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLS 395
Query: 164 PNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGI 223
P+L Y+ ++ + + K +A +Y+EM I P+ T+ LL + +A +
Sbjct: 396 PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSL 455
Query: 224 YREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYS 283
+ + + + L N+++ A G ++EA+E+F+ + +GI P +TF+SLI Y
Sbjct: 456 LDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI-TPSVATFNSLIYGYC 514
Query: 284 CFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
++EA +L+ + G P++ T L+ Y
Sbjct: 515 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 549
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 126/307 (41%), Gaps = 17/307 (5%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCS--MSDRAVE 82
+LV Y++ + K F+ A L+DEM +++ P++ T ++ LC M A
Sbjct: 397 DLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL--LGLCQKGMLLEARS 454
Query: 83 WFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG 142
+ + G D V VI YA+ ++ A L+ TF++LI Y
Sbjct: 455 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC 514
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
++ + + D +K+ G+ P++ +Y TL+ A + EMK GI P +
Sbjct: 515 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 574
Query: 203 TYSTLLRAYIGGYLREDALGIYRE------------MKENRIGVTVDLCNLLLSMCADVG 250
TYS + + G+ E+ + RE M+ I N ++ V
Sbjct: 575 TYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVK 634
Query: 251 FLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVI 310
L A E +KS + +T++ LI + + +A++ + + E + F
Sbjct: 635 HLSGAFVFLEIMKSRNL-DASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAY 693
Query: 311 TPLVKCY 317
T L+K +
Sbjct: 694 TTLIKAH 700
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 107/222 (48%), Gaps = 8/222 (3%)
Query: 93 EPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLN 152
E + ++F +R+ VD + + + K +N + T ++++++ + + D+ +
Sbjct: 121 ESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF---RETDKMWD 177
Query: 153 VYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYI 212
VY ++K N TY+T++ + R +K A L + I P +++++++ Y
Sbjct: 178 VYKEIK----DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYC 233
Query: 213 GGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDE 272
+ A + + + + +V N+L++ VG + EA+E+ D+ G+ +PD
Sbjct: 234 KLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGV-EPDS 292
Query: 273 STFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
T++ L + +S A ++ +M++ G P++ T L+
Sbjct: 293 VTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILL 334
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 131/292 (44%), Gaps = 1/292 (0%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
+V+Y + K + E A+ LF EM + L + T+ +IN + + E +E
Sbjct: 198 VVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYE 257
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
KM G P+ T V+ + A +++D + + VT++ LI
Sbjct: 258 KMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREM 317
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
++ V D MK G+ PNL TYNTL+ K A + ++K G+SP +TY+
Sbjct: 318 KLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYN 377
Query: 206 TLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSS 265
L+ + A + +EM+E I + +L+ A +++A+++ ++
Sbjct: 378 ILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEEL 437
Query: 266 GIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
G+ PD T+S LI + +++EA + M+E +PN + ++ Y
Sbjct: 438 GLV-PDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGY 488
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 134/283 (47%), Gaps = 9/283 (3%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLC--SMSDRAVEWF 84
VL N K K + FE ++++M + + P+ T+ ++N +LC + A + F
Sbjct: 238 VLINGLFKNGVKKQGFE----MYEKMQEDGVFPNLYTYNCVMN--QLCKDGRTKDAFQVF 291
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
++M G + VT T+I R ++ A ++ D+ K++ + +T++ LI + +
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGV 351
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
+ L++ D+K G+ P+L TYN L+ R A + +EM+ GI P +TY
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
+ L+ + E A+ + M+E + V ++L+ G ++EA +F+ +
Sbjct: 412 TILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNI 307
+P+E ++++I Y A +L EM E PN+
Sbjct: 472 KNC-EPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNV 513
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 141/295 (47%), Gaps = 19/295 (6%)
Query: 26 LVLYNVAMKVFKKCKD--FEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMS--DRAV 81
L YN M + CKD + A ++FDEM +R + + VT+ T+I LC + A
Sbjct: 268 LYTYNCVMN--QLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLI--GGLCREMKLNEAN 323
Query: 82 EWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMY 141
+ ++M G P+ +T T+I + V + A L K+ VT++ L+ +
Sbjct: 324 KVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383
Query: 142 GMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRA---RKPLLAKLIYEEMKRNGIS 198
D + +M+ G+KP+ TY L+ R+ K + +L EE+ G+
Sbjct: 384 CRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEEL---GLV 440
Query: 199 PDYITYSTLLRAY-IGGYLREDALGIYREMKENRIGVTVDLCN-LLLSMCADVGFLDEAV 256
PD TYS L+ + I G + E A +++ M E + N ++L C + G A+
Sbjct: 441 PDVHTYSVLIHGFCIKGQMNE-ASRLFKSMVEKNCEPNEVIYNTMILGYCKE-GSSYRAL 498
Query: 257 EIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVIT 311
++ ++++ + P+ +++ +I V K EAE ++ +MI+SG P+ +++
Sbjct: 499 KLLKEMEEKEL-APNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILS 552
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 87/185 (47%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
LV YN+ + F + D GA K+ EM +R +KP VT+ +I+ ++A++
Sbjct: 373 LVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRL 432
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
M G PD T + +I + ++ A RL+ +N + V ++ +I Y
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
+ L + +M+ + PN+ +Y ++ + + RK A+ + E+M +GI P S
Sbjct: 493 SSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILS 552
Query: 206 TLLRA 210
+ RA
Sbjct: 553 LISRA 557
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 90/186 (48%), Gaps = 1/186 (0%)
Query: 129 LDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLI 188
LD +F LIK + ++ ++ ++ G PN+ Y TL+ + + AK +
Sbjct: 161 LDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDL 220
Query: 189 YEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCAD 248
+ EM + G+ + TY+ L+ +++ +Y +M+E+ + + N +++
Sbjct: 221 FFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCK 280
Query: 249 VGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIF 308
G +A ++F++++ G+ + T+++LI K++EA ++++M G PN+
Sbjct: 281 DGRTKDAFQVFDEMRERGV-SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLI 339
Query: 309 VITPLV 314
L+
Sbjct: 340 TYNTLI 345
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 92/214 (42%), Gaps = 12/214 (5%)
Query: 1 MENSETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPD 60
M+ +E VV + D I P L+ YN + F A L ++ R L P
Sbjct: 317 MKLNEANKVVDQMKSDGINPN----LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372
Query: 61 NVTFATMINCARLCSMSDR--AVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERL 118
VT+ ++ + C D A + ++M G +P VT +I +AR +N++ A +L
Sbjct: 373 LVTYNILV--SGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL 430
Query: 119 YDRAKTENWRL--DTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAV 176
R E L D T+S LI + + ++ ++ M +PN YNT++
Sbjct: 431 --RLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGY 488
Query: 177 YRARKPLLAKLIYEEMKRNGISPDYITYSTLLRA 210
+ A + +EM+ ++P+ +Y ++
Sbjct: 489 CKEGSSYRALKLLKEMEEKELAPNVASYRYMIEV 522
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 136/279 (48%), Gaps = 10/279 (3%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIF 104
A +L +M + ++PD+VT+ + L M A E M G PD +T ++
Sbjct: 276 ALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLC 335
Query: 105 AYARVENVDMAERLYDRAKTENWRLDTVT-FSALIKMYGMLEDYDQCLNVYDDMKVLGVK 163
++ N+DM L + + L+++ S ++ D+ L++++ MK G+
Sbjct: 336 GQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLS 395
Query: 164 PNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGI 223
P+L Y+ ++ + + K +A +Y+EM I P+ T+ LL G ++ L
Sbjct: 396 PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLL----GLCQKGMLLE 451
Query: 224 YREMKENRI--GVTVD--LCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLI 279
R + ++ I G T+D L N+++ A G ++EA+E+F+ + +GI P +TF+SLI
Sbjct: 452 ARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI-TPSVATFNSLI 510
Query: 280 TVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
Y ++EA +L+ + G P++ T L+ Y
Sbjct: 511 YGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 549
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 126/307 (41%), Gaps = 17/307 (5%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCS--MSDRAVE 82
+LV Y++ + K F+ A L+DEM +++ P++ T ++ LC M A
Sbjct: 397 DLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL--LGLCQKGMLLEARS 454
Query: 83 WFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG 142
+ + G D V VI YA+ ++ A L+ TF++LI Y
Sbjct: 455 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC 514
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
++ + + D +K+ G+ P++ +Y TL+ A + EMK GI P +
Sbjct: 515 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 574
Query: 203 TYSTLLRAYIGGYLREDALGIYRE------------MKENRIGVTVDLCNLLLSMCADVG 250
TYS + + G+ E+ + RE M+ I N ++ V
Sbjct: 575 TYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVK 634
Query: 251 FLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVI 310
L A E +KS + +T++ LI + + +A++ + + E + F
Sbjct: 635 HLSGAFVFLEIMKSRNL-DASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAY 693
Query: 311 TPLVKCY 317
T L+K +
Sbjct: 694 TTLIKAH 700
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 107/222 (48%), Gaps = 8/222 (3%)
Query: 93 EPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLN 152
E + ++F +R+ VD + + + K +N + T ++++++ + + D+ +
Sbjct: 121 ESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF---RETDKMWD 177
Query: 153 VYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYI 212
VY ++K N TY+T++ + R +K A L + I P +++++++ Y
Sbjct: 178 VYKEIK----DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYC 233
Query: 213 GGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDE 272
+ A + + + + +V N+L++ VG + EA+E+ D+ G+ +PD
Sbjct: 234 KLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGV-EPDS 292
Query: 273 STFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
T++ L + +S A ++ +M++ G P++ T L+
Sbjct: 293 VTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILL 334
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 122/264 (46%), Gaps = 13/264 (4%)
Query: 35 VFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEP 94
++ KC A KLFDE+ +R D V++ +MI+ + A++ F KM G EP
Sbjct: 176 MYAKCGQVGYARKLFDEITER----DTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEP 231
Query: 95 DAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVY 154
D T +++ A + + ++ L + A T+ L T S LI MYG D D V+
Sbjct: 232 DERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVF 291
Query: 155 DDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGG 214
+ M +K + + ++ + K A ++ EM++ G+SPD T ST+L A
Sbjct: 292 NQM----IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSV 347
Query: 215 YLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDEST 274
E I E + + + L+ M G ++EA+ +FE + +E+T
Sbjct: 348 GALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVK-----NEAT 402
Query: 275 FSSLITVYSCFAKVSEAEAMLNEM 298
++++IT Y+ EA + + M
Sbjct: 403 WNAMITAYAHQGHAKEALLLFDRM 426
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 124/281 (44%), Gaps = 15/281 (5%)
Query: 41 DFEGAEKLFDEMLQRKLKPDNVTFA-TMINCARLCSMS-DRAVEWFEKMPGFGCEPDAVT 98
D E A L+ M LKPD T+ I CA+L + R+V + G E D
Sbjct: 112 DHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVH--SSLFKVGLERDVHI 169
Query: 99 CATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMK 158
++I YA+ V A +L+D TE DTV+++++I Y ++++ M+
Sbjct: 170 NHSLIMMYAKCGQVGYARKLFDEI-TER---DTVSWNSMISGYSEAGYAKDAMDLFRKME 225
Query: 159 VLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLRE 218
G +P+ T ++L A +L+ E I S L+ Y +
Sbjct: 226 EEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLD 285
Query: 219 DALGIYREM-KENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSS 277
A ++ +M K++R+ T ++++ + G EA ++F +++ +G+ PD T S+
Sbjct: 286 SARRVFNQMIKKDRVAWTA-----MITVYSQNGKSSEAFKLFFEMEKTGV-SPDAGTLST 339
Query: 278 LITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
+++ + + + E + NI+V T LV YG
Sbjct: 340 VLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYG 380
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 118/265 (44%), Gaps = 16/265 (6%)
Query: 58 KPDNVTFATMI-NCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAE 116
+P++ +F MI + + A+ + +M G +PD T V A A++E + +
Sbjct: 93 EPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGR 152
Query: 117 RLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAV 176
++ D +LI MY ++D++ + + ++N+++
Sbjct: 153 SVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEI----TERDTVSWNSMISGY 208
Query: 177 YRARKPLLAKLIYEEMKRNGISPDYITYSTLLRA--YIGGYLREDALGIYREMK-ENRIG 233
A A ++ +M+ G PD T ++L A ++G LR L EM +IG
Sbjct: 209 SEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGD-LRTGRL--LEEMAITKKIG 265
Query: 234 VTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEA 293
++ L + L+SM G LD A +F + + D ++++ITVYS K SEA
Sbjct: 266 LSTFLGSKLISMYGKCGDLDSARRVFNQM-----IKKDRVAWTAMITVYSQNGKSSEAFK 320
Query: 294 MLNEMIESGFKPNIFVITPLVKCYG 318
+ EM ++G P+ ++ ++ G
Sbjct: 321 LFFEMEKTGVSPDAGTLSTVLSACG 345
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 110/239 (46%)
Query: 60 DNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLY 119
D F +I + +V+ F+KM G E + ++ R MA+R +
Sbjct: 184 DEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYF 243
Query: 120 DRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRA 179
++ +E T++ ++ + + + L ++DMK G+ P+ T+NT++ R
Sbjct: 244 NKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRF 303
Query: 180 RKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLC 239
+K A+ ++ EMK N I P ++Y+T+++ Y+ +D L I+ EM+ + I
Sbjct: 304 KKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTY 363
Query: 240 NLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEM 298
+ LL D G + EA I +++ + I D S F L+ S ++ A +L M
Sbjct: 364 STLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAM 422
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 89/171 (52%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
YN KV + + A++ F++M+ ++P T+ M+ L + A+ +FE M
Sbjct: 223 YNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMK 282
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
G PD T T+I + R + +D AE+L+ K V+++ +IK Y ++ D
Sbjct: 283 TRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVD 342
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISP 199
L ++++M+ G++PN TY+TLLP + A K + AK I + M I+P
Sbjct: 343 DGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAP 393
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 36/188 (19%)
Query: 130 DTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIY 189
D F LI+ YG + + ++ MK LGV+ + +YN+L + R + ++AK +
Sbjct: 184 DEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYF 243
Query: 190 EEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADV 249
+M G+ P TY+ +L + LS+
Sbjct: 244 NKMVSEGVEPTRHTYNLMLWGF------------------------------FLSLR--- 270
Query: 250 GFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFV 309
L+ A+ FED+K+ GI PD++TF+++I + F K+ EAE + EM + P++
Sbjct: 271 --LETALRFFEDMKTRGI-SPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVS 327
Query: 310 ITPLVKCY 317
T ++K Y
Sbjct: 328 YTTMIKGY 335
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Query: 38 KCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAV 97
+ ++ + A+ L +M+ + P N F +++ D A E + M G +PD
Sbjct: 384 RMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVY 443
Query: 98 TCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDM 157
T +I YA+ +D A+ + AK ++ +L VT+ ALI+ Y +E+YD+ L + ++M
Sbjct: 444 TYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEM 503
Query: 158 KVLGVKPNLGTYNTLLPAV-YRARKPLLAKLIYEEMKRNGISPDYITYSTLLRA 210
GV+PN YN L+ + +A A++++EEMK+ G+ + I+ L+RA
Sbjct: 504 DRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNAISQG-LIRA 556
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 133/286 (46%), Gaps = 6/286 (2%)
Query: 23 GKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRA-V 81
G + +NV ++ + K K E A ++ +M + ++PD VT+ T+ C + RA
Sbjct: 185 GPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAES 244
Query: 82 EWFEKMP-GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKM 140
E EKM +P+ TC V+ Y R V R R K + V F++LI
Sbjct: 245 EVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLING 304
Query: 141 YGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPD 200
+ + D D V MK VK ++ TY+T++ A A A +++EM + G+ PD
Sbjct: 305 FVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPD 364
Query: 201 YITYSTLLRAYIGGYLREDALGIYREM-KENRIGVTVDLCNLLLSMCADVGFLDEAVEIF 259
YS L + Y+ + A + + E+R V + ++ C++ G +D+A+ +F
Sbjct: 365 AHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVI-FTTVISGWCSN-GSMDDAMRVF 422
Query: 260 EDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKP 305
+ G+ P+ TF +L+ Y + +AE +L M G KP
Sbjct: 423 NKMCKFGV-SPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKP 467
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 103/202 (50%), Gaps = 3/202 (1%)
Query: 11 LRYLRDKIKPTRGK-ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMIN 69
LR++R ++K R + LV++N + F + D +G +++ M + +K D +T++T++N
Sbjct: 280 LRFVR-RMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMN 338
Query: 70 CARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRL 129
++A + F++M G +PDA + + Y R + AE L + E+ R
Sbjct: 339 AWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RP 397
Query: 130 DTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIY 189
+ V F+ +I + D + V++ M GV PN+ T+ TL+ ++P A+ +
Sbjct: 398 NVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVL 457
Query: 190 EEMKRNGISPDYITYSTLLRAY 211
+ M+ G+ P+ T+ L A+
Sbjct: 458 QMMRGCGVKPENSTFLLLAEAW 479
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 135/313 (43%), Gaps = 41/313 (13%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIF 104
A+ +F + + +P +++ T++ + ++ G + D++ VI
Sbjct: 64 AQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVIN 123
Query: 105 AYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLG--- 161
A++ N++ A + + K T T++ LIK YG+ ++ + D M G
Sbjct: 124 AFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVD 183
Query: 162 VKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYI--------- 212
V PN+ T+N L+ A + +K A + ++M+ G+ PD +TY+T+ Y+
Sbjct: 184 VGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAE 243
Query: 213 ------------------------GGYLRE----DALGIYREMKENRIGVTVDLCNLLLS 244
GGY RE D L R MKE R+ + + N L++
Sbjct: 244 SEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLIN 303
Query: 245 MCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFK 304
+V D E+ +K + + D T+S+++ +S + +A + EM+++G K
Sbjct: 304 GFVEVMDRDGIDEVLTLMKECNV-KADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVK 362
Query: 305 PNIFVITPLVKCY 317
P+ + L K Y
Sbjct: 363 PDAHAYSILAKGY 375
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 112/246 (45%), Gaps = 13/246 (5%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
Y++ ++ + + +D GA K+FDEML+R D + + +++ D + F++M
Sbjct: 211 YSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMG 270
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
G +PDA + A I AY +V A ++ DR K + + TF+ +IK E D
Sbjct: 271 NLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVD 330
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLP------AVYRARKPLLAKLIYEEMKRNGISPDYI 202
+ D+M G P+ TYN+++ V RA K L M R PD
Sbjct: 331 DAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLL------SRMDRTKCLPDRH 384
Query: 203 TYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLS-MCADVGFLDEAVEIFED 261
TY+ +L+ I + A I+ M E + TV +++ + G L+EA FE
Sbjct: 385 TYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEM 444
Query: 262 IKSSGI 267
+ GI
Sbjct: 445 MIDEGI 450
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 122/297 (41%), Gaps = 41/297 (13%)
Query: 47 KLFDEMLQRKLKPDNVTFATMINCARLCSMS--DRAVEWFEKMPGFGCEPDAVTCATVIF 104
+ F+ M++ +KP +++ LC + A E+F K GFG P A T + ++
Sbjct: 159 RAFNRMVEFGIKPCVDDLDQLLHS--LCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVR 216
Query: 105 AYARVENVDMAERLYDRAKTENWRLDTVTFSALIKM----------YGMLE--------- 145
+AR+ + A +++D N +D + ++AL+ Y M +
Sbjct: 217 GWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKP 276
Query: 146 ----------------DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIY 189
D V D MK + PN+ T+N ++ + + K A L+
Sbjct: 277 DAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLL 336
Query: 190 EEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADV 249
+EM + G +PD TY++++ + A + M + N++L + +
Sbjct: 337 DEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRI 396
Query: 250 GFLDEAVEIFEDIKSSGIYQPDESTFSSLIT-VYSCFAKVSEAEAMLNEMIESGFKP 305
G D A EI+E + Y P +T++ +I + K+ EA MI+ G P
Sbjct: 397 GRFDRATEIWEGMSERKFY-PTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPP 452
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 4/190 (2%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSD--RAVE 82
+L+ YN + K D +G K+F EM LKPD +FA I+ C D A +
Sbjct: 242 DLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHA--YCDAGDVHSAYK 299
Query: 83 WFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG 142
++M + P+ T +I + E VD A L D + DT T+++++ +
Sbjct: 300 VLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHC 359
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
+ ++ + M P+ TYN +L + R + A I+E M P
Sbjct: 360 DHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVA 419
Query: 203 TYSTLLRAYI 212
TY+ ++ +
Sbjct: 420 TYTVMIHGLV 429
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 115/303 (37%), Gaps = 11/303 (3%)
Query: 61 NVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYD 120
N+ + C L + R W ++P F ++ I ++ + + + L +
Sbjct: 69 NLVEQVLKRCKNLGFPAHRFFLWARRIPDFAHSLESYHILVEILGSSK-QFALLWDFLIE 127
Query: 121 RAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRAR 180
+ + + + F + + Y + ++ M G+KP + + LL ++ +
Sbjct: 128 AREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKK 187
Query: 181 KPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCN 240
A+ + + K GI P TYS L+R + A ++ EM E V + N
Sbjct: 188 HVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYN 247
Query: 241 LLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIE 300
LL G +D ++F+++ + G+ +PD +F+ I Y V A +L+ M
Sbjct: 248 ALLDALCKSGDVDGGYKMFQEMGNLGL-KPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKR 306
Query: 301 SGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDG---------HCCCCLLNI 351
PN++ ++K + G PD HC C +N
Sbjct: 307 YDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNR 366
Query: 352 MTK 354
TK
Sbjct: 367 ATK 369
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 117/247 (47%), Gaps = 5/247 (2%)
Query: 59 PDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERL 118
P +MI+ C + A F + GC+P AVT + ++ A AE +
Sbjct: 702 PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHI 761
Query: 119 YDRAKTENWRLDTVTFSALIKMYGMLEDYD-QCLN-VYDDMKVLGVKPNLGTYNTLLPAV 176
+N LDTV ++ LIK MLE QC + +Y+ M GV ++ TYNT++
Sbjct: 762 SRTCLEKNIELDTVGYNTLIK--AMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVY 819
Query: 177 YRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTV 236
R + A I+ +R+G+ D Y+ ++ Y G +AL ++ EM++ I
Sbjct: 820 GRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGT 879
Query: 237 DLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLN 296
N+++ +CA E E+ + ++ +G D ST+ +LI VY+ ++ +EAE +
Sbjct: 880 PSYNMMVKICATSRLHHEVDELLQAMERNG-RCTDLSTYLTLIQVYAESSQFAEAEKTIT 938
Query: 297 EMIESGF 303
+ E G
Sbjct: 939 LVKEKGI 945
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 153/402 (38%), Gaps = 45/402 (11%)
Query: 35 VFKKCKDFEGAEKLFDEM-LQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCE 93
V K+ + + F M LQ +P V + ++ A E F +M GCE
Sbjct: 161 VLKEQRGWRQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCE 220
Query: 94 PDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDT---------------------- 131
PDAV C T++ YAR Y + L T
Sbjct: 221 PDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDL 280
Query: 132 -------------VTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYR 178
T++ ++ Y ++ L + +MK LG P TY++++ +
Sbjct: 281 WLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVK 340
Query: 179 ARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDL 238
A A +YE+M+ GI P T +T+L Y AL ++ +M+ N+I +
Sbjct: 341 AGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVI 400
Query: 239 CNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEM 298
L++ + +G +A +FE+ + + DE T+ ++ V+ V +A ++ M
Sbjct: 401 RGLIIRIYGKLGLFHDAQSMFEETERLNLL-ADEKTYLAMSQVHLNSGNVVKALDVIEMM 459
Query: 299 IESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPME 358
+ F +++CY R L +PD C +LN+ T+ +
Sbjct: 460 KTRDIPLSRFAYIVMLQCYA-KIQNVDCAEEAFRALSKTGLPDASSCNDMLNLYTRLNLG 518
Query: 359 ELGK------LIDCIEKANEELGSVVR-YLVEGQEEGDQDFI 393
E K ++D + E + +R Y EG QD I
Sbjct: 519 EKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLI 560
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 117/273 (42%), Gaps = 1/273 (0%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIF 104
AE + L++ ++ D V + T+I A E +E+M G T T+I
Sbjct: 758 AEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMIS 817
Query: 105 AYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKP 164
Y R +D A ++ A+ LD ++ +I YG + L+++ +M+ G+KP
Sbjct: 818 VYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKP 877
Query: 165 NLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIY 224
+YN ++ +R + + M+RNG D TY TL++ Y +A
Sbjct: 878 GTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTI 937
Query: 225 REMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSC 284
+KE I ++ + LLS G ++EA + + +GI PD + +++ Y
Sbjct: 938 TLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGI-SPDSACKRTILKGYMT 996
Query: 285 FAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ +MI S + + FV + + Y
Sbjct: 997 CGDAEKGILFYEKMIRSSVEDDRFVSSVVEDLY 1029
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 8/229 (3%)
Query: 90 FGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMY---GMLED 146
G + T AT+I Y R + A+RLY A E+ ++I Y G LED
Sbjct: 664 LGLRMEEETIATLIAVYGRQHKLKEAKRLY-LAAGESKTPGKSVIRSMIDAYVRCGWLED 722
Query: 147 YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYST 206
++ + G P T + L+ A+ K A+ I I D + Y+T
Sbjct: 723 ---AYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNT 779
Query: 207 LLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSG 266
L++A + + A IY M + + ++ N ++S+ LD+A+EIF + + SG
Sbjct: 780 LIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSG 839
Query: 267 IYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
+Y DE ++++I Y K+SEA ++ +EM + G KP +VK
Sbjct: 840 LYL-DEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK 887
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 126/287 (43%), Gaps = 8/287 (2%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
LV+ + A + FK E A K F EM P+ VT++++I+ + ++A+ +E
Sbjct: 298 LVVSSYAKQGFK-----EEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYE 352
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
M G P TCAT++ Y + EN A L+ + D V +I++YG L
Sbjct: 353 DMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLG 412
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
+ +++++ + L + + TY + + + A + E MK I Y
Sbjct: 413 LFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYI 472
Query: 206 TLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSS 265
+L+ Y + A +R + + + CN +L++ + ++A + I
Sbjct: 473 VMLQCYAKIQNVDCAEEAFRALSKTGLP-DASSCNDMLNLYTRLNLGEKAKGFIKQIMVD 531
Query: 266 GIYQPDESTFSSLITVYSCFAKVSEAEAMLNEM-IESGFKPNIFVIT 311
++ D + + + VY V+EA+ ++ +M E+ K N FV T
Sbjct: 532 QVH-FDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQT 577
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 130/277 (46%), Gaps = 12/277 (4%)
Query: 28 LYNVAMKVFKKCKDFEGAEKLFD---EMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+YN + +K K F G K+ D EM++ + P+ T+ +++ + A++ F
Sbjct: 260 VYNFMLSSLQK-KSFHG--KVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAF 316
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
+M G P+ VT ++VI + + + A LY+ +++ T + ++ +Y
Sbjct: 317 GEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKT 376
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLL--AKLIYEEMKRNGISPDYI 202
E+Y + L+++ DM+ + P L+ +Y + L A+ ++EE +R + D
Sbjct: 377 ENYPKALSLFADMERNKI-PADEVIRGLIIRIY-GKLGLFHDAQSMFEETERLNLLADEK 434
Query: 203 TYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDI 262
TY + + ++ AL + MK I ++ ++L A + +D A E F +
Sbjct: 435 TYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRAL 494
Query: 263 KSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMI 299
+G+ PD S+ + ++ +Y+ +A+ + +++
Sbjct: 495 SKTGL--PDASSCNDMLNLYTRLNLGEKAKGFIKQIM 529
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 129/299 (43%), Gaps = 11/299 (3%)
Query: 19 KPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSD 78
KP G +YN + + K D + A + + M + + KPD TF +IN S D
Sbjct: 190 KPNVG----VYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFD 245
Query: 79 RAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALI 138
A++ F +M GCEP+ V+ T+I + ++ ++ R T L+
Sbjct: 246 LALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILV 305
Query: 139 KMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGIS 198
D + D+ V P+ Y +L+ + K + A + EE+ + G +
Sbjct: 306 DGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQT 365
Query: 199 PDYITYSTLLRAYIGGYLREDALGIYREMKENRI---GVTVDLCNLLLSMCADVGFLDEA 255
P +I +TL+ E A G +M I VT +L LL +C+ D
Sbjct: 366 PCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNL--LLRDLCSSDHSTD-- 421
Query: 256 VEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
+ SS Y+PDE+T+ L++ ++ + E E ++NEM++ P+IF L+
Sbjct: 422 ANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLM 480
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 108/253 (42%), Gaps = 2/253 (0%)
Query: 90 FGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTE-NWRLDTVTFSALIKMYGMLEDYD 148
F C + I AY R +D A +D K + + + ++ ++ Y D D
Sbjct: 151 FSCPELEPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMD 210
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+ L Y M KP++ T+N L+ R+ K LA ++ EMK G P+ ++++TL+
Sbjct: 211 KALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLI 270
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIY 268
R ++ E+ + + EM E + C +L+ G +D+A + D+ + +
Sbjct: 271 RGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVL 330
Query: 269 QPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXX 328
P E + SL+ K A M+ E+ + G P T LV+
Sbjct: 331 -PSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASG 389
Query: 329 XXXRGLDWGIVPD 341
+ ++ GI+PD
Sbjct: 390 FMEKMMNAGILPD 402
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 143/325 (44%), Gaps = 52/325 (16%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEW 83
K +V +N +K + K D A LFD+M R D +++ TMI+ S + A
Sbjct: 279 KNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFAL 334
Query: 84 FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGM 143
F +MP DA + ++ YA V NV++A +++ ++ TV+++++I Y
Sbjct: 335 FSEMPN----RDAHSWNMMVSGYASVGNVELARHYFEKTPEKH----TVSWNSIIAAYEK 386
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGT----------------------------------Y 169
+DY + ++++ M + G KP+ T +
Sbjct: 387 NKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVH 446
Query: 170 NTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKE 229
N L+ R + + ++ I++EMK + + IT++ ++ Y +AL ++ MK
Sbjct: 447 NALITMYSRCGEIMESRRIFDEMK---LKREVITWNAMIGGYAFHGNASEALNLFGSMKS 503
Query: 230 NRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVS 289
N I + +L+ CA G +DEA F + S +P +SSL+ V S +
Sbjct: 504 NGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFE 563
Query: 290 EAEAMLNEMIESGFKPNIFVITPLV 314
EA ++ M F+P+ V L+
Sbjct: 564 EAMYIITSM---PFEPDKTVWGALL 585
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 121/293 (41%), Gaps = 36/293 (12%)
Query: 15 RDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLC 74
R + T K V +N + ++K KD++ A LF M KPD T ++++ A
Sbjct: 363 RHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLS-ASTG 421
Query: 75 SMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTF 134
++ R ++ PD +I Y+R + + R++D K + + +T+
Sbjct: 422 LVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKR---EVITW 478
Query: 135 SALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKR 194
+A+I Y + + LN++ MK G+ P+ T+ ++L A A AK + M
Sbjct: 479 NAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMS 538
Query: 195 -NGISPDYITYSTLLRAYIGGYLREDALGIYREM----KENRIGVTVDLCN--------- 240
I P YS+L+ G E+A+ I M + G +D C
Sbjct: 539 VYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAH 598
Query: 241 ------------------LLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTF 275
LL +M AD+G DEA ++ +++S I + S++
Sbjct: 599 VAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSW 651
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 143/321 (44%), Gaps = 3/321 (0%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
YN M + K + FE + +EM + L TF + +AV FE M
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERKKAVGIFELMK 256
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
+ + T ++ + R + A+ L+D+ K E + + +T++ L+ + + +
Sbjct: 257 KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLNGWCRVRNLI 315
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+ +++DM G+KP++ +N +L + R+RK A ++ MK G P+ +Y+ ++
Sbjct: 316 EAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMI 375
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIY 268
R + E A+ + +M ++ + + L++ LD E+ ++++ G +
Sbjct: 376 RDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG-H 434
Query: 269 QPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXX 328
PD T+++LI + + A + N+MI++ +P+I ++K Y
Sbjct: 435 PPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRA 494
Query: 329 XXXRGLDWGIVPDGHCCCCLL 349
+ GI PD + L+
Sbjct: 495 VWEEMIKKGICPDDNSYTVLI 515
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 100/208 (48%), Gaps = 1/208 (0%)
Query: 12 RYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCA 71
R D I ++V +NV ++ + + A KLF M + P+ ++ MI
Sbjct: 319 RIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDF 378
Query: 72 RLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDT 131
S + A+E+F+ M G +PDA +I + + +D L + + D
Sbjct: 379 CKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDG 438
Query: 132 VTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEE 191
T++ALIK+ + + +Y+ M ++P++ T+N ++ + + AR + + ++EE
Sbjct: 439 KTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEE 498
Query: 192 MKRNGISPDYITYSTLLRAYIG-GYLRE 218
M + GI PD +Y+ L+R IG G RE
Sbjct: 499 MIKKGICPDDNSYTVLIRGLIGEGKSRE 526
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 125/271 (46%), Gaps = 10/271 (3%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINC-ARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVI 103
A+ LFD+ L+ + P+ +T+ ++N R+ ++ + A W M G +PD V ++
Sbjct: 283 AQVLFDK-LKERFTPNMMTYTVLLNGWCRVRNLIEAARIW-NDMIDQGLKPDIVAHNVML 340
Query: 104 FAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVK 163
R A +L+ K++ + +++ +I+ + + + +DDM G++
Sbjct: 341 EGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 400
Query: 164 PNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGI 223
P+ Y L+ +K + +EM+ G PD TY+ L++ + E A I
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRI 460
Query: 224 YREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYS 283
Y +M +N I ++ N+++ + ++E++ GI PD+++++ LI
Sbjct: 461 YNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGIC-PDDNSYTVLIRGLI 519
Query: 284 CFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
K EA L EM++ G K TPL+
Sbjct: 520 GEGKSREACRYLEEMLDKGMK------TPLI 544
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 78/186 (41%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
Y + ++ F K E A + FD+M+ L+PD + +I D E ++M
Sbjct: 371 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ 430
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
G PD T +I A + + A R+Y++ TF+ ++K Y M +Y+
Sbjct: 431 EKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYE 490
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
V+++M G+ P+ +Y L+ + K A EEM G+ I Y+
Sbjct: 491 MGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFA 550
Query: 209 RAYIGG 214
+ G
Sbjct: 551 ADFHRG 556
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 3/147 (2%)
Query: 161 GVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDA 220
G + TYN+++ + + R+ + EEM G+ T++ ++A+ R+ A
Sbjct: 190 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKA 248
Query: 221 LGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLIT 280
+GI+ MK+ + + V+ N LL EA +F+ +K + P+ T++ L+
Sbjct: 249 VGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER--FTPNMMTYTVLLN 306
Query: 281 VYSCFAKVSEAEAMLNEMIESGFKPNI 307
+ + EA + N+MI+ G KP+I
Sbjct: 307 GWCRVRNLIEAARIWNDMIDQGLKPDI 333
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 98/205 (47%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
++ YN + F + A++L M+++++ PD VTF+ +IN A E ++
Sbjct: 45 VLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYK 104
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
+M + P +T ++I + + + VD A+R+ D ++ D VTFS LI Y +
Sbjct: 105 EMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAK 164
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
D + ++ +M G+ N TY TL+ + A+ + EM G++PDYIT+
Sbjct: 165 RVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFH 224
Query: 206 TLLRAYIGGYLREDALGIYREMKEN 230
+L A I +++++
Sbjct: 225 CMLAGLCSKKELRKAFAILEDLQKS 249
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 115/253 (45%), Gaps = 7/253 (2%)
Query: 52 MLQRKLKPDNVTFATMINCARLCSMSDR--AVEWFEKMPGFGCEPDAVTCATVIFAYARV 109
M Q +K D V +++ RLC + A F +M G P+ +T +I ++
Sbjct: 1 MGQSHIKADVVISTAIVD--RLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHS 58
Query: 110 ENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTY 169
A++L + D VTFSALI + + +Y +M + P TY
Sbjct: 59 GRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITY 118
Query: 170 NTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREM-K 228
N+++ + + AK + + M G SPD +T+STL+ Y ++ + I+ EM +
Sbjct: 119 NSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 178
Query: 229 ENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKV 288
+ TV L+ C VG LD A ++ ++ S G+ PD TF ++ ++
Sbjct: 179 RGIVANTVTYTTLIHGFCQ-VGDLDAAQDLLNEMISCGV-APDYITFHCMLAGLCSKKEL 236
Query: 289 SEAEAMLNEMIES 301
+A A+L ++ +S
Sbjct: 237 RKAFAILEDLQKS 249
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 90/184 (48%)
Query: 12 RYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCA 71
+ LR I+ ++V ++ + F K + AE+++ EML+ + P +T+ +MI+
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 72 RLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDT 131
D A + M GC PD VT +T+I Y + + VD ++ +T
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 132 VTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEE 191
VT++ LI + + D D ++ ++M GV P+ T++ +L + ++ A I E+
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 245
Query: 192 MKRN 195
++++
Sbjct: 246 LQKS 249
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 1/214 (0%)
Query: 128 RLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKL 187
+ D V +A++ ++ N++ +M G+ PN+ TYN ++ + + + A
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66
Query: 188 IYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCA 247
+ M I+PD +T+S L+ A++ +A IY+EM I T N ++
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 248 DVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNI 307
+D+A + + + S G PD TFS+LI Y +V + EM G N
Sbjct: 127 KQDRVDDAKRMLDSMASKGC-SPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 308 FVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPD 341
T L+ + + G+ PD
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPD 219
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 132/304 (43%), Gaps = 42/304 (13%)
Query: 33 MKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLC--SMSDRAVEWFEKMPGF 90
M ++ C A +FDEM R D VT+ TMI R C + D A + FE+M
Sbjct: 153 MDMYASCGRINYARNVFDEMSHR----DVVTWNTMIE--RYCRFGLVDEAFKLFEEMKDS 206
Query: 91 GCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG-------- 142
PD + ++ A R N+ +Y+ + R+DT +AL+ MY
Sbjct: 207 NVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMA 266
Query: 143 -----------------MLEDYDQCLNVYDDMKVL---GVKPNLGTYNTLLPAVYRARKP 182
M+ Y +C + DD +V+ K +L + T++ A + P
Sbjct: 267 REFFRKMSVRNLFVSTAMVSGYSKCGRL-DDAQVIFDQTEKKDLVCWTTMISAYVESDYP 325
Query: 183 LLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLL 242
A ++EEM +GI PD ++ +++ A + + A ++ + N + + + N L
Sbjct: 326 QEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNAL 385
Query: 243 LSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESG 302
++M A G LD ++FE + + ++SS+I S + S+A ++ M +
Sbjct: 386 INMYAKCGGLDATRDVFEKMPRRNVV-----SWSSMINALSMHGEASDALSLFARMKQEN 440
Query: 303 FKPN 306
+PN
Sbjct: 441 VEPN 444
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 109/249 (43%), Gaps = 9/249 (3%)
Query: 15 RDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLC 74
R+ + + L + + + KC + A+ +FD+ K D V + TMI+
Sbjct: 267 REFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQ----TEKKDLVCWTTMISAYVES 322
Query: 75 SMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTF 134
A+ FE+M G +PD V+ +VI A A + +D A+ ++ +
Sbjct: 323 DYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSIN 382
Query: 135 SALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKR 194
+ALI MY D +V++ M + N+ ++++++ A+ + A ++ MK+
Sbjct: 383 NALINMYAKCGGLDATRDVFEKMP----RRNVVSWSSMINALSMHGEASDALSLFARMKQ 438
Query: 195 NGISPDYITYSTLLRAYIGGYLREDALGIYREMK-ENRIGVTVDLCNLLLSMCADVGFLD 253
+ P+ +T+ +L L E+ I+ M E I ++ ++ + L
Sbjct: 439 ENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLR 498
Query: 254 EAVEIFEDI 262
EA+E+ E +
Sbjct: 499 EALEVIESM 507
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 126/251 (50%), Gaps = 6/251 (2%)
Query: 51 EMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVE 110
EM+++ + D V+++ +I+ + A+ KM G EP+ +T +I ++
Sbjct: 267 EMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMG 326
Query: 111 NVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYN 170
++ A L++R + +D + LI + ++ ++ DM+ G++P++ TYN
Sbjct: 327 KLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYN 386
Query: 171 TLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKEN 230
T++ + A + A +E+ + G+ D ITYSTLL +YI + L I R E
Sbjct: 387 TVINGLCMAGRVSEA----DEVSK-GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEA 441
Query: 231 RIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSE 290
+I + + +CN+LL +G EA ++ + + PD +T++++I Y ++ E
Sbjct: 442 KIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDL-TPDTATYATMIKGYCKTGQIEE 500
Query: 291 AEAMLNEMIES 301
A M NE+ +S
Sbjct: 501 ALEMFNELRKS 511
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 123/279 (44%), Gaps = 10/279 (3%)
Query: 5 ETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTF 64
E ++ + +++ ++P L+ Y ++ K E A LF+ +L ++ D +
Sbjct: 295 EALGLLGKMIKEGVEPN----LITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLY 350
Query: 65 ATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKT 124
T+I+ +RA M G +P +T TVI V A+ + +
Sbjct: 351 VTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----S 405
Query: 125 ENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLL 184
+ D +T+S L+ Y +++ D L + + +L N LL A
Sbjct: 406 KGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGE 465
Query: 185 AKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLS 244
A +Y M ++PD TY+T+++ Y E+AL ++ E++++ + V ++ +
Sbjct: 466 ADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYNRIIDA 525
Query: 245 MCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYS 283
+C G LD A E+ ++ G+Y ++ + L ++++
Sbjct: 526 LCKK-GMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHA 563
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 103/227 (45%), Gaps = 4/227 (1%)
Query: 91 GCEPDAVTCATVIFAYARVENVDMAERLYDRA--KTENWRLDTVTFSALIKMYGMLEDYD 148
G P ++T ++I+ + +D A + + K N+ D SA+I + + +
Sbjct: 129 GAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPE 188
Query: 149 QCLNVYDDMKVLGV-KPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTL 207
L ++ GV PNL TY TL+ A+ + K + + ++ G D + YS
Sbjct: 189 LALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNW 248
Query: 208 LRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGI 267
+ Y G DAL REM E + V ++L+ + G ++EA+ + + G+
Sbjct: 249 IHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGV 308
Query: 268 YQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
+P+ T++++I K+ EA + N ++ G + + F+ L+
Sbjct: 309 -EPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLI 354
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 112/534 (20%), Positives = 201/534 (37%), Gaps = 69/534 (12%)
Query: 12 RYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCA 71
R+L KI +LV+ N+ +K F + A+ L+ M + L PD T+ATMI
Sbjct: 437 RFLEAKIP----MDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGY 492
Query: 72 RLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDT 131
+ A+E F ++ AV +I A + +D A + + LD
Sbjct: 493 CKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDI 551
Query: 132 VTFSALIK--------------MYGMLE-DYDQCLNVYDDMKVLGVKPNLGTY------- 169
T L+ +YG+ + + D CL + +D +L K G++
Sbjct: 552 HTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKR--GSFEAAIEVY 609
Query: 170 -------------NTLLPAVYRARKPLLAKLIYEEMKRNGISP-DYITYSTLLRAYIGGY 215
+T+L + + L A L+ +S D I Y+ ++
Sbjct: 610 MIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEG 669
Query: 216 LREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTF 275
AL + K + + N L++ G L EA+ +F+ +++ G+ P E T+
Sbjct: 670 FLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLV-PSEVTY 728
Query: 276 SSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLD 335
LI +AE +L+ M+ G PNI + +V Y R +
Sbjct: 729 GILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMM 788
Query: 336 WGIVPDGHCCCCLL-NIMTKTPMEELGKLIDCIEKANEE------LGSVVRYLVEGQEEG 388
+ PD ++ K MEE + + N L + + +G+ E
Sbjct: 789 GRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEE 848
Query: 389 DQDFIKE------TSALLNSTDAEI--KKPLCNCLIDLCVYLNLPNRARELFDLGST--- 437
+ ++E L+N DAE+ + + L++LC +P + L ++ ST
Sbjct: 849 ARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQGRVPQAIKILDEISSTIYP 908
Query: 438 ----LEIYKDVQFRAPTQWSLHLRRLSVGAAMTALHVWINDLCKA--LESGEEL 485
L Y+ +QF +++ +LH ++ LC + LE E
Sbjct: 909 SGKNLGSYQRLQFLNDVNEE-EIKKKDYVHDFHSLHSTVSSLCTSGKLEQANEF 961
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 155/344 (45%), Gaps = 16/344 (4%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEW 83
+ V+YN M C E A +LF R ++ D+V++A MI ++ A+E
Sbjct: 203 RNTVMYNSLMGGLLACGMIEDALQLF-----RGMEKDSVSWAAMIKGLAQNGLAKEAIEC 257
Query: 84 FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGM 143
F +M G + D +V+ A + ++ ++++ N++ SALI MY
Sbjct: 258 FREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCK 317
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYIT 203
+ V+D MK + N+ ++ ++ + + A I+ +M+R+GI PD+ T
Sbjct: 318 CKCLHYAKTVFDRMK----QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYT 373
Query: 204 YSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIK 263
+ A E+ + + + + V + N L+++ G +D++ +F ++
Sbjct: 374 LGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN 433
Query: 264 SSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK-CYGXXXX 322
D +++++++ Y+ F + E + ++M++ G KP+ +T ++ C
Sbjct: 434 VR-----DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLV 488
Query: 323 XXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTP-MEELGKLID 365
++GIVP C++++ +++ +EE + I+
Sbjct: 489 EKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFIN 532
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 115/249 (46%), Gaps = 13/249 (5%)
Query: 33 MKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGC 92
+ ++ KCK A+ +FD M Q+ + V++ M+ ++ AV+ F M G
Sbjct: 312 IDMYCKCKCLHYAKTVFDRMKQKNV----VSWTAMVVGYGQTGRAEEAVKIFLDMQRSGI 367
Query: 93 EPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLN 152
+PD T I A A V +++ + + +A T ++L+ +YG D D
Sbjct: 368 DPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTR 427
Query: 153 VYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYI 212
++++M V + ++ ++ A + + + ++++M ++G+ PD +T + ++ A
Sbjct: 428 LFNEMNV----RDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACS 483
Query: 213 GGYLREDALGIYREM-KENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPD 271
L E ++ M E I ++ + ++ + + G L+EA+ + + PD
Sbjct: 484 RAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP----FPPD 539
Query: 272 ESTFSSLIT 280
+++L++
Sbjct: 540 AIGWTTLLS 548
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 127/280 (45%), Gaps = 9/280 (3%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
+N ++ + K A ++ L+ + +PD TF +++ + ++ E +M
Sbjct: 183 FNALLRTLCQEKSMTDARNVYHS-LKHQFQPDLQTFNILLSGWKSSEEAEAFFE---EMK 238
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
G G +PD VT ++I Y + ++ A +L D+ + E D +T++ +I G++ D
Sbjct: 239 GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPD 298
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+ V +MK G P++ YN + AR+ A + +EM + G+SP+ TY+
Sbjct: 299 KAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFF 358
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFED--IKSSG 266
R + +Y M N C L+ M +D A+ ++ED +K G
Sbjct: 359 RVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFG 418
Query: 267 IYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
Y L+ + AKV EAE L EM+E G +P+
Sbjct: 419 SYS---LVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPS 455
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 100/226 (44%), Gaps = 5/226 (2%)
Query: 129 LDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLI 188
DT F+AL++ + NVY +K +P+L T+N LL + A+
Sbjct: 178 FDTACFNALLRTLCQEKSMTDARNVYHSLK-HQFQPDLQTFNILLSG---WKSSEEAEAF 233
Query: 189 YEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCAD 248
+EEMK G+ PD +TY++L+ Y E A + +M+E V ++
Sbjct: 234 FEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGL 293
Query: 249 VGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIF 308
+G D+A E+ +++K G Y PD + +++ I + ++ +A+ +++EM++ G PN
Sbjct: 294 IGQPDKAREVLKEMKEYGCY-PDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNAT 352
Query: 309 VITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTK 354
+ R L +P+ C L+ + +
Sbjct: 353 TYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKR 398
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 82/175 (46%), Gaps = 4/175 (2%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++V YN + V+ K ++ E A KL D+M + + PD +T+ T+I L D+A E
Sbjct: 245 DVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVL 304
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
++M +GC PD I + + A++L D + + T++ ++ +
Sbjct: 305 KEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLA 364
Query: 145 EDYDQCLNVYDDMKVLGVK--PNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGI 197
D + +Y +++LG + PN + L+ R K +A ++E+M G
Sbjct: 365 NDLGRSWELY--VRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGF 417
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 114/210 (54%), Gaps = 4/210 (1%)
Query: 99 CATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMK 158
A +I Y + + A+++++ + + ++F+AL+ Y + + +D +++++
Sbjct: 112 AARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELP 171
Query: 159 -VLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL-RAYIGGYL 216
L +KP++ +YNTL+ A+ A + +E++ G+ PD +T++TLL +Y+ G
Sbjct: 172 GKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQF 231
Query: 217 REDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFS 276
E I+ +M E + + + N L A+ E V +F ++K+SG+ +PD +F+
Sbjct: 232 -ELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGL-KPDVFSFN 289
Query: 277 SLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
++I K+ EAEA E+++ G++P+
Sbjct: 290 AMIRGSINEGKMDEAEAWYKEIVKHGYRPD 319
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 118/245 (48%), Gaps = 5/245 (2%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQR-KLKPDNVTFATMINCARLCSMSD--RA 80
+ ++ +N + ++ K F+ E+LF+E+ + +KPD V++ T+I LC A
Sbjct: 142 RSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKA--LCEKDSLPEA 199
Query: 81 VEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKM 140
V +++ G +PD VT T++ + ++ E ++ + +N +D T++A +
Sbjct: 200 VALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLG 259
Query: 141 YGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPD 200
+ +N++ ++K G+KP++ ++N ++ K A+ Y+E+ ++G PD
Sbjct: 260 LANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPD 319
Query: 201 YITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFE 260
T++ LL A E A+ +++E R V L+ +EA EI +
Sbjct: 320 KATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVK 379
Query: 261 DIKSS 265
K++
Sbjct: 380 IAKTN 384
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 125/255 (49%), Gaps = 2/255 (0%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
+ +Y+ ++ K E++ +E + + A +I+ M + A + FE
Sbjct: 74 IAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFE 133
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTE-NWRLDTVTFSALIKMYGML 144
+MP C+ ++ ++ AY + D+ E L++ + + + D V+++ LIK
Sbjct: 134 EMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEK 193
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
+ + + + D+++ G+KP++ T+NTLL + Y + L + I+ +M ++ D TY
Sbjct: 194 DSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTY 253
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
+ L ++ + ++ E+K + + V N ++ + G +DEA +++I
Sbjct: 254 NARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVK 313
Query: 265 SGIYQPDESTFSSLI 279
G Y+PD++TF+ L+
Sbjct: 314 HG-YRPDKATFALLL 327
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 130/280 (46%), Gaps = 5/280 (1%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
Y+ + K ++F+ +++ + R ++ F +I D+A++ F K+
Sbjct: 84 YSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKIT 143
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
F C + T+I ++ A+ +D AK R ++V+F+ LIK + D++
Sbjct: 144 SFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWE 203
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
V+D+M + V+P++ TYN+L+ + R AK + E+M + I P+ +T+ L+
Sbjct: 204 AACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLM 263
Query: 209 RAYI--GGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSG 266
+ G Y L E + + G+ +L+S G +DEA + ++K
Sbjct: 264 KGLCCKGEYNEAKKLMFDMEYRGCKPGLVN--YGILMSDLGKRGRIDEAKLLLGEMKKRR 321
Query: 267 IYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
I +PD ++ L+ +V EA +L EM G KPN
Sbjct: 322 I-KPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPN 360
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 103/230 (44%), Gaps = 1/230 (0%)
Query: 78 DRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSAL 137
+ A+ F + G D + +++I+ A+ N D +++ + N R F L
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 138 IKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGI 197
I+ YG D+ ++V+ + + + NTL+ + + AK ++ K +
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 198 SPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVE 257
P+ ++++ L++ ++ E A ++ EM E + +V N L+ + +A
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 258 IFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNI 307
+ ED+ I +P+ TF L+ C + +EA+ ++ +M G KP +
Sbjct: 243 LLEDMIKKRI-RPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGL 291
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 35/182 (19%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEK 86
V +N+ +K F D+E A K+FDEML+ +++P VT+ ++I
Sbjct: 187 VSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLI------------------ 228
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED 146
GF C R +++ A+ L + + R + VTF L+K +
Sbjct: 229 --GFLC---------------RNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGE 271
Query: 147 YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYST 206
Y++ + DM+ G KP L Y L+ + + + AKL+ EMK+ I PD + Y+
Sbjct: 272 YNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNI 331
Query: 207 LL 208
L+
Sbjct: 332 LV 333
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 66/153 (43%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE 85
+V YN + + D A+ L ++M++++++P+ VTF ++ + A +
Sbjct: 221 VVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMF 280
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
M GC+P V ++ + +D A+ L K + D V ++ L+
Sbjct: 281 DMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTEC 340
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYR 178
+ V +M++ G KPN TY ++ R
Sbjct: 341 RVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCR 373
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 126/282 (44%), Gaps = 19/282 (6%)
Query: 22 RGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAV 81
R K + N+ + + + D A K+FDEM RKL N A +I ++ +
Sbjct: 21 RKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQF----EFNEEGL 76
Query: 82 EWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMY 141
F +M G G PD T +V A + +V + ++++ LD V S+L MY
Sbjct: 77 SLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMY 136
Query: 142 ---GMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGIS 198
G L+D + + + + V+ NL +NTL+ + P +Y+ MK +G
Sbjct: 137 MRNGKLQDGEIVI------RSMPVR-NLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCR 189
Query: 199 PDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEI 258
P+ IT+ T+L + +R I+ E + V + + L+SM + G L +A +
Sbjct: 190 PNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKA 249
Query: 259 FEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIE 300
F + + DE +SS+I+ Y + EA + N M E
Sbjct: 250 FSERE-----DEDEVMWSSMISAYGFHGQGDEAIELFNTMAE 286
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 130/287 (45%), Gaps = 13/287 (4%)
Query: 28 LYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKM 87
L+N+ ++ F + E + L+ ML + TF +++ S + + ++
Sbjct: 82 LWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQI 141
Query: 88 PGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDY 147
G E D ++I +YA N +A L+DR D V+++++IK Y
Sbjct: 142 TKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEP----DDVSWNSVIKGYVKAGKM 197
Query: 148 DQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTL 207
D L ++ M + N ++ T++ +A A ++ EM+ + + PD ++ +
Sbjct: 198 DIALTLFRKM----AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANA 253
Query: 208 LRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGI 267
L A E I+ + + RI + L +L+ M A G ++EA+E+F++IK +
Sbjct: 254 LSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSV 313
Query: 268 YQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
+++LI+ Y+ EA + EM + G KPN+ T ++
Sbjct: 314 -----QAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVL 355
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 115/239 (48%), Gaps = 13/239 (5%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEK 86
V +N +K + K + A LF +M ++ + +++ TMI+ M+ A++ F +
Sbjct: 182 VSWNSVIKGYVKAGKMDIALTLFRKMAEK----NAISWTTMISGYVQADMNKEALQLFHE 237
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED 146
M EPD V+ A + A A++ ++ + ++ R+D+V LI MY +
Sbjct: 238 MQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGE 297
Query: 147 YDQCLNVYDDMKVLGVKPNLGTYNTLLP--AVYRARKPLLAKLIYEEMKRNGISPDYITY 204
++ L V+ ++K K ++ + L+ A + + ++K + EM++ GI P+ IT+
Sbjct: 298 MEEALEVFKNIK----KKSVQAWTALISGYAYHGHGREAISKFM--EMQKMGIKPNVITF 351
Query: 205 STLLRA-YIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDI 262
+ +L A G + E L Y ++ + T++ ++ + G LDEA +++
Sbjct: 352 TAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEM 410
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 142/316 (44%), Gaps = 11/316 (3%)
Query: 5 ETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEML---QRKLKPDN 61
+ A V ++R K T Y++ +K + K E A ++F E+ +R+ D
Sbjct: 159 QKAFTVFEFMRKKENVTGHT----YSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDV 214
Query: 62 VTFATMIN-CARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYD 120
V + T I+ C R+ ++ + W M G G +T + ++ + R ++A +YD
Sbjct: 215 VLYNTAISLCGRINNVYETERIW-RVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYD 273
Query: 121 RAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRAR 180
L A+I E +D L ++ M G+KPNL NTL+ ++ +A
Sbjct: 274 EMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAG 333
Query: 181 KPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMK-ENRIGVTVDLC 239
K L +Y +K G PD T++ LL A ED L ++ ++ EN + L
Sbjct: 334 KVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLY 393
Query: 240 NLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMI 299
N + C +G+ ++AV++ +++ SG+ S+++ +I+ K A + M
Sbjct: 394 NTAMVSCQKLGYWEKAVKLLYEMEGSGL-TVSTSSYNLVISACEKSRKSKVALLVYEHMA 452
Query: 300 ESGFKPNIFVITPLVK 315
+ KPN F LV+
Sbjct: 453 QRDCKPNTFTYLSLVR 468
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 127/290 (43%), Gaps = 44/290 (15%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEK 86
+ Y++ + +F +C E A ++DEM+ K+ MI+ D A++ F+
Sbjct: 250 ITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQS 309
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED 146
M G +P+ V C T+I + + V + ++Y K+ + D T++AL+
Sbjct: 310 MLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANR 369
Query: 147 YDQCLNVYD------------------------------------DMKVLGVKPNLGTYN 170
Y+ L ++D +M+ G+ + +YN
Sbjct: 370 YEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYN 429
Query: 171 TLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKEN 230
++ A ++RK +A L+YE M + P+ TY +L+R+ I G L ++ I ++++ +
Sbjct: 430 LVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKKVEPD 489
Query: 231 RIGVTVDLCNLLLS-MCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLI 279
V L N + MC F A E++ ++ G+ +PD T + ++
Sbjct: 490 -----VSLYNAAIHGMCLRREF-KFAKELYVKMREMGL-EPDGKTRAMML 532
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 82/172 (47%), Gaps = 5/172 (2%)
Query: 133 TFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEM 192
T S ++ L+ L ++D M+ LG++PN N+ L + R A ++E M
Sbjct: 109 TLSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFM 168
Query: 193 KRNGISPDYITYSTLLRAYIGGYLREDALGIYREMK---ENRIGVTVDLCNLLLSMCADV 249
++ + TYS +L+A E AL ++RE++ + R V L N +S+C +
Sbjct: 169 RKKENVTGH-TYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRI 227
Query: 250 GFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIES 301
+ E I+ +K G + E T+S L++++ + A + +EM+ +
Sbjct: 228 NNVYETERIWRVMKGDG-HIGTEITYSLLVSIFVRCGRSELALDVYDEMVNN 278
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 142/316 (44%), Gaps = 38/316 (12%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
Y +KVF K ++ A K+ D+M + P+ T++++I+ + ++A FE+M
Sbjct: 377 YCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEML 436
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFS------------- 135
GCEP++ ++ A D A RL+ ++W+ +V S
Sbjct: 437 ASGCEPNSQCFNILLHACVEACQYDRAFRLF-----QSWKGSSVNESLYADDIVSKGRTS 491
Query: 136 --ALIKMYG--MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAV----YRARKPLLAKL 187
++K G L + + K KP TYN LL A YR ++
Sbjct: 492 SPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGTDYYRGKE------ 545
Query: 188 IYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCA 247
+ +EMK G+SP+ IT+STL+ G E A+ I R M V + +CA
Sbjct: 546 LMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICA 605
Query: 248 DVGFLDEAVEIFEDIKSSGIYQPDESTFSSLI---TVYSCFAKVSEAEAMLNEMIESGFK 304
+ L A +FE+++ I +P+ T+++L+ + Y +V + A+ +M +G+K
Sbjct: 606 ENKCLKLAFSLFEEMRRYQI-KPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYK 664
Query: 305 PNIFVITPLVK--CYG 318
PN + L++ C G
Sbjct: 665 PNDHFLKELIEEWCEG 680
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 137/330 (41%), Gaps = 60/330 (18%)
Query: 39 CKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSD--RAVEWFEKMPGFGCEPDA 96
C D+ + +++++L+ +KP+ +++N + D ++ ++ M D
Sbjct: 280 CGDYVKSRYIYEDLLKENIKPNIYVINSLMNV----NSHDLGYTLKVYKNMQILDVTADM 335
Query: 97 VTCATVIFAYARVENVDMAERLYDRAKTEN----WRLDTVTFSALIKMYGMLEDYDQCLN 152
+ ++ VD+A+ +Y AK +LD T+ +IK++ + + L
Sbjct: 336 TSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALK 395
Query: 153 VYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYI 212
V DDMK +GV PN T+++L+ A A A ++EEM +G P+ ++ LL A +
Sbjct: 396 VKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACV 455
Query: 213 GGYLREDALGIYRE--------------------------MKENRIGVTVD--------- 237
+ A +++ +K N G V+
Sbjct: 456 EACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQ 515
Query: 238 ----LC--------NLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCF 285
C N+LL C + E+ +++KS G+ P++ T+S+LI +
Sbjct: 516 ASKRFCFKPTTATYNILLKACGTDYY--RGKELMDEMKSLGL-SPNQITWSTLIDMCGGS 572
Query: 286 AKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
V A +L M +G +P++ T +K
Sbjct: 573 GDVEGAVRILRTMHSAGTRPDVVAYTTAIK 602
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 11/169 (6%)
Query: 1 MENSETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKC-KDFEGAEKLFDEMLQRKLKP 59
+ + +P + R KPT YN+ + K C D+ ++L DEM L P
Sbjct: 505 VNRNSNSPYIQASKRFCFKPTTAT----YNI---LLKACGTDYYRGKELMDEMKSLGLSP 557
Query: 60 DNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLY 119
+ +T++T+I+ + AV M G PD V T I A + + +A L+
Sbjct: 558 NQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLF 617
Query: 120 DRAKTENWRLDTVTFSALIKM---YGMLEDYDQCLNVYDDMKVLGVKPN 165
+ + + + VT++ L+K YG L + QCL +Y DM+ G KPN
Sbjct: 618 EEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPN 666
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 42/217 (19%)
Query: 94 PDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNV 153
P+ C T+I + + +Y+ EN + + ++L+ + D L V
Sbjct: 265 PNMYICRTMIDVCGLCGDYVKSRYIYEDLLKENIKPNIYVINSLMNVNS--HDLGYTLKV 322
Query: 154 YDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISP----DYITYSTLLR 209
Y +M++L V ++ +YN LL A + LA+ IY+E KR S D TY T+++
Sbjct: 323 YKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIK 382
Query: 210 AYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQ 269
+ AD A+++ +D+KS G+
Sbjct: 383 VF-----------------------------------ADAKMWKWALKVKDDMKSVGV-T 406
Query: 270 PDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
P+ T+SSLI+ + V +A + EM+ SG +PN
Sbjct: 407 PNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPN 443
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
Query: 79 RAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALI 138
R E ++M G P+ +T +T+I +V+ A R+ + R D V ++ I
Sbjct: 542 RGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAI 601
Query: 139 KMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAK---LIYEEMKRN 195
K+ + +++++M+ +KPN TYNTLL A + L + IY++M+
Sbjct: 602 KICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNA 661
Query: 196 GISPDYITYSTLLRAYIGGYLREDA 220
G P+ L+ + G ++E+
Sbjct: 662 GYKPNDHFLKELIEEWCEGVIQENG 686
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 95/221 (42%), Gaps = 13/221 (5%)
Query: 137 LIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNG 196
+I +G D + Y+ K + PN+ T++ + ++ IYE++ +
Sbjct: 238 IIHGFGKKGDMVSVMTAYEACKQILDTPNMYICRTMIDVCGLCGDYVKSRYIYEDLLKEN 297
Query: 197 ISPDYITYSTLL--RAYIGGYLREDALGIYREMKENRIGVTVDLC--NLLLSMCADVGFL 252
I P+ ++L+ ++ GY L +Y+ M+ + VT D+ N+LL C G +
Sbjct: 298 IKPNIYVINSLMNVNSHDLGY----TLKVYKNMQ--ILDVTADMTSYNILLKTCCLAGRV 351
Query: 253 DEAVEIFEDIK---SSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFV 309
D A +I+++ K SSG+ + D T+ ++I V++ A + ++M G PN
Sbjct: 352 DLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHT 411
Query: 310 ITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLN 350
+ L+ L G P+ C LL+
Sbjct: 412 WSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLH 452
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 129/295 (43%), Gaps = 9/295 (3%)
Query: 15 RDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLC 74
R +I+ E+ +N+ + KC + E L M R +KPD TF + C
Sbjct: 223 RKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLF--FGWC 279
Query: 75 SMSD--RAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDT- 131
+ D +A++ E+M G +P+ T I + + VD A L+D T+ +
Sbjct: 280 RVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAP 339
Query: 132 --VTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIY 189
TF+ +I + ++C + M G P++ TY ++ + A K A
Sbjct: 340 TAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFL 399
Query: 190 EEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADV 249
+EM G PD +TY+ LR ++AL +Y M E+R +V N+L+SM ++
Sbjct: 400 DEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEM 459
Query: 250 GFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFK 304
D A + ++ Q E+ + + ++ C + EA +L E++ G K
Sbjct: 460 DDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCH-RAKEACFLLEEVVNKGLK 513
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 114/264 (43%), Gaps = 7/264 (2%)
Query: 10 VLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMIN 69
+LR +R ++KP +NV + + +D + A KL +EM++ KP+N T+ I+
Sbjct: 256 LLRRMRHRVKPDANT----FNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAID 311
Query: 70 CARLCSMSDRAVEWFEKMPGFGCE---PDAVTCATVIFAYARVENVDMAERLYDRAKTEN 126
M D A + F+ M G P A T A +I A A+ + + L R +
Sbjct: 312 TFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTG 371
Query: 127 WRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAK 186
D T+ +I+ M E D+ D+M G P++ TYN L + RK A
Sbjct: 372 CLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEAL 431
Query: 187 LIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMC 246
+Y M + +P TY+ L+ + + A + EM + V+ +++
Sbjct: 432 KLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGL 491
Query: 247 ADVGFLDEAVEIFEDIKSSGIYQP 270
D EA + E++ + G+ P
Sbjct: 492 FDCHRAKEACFLLEEVVNKGLKLP 515
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 64/149 (42%), Gaps = 4/149 (2%)
Query: 162 VKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDAL 221
VKP+ T+N L R R P A + EEM G P+ TY + + + ++A
Sbjct: 264 VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAA 323
Query: 222 GIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIK---SSGIYQPDESTFSSL 278
++ M V+ M + D+A E FE I S+G PD ST+ +
Sbjct: 324 DLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCL-PDVSTYKDV 382
Query: 279 ITVYSCFAKVSEAEAMLNEMIESGFKPNI 307
I KV EA L+EM G+ P+I
Sbjct: 383 IEGMCMAEKVDEAYKFLDEMSNKGYPPDI 411
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 127/275 (46%), Gaps = 13/275 (4%)
Query: 44 GAEKLFDEMLQ--------RKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPD 95
G K+FDE+ Q ++ P + F +IN + RA+ F++MP + C+
Sbjct: 58 GGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRT 117
Query: 96 AVTCATVIFAYARVENVD-MAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVY 154
+ +++ A + ++ M ERL + E + D T++ LI +D L ++
Sbjct: 118 VKSLNSLLSALLKCGELEKMKERL--SSIDEFGKPDACTYNILIHGCSQSGCFDDALKLF 175
Query: 155 DDMKVLGVKPNLGTYNTLLPAVYR-ARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIG 213
D+M VKP T+ TL+ + + +R K+ ++ +K G+ P Y++L++A
Sbjct: 176 DEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQ 235
Query: 214 GYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDES 273
A + E E +I V + + L+S G +E I E++ G +PD
Sbjct: 236 IGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGC-KPDTV 294
Query: 274 TFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIF 308
T++ LI + A +L+EM+E G KP++
Sbjct: 295 TYNVLINGFCVENDSESANRVLDEMVEKGLKPDVI 329
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 106/239 (44%), Gaps = 44/239 (18%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
YN+ + + F+ A KLFDEM+++K+KP VTF T+I+ LC D V+ KM
Sbjct: 155 YNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIH--GLC--KDSRVKEALKMK 210
Query: 89 G-----FGCEPDAVTCATVIFAYARVENVDMAERLYDRA--------------------- 122
+G P A++I A ++ + A +L D A
Sbjct: 211 HDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIK 270
Query: 123 --------------KTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGT 168
+ + DTVT++ LI + + D + V D+M G+KP++ +
Sbjct: 271 AGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVIS 330
Query: 169 YNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREM 227
YN +L +R +K A ++E+M R G SPD ++Y + G E+A I EM
Sbjct: 331 YNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEM 389
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 112/249 (44%), Gaps = 2/249 (0%)
Query: 58 KPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAER 117
KPD T+ +I+ D A++ F++M +P VT T+I + V A +
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 118 L-YDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAV 176
+ +D K R +++LIK + + + D+ +K + Y+TL+ ++
Sbjct: 209 MKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSL 268
Query: 177 YRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTV 236
+A + +I EEM G PD +TY+ L+ + E A + EM E + V
Sbjct: 269 IKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDV 328
Query: 237 DLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLN 296
N++L + + +EA +FED+ G PD ++ + + EA +L+
Sbjct: 329 ISYNMILGVFFRIKKWEEATYLFEDMPRRGC-SPDTLSYRIVFDGLCEGLQFEEAAVILD 387
Query: 297 EMIESGFKP 305
EM+ G+KP
Sbjct: 388 EMLFKGYKP 396
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 85/182 (46%), Gaps = 4/182 (2%)
Query: 18 IKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMS 77
++PT + +Y +K + + A KL DE + K+K D ++T+I+ S
Sbjct: 219 VRPT----VHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRS 274
Query: 78 DRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSAL 137
+ E+M GC+PD VT +I + + + A R+ D + + D ++++ +
Sbjct: 275 NEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMI 334
Query: 138 IKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGI 197
+ ++ ++ +++ +++DM G P+ +Y + + + A +I +EM G
Sbjct: 335 LGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGY 394
Query: 198 SP 199
P
Sbjct: 395 KP 396
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 114/235 (48%), Gaps = 14/235 (5%)
Query: 36 FKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPD 95
+ KC D EGA ++FD M ++ + V + ++++ ++D A++ F +M G EPD
Sbjct: 152 YSKCGDMEGARQVFDRMPEKSI----VAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPD 207
Query: 96 AVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYD 155
+ T +++ A A+ V + ++ +E L+ +ALI +Y D + V+D
Sbjct: 208 SATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFD 267
Query: 156 DMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRN-GISPDYITYSTLLRAYIGG 214
MK + N+ + ++ A A ++ +M+ + G P+ +T+ +L A
Sbjct: 268 KMK----ETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHA 323
Query: 215 YLREDALGIYREM-KENRI--GVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSG 266
L E+ +Y+ M K R+ GV +C ++ M GFLDEA + + ++G
Sbjct: 324 GLVEEGRSVYKRMTKSYRLIPGVEHHVC--MVDMLGRAGFLDEAYKFIHQLDATG 376
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 122/276 (44%), Gaps = 12/276 (4%)
Query: 28 LYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMI-NCARLCSMS-DRAVEWFE 85
L+N +K K + + ML + P N TF ++I +CA L ++ + V
Sbjct: 74 LFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHA 133
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
+ GFG D A ++ Y++ +++ A +++DR ++ V +++L+ +
Sbjct: 134 VVSGFGL--DTYVQAALVTFYSKCGDMEGARQVFDRMPEKS----IVAWNSLVSGFEQNG 187
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
D+ + V+ M+ G +P+ T+ +LL A + L +++ + G+ +
Sbjct: 188 LADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNV---- 243
Query: 206 TLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSS 265
L A I Y R +G RE+ + V ++S G+ +AVE+F ++
Sbjct: 244 KLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDD 303
Query: 266 GIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIES 301
P+ TF ++++ + V E ++ M +S
Sbjct: 304 CGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKS 339
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 109/247 (44%), Gaps = 23/247 (9%)
Query: 59 PDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERL 118
PD+ F ++I + V ++ +M P T +VI + A + + + + +
Sbjct: 70 PDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGV 129
Query: 119 YDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYR 178
+ A + LDT +AL+ Y D + V+D M + ++ +N+L+ +
Sbjct: 130 HCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMP----EKSIVAWNSLVSGFEQ 185
Query: 179 ARKPLLAKLIYEEMKRNGISPDYITYSTLLRA-------YIGGYLREDALGIYREMKENR 231
A ++ +M+ +G PD T+ +LL A +G ++ + I E +
Sbjct: 186 NGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQY---IISEGLDLN 242
Query: 232 IGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEA 291
+ + L N L S C DVG +A E+F+ +K + + + ++++I+ Y +A
Sbjct: 243 VKLGTALIN-LYSRCGDVG---KAREVFDKMKETNV-----AAWTAMISAYGTHGYGQQA 293
Query: 292 EAMLNEM 298
+ N+M
Sbjct: 294 VELFNKM 300
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 5/188 (2%)
Query: 130 DTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIY 189
D F+++IK L C+ Y M V P+ T+ +++ + + K ++
Sbjct: 71 DDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVH 130
Query: 190 EEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADV 249
+G D + L+ Y E A ++ M E I N L+S
Sbjct: 131 CHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVA----WNSLVSGFEQN 186
Query: 250 GFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFV 309
G DEA+++F ++ SG ++PD +TF SL++ + VS + +I G N+ +
Sbjct: 187 GLADEAIQVFYQMRESG-FEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKL 245
Query: 310 ITPLVKCY 317
T L+ Y
Sbjct: 246 GTALINLY 253
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 109/245 (44%), Gaps = 1/245 (0%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
Y+ + + K E E++ +M Q + PD +T +++ +RA E FE +
Sbjct: 387 YSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLK 446
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
+G PD +I Y + ERL + + + + AL++ Y + D +
Sbjct: 447 SYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDAN 506
Query: 149 QCLNVYDDMKVLGVKP-NLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTL 207
+ M+ P + Y+ + A +A + AK ++EM++ G PD + L
Sbjct: 507 GAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANL 566
Query: 208 LRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGI 267
+RAY G + AL + +++++ I + V +L+ A++G ++EA ++ I G
Sbjct: 567 VRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGE 626
Query: 268 YQPDE 272
P E
Sbjct: 627 APPFE 631
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 103/216 (47%), Gaps = 2/216 (0%)
Query: 100 ATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKV 159
+ +I +A+ +++ ER+ + D +T +AL+ MY ++++ ++++K
Sbjct: 388 SKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKS 447
Query: 160 LGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLRED 219
G++P+ Y ++ A KP L + + +EM+ + Y LLRAY
Sbjct: 448 YGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANG 507
Query: 220 ALGIYREMKENRIG-VTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSL 278
A GI M+ G ++ + +L + G +D+A F++++ G ++PD+ ++L
Sbjct: 508 AAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLG-HKPDDKCIANL 566
Query: 279 ITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
+ Y + +A +L ++ + G + + T LV
Sbjct: 567 VRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLV 602
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 143/318 (44%), Gaps = 45/318 (14%)
Query: 42 FEGAEKLFDEMLQRKL--KPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTC 99
+E A ++F E+L+ +L KP+ + +I C ++A E F++M GC +
Sbjct: 130 WESAIQVF-ELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVY 188
Query: 100 ATVIFAYARVENVDMAERLYDRAKT-ENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMK 158
++ AY+R D A L +R K+ N + D T+S LIK + + +D+ ++ DM+
Sbjct: 189 TALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMR 248
Query: 159 VLGVKPNLGTYNTLLPAVYRAR-----KPLLAKLI------------------------- 188
G++PN TYNTL+ A +A+ + L +++
Sbjct: 249 RQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQI 308
Query: 189 ------YEEMKRNGISPDYITYSTLLRAY--IGGYLREDALGIYREMKENRIGVTVDLCN 240
YE+ + +GI P+ T++ LL +Y G Y + A+ Y M++ T+ N
Sbjct: 309 EMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEY--MQKYHYSWTIVTYN 366
Query: 241 LLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIE 300
+++ G L + +F ++S I+ P T SL+ Y +K + +L +
Sbjct: 367 VVIDAFGRAGDLKQMEYLFRLMQSERIF-PSCVTLCSLVRAYGRASKADKIGGVLRFIEN 425
Query: 301 SGFKPNIFVITPLVKCYG 318
S + ++ LV YG
Sbjct: 426 SDIRLDLVFFNCLVDAYG 443
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 153/354 (43%), Gaps = 48/354 (13%)
Query: 5 ETAPVVLRYLRDKI--KPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNV 62
E+A V LR+++ KP G +Y + + KCK E A +LF EM+ ++
Sbjct: 131 ESAIQVFELLREQLWYKPNVG----IYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHE 186
Query: 63 TFATMINCARLCSMSDRAVEWFEKM-PGFGCEPDAVTCATVIFAYARVENVDMAERLYDR 121
+ +++ D A E+M C+PD T + +I ++ +V D + L
Sbjct: 187 VYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSD 246
Query: 122 AKTENWRLDTVTFSALIKMYGMLEDY-------------DQCL----------------- 151
+ + R +T+T++ LI YG + + D C
Sbjct: 247 MRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNG 306
Query: 152 ------NVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
N Y+ + G++PN+ T+N LL + ++ + E M++ S +TY+
Sbjct: 307 QIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYN 366
Query: 206 TLLRAY-IGGYLREDALGIYREMKENRIGVT-VDLCNLLLSMCADVGFLDEAVEIFEDIK 263
++ A+ G L++ ++R M+ RI + V LC+L+ + D+ + I+
Sbjct: 367 VVIDAFGRAGDLKQMEY-LFRLMQSERIFPSCVTLCSLVRAY-GRASKADKIGGVLRFIE 424
Query: 264 SSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+S I + D F+ L+ Y K +E + +L M + GFKP+ +VK Y
Sbjct: 425 NSDI-RLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAY 477
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 134/286 (46%), Gaps = 5/286 (1%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
Y++ +K F + F+ + L +M ++ ++P+ +T+ T+I+ M +M
Sbjct: 224 YSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQML 283
Query: 89 GFG-CEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDY 147
G C+PD+ T + + A+ ++M E Y++ ++ + TF+ L+ YG +Y
Sbjct: 284 GEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNY 343
Query: 148 DQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTL 207
+ V + M+ + TYN ++ A RA + ++ M+ I P +T +L
Sbjct: 344 KKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSL 403
Query: 208 LRAYIGGYLREDAL-GIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSG 266
+RAY G + D + G+ R ++ + I + + N L+ + E + E ++ G
Sbjct: 404 VRAY-GRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKG 462
Query: 267 IYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITP 312
++PD+ T+ +++ Y + + L+ ++ES + + V P
Sbjct: 463 -FKPDKITYRTMVKAYRISGMTTHVKE-LHGVVESVGEAQVVVKKP 506
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 142/342 (41%), Gaps = 42/342 (12%)
Query: 10 VLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMIN 69
R+ + + PT + +N+ M V +D EGA + + + + D + T+I+
Sbjct: 455 AFRFTKLILNPT----MSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLIS 510
Query: 70 CARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRL 129
D E F +M G E + T +I AR V A Y +++N +
Sbjct: 511 SCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKP 570
Query: 130 DTVTFSALIKMYGMLEDYDQCLNVYDDMK--VLGVKPNLGTYNTLLPA------VYRARK 181
D V F+ALI G D+ +V +MK + P+ + L+ A V RA++
Sbjct: 571 DRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKE 630
Query: 182 PL-----------------------------LAKLIYEEMKRNGISPDYITYSTLLRAYI 212
A IY++MK ++PD + +S L+
Sbjct: 631 VYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAG 690
Query: 213 GGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDE 272
+ ++A GI ++ K I + + L+ C + +A+E++E IKS + +P
Sbjct: 691 HAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKL-RPTI 749
Query: 273 STFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
ST ++LIT ++ +A L+E+ G KPN + L+
Sbjct: 750 STMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLM 791
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 118/266 (44%), Gaps = 6/266 (2%)
Query: 55 RKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPG--FGCEPDAVTCATVIFAYARVENV 112
+ +KPD V F +I+ DRA + +M +PD ++ ++ A V
Sbjct: 566 KNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQV 625
Query: 113 DMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTL 172
+ A+ +Y R ++ + D+D ++Y DMK V P+ ++ L
Sbjct: 626 ERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSAL 685
Query: 173 LPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRI 232
+ A+ A I ++ K GI I+YS+L+ A + AL +Y ++K ++
Sbjct: 686 IDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKL 745
Query: 233 GVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAE 292
T+ N L++ + L +A+E ++IK+ G+ +P+ T+S L+ +
Sbjct: 746 RPTISTMNALITALCEGNQLPKAMEYLDEIKTLGL-KPNTITYSMLMLASERKDDFEVSF 804
Query: 293 AMLNEMIESGFKPNIFV---ITPLVK 315
+L++ G PN+ + IT L K
Sbjct: 805 KLLSQAKGDGVSPNLIMCRCITSLCK 830
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 98/219 (44%), Gaps = 35/219 (15%)
Query: 28 LYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKM 87
+Y +A+ K D++ A ++ +M ++ + PD V F+ +I+ A M D A
Sbjct: 646 VYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEA------- 698
Query: 88 PGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDY 147
FG DA K++ RL T+++S+L+ +D+
Sbjct: 699 --FGILQDA--------------------------KSQGIRLGTISYSSLMGACCNAKDW 730
Query: 148 DQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTL 207
+ L +Y+ +K + ++P + T N L+ A+ + A +E+K G+ P+ ITYS L
Sbjct: 731 KKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSML 790
Query: 208 LRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMC 246
+ A E + + + K + + + +C + S+C
Sbjct: 791 MLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCITSLC 829
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 128/289 (44%), Gaps = 10/289 (3%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEML--QRKLKPDNVTFATMINCARLCSMSDRAVE 82
+L +N ++ + KLF +L Q +P TF +++ A C D ++
Sbjct: 84 DLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHA--CRAPDSSIS 141
Query: 83 WFEK----MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALI 138
+ M G EPD VT + + VD A+ L ++ DT T++ L+
Sbjct: 142 NVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLL 201
Query: 139 KMYGMLEDYDQCLNVYDDMK-VLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGI 197
K +D D+M+ VKP+L ++ L+ V ++ A + ++ G
Sbjct: 202 KHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGF 261
Query: 198 SPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVE 257
PD Y+T+++ + +A+G+Y++MKE + N L+ + G ++EA
Sbjct: 262 KPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARM 321
Query: 258 IFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
+ + +G Y+PD +T++SL+ + A ++L EM G PN
Sbjct: 322 YLKTMVDAG-YEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPN 369
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 133/280 (47%), Gaps = 10/280 (3%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAV--EWF 84
V ++A++ + + A+ L E+ ++ PD T+ ++ LC D V E+
Sbjct: 160 VTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLK--HLCKCKDLHVVYEFV 217
Query: 85 EKM-PGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGM 143
++M F +PD V+ +I +N+ A L + ++ D ++ ++K +
Sbjct: 218 DEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCT 277
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYIT 203
L + + VY MK GV+P+ TYNTL+ + +A + A++ + M G PD T
Sbjct: 278 LSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTAT 337
Query: 204 YSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLC--NLLLSMCADVGFLDEAVEIFED 261
Y++L+ AL + EM+ G + C N LL +D+ +E++E
Sbjct: 338 YTSLMNGMCRKGESLGALSLLEEMEAR--GCAPNDCTYNTLLHGLCKARLMDKGMELYEM 395
Query: 262 IKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIES 301
+KSSG+ + + + +++L+ KV+EA + + ++S
Sbjct: 396 MKSSGV-KLESNGYATLVRSLVKSGKVAEAYEVFDYAVDS 434
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 129/290 (44%), Gaps = 7/290 (2%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
Y KV CK + A LF+ ML LKP + ++I+ + D+A E M
Sbjct: 147 YTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMK 206
Query: 89 GFG-CEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDY 147
C+PD T +I ++ D+ + + TVT++ +I YG +
Sbjct: 207 SVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMF 266
Query: 148 DQCLNVYDDMKVLGVK-PNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYST 206
++ +V DM G P++ T N+++ + R + Y + G+ PD T++
Sbjct: 267 EEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNI 326
Query: 207 LLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSG 266
L+ ++ + + + M++ +T N+++ G +++ ++F +K G
Sbjct: 327 LILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQG 386
Query: 267 IYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKC 316
+ +P+ T+ SL+ YS V + +++L +++ S ++ + TP C
Sbjct: 387 V-KPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNS----DVVLDTPFFNC 431
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 92/208 (44%), Gaps = 1/208 (0%)
Query: 94 PDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNV 153
PD T ++I +Y N+ E Y R + + D TF+ LI +G Y + +V
Sbjct: 284 PDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSV 343
Query: 154 YDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIG 213
D M+ TYN ++ +A + ++ +MK G+ P+ ITY +L+ AY
Sbjct: 344 MDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSK 403
Query: 214 GYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDES 273
L + R++ + + + N +++ G L E++ ++ +PD+
Sbjct: 404 AGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKC-KPDKI 462
Query: 274 TFSSLITVYSCFAKVSEAEAMLNEMIES 301
TF+++I Y+ + + +MI S
Sbjct: 463 TFATMIKTYTAHGIFDAVQELEKQMISS 490
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 132/304 (43%), Gaps = 5/304 (1%)
Query: 15 RDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLC 74
R + + L +N + + K + A L DEM LKPD VT+ ++++
Sbjct: 144 RKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASK 203
Query: 75 SMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTF 134
+S A+ ++M G +P + ++++ A A ++ + + ++ D
Sbjct: 204 GLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVE 263
Query: 135 SALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKR 194
+ LI MY V+D M N+ +N+L+ + A A+ + M++
Sbjct: 264 TTLIDMYIKTGYLPYARMVFDMMDA----KNIVAWNSLVSGLSYACLLKDAEALMIRMEK 319
Query: 195 NGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDE 254
GI PD IT+++L Y E AL + +MKE + V + S C+ G
Sbjct: 320 EGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRN 379
Query: 255 AVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
A+++F ++ G+ P+ +T S+L+ + C + + + + + + +V T LV
Sbjct: 380 ALKVFIKMQEEGV-GPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALV 438
Query: 315 KCYG 318
YG
Sbjct: 439 DMYG 442
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/473 (20%), Positives = 195/473 (41%), Gaps = 76/473 (16%)
Query: 30 NVAMKVFKKCKDFEGAEKLFDEMLQR-----------KLKPDNVTFA------------- 65
+ +M + +C A KLFDEM +R L+ N A
Sbjct: 27 SASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAK 86
Query: 66 ----TMINCARLCSMSDRAVEWFEKMPGF----GCEPDAVTCATVIFAYARVENVDMAER 117
TM+ ++CS + E ++ G+ G E + C ++I Y+R ++++ +
Sbjct: 87 AYDSTMVKLLQVCSNKEGFAE-GRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRK 145
Query: 118 LYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVY 177
+++ K N ++++++ Y L D + + D+M++ G+KP++ T+N+LL
Sbjct: 146 VFNSMKDRN----LSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYA 201
Query: 178 RARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIG-GYLREDALGIYREMKENRIGVTV 236
A + + M+ G+ P + S+LL+A G+L+ I+ + N++ V
Sbjct: 202 SKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK-AIHGYILRNQLWYDV 260
Query: 237 DLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLIT--VYSCFAKVSEAEAM 294
+ L+ M G+L A +F+ + + I ++SL++ Y+C K +AEA+
Sbjct: 261 YVETTLIDMYIKTGYLPYARMVFDMMDAKNIV-----AWNSLVSGLSYACLLK--DAEAL 313
Query: 295 LNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTK 354
+ M + G KP+ L Y + + G+ P N+++
Sbjct: 314 MIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAP---------NVVSW 364
Query: 355 TPMEELGKLIDCIEKANEELGSVVRYLVEGQEEGDQDFIKETSALLN--------STDAE 406
T + C + N + ++ ++ QEEG S LL + E
Sbjct: 365 TAI-----FSGCSKNGN--FRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKE 417
Query: 407 IKKPLC---NCLIDLCVYLNLPNRARELFDLGSTLEIYKDVQFRAPTQWSLHL 456
+ C N + D V L + + DL S +EI+ ++ ++ W+ L
Sbjct: 418 V-HGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCML 469
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/278 (18%), Positives = 122/278 (43%), Gaps = 15/278 (5%)
Query: 5 ETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTF 64
+ +++R ++ IKP + + +N + E A + +M ++ + P+ V++
Sbjct: 309 DAEALMIRMEKEGIKP----DAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSW 364
Query: 65 ATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKT 124
+ + A++ F KM G P+A T +T++ + + + ++
Sbjct: 365 TAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLR 424
Query: 125 ENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLL 184
+N D +AL+ MYG D + ++ +K +L ++N +L +
Sbjct: 425 KNLICDAYVATALVDMYGKSGDLQSAIEIFWGIK----NKSLASWNCMLMGYAMFGRGEE 480
Query: 185 AKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGV--TVDLCNLL 242
+ M G+ PD IT++++L L ++ Y ++ +R G+ T++ C+ +
Sbjct: 481 GIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWK-YFDLMRSRYGIIPTIEHCSCM 539
Query: 243 LSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLIT 280
+ + G+LDEA + + + +PD + + + ++
Sbjct: 540 VDLLGRSGYLDEAWDFIQTMS----LKPDATIWGAFLS 573
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 123/297 (41%), Gaps = 15/297 (5%)
Query: 28 LYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPD----NVTFATMINCARLCSMSDRAVEW 83
+++ K F K F A F +M P N ++++ R+ D A+ +
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRV----DIALRF 225
Query: 84 FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMY-- 141
+ +M P+ T V+ Y R +D L + +R V+++ LI +
Sbjct: 226 YREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCE 285
Query: 142 -GMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPD 200
G+L L + + M G++PN+ T+NTL+ RA K A ++ EMK ++P+
Sbjct: 286 KGLLSS---ALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPN 342
Query: 201 YITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFE 260
+TY+TL+ Y E A Y +M N I + N L+ +A + +
Sbjct: 343 TVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVK 402
Query: 261 DIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
++ + P+ STFS+LI + MI SG PN LV +
Sbjct: 403 ELDKENLV-PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAF 458
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 11/261 (4%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIF 104
A + + EM + K+ P+ T +++ D+ +E + M G V+ T+I
Sbjct: 222 ALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 105 AYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKP 164
+ + A +L + + + VTF+ LI + + V+ +MK + V P
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAP 341
Query: 165 NLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIY 224
N TYNTL+ + +A YE+M NGI D +TY+ L+ A
Sbjct: 342 NTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFV 401
Query: 225 REM-KENRIGVTVDLCNLLLSMC----ADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLI 279
+E+ KEN + + L++ C AD GF E+++ + SG + P+E TF+ L+
Sbjct: 402 KELDKENLVPNSSTFSALIMGQCVRKNADRGF-----ELYKSMIRSGCH-PNEQTFNMLV 455
Query: 280 TVYSCFAKVSEAEAMLNEMIE 300
+ + A +L EM+
Sbjct: 456 SAFCRNEDFDGASQVLREMVR 476
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 82/192 (42%), Gaps = 5/192 (2%)
Query: 17 KIKPTRGK-----ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCA 71
K+K GK +V +N + F + + A K+F EM + P+ VT+ T+IN
Sbjct: 294 KLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGY 353
Query: 72 RLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDT 131
+ A ++E M G + D +T +IF + A + EN ++
Sbjct: 354 SQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNS 413
Query: 132 VTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEE 191
TFSALI + ++ D+ +Y M G PN T+N L+ A R A + E
Sbjct: 414 STFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLRE 473
Query: 192 MKRNGISPDYIT 203
M R I D T
Sbjct: 474 MVRRSIPLDSRT 485
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 91/208 (43%), Gaps = 3/208 (1%)
Query: 112 VDMAERLYDRAKTENWRLDTV--TFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTY 169
VD+ +++D D+ F +L K + L+ + + + MK G P + +
Sbjct: 147 VDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESC 206
Query: 170 NTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKE 229
N + ++ + +A Y EM+R ISP+ T + ++ Y + + + ++M+
Sbjct: 207 NAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMER 266
Query: 230 NRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVS 289
T N L++ + G L A+++ + SG+ QP+ TF++LI + K+
Sbjct: 267 LGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGL-QPNVVTFNTLIHGFCRAMKLQ 325
Query: 290 EAEAMLNEMIESGFKPNIFVITPLVKCY 317
EA + EM PN L+ Y
Sbjct: 326 EASKVFGEMKAVNVAPNTVTYNTLINGY 353
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 105/256 (41%), Gaps = 39/256 (15%)
Query: 9 VVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMI 68
+ LR+ R+ + N+ M + + + +L +M + + +V++ T+I
Sbjct: 221 IALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLI 280
Query: 69 --NCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTEN 126
+C + + A++ M G +P+ VT T+I + R + A +++ K N
Sbjct: 281 AGHCEK--GLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVN 338
Query: 127 WRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLL-----PAVYRARK 181
+TVT++ LI Y D++ Y+DM G++ ++ TYN L+ A R
Sbjct: 339 VAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAA 398
Query: 182 PLLAKL------------------------------IYEEMKRNGISPDYITYSTLLRAY 211
+ +L +Y+ M R+G P+ T++ L+ A+
Sbjct: 399 QFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAF 458
Query: 212 IGGYLREDALGIYREM 227
+ A + REM
Sbjct: 459 CRNEDFDGASQVLREM 474
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 123/297 (41%), Gaps = 15/297 (5%)
Query: 28 LYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPD----NVTFATMINCARLCSMSDRAVEW 83
+++ K F K F A F +M P N ++++ R+ D A+ +
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRV----DIALRF 225
Query: 84 FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMY-- 141
+ +M P+ T V+ Y R +D L + +R V+++ LI +
Sbjct: 226 YREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCE 285
Query: 142 -GMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPD 200
G+L L + + M G++PN+ T+NTL+ RA K A ++ EMK ++P+
Sbjct: 286 KGLLSS---ALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPN 342
Query: 201 YITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFE 260
+TY+TL+ Y E A Y +M N I + N L+ +A + +
Sbjct: 343 TVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVK 402
Query: 261 DIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
++ + P+ STFS+LI + MI SG PN LV +
Sbjct: 403 ELDKENLV-PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAF 458
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 11/261 (4%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIF 104
A + + EM + K+ P+ T +++ D+ +E + M G V+ T+I
Sbjct: 222 ALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 105 AYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKP 164
+ + A +L + + + VTF+ LI + + V+ +MK + V P
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAP 341
Query: 165 NLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIY 224
N TYNTL+ + +A YE+M NGI D +TY+ L+ A
Sbjct: 342 NTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFV 401
Query: 225 REM-KENRIGVTVDLCNLLLSMC----ADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLI 279
+E+ KEN + + L++ C AD GF E+++ + SG + P+E TF+ L+
Sbjct: 402 KELDKENLVPNSSTFSALIMGQCVRKNADRGF-----ELYKSMIRSGCH-PNEQTFNMLV 455
Query: 280 TVYSCFAKVSEAEAMLNEMIE 300
+ + A +L EM+
Sbjct: 456 SAFCRNEDFDGASQVLREMVR 476
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 82/192 (42%), Gaps = 5/192 (2%)
Query: 17 KIKPTRGK-----ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCA 71
K+K GK +V +N + F + + A K+F EM + P+ VT+ T+IN
Sbjct: 294 KLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGY 353
Query: 72 RLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDT 131
+ A ++E M G + D +T +IF + A + EN ++
Sbjct: 354 SQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNS 413
Query: 132 VTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEE 191
TFSALI + ++ D+ +Y M G PN T+N L+ A R A + E
Sbjct: 414 STFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLRE 473
Query: 192 MKRNGISPDYIT 203
M R I D T
Sbjct: 474 MVRRSIPLDSRT 485
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 91/208 (43%), Gaps = 3/208 (1%)
Query: 112 VDMAERLYDRAKTENWRLDTV--TFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTY 169
VD+ +++D D+ F +L K + L+ + + + MK G P + +
Sbjct: 147 VDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESC 206
Query: 170 NTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKE 229
N + ++ + +A Y EM+R ISP+ T + ++ Y + + + ++M+
Sbjct: 207 NAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMER 266
Query: 230 NRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVS 289
T N L++ + G L A+++ + SG+ QP+ TF++LI + K+
Sbjct: 267 LGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGL-QPNVVTFNTLIHGFCRAMKLQ 325
Query: 290 EAEAMLNEMIESGFKPNIFVITPLVKCY 317
EA + EM PN L+ Y
Sbjct: 326 EASKVFGEMKAVNVAPNTVTYNTLINGY 353
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 105/256 (41%), Gaps = 39/256 (15%)
Query: 9 VVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMI 68
+ LR+ R+ + N+ M + + + +L +M + + +V++ T+I
Sbjct: 221 IALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLI 280
Query: 69 --NCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTEN 126
+C + + A++ M G +P+ VT T+I + R + A +++ K N
Sbjct: 281 AGHCEK--GLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVN 338
Query: 127 WRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLL-----PAVYRARK 181
+TVT++ LI Y D++ Y+DM G++ ++ TYN L+ A R
Sbjct: 339 VAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAA 398
Query: 182 PLLAKL------------------------------IYEEMKRNGISPDYITYSTLLRAY 211
+ +L +Y+ M R+G P+ T++ L+ A+
Sbjct: 399 QFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAF 458
Query: 212 IGGYLREDALGIYREM 227
+ A + REM
Sbjct: 459 CRNEDFDGASQVLREM 474
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 120/255 (47%), Gaps = 3/255 (1%)
Query: 28 LYNVAMKVFKKCKDFEGAEKLFDEMLQRKLK-PDNVTFATMINCARLCSMSDRAVEWFEK 86
++N+ +K K D A + +EM + + P+++T++T+++C S S AVE FE
Sbjct: 198 IFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFED 257
Query: 87 M-PGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
M G PD VT +I + R V+ A+++ D K + +SAL+ + +
Sbjct: 258 MISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVG 317
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
+ +D++K G+K + Y TL+ R + A + EMK + D +TY+
Sbjct: 318 KIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYN 377
Query: 206 TLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSS 265
+LR E+AL + + + + ++L+ G L++AV+ +
Sbjct: 378 VILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSER 437
Query: 266 GIYQPDESTFSSLIT 280
GI+ P +T++ L+
Sbjct: 438 GIW-PHHATWNELVV 451
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 88/161 (54%), Gaps = 5/161 (3%)
Query: 160 LGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGIS-PDYITYSTLLRAYIGGYLRE 218
LG++PN +N L+ + A L+ EEMKR+GIS P+ ITYSTL+ +
Sbjct: 190 LGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSK 249
Query: 219 DALGIYREMKENRIGVTVD--LCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFS 276
+A+ ++ +M ++ G++ D N++++ G ++ A +I + +K +G P+ +S
Sbjct: 250 EAVELFEDMI-SKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGC-NPNVYNYS 307
Query: 277 SLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+L+ + K+ EA+ +E+ ++G K + T L+ C+
Sbjct: 308 ALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCF 348
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 96/216 (44%), Gaps = 1/216 (0%)
Query: 45 AEKLFDEMLQRK-LKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVI 103
A +LF++M+ ++ + PD VTF MIN +RA + + M GC P+ + ++
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
Query: 104 FAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVK 163
+ +V + A++ +D K +LDTV ++ L+ + + D+ + + +MK +
Sbjct: 311 NGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCR 370
Query: 164 PNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGI 223
+ TYN +L + + A + ++ G+ + +Y +L A E A+
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKF 430
Query: 224 YREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIF 259
M E I N L+ + G+ + V +
Sbjct: 431 LSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVL 466
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 80/182 (43%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEK 86
V +NV + F + + E A+K+ D M + P+ ++ ++N A + F++
Sbjct: 269 VTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDE 328
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED 146
+ G + D V T++ + R D A +L K R DT+T++ +++
Sbjct: 329 VKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGR 388
Query: 147 YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYST 206
++ L + D GV N G+Y +L A+ + A M GI P + T++
Sbjct: 389 SEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNE 448
Query: 207 LL 208
L+
Sbjct: 449 LV 450
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 128/262 (48%), Gaps = 13/262 (4%)
Query: 19 KPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSD 78
+ R E+VL+NV + + + D + A LFD+M QR + V++ TMI+ L
Sbjct: 201 RRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSV----VSWNTMISGYSLNGFFK 256
Query: 79 RAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALI 138
AVE F +M P+ VT +V+ A +R+ ++++ E L+ A+ R+D V SALI
Sbjct: 257 DAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALI 316
Query: 139 KMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGIS 198
MY ++ ++V++ + + N+ T++ ++ + A + +M++ G+
Sbjct: 317 DMYSKCGIIEKAIHVFERLP----RENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVR 372
Query: 199 PDYITYSTLLRAYIGGYLREDALGIYREMKE-NRIGVTVDLCNLLLSMCADVGFLDEAVE 257
P + Y LL A G L E+ + +M + + ++ ++ + G LDEA E
Sbjct: 373 PSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEE 432
Query: 258 IFEDIKSSGIYQPDESTFSSLI 279
++ +PD+ + +L+
Sbjct: 433 FILNMP----IKPDDVIWKALL 450
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 133/296 (44%), Gaps = 20/296 (6%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDR---AV 81
++V+ N + ++ KC E A K+F++M QR D VT+ T+I+ S DR A+
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQR----DFVTWTTLISGY---SQHDRPCDAL 146
Query: 82 EWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMY 141
+F +M FG P+ T ++VI A A +L+ + + SAL+ +Y
Sbjct: 147 LFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLY 206
Query: 142 GMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDY 201
D V+D ++ N ++N L+ R A +++ M R+G P +
Sbjct: 207 TRYGLMDDAQLVFDALE----SRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSH 262
Query: 202 ITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFED 261
+Y++L A E ++ M ++ + N LL M A G + +A +IF+
Sbjct: 263 FSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDR 322
Query: 262 IKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN-IFVITPLVKC 316
+ + D +++SL+T Y+ EA EM G +PN I ++ L C
Sbjct: 323 LA-----KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTAC 373
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 91/215 (42%), Gaps = 16/215 (7%)
Query: 23 GKELVLY--NVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRA 80
G++LV + N + ++ K A K+FD + +R D V++ +++ A
Sbjct: 292 GEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKR----DVVSWNSLLTAYAQHGFGKEA 347
Query: 81 VEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKM 140
V WFE+M G P+ ++ +V+ A + +D Y+ K + + + ++ +
Sbjct: 348 VWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDL 407
Query: 141 YGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYE---EMKRNGI 197
G D ++ L ++M ++P + LL A + L E E+ +
Sbjct: 408 LGRAGDLNRALRFIEEMP---IEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDP 464
Query: 198 SPDYITYSTLLRAYIGGYLREDALGIYREMKENRI 232
P I Y+ Y G DA + ++MKE+ +
Sbjct: 465 GPHVILYNI----YASGGRWNDAARVRKKMKESGV 495
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 87/191 (45%), Gaps = 6/191 (3%)
Query: 183 LLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLL 242
LL + +++ + I D Y+TLL+ L ++ + ++ + + N L
Sbjct: 42 LLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTL 101
Query: 243 LSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESG 302
L+M A G L+EA ++FE + Q D T+++LI+ YS + +A N+M+ G
Sbjct: 102 LNMYAKCGSLEEARKVFEKMP-----QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFG 156
Query: 303 FKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPMEELGK 362
+ PN F ++ ++K + G + H LL++ T+ + + +
Sbjct: 157 YSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQ 216
Query: 363 LI-DCIEKANE 372
L+ D +E N+
Sbjct: 217 LVFDALESRND 227
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 141/321 (43%), Gaps = 3/321 (0%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
YN M + K + FE + +EM + L TF + +AV FE M
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERKKAVGIFELMK 256
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
+ + T ++ + R + A+ L+D+ K E + + +T++ L+ + + +
Sbjct: 257 KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLNGWCRVRNLI 315
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+ +++DM G+KP++ +N +L + R+ K A ++ MK G P+ +Y+ ++
Sbjct: 316 EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMI 375
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIY 268
R + E A+ + +M ++ + + L++ LD E+ ++++ G +
Sbjct: 376 RDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG-H 434
Query: 269 QPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXX 328
PD T+++LI + + + N+MI++ +P+I ++K Y
Sbjct: 435 PPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRA 494
Query: 329 XXXRGLDWGIVPDGHCCCCLL 349
+ GI PD + L+
Sbjct: 495 VWDEMIKKGICPDDNSYTVLI 515
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 98/208 (47%), Gaps = 1/208 (0%)
Query: 12 RYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCA 71
R D I ++V +NV ++ + A KLF M + P+ ++ MI
Sbjct: 319 RIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDF 378
Query: 72 RLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDT 131
S + A+E+F+ M G +PDA +I + + +D L + + D
Sbjct: 379 CKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDG 438
Query: 132 VTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEE 191
T++ALIK+ + + +Y+ M ++P++ T+N ++ + + AR + + +++E
Sbjct: 439 KTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDE 498
Query: 192 MKRNGISPDYITYSTLLRAYIG-GYLRE 218
M + GI PD +Y+ L+R I G RE
Sbjct: 499 MIKKGICPDDNSYTVLIRGLISEGKSRE 526
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 124/271 (45%), Gaps = 10/271 (3%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINC-ARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVI 103
A+ LFD+ L+ + P+ +T+ ++N R+ ++ + A W M G +PD V ++
Sbjct: 283 AQVLFDK-LKERFTPNMMTYTVLLNGWCRVRNLIEAARIW-NDMIDHGLKPDIVAHNVML 340
Query: 104 FAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVK 163
R A +L+ K++ + +++ +I+ + + + +DDM G++
Sbjct: 341 EGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 400
Query: 164 PNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGI 223
P+ Y L+ +K + +EM+ G PD TY+ L++ + E I
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 460
Query: 224 YREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYS 283
Y +M +N I ++ N+++ + +++++ GI PD+++++ LI
Sbjct: 461 YNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGIC-PDDNSYTVLIRGLI 519
Query: 284 CFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
K EA L EM++ G K TPL+
Sbjct: 520 SEGKSREACRYLEEMLDKGMK------TPLI 544
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 70/140 (50%), Gaps = 3/140 (2%)
Query: 168 TYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREM 227
TYN+++ + + R+ + EEM G+ T++ ++A+ R+ A+GI+ M
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELM 255
Query: 228 KENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAK 287
K+ + + V+ N LL EA +F+ +K + P+ T++ L+ +
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER--FTPNMMTYTVLLNGWCRVRN 313
Query: 288 VSEAEAMLNEMIESGFKPNI 307
+ EA + N+MI+ G KP+I
Sbjct: 314 LIEAARIWNDMIDHGLKPDI 333
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 141/321 (43%), Gaps = 3/321 (0%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
YN M + K + FE + +EM + L TF + +AV FE M
Sbjct: 197 YNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERKKAVGIFELMK 255
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
+ + T ++ + R + A+ L+D+ K E + + +T++ L+ + + +
Sbjct: 256 KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLNGWCRVRNLI 314
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+ +++DM G+KP++ +N +L + R+ K A ++ MK G P+ +Y+ ++
Sbjct: 315 EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMI 374
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIY 268
R + E A+ + +M ++ + + L++ LD E+ ++++ G +
Sbjct: 375 RDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG-H 433
Query: 269 QPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXX 328
PD T+++LI + + + N+MI++ +P+I ++K Y
Sbjct: 434 PPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRA 493
Query: 329 XXXRGLDWGIVPDGHCCCCLL 349
+ GI PD + L+
Sbjct: 494 VWDEMIKKGICPDDNSYTVLI 514
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 98/208 (47%), Gaps = 1/208 (0%)
Query: 12 RYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCA 71
R D I ++V +NV ++ + A KLF M + P+ ++ MI
Sbjct: 318 RIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDF 377
Query: 72 RLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDT 131
S + A+E+F+ M G +PDA +I + + +D L + + D
Sbjct: 378 CKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDG 437
Query: 132 VTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEE 191
T++ALIK+ + + +Y+ M ++P++ T+N ++ + + AR + + +++E
Sbjct: 438 KTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDE 497
Query: 192 MKRNGISPDYITYSTLLRAYIG-GYLRE 218
M + GI PD +Y+ L+R I G RE
Sbjct: 498 MIKKGICPDDNSYTVLIRGLISEGKSRE 525
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 124/271 (45%), Gaps = 10/271 (3%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINC-ARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVI 103
A+ LFD+ L+ + P+ +T+ ++N R+ ++ + A W M G +PD V ++
Sbjct: 282 AQVLFDK-LKERFTPNMMTYTVLLNGWCRVRNLIEAARIW-NDMIDHGLKPDIVAHNVML 339
Query: 104 FAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVK 163
R A +L+ K++ + +++ +I+ + + + +DDM G++
Sbjct: 340 EGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 399
Query: 164 PNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGI 223
P+ Y L+ +K + +EM+ G PD TY+ L++ + E I
Sbjct: 400 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 459
Query: 224 YREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYS 283
Y +M +N I ++ N+++ + +++++ GI PD+++++ LI
Sbjct: 460 YNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGIC-PDDNSYTVLIRGLI 518
Query: 284 CFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
K EA L EM++ G K TPL+
Sbjct: 519 SEGKSREACRYLEEMLDKGMK------TPLI 543
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 3/147 (2%)
Query: 161 GVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDA 220
G + TYN+++ + + R+ + EEM G+ T++ ++A+ R+ A
Sbjct: 189 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKA 247
Query: 221 LGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLIT 280
+GI+ MK+ + + V+ N LL EA +F+ +K + P+ T++ L+
Sbjct: 248 VGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER--FTPNMMTYTVLLN 305
Query: 281 VYSCFAKVSEAEAMLNEMIESGFKPNI 307
+ + EA + N+MI+ G KP+I
Sbjct: 306 GWCRVRNLIEAARIWNDMIDHGLKPDI 332
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 144/335 (42%), Gaps = 18/335 (5%)
Query: 35 VFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEP 94
++ +C A ++FD++ +PD ++ +I +D AV F +M G P
Sbjct: 314 MYARCGFLNSARRVFDQIE----RPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIP 369
Query: 95 DAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVY 154
DA++ +++ A + + +++ + D ++L+ MY D C N++
Sbjct: 370 DAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLF 429
Query: 155 DDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGG 214
+D + + ++NT+L A + +P+ +++ M + PD+IT LLR +
Sbjct: 430 EDFR---NNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCV-- 484
Query: 215 YLREDALGIYREMKENRIGVTVD--LCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDE 272
+ LG + G+ + + N L+ M A G L +A IF+ + + D
Sbjct: 485 EISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNR-----DV 539
Query: 273 STFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN-IFVITPLVKCYGXXXXXXXXXXXXX 331
++S+LI Y+ EA + EM +G +PN + + L C
Sbjct: 540 VSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYAT 599
Query: 332 RGLDWGIVPDGHCCCCLLNIMTKTP-MEELGKLID 365
+ GI P C C+++++ + + E + ID
Sbjct: 600 MQTEHGISPTKEHCSCVVDLLARAGRLNEAERFID 634
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 142/350 (40%), Gaps = 27/350 (7%)
Query: 12 RYLRDKIKPTRGK-ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINC 70
R + D I + K + +L N + ++ KC A ++FD M +R L V++ ++I
Sbjct: 87 RKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNL----VSYTSVITG 142
Query: 71 ARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLD 130
A+ + KM PD ++I A A +V + ++L+ +
Sbjct: 143 YSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSH 202
Query: 131 TVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYE 190
+ +ALI MY V+ + + +L ++++++ + A +
Sbjct: 203 LIAQNALIAMYVRFNQMSDASRVFYGIPM----KDLISWSSIIAGFSQLGFEFEALSHLK 258
Query: 191 EMKRNGI-SPDYITYSTLLRAYIGGYLRED------ALGIYREMKENRIGVTVDLCNLLL 243
EM G+ P+ + + L+A LR D L I E+ N I LC+
Sbjct: 259 EMLSFGVFHPNEYIFGSSLKA-CSSLLRPDYGSQIHGLCIKSELAGNAIA-GCSLCD--- 313
Query: 244 SMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGF 303
M A GFL+ A +F+ I+ +PD ++++ +I + EA ++ ++M SGF
Sbjct: 314 -MYARCGFLNSARRVFDQIE-----RPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGF 367
Query: 304 KPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMT 353
P+ + L+ + WG + D C LL + T
Sbjct: 368 IPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYT 417
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 3/221 (1%)
Query: 79 RAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALI 138
+A+ E M G PDA ++ + NV A +L ++ + + +TVT++AL+
Sbjct: 124 KAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALV 183
Query: 139 KMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGIS 198
+ ML +Q L + + G+ PN TY+ LL A Y+ R A + +E+ G
Sbjct: 184 RGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGE 243
Query: 199 PDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLS-MCADVGFLDEAVE 257
P+ ++Y+ LL + +DA+ ++RE+ V N+LL +C D G +EA
Sbjct: 244 PNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCD-GRWEEANS 302
Query: 258 IFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEM 298
+ ++ G P T++ LI + + +A +L EM
Sbjct: 303 LLAEM-DGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEM 342
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 118/252 (46%), Gaps = 9/252 (3%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIF 104
A +L ++M + VT+ ++ + ++++++ E++ G P+A T + ++
Sbjct: 160 AMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLE 219
Query: 105 AYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKP 164
A + D A +L D + + V+++ L+ + D + ++ ++ G K
Sbjct: 220 AAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKA 279
Query: 165 NLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIY 224
N+ +YN LL + + A + EM +P +TY+ L+ + E AL +
Sbjct: 280 NVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVL 339
Query: 225 REMKE--NRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIY---QPDESTFSSLI 279
+EM + ++ VT N +++ G +D V+ +++ IY +P+E T++++
Sbjct: 340 KEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEM----IYRRCKPNEGTYNAIG 395
Query: 280 TVYSCFAKVSEA 291
++ +KV EA
Sbjct: 396 SLCEHNSKVQEA 407
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 138/305 (45%), Gaps = 31/305 (10%)
Query: 23 GKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVE 82
G +L L N ++++ K KD GAE +F EM + + N+ R SD++VE
Sbjct: 281 GGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYR----SDKSVE 336
Query: 83 WFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG 142
+ +M G +P+ VTC +V+ A R +V+ R++ + ++A++ Y
Sbjct: 337 FLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPS----VSAWNAMLSGYS 392
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
E Y++ ++ + M+ +KP+ T + +L + R R K I+ + R IS +
Sbjct: 393 NYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSH 452
Query: 203 TYSTLLRAYIGGYLREDALGIYREMKENRIGVTV--DLCNLLLSMCAD---VGF----LD 253
S L + +Y E ++ I + D N L C + GF LD
Sbjct: 453 IVSGL-------------IAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLD 499
Query: 254 -EAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITP 312
+A+ +F + + + P+E++F+++++ S + +++SG+ + FV T
Sbjct: 500 TKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETA 559
Query: 313 LVKCY 317
L Y
Sbjct: 560 LTDMY 564
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 117/262 (44%), Gaps = 28/262 (10%)
Query: 61 NVTFATMINCAR--LCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERL 118
N A+++ C R C +S + + F + G + D C ++ Y + D A ++
Sbjct: 6 NKYLASLLRCYRDERCKLSGKVIHGF--IVRMGMKSDTYLCNRLLDLYIECGDGDYARKV 63
Query: 119 YDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYR 178
+D D +++A + + D + V+D M + ++ ++N ++ + R
Sbjct: 64 FDEMSVR----DVYSWNAFLTFRCKVGDLGEACEVFDGMP----ERDVVSWNNMISVLVR 115
Query: 179 ARKPLLAKLIYEEMKRNGISPDYITYSTLLRA---YIGGY--LREDALGIYREMKENRIG 233
A ++Y+ M +G P T +++L A + G +R + + + +N
Sbjct: 116 KGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKN--- 172
Query: 234 VTVDLCNLLLSMCADVGFL-DEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAE 292
+ + N LLSM A GF+ D V +FE + QP+E +++++I + KV EA
Sbjct: 173 --IFVGNALLSMYAKCGFIVDYGVRVFESLS-----QPNEVSYTAVIGGLARENKVLEAV 225
Query: 293 AMLNEMIESGFKPNIFVITPLV 314
M M E G + + ++ ++
Sbjct: 226 QMFRLMCEKGVQVDSVCLSNIL 247
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 138/317 (43%), Gaps = 55/317 (17%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEW 83
+ +V +N + + + + A +LFDEM +R + N ++ R+ D A+
Sbjct: 138 RNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRI----DEAMNL 193
Query: 84 FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGM 143
FE+MP D V+ ++ A+ VD A RL+D N ++++A+I Y
Sbjct: 194 FERMP----RRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERN----IISWNAMITGYAQ 245
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYIT 203
D+ ++ M + + ++NT++ R R+ A +++ M + I+
Sbjct: 246 NNRIDEADQLFQVMP----ERDFASWNTMITGFIRNREMNKACGLFDRMPEKNV----IS 297
Query: 204 YSTLLRAYIGGYLREDALGIYREM-KENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDI 262
++T++ Y+ E+AL ++ +M ++ + V +LS C+D+ L E +I + I
Sbjct: 298 WTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLI 357
Query: 263 KSSGIYQPDES---------------------------------TFSSLITVYSCFAKVS 289
S ++Q +E +++S+I VY+
Sbjct: 358 -SKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGK 416
Query: 290 EAEAMLNEMIESGFKPN 306
EA M N+M + GFKP+
Sbjct: 417 EAIEMYNQMRKHGFKPS 433
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/322 (19%), Positives = 130/322 (40%), Gaps = 44/322 (13%)
Query: 17 KIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSM 76
++ P R + +N + F + ++ A LFD M ++ + +++ TMI
Sbjct: 257 QVMPER--DFASWNTMITGFIRNREMNKACGLFDRMPEKNV----ISWTTMITGYVENKE 310
Query: 77 SDRAVEWFEKMPGFGC-EPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFS 135
++ A+ F KM G +P+ T +++ A + + + ++++ + + + S
Sbjct: 311 NEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTS 370
Query: 136 ALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRN 195
AL+ MY + ++D+ V + +L ++N+++ A +Y +M+++
Sbjct: 371 ALLNMYSKSGELIAARKMFDNGLV--CQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKH 428
Query: 196 GISPDYITYSTLLRAYIGGYLREDALGIYREM--------KENRIGVTVDLCN------- 240
G P +TY LL A L E + ++++ +E VDLC
Sbjct: 429 GFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKD 488
Query: 241 ------------------LLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVY 282
+LS C + A E+ + + +G D T+ + +Y
Sbjct: 489 VTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETG--SDDAGTYVLMSNIY 546
Query: 283 SCFAKVSEAEAMLNEMIESGFK 304
+ K EA M +M E G K
Sbjct: 547 AANGKREEAAEMRMKMKEKGLK 568
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 135/302 (44%), Gaps = 17/302 (5%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMS--DRAVEW 83
L+ +N + K E A+ L EM + P+ V++ T+I LCS++ D+A+
Sbjct: 156 LITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIK--GLCSVNNVDKALYL 213
Query: 84 FEKMPGFGCEPDAVTCATVIFAYARV-----ENVDMAERLYDRAKTENWRLDTVTFSALI 138
F M +G P+ VTC ++ A + N + E + D ++ N LD V + L+
Sbjct: 214 FNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQA-NAPLDIVICTILM 272
Query: 139 KMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGIS 198
+ Q L V+ +M V + YN ++ + + + A +M + G++
Sbjct: 273 DSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVN 332
Query: 199 PDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCN---LLLSMCADVGFLDEA 255
PD TY+TL+ A ++A ++ M+ GV D + ++ +C G ++ A
Sbjct: 333 PDVFTYNTLISALCKEGKFDEACDLHGTMQNG--GVAPDQISYKVIIQGLCIH-GDVNRA 389
Query: 256 VEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
E F P+ ++ +I Y + S A ++LN M+ G KPN++ L+
Sbjct: 390 NE-FLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIH 448
Query: 316 CY 317
Y
Sbjct: 449 GY 450
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 121/281 (43%), Gaps = 5/281 (1%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSD--RAVE 82
++V+ + M K + A +++ EM Q+ + D+V + +I LCS + A
Sbjct: 264 DIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIR--GLCSSGNMVAAYG 321
Query: 83 WFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG 142
+ M G PD T T+I A + D A L+ + D +++ +I+
Sbjct: 322 FMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLC 381
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
+ D ++ M + P + +N ++ R A + M G+ P+
Sbjct: 382 IHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVY 441
Query: 203 TYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDI 262
T + L+ Y+ G DA + EM+ +I NLLL +G L A ++++++
Sbjct: 442 TNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEM 501
Query: 263 KSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGF 303
G QPD T++ L+ ++ +AE++L+ + +G
Sbjct: 502 LRRGC-QPDIITYTELVRGLCWKGRLKKAESLLSRIQATGI 541
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 133/298 (44%), Gaps = 7/298 (2%)
Query: 10 VLRYLRDK-IKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMI 68
VL+ ++D+ I P +V Y+ + K AE+ EM +K+ P+ +TF+ +I
Sbjct: 70 VLKRMKDRGISP----NVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALI 125
Query: 69 NCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWR 128
+ + ++ M +P+ T +++I+ VD A ++ D ++
Sbjct: 126 DAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCT 185
Query: 129 LDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLI 188
+ VT+S L + D + + DDM GV N + NTL+ ++A K LA +
Sbjct: 186 PNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGV 245
Query: 189 YEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCAD 248
+ M NG+ P+ +Y+ +L E AL + M++ R + + +++
Sbjct: 246 FGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCK 305
Query: 249 VGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
+ EA ++F +K + +PD ++ +I + +EA+A LN + + N
Sbjct: 306 ACMVKEAYDLFYKLKFKRV-EPDFKAYTIMIAELNRAGMRTEADA-LNRFYQKHVRQN 361
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 112/239 (46%), Gaps = 3/239 (1%)
Query: 80 AVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIK 139
A+E ++M G P+ VT +++I + + AER ++ + +TFSALI
Sbjct: 67 ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALID 126
Query: 140 MYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISP 199
Y + +VY M + + PN+ TY++L+ + + A + + M G +P
Sbjct: 127 AYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTP 186
Query: 200 DYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIF 259
+ +TYSTL + +D + + +M + + CN L+ G +D A+ +F
Sbjct: 187 NVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVF 246
Query: 260 EDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
+ S+G+ P+ +++ ++ +V +A + M ++ + ++ +IT + +G
Sbjct: 247 GYMTSNGLI-PNIRSYNIVLAGLFANGEVEKALSRFEHMQKT--RNDLDIITYTIMIHG 302
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 1/188 (0%)
Query: 130 DTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIY 189
D VT S+L+ + + + V M+ +G+K ++ L+ + + R + A +
Sbjct: 12 DIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVL 71
Query: 190 EEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADV 249
+ MK GISP+ +TYS+L+ DA EM +I V + L+ A
Sbjct: 72 KRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKR 131
Query: 250 GFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFV 309
G L + +++ + I P+ T+SSLI +V EA ML+ MI G PN+
Sbjct: 132 GKLSKVDSVYKMMIQMSI-DPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVT 190
Query: 310 ITPLVKCY 317
+ L +
Sbjct: 191 YSTLANGF 198
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Query: 191 EMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVG 250
+M + GI PD +T S+L+ + +DA+ + +M++ I V + +L+
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 251 FLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVI 310
+ A+E+ + +K GI P+ T+SSLIT ++++AE L+EM PN+
Sbjct: 63 LVVPALEVLKRMKDRGI-SPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITF 121
Query: 311 TPLVKCYG 318
+ L+ Y
Sbjct: 122 SALIDAYA 129
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 122/308 (39%), Gaps = 12/308 (3%)
Query: 54 QRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVD 113
+R PD+ TF ++C F+ G +P ++ A +
Sbjct: 348 ERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFS 407
Query: 114 MAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLL 173
+R + + +++A+I + +M+ G+ PNL T+NT L
Sbjct: 408 EGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFL 467
Query: 174 PAVYRARKPLL-AKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRI 232
Y R + + E++ +G PD IT+S ++ +DA ++EM E I
Sbjct: 468 SG-YSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGI 526
Query: 233 GVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAE 292
N+L+ C G D +V++F +K +G+ PD +++ I + KV +AE
Sbjct: 527 EPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGL-SPDLYAYNATIQSFCKMRKVKKAE 585
Query: 293 AMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIM 352
+L M+ G KP+ F + L+K G VPD +
Sbjct: 586 ELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSY--------- 636
Query: 353 TKTPMEEL 360
TK +EEL
Sbjct: 637 TKRLVEEL 644
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 84/182 (46%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
YN + K + E A EM R + P+ VTF T ++ + + EK+
Sbjct: 428 YNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLL 487
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
G +PD +T + +I R + + A + + +T++ LI+ D D
Sbjct: 488 VHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTD 547
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+ + ++ MK G+ P+L YN + + + RK A+ + + M R G+ PD TYSTL+
Sbjct: 548 RSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLI 607
Query: 209 RA 210
+A
Sbjct: 608 KA 609
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 100/202 (49%), Gaps = 9/202 (4%)
Query: 5 ETAPVVLRYLRDK-IKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVT 63
E A + L ++D+ I P LV +N + + D + + +++L KPD +T
Sbjct: 442 ENAAMFLTEMQDRGISPN----LVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVIT 497
Query: 64 FATMINCARLCSMSD--RAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDR 121
F+ +INC LC + A + F++M +G EP+ +T +I + + D + +L+ +
Sbjct: 498 FSLIINC--LCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAK 555
Query: 122 AKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARK 181
K D ++A I+ + + + + M +G+KP+ TY+TL+ A+ + +
Sbjct: 556 MKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGR 615
Query: 182 PLLAKLIYEEMKRNGISPDYIT 203
A+ ++ ++R+G PD T
Sbjct: 616 ESEAREMFSSIERHGCVPDSYT 637
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/349 (17%), Positives = 126/349 (36%), Gaps = 36/349 (10%)
Query: 28 LYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKM 87
LYN + K + A F +M KPD T+ +I+ + D A+ ++M
Sbjct: 182 LYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQM 241
Query: 88 PGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIK-------- 139
G P+ T +I + VD A + + + + T +
Sbjct: 242 EQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPP 301
Query: 140 ------MYGMLED--------YDQCLNVYDDMKVL-------------GVKPNLGTYNTL 172
+ G +E YD L + + G P+ T+N
Sbjct: 302 CKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAA 361
Query: 173 LPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRI 232
+ + + + I++ G+ P + Y L++A + + ++M + +
Sbjct: 362 MSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGL 421
Query: 233 GVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAE 292
+V N ++ ++ A +++ GI P+ TF++ ++ YS V +
Sbjct: 422 LSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGI-SPNLVTFNTFLSGYSVRGDVKKVH 480
Query: 293 AMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPD 341
+L +++ GFKP++ + ++ C L+WGI P+
Sbjct: 481 GVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPN 529
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/371 (18%), Positives = 152/371 (40%), Gaps = 12/371 (3%)
Query: 17 KIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLF--DEMLQRKLKPDNVTFATMINCARLC 74
K+ P + + CK FE D LQR V + ++ C
Sbjct: 280 KLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQR------VGYDAVLYCLSNN 333
Query: 75 SMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTF 134
SM+ ++ K+ G PD+ T + + ++ R++D + + +
Sbjct: 334 SMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGY 393
Query: 135 SALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKR 194
L++ + + + M V G+ ++ +YN ++ + +AR+ A + EM+
Sbjct: 394 LVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQD 453
Query: 195 NGISPDYITYSTLLRAY-IGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLD 253
GISP+ +T++T L Y + G +++ G+ ++ + V +L+++ +
Sbjct: 454 RGISPNLVTFNTFLSGYSVRGDVKK-VHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIK 512
Query: 254 EAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPL 313
+A + F+++ GI +P+E T++ LI + + +M E+G P+++
Sbjct: 513 DAFDCFKEMLEWGI-EPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNAT 571
Query: 314 VKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPME-ELGKLIDCIEKANE 372
++ + L G+ PD L+ ++++ E E ++ IE+
Sbjct: 572 IQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGC 631
Query: 373 ELGSVVRYLVE 383
S + LVE
Sbjct: 632 VPDSYTKRLVE 642
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 88/186 (47%), Gaps = 2/186 (1%)
Query: 114 MAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLL 173
++ L + +R+ LI +G L C +V+ + LG+KP+ YN ++
Sbjct: 128 LSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVI 187
Query: 174 PAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIG 233
A+ ++ LA L +++M+ +G PD TY+ L+ + ++A+ + ++M++
Sbjct: 188 DALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNR 247
Query: 234 VTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLIT-VYSCFAKVSEAE 292
V +L+ G +DEA++ E ++ + P+E+T + + ++ C E
Sbjct: 248 PNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKL-NPNEATIRTFVHGIFRCLPPCKAFE 306
Query: 293 AMLNEM 298
++ M
Sbjct: 307 VLVGFM 312
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 107/285 (37%), Gaps = 1/285 (0%)
Query: 57 LKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAE 116
+KP + +I+ + D A F++M GC+PD T +I + VD A
Sbjct: 176 MKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAI 235
Query: 117 RLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAV 176
RL + + E R + T++ LI + + D+ L + M+V + PN T T + +
Sbjct: 236 RLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGI 295
Query: 177 YRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTV 236
+R P A + + + Y +L + ++ R++ E
Sbjct: 296 FRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDS 355
Query: 237 DLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLN 296
N +S L E IF+ S G+ +P + + L+ + SE + L
Sbjct: 356 STFNAAMSCLLKGHDLVETCRIFDGFVSRGV-KPGFNGYLVLVQALLNAQRFSEGDRYLK 414
Query: 297 EMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPD 341
+M G +++ ++ C D GI P+
Sbjct: 415 QMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPN 459
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 123/277 (44%), Gaps = 17/277 (6%)
Query: 30 NVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPG 89
N + ++ +C+ A K+FDEM D V++ ++I A+E F +M
Sbjct: 166 NALVAMYSRCRSLSDARKVFDEMSVW----DVVSWNSIIESYAKLGKPKVALEMFSRMTN 221
Query: 90 -FGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
FGC PD +T V+ A + + ++L+ A T + + L+ MY D
Sbjct: 222 EFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMD 281
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+ V+ +M V ++ ++N ++ + + A ++E+M+ I D +T+S +
Sbjct: 282 EANTVFSNMSV----KDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAI 337
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIF-------ED 261
Y L +ALG+ R+M + I +LS CA VG L EI D
Sbjct: 338 SGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPID 397
Query: 262 IKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEM 298
++ +G + + + LI +Y+ KV A AM + +
Sbjct: 398 LRKNG-HGDENMVINQLIDMYAKCKKVDTARAMFDSL 433
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 137/304 (45%), Gaps = 50/304 (16%)
Query: 1 MENSETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPD 60
M E ++Y D K G E ++ N + ++ KCK + A +FD + + + D
Sbjct: 382 MHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPK--ERD 439
Query: 61 NVTFATMINCARLCSMSDRAVEWFEKMPGFGCE--PDAVTCATVIFAYARVENVDMAERL 118
VT+ MI +++A+E +M C+ P+A T + + A A + + + +++
Sbjct: 440 VVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQI 499
Query: 119 YDRA-KTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVY 177
+ A + + + + LI MY +C ++ D
Sbjct: 500 HAYALRNQQNAVPLFVSNCLIDMYA------KCGSISD---------------------- 531
Query: 178 RARKPLLAKLIYEEMKRNGISPDYITYSTLLRAY-IGGYLREDALGIYREMKENRIGVTV 236
A+L+++ M ++ + +T+++L+ Y + GY E+ALGI+ EM+ RIG +
Sbjct: 532 -------ARLVFDNM----MAKNEVTWTSLMTGYGMHGY-GEEALGIFDEMR--RIGFKL 577
Query: 237 DLCNLLLSM--CADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAM 294
D LL+ + C+ G +D+ +E F +K+ P ++ L+ + +++ A +
Sbjct: 578 DGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRL 637
Query: 295 LNEM 298
+ EM
Sbjct: 638 IEEM 641
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/363 (19%), Positives = 136/363 (37%), Gaps = 45/363 (12%)
Query: 77 SDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSA 136
+++ + F M PD T V A + +V E + + + + +A
Sbjct: 108 ANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNA 167
Query: 137 LIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRN- 195
L+ MY V+D+M V V ++N+++ + + KP +A ++ M
Sbjct: 168 LVAMYSRCRSLSDARKVFDEMSVWDVV----SWNSIIESYAKLGKPKVALEMFSRMTNEF 223
Query: 196 GISPDYITYSTLLR--AYIGGYLREDAL---GIYREMKENRIGVTVDLCNLLLSMCADVG 250
G PD IT +L A +G + L + EM +N + N L+ M A G
Sbjct: 224 GCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMF-----VGNCLVDMYAKCG 278
Query: 251 FLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVI 310
+DEA +F ++ D ++++++ YS + +A + +M E K ++
Sbjct: 279 MMDEANTVFSNMSVK-----DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTW 333
Query: 311 TPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPMEELGKLIDCIEKA 370
+ + Y + L GI P+ +L+ GK I C
Sbjct: 334 SAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCY--- 390
Query: 371 NEELGSVVRYLVEGQEEGDQDFIKETSALLNSTDAEIKKPLCNCLIDLCVYLNLPNRARE 430
++Y ++ ++ G D + + N LID+ + AR
Sbjct: 391 ------AIKYPIDLRKNGHGD----------------ENMVINQLIDMYAKCKKVDTARA 428
Query: 431 LFD 433
+FD
Sbjct: 429 MFD 431
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 138/296 (46%), Gaps = 17/296 (5%)
Query: 14 LRDKIKPTRGKELVLYNVAMKVFKK---CKDFEGAEKLFDEM----LQRKLKPDNVTFAT 66
+++ ++ RG +LV N K+ ++ ++E A +FD + L++ + N+ T
Sbjct: 140 MKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDT 199
Query: 67 MINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTEN 126
+ R+ ++A ++ P+A T I + + V+ A K
Sbjct: 200 LCKEKRV----EQARVVLLQLKSH-ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHG 254
Query: 127 WRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAK 186
+R ++++ +I+ Y ++ + + +M+ G PN TY T++ ++ ++ A
Sbjct: 255 FRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEAL 314
Query: 187 LIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYR-EMKENRIGVTVDLCNLLLSM 245
+ MKR+G PD + Y+ L+ E+A ++R EM E + + N +++M
Sbjct: 315 RVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAM 374
Query: 246 CADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAK--VSEAEAMLNEMI 299
D+A+E+ ++++SS + PD T+ L+ SCF + V E +L EM+
Sbjct: 375 YCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLR--SCFKRGDVVEVGKLLKEMV 428
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 111/237 (46%), Gaps = 5/237 (2%)
Query: 39 CKDFEGAE--KLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDA 96
C+ FE + ++ EM P+++T+ T+++ + A+ +M GC+PD+
Sbjct: 270 CQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDS 329
Query: 97 VTCATVIFAYARVENVDMAERLYDRAKTE-NWRLDTVTFSALIKMYGMLEDYDQCLNVYD 155
+ +I AR ++ AER++ E ++T T++++I MY ++ D+ + +
Sbjct: 330 LFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLK 389
Query: 156 DMKVLGV-KPNLGTYNTLLPAVY-RARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIG 213
+M+ + P++ TY LL + + R + KL+ E + ++ +S D TY+ L++
Sbjct: 390 EMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCR 449
Query: 214 GYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQP 270
+ E A ++ EM I C LLL + A I +K+ + P
Sbjct: 450 ANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIMKTVKLTAP 506
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 138/296 (46%), Gaps = 17/296 (5%)
Query: 14 LRDKIKPTRGKELVLYNVAMKVFKK---CKDFEGAEKLFDEM----LQRKLKPDNVTFAT 66
+++ ++ RG +LV N K+ ++ ++E A +FD + L++ + N+ T
Sbjct: 140 MKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDT 199
Query: 67 MINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTEN 126
+ R+ ++A ++ P+A T I + + V+ A K
Sbjct: 200 LCKEKRV----EQARVVLLQLKSH-ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHG 254
Query: 127 WRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAK 186
+R ++++ +I+ Y ++ + + +M+ G PN TY T++ ++ ++ A
Sbjct: 255 FRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEAL 314
Query: 187 LIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYR-EMKENRIGVTVDLCNLLLSM 245
+ MKR+G PD + Y+ L+ E+A ++R EM E + + N +++M
Sbjct: 315 RVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAM 374
Query: 246 CADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAK--VSEAEAMLNEMI 299
D+A+E+ ++++SS + PD T+ L+ SCF + V E +L EM+
Sbjct: 375 YCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLR--SCFKRGDVVEVGKLLKEMV 428
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 111/237 (46%), Gaps = 5/237 (2%)
Query: 39 CKDFEGAE--KLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDA 96
C+ FE + ++ EM P+++T+ T+++ + A+ +M GC+PD+
Sbjct: 270 CQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDS 329
Query: 97 VTCATVIFAYARVENVDMAERLYDRAKTE-NWRLDTVTFSALIKMYGMLEDYDQCLNVYD 155
+ +I AR ++ AER++ E ++T T++++I MY ++ D+ + +
Sbjct: 330 LFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLK 389
Query: 156 DMKVLGV-KPNLGTYNTLLPAVY-RARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIG 213
+M+ + P++ TY LL + + R + KL+ E + ++ +S D TY+ L++
Sbjct: 390 EMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCR 449
Query: 214 GYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQP 270
+ E A ++ EM I C LLL + A I +K+ + P
Sbjct: 450 ANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIMKTVKLTAP 506
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/412 (20%), Positives = 183/412 (44%), Gaps = 30/412 (7%)
Query: 20 PTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDR 79
P R + + +NV +K F + D E A K+F+ M + + KPD VT+ ++++C C +
Sbjct: 220 PVRNR--MSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFED 277
Query: 80 AVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIK 139
+++F M G A A +E + +AE+++ + + +ALI
Sbjct: 278 VLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIH 337
Query: 140 MYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRN---- 195
+YG +++ ++ G++ ++N+L+ + A K A ++ E++
Sbjct: 338 VYGKQGKVKDAEHLFRQIRNKGIE----SWNSLITSFVDAGKLDEALSLFSELEEMNHVC 393
Query: 196 GISPDYITYSTLLRAYIGGYLREDALGIYREMKENRI-GVTVDLCNLLLSMCADVGFLDE 254
+ + +T++++++ +D+L +R+M+ +++ +V +C +LS+CA++ L+
Sbjct: 394 NVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTIC-CILSICAELPALNL 452
Query: 255 AVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
EI + + + + + ++L+ +Y+ +SE + E+ ++ ++
Sbjct: 453 GREIHGHVIRTSMSE-NILVQNALVNMYAKCGLLSEGSLVF----EAIRDKDLISWNSII 507
Query: 315 KCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPMEELGKLI-------DCI 367
K YG R + G PDG +L+ + + E G+ I +
Sbjct: 508 KGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGL 567
Query: 368 EKANEELGSVVRYLVEGQEEGDQDFIKETSALLNSTDAEIKKPLCNCLIDLC 419
E E +V L G F+KE S ++ + E K + L++ C
Sbjct: 568 EPQQEHYACIVDLL------GRVGFLKEASEIVKNMPMEPKVCVLGALLNSC 613
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 124/284 (43%), Gaps = 6/284 (2%)
Query: 38 KCKDFEGAEKLFDEMLQ-RKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDA 96
K K E D+M + +P+ VT+ ++ D+ F+ + PD
Sbjct: 184 KAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDV 243
Query: 97 VTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDD 156
T V+ AY + + E + R ++ + D +TF+ LI YG +++++ +
Sbjct: 244 YTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKS 303
Query: 157 MKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS--TLLRAYIGG 214
+ KP L T+N+++ +AR A+ ++++M P +ITY ++ Y G
Sbjct: 304 LMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGS 363
Query: 215 YLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDEST 274
R A I+ E+ E+ + N +L + G EA ++F + + ++ PD ST
Sbjct: 364 VSR--AREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVH-PDAST 420
Query: 275 FSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
+ L Y+ + + ++ +M + G PN ++ +G
Sbjct: 421 YKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFG 464
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 7/188 (3%)
Query: 137 LIKMYGMLEDYDQCLNVYDDM-KVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRN 195
L + G + + QCL V+ M K P+ G Y+ L+ + + + +A ++ EMK +
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS 162
Query: 196 GISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGV-----TVDLCNLLLSMCADVG 250
G PD Y+ L+ A++ + AL R + G+ V N+LL A G
Sbjct: 163 GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSG 222
Query: 251 FLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVI 310
+D+ +F+D+ S + PD TF+ ++ Y + E EA+L M + KP+I
Sbjct: 223 KVDQVNALFKDLDMSPV-SPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITF 281
Query: 311 TPLVKCYG 318
L+ YG
Sbjct: 282 NVLIDSYG 289
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 94/197 (47%), Gaps = 6/197 (3%)
Query: 5 ETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTF 64
E V+ R ++ KP +++ +NV + + K ++FE E+ F +++ K KP TF
Sbjct: 261 EMEAVLTRMRSNECKP----DIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTF 316
Query: 65 ATMINCARLCSMSDRAVEW-FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAK 123
+MI M D+A EW F+KM P +T +I Y +V A +++
Sbjct: 317 NSMIINYGKARMIDKA-EWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVG 375
Query: 124 TENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPL 183
+ L T +A++++Y Y + ++ + V P+ TY L A +A
Sbjct: 376 ESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKE 435
Query: 184 LAKLIYEEMKRNGISPD 200
+++ ++M+++GI P+
Sbjct: 436 QVQILMKKMEKDGIVPN 452
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/316 (19%), Positives = 128/316 (40%), Gaps = 6/316 (1%)
Query: 54 QRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVEN-- 111
QR PDN ++ +I+ + A+ F +M GC PDA +I A+ +
Sbjct: 126 QRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKA 185
Query: 112 --VDMAERLYDRAK-TENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGT 168
++ D+ K E + + VT++ L++ + DQ ++ D+ + V P++ T
Sbjct: 186 KALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYT 245
Query: 169 YNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMK 228
+N ++ A + + + M+ N PD IT++ L+ +Y E ++ +
Sbjct: 246 FNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLM 305
Query: 229 ENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKV 288
++ T+ N ++ +D+A +F+ + Y P T+ +I +Y V
Sbjct: 306 RSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMN-YIPSFITYECMIMMYGYCGSV 364
Query: 289 SEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCL 348
S A + E+ ES + +++ Y + + PD L
Sbjct: 365 SRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFL 424
Query: 349 LNIMTKTPMEELGKLI 364
TK M+E +++
Sbjct: 425 YKAYTKADMKEQVQIL 440
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/235 (19%), Positives = 95/235 (40%), Gaps = 13/235 (5%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++ +N M + K + E + M + KPD +TF +I+ ++ + F
Sbjct: 242 DVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTF 301
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
+ + +P T ++I Y + +D AE ++ + N+ +T+ +I MYG
Sbjct: 302 KSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC 361
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
+ +++++ T N +L R + A ++ + PD TY
Sbjct: 362 GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTY 421
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIF 259
L +AY ++E + ++M+++ I + F EA+E+F
Sbjct: 422 KFLYKAYTKADMKEQVQILMKKMEKDGI-------------VPNKRFFLEALEVF 463
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 141/350 (40%), Gaps = 75/350 (21%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEK 86
+LYN + V K + FE ++FDEM +R + T+ ++N D AV FE+
Sbjct: 144 MLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFER 203
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTE-------------NW------ 127
FG + D V ++ R ++V+ AE L+ + E W
Sbjct: 204 RKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNV 263
Query: 128 ---------------RLDTVTFSALI-------------KMYGMLEDYDQ------CLNV 153
R D V++ +I ++Y + D + C NV
Sbjct: 264 HEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNV 323
Query: 154 YD----------------DMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNG- 196
D ++ G PN+ TYN+LL + + R+ + EEM+ G
Sbjct: 324 IDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGG 383
Query: 197 -ISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEA 255
SP+ +T+S LL+ +D + M +N+ +T DL NL+ + ++
Sbjct: 384 SCSPNDVTFSYLLKY---SQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKV 440
Query: 256 VEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKP 305
EI+ +++ SG+ PD+ T++ I K+ EA + EM+ G P
Sbjct: 441 REIWSEMERSGL-GPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVP 489
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 124/284 (43%), Gaps = 6/284 (2%)
Query: 38 KCKDFEGAEKLFDEMLQ-RKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDA 96
K K E D+M + +P+ VT+ ++ D+ F+ + PD
Sbjct: 184 KAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDV 243
Query: 97 VTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDD 156
T V+ AY + + E + R ++ + D +TF+ LI YG +++++ +
Sbjct: 244 YTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKS 303
Query: 157 MKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS--TLLRAYIGG 214
+ KP L T+N+++ +AR A+ ++++M P +ITY ++ Y G
Sbjct: 304 LMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGS 363
Query: 215 YLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDEST 274
R A I+ E+ E+ + N +L + G EA ++F + + ++ PD ST
Sbjct: 364 VSR--AREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVH-PDAST 420
Query: 275 FSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
+ L Y+ + + ++ +M + G PN ++ +G
Sbjct: 421 YKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFG 464
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 7/188 (3%)
Query: 137 LIKMYGMLEDYDQCLNVYDDM-KVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRN 195
L + G + + QCL V+ M K P+ G Y+ L+ + + + +A ++ EMK +
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS 162
Query: 196 GISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGV-----TVDLCNLLLSMCADVG 250
G PD Y+ L+ A++ + AL R + G+ V N+LL A G
Sbjct: 163 GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSG 222
Query: 251 FLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVI 310
+D+ +F+D+ S + PD TF+ ++ Y + E EA+L M + KP+I
Sbjct: 223 KVDQVNALFKDLDMSPV-SPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITF 281
Query: 311 TPLVKCYG 318
L+ YG
Sbjct: 282 NVLIDSYG 289
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 94/197 (47%), Gaps = 6/197 (3%)
Query: 5 ETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTF 64
E V+ R ++ KP +++ +NV + + K ++FE E+ F +++ K KP TF
Sbjct: 261 EMEAVLTRMRSNECKP----DIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTF 316
Query: 65 ATMINCARLCSMSDRAVEW-FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAK 123
+MI M D+A EW F+KM P +T +I Y +V A +++
Sbjct: 317 NSMIINYGKARMIDKA-EWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVG 375
Query: 124 TENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPL 183
+ L T +A++++Y Y + ++ + V P+ TY L A +A
Sbjct: 376 ESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKE 435
Query: 184 LAKLIYEEMKRNGISPD 200
+++ ++M+++GI P+
Sbjct: 436 QVQILMKKMEKDGIVPN 452
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/316 (19%), Positives = 128/316 (40%), Gaps = 6/316 (1%)
Query: 54 QRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVEN-- 111
QR PDN ++ +I+ + A+ F +M GC PDA +I A+ +
Sbjct: 126 QRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKA 185
Query: 112 --VDMAERLYDRAK-TENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGT 168
++ D+ K E + + VT++ L++ + DQ ++ D+ + V P++ T
Sbjct: 186 KALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYT 245
Query: 169 YNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMK 228
+N ++ A + + + M+ N PD IT++ L+ +Y E ++ +
Sbjct: 246 FNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLM 305
Query: 229 ENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKV 288
++ T+ N ++ +D+A +F+ + Y P T+ +I +Y V
Sbjct: 306 RSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMN-YIPSFITYECMIMMYGYCGSV 364
Query: 289 SEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCL 348
S A + E+ ES + +++ Y + + PD L
Sbjct: 365 SRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFL 424
Query: 349 LNIMTKTPMEELGKLI 364
TK M+E +++
Sbjct: 425 YKAYTKADMKEQVQIL 440
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/235 (19%), Positives = 95/235 (40%), Gaps = 13/235 (5%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++ +N M + K + E + M + KPD +TF +I+ ++ + F
Sbjct: 242 DVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTF 301
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
+ + +P T ++I Y + +D AE ++ + N+ +T+ +I MYG
Sbjct: 302 KSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC 361
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
+ +++++ T N +L R + A ++ + PD TY
Sbjct: 362 GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTY 421
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIF 259
L +AY ++E + ++M+++ I + F EA+E+F
Sbjct: 422 KFLYKAYTKADMKEQVQILMKKMEKDGI-------------VPNKRFFLEALEVF 463
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 133/303 (43%), Gaps = 25/303 (8%)
Query: 28 LYNVAMKVFKKCKDFEGAEKLFDEMLQ---RKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+Y MK + K ++ + M + R PD VT+ T+++ + DRA +
Sbjct: 416 IYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVL 475
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRL--DTVTFSALIKMYG 142
+M G + +T ++ Y + +D AE L R TE+ + D V+++ +I
Sbjct: 476 AEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLL-REMTEDAGIEPDVVSYNIIIDGCI 534
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNG-ISPDY 201
+++D L +++M+ G+ P +Y TL+ A + +P LA +++EM + + D
Sbjct: 535 LIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDL 594
Query: 202 ITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFED 261
I ++ L+ Y L EDA + MKEN V L + + +A+ ++++
Sbjct: 595 IAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKE 654
Query: 262 IK------------------SSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGF 303
IK + + +PDE +L + A +A ++ M E+G
Sbjct: 655 IKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGI 714
Query: 304 KPN 306
PN
Sbjct: 715 PPN 717
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 91/172 (52%), Gaps = 8/172 (4%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRK-LKPDNVTFATMINCARLCSMSDRAVEWFE 85
+ YNV +K + K + AE L EM + ++PD V++ +I+ L S A+ +F
Sbjct: 488 ITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFN 547
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTE-NWRLDTVTFSALIKMY--- 141
+M G P ++ T++ A+A +A R++D + ++D + ++ L++ Y
Sbjct: 548 EMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRL 607
Query: 142 GMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMK 193
G++ED + V MK G PN+ TY +L V +ARKP A L+++E+K
Sbjct: 608 GLIEDAQR---VVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIK 656
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 4/218 (1%)
Query: 94 PDAVTCATVIFAYARVENVDMAERLYD---RAKTENWRLDTVTFSALIKMYGMLEDYDQC 150
PD+ T++ Y + V R+ + R N D VT++ ++ + D+
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 151 LNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRN-GISPDYITYSTLLR 209
V +M +GV N TYN LL + + A+ + EM + GI PD ++Y+ ++
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 210 AYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQ 269
I AL + EM+ I T L+ A G A +F+++ + +
Sbjct: 532 GCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVK 591
Query: 270 PDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNI 307
D ++ L+ Y + +A+ +++ M E+GF PN+
Sbjct: 592 VDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNV 629
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 127/288 (44%), Gaps = 9/288 (3%)
Query: 28 LYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKM 87
L+ V M+ F + A ++ DEM + L+PD F +++ A + FE M
Sbjct: 169 LFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM 228
Query: 88 PGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDY 147
P+ ++++ + R + A+ + + K D V F+ L+ Y
Sbjct: 229 RE-KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKM 287
Query: 148 DQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPL-LAKLIYEEMKRNGISPDYITYST 206
++ +DM+ G +PN+ Y L+ A+ R K + A ++ EM+R G D +TY+
Sbjct: 288 ADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTA 347
Query: 207 LLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVG--FLDEAVEIFEDIKS 264
L+ + + + + +M++ GV + M A +E +E+ E +K
Sbjct: 348 LISGFCKWGMIDKGYSVLDDMRKK--GVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKR 405
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNI--FVI 310
G + PD ++ +I + +V EA + NEM +G P + FVI
Sbjct: 406 RGCH-PDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVI 452
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 92/204 (45%), Gaps = 1/204 (0%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINC-ARLCSMSDRAVEW 83
++V++ + + A L ++M +R +P+ + +I R D A+
Sbjct: 270 DIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRV 329
Query: 84 FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGM 143
F +M +GCE D VT +I + + +D + D + + VT+ ++ +
Sbjct: 330 FVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEK 389
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYIT 203
E +++CL + + MK G P+L YN ++ + + A ++ EM+ NG+SP T
Sbjct: 390 KEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDT 449
Query: 204 YSTLLRAYIGGYLREDALGIYREM 227
+ ++ + +A ++EM
Sbjct: 450 FVIMINGFTSQGFLIEACNHFKEM 473
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 70/128 (54%), Gaps = 2/128 (1%)
Query: 188 IYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCA 247
+ +EM + G+ PD + LL A ++A ++ +M+E +LL C
Sbjct: 189 VLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCR 248
Query: 248 DVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNI 307
+ G L EA E+ +K +G+ +PD F++L++ Y+ K+++A ++N+M + GF+PN+
Sbjct: 249 E-GKLMEAKEVLVQMKEAGL-EPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNV 306
Query: 308 FVITPLVK 315
T L++
Sbjct: 307 NCYTVLIQ 314
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 118/250 (47%), Gaps = 8/250 (3%)
Query: 60 DNVTFATMIN--CARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAER 117
D +F ++N C + S + W E M G + D V+ +++I Y++ +++ +
Sbjct: 265 DAKSFNIVLNGWCNVIGSPREAERVWME-MGNVGVKHDVVSYSSMISCYSKGGSLNKVLK 323
Query: 118 LYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKV-LGVKPNLGTYNTLLPAV 176
L+DR K E D ++A++ + N+ M+ G++PN+ TYN+L+ +
Sbjct: 324 LFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPL 383
Query: 177 YRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTV 236
+ARK AK +++EM G+ P TY +R G E+ + +M++ TV
Sbjct: 384 CKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTG---EEVFELLAKMRKMGCEPTV 440
Query: 237 DLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLN 296
+ +L+ D + +++++K + PD S++ +I K+ EA
Sbjct: 441 ETYIMLIRKLCRWRDFDNVLLLWDEMKEKTV-GPDLSSYIVMIHGLFLNGKIEEAYGYYK 499
Query: 297 EMIESGFKPN 306
EM + G +PN
Sbjct: 500 EMKDKGMRPN 509
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 96/207 (46%), Gaps = 6/207 (2%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++V Y+ + + K KLFD M + ++PD + +++ S A
Sbjct: 301 DVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLM 360
Query: 85 EKM-PGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGM 143
+ M G EP+ VT ++I + + A++++D + T+ A ++ +
Sbjct: 361 KTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR---I 417
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYIT 203
L ++ + M+ +G +P + TY L+ + R R L+++EMK + PD +
Sbjct: 418 LRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSS 477
Query: 204 YSTLLRA-YIGGYLREDALGIYREMKE 229
Y ++ ++ G + E+A G Y+EMK+
Sbjct: 478 YIVMIHGLFLNGKI-EEAYGYYKEMKD 503
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 114/282 (40%), Gaps = 40/282 (14%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATM-INCARLCSMSD--RAVEWFE 85
Y+ + + K + F+ A L DEM RK P V T+ I + C++ D +A+ F
Sbjct: 164 YHSMISILGKMRKFDTAWTLIDEM--RKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFH 221
Query: 86 KMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLE 145
F E +++ A R +NV A L + + D +F+ ++ +
Sbjct: 222 AYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLI-FCNKDKYPFDAKSFNIVLNGW---- 276
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
V+G P A+ ++ EM G+ D ++YS
Sbjct: 277 -----------CNVIG-------------------SPREAERVWMEMGNVGVKHDVVSYS 306
Query: 206 TLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSS 265
+++ Y G L ++ MK+ I + N ++ A F+ EA + + ++
Sbjct: 307 SMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEE 366
Query: 266 GIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNI 307
+P+ T++SLI K EA+ + +EM+E G P I
Sbjct: 367 KGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTI 408
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 79/191 (41%), Gaps = 40/191 (20%)
Query: 12 RYLRDKIKPTRGKE--LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMIN 69
R L ++ +G E +V YN +K K + E A+++FDEML++ L P T+ +
Sbjct: 357 RNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFM- 415
Query: 70 CARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRL 129
R+ + E KM GCEP T +I R WR
Sbjct: 416 --RILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCR------------------WR- 454
Query: 130 DTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIY 189
D+D L ++D+MK V P+L +Y ++ ++ K A Y
Sbjct: 455 ----------------DFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYY 498
Query: 190 EEMKRNGISPD 200
+EMK G+ P+
Sbjct: 499 KEMKDKGMRPN 509
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 143/301 (47%), Gaps = 33/301 (10%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEW 83
++ V +N + K + A +LFDEM QR L +++ TM++ C +A E
Sbjct: 183 RDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDL----ISWNTMLDGYARCREMSKAFEL 238
Query: 84 FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMY-- 141
FEKMP E + V+ +T++ Y++ +++MA ++D+ + VT++ +I Y
Sbjct: 239 FEKMP----ERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLP--AKNVVTWTIIIAGYAE 292
Query: 142 -GMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPD 200
G+L++ D+ + D M G+K + ++L A + L I+ +KR+ + +
Sbjct: 293 KGLLKEADRLV---DQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSN 349
Query: 201 YITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLC--NLLLSMCADVGFLDEAVEI 258
+ LL Y + A ++ ++ + DL N +L G EA+E+
Sbjct: 350 AYVLNALLDMYAKCGNLKKAFDVFNDIPKK------DLVSWNTMLHGLGVHGHGKEAIEL 403
Query: 259 FEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFK-PNIFVITPLVKCY 317
F ++ GI +PD+ TF +++ SC +++E I+ + ++ + P V+ Y
Sbjct: 404 FSRMRREGI-RPDKVTFIAVLC--SC-----NHAGLIDEGIDYFYSMEKVYDLVPQVEHY 455
Query: 318 G 318
G
Sbjct: 456 G 456
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/311 (18%), Positives = 134/311 (43%), Gaps = 46/311 (14%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEW 83
++L+ +N + + +C++ A +LF++M +R + V+++TM+ + A
Sbjct: 214 RDLISWNTMLDGYARCREMSKAFELFEKMPER----NTVSWSTMVMGYSKAGDMEMARVM 269
Query: 84 FEKMP--------------GF-------------------GCEPDAVTCATVIFAYARVE 110
F+KMP G+ G + DA +++ A
Sbjct: 270 FDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESG 329
Query: 111 NVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYN 170
+ + R++ K N + +AL+ MY + + +V++D+ K +L ++N
Sbjct: 330 LLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIP----KKDLVSWN 385
Query: 171 TLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREM-KE 229
T+L + A ++ M+R GI PD +T+ +L + L ++ + + M K
Sbjct: 386 TMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKV 445
Query: 230 NRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVS 289
+ V+ L+ + VG L EA+++ + + +P+ + +L+ +V
Sbjct: 446 YDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMP----MEPNVVIWGALLGACRMHNEVD 501
Query: 290 EAEAMLNEMIE 300
A+ +L+ +++
Sbjct: 502 IAKEVLDNLVK 512
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 112/249 (44%), Gaps = 15/249 (6%)
Query: 48 LFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPG-----FGCEPDAVTCATV 102
F EM + LK D +++ +R ++ DR F KM F E DA +++
Sbjct: 104 FFREMYKDGLKLDAFIVPSLLKASR--NLLDRE---FGKMIHCLVLKFSYESDAFIVSSL 158
Query: 103 IFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGV 162
I Y++ V A +++ + D V F+A+I Y D+ LN+ DMK+LG+
Sbjct: 159 IDMYSKFGEVGNARKVFSDLGEQ----DLVVFNAMISGYANNSQADEALNLVKDMKLLGI 214
Query: 163 KPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALG 222
KP++ T+N L+ R I E M +G PD +++++++ + + E A
Sbjct: 215 KPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFD 274
Query: 223 IYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVY 282
+++M + + LL C + ++ EI +G+ + S+L+ +Y
Sbjct: 275 AFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGL-EDHGFVRSALLDMY 333
Query: 283 SCFAKVSEA 291
+SEA
Sbjct: 334 GKCGFISEA 342
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 119/253 (47%), Gaps = 13/253 (5%)
Query: 33 MKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGC 92
+ ++ K + A K+F ++ ++ L V F MI+ S +D A+ + M G
Sbjct: 159 IDMYSKFGEVGNARKVFSDLGEQDL----VVFNAMISGYANNSQADEALNLVKDMKLLGI 214
Query: 93 EPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDY--DQC 150
+PD +T +I ++ + N + + + + ++ D V+++++I G++ ++ ++
Sbjct: 215 KPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIIS--GLVHNFQNEKA 272
Query: 151 LNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRA 210
+ + M G+ PN T TLLPA K I+ G+ S LL
Sbjct: 273 FDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDM 332
Query: 211 YIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQP 270
Y +A+ ++R+ + T N ++ A+ G D+AVE+F+ ++++G +
Sbjct: 333 YGKCGFISEAMILFRKTPKK----TTVTFNSMIFCYANHGLADKAVELFDQMEATG-EKL 387
Query: 271 DESTFSSLITVYS 283
D TF++++T S
Sbjct: 388 DHLTFTAILTACS 400
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 147/325 (45%), Gaps = 55/325 (16%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEW 83
K+ + NV M ++ K + E A K+FD++ QRK NV MI+ + A +
Sbjct: 134 KDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNV----MISGYWKWGNKEEACKL 189
Query: 84 FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGM 143
F+ MP E D V+ +I +A+V++++ A + +DR ++ V+++A++ Y
Sbjct: 190 FDMMP----ENDVVSWTVMITGFAKVKDLENARKYFDRMPEKS----VVSWNAMLSGYAQ 241
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAV-YRARKPL---LAKLIYEEMKRN---- 195
+ L +++DM LGV+PN T+ ++ A +RA L L KLI E+ R
Sbjct: 242 NGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFV 301
Query: 196 ------------------------GISPDYITYSTLLRAYIGGYLREDALGIYREMKENR 231
G + +T++ A I GY R + R++ +
Sbjct: 302 KTALLDMHAKCRDIQSARRIFNELGTQRNLVTWN----AMISGYTRIGDMSSARQLFDTM 357
Query: 232 IGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEA 291
V N L++ A G A+E FED+ G +PDE T S+++ A +
Sbjct: 358 PKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELG 417
Query: 292 EAMLN-------EMIESGFKPNIFV 309
+ +++ ++ +SG++ IF+
Sbjct: 418 DCIVDYIRKNQIKLNDSGYRSLIFM 442
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 103/207 (49%), Gaps = 9/207 (4%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEW 83
+ LV +N + + + D A +LFD M +R + V++ ++I + A+E+
Sbjct: 329 RNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNV----VSWNSLIAGYAHNGQAALAIEF 384
Query: 84 FEKMPGFG-CEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG 142
FE M +G +PD VT +V+ A + ++++ + + D + +L+ + +LI MY
Sbjct: 385 FEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYA 444
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
+ + V+D+MK + ++ +YNTL A + + +MK GI PD +
Sbjct: 445 RGGNLWEAKRVFDEMK----ERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRV 500
Query: 203 TYSTLLRAYIGGYLREDALGIYREMKE 229
TY+++L A L ++ I++ ++
Sbjct: 501 TYTSVLTACNRAGLLKEGQRIFKSIRN 527
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 16/230 (6%)
Query: 38 KCKDFEGAEKLFDEM-LQRKLKPDNVTFATMINC-ARLCSMSDRAVEWFEKMPGFGCEPD 95
KC+D + A ++F+E+ QR L VT+ MI+ R+ MS A + F+ MP + +
Sbjct: 311 KCRDIQSARRIFNELGTQRNL----VTWNAMISGYTRIGDMSS-ARQLFDTMP----KRN 361
Query: 96 AVTCATVIFAYARVENVDMA-ERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVY 154
V+ ++I YA +A E D + + D VT +++ G + D + +
Sbjct: 362 VVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIV 421
Query: 155 DDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGG 214
D ++ +K N Y +L+ R AK +++EMK D ++Y+TL A+
Sbjct: 422 DYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER----DVVSYNTLFTAFAAN 477
Query: 215 YLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
+ L + +MK+ I +L+ C G L E IF+ I++
Sbjct: 478 GDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN 527
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 123/285 (43%), Gaps = 12/285 (4%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEW 83
K ++++ M + + D A +F + R L V + T+I SD A++
Sbjct: 206 KNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDL----VIWNTLIAGYAQNGYSDDAIDA 261
Query: 84 FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGM 143
F M G G EPDAVT ++++ A A+ +D+ ++ L+ +ALI MY
Sbjct: 262 FFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAK 321
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYIT 203
D + +V++ + V V N+++ + K A ++ M+ + PD IT
Sbjct: 322 CGDLENATSVFESISVRSV----ACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEIT 377
Query: 204 YSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIK 263
+ +L A + G + L I+ EMK + V L+ + G L EA + +++
Sbjct: 378 FIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMH 437
Query: 264 SSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIF 308
+P+++ +L+ AE ++ + +G N +
Sbjct: 438 ----VKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSY 478
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 131/297 (44%), Gaps = 5/297 (1%)
Query: 22 RGKELVLYNVAMKVFKKCKDFE--GAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDR 79
RG +YN + + C++ E A L EM + L PD ++ T+I ++
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 80 AVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIK 139
A+E +M G GC VT +I A+ + +D A K D V +++LI+
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 140 MYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISP 199
+ + D+ ++D++ G P TYNTL+ + + A I+E M G+ P
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315
Query: 200 DYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIF 259
+ TY+ L+ G ++AL + M E N++++ G + +AVEI
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375
Query: 260 EDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIE--SGFKPNIFVITPLV 314
E +K +PD T++ L+ + EA +L M++ S P++ L+
Sbjct: 376 ELMKKRRT-RPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 118/267 (44%), Gaps = 1/267 (0%)
Query: 14 LRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARL 73
LR+ + + ++ YN ++ F + K+ E A +L +EM VT+ +I+
Sbjct: 165 LREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCK 224
Query: 74 CSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVT 133
D A+ + ++M G E D V ++I + +D + L+D +T
Sbjct: 225 AGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAIT 284
Query: 134 FSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMK 193
++ LI+ + L + +++ M GV+PN+ TY L+ + K A + M
Sbjct: 285 YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMI 344
Query: 194 RNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLD 253
P+ +TY+ ++ L DA+ I MK+ R N+LL G LD
Sbjct: 345 EKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLD 404
Query: 254 EAVE-IFEDIKSSGIYQPDESTFSSLI 279
EA + ++ +K S PD ++++LI
Sbjct: 405 EASKLLYLMLKDSSYTDPDVISYNALI 431
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 13/216 (6%)
Query: 108 RVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQ------CLNVYDDMKVLG 161
R N ++A Y + L+T TF + + G+LE Y Q V M G
Sbjct: 84 RSRNHELAFSFYRKM------LETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRG 137
Query: 162 VKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDAL 221
N+ +N LL + R + A + EM+RN + PD +Y+T++R + G E AL
Sbjct: 138 FAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKAL 197
Query: 222 GIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITV 281
+ EMK + ++ +L+ G +DEA+ +++K G+ + D ++SLI
Sbjct: 198 ELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGL-EADLVVYTSLIRG 256
Query: 282 YSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ ++ +A+ +E++E G P L++ +
Sbjct: 257 FCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/370 (19%), Positives = 153/370 (41%), Gaps = 24/370 (6%)
Query: 27 VLYNVAMKVFKKCKD--FEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSD----RA 80
V YN+ + K CKD A ++ + M +R+ +PDN+T+ ++ LC+ D
Sbjct: 353 VTYNIIIN--KLCKDGLVADAVEIVELMKKRRTRPDNITYNILL--GGLCAKGDLDEASK 408
Query: 81 VEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKM 140
+ + +PD ++ +I + + A +YD + D VT + L+
Sbjct: 409 LLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNS 468
Query: 141 YGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPD 200
D ++ + ++ + + N TY ++ + +AK + +M+ + + P
Sbjct: 469 TLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPS 528
Query: 201 YITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFE 260
Y+ LL + + A ++ EM+ + V N+++ G + A +
Sbjct: 529 VFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLV 588
Query: 261 DIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXX 320
+ +G+ PD T+S LI + + EA + ++M++SGF+P+ + ++K
Sbjct: 589 GMSRAGL-SPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQ 647
Query: 321 XXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPMEELGKLIDCIEKANEELGSVVRY 380
+ +D IV D C +++ M C AN +L +
Sbjct: 648 GETDKLTELVKKLVDKDIVLDKELTCTVMDYM-------------CNSSANMDLAKRLLR 694
Query: 381 LVEGQEEGDQ 390
+ + +EE D+
Sbjct: 695 VTDDKEERDK 704
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 116/265 (43%), Gaps = 2/265 (0%)
Query: 11 LRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINC 70
L YL K +++ YN + K A ++D ++++ D VT ++N
Sbjct: 409 LLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNS 468
Query: 71 ARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLD 130
++A+E ++++ ++ T +I + + +++A+ L + + +
Sbjct: 469 TLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPS 528
Query: 131 TVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYE 190
++ L+ DQ ++++M+ P++ ++N ++ +A A+ +
Sbjct: 529 VFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLV 588
Query: 191 EMKRNGISPDYITYSTLLRAYIG-GYLREDALGIYREMKENRIGVTVDLCNLLLSMCADV 249
M R G+SPD TYS L+ ++ GYL E A+ + +M ++ +C+ +L C
Sbjct: 589 GMSRAGLSPDLFTYSKLINRFLKLGYLDE-AISFFDKMVDSGFEPDAHICDSVLKYCISQ 647
Query: 250 GFLDEAVEIFEDIKSSGIYQPDEST 274
G D+ E+ + + I E T
Sbjct: 648 GETDKLTELVKKLVDKDIVLDKELT 672
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 118/262 (45%), Gaps = 10/262 (3%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEML--QRKLKPDNVTFATMINCARLCSMSDRAVE 82
+L +N ++ + KLF +L Q +P TF +++ A C D ++
Sbjct: 84 DLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHA--CRAPDSSIS 141
Query: 83 WFEK----MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALI 138
+ M G EPD VT + + VD A+ L ++ DT T++ L+
Sbjct: 142 NVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLL 201
Query: 139 KMYGMLEDYDQCLNVYDDMKV-LGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGI 197
K +D D+M+ VKP+L ++ L+ V ++ A + ++ G
Sbjct: 202 KHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGF 261
Query: 198 SPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVE 257
PD Y+T+++ + +A+G+Y++MKE + N L+ + G ++EA
Sbjct: 262 KPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARM 321
Query: 258 IFEDIKSSGIYQPDESTFSSLI 279
+ + +G Y+PD +T++SL+
Sbjct: 322 YLKTMVDAG-YEPDTATYTSLM 342
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/388 (20%), Positives = 167/388 (43%), Gaps = 55/388 (14%)
Query: 18 IKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMS 77
+K G ++ + N + + C D + A K+F + ++ D V++ +MIN
Sbjct: 158 VKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK----DVVSWNSMINGFVQKGSP 213
Query: 78 DRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDM----------------------- 114
D+A+E F+KM + VT V+ A A++ N++
Sbjct: 214 DKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAM 273
Query: 115 ------------AERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGV 162
A+RL+D + + D VT++ ++ Y + EDY+ V + M
Sbjct: 274 LDMYTKCGSIEDAKRLFDAMEEK----DNVTWTTMLDGYAISEDYEAAREVLNSMP---- 325
Query: 163 KPNLGTYNTLLPAVYRARKPLLAKLIYEEMK-RNGISPDYITYSTLLRAYIGGYLREDAL 221
+ ++ +N L+ A + KP A +++ E++ + + + IT + L A E
Sbjct: 326 QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR 385
Query: 222 GIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITV 281
I+ +K++ I + + + L+ M + G L+++ E+F ++ ++ +S++I
Sbjct: 386 WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVF-----VWSAMIGG 440
Query: 282 YSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV-KCYGXXXXXXXXXXXXXRGLDWGIVP 340
+ +EA M +M E+ KPN T + C ++GIVP
Sbjct: 441 LAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVP 500
Query: 341 DGHCCCCLLNIMTKTP-MEELGKLIDCI 367
+ C+++++ ++ +E+ K I+ +
Sbjct: 501 EEKHYACIVDVLGRSGYLEKAVKFIEAM 528
>AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:1258581-1260265 FORWARD
LENGTH=532
Length = 532
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 100/208 (48%), Gaps = 4/208 (1%)
Query: 5 ETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTF 64
E PV+++ L+ + P ++V YN+ + F D EGAEK++ + + KL PD VT+
Sbjct: 214 EKVPVLIKELKIRTSP----DIVTYNLWLTAFASGNDVEGAEKVYLKAKEEKLNPDWVTY 269
Query: 65 ATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKT 124
+ + N ++A ++M + + V A++I +A + + D + + K+
Sbjct: 270 SVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKS 329
Query: 125 ENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLL 184
+++ + ++I L +++Q +YD+ + + + N +L + LL
Sbjct: 330 SFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLILAEYMNRDEVLL 389
Query: 185 AKLIYEEMKRNGISPDYITYSTLLRAYI 212
+ YE + GI+P Y T+ L AY+
Sbjct: 390 GEKFYERIVEKGINPSYSTWEILTWAYL 417
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 147/314 (46%), Gaps = 38/314 (12%)
Query: 8 PVVLRYLRDKIKPTRGKELVLYNVAMKV---------------FKKCKDFEGAEKLFDEM 52
P+V++ T GKEL ++VA+++ + K +FE A K+FDE
Sbjct: 121 PIVIKAAVQIHDFTLGKEL--HSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDEN 178
Query: 53 LQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENV 112
+RKL N + + R ++ AVE F M G EPD T +V + + ++
Sbjct: 179 PERKLGSWNAIIGGLNHAGR----ANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDL 234
Query: 113 DMAERLYD---RAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTY 169
+A +L+ +AKTE + D + ++LI MYG D +++++M+ + N+ ++
Sbjct: 235 SLAFQLHKCVLQAKTEE-KSDIMMLNSLIDMYGKCGRMDLASHIFEEMR----QRNVVSW 289
Query: 170 NTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMK- 228
++++ L A + +M+ G+ P+ IT+ +L A + G L E+ + MK
Sbjct: 290 SSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKS 349
Query: 229 --ENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFA 286
E G++ C ++ + + G L EA ++ E++ +P+ + L+ F
Sbjct: 350 EFELEPGLSHYGC--IVDLLSRDGQLKEAKKVVEEMP----MKPNVMVWGCLMGGCEKFG 403
Query: 287 KVSEAEAMLNEMIE 300
V AE + M+E
Sbjct: 404 DVEMAEWVAPYMVE 417
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 11/215 (5%)
Query: 94 PDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNV 153
PD + VI A ++ + + + L+ A + D S I +Y +++ V
Sbjct: 115 PDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKV 174
Query: 154 YDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIG 213
+D+ + LG++N ++ + A + A ++ +MKR+G+ PD T ++ + G
Sbjct: 175 FDE----NPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGG 230
Query: 214 GYLREDALGIYREMKENRIGVTVD--LCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPD 271
A +++ + + + D + N L+ M G +D A IFE+++ Q +
Sbjct: 231 LGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMR-----QRN 285
Query: 272 ESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
++SS+I Y+ EA +M E G +PN
Sbjct: 286 VVSWSSMIVGYAANGNTLEALECFRQMREFGVRPN 320
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 129/280 (46%), Gaps = 15/280 (5%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEW 83
++++ +N ++ + D E E++FD+M +R + N R+ +
Sbjct: 119 RDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGS---- 174
Query: 84 FEKMPGFG-CEPDAVTCATVIFAYARVENVDMAERLYDRAKTENW-RLDTVTFSALIKMY 141
F++M G P+ T V+ A A++ D + ++ +T + ++D +ALI MY
Sbjct: 175 FKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMY 234
Query: 142 GMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDY 201
G + + V+ +K + +L ++NT++ + A ++ EMK +GISPD
Sbjct: 235 GKCGAIEIAMEVFKGIK----RRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDK 290
Query: 202 ITYSTLLRAYIGGYLREDALGIYREM-KENRIGVTVDLCNLLLSMCADVGFLDEAVEIFE 260
+T+ +L A L ED L + M + I ++ C ++ + + GFL +AVE
Sbjct: 291 VTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFIN 350
Query: 261 DIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIE 300
+ + D +++L+ + KV E L E+I+
Sbjct: 351 KMP----VKADAVIWATLLGASKVYKKVDIGEVALEELIK 386
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 119/255 (46%), Gaps = 2/255 (0%)
Query: 42 FEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPG-FGCEPDAVTCA 100
FE A+K+FDEM +R K ++F ++N D F+++PG EPD +
Sbjct: 122 FENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYN 181
Query: 101 TVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVL 160
T+I + A L D + + + D +TF+ L+ +++ ++ M
Sbjct: 182 TLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEK 241
Query: 161 GVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDA 220
VK ++ +YN L + K +++++K N + PD T++ +++ ++ ++A
Sbjct: 242 NVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEA 301
Query: 221 LGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLIT 280
+ Y+E+++N + N LL G L+ A E+ ++I + + DE+ ++
Sbjct: 302 ITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLL-VDEAVLQEVVD 360
Query: 281 VYSCFAKVSEAEAML 295
+K EAE ++
Sbjct: 361 ALVKGSKQDEAEEIV 375
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 108/217 (49%), Gaps = 4/217 (1%)
Query: 100 ATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMK- 158
A +I Y RV + A++++D N + ++F+AL+ + +D ++ ++
Sbjct: 110 ARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPG 169
Query: 159 VLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLR-AYIGGYLR 217
L ++P++ +YNTL+ + A + +E++ G+ PD+IT++ LL +Y G
Sbjct: 170 KLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKF- 228
Query: 218 EDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSS 277
E+ I+ M E + + N L A +E V +F+ +K + + +PD TF++
Sbjct: 229 EEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNEL-KPDVFTFTA 287
Query: 278 LITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
+I + K+ EA E+ ++G +P FV L+
Sbjct: 288 MIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLL 324
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 69/151 (45%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
YN +K F A L DE+ + LKPD++TF +++ + + + + +M
Sbjct: 180 YNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMV 239
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
+ D + + A + L+D+ K + D TF+A+IK + D
Sbjct: 240 EKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLD 299
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRA 179
+ + Y +++ G +P +N+LLPA+ +A
Sbjct: 300 EAITWYKEIEKNGCRPLKFVFNSLLPAICKA 330
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 135/290 (46%), Gaps = 14/290 (4%)
Query: 30 NVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPG 89
N + ++ + AE +F M QR D VT+ T+IN C ++A+E F++M
Sbjct: 327 NALVSLYFHLGNLISAEHIFSNMSQR----DAVTYNTLINGLSQCGYGEKAMELFKRMHL 382
Query: 90 FGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQ 149
G EPD+ T A+++ A + + ++L+ + + AL+ +Y D +
Sbjct: 383 DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 442
Query: 150 CLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLR 209
L+ + + +V N+ +N +L A + I+ +M+ I P+ TY ++L+
Sbjct: 443 ALDYFLETEV----ENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 498
Query: 210 AYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQ 269
I E I+ ++ + + +C++L+ M A +G LD A +I I+ +G
Sbjct: 499 TCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL--IRFAG--- 553
Query: 270 PDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK-CYG 318
D +++++I Y+ + +A +M++ G + + +T V C G
Sbjct: 554 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAG 603
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 130/296 (43%), Gaps = 20/296 (6%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEW 83
KEL N+ +VF LF M+ + P+ TF+ ++ R S++ VE
Sbjct: 159 KELASRNLIGEVFG----------LFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQ 208
Query: 84 FEKMPGF-GCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG 142
+ G V C +I Y+R VD+A R++D + + D ++ A+I
Sbjct: 209 IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK----DHSSWVAMISGLS 264
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
E + + ++ DM VLG+ P ++++L A + + + ++ + + G S D
Sbjct: 265 KNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY 324
Query: 203 TYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDI 262
+ L+ Y A I+ M + R VT N L++ + G+ ++A+E+F+ +
Sbjct: 325 VCNALVSLYFHLGNLISAEHIFSNMSQ-RDAVTY---NTLINGLSQCGYGEKAMELFKRM 380
Query: 263 KSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
G+ +PD +T +SL+ S + + + + GF N + L+ Y
Sbjct: 381 HLDGL-EPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYA 435
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/308 (18%), Positives = 132/308 (42%), Gaps = 10/308 (3%)
Query: 51 EMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVE 110
++L R D V++ TMI + D+A+ F +M G D V + A A ++
Sbjct: 546 DILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQ 605
Query: 111 NVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYN 170
+ ++++ +A + D +AL+ +Y ++ ++ + N+ +N
Sbjct: 606 ALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE---AGDNIA-WN 661
Query: 171 TLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKEN 230
L+ ++ A ++ M R GI + T+ + ++A + ++ + +
Sbjct: 662 ALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT 721
Query: 231 RIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSE 290
++CN L+SM A G + +A + F ++ + +E +++++I YS SE
Sbjct: 722 GYDSETEVCNALISMYAKCGSISDAEKQFLEVST-----KNEVSWNAIINAYSKHGFGSE 776
Query: 291 AEAMLNEMIESGFKPN-IFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLL 349
A ++MI S +PN + ++ L C ++G+ P C++
Sbjct: 777 ALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVV 836
Query: 350 NIMTKTPM 357
+++T+ +
Sbjct: 837 DMLTRAGL 844
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 119/301 (39%), Gaps = 40/301 (13%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEW 83
++ V YN + +C E A +LF M L+PD+ T A+++ R +
Sbjct: 352 RDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL 411
Query: 84 FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGM 143
G + ++ YA+ +++ A + + EN V ++ ++ YG+
Sbjct: 412 HAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVEN----VVLWNVMLVAYGL 467
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGIS----- 198
L+D ++ M++ + PN TY ++L R L + I+ ++ +
Sbjct: 468 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 527
Query: 199 --------------------------PDYITYSTLLRAYIGGYLREDALGIYREMKENRI 232
D ++++T++ Y + AL +R+M +
Sbjct: 528 CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR-- 585
Query: 233 GVTVDLCNLL--LSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSE 290
G+ D L +S CA + L E +I SG + D ++L+T+YS K+ E
Sbjct: 586 GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSG-FSSDLPFQNALVTLYSRCGKIEE 644
Query: 291 A 291
+
Sbjct: 645 S 645
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 151/352 (42%), Gaps = 30/352 (8%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQ-RKLKPDNVTFATMINCARLCSMSDRAVE 82
+++V +N + + + FE +K++ ML KP+ VT ++ S +E
Sbjct: 196 RDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLE 255
Query: 83 WFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG 142
+KM + D C VI YA+ ++D A L+D + D+VT+ A+I Y
Sbjct: 256 VHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEK----DSVTYGAIISGYM 311
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
+ + ++ +M+ +G L T+N ++ + + + EM R G P+ +
Sbjct: 312 AHGLVKEAMALFSEMESIG----LSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTV 367
Query: 203 TYSTLL-----RAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVE 257
T S+LL + + G A I R +N I VT ++ A +GFL A
Sbjct: 368 TLSSLLPSLTYSSNLKGGKEIHAFAI-RNGADNNIYVTTS----IIDNYAKLGFLLGAQR 422
Query: 258 IFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+F++ K + ++++IT Y+ A ++ ++M G KP+ +T ++ +
Sbjct: 423 VFDNCKDRSLI-----AWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAF 477
Query: 318 GXXXXXXXXXXXXXRGL-DWGIVPDGHCCCCLLNIMTKTPMEELGKLIDCIE 368
L + I P C+++++++ GKL D +E
Sbjct: 478 AHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRA-----GKLSDAME 524
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 110/265 (41%), Gaps = 54/265 (20%)
Query: 58 KPDNVTFATMINCARLC------SMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVEN 111
+PD+++ + ++ C S++ R V F GF + D +I Y + +N
Sbjct: 126 RPDSISISCVLKALSGCDDFWLGSLA-RQVHGFVIRGGF--DSDVFVGNGMITYYTKCDN 182
Query: 112 VDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLG-VKPNLGTYN 170
++ A +++D E D V+++++I Y ++ C +Y M KPN T
Sbjct: 183 IESARKVFD----EMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVI 238
Query: 171 TLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKEN 230
++ A G S D I L ++++M EN
Sbjct: 239 SVFQAC-------------------GQSSDLIF----------------GLEVHKKMIEN 263
Query: 231 RIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSE 290
I + + LCN ++ A G LD A +F+++ + D T+ ++I+ Y V E
Sbjct: 264 HIQMDLSLCNAVIGFYAKCGSLDYARALFDEMS-----EKDSVTYGAIISGYMAHGLVKE 318
Query: 291 AEAMLNEMIESGFKPNIFVITPLVK 315
A A+ +EM G +I+ L++
Sbjct: 319 AMALFSEMESIGLSTWNAMISGLMQ 343
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 115/262 (43%), Gaps = 20/262 (7%)
Query: 49 FDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYAR 108
F EM++ +P+ VT ++++ S E G + + ++I YA+
Sbjct: 354 FREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAK 413
Query: 109 VENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGT 168
+ + A+R++D K + + ++A+I Y + D D +++D M+ LG KP+ T
Sbjct: 414 LGFLLGAQRVFDNCKDRS----LIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVT 469
Query: 169 YNTLLPAVYRARKPLLAKLIYEEM-KRNGISPDYITYSTLLRAYIGGYLREDALGIYREM 227
+L A + +A+ I++ M + I P Y+ ++ DA+ +M
Sbjct: 470 LTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKM 529
Query: 228 KENRIGVTVDLCNLLLSMCADVGFLDEAV----EIFEDIKSSGIYQPDES-TFSSLITVY 282
+ I + LL+ + +G L+ A +FE +P+ + ++ + +Y
Sbjct: 530 PIDPIA---KVWGALLNGASVLGDLEIARFACDRLFE-------MEPENTGNYTIMANLY 579
Query: 283 SCFAKVSEAEAMLNEMIESGFK 304
+ + EAE + N+M G K
Sbjct: 580 TQAGRWEEAEMVRNKMKRIGLK 601
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 129/311 (41%), Gaps = 35/311 (11%)
Query: 39 CKDFEGAEKL--FDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDA 96
CK+ E L D+ML + LK + V + ++ C M A+E F++ D
Sbjct: 329 CKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDR 388
Query: 97 VTCATVIF-AYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYD 155
V C V F A +++ V+ A L K D + ++ LI Y + L++ D
Sbjct: 389 V-CYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLID 447
Query: 156 DMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGY 215
+M G+ P+L TYN L+ + R IYE MK G P+ +T S ++
Sbjct: 448 EMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFAR 507
Query: 216 LREDALGIYREMK----ENRIGVTVDLC-------------------------NLLLSMC 246
++A + ++ EN+ C L S+C
Sbjct: 508 KVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLC 567
Query: 247 ADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
+ G+L++A ++ + + + + +P S +I + V EA+ + + M+E G P+
Sbjct: 568 IE-GYLEKAHDVLKKMSAYRV-EPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPD 625
Query: 307 IFVITPLVKCY 317
+F T ++ Y
Sbjct: 626 LFTYTIMIHTY 636
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 125/304 (41%), Gaps = 34/304 (11%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEK 86
V YNVA K E A +L EM R + PD + + T+I+ L A++ ++
Sbjct: 389 VCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDE 448
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED 146
M G G PD +T ++ AR + + +Y+R K E + + VT S +I+
Sbjct: 449 MIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARK 508
Query: 147 YDQCLNVYDDM-------KVLGVKP------NLGTYNTLLPAVYRARKPLLAKLIYEEMK 193
+ + + + K VK + Y + Y RK + KL +
Sbjct: 509 VKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFS--- 565
Query: 194 RNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLD 253
I GYL E A + ++M R+ +C ++ + +
Sbjct: 566 ----------------LCIEGYL-EKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVR 608
Query: 254 EAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPL 313
EA +F+ + G+ PD T++ +I Y ++ +AE++ +M + G KP++ T L
Sbjct: 609 EAQVLFDTMVERGLI-PDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVL 667
Query: 314 VKCY 317
+ Y
Sbjct: 668 LDRY 671
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 78 DRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSAL 137
++A + +KM + EP C +I A+ ++ NV A+ L+D D T++ +
Sbjct: 573 EKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIM 632
Query: 138 IKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGI 197
I Y L + + ++++DMK G+KP++ TY LL + +
Sbjct: 633 IHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLK------------------L 674
Query: 198 SPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVE 257
P++ + ++ +G + A + RE IG+ V +L+ + L++A E
Sbjct: 675 DPEHHETCS-VQGEVG---KRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAE 730
Query: 258 IFEDIKSSGIYQPDESTFSSLITVY 282
+F+ + SG+ +PD +++LI+ Y
Sbjct: 731 LFDRMIDSGL-EPDMVAYTTLISSY 754
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 105/213 (49%), Gaps = 9/213 (4%)
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
GFG D C VI Y + N+ A D+ + +++ V S +++ Y ++
Sbjct: 313 GFGL--DVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCL 370
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+ L + + + + + + YN A+ + + A + +EMK GI PD I Y+TL+
Sbjct: 371 EALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLI 430
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDLC--NLLLSMCADVGFLDEAVEIFEDIKSSG 266
Y DAL + EM N G++ DL N+L+S A G +E +EI+E +K+ G
Sbjct: 431 DGYCLQGKVVDALDLIDEMIGN--GMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEG 488
Query: 267 IYQPDESTFSSLITVYSCFA-KVSEAEAMLNEM 298
+P+ T +S+I CFA KV EAE + +
Sbjct: 489 P-KPNAVT-NSVIIEGLCFARKVKEAEDFFSSL 519
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 80/191 (41%), Gaps = 18/191 (9%)
Query: 42 FEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSD--RAVEWFEKMPGFGCEPDAVTC 99
E A + +M +++P MI C +++ A F+ M G PD T
Sbjct: 572 LEKAHDVLKKMSAYRVEPGRSMCGKMIGA--FCKLNNVREAQVLFDTMVERGLIPDLFTY 629
Query: 100 ATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML--EDYDQC------- 150
+I Y R+ + AE L++ K + D VT++ L+ Y L E ++ C
Sbjct: 630 TIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVG 689
Query: 151 ----LNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYST 206
V + G+ ++ Y L+ + A +++ M +G+ PD + Y+T
Sbjct: 690 KRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTT 749
Query: 207 LLRAYI-GGYL 216
L+ +Y GY+
Sbjct: 750 LISSYFRKGYI 760
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 13/130 (10%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMIN--------CARLCSM 76
+L Y + + + + + + AE LF++M QR +KPD VT+ +++ CS+
Sbjct: 625 DLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSV 684
Query: 77 SD-----RAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDT 131
+A E + G D V +I ++ N++ A L+DR D
Sbjct: 685 QGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDM 744
Query: 132 VTFSALIKMY 141
V ++ LI Y
Sbjct: 745 VAYTTLISSY 754
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 124/290 (42%), Gaps = 9/290 (3%)
Query: 23 GKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVE 82
G ++ + N + ++ KC + A +FD M +R D +T+ MIN + A+E
Sbjct: 250 GDKIEVKNALVNMYLKCGRMDEARFVFDRMERR----DVITWTCMINGYTEDGDVENALE 305
Query: 83 WFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG 142
M G P+AVT A+++ V+ + L+ A + D + ++LI MY
Sbjct: 306 LCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYA 365
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
+ D C V+ K + G ++ ++ + A +++ M+R + P+
Sbjct: 366 KCKRVDLCFRVFSGAS----KYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIA 421
Query: 203 TYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDI 262
T ++LL AY A+ I+ + + ++D L+ + + G L+ A +IF I
Sbjct: 422 TLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGI 481
Query: 263 KSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITP 312
+ D + +LI+ Y A + EM+ SG PN T
Sbjct: 482 QEKH-KSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTS 530
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 129/287 (44%), Gaps = 19/287 (6%)
Query: 36 FKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKM--PGFGCE 93
+ C A KLF+EM Q L N+ + + A+ F +M G C
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREG----LYHDAISVFIRMVSEGVKCV 114
Query: 94 PDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNV 153
PD T V A ++++ + ++ R + D +AL+ MY + +V
Sbjct: 115 PDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDV 174
Query: 154 YDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIG 213
+D MK ++ ++NT++ YR A ++++ M + D+ T ++L +
Sbjct: 175 FDVMK----NRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLP--VC 228
Query: 214 GYLREDALG--IYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPD 271
G+L++ +G +++ ++E R+G +++ N L++M G +DEA +F+ ++ + D
Sbjct: 229 GHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME-----RRD 283
Query: 272 ESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
T++ +I Y+ V A + M G +PN I LV G
Sbjct: 284 VITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCG 330
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/305 (19%), Positives = 131/305 (42%), Gaps = 13/305 (4%)
Query: 15 RDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMIN-CARL 73
RD + ++++ +N + + + A +FD M+ + D+ T +M+ C L
Sbjct: 172 RDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHL 231
Query: 74 CSMS-DRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTV 132
+ R V + G + + ++ Y + +D A ++DR + R D +
Sbjct: 232 KDLEMGRNVHKLVEEKRLGDKIEVKN--ALVNMYLKCGRMDEARFVFDRME----RRDVI 285
Query: 133 TFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEM 192
T++ +I Y D + L + M+ GV+PN T +L+ A K K ++
Sbjct: 286 TWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWA 345
Query: 193 KRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFL 252
R + D I ++L+ Y + ++ + G + +++ C +
Sbjct: 346 VRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGP----WSAIIAGCVQNELV 401
Query: 253 DEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITP 312
+A+ +F+ ++ + +P+ +T +SL+ Y+ A + +A + + ++GF ++ T
Sbjct: 402 SDALGLFKRMRREDV-EPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATG 460
Query: 313 LVKCY 317
LV Y
Sbjct: 461 LVHVY 465
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 118/287 (41%), Gaps = 57/287 (19%)
Query: 38 KCKDFEGAEKLFDEMLQ--RKLKPDNVTFATMINCARLC----SMSDRAVEWFEKMPGFG 91
K DF+G L+D + Q R+ NV I C C A+ F +M +
Sbjct: 139 KGNDFKG---LWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYH 195
Query: 92 CEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRL--DTVTFSALIK---MYGMLED 146
C+PD T+I A RV N A L D+ + +R DT T++ LI YGM
Sbjct: 196 CKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTG 255
Query: 147 YDQCLN--------VYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGIS 198
+ + ++ +M G P++ TYN L+ + + A ++E+MK G
Sbjct: 256 CRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCV 315
Query: 199 PDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEI 258
P+ +TY++ +R Y VT + ++ A+E+
Sbjct: 316 PNQVTYNSFIRYY---------------------SVTNE--------------IEGAIEM 340
Query: 259 FEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKP 305
+K G P ST++ LI + +EA ++ EM+E+G P
Sbjct: 341 MRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVP 387
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 138/318 (43%), Gaps = 51/318 (16%)
Query: 43 EGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSD-RAVEWF-EKMPGFGCEPDAVTCA 100
E +++ M + + P+ TF + N C+ S+ R V+ F EKM G EPD VT
Sbjct: 218 EDCWQVYSVMCRVGIHPNTYTFNILTNV--FCNDSNFREVDDFLEKMEEEGFEPDLVTYN 275
Query: 101 TVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED--YDQCLNVYDDMK 158
T++ +Y R + A LY D VT+++LIK G+ +D + + M
Sbjct: 276 TLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIK--GLCKDGRVREAHQTFHRMV 333
Query: 159 VLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLRE 218
G+KP+ +YNTL+ A + +K + EM N + PD T + + G++RE
Sbjct: 334 DRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFT----CKVIVEGFVRE 389
Query: 219 ----DALGIYREMKENRIGVTVDLCN-LLLSMC------ADVGFLDEAVE---------- 257
A+ E++ ++ + ++C+ L++S+C A LD +E
Sbjct: 390 GRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPET 449
Query: 258 ---IFEDIKSSGIYQP---------------DESTFSSLITVYSCFAKVSEAEAMLNEMI 299
+ E + + D T+ +LI + EAE+++ EM
Sbjct: 450 YNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMF 509
Query: 300 ESGFKPNIFVITPLVKCY 317
+S KP+ F+ LV Y
Sbjct: 510 DSEVKPDSFICGALVYGY 527
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 104/225 (46%), Gaps = 3/225 (1%)
Query: 92 CEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCL 151
C D V ++ Y ++ V+ R++ + + VT + L+ L+ + C
Sbjct: 162 CNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCW 221
Query: 152 NVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAY 211
VY M +G+ PN T+N L E+M+ G PD +TY+TL+ +Y
Sbjct: 222 QVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSY 281
Query: 212 IGGYLREDALGIYREMKENRIGVT-VDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQP 270
++A +Y+ M R+ V +L+ +C D G + EA + F + GI +P
Sbjct: 282 CRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKD-GRVREAHQTFHRMVDRGI-KP 339
Query: 271 DESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
D ++++LI Y + +++ +L+EM+ + P+ F +V+
Sbjct: 340 DCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVE 384
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 19/176 (10%)
Query: 160 LGVKPNLGTYNTLLPAVYRARK-PL----LAKLIYEEMKRNGISP-------------DY 201
LG +PN+G Y LL + ++K PL L +LI K+ + D
Sbjct: 107 LGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDP 166
Query: 202 ITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFED 261
+ + L++ Y+ L E+ ++RE+ ++ V+V CN LL+ + +++ +++
Sbjct: 167 VVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSV 226
Query: 262 IKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ GI+ P+ TF+ L V+ + E + L +M E GF+P++ LV Y
Sbjct: 227 MCRVGIH-PNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSY 281
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 13/286 (4%)
Query: 35 VFKKCKDFEGAEKLFDEMLQR-KLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCE 93
VF++ F+ +L DEM L PD+ F T+I + R + + + FG +
Sbjct: 88 VFRR---FDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIK 144
Query: 94 PDAVTCATVIFAYARVENVDMAERLYDRA-KTENWRLDTVTFSALIKMYGMLEDYDQCLN 152
P +++ + E++D+A + R D T+ L+K +
Sbjct: 145 PSLKVFNSILDVLVK-EDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFK 203
Query: 153 VYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYI 212
+ MK GV PN YNTLL A+ + K A+ + EMK P+ +T++ L+ AY
Sbjct: 204 LLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYC 259
Query: 213 G-GYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPD 271
L + + + + + V + ++ +C + G + EA+E+ E ++S G + D
Sbjct: 260 NEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNE-GRVSEALEVLERVESKG-GKVD 317
Query: 272 ESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
++L+ Y K+ A+ EM G+ PN+ L+ Y
Sbjct: 318 VVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGY 363
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 107/256 (41%), Gaps = 10/256 (3%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
Y + MK KL M + P+ V + T+++ RA +M
Sbjct: 185 YGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK 244
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
EP+ VT +I AY + + + L ++ + + D VT + ++++
Sbjct: 245 ----EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVS 300
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
+ L V + ++ G K ++ NTL+ K +A+ + EM+R G P+ TY+ L+
Sbjct: 301 EALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLI 360
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIY 268
Y + + AL + +MK + I N L+ + G D+ ++I E +
Sbjct: 361 AGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILE------MM 414
Query: 269 QPDESTFSSLITVYSC 284
Q ++ + I Y+C
Sbjct: 415 QDSDTVHGARIDPYNC 430
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 124/295 (42%), Gaps = 11/295 (3%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
Y + + K D + A + D M + L+P ++++I A E F KM
Sbjct: 550 YLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKML 609
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMY---GMLE 145
G +PD + +I YAR +D A L + R + T++ LI + GM+E
Sbjct: 610 ESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMME 669
Query: 146 DYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
Q L D M G+ PN+ Y L+ + + ++ M N I D+I Y
Sbjct: 670 KGCQYL---DKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYI 726
Query: 206 TLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDE---AVEIFEDI 262
TLL R+ + E + ++ + L+S+ + +G A+E+ +
Sbjct: 727 TLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKV 786
Query: 263 KSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
K S I P+ +++IT Y ++ EA L M + G PN+ T L+K +
Sbjct: 787 KKSII--PNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSH 839
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 111/272 (40%), Gaps = 40/272 (14%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSD--RAVEWFEKMPGFGCEPDAVTCATV 102
E L E+ ++ V A + LCS + A+ EKM GC P + +V
Sbjct: 461 VESLLGEIARKDANLAAVGLAVVTTA--LCSQRNYIAALSRIEKMVNLGCTPLPFSYNSV 518
Query: 103 IFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGV 162
I + ++ L + + ++ D T+ ++ D D + D M+ LG+
Sbjct: 519 IKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGL 578
Query: 163 KPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALG 222
+P + Y++++ ++ + + + A+ + +M +GI PD I Y ++ Y
Sbjct: 579 RPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTY----------- 627
Query: 223 IYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVY 282
A G +DEA E+ E++ +P T++ LI+ +
Sbjct: 628 ------------------------ARNGRIDEANELVEEVVKH-FLRPSSFTYTVLISGF 662
Query: 283 SCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
+ + L++M+E G PN+ + T L+
Sbjct: 663 VKMGMMEKGCQYLDKMLEDGLSPNVVLYTALI 694
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 160/390 (41%), Gaps = 46/390 (11%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEK 86
V+Y MK + K + A +L+ M++R + D F T+I+ M D+ F +
Sbjct: 273 VMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQ 332
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLY-DRAKTENWRLDTVTFSALI----KMY 141
M G + + T +I +Y + NVD A RL+ + +E+ + ++ LI K
Sbjct: 333 MIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKG 392
Query: 142 GMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRN--GISP 199
GM + D + + D+ G+ P+ TY LL + + + A +I + + N GI+P
Sbjct: 393 GMDKAVDLLMRMLDN----GIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINP 448
Query: 200 DYI----TYSTLLRAYIGGYLREDA------LGIYREM---KENRIGVTVDLCNLLLSMC 246
I + + +G R+DA L + + N I + ++ C
Sbjct: 449 PVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGC 508
Query: 247 ADVGFLDEAV-------EIFEDIKS-SGIYQ-----PDESTFSSLITVYSCFAKVSEAEA 293
+ F +V I ED+ S I Q PD T+ ++ A A
Sbjct: 509 TPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFA 568
Query: 294 MLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMT 353
+++ M E G +P + + + ++ G + L+ GI PD ++N
Sbjct: 569 IIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYA 628
Query: 354 KTPMEELGKLIDCIEKANEELGSVVRYLVE 383
+ G+ I++ANE + VV++ +
Sbjct: 629 RN-----GR----IDEANELVEEVVKHFLR 649
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/351 (18%), Positives = 134/351 (38%), Gaps = 84/351 (23%)
Query: 5 ETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTF 64
E + L I+P + Y + + + + + A +L +E+++ L+P + T+
Sbjct: 600 EAEETFAKMLESGIQPDE----IAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTY 655
Query: 65 ATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKT 124
+I+ M ++ ++ +KM G P+ V +I + + + + L+
Sbjct: 656 TVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGE 715
Query: 125 ENWRLDTVTFSALIKMYGM------------------------------LEDYDQCLNVY 154
+ + D + + L+ G+ L L Y
Sbjct: 716 NDIKHDHIAYITLLS--GLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNY 773
Query: 155 DD----MKVLG-----VKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
M+V+G + PNL +NT++ A + A E M++ GI P+ +TY+
Sbjct: 774 GSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYT 833
Query: 206 TLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSS 265
L++++I + G ++ A+++FE
Sbjct: 834 ILMKSHI-----------------------------------EAGDIESAIDLFEGTNC- 857
Query: 266 GIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKC 316
+PD+ +S+L+ F + +A A++ EM +SG PN L++C
Sbjct: 858 ---EPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQC 905
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 132/290 (45%), Gaps = 14/290 (4%)
Query: 18 IKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMS 77
+K G+ + N + + K + + A K+FDEM +R D +++ ++IN ++
Sbjct: 222 LKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER----DVISWNSIINGYVSNGLA 277
Query: 78 DRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSAL 137
++ + F +M G E D T +V A + + ++ + + + L
Sbjct: 278 EKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTL 337
Query: 138 IKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGI 197
+ MY D D V+ +M ++ +Y +++ R A ++EEM+ GI
Sbjct: 338 LDMYSKCGDLDSAKAVFREMS----DRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Query: 198 SPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVE 257
SPD T + +L L ++ ++ +KEN +G + + N L+ M A G + EA
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 453
Query: 258 IFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESG-FKPN 306
+F +++ I +++++I YS +EA ++ N ++E F P+
Sbjct: 454 VFSEMRVKDII-----SWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPD 498
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 128/295 (43%), Gaps = 54/295 (18%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEK 86
+ +N+ M K DF G+ LF +M+ ++ D+ TF+ C S R+V E+
Sbjct: 161 LFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFS----CVSKSFSSLRSVHGGEQ 216
Query: 87 MPGFGC-----EPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMY 141
+ GF E ++V + V F Y + + VD A +++D E D ++++++I Y
Sbjct: 217 LHGFILKSGFGERNSVGNSLVAF-YLKNQRVDSARKVFD----EMTERDVISWNSIINGY 271
Query: 142 GMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDY 201
++ L+V+ M V G++ +L T ++ +R L + +
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAV------------- 318
Query: 202 ITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFED 261
+S ++A + RED CN LL M + G LD A +F +
Sbjct: 319 --HSIGVKAC---FSREDR-----------------FCNTLLDMYSKCGDLDSAKAVFRE 356
Query: 262 IKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKC 316
+ + +++S+I Y+ EA + EM E G P+++ +T ++ C
Sbjct: 357 MSDRSVV-----SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNC 406
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 112/241 (46%), Gaps = 12/241 (4%)
Query: 78 DRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSAL 137
D A + F+KMP E D T T+I AY+ + AE+L+ +N T++++AL
Sbjct: 45 DEARQMFDKMP----ERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKN----TISWNAL 96
Query: 138 IKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGI 197
I Y + N++ +M+ G+KPN T ++L L + I+ + G
Sbjct: 97 ISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGF 156
Query: 198 SPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVE 257
D + LL Y +A ++ M+ + VT +L+ + GF +A+E
Sbjct: 157 DLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVT---WTSMLTGYSQNGFAFKAIE 213
Query: 258 IFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
F D++ G Q ++ TF S++T + + + +++SGFK NI+V + L+ Y
Sbjct: 214 CFRDLRREG-NQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMY 272
Query: 318 G 318
Sbjct: 273 A 273
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/286 (19%), Positives = 122/286 (42%), Gaps = 13/286 (4%)
Query: 30 NVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPG 89
N + ++ +CK AE LF+ M K +NVT+ +M+ + +A+E F +
Sbjct: 164 NGLLAMYAQCKRISEAEYLFETMEGEK---NNVTWTSMLTGYSQNGFAFKAIECFRDLRR 220
Query: 90 FGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQ 149
G + + T +V+ A A V + +++ ++ + SALI MY + +
Sbjct: 221 EGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMES 280
Query: 150 CLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLR 209
+ + M+V ++ ++N+++ R A ++ M + D T ++L
Sbjct: 281 ARALLEGMEV----DDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILN 336
Query: 210 AY-IGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIY 268
+ + + A + + + + N L+ M A G +D A+++FE G+
Sbjct: 337 CFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFE-----GMI 391
Query: 269 QPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
+ D ++++L+T + EA + M G P+ V ++
Sbjct: 392 EKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVL 437
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 135/293 (46%), Gaps = 9/293 (3%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEML-QRKLKPDNVTFATMINCARLCSMSDRAVEWFEKM 87
+N + + K +FE + L + M+ + P++VTF + + A++ ++K+
Sbjct: 84 FNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKL 143
Query: 88 PGFGCEPDAVTCATVIFAYARVENVDMAERL-YDRAKTENW--RLDTVTFSALIKMYGML 144
F D + ++ A ++V AE L + + N +T + +++ + L
Sbjct: 144 DDFNLR-DETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKL 202
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
+ +C + M GV +L +Y+ + + ++ KP A +Y+EMK + D + Y
Sbjct: 203 GWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAY 262
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
+T++RA E + ++REM+E V N ++ + + G + +A + +++
Sbjct: 263 NTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPK 322
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
G QPD T+ L +S K SE ++ MI SG +P + L++ +
Sbjct: 323 RGC-QPDSITYMCL---FSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKF 371
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 11/211 (5%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEW 83
K+L Y++ M + K A KL+ EM R++K D V + T+I + +
Sbjct: 222 KDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRV 281
Query: 84 FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGM 143
F +M GCEP+ T T+I + A R+ D + D++T+ L +
Sbjct: 282 FREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCL---FSR 338
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRAR--KPLLAKLIYEEMKRNGISPDY 201
LE + L+++ M GV+P + TY L+ R +P+L +++ MK +G +PD
Sbjct: 339 LEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVL--YVWKTMKESGDTPDS 396
Query: 202 ITYSTLLRAYIGGYLREDALGIYREMKENRI 232
Y+ ++ A I ++ L + RE +E I
Sbjct: 397 AAYNAVIDALI----QKGMLDMAREYEEEMI 423
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 101/224 (45%), Gaps = 4/224 (1%)
Query: 82 EWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMY 141
E+++KM G D + + + + A +LY K+ +LD V ++ +I+
Sbjct: 210 EYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAI 269
Query: 142 GMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDY 201
G + + + V+ +M+ G +PN+ T+NT++ + + A + +EM + G PD
Sbjct: 270 GASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDS 329
Query: 202 ITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFED 261
ITY L + L ++ M + + +D +L+ GFL + +++
Sbjct: 330 ITYMCLFSRLEKP---SEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKT 386
Query: 262 IKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKP 305
+K SG PD + ++++I + A EMIE G P
Sbjct: 387 MKESGD-TPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 135/308 (43%), Gaps = 15/308 (4%)
Query: 11 LRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINC 70
+ Y R + ++V++N + + + + LF E+L+ + PDN TF +++
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 71 ARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLD 130
+ + + G + + C T+I Y E+VD A ++DR
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPC---- 194
Query: 131 TVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYE 190
V ++A+I Y ++ L+++ +M+ +KPN T ++L + L K I++
Sbjct: 195 VVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHK 254
Query: 191 EMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVG 250
K++ + L+ + +DA+ I+ +M+ + ++ A+ G
Sbjct: 255 YAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK----DTQAWSAMIVAYANHG 310
Query: 251 FLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVI 310
++++ +FE ++S + QPDE TF L+ S +V E ++M+ F I
Sbjct: 311 KAEKSMLMFERMRSENV-QPDEITFLGLLNACSHTGRVEEGRKYFSQMVSK------FGI 363
Query: 311 TPLVKCYG 318
P +K YG
Sbjct: 364 VPSIKHYG 371
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 134/311 (43%), Gaps = 31/311 (9%)
Query: 23 GKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRA-V 81
G + +NV ++ + K K E A ++ +M + ++PD VT+ T+ C + RA
Sbjct: 185 GPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAES 244
Query: 82 EWFEKMP-GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKM 140
E EKM +P+ TC V+ Y R V R R K + V F++LI
Sbjct: 245 EVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLING 304
Query: 141 YGMLEDYDQC-------------------------LNVYDDMKVLGVKPNLGTYNTLLPA 175
+ + D D + V MK VK ++ TY+T++ A
Sbjct: 305 FVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNA 364
Query: 176 VYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREM-KENRIGV 234
A A +++EM + G+ PD YS L + Y+ + A + + E+R V
Sbjct: 365 WSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNV 424
Query: 235 TVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAM 294
+ ++ C++ G +D+A+ +F + G+ P+ TF +L+ Y + +AE +
Sbjct: 425 VI-FTTVISGWCSN-GSMDDAMRVFNKMCKFGV-SPNIKTFETLMWGYLEVKQPWKAEEV 481
Query: 295 LNEMIESGFKP 305
L M G KP
Sbjct: 482 LQMMRGCGVKP 492
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 136/338 (40%), Gaps = 66/338 (19%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIF 104
A+ +F + + +P +++ T++ + ++ G + D++ VI
Sbjct: 64 AQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVIN 123
Query: 105 AYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLG--- 161
A++ N++ A + + K T T++ LIK YG+ ++ + D M G
Sbjct: 124 AFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVD 183
Query: 162 VKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYI--------- 212
V PN+ T+N L+ A + +K A + ++M+ G+ PD +TY+T+ Y+
Sbjct: 184 VGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAE 243
Query: 213 ------------------------GGYLRE----DALGIYREMKENRIGVT--------- 235
GGY RE D L R MKE R+
Sbjct: 244 SEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLIN 303
Query: 236 -------------VDLCNLLLSMCADV---GFLDEAVEIFEDIKSSGIYQPDESTFSSLI 279
V L LL+S +V G V++ +K + + D T+S+++
Sbjct: 304 GFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNV-KADVITYSTVM 362
Query: 280 TVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+S + +A + EM+++G KP+ + L K Y
Sbjct: 363 NAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGY 400
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 77/155 (49%), Gaps = 1/155 (0%)
Query: 57 LKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAE 116
+K D +T++T++N ++A + F++M G +PDA + + Y R + AE
Sbjct: 351 VKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAE 410
Query: 117 RLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAV 176
L + E+ R + V F+ +I + D + V++ M GV PN+ T+ TL+
Sbjct: 411 ELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGY 469
Query: 177 YRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAY 211
++P A+ + + M+ G+ P+ T+ L A+
Sbjct: 470 LEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAW 504
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 93/213 (43%), Gaps = 16/213 (7%)
Query: 95 DAVTCATVIFAYAR----VENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQC 150
D VT ++ ++ V N M ++ K N + D +T+S ++ + ++
Sbjct: 315 DEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKA 374
Query: 151 LNVYDDMKVLGVKPNLGTYNTLLPAVYRARKP-----LLAKLIYEEMKRNGISPDYITYS 205
V+ +M GVKP+ Y+ L RA++P LL LI E P+ + ++
Sbjct: 375 AQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES------RPNVVIFT 428
Query: 206 TLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSS 265
T++ + +DA+ ++ +M + + + L+ +V +A E+ + ++
Sbjct: 429 TVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGC 488
Query: 266 GIYQPDESTFSSLITVYSCFAKVSEAEAMLNEM 298
G+ +P+ STF L + E+ +N +
Sbjct: 489 GV-KPENSTFLLLAEAWRVAGLTDESNKAINAL 520
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 122/273 (44%), Gaps = 13/273 (4%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEK 86
V+YNV +K++ + F+ A K+FD M +R + N + + R+ M + + E+
Sbjct: 272 VVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEE 331
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED 146
M GF T T++ A +RV + + ++ + + D ++L+ MYG +
Sbjct: 332 MIGFSW----ATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGE 387
Query: 147 YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYST 206
+ V+D M + +L ++N +L ++E M +G++PD IT+
Sbjct: 388 VEYSRRVFDVM----LTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVA 443
Query: 207 LLRAYIGGYLREDALGIYREMK-ENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSS 265
LL L E L ++ MK E R+ ++ L+ + G + EAV++ E +
Sbjct: 444 LLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMP-- 501
Query: 266 GIYQPDESTFSSLITVYSCFAKVSEAEAMLNEM 298
++P S + SL+ VS E E+
Sbjct: 502 --FKPSASIWGSLLNSCRLHGNVSVGEIAAKEL 532
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/282 (19%), Positives = 126/282 (44%), Gaps = 10/282 (3%)
Query: 33 MKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGC 92
+ +F C+ + A K+FD++ L + V A I +R S D + + + + F
Sbjct: 174 ITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSF-I 232
Query: 93 EPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLN 152
EP + + + A ++++ + ++ + ++D V ++ L+K+Y +D
Sbjct: 233 EPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARK 292
Query: 153 VYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYI 212
V+D M + N+ T+N+L+ + + + ++ +M+ I + T +T+L A
Sbjct: 293 VFDGMS----ERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACS 348
Query: 213 GGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDE 272
I+ ++ +++ V L N L+ M G ++ + +F+ + + D
Sbjct: 349 RVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTK-----DL 403
Query: 273 STFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
++++ ++ Y+ + E + MIESG P+ L+
Sbjct: 404 ASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALL 445
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 135/299 (45%), Gaps = 17/299 (5%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQR-KLKPDNVTFATMINCARLCSMSD--RA 80
++++ ++V ++ + + K+ KLF EM+ K +PD VT +++ + D R+
Sbjct: 188 RDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRS 247
Query: 81 VEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKM 140
V F GF D C ++I Y++ +VD A R++D N V++++++
Sbjct: 248 VHGFSIRRGFDL-ADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRN----IVSWNSILAG 302
Query: 141 YGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPD 200
+ + YD+ L ++ M V+ + T +LL +PL K I+ + R G +
Sbjct: 303 FVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESN 362
Query: 201 YITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFE 260
+ S+L+ AY L +DA + M V C+ ++S A G DEA+ IF
Sbjct: 363 EVALSSLIDAYTSCSLVDDAGTVLDSMTYK----DVVSCSTMISGLAHAGRSDEAISIFC 418
Query: 261 DIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN-IFVITPLVKCYG 318
++ + P+ T SL+ S A + ++ I N I V T +V Y
Sbjct: 419 HMRDT----PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYA 473
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 118/272 (43%), Gaps = 21/272 (7%)
Query: 33 MKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGC 92
+ + C + A + D M + D V+ +TMI+ SD A+ F M
Sbjct: 370 IDAYTSCSLVDDAGTVLDSMTYK----DVVSCSTMISGLAHAGRSDEAISIFCHMRD--- 422
Query: 93 EPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTF-SALIKMYGMLEDYDQCL 151
P+A+T +++ A + ++ ++ + A + ++ ++ ++++ Y +
Sbjct: 423 TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMAR 482
Query: 152 NVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAY 211
+D + + N+ ++ ++ A P A +++EMK+ G +P+ +TY L A
Sbjct: 483 RTFDQI----TEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSAC 538
Query: 212 IGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIF----EDIKS--- 264
G L + L I++ M E ++ + ++ M + G +D AVE+ ED+K+
Sbjct: 539 NHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGAS 598
Query: 265 --SGIYQPDESTFSSLITVYSCFAKVSEAEAM 294
I + F LI A+V E E +
Sbjct: 599 AWGAILSGCRNRFKKLIITSEVVAEVLELEPL 630
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 123/279 (44%), Gaps = 12/279 (4%)
Query: 43 EGAEKLFDEMLQRKLKPDNVTFATM-INCARLCSMSDRAVEWFEKMPGFGCEPDAVTCAT 101
E AE +FDEM R + PD+ ++ M I C R + + A W M G PD TC
Sbjct: 199 EYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQE-ADRWLTGMIQRGFIPDNATCTL 257
Query: 102 VIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLG 161
++ A V+ A + + ++ + + F++LI Q + ++M G
Sbjct: 258 ILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 317
Query: 162 VKPNLGTYNTLLPAV-YRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDA 220
KPN+ T+ L+ + R +L + ++ + P+ TY+++ IGGY +ED
Sbjct: 318 WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSM----IGGYCKEDK 373
Query: 221 LG----IYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFS 276
L ++ MKE + V+ L++ G A E+ + G + P+ T++
Sbjct: 374 LNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEG-FMPNIYTYN 432
Query: 277 SLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
+ I ++ EA +LN+ G + + T L++
Sbjct: 433 AAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQ 471
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 126/280 (45%), Gaps = 14/280 (5%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIF 104
A++ M+QR PDN T ++ + +RA+ +F KM G +P+ + ++I
Sbjct: 236 ADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLID 295
Query: 105 AYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDM-KVLGVK 163
+ ++ A + + W+ + T +ALI ++ ++ + + K
Sbjct: 296 GLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYK 355
Query: 164 PNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGI 223
PN+ TY +++ + K A++++ MK G+ P+ TY+TL I G+ + + G
Sbjct: 356 PNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTL----INGHCKAGSFGR 411
Query: 224 YREMKENRIGVTVDLCNL------LLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSS 277
E+ N +G + N+ + S+C EA E+ S G+ + D T++
Sbjct: 412 AYELM-NLMGDEGFMPNIYTYNAAIDSLCKK-SRAPEAYELLNKAFSCGL-EADGVTYTI 468
Query: 278 LITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
LI +++A A M ++GF+ ++ + L+ +
Sbjct: 469 LIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAF 508
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 143/374 (38%), Gaps = 48/374 (12%)
Query: 51 EMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVE 110
+M + L P ++T ++ A + + A F++M G PD+ + ++ R
Sbjct: 172 DMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDG 231
Query: 111 NVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYN 170
+ A+R + D T + ++ ++ + + M LG KPNL +
Sbjct: 232 KIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFT 291
Query: 171 TLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKEN 230
+L+ + + A + EEM RNG P+ T++ L+
Sbjct: 292 SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG-------------------- 331
Query: 231 RIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSE 290
LC G+ ++A +F + S Y+P+ T++S+I Y K++
Sbjct: 332 -------LCKR--------GWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNR 376
Query: 291 AEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLN 350
AE + + M E G PN+ T L+ + D G +P+ + ++
Sbjct: 377 AEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAID 436
Query: 351 IMTKT-----PMEELGKLIDCIEKANEELGSVVRYLVEGQEEGDQDFIKETSAL---LNS 402
+ K E L K C +A+ V Y + QE+ Q+ I + A +N
Sbjct: 437 SLCKKSRAPEAYELLNKAFSCGLEADG-----VTYTILIQEQCKQNDINQALAFFCRMNK 491
Query: 403 TDAEIKKPLCNCLI 416
T E L N LI
Sbjct: 492 TGFEADMRLNNILI 505
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 105/261 (40%), Gaps = 36/261 (13%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIF 104
AE LF M ++ L P+ T+ T+IN RA E M G P+ T I
Sbjct: 377 AEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAID 436
Query: 105 AYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKP 164
+ + A L ++A + D VT++ LI+ D +Q L + M G +
Sbjct: 437 SLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEA 496
Query: 165 NLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIY 224
++ N L+ A R +K ++ +++ + G+ P TY++++ Y
Sbjct: 497 DMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCY------------- 543
Query: 225 REMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSC 284
C + G +D A++ F ++K G PD T+ SLI+
Sbjct: 544 ---------------------CKE-GDIDLALKYFHNMKRHGCV-PDSFTYGSLISGLCK 580
Query: 285 FAKVSEAEAMLNEMIESGFKP 305
+ V EA + MI+ G P
Sbjct: 581 KSMVDEACKLYEAMIDRGLSP 601
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 4/185 (2%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSD--RAVEWFEK 86
YN A+ K A +L ++ L+ D VT+ +I C +D +A+ +F +
Sbjct: 431 YNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQ--EQCKQNDINQALAFFCR 488
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED 146
M G E D +I A+ R + + +ERL+ + T++++I Y D
Sbjct: 489 MNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGD 548
Query: 147 YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYST 206
D L + +MK G P+ TY +L+ + + A +YE M G+SP +T T
Sbjct: 549 IDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVT 608
Query: 207 LLRAY 211
L Y
Sbjct: 609 LAYEY 613
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 86/179 (48%), Gaps = 3/179 (1%)
Query: 137 LIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNG 196
+++ + + ++ + + DM+ G+ P+ T N +L A+ +++EM G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 197 ISPDYITYSTL-LRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEA 255
+ PD +Y + + + G ++E + ++ I C L+L+ + G ++ A
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNAT-CTLILTALCENGLVNRA 271
Query: 256 VEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
+ F + G ++P+ F+SLI + +A ML EM+ +G+KPN++ T L+
Sbjct: 272 IWYFRKMIDLG-FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALI 329
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 82/186 (44%), Gaps = 3/186 (1%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++ L N+ + F + K + +E+LF ++ L P T+ +MI+C D A+++F
Sbjct: 497 DMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYF 556
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
M GC PD+ T ++I + VD A +LY+ VT L Y
Sbjct: 557 HNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKR 616
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
D + + ++ L K + T TL+ + +K +A L ++++ S D +T
Sbjct: 617 NDSANAMIL---LEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTL 673
Query: 205 STLLRA 210
+ A
Sbjct: 674 AAFTTA 679
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 135/295 (45%), Gaps = 17/295 (5%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMIN-CARLCSMS-DRAVEWFEK 86
+NV + + + K F+ + ++ M+ + ++ D T+ ++I CA L + R V +
Sbjct: 152 WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIE 211
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED 146
+ C + C +I Y R VD+A RL+DR D V+++A+I Y E
Sbjct: 212 VSSHRC--NLYVCNALISMYKRFGKVDVARRLFDRMSER----DAVSWNAIINCYTSEEK 265
Query: 147 YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYST 206
+ + D M + GV+ ++ T+NT+ A + A M+ + +
Sbjct: 266 LGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMIN 325
Query: 207 LLRA--YIGGYLREDALGIYREMKENRIGVTVD-LCNLLLSMCADVGFLDEAVEIFEDIK 263
L+A +IG L+ + ++ +D + N L++M + L A +F+ ++
Sbjct: 326 GLKACSHIGA-LKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVE 384
Query: 264 SSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
++ + ST++S+I+ ++ + E +L EM+ SGF PN + ++ +
Sbjct: 385 ANSL-----STWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFA 434
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 121/253 (47%), Gaps = 16/253 (6%)
Query: 30 NVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPG 89
N + ++ +C D A +F ++ L T+ ++I+ S+ ++M
Sbjct: 361 NSLITMYSRCSDLRHAFIVFQQVEANSLS----TWNSIISGFAYNERSEETSFLLKEMLL 416
Query: 90 FGCEPDAVTCATVIFAYARVENVDMAERLYDRA-KTENWRLDTVTFSALIKMYGMLEDYD 148
G P+ +T A+++ +ARV N+ + + + ++++ + +++L+ MY +
Sbjct: 417 SGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEII 476
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
V+D M+ K + TY +L+ R K +A +++M R+GI PD++T +L
Sbjct: 477 AAKRVFDSMR----KRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVL 532
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDL--CNLLLSMCADVGFLDEAVEIFEDIKSSG 266
A L + ++ +M E+ G+ + L + ++ + G+LD+A +IF I
Sbjct: 533 SACSHSNLVREGHWLFTKM-EHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIP--- 588
Query: 267 IYQPDESTFSSLI 279
Y+P + ++L+
Sbjct: 589 -YEPSSAMCATLL 600
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 91/195 (46%), Gaps = 13/195 (6%)
Query: 115 AERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLP 174
++L+ + D+V L+ Y D+ + ++ ++L P +N L+
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLP----WNVLIG 157
Query: 175 AVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALG--IYREMKENRI 232
+ R ++ + +Y+ M GI D TY ++++A L + A G ++ ++ +
Sbjct: 158 SYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAA--LLDFAYGRVVHGSIEVSSH 215
Query: 233 GVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAE 292
+ +CN L+SM G +D A +F+ + + D +++++I Y+ K+ EA
Sbjct: 216 RCNLYVCNALISMYKRFGKVDVARRLFDRMS-----ERDAVSWNAIINCYTSEEKLGEAF 270
Query: 293 AMLNEMIESGFKPNI 307
+L+ M SG + +I
Sbjct: 271 KLLDRMYLSGVEASI 285
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 135/295 (45%), Gaps = 17/295 (5%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMIN-CARLCSMS-DRAVEWFEK 86
+NV + + + K F+ + ++ M+ + ++ D T+ ++I CA L + R V +
Sbjct: 152 WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIE 211
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED 146
+ C + C +I Y R VD+A RL+DR D V+++A+I Y E
Sbjct: 212 VSSHRC--NLYVCNALISMYKRFGKVDVARRLFDRMSER----DAVSWNAIINCYTSEEK 265
Query: 147 YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYST 206
+ + D M + GV+ ++ T+NT+ A + A M+ + +
Sbjct: 266 LGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMIN 325
Query: 207 LLRA--YIGGYLREDALGIYREMKENRIGVTVD-LCNLLLSMCADVGFLDEAVEIFEDIK 263
L+A +IG L+ + ++ +D + N L++M + L A +F+ ++
Sbjct: 326 GLKACSHIGA-LKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVE 384
Query: 264 SSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
++ + ST++S+I+ ++ + E +L EM+ SGF PN + ++ +
Sbjct: 385 ANSL-----STWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFA 434
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 121/253 (47%), Gaps = 16/253 (6%)
Query: 30 NVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPG 89
N + ++ +C D A +F ++ L T+ ++I+ S+ ++M
Sbjct: 361 NSLITMYSRCSDLRHAFIVFQQVEANSLS----TWNSIISGFAYNERSEETSFLLKEMLL 416
Query: 90 FGCEPDAVTCATVIFAYARVENVDMAERLYDRA-KTENWRLDTVTFSALIKMYGMLEDYD 148
G P+ +T A+++ +ARV N+ + + + ++++ + +++L+ MY +
Sbjct: 417 SGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEII 476
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
V+D M+ K + TY +L+ R K +A +++M R+GI PD++T +L
Sbjct: 477 AAKRVFDSMR----KRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVL 532
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDL--CNLLLSMCADVGFLDEAVEIFEDIKSSG 266
A L + ++ +M E+ G+ + L + ++ + G+LD+A +IF I
Sbjct: 533 SACSHSNLVREGHWLFTKM-EHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIP--- 588
Query: 267 IYQPDESTFSSLI 279
Y+P + ++L+
Sbjct: 589 -YEPSSAMCATLL 600
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 91/195 (46%), Gaps = 13/195 (6%)
Query: 115 AERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLP 174
++L+ + D+V L+ Y D+ + ++ ++L P +N L+
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLP----WNVLIG 157
Query: 175 AVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALG--IYREMKENRI 232
+ R ++ + +Y+ M GI D TY ++++A L + A G ++ ++ +
Sbjct: 158 SYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAA--LLDFAYGRVVHGSIEVSSH 215
Query: 233 GVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAE 292
+ +CN L+SM G +D A +F+ + + D +++++I Y+ K+ EA
Sbjct: 216 RCNLYVCNALISMYKRFGKVDVARRLFDRMS-----ERDAVSWNAIINCYTSEEKLGEAF 270
Query: 293 AMLNEMIESGFKPNI 307
+L+ M SG + +I
Sbjct: 271 KLLDRMYLSGVEASI 285
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 130/300 (43%), Gaps = 7/300 (2%)
Query: 19 KPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVT---FATMINCARLCS 75
+P + +Y +K+ K + F L +EM RK P + F ++
Sbjct: 140 QPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEM--RKENPQLIEPELFVVLVQRFASAD 197
Query: 76 MSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFS 135
M +A+E ++MP FG EPD ++ A + +V A +L++ + + ++ F+
Sbjct: 198 MVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRM-RFPVNLRYFT 256
Query: 136 ALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRN 195
+L+ + + + V M G +P++ Y LL A K A + +M+R
Sbjct: 257 SLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRR 316
Query: 196 GISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEA 255
G P+ Y+ L++A E+A+ ++ EM+ V L+S G +D+
Sbjct: 317 GFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKC 376
Query: 256 VEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
+ +D+ G+ P E T+ ++ + E ++ +M + + P+I + +++
Sbjct: 377 YIVLDDMIKKGL-MPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIR 435
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 118/275 (42%), Gaps = 6/275 (2%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIF 104
A L +M +R +P+ + +I + A++ F +M + CE D VT ++
Sbjct: 306 AYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVS 365
Query: 105 AYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKP 164
+ + +D + D + +T+ ++ + E +++CL + + M+ + P
Sbjct: 366 GFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHP 425
Query: 165 NLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIY 224
++G YN ++ + + A ++ EM+ NG+SP T+ ++ +A +
Sbjct: 426 DIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHF 485
Query: 225 REMKENRIGVTVDL--CNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVY 282
+EM + LLL+ L+ A +++ I S G + + S I ++
Sbjct: 486 KEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELN--VLSWTIWIH 543
Query: 283 SCFAKVSEAEA--MLNEMIESGFKPNIFVITPLVK 315
+ F+K E EA EMIE F P L+K
Sbjct: 544 ALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMK 578
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 128/290 (44%), Gaps = 15/290 (5%)
Query: 18 IKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMS 77
+K E+ + N + ++ KC E +LFDEM + L +T+ +I+ ++
Sbjct: 183 VKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGL----ITWNAVISGYSQNGLA 238
Query: 78 DRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSAL 137
+E +E+M G PD T +V+ + A + + + ++ + + +A
Sbjct: 239 YDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNAS 298
Query: 138 IKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGI 197
I MY + + V+D M V +L ++ ++ + +++++M + GI
Sbjct: 299 ISMYARCGNLAKARAVFDIMPV----KSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGI 354
Query: 198 SPDYITYSTLLRAYIGGYLREDALGIYREMK-ENRIGVTVDLCNLLLSMCADVGFLDEAV 256
PD + +L A L + L ++R MK E ++ + + L+ + G LDEA+
Sbjct: 355 RPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAM 414
Query: 257 EIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
E E + +PD + + +L+ V AE ++IE F+PN
Sbjct: 415 EFIESMP----VEPDGAVWGALLGACKIHKNVDMAELAFAKVIE--FEPN 458
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 127/293 (43%), Gaps = 15/293 (5%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMI-NCARLCSMSDRAVEWFEKM 87
+NV ++ F + L+ ML+ PD +F ++ +CA L S+ + +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASL-SLPVSGQQLHCHV 79
Query: 88 PGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDY 147
GCE + +I Y + V A ++++ + +V ++ALI Y
Sbjct: 80 TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQL--SVCYNALISGYTANSKV 137
Query: 148 DQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTL 207
++ MK GV + T L+P L + ++ + + G+ + +
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEV----AV 193
Query: 208 LRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGI 267
L ++I Y++ ++ R + + + N ++S + G + +E++E +KSSG+
Sbjct: 194 LNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGV 253
Query: 268 YQPDESTFSSLITVYSCFAKVSEAE--AMLNEMIES-GFKPNIFVITPLVKCY 317
PD T L++V S A + + + +++ES GF PN+FV + Y
Sbjct: 254 C-PDPFT---LVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMY 302
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 154/371 (41%), Gaps = 53/371 (14%)
Query: 35 VFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEP 94
++ KC + A+++FDEM R + V++ ++I C + A++ F+ M EP
Sbjct: 196 MYSKCGNVNDAQRVFDEMGDRNV----VSWNSLITCFEQNGPAVEALDVFQMMLESRVEP 251
Query: 95 DAVTCATVIFAYARVENVDMAERLYDR-AKTENWRLDTVTFSALIKMYGMLEDYDQCLNV 153
D VT A+VI A A + + + + ++ R K + R D + +A + MY + +
Sbjct: 252 DEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFI 311
Query: 154 YDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIG 213
+D M + N+ +++ A A+L++ +M + ++++ L+ Y
Sbjct: 312 FDSMPI----RNVIAETSMISGYAMAASTKAARLMFTKMAERNV----VSWNALIAGYTQ 363
Query: 214 GYLREDALGIYREMKE-----------NRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDI 262
E+AL ++ +K N + DL L L M A V L + F+
Sbjct: 364 NGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFK-FQSG 422
Query: 263 KSSGIY--------------------------QPDESTFSSLITVYSCFAKVSEAEAMLN 296
+ I+ + D +++++I ++ +EA +
Sbjct: 423 EEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFR 482
Query: 297 EMIESGFKP-NIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKT 355
EM+ESG KP +I +I L C D+G+ P C+++++ +
Sbjct: 483 EMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRA 542
Query: 356 P-MEELGKLID 365
+EE +I+
Sbjct: 543 GFLEEAKSMIE 553
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/331 (19%), Positives = 134/331 (40%), Gaps = 48/331 (14%)
Query: 4 SETAPVVLRYLRDK-IKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNV 62
S+ + + +RY+ IK E+ + N + + KC E ++FD+M QR + N
Sbjct: 32 SKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNS 91
Query: 63 TFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRA 122
+ L D A F MP E D T +++ +A+ + + A +
Sbjct: 92 VVTGLTKLGFL----DEADSLFRSMP----ERDQCTWNSMVSGFAQHDRCEEALCYFAMM 143
Query: 123 KTENWRLDTVTFSALIKMYGMLED-----------------------------YDQCLNV 153
E + L+ +F++++ L D Y +C NV
Sbjct: 144 HKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNV 203
Query: 154 YDDMKV---LGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRA 210
D +V +G + N+ ++N+L+ + + A +++ M + + PD +T ++++ A
Sbjct: 204 NDAQRVFDEMGDR-NVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISA 262
Query: 211 YIGGYLREDALGIY-REMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQ 269
+ ++ R +K +++ + L N + M A + EA IF+ + +
Sbjct: 263 CASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIA 322
Query: 270 PDESTFSSLITVYSCFAKVSEAEAMLNEMIE 300
+S+I+ Y+ A A M +M E
Sbjct: 323 E-----TSMISGYAMAASTKAARLMFTKMAE 348
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 4/273 (1%)
Query: 47 KLFDEMLQRKLKPDNVTFATMI-NCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFA 105
KLFD+M + LKPD VT+ T++ C ++ + +A+E ++P G + D+V TV+
Sbjct: 187 KLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAI 246
Query: 106 YARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPN 165
A + AE + K E + +S+L+ Y DY + + +MK +G+ PN
Sbjct: 247 CASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPN 306
Query: 166 LGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYR 225
TLL + ++ + E++ G + + + Y L+ E+A I+
Sbjct: 307 KVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFD 366
Query: 226 EMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQP-DESTFSSLITVYSC 284
+MK + ++++S EA E+ D S Y+ D ++++ Y
Sbjct: 367 DMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRD--SETTYEKCDLVMLNTMLCAYCR 424
Query: 285 FAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
++ M+ +M E P+ L+K +
Sbjct: 425 AGEMESVMRMMKKMDEQAVSPDYNTFHILIKYF 457
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 102/239 (42%), Gaps = 41/239 (17%)
Query: 81 VEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKM 140
++ FE M G +V+ + + +NV A +Y E+ +++ ++++
Sbjct: 118 IQLFEWMQQHG--KISVSTYSSCIKFVGAKNVSKALEIYQSIPDESTKINVYICNSILSC 175
Query: 141 YGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARK--PLLAKLIYEEMKRNGIS 198
D C+ ++D MK G+KP++ TYNTLL + + P +LI E+ NGI
Sbjct: 176 LVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELI-GELPHNGIQ 234
Query: 199 PDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEI 258
D + Y T +L++CA G +EA
Sbjct: 235 MDSVMYGT-----------------------------------VLAICASNGRSEEAENF 259
Query: 259 FEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ +K G + P+ +SSL+ YS +A+ ++ EM G PN ++T L+K Y
Sbjct: 260 IQQMKVEG-HSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVY 317
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 138/292 (47%), Gaps = 16/292 (5%)
Query: 30 NVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSD--RAVEWFEKM 87
NV ++ F ++ +LF+ M Q ++ +T +C + + +A+E ++ +
Sbjct: 102 NVILRDFGISGRWQDLIQLFEWMQQH----GKISVSTYSSCIKFVGAKNVSKALEIYQSI 157
Query: 88 PGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED- 146
P + + C +++ + +D +L+D+ K + + D VT++ L+ +++
Sbjct: 158 PDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNG 217
Query: 147 YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYST 206
Y + + + ++ G++ + Y T+L + A+ ++MK G SP+ YS+
Sbjct: 218 YPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSS 277
Query: 207 LLRAYI--GGYLREDALGIYREMKENRIGVTVD--LCNLLLSMCADVGFLDEAVEIFEDI 262
LL +Y G Y + D L EMK IG+ + + LL + G D + E+ ++
Sbjct: 278 LLNSYSWKGDYKKADEL--MTEMKS--IGLVPNKVMMTTLLKVYIKGGLFDRSRELLSEL 333
Query: 263 KSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
+S+G Y +E + L+ S K+ EA ++ ++M G + + + + ++
Sbjct: 334 ESAG-YAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMI 384
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 95/225 (42%)
Query: 41 DFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCA 100
D++ A++L EM L P+ V T++ + DR+ E ++ G + +
Sbjct: 287 DYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYC 346
Query: 101 TVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVL 160
++ ++ ++ A ++D K + R D S +I + + + + D +
Sbjct: 347 MLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETT 406
Query: 161 GVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDA 220
K +L NT+L A RA + + ++M +SPDY T+ L++ +I L A
Sbjct: 407 YEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLA 466
Query: 221 LGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSS 265
+M + +LC+ L+ + EA ++ ++ S
Sbjct: 467 YQTTLDMHSKGHRLEEELCSSLIYHLGKIRAQAEAFSVYNMLRYS 511
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 101/206 (49%), Gaps = 5/206 (2%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQR--KLKPDNVTFATMINCARLCSMSDRAV 81
+ V +N + K+F+ +LFDE+ QR K+ PD +++ +I ++A+
Sbjct: 135 RSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAI 194
Query: 82 EWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMY 141
E +M G G E + T++ + + +++A+ L++ + LD ++ I M
Sbjct: 195 EIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRI-MS 253
Query: 142 GMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPL-LAKLIYEEMKRNGISPD 200
E ++ + ++M +G+KP+ +YN L+ A Y R L AK +YE ++ N +P+
Sbjct: 254 AQKESPERVKELIEEMSSMGLKPDTISYNYLMTA-YCERGMLDEAKKVYEGLEGNNCAPN 312
Query: 201 YITYSTLLRAYIGGYLREDALGIYRE 226
T+ TL+ L E I+++
Sbjct: 313 AATFRTLIFHLCYSRLYEQGYAIFKK 338
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 136/296 (45%), Gaps = 27/296 (9%)
Query: 1 MENSETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPD 60
+ + +PV RY +EL + +A KC+ F E L + +
Sbjct: 56 VSDHSASPVSSRY---------AQELTVRRLA-----KCRRFSDIETLIESHKNDPKIKE 101
Query: 61 NVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYD 120
++T+I SM + A+ FE+M +G AV+ ++ A +N D +L+D
Sbjct: 102 EPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFD 161
Query: 121 RAKTENWRL--DTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYR 178
++ D +++ LIK Y ++ + + M+ G++ + T+L ++Y+
Sbjct: 162 EIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYK 221
Query: 179 ARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKE--NRIGVTV 236
+ +A ++ EM + G D Y+ + + ++++ +E+ E + +G+
Sbjct: 222 KGELEVADNLWNEMVKKGCELDNAAYNVRIMS-----AQKESPERVKELIEEMSSMGLKP 276
Query: 237 DLC--NLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSE 290
D N L++ + G LDEA +++E ++ + P+ +TF +LI + C++++ E
Sbjct: 277 DTISYNYLMTAYCERGMLDEAKKVYEGLEGNNC-APNAATFRTLI-FHLCYSRLYE 330
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 135/305 (44%), Gaps = 28/305 (9%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFD--EMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++ + ++ KC + + A+ LFD E L R+ ++ MI +A+ F
Sbjct: 317 IVRTATLDMYAKCDNMQDAQILFDNSENLNRQ------SYNAMITGYSQEEHGFKALLLF 370
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
++ G D ++ + V A A V+ + ++Y A + LD +A I MYG
Sbjct: 371 HRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKC 430
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
+ + V+D+M+ + + ++N ++ A + K ++ M R+ I PD T+
Sbjct: 431 QALAEAFRVFDEMR----RRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTF 486
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEI----FE 260
++L+A GG L + I+ + ++ + + L+ M + G ++EA +I F+
Sbjct: 487 GSILKACTGGSLGY-GMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQ 545
Query: 261 DIKSSGIYQPDES-----------TFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFV 309
SG + E +++S+I+ Y + +A+ + M+E G P+ F
Sbjct: 546 RANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFT 605
Query: 310 ITPLV 314
++
Sbjct: 606 YATVL 610
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 138/318 (43%), Gaps = 31/318 (9%)
Query: 18 IKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMS 77
IK + ++ + N A+ ++ KC+ A ++FDEM +R D V++ +I
Sbjct: 409 IKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRR----DAVSWNAIIAAHEQNGKG 464
Query: 78 DRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSAL 137
+ F M EPD T +++ A ++ ++ ++ +L
Sbjct: 465 YETLFLFVSMLRSRIEPDEFTFGSILKA-CTGGSLGYGMEIHSSIVKSGMASNSSVGCSL 523
Query: 138 IKMY---GMLED-------YDQCLNVYDDMKVLGVKPNLG------TYNTLLPAVYRARK 181
I MY GM+E+ + Q NV M+ L N ++N+++ +
Sbjct: 524 IDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQ 583
Query: 182 PLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALG--IYREMKENRIGVTVDLC 239
A++++ M GI+PD TY+T+L L LG I+ ++ + + V +C
Sbjct: 584 SEDAQMLFTRMMEMGITPDKFTYATVLDTCAN--LASAGLGKQIHAQVIKKELQSDVYIC 641
Query: 240 NLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMI 299
+ L+ M + G L ++ +FE KS + D T++++I Y+ K EA + MI
Sbjct: 642 STLVDMYSKCGDLHDSRLMFE--KS---LRRDFVTWNAMICGYAHHGKGEEAIQLFERMI 696
Query: 300 ESGFKPN-IFVITPLVKC 316
KPN + I+ L C
Sbjct: 697 LENIKPNHVTFISILRAC 714
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 113/284 (39%), Gaps = 59/284 (20%)
Query: 33 MKVFKKCKDFEGAEKLFDEMLQR----------------KLKPDNVTFATMINCARLCSM 76
+ ++ KC E AEK+ QR +L+ V++ ++I+ +
Sbjct: 524 IDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQ 583
Query: 77 SDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSA 136
S+ A F +M G PD T ATV+ A + + + ++++ + + + D S
Sbjct: 584 SEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICST 643
Query: 137 LIKMYGMLEDYDQCLNVYDDMKVL--GVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKR 194
L+ M Y +C +++D + ++ + T+N ++ K A ++E M
Sbjct: 644 LVDM------YSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMIL 697
Query: 195 NGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDE 254
I P+++T+ ++LRA CA +G +D+
Sbjct: 698 ENIKPNHVTFISILRA-----------------------------------CAHMGLIDK 722
Query: 255 AVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEM 298
+E F +K P +S+++ + KV A ++ EM
Sbjct: 723 GLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREM 766
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 109/217 (50%), Gaps = 12/217 (5%)
Query: 16 DKIKPTRGKEL-VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMIN-CARL 73
+K+ R +E+ V +N + + + E A+ LF M++ + PD T+AT+++ CA L
Sbjct: 557 EKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANL 616
Query: 74 CSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVT 133
S + + ++ + D C+T++ Y++ ++ + +++++ R D VT
Sbjct: 617 AS-AGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKS----LRRDFVT 671
Query: 134 FSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLI--YEE 191
++A+I Y ++ + +++ M + +KPN T+ ++L A A L+ K + +
Sbjct: 672 WNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRAC--AHMGLIDKGLEYFYM 729
Query: 192 MKRN-GISPDYITYSTLLRAYIGGYLREDALGIYREM 227
MKR+ G+ P YS ++ + AL + REM
Sbjct: 730 MKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREM 766
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/338 (18%), Positives = 135/338 (39%), Gaps = 44/338 (13%)
Query: 15 RDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLC 74
R R + L ++ + + + + KLF M++ + PD+ F ++ C
Sbjct: 135 RKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANC 194
Query: 75 SMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTF 134
+ + G +++ YA+ +D A + + R + D + +
Sbjct: 195 GDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER----DVIAW 250
Query: 135 SALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKR 194
++++ Y +++ + + +M+ G+ P L T+N L+ + K A + ++M+
Sbjct: 251 NSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMET 310
Query: 195 NGISPDYITYSTLLRAYIGGYLREDALGIYREM-------KENRIGVTVDLC-------- 239
GI+ D T++ ++ I +R AL ++R+M I V C
Sbjct: 311 FGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQ 370
Query: 240 --------------------NLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLI 279
N L+ M + G L++A ++F+ +K+ +Y T++S+I
Sbjct: 371 GSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVY-----TWNSMI 425
Query: 280 TVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
T Y +A + M ++ +PNI ++ Y
Sbjct: 426 TGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGY 463
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 130/279 (46%), Gaps = 10/279 (3%)
Query: 2 ENSETAPVVLRYLRDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDN 61
++ E +V ++ I P LV +N+ + + + + A L +M + D
Sbjct: 262 KHEEAVELVKEMEKEGISPG----LVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADV 317
Query: 62 VTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDR 121
T+ MI+ M +A++ F KM G P+AVT + + A + ++ ++ ++
Sbjct: 318 FTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSI 377
Query: 122 AKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARK 181
A + D + ++L+ MY + V+D +K ++ T+N+++ +A
Sbjct: 378 AVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVK----NKDVYTWNSMITGYCQAGY 433
Query: 182 PLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREM-KENRIGVTVDLCN 240
A ++ M+ + P+ IT++T++ YI +A+ +++ M K+ ++ N
Sbjct: 434 CGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWN 493
Query: 241 LLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLI 279
L+++ G DEA+E+F ++ S + P+ T SL+
Sbjct: 494 LIIAGYIQNGKKDEALELFRKMQFSR-FMPNSVTILSLL 531
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 139/280 (49%), Gaps = 8/280 (2%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCA-RLCSMS-DRAV 81
K++V +N+ + + + E A + M KLK D VT AT+++ A R ++ + V
Sbjct: 338 KDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEV 397
Query: 82 EWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMY 141
+ + F E D V +TV+ YA+ ++ A++++D + D + ++ L+ Y
Sbjct: 398 QCYCIRHSF--ESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK----DLILWNTLLAAY 451
Query: 142 GMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDY 201
+ L ++ M++ GV PN+ T+N ++ ++ R + AK ++ +M+ +GI P+
Sbjct: 452 AESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNL 511
Query: 202 ITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFED 261
I+++T++ + E+A+ R+M+E+ + + LS CA + L I
Sbjct: 512 ISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGY 571
Query: 262 IKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIES 301
I + + S +SL+ +Y+ +++AE + + S
Sbjct: 572 IIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYS 611
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 144/334 (43%), Gaps = 49/334 (14%)
Query: 18 IKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMS 77
I+ + ++VL + M ++ KC A+K+FD +++ L + + T++ +S
Sbjct: 402 IRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDL----ILWNTLLAAYAESGLS 457
Query: 78 DRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSAL 137
A+ F M G P+ +T +I + R VD A+ ++ + ++ + ++++ +
Sbjct: 458 GEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTM 517
Query: 138 IKMYGMLED--YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRN 195
M GM+++ ++ + M+ G++PN + L A + + I+ + RN
Sbjct: 518 --MNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRN 575
Query: 196 GISPDYITYST--------------------------------LLRAY-IGGYLREDALG 222
++ T ++ AY + G L+E A+
Sbjct: 576 LQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKE-AIA 634
Query: 223 IYREMKENRIGVTVDLCNL--LLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLIT 280
+YR ++ +G+ D + +LS C G +++A+EIF DI S +P + ++
Sbjct: 635 LYRSLE--GVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVD 692
Query: 281 VYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
+ A E E L + E FKP+ +I LV
Sbjct: 693 L---LASAGETEKALRLIEEMPFKPDARMIQSLV 723
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 131/339 (38%), Gaps = 67/339 (19%)
Query: 35 VFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEP 94
++ KC + A K+FDE+ R N + + ++ A+ F M G EP
Sbjct: 217 MYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGK----NEEAIRLFSDMRKQGVEP 272
Query: 95 DAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMY---GMLE------ 145
VT +T + A A + V+ ++ + A LD + ++L+ Y G++E
Sbjct: 273 TRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVF 332
Query: 146 ----------------DYDQCLNVYDD------MKVLGVKPNLGTYNTLLPAVYRARKPL 183
Y Q V D M++ +K + T TL+ A R
Sbjct: 333 DRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLK 392
Query: 184 LAKLIYEEMKRNGISPD-------------------------------YITYSTLLRAYI 212
L K + R+ D I ++TLL AY
Sbjct: 393 LGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYA 452
Query: 213 GGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDE 272
L +AL ++ M+ + V NL++ G +DEA ++F ++SSGI P+
Sbjct: 453 ESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGII-PNL 511
Query: 273 STFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVIT 311
++++++ EA L +M ESG +PN F IT
Sbjct: 512 ISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSIT 550
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 126/261 (48%), Gaps = 17/261 (6%)
Query: 23 GKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVE 82
G ++V +N + F KC + A+ LFDEM QR + V++ +MI+ A++
Sbjct: 189 GFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR----NGVSWNSMISGFVRNGRFKDALD 244
Query: 83 WFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG 142
F +M +PD T +++ A A + + +++ + L+++ +ALI MY
Sbjct: 245 MFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYC 304
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
++ LNV++ K L +N+++ + A ++ E++R+G+ PD +
Sbjct: 305 KCGCIEEGLNVFE----CAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSV 360
Query: 203 TYSTLLR--AYIGGYLREDALGIYREMKEN-RIGVTVDLCNLLLSMCADVGFLDEAVEIF 259
++ +L A+ G R D +R MKE I ++ L++++ G L+EA +
Sbjct: 361 SFIGVLTACAHSGEVHRADEF--FRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALI 418
Query: 260 EDIKSSGIYQPDESTFSSLIT 280
+++ + D +SSL++
Sbjct: 419 KNMP----VEEDTVIWSSLLS 435
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 163/381 (42%), Gaps = 62/381 (16%)
Query: 22 RGKELVLYN-VAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRA 80
R K + +N + + + K A +LFDE+ + PD ++ M++C ++A
Sbjct: 88 RAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPE----PDTFSYNIMLSCYVRNVNFEKA 143
Query: 81 VEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKM 140
+F++MP DA + T+I YAR ++ A L+ +N V+++A+I
Sbjct: 144 QSFFDRMPF----KDAASWNTMITGYARRGEMEKARELFYSMMEKN----EVSWNAMISG 195
Query: 141 YGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPD 200
Y D ++ + + V GV + ++ +A+K LA+ ++++M ++ +
Sbjct: 196 YIECGDLEKASHFFKVAPVRGVV----AWTAMITGYMKAKKVELAEAMFKDMT---VNKN 248
Query: 201 YITYSTLLRAYIGGYLREDALGIYREMKE-----------------------------NR 231
+T++ ++ Y+ ED L ++R M E ++
Sbjct: 249 LVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQ 308
Query: 232 IGVTVDLCN------LLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCF 285
I LCN L+SM G L +A ++FE +K + D ++++I+ Y+
Sbjct: 309 IVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK-----KKDVVAWNAMISGYAQH 363
Query: 286 AKVSEAEAMLNEMIESGFKPN-IFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHC 344
+A + EMI++ +P+ I + L+ C D+ + P
Sbjct: 364 GNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDH 423
Query: 345 CCCLLNIMTKT-PMEELGKLI 364
C+++++ + +EE KLI
Sbjct: 424 YTCMVDLLGRAGKLEEALKLI 444
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/285 (19%), Positives = 120/285 (42%), Gaps = 14/285 (4%)
Query: 17 KIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSM 76
K+ P RG +V + + + K K E AE +F +M K + VT+ MI+ S
Sbjct: 210 KVAPVRG--VVAWTAMITGYMKAKKVELAEAMFKDMTVNK---NLVTWNAMISGYVENSR 264
Query: 77 SDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSA 136
+ ++ F M G P++ ++ + + + + + +++ D ++
Sbjct: 265 PEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTS 324
Query: 137 LIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNG 196
LI MY + +++ MK K ++ +N ++ + A ++ EM N
Sbjct: 325 LISMYCKCGELGDAWKLFEVMK----KKDVVAWNAMISGYAQHGNADKALCLFREMIDNK 380
Query: 197 ISPDYITYSTLLRAYIGGYLREDALGIYREM-KENRIGVTVDLCNLLLSMCADVGFLDEA 255
I PD+IT+ +L A L + + M ++ ++ D ++ + G L+EA
Sbjct: 381 IRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEA 440
Query: 256 VEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIE 300
+++ + ++P + F +L+ V AE ++++
Sbjct: 441 LKLIRSMP----FRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQ 481
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 123/295 (41%), Gaps = 50/295 (16%)
Query: 18 IKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMS 77
+K E N + + KC + +G EK+F M +R+ DNVT+ +MI+ +
Sbjct: 544 LKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERR---DNVTWNSMISGYIHNELL 600
Query: 78 DRAVE--WFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFS 135
+A++ WF M G D+ ATV+ A+A V ++ ++ + D V S
Sbjct: 601 AKALDLVWF--MLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGS 658
Query: 136 ALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRN 195
AL+ MY D L ++ M V N ++N+++ R + A ++E MK +
Sbjct: 659 ALVDMYSKCGRLDYALRFFNTMPV----RNSYSWNSMISGYARHGQGEEALKLFETMKLD 714
Query: 196 GIS-PDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDE 254
G + PD++T+ +GV LS C+ G L+E
Sbjct: 715 GQTPPDHVTF---------------------------VGV--------LSACSHAGLLEE 739
Query: 255 AVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFV 309
+ FE + S P FS + V ++ + E + +M KPN+ +
Sbjct: 740 GFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKM---PMKPNVLI 791
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 126/276 (45%), Gaps = 29/276 (10%)
Query: 15 RDKIKPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFAT-MINCARL 73
R + + + +V++ + F KC+ A LF +ML+ + P+ T A +++C+ L
Sbjct: 266 RKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSL 325
Query: 74 CSMSD-RAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTV 132
S+ ++V + M G E DAV + I YAR N+ MA ++D N +
Sbjct: 326 GSLRHGKSVHGY--MIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERN----VI 379
Query: 133 TFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEM 192
++S++I +G+ +++ L+ + MK V PN T+ +LL A + +E M
Sbjct: 380 SWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESM 439
Query: 193 KRN-GISPDYITYSTLLRAYIGGYLREDALGIYREMKENR-------IGVTVDLCNLLLS 244
R+ G+ P+ Y+ ++ D LG E+ E + + LLS
Sbjct: 440 TRDYGVVPEEEHYACMV----------DLLGRAGEIGEAKSFIDNMPVKPMASAWGALLS 489
Query: 245 MCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLIT 280
C +D A EI E + S +P++S+ L++
Sbjct: 490 ACRIHKEVDLAGEIAEKLLS---MEPEKSSVYVLLS 522
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/267 (19%), Positives = 116/267 (43%), Gaps = 45/267 (16%)
Query: 33 MKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGC 92
+ ++ KC+ + A KLF+ + R + V + T+I+ C + A + F +M
Sbjct: 253 IDMYVKCRLLDNARKLFETSVDRNV----VMWTTLISGFAKCERAVEAFDLFRQMLRESI 308
Query: 93 EPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLN 152
P+ T A ++ + + + ++ + ++ +D V F++ I MY +C N
Sbjct: 309 LPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYA------RCGN 362
Query: 153 VYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYI 212
+ +A+ +++ M + I++S+++ A+
Sbjct: 363 IQ-----------------------------MARTVFDMMPERNV----ISWSSMINAFG 389
Query: 213 GGYLREDALGIYREMK-ENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPD 271
L E+AL + +MK +N + +V +LL S C+ G + E + FE + P+
Sbjct: 390 INGLFEEALDCFHKMKSQNVVPNSVTFVSLL-SACSHSGNVKEGWKQFESMTRDYGVVPE 448
Query: 272 ESTFSSLITVYSCFAKVSEAEAMLNEM 298
E ++ ++ + ++ EA++ ++ M
Sbjct: 449 EEHYACMVDLLGRAGEIGEAKSFIDNM 475
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 117/249 (46%), Gaps = 9/249 (3%)
Query: 76 MSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTE-NWRLDTVTF 134
+ D +V+ +KM G +P+A T +++ ++ R +M ER++ + E + ++
Sbjct: 226 LDDVSVDEAKKMIG-KIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSY 284
Query: 135 SALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKR 194
+ L++ Y + V+++MKV GV ++ YNT++ + + + AK ++ +M
Sbjct: 285 NVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGL 344
Query: 195 NGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRI---GVTVDLCNLLLSMCADVG- 250
GI +TY L+ Y + L +YREMK G+T++ L+ +C D
Sbjct: 345 KGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIE--ALVEGLCDDRDG 402
Query: 251 -FLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFV 309
+ EA +I +D ++ P + + L+ K+ A + EM+ GFKP+
Sbjct: 403 QRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQET 462
Query: 310 ITPLVKCYG 318
+ YG
Sbjct: 463 YRAFIDGYG 471
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 125/276 (45%), Gaps = 17/276 (6%)
Query: 30 NVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPG 89
N + ++ +C D A + + K K + VT+ +MI + C++ +A+ F +M
Sbjct: 196 NAVISMYGRCHDGAAAYEAWTVFEAIKFK-NLVTWNSMIAAFQCCNLGKKAIGVFMRMHS 254
Query: 90 FGCEPDAVTCATVIFAYARVENVDMAE------RLYDRAKTENWRLDTVTFSALIKMYG- 142
G D T + + + ++ E +L+ T +ALIK+Y
Sbjct: 255 DGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSE 314
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
MLEDY C ++ +M ++ +N ++ A + P A ++ ++++ +SPD+
Sbjct: 315 MLEDYTDCYKLFMEMSHC---RDIVAWNGIITA-FAVYDPERAIHLFGQLRQEKLSPDWY 370
Query: 203 TYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDI 262
T+S++L+A G AL I+ ++ + L N L+ A G LD + +F+D+
Sbjct: 371 TFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDM 430
Query: 263 KSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEM 298
S D +++S++ YS +V + +M
Sbjct: 431 DSR-----DVVSWNSMLKAYSLHGQVDSILPVFQKM 461
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 117/290 (40%), Gaps = 40/290 (13%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMIN--CARLCSMSDRAVEWF 84
V Y++ + + E A L D+M ++ +P T+ +I C R + D+A F
Sbjct: 267 VSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDR--GLIDKAFNLF 324
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
++M GC+P+ T +I R ++ A + + + +T++ALI Y
Sbjct: 325 DEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKD 384
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
+ M+ KPN+ T+N L+ + R KP A + + M NG+SPD ++Y
Sbjct: 385 GRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
+ L I G RE G ++ A ++ +
Sbjct: 445 NVL----IDGLCRE-------------------------------GHMNTAYKLLSSMNC 469
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
I +PD TF+++I + K A A L M+ G + T L+
Sbjct: 470 FDI-EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLI 518
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 124/277 (44%), Gaps = 4/277 (1%)
Query: 43 EGAEKLFDEMLQRKLKPD-NVTFATMINCARLCSMSDRAVEWFEKMPG-FGCEPDAVTCA 100
E AE ++L+ D ++ + ++ R ++ D A++ F+ M C P++V+ +
Sbjct: 212 EAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRD-ALKVFDVMSKEVTCAPNSVSYS 270
Query: 101 TVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVL 160
+I V ++ A L D+ + + T T++ LIK D+ N++D+M
Sbjct: 271 ILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPR 330
Query: 161 GVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDA 220
G KPN+ TY L+ + R K A + +M ++ I P ITY+ L+ Y A
Sbjct: 331 GCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPA 390
Query: 221 LGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLIT 280
+ M++ V N L+ VG +AV + + + +G+ PD +++ LI
Sbjct: 391 FELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL-SPDIVSYNVLID 449
Query: 281 VYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
++ A +L+ M +P+ T ++ +
Sbjct: 450 GLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAF 486
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 122/319 (38%), Gaps = 44/319 (13%)
Query: 39 CKD--FEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFE---KMPGFGCE 93
C+D E A + +M++ ++ P +T+ +IN C R V FE M C+
Sbjct: 347 CRDGKIEEANGVCRKMVKDRIFPSVITYNALIN--GYCK-DGRVVPAFELLTVMEKRACK 403
Query: 94 PDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNV 153
P+ T ++ RV A L R D V+++ LI + +
Sbjct: 404 PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKL 463
Query: 154 YDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIG 213
M ++P+ T+ ++ A + K +A M R GIS D +T +TL+
Sbjct: 464 LSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCK 523
Query: 214 GYLREDALGIYREMKENRIGVTVDLCNLLLSMCAD------------------------- 248
DAL I + + RI T N++L M +
Sbjct: 524 VGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVT 583
Query: 249 ----------VGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEM 298
G + + I E +K SG P+ ++ +I F +V EAE +L+ M
Sbjct: 584 YTTLVDGLIRSGDITGSFRILELMKLSGCL-PNVYPYTIIINGLCQFGRVEEAEKLLSAM 642
Query: 299 IESGFKPNIFVITPLVKCY 317
+SG PN T +VK Y
Sbjct: 643 QDSGVSPNHVTYTVMVKGY 661
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 114/308 (37%), Gaps = 71/308 (23%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIF 104
A L ML L PD V++ +I+ + A + M F EPD +T +I
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Query: 105 AYARVENVDMAERLYDRAKTENWRLDTVTFSALIK---MYGMLED--------------- 146
A+ + D+A + LD VT + LI G D
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILT 544
Query: 147 YDQCLNVYDDM-----KV------------LGVKPNLGTYNTLLPAVYRARKPLLAKLIY 189
LNV DM KV LG+ P++ TY TL+ + R+ + I
Sbjct: 545 TPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRIL 604
Query: 190 EEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADV 249
E MK +G P+ Y+ ++ LC
Sbjct: 605 ELMKLSGCLPNVYPYTIIING---------------------------LCQF-------- 629
Query: 250 GFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFV 309
G ++EA ++ ++ SG+ P+ T++ ++ Y K+ A + M+E G++ N +
Sbjct: 630 GRVEEAEKLLSAMQDSGV-SPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRI 688
Query: 310 ITPLVKCY 317
+ L++ +
Sbjct: 689 YSSLLQGF 696
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 10/195 (5%)
Query: 127 WRLDTVTFSALIKMYGMLE-DYDQCLNVYDDMK-VLGVKPNLGTYNTLLPAVYRARKPLL 184
+R+ ALIK E + + + +D+++ V G + N Y++LL ++ + L
Sbjct: 119 YRVAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFL 178
Query: 185 AKLIYEEMKRNGISPDYITYSTLLRAYI-GGYLREDALGIYREMKENRIGVTVDL---CN 240
A + Y M+ +G I Y T++ A GY + + + +K IG +D +
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILK---IGFVLDSHIGTS 235
Query: 241 LLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIE 300
LLL C + D A+++F+ + P+ ++S LI ++ EA + ++M E
Sbjct: 236 LLLGFCRGLNLRD-ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGE 294
Query: 301 SGFKPNIFVITPLVK 315
G +P+ T L+K
Sbjct: 295 KGCQPSTRTYTVLIK 309
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 119/282 (42%), Gaps = 19/282 (6%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
YN+ + + K + E EK+ EM++ PD ++++ +I + +VE F+ +
Sbjct: 258 YNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIK 317
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
G PDA +I + + D + R Y R E + T+S L+
Sbjct: 318 HKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVS 377
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
L ++++M GV P G + L + P A +IY++ ++ G Y LL
Sbjct: 378 DALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLL 437
Query: 209 R--AYIG--GYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
+ + G G L L ++ EM+E+ V++ ++ +G L+ AV + E+
Sbjct: 438 KRLSRFGKCGML----LNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMR 493
Query: 265 SGIYQPDESTFSSLIT----------VYSCFAKVSEAEAMLN 296
G + P+ +S L + Y F K+ +A A N
Sbjct: 494 KG-FCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKARATEN 534
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 127/330 (38%), Gaps = 35/330 (10%)
Query: 19 KPTRGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSD 78
+P K++ Y+V ++ + K F + M+ + PD ++
Sbjct: 144 EPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVR 203
Query: 79 RAVEWFEKMPGFG---------------CEPDAVTCATVIF------------------- 104
RA+E FE+ FG CE V+ A +F
Sbjct: 204 RAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMIS 263
Query: 105 AYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKP 164
++++ V+ E++ + D +++S LI+ G + + ++D++K G P
Sbjct: 264 GWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVP 323
Query: 165 NLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIY 224
+ YN ++ AR + Y M P+ TYS L+ I G DAL I+
Sbjct: 324 DANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIF 383
Query: 225 REMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSC 284
EM + T L L G A+ I++ + +G + ES + L+ S
Sbjct: 384 EEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGC-RISESAYKLLLKRLSR 442
Query: 285 FAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
F K + +EM ESG+ ++ V +V
Sbjct: 443 FGKCGMLLNVWDEMQESGYPSDVEVYEYIV 472
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 76/158 (48%), Gaps = 2/158 (1%)
Query: 161 GVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDA 220
GV ++G+Y+ +L A+ R + + + M G++PD + + +++ + A
Sbjct: 146 GVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRA 205
Query: 221 LGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLIT 280
+ ++ E + + + + N LL + + A +F K G D +++ +I+
Sbjct: 206 IELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKK--GNIPFDSCSYNIMIS 263
Query: 281 VYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
+S +V E E +L EM+ESGF P+ + L++ G
Sbjct: 264 GWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLG 301
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 118/278 (42%), Gaps = 11/278 (3%)
Query: 26 LVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMI-NCARLCSMSDRAVEWF 84
++ +N + + C+ E A LFD M+ KP ++T T++ C S+ +R
Sbjct: 498 VITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSL-ERGQMIH 556
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
+ E + A +I YA+ +++ + L+D + D V ++ +I YGM
Sbjct: 557 RYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQK----DAVCWNVMISGYGMH 612
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY 204
D + + ++D M+ VKP T+ LL A A K ++ +M + + P+ Y
Sbjct: 613 GDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHY 672
Query: 205 STLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS 264
S L+ E+A M + GV + LLS C G + + + E +
Sbjct: 673 SCLVDLLSRSGNLEEAESTVMSMPFSPDGV---IWGTLLSSCMTHGEFEMGIRMAERAVA 729
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESG 302
S ++ + L +YS K EAE M ESG
Sbjct: 730 SD--PQNDGYYIMLANMYSAAGKWEEAERAREMMRESG 765
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 120/279 (43%), Gaps = 26/279 (9%)
Query: 28 LYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKM 87
L +VA K+F + + EG ++ ++ ML+ K + C C +E F K+
Sbjct: 381 LLSVAEKLFCRISE-EGNKEAWNTMLKGYGK---------MKCHVKC------IELFRKI 424
Query: 88 PGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDY 147
G E D+ + +VI + + + V + + L+ + L ++LI +YG + D
Sbjct: 425 QNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDL 484
Query: 148 DQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTL 207
++ + N+ T+N ++ + + A +++ M P IT TL
Sbjct: 485 TVAWRMFCE-----ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTL 539
Query: 208 LRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGI 267
L A + E I+R + E + + L L+ M A G L+++ E+F+
Sbjct: 540 LMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGN---- 595
Query: 268 YQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
Q D ++ +I+ Y V A A+ ++M ES KP
Sbjct: 596 -QKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPT 633
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 159/352 (45%), Gaps = 28/352 (7%)
Query: 48 LFDEMLQRKLKPDNVTFATMINCARLCSM-SDRAVEWFEKMPGFGCEPDAVTCATVIFAY 106
L+ ++L ++ P+ TF++++ + CS S + + G G +P T ++ Y
Sbjct: 117 LYVQLLSSEINPNEFTFSSLL---KSCSTKSGKLIHTHVLKFGLGIDPYVAT--GLVDVY 171
Query: 107 ARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNL 166
A+ +V A++++DR + V+ +A+I Y + + ++D M + ++
Sbjct: 172 AKGGDVVSAQKVFDRMPERSL----VSSTAMITCYAKQGNVEAARALFDSM----CERDI 223
Query: 167 GTYNTLLPAVYRARKPLLAKLIYEEMKRNGI-SPDYITYSTLLRA--YIGGYLREDALGI 223
++N ++ + P A ++++++ G PD IT L A IG E I
Sbjct: 224 VSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGAL--ETGRWI 281
Query: 224 YREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYS 283
+ +K +RI + V +C L+ M + G L+EAV +F D + D ++++I Y+
Sbjct: 282 HVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTP-----RKDIVAWNAMIAGYA 336
Query: 284 CFAKVSEAEAMLNEMIE-SGFKP-NIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPD 341
+A + NEM +G +P +I I L C G ++GI P
Sbjct: 337 MHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPK 396
Query: 342 GHCCCCLLNIMTKTPMEELGKLIDCIEKANEELGSVVRYLVEGQEEGDQDFI 393
CL++++ + +L + + I+ N + SV+ V G + DF+
Sbjct: 397 IEHYGCLVSLLGRAG--QLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFV 446
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 111/270 (41%), Gaps = 22/270 (8%)
Query: 35 VFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEP 94
V+ K D A+K+FD M +R L V+ MI C + A F+ M CE
Sbjct: 170 VYAKGGDVVSAQKVFDRMPERSL----VSSTAMITCYAKQGNVEAARALFDSM----CER 221
Query: 95 DAVTCATVIFAYARVENVDMAERLYDRAKTENW-RLDTVTFSALIKMYGMLEDYDQCLNV 153
D V+ +I YA+ + A L+ + E + D +T A + + + +
Sbjct: 222 DIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWI 281
Query: 154 YDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIG 213
+ +K ++ N+ L+ + A L++ + R D + ++ ++ Y
Sbjct: 282 HVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRK----DIVAWNAMIAGYAM 337
Query: 214 GYLREDALGIYREMKENRIGVT----VDLCNL-LLSMCADVGFLDEAVEIFEDIKSSGIY 268
+DAL ++ EM+ G+T D+ + L CA G ++E + IFE +
Sbjct: 338 HGYSQDALRLFNEMQ----GITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGI 393
Query: 269 QPDESTFSSLITVYSCFAKVSEAEAMLNEM 298
+P + L+++ ++ A + M
Sbjct: 394 KPKIEHYGCLVSLLGRAGQLKRAYETIKNM 423
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 122/292 (41%), Gaps = 18/292 (6%)
Query: 28 LYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKM 87
L N + ++ KC AEK FD L+ D + +M++ + + F +
Sbjct: 97 LGNAIVDLYAKCAQVSYAEKQFD-----FLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSL 151
Query: 88 PGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDY 147
P+ T + V+ AR NV+ +++ ++ AL+ MY
Sbjct: 152 FENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYA----- 206
Query: 148 DQCLNVYDDMKVLG--VKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYS 205
+C + D +V V PN + L +A P A L++E M+ G PD++ +
Sbjct: 207 -KCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFV 265
Query: 206 TLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSS 265
T++ YI +DA ++ EM V N+++S G A+E F +++ S
Sbjct: 266 TVINTYIRLGKLKDARLLFGEMSSP----DVVAWNVMISGHGKRGCETVAIEYFFNMRKS 321
Query: 266 GIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ + ST S+++ A + + E I+ G NI+V + LV Y
Sbjct: 322 SV-KSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMY 372
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 124/285 (43%), Gaps = 15/285 (5%)
Query: 35 VFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEP 94
++ KC A ++F+ ++ P+ V + + + + + AV FE+M G P
Sbjct: 204 MYAKCDRISDARRVFEWIVD----PNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRP 259
Query: 95 DAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVY 154
D + TVI Y R+ + A L+ + D V ++ +I +G + +
Sbjct: 260 DHLAFVTVINTYIRLGKLKDARLLFGEMSSP----DVVAWNVMISGHGKRGCETVAIEYF 315
Query: 155 DDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGG 214
+M+ VK T ++L A+ L +++ E + G++ + S+L+ Y
Sbjct: 316 FNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKC 375
Query: 215 YLREDALGIYREMKE-NRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDES 273
E A ++ ++E N + N ++ A G + +E+F D+KSSG Y D+
Sbjct: 376 EKMEAAAKVFEALEEKNDV-----FWNAMIRGYAHNGESHKVMELFMDMKSSG-YNIDDF 429
Query: 274 TFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG 318
TF+SL++ + + + +I+ N+FV LV Y
Sbjct: 430 TFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYA 474
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 123/281 (43%), Gaps = 11/281 (3%)
Query: 41 DFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP--GFGCEPDAVT 98
+ E A LF EML R + P +TFAT++ ++ ++ GF E + +
Sbjct: 609 NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLG 668
Query: 99 CATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMK 158
+++ Y + A L+ + V ++ ++ + Y++ L Y +M+
Sbjct: 669 I-SLLGMYMNSRGMTEACALFSELSSPK---SIVLWTGMMSGHSQNGFYEEALKFYKEMR 724
Query: 159 VLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLRE 218
GV P+ T+ T+L + I+ + D +T +TL+ Y +
Sbjct: 725 HDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMK 784
Query: 219 DALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSL 278
+ ++ EM+ V+ N L++ A G+ ++A++IF+ ++ S I PDE TF +
Sbjct: 785 GSSQVFDEMRRRSNVVS---WNSLINGYAKNGYAEDALKIFDSMRQSHI-MPDEITFLGV 840
Query: 279 ITVYSCFAKVSEAEAMLNEMI-ESGFKPNIFVITPLVKCYG 318
+T S KVS+ + MI + G + + + +V G
Sbjct: 841 LTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLG 881
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 123/278 (44%), Gaps = 11/278 (3%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEW 83
K++V YN + + + +E A ++ EM LKPD+ T ++++ + E
Sbjct: 205 KDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEI 264
Query: 84 FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGM 143
+ G + D ++++ YA+ ++ +ER++ R D +++++L+ Y
Sbjct: 265 HGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCR----DGISWNSLVAGYVQ 320
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYIT 203
Y++ L ++ M VKP +++++PA L K ++ + R G +
Sbjct: 321 NGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFI 380
Query: 204 YSTLLRAYIGGYLREDALGIYREMKE-NRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDI 262
S L+ Y + A I+ M + + T + L G EAV +FE++
Sbjct: 381 ASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALH-----GHGHEAVSLFEEM 435
Query: 263 KSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIE 300
K G+ +P++ F +++T S V EA N M +
Sbjct: 436 KRQGV-KPNQVAFVAVLTACSHVGLVDEAWGYFNSMTK 472
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 127/297 (42%), Gaps = 21/297 (7%)
Query: 29 YNVAMKVFKKCK---DFEGAEKLFDEMLQRKLKPDNVTFATMINC-ARLCSMSDRAV--E 82
+NV V K C D E + +++ + D T ++N A+L M +
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGN 164
Query: 83 WFEKMPGFGCEP--DAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKM 140
F++MP + V T I + +D R+++ R D V+++ +I
Sbjct: 165 VFDEMPQRTSNSGDEDVKAETCIMPFG----IDSVRRVFEVMP----RKDVVSYNTIIAG 216
Query: 141 YGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPD 200
Y Y+ L + +M +KP+ T +++LP + K I+ + R GI D
Sbjct: 217 YAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSD 276
Query: 201 YITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFE 260
S+L+ Y ED+ ++ + R G++ N L++ G +EA+ +F
Sbjct: 277 VYIGSSLVDMYAKSARIEDSERVFSRLY-CRDGIS---WNSLVAGYVQNGRYNEALRLFR 332
Query: 261 DIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ ++ + +P FSS+I + A + + + ++ GF NIF+ + LV Y
Sbjct: 333 QMVTAKV-KPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMY 388
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 84/424 (19%), Positives = 170/424 (40%), Gaps = 36/424 (8%)
Query: 3 NSETAPVVLRYLRDKIKPTRGKELVLYNVA-------------MKVFKKCKDFEGAEKLF 49
+S T VL + + +GKE+ Y + + ++ K E +E++F
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 50 DEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARV 109
+ R D +++ +++ + A+ F +M +P AV ++VI A A +
Sbjct: 301 SRLYCR----DGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHL 356
Query: 110 ENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTY 169
+ + ++L+ + + SAL+ MY + ++D M VL + ++
Sbjct: 357 ATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVL----DEVSW 412
Query: 170 NTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREM-K 228
++ A ++EEMKR G+ P+ + + +L A L ++A G + M K
Sbjct: 413 TAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTK 472
Query: 229 ENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKV 288
+ ++ + + G L+EA + +P S +S+L++ S +
Sbjct: 473 VYGLNQELEHYAAVADLLGRAGKLEEAYNFISKM----CVEPTGSVWSTLLSSCSVHKNL 528
Query: 289 SEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCL 348
AE + E I + N+ + Y R G+ C
Sbjct: 529 ELAEK-VAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKP--ACSW 585
Query: 349 LNIMTKTPMEELG-KLIDCIEKANEELGSVVRYLVEGQEEGDQDFIKETSALLNSTDAEI 407
+ + KT G + ++K NE L +V+ + ++EG ++ +TS +L+ D E
Sbjct: 586 IEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQM---EKEG---YVADTSGVLHDVDEEH 639
Query: 408 KKPL 411
K+ L
Sbjct: 640 KREL 643
>AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2435007-2439344 REVERSE
LENGTH=821
Length = 821
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 105/220 (47%), Gaps = 7/220 (3%)
Query: 80 AVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIK 139
A++ EKM G A +++ A V D+ R++ T++ + +T F ++I+
Sbjct: 392 ALDVVEKMGEAGLMISADILHSLLHAIDEVLEFDLVRRIHSIMCTKSVKPNTENFRSIIR 451
Query: 140 MYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISP 199
+ ++D++ N+ ++K ++PN +N +L +R + A ++ ++MK G+ P
Sbjct: 452 LCTRIKDFEGAYNMLGNLKNFNLEPNSSMFNCILAGYFREKNVSSALMVVKQMKEAGVKP 511
Query: 200 DYITYSTLLRAYIGGYLREDALG-IYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEI 258
D IT+ L I +EDA+ Y EMK+ + T + L+ A G ++A ++
Sbjct: 512 DSITFGYL----INNCTQEDAITKYYEEMKQAGVQATKRIYMSLIDAYAASGKFEKAKQV 567
Query: 259 FEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEM 298
D I Q + S LI+ + K ++A + EM
Sbjct: 568 LVDPDVPAINQNELK--SVLISALASRGKWADALHIYEEM 605
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 94/230 (40%), Gaps = 18/230 (7%)
Query: 41 DFEGAEKLFDEMLQRKLKPDNVTFATMIN-CARLCSMSDRAVEWFEKMPGFGCEPDAVTC 99
+F+ ++ M + +KP+ F ++I C R+ + A + F EP++
Sbjct: 423 EFDLVRRIHSIMCTKSVKPNTENFRSIIRLCTRIKDF-EGAYNMLGNLKNFNLEPNSSMF 481
Query: 100 ATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKV 159
++ Y R +NV A + + K + D++TF LI D Y++MK
Sbjct: 482 NCILAGYFREKNVSSALMVVKQMKEAGVKPDSITFGYLI---NNCTQEDAITKYYEEMKQ 538
Query: 160 LGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITY------STLLRAYIG 213
GV+ Y +L+ A + K +E+ K+ + PD S L+ A
Sbjct: 539 AGVQATKRIYMSLIDAYAASGK-------FEKAKQVLVDPDVPAINQNELKSVLISALAS 591
Query: 214 GYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIK 263
DAL IY EM++ V L+ G L V++ +D++
Sbjct: 592 RGKWADALHIYEEMRKAECHVDPKSIISLIEYSDSKGELSTLVQLADDLQ 641
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 127/285 (44%), Gaps = 22/285 (7%)
Query: 35 VFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEP 94
++ + + AEK+FD M R L V ++T+++ +A+ F+ M G EP
Sbjct: 145 MYGQTGNLSDAEKVFDGMPVRDL----VAWSTLVSSCLENGEVVKALRMFKCMVDDGVEP 200
Query: 95 DAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVY 154
DAVT +V+ A + + +A ++ + + + LD ++L+ MY D ++
Sbjct: 201 DAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIF 260
Query: 155 DDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYIT-YSTLLRAYIG 213
+ + K N ++ ++ + R A + EM ++GI P+ +T YS L +
Sbjct: 261 EKI----AKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLI 316
Query: 214 GYLRE----DALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQ 269
G +RE + RE+ N +++ L L A+ G L + + + I
Sbjct: 317 GLIREGKSVHGFAVRRELDPNYESLSLALVELY----AECGKLSDCETVLRVVSDRNIV- 371
Query: 270 PDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
++SLI++Y+ V +A + +M+ KP+ F + +
Sbjct: 372 ----AWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSI 412
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 122/262 (46%), Gaps = 12/262 (4%)
Query: 59 PDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYA-RVENVDMAER 117
PD+ + +I C C + D A++ + ++ + +V+ A A E++ + +
Sbjct: 63 PDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGK 122
Query: 118 LYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVY 177
++ R D V ++L+ MYG + V+D M V +L ++TL+ +
Sbjct: 123 VHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPV----RDLVAWSTLVSSCL 178
Query: 178 RARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIG-GYLREDALGIYREMKENRIGVTV 236
+ + A +++ M +G+ PD +T +++ G LR A ++ ++ +
Sbjct: 179 ENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLR-IARSVHGQITRKMFDLDE 237
Query: 237 DLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLN 296
LCN LL+M + G L + IFE I + + +++++I+ Y+ +A +
Sbjct: 238 TLCNSLLTMYSKCGDLLSSERIFEKIA-----KKNAVSWTAMISSYNRGEFSEKALRSFS 292
Query: 297 EMIESGFKPNIFVITPLVKCYG 318
EMI+SG +PN+ + ++ G
Sbjct: 293 EMIKSGIEPNLVTLYSVLSSCG 314
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/423 (17%), Positives = 160/423 (37%), Gaps = 103/423 (24%)
Query: 28 LYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKM 87
L N + ++ KC D +E++F+++ K + V++ MI+ S++A+ F +M
Sbjct: 239 LCNSLLTMYSKCGDLLSSERIFEKIA----KKNAVSWTAMISSYNRGEFSEKALRSFSEM 294
Query: 88 PGFGCEPDAVTCATVI-----------------FAYAR-----VENVDMA--------ER 117
G EP+ VT +V+ FA R E++ +A +
Sbjct: 295 IKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGK 354
Query: 118 LYD-----RAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTL 172
L D R ++ + V +++LI +Y Q L ++ M +KP+ T +
Sbjct: 355 LSDCETVLRVVSDR---NIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASS 411
Query: 173 LPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRI 232
+ A A L K I+ + R +S +++ ++L+ Y + A ++ ++K +
Sbjct: 412 ISACENAGLVPLGKQIHGHVIRTDVSDEFVQ-NSLIDMYSKSGSVDSASTVFNQIKHRSV 470
Query: 233 -------------GVTVDLCNL------------------LLSMCADVGFLDEAVEIFED 261
G +V+ +L ++ C+ +G L++ +
Sbjct: 471 VTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHK 530
Query: 262 IKSSGI------------------YQPDESTFSSL-----------ITVYSCFAKVSEAE 292
+ SG+ E+ F ++ I Y ++ A
Sbjct: 531 LIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAI 590
Query: 293 AMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIM 352
+ N+M+ESG KPN V ++ G +G+ P+ C ++++
Sbjct: 591 STFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLL 650
Query: 353 TKT 355
+++
Sbjct: 651 SRS 653
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 134/294 (45%), Gaps = 25/294 (8%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMIN-CARLCSMS-DRAVEWFEK 86
+NV + + K + FE + M+ + ++PD T+ +++ C ++ R V +
Sbjct: 112 WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIE 171
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED 146
+ + + C +I Y R N+ +A RL+DR + D V+++A+I Y
Sbjct: 172 VSSY--KSSLYVCNALISMYKRFRNMGIARRLFDRM----FERDAVSWNAVINCYASEGM 225
Query: 147 YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYST 206
+ + ++D M GV+ ++ T+N + + + A + M+ S D +
Sbjct: 226 WSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMII 285
Query: 207 LLRA--YIGGYLREDALGIYREMKENRIGVTVD----LCNLLLSMCADVGFLDEAVEIFE 260
L+A IG A+ + +E+ I + D + N L++M + L A+ +F
Sbjct: 286 GLKACSLIG------AIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFR 339
Query: 261 DIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
+ + + T++S+I+ Y+ K EA +L EM+ +GF+PN + ++
Sbjct: 340 QTEENSL-----CTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASIL 388
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 120/253 (47%), Gaps = 14/253 (5%)
Query: 30 NVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPG 89
N + ++ KCKD A +F + + L T+ ++I+ + S+ A +M
Sbjct: 319 NTLITMYSKCKDLRHALIVFRQTEENSL----CTWNSIISGYAQLNKSEEASHLLREMLV 374
Query: 90 FGCEPDAVTCATVIFAYARVENVDMAERLYDRA-KTENWRLDTVTFSALIKMYGMLEDYD 148
G +P+++T A+++ AR+ N+ + + + + ++ T+ +++L+ +Y
Sbjct: 375 AGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIV 434
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
V D M K + TY +L+ + +A +++EM R+GI PD++T +L
Sbjct: 435 AAKQVSDLMS----KRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVL 490
Query: 209 RAYIGGYLREDALGIYREMK-ENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGI 267
A L + ++ +M+ E I + + ++ + GFL +A +I ++
Sbjct: 491 SACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMP---- 546
Query: 268 YQPDESTFSSLIT 280
Y+P +T+++L+
Sbjct: 547 YKPSGATWATLLN 559
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 129/330 (39%), Gaps = 52/330 (15%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
L + N + ++K+ ++ A +LFD M +R D V++ +INC M A E F
Sbjct: 178 SLYVCNALISMYKRFRNMGIARRLFDRMFER----DAVSWNAVINCYASEGMWSEAFELF 233
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTF---------- 134
+KM G E +T + + N A L R + LD V
Sbjct: 234 DKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLI 293
Query: 135 -------------------------SALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTY 169
+ LI MY +D L V+ + + +L T+
Sbjct: 294 GAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTE----ENSLCTW 349
Query: 170 NTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLR--AYIGGYLREDALGIYREM 227
N+++ + K A + EM G P+ IT +++L A I Y
Sbjct: 350 NSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILR 409
Query: 228 KENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAK 287
++ T+ L N L+ + A G + A ++ D+ S + DE T++SLI Y +
Sbjct: 410 RKCFKDYTM-LWNSLVDVYAKSGKIVAAKQV-SDLMS----KRDEVTYTSLIDGYGNQGE 463
Query: 288 VSEAEAMLNEMIESGFKP-NIFVITPLVKC 316
A A+ EM SG KP ++ V+ L C
Sbjct: 464 GGVALALFKEMTRSGIKPDHVTVVAVLSAC 493
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 126/292 (43%), Gaps = 27/292 (9%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSD---RA 80
+ +V + + + + D A LF++M +R + N A C+ + A
Sbjct: 191 RNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAA-------CTQNGLFLEA 243
Query: 81 VEWFEKMPGF-GCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIK 139
V F +M P+ VT V+ A A+ + +A+ ++ A + D ++L+
Sbjct: 244 VSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVD 303
Query: 140 MYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKR---NG 196
+YG + ++ +V+ + K +L +N+++ + A ++EEM + N
Sbjct: 304 LYGKCGNLEEASSVFK----MASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNIND 359
Query: 197 ISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGV--TVDLCNLLLSMCADVGFLDE 254
I PD+IT+ LL A G L G Y ++ NR G+ ++ L+ + G DE
Sbjct: 360 IKPDHITFIGLLNACTHGGLVSKGRG-YFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDE 418
Query: 255 AVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
A+E+ +K + DE+ + SL+ + AE + ++ PN
Sbjct: 419 ALEVMSTMK----MKADEAIWGSLLNACKIHGHLDLAEVAVKNLV--ALNPN 464
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 162/407 (39%), Gaps = 75/407 (18%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFA-TMINCARL----------CSMS 77
+N ++ F ++ E + ++ +ML+ L PD++T+ M + +RL CS+
Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVV 135
Query: 78 DRAVEW------------------------FEKMPGFGCEPDAVTCATVIFAYARVENVD 113
+EW F++MP + VT +++ AYA+ +V
Sbjct: 136 KSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMP----HKNLVTWNSILDAYAKSGDVV 191
Query: 114 MAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGV-KPNLGTYNTL 172
A ++D D VT+S++I Y +Y++ L ++D M +G K N T ++
Sbjct: 192 SARLVFDEMSER----DVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSV 247
Query: 173 LPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRI 232
+ A K ++ + + I ++L+ Y DA ++
Sbjct: 248 ICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKET 307
Query: 233 GVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAE 292
+ N ++ A GF+ E++++F ++ S I PDE TF L+ S V EA
Sbjct: 308 DAL--MWNAIIGGLASHGFIRESLQLFHKMRESKI-DPDEITFLCLLAACSHGGLVKEAW 364
Query: 293 AMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIM 352
+ ESG +P +V G+V D H + +
Sbjct: 365 HFFKSLKESGAEPKSEHYACMVDVLSRA----------------GLVKDAH------DFI 402
Query: 353 TKTPMEELGKLI-----DCIEKANEELGSVV-RYLVEGQEEGDQDFI 393
++ P++ G ++ CI N EL V + L+E Q D ++
Sbjct: 403 SEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYV 449
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 7/208 (3%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEW 83
K LV +N + + K D A +FDEM +R D VT+++MI+ ++A+E
Sbjct: 172 KNLVTWNSILDAYAKSGDVVSARLVFDEMSER----DVVTWSSMIDGYVKRGEYNKALEI 227
Query: 84 FEKMPGFGC-EPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG 142
F++M G + + VT +VI A A + ++ + ++ + L + ++LI MY
Sbjct: 228 FDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYA 287
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
+V+ V + + +N ++ + + ++ +M+ + I PD I
Sbjct: 288 KCGSIGDAWSVFYRASV--KETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEI 345
Query: 203 TYSTLLRAYIGGYLREDALGIYREMKEN 230
T+ LL A G L ++A ++ +KE+
Sbjct: 346 TFLCLLAACSHGGLVKEAWHFFKSLKES 373
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 111/279 (39%), Gaps = 33/279 (11%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
+N ++V + KD + L ++ + D TF+ + + A+ F+ +
Sbjct: 106 FNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILD 165
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
F C D T +I A +V A + K + + +L+ + + +
Sbjct: 166 KFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVK 225
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRN--GISPDYITYST 206
+ V DMK G+ P+L +N+LL L + RN G+ P
Sbjct: 226 EARRVIQDMKSAGITPDLFCFNSLLTC-----------LCERNVNRNPSGLVP------- 267
Query: 207 LLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSG 266
+AL I EM+ +I T N+LLS + E+ +I E +K SG
Sbjct: 268 ------------EALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSG 315
Query: 267 IYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKP 305
PD ++ ++ V + + +++EMIE GF+P
Sbjct: 316 C-DPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRP 353
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 105/232 (45%), Gaps = 11/232 (4%)
Query: 30 NVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKM-P 88
N + ++ KC+ A ++F E+ K D V++ +MI+ C S A++ F M
Sbjct: 243 NALIDMYVKCEQLSDAMRVFGELE----KKDKVSWNSMISGLVHCERSKEAIDLFSLMQT 298
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
G +PD +V+ A A + VD +++ T + DT +A++ MY +
Sbjct: 299 SSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIE 358
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
L +++ ++ N+ T+N LL + L + +EEM + G P+ +T+ L
Sbjct: 359 TALEIFNGIR----SKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAAL 414
Query: 209 RAYIGGYLREDALGIYREMKENRIGV--TVDLCNLLLSMCADVGFLDEAVEI 258
A L ++ + +MK + ++ ++ + G LDEA+E+
Sbjct: 415 NACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALEL 466
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 125/284 (44%), Gaps = 17/284 (5%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++ + N + + C + A K+F EM R D V++ +I + A++ F
Sbjct: 140 DIYVQNSLVHFYGVCGESRNACKVFGEMPVR----DVVSWTGIITGFTRTGLYKEALDTF 195
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
KM EP+ T V+ + RV + + + ++ + T +ALI MY
Sbjct: 196 SKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKC 252
Query: 145 EDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMK-RNGISPDYIT 203
E + V+ +++ K + ++N+++ + + A ++ M+ +GI PD
Sbjct: 253 EQLSDAMRVFGELE----KKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHI 308
Query: 204 YSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIK 263
+++L A + ++ + I + ++ M A G+++ A+EIF I+
Sbjct: 309 LTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIR 368
Query: 264 SSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNI 307
S ++ T+++L+ + E+ EM++ GFKPN+
Sbjct: 369 SKNVF-----TWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNL 407
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 126/260 (48%), Gaps = 19/260 (7%)
Query: 51 EMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVE 110
E+ R P V++ M++ + + A+E F++M G E + T +VI A R
Sbjct: 306 EVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPS 365
Query: 111 NVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYN 170
V A +++ + LD+ +ALI MY D D V++D+ + + N+ N
Sbjct: 366 MVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQ-RQNI--VN 422
Query: 171 TLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKEN 230
++ + +++KP A ++ M + G+ D + +LL D L + +++
Sbjct: 423 VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVL-------DCLNLGKQVHGY 475
Query: 231 RI--GVTVDLC--NLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFA 286
+ G+ +DL + L ++ + G L+E+ ++F+ GI D + ++S+I+ ++ +
Sbjct: 476 TLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQ-----GIPFKDNACWASMISGFNEYG 530
Query: 287 KVSEAEAMLNEMIESGFKPN 306
+ EA + +EM++ G P+
Sbjct: 531 YLREAIGLFSEMLDDGTSPD 550
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 136/336 (40%), Gaps = 22/336 (6%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
+L + + ++ KC E + KLF + + DN +A+MI+ A+ F
Sbjct: 484 DLTVGSSLFTLYSKCGSLEESYKLFQGIPFK----DNACWASMISGFNEYGYLREAIGLF 539
Query: 85 EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGML 144
+M G PD T A V+ + ++ + ++ SAL+ MY
Sbjct: 540 SEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKC 599
Query: 145 EDYDQCLNVYDDMKVLGVKPNLG--TYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
VYD + P L + ++L+ + L++ +M +G + D
Sbjct: 600 GSLKLARQVYDRL------PELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSF 653
Query: 203 TYSTLLRAYIGGYLREDALGIYREMKENRIGVTVD--LCNLLLSMCADVGFLDEAVEIFE 260
S++L+A E +LG +IG+ + + + LL+M + G +D+ + F
Sbjct: 654 AISSILKA--AALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFS 711
Query: 261 DIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN-IFVITPLVKCYGX 319
I PD +++LI Y+ K +EA + N M E GFKP+ + + L C
Sbjct: 712 QING-----PDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHG 766
Query: 320 XXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKT 355
D+GI P+ C+++ + ++
Sbjct: 767 GLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRS 802
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 138/336 (41%), Gaps = 22/336 (6%)
Query: 45 AEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIF 104
A KLFD + Q PD V+ MI+ + + + ++ +F KM G E + ++ +VI
Sbjct: 103 AAKLFDTIPQ----PDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVIS 158
Query: 105 AYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKP 164
A + ++ +E + + V SALI ++ ++ V+ D +
Sbjct: 159 ACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRD----SLSA 214
Query: 165 NLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIY 224
N+ +NT++ R + ++ EM PD TYS++L A L + G
Sbjct: 215 NVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACAS--LEKLRFGKV 272
Query: 225 REMKENRIGVT-VDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYS 283
+ + + G V +C ++ + A G + EA+E+F S I P +++ +++ Y+
Sbjct: 273 VQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVF-----SRIPNPSVVSWTVMLSGYT 327
Query: 284 CFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGH 343
A + EM SG + N +T ++ G G D
Sbjct: 328 KSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSS 387
Query: 344 CCCCLLNIMTKTPMEELGKLIDCIEKANEELGSVVR 379
L+++ +K+ ID E+ E+L + R
Sbjct: 388 VAAALISMYSKSGD------IDLSEQVFEDLDDIQR 417
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 110/265 (41%), Gaps = 13/265 (4%)
Query: 28 LYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKM 87
+YN + K F GA L M+++ LKPD T+A ++N A E+ ++M
Sbjct: 184 VYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEM 243
Query: 88 PGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDY 147
G P A +I ++ A+ + + + D TF+ LI+ +
Sbjct: 244 SRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEV 303
Query: 148 DQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTL 207
+ C+ +Y LG+ ++ TY TL+PAV + K A + +G P Y+ +
Sbjct: 304 EFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPI 363
Query: 208 LRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVG-FLDEAVEIFEDIKSSG 266
++ + +DA + +MK + +L++MC G F+D A +
Sbjct: 364 IKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLV------- 416
Query: 267 IYQPDESTFSSLITVYSCFAKVSEA 291
E T L+ + CF V++
Sbjct: 417 -----EMTEMGLVPISRCFDMVTDG 436
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 110/289 (38%), Gaps = 39/289 (13%)
Query: 63 TFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRA 122
F + +R + S R W P + P ++ + + A + + ++ +
Sbjct: 80 VFRVLRATSRSSNDSLRFFNWARSNPSY--TPTSMEYEELAKSLASHKKYESMWKILKQM 137
Query: 123 KTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDM-KVLGVKPNLGTYNTLLPAVYRARK 181
K + + T +I+ YG DQ + +++ + K LG + + YN+LL A+ +
Sbjct: 138 KDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKM 197
Query: 182 PLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNL 241
A + M R G+ PD TY+ L+ + ++A EM +L
Sbjct: 198 FHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDL 257
Query: 242 LLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFS------------------------- 276
L+ + G+L+ A E+ + G + PD TF+
Sbjct: 258 LIEGLLNAGYLESAKEMVSKMTKGG-FVPDIQTFNILIEAISKSGEVEFCIEMYYTACKL 316
Query: 277 ----------SLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
+LI S K+ EA +LN +E G KP + P++K
Sbjct: 317 GLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIK 365
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 125/286 (43%), Gaps = 37/286 (12%)
Query: 64 FATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAK 123
+ TM++ A D E +M GC+ D T +I Y + + + ++++ +
Sbjct: 192 YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMR 251
Query: 124 TENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPL 183
+ LD ++ +I+ + D L Y +M G+ L TY LL + ++ K
Sbjct: 252 KSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVD 311
Query: 184 LAKLIYEEMKRNGISPDYITYSTLLRAY-IGGYLREDALGIYREMKE------------- 229
+ + I ++M R ++ + LL+++ + G ++E AL + RE+K
Sbjct: 312 VVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKE-ALELIRELKNKEMCLDAKYFEIL 370
Query: 230 -------NRIGVTVDLCNLLLSMCAD---------VGFLDE-----AVEIFEDIKSSGIY 268
NR+ +++ +++ D G+L + A+E FE IK SG
Sbjct: 371 VKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSG-R 429
Query: 269 QPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
P ST++ ++ + + + NEMIE+G +P+ IT +V
Sbjct: 430 PPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVV 475
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 128/323 (39%), Gaps = 22/323 (6%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
YN+++KV KDF+ LF EM ++ T+A MI +++ A+ F++M
Sbjct: 681 YNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMK 740
Query: 89 GFGCEPDAVT--CATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMY----- 141
G P + T C + + NV+ A R + E R V L++ Y
Sbjct: 741 DMGLIPSSSTFKCLITVLCEKKGRNVEEATRTF----REMIRSGFVPDRELVQDYLGCLC 796
Query: 142 --GMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARK--PLLAKLIYEEMKRNGI 197
G +D CL D + +G P Y+ + A+ R K L++L E +R+ +
Sbjct: 797 EVGNTKDAKSCL---DSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLL 852
Query: 198 SPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVE 257
D TY +++ + + AL MKE V + L+ L++ +E
Sbjct: 853 --DQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLE 910
Query: 258 IFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
+ ++ +P T++++I Y KV EA M E G P+ + + C
Sbjct: 911 TCQKMEGESC-EPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCL 969
Query: 318 GXXXXXXXXXXXXXRGLDWGIVP 340
LD GI P
Sbjct: 970 CQACKSEDALKLLSEMLDKGIAP 992
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 70/151 (46%), Gaps = 1/151 (0%)
Query: 130 DTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIY 189
D+ + +I Y D + L ++ +K G P + TY ++ +++ ++ ++
Sbjct: 397 DSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLF 456
Query: 190 EEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADV 249
EM NGI PD + + ++ ++G +A ++ M+E I T ++ +
Sbjct: 457 NEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRS 516
Query: 250 GFLDEAVEIFEDIKSSGIYQPDESTFSSLIT 280
DE ++IF + +S I D+ FS +I+
Sbjct: 517 SRYDEIIKIFNQMHASKIVIRDD-IFSWVIS 546
>AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:338538-339905 FORWARD
LENGTH=409
Length = 409
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 1/206 (0%)
Query: 93 EPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLN 152
E +A +I Y ++ V+ AER K + +D VT +A++++Y +
Sbjct: 162 EANARDYTKIIHYYGKLNQVEDAERTLLSMKNRGFLIDQVTLTAMVQLYSKAGCHKLAEE 221
Query: 153 VYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYI 212
++++K+LG + +Y +++ A RA P + + EM I Y LLR Y
Sbjct: 222 TFNEIKLLGEPLDYRSYGSMIMAYIRAGVPEKGESLLREMDSQEICAGREVYKALLRDYS 281
Query: 213 GGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDE 272
G E A ++ ++ I V LC LL++ + G A FE+++ +GI D+
Sbjct: 282 MGGDAEGAKRVFDAVQIAGITPDVKLCGLLINAYSVSGQSQNARLAFENMRKAGIKATDK 341
Query: 273 STFSSLITVYSCFAKVSEAEAMLNEM 298
+ ++ Y K++EA L E+
Sbjct: 342 CV-ALVLAAYEKEEKLNEALGFLVEL 366
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 100/242 (41%), Gaps = 1/242 (0%)
Query: 29 YNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMP 88
Y + + K E AE+ M R D VT M+ A E F ++
Sbjct: 168 YTKIIHYYGKLNQVEDAERTLLSMKNRGFLIDQVTLTAMVQLYSKAGCHKLAEETFNEIK 227
Query: 89 GFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYD 148
G D + ++I AY R + E L ++ + AL++ Y M D +
Sbjct: 228 LLGEPLDYRSYGSMIMAYIRAGVPEKGESLLREMDSQEICAGREVYKALLRDYSMGGDAE 287
Query: 149 QCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLL 208
V+D +++ G+ P++ L+ A + + A+L +E M++ GI + +L
Sbjct: 288 GAKRVFDAVQIAGITPDVKLCGLLINAYSVSGQSQNARLAFENMRKAGIKATDKCVALVL 347
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIY 268
AY +ALG E++++ I + + +L +G ++E VE+ SS
Sbjct: 348 AAYEKEEKLNEALGFLVELEKDSIMLGKEASAVLAQWFKKLGVVEE-VELLLREFSSSQS 406
Query: 269 QP 270
QP
Sbjct: 407 QP 408
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 147/331 (44%), Gaps = 51/331 (15%)
Query: 25 ELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWF 84
++ L NV + + KC E A ++FD ML+R L V++ TMI M A++ F
Sbjct: 95 DVTLLNVLINAYSKCGFVELARQVFDGMLERSL----VSWNTMIGLYTRNRMESEALDIF 150
Query: 85 EKM--PGF--------------GCEPDAVTC-------------------ATVIFAYARV 109
+M GF G DA+ C ++ YA+
Sbjct: 151 LEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKC 210
Query: 110 ENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTY 169
+ A ++++ + ++ +VT+S+++ Y ++Y++ L +Y + + ++ N T
Sbjct: 211 GMIKDAVQVFESMQDKS----SVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTL 266
Query: 170 NTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIG-GYLREDALGIYREMK 228
++++ A + K ++ + ++G + S+ + Y G LRE + I+ E++
Sbjct: 267 SSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYI-IFSEVQ 325
Query: 229 ENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKV 288
E + +L N ++S A E + +FE ++ G++ P+E TFSSL++V V
Sbjct: 326 EKNL----ELWNTIISGFAKHARPKEVMILFEKMQQDGMH-PNEVTFSSLLSVCGHTGLV 380
Query: 289 SEAEAMLNEMIES-GFKPNIFVITPLVKCYG 318
E M + G PN+ + +V G
Sbjct: 381 EEGRRFFKLMRTTYGLSPNVVHYSCMVDILG 411
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 116/260 (44%), Gaps = 42/260 (16%)
Query: 74 CSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVT 133
C M AV+ FE M + +VT ++++ Y + +N + A LY RA+ + + T
Sbjct: 210 CGMIKDAVQVFESMQ----DKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFT 265
Query: 134 FSALI-------------KMYGML----------------EDYDQCLNVYDDMKVLG--V 162
S++I +M+ ++ + Y +C ++ + +
Sbjct: 266 LSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQ 325
Query: 163 KPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALG 222
+ NL +NT++ + +P +++E+M+++G+ P+ +T+S+LL L E+
Sbjct: 326 EKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRR 385
Query: 223 IYREMKENRIGVTVDLCNL--LLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLIT 280
++ M+ G++ ++ + ++ + G L EA E+ + I + P S + SL+
Sbjct: 386 FFKLMRTT-YGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIP----FDPTASIWGSLLA 440
Query: 281 VYSCFAKVSEAEAMLNEMIE 300
+ + AE ++ E
Sbjct: 441 SCRVYKNLELAEVAAEKLFE 460
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 127/291 (43%), Gaps = 7/291 (2%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEK 86
V+YN + D EGA + +M + ++ D T A ++ AVE+ +
Sbjct: 362 VIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQ 421
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLED 146
+ D V T++ + R + + A+++ + LD ++F LI Y
Sbjct: 422 ISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGK 481
Query: 147 YDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYST 206
++ L +YD M + NL YN+++ + + A+ + M+ D +TY+T
Sbjct: 482 LERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAME----IKDIVTYNT 537
Query: 207 LLRAYIGGYLREDALGIYREMKENRIGVTVDLC--NLLLSMCADVGFLDEAVEIFEDIKS 264
LL + E+A I +M++ +V L N++++ G ++A E+ + +
Sbjct: 538 LLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVE 597
Query: 265 SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
G+ PD T+ +LIT +S + + + +I G P+ + +V+
Sbjct: 598 RGVV-PDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVR 647
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 131/294 (44%), Gaps = 12/294 (4%)
Query: 29 YNVAMKVF-KKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDR--AVEWFE 85
+N+ + F K+ K FE A +F ML+ + P+ V+F MI+ A C D A++
Sbjct: 221 FNLVIYSFCKESKLFE-ALSVFYRMLKCGVWPNVVSFNMMIDGA--CKTGDMRFALQLLG 277
Query: 86 KM---PGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG 142
KM G P+AVT +VI + + +D+AER+ + T+ AL+ YG
Sbjct: 278 KMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYG 337
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
D+ L + D+M G+ N YN+++ ++ A + +M + D
Sbjct: 338 RAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRF 397
Query: 203 TYSTLLRAYI-GGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFED 261
T + ++R GY++E A+ R++ E ++ + N L+ L A +I
Sbjct: 398 TQAIVVRGLCRNGYVKE-AVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGS 456
Query: 262 IKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVK 315
+ G+ D +F +LI Y K+ A + + MI+ N+ + +V
Sbjct: 457 MLVQGL-SLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVN 509
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/352 (19%), Positives = 137/352 (38%), Gaps = 38/352 (10%)
Query: 27 VLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEK 86
V YN + F K + AE++ +M++ + + T+ +++ SD A+ ++
Sbjct: 292 VTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDE 351
Query: 87 MPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIK---MYGM 143
M G + V ++++ +++ A + ++N ++D T + +++ G
Sbjct: 352 MTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGY 411
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYIT 203
+++ + + K++ ++ +NTL+ R +K A I M G+S D I+
Sbjct: 412 VKEAVEFQRQISEKKLV---EDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAIS 468
Query: 204 YSTLLRAYIGGYLREDALGIYREM-KENRIGVTV-------------------------- 236
+ TL+ Y+ E AL IY M K N+ V
Sbjct: 469 FGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAME 528
Query: 237 --DLC--NLLLSMCADVGFLDEAVEIFEDI-KSSGIYQPDESTFSSLITVYSCFAKVSEA 291
D+ N LL+ G ++EA +I + K G TF+ +I F +A
Sbjct: 529 IKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKA 588
Query: 292 EAMLNEMIESGFKPNIFVITPLVKCYGXXXXXXXXXXXXXRGLDWGIVPDGH 343
+ +L M+E G P+ L+ + + G+ P H
Sbjct: 589 KEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEH 640
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 129/314 (41%), Gaps = 38/314 (12%)
Query: 35 VFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEP 94
++ KC+ A K+FD M +R L V++ T++ M+ A+E + M +P
Sbjct: 179 MYAKCRQVNEARKVFDRMPERDL----VSWNTIVAGYSQNGMARMALEMVKSMCEENLKP 234
Query: 95 DAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVY 154
+T +V+ A + + + + + ++ A + +AL+ MY + ++
Sbjct: 235 SFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLF 294
Query: 155 DDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGG 214
D M ++ N+ ++N+++ A + P A LI+++M G+ P ++ L A
Sbjct: 295 DGM----LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADL 350
Query: 215 YLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKS---------- 264
E I++ E + V + N L+SM +D A +F ++S
Sbjct: 351 GDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMI 410
Query: 265 --------------------SGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFK 304
S +PD T+ S+IT + + A+ + ++ S
Sbjct: 411 LGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLD 470
Query: 305 PNIFVITPLVKCYG 318
N+FV T LV Y
Sbjct: 471 KNVFVTTALVDMYA 484
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 99/233 (42%), Gaps = 9/233 (3%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEW 83
+ + + N + ++ KCK+ + A +F ++ R L N R A+ +
Sbjct: 370 RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPID----ALNY 425
Query: 84 FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGM 143
F +M +PD T +VI A A + A+ ++ + +AL+ MY
Sbjct: 426 FSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAK 485
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYIT 203
++D M + ++ T+N ++ A ++EEM++ I P+ +T
Sbjct: 486 CGAIMIARLIFDMMS----ERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVT 541
Query: 204 YSTLLRAYIGGYLREDALGIYREMKEN-RIGVTVDLCNLLLSMCADVGFLDEA 255
+ +++ A L E L + MKEN I +++D ++ + G L+EA
Sbjct: 542 FLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEA 594
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 108/257 (42%), Gaps = 10/257 (3%)
Query: 61 NVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYD 120
NV + TM+ S D+A+++F +M EP ++ + + + ++
Sbjct: 100 NVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 121 RAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRAR 180
+ LD + L MY ++ V+D M + +L ++NT++ +
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP----ERDLVSWNTIVAGYSQNG 215
Query: 181 KPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCN 240
+A + + M + P +IT ++L A L I+ + V++
Sbjct: 216 MARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIST 275
Query: 241 LLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIE 300
L+ M A G L+ A ++F+ G+ + + +++S+I Y EA + +M++
Sbjct: 276 ALVDMYAKCGSLETARQLFD-----GMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD 330
Query: 301 SGFKP-NIFVITPLVKC 316
G KP ++ V+ L C
Sbjct: 331 EGVKPTDVSVMGALHAC 347
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 131/297 (44%), Gaps = 25/297 (8%)
Query: 22 RGKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAV 81
R + +V + + +++ + A KLF+ M ++ V++ +M+ L + A
Sbjct: 199 RERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKT----EVSWTSMLLGYTLSGRIEDAE 254
Query: 82 EWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMY 141
E+FE MP +P + C +I + V + A R++D + D T+ +IK Y
Sbjct: 255 EFFEVMP---MKP-VIACNAMIVGFGEVGEISKARRVFDLMEDR----DNATWRGMIKAY 306
Query: 142 GMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDY 201
+ L+++ M+ GV+P+ + ++L + ++ + R D
Sbjct: 307 ERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDV 366
Query: 202 ITYSTLLRAYIG-GYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFE 260
S L+ Y+ G L + L R ++ I + N ++S A G +EA++IF
Sbjct: 367 YVASVLMTMYVKCGELVKAKLVFDRFSSKDII-----MWNSIISGYASHGLGEEALKIFH 421
Query: 261 DIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCY 317
++ SSG P++ T +++T S K+ E + M + F +TP V+ Y
Sbjct: 422 EMPSSGT-MPNKVTLIAILTACSYAGKLEEGLEIFESM------ESKFCVTPTVEHY 471
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 129/293 (44%), Gaps = 15/293 (5%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEW 83
K+L + + A+ ++ + D E + ++FD ++R ++ N + L ++E
Sbjct: 249 KDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLV----ESIEL 304
Query: 84 F-EKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYG 142
F E + D VT A + ++ V++ + + L V ++L+ MY
Sbjct: 305 FLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYS 364
Query: 143 MLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYI 202
+ V+ M+ + ++ ++NT++ A + ++ EM++ G DYI
Sbjct: 365 RCGSVHKSFGVFLSMR----ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYI 420
Query: 203 TYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCN-LLLSMCADVGFLDEAVEIFED 261
T + LL A LR +G R G+ + N L+ M + G + + ++FE
Sbjct: 421 TVTALLSA--ASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFE- 477
Query: 262 IKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLV 314
SG + D++T++S+I+ Y+ + + +M+E +PN + ++
Sbjct: 478 --GSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASIL 528
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 96/208 (46%), Gaps = 5/208 (2%)
Query: 60 DNVTFATMINCARLCSMSDRAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLY 119
D T+ +MI+ +++ F KM P+AVT A+++ A +++ +VD+ ++L+
Sbjct: 485 DQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLH 544
Query: 120 DRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRA 179
+ + + SAL+ MY + +DM + N TY T++ +
Sbjct: 545 GFSIRQYLDQNVFVASALVDMYSKA----GAIKYAEDMFSQTKERNSVTYTTMILGYGQH 600
Query: 180 RKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKE-NRIGVTVDL 238
A ++ M+ +GI PD IT+ +L A L ++ L I+ EM+E I + +
Sbjct: 601 GMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEH 660
Query: 239 CNLLLSMCADVGFLDEAVEIFEDIKSSG 266
+ M VG ++EA E + + G
Sbjct: 661 YCCITDMLGRVGRVNEAYEFVKGLGEEG 688
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 186/434 (42%), Gaps = 36/434 (8%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMIN-CARLCSMS-DRAV 81
K++V +N + + + +++ A +LF +M++ ++PD T T+++ CA+ S+ R V
Sbjct: 229 KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV 288
Query: 82 EWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMY 141
+ GFG V +I Y++ ++ A L++R + D ++++ LI Y
Sbjct: 289 HLWIDDHGFGSNLKIVN--ALIDLYSKCGELETACGLFERLPYK----DVISWNTLIGGY 342
Query: 142 GMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLI--YEEMKRNGISP 199
+ Y + L ++ +M G PN T ++LPA + + I Y + + G++
Sbjct: 343 THMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVT- 401
Query: 200 DYITYSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIF 259
S+L + I Y + + ++ + + ++ N ++ A G D + ++F
Sbjct: 402 ---NASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLF 458
Query: 260 EDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPNIFVITPLVKCYG- 318
++ GI QPD+ TF L++ S + + M + + +TP ++ YG
Sbjct: 459 SRMRKIGI-QPDDITFVGLLSACSHSGMLDLGRHIFRTMTQD------YKMTPKLEHYGC 511
Query: 319 ---XXXXXXXXXXXXXRGLDWGIVPDGHCCCCLLNIMTKTPMEELGKLI--DCIEKANEE 373
+ PDG C LL ELG+ + I+ E
Sbjct: 512 MIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPEN 571
Query: 374 LGSVVRYLVEGQEEGDQDFIKETSALLNSTDAEIKK-PLCNCL-IDLCVYL-----NLPN 426
GS V G + + +T ALLN D +KK P C+ + ID V+
Sbjct: 572 PGSYVLLSNIYASAGRWNEVAKTRALLN--DKGMKKVPGCSSIEIDSVVHEFIIGDKFHP 629
Query: 427 RARELFDLGSTLEI 440
R RE++ + +E+
Sbjct: 630 RNREIYGMLEEMEV 643
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 129/285 (45%), Gaps = 15/285 (5%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEW 83
+++V Y +K + E A+KLFDE+ + D V++ MI+ A+E
Sbjct: 198 RDVVSYTALIKGYASRGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALEL 253
Query: 84 FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGM 143
F+ M PD T TV+ A A+ ++++ +++ + + +ALI +Y
Sbjct: 254 FKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSK 313
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYIT 203
+ + +++ + V ++NTL+ A L+++EM R+G +P+ +T
Sbjct: 314 CGELETACGLFERLPYKDVI----SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 369
Query: 204 YSTLLR--AYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFED 261
++L A++G + +Y + + + L L+ M A G ++ A ++F
Sbjct: 370 MLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 429
Query: 262 IKSSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGFKPN 306
I + S+++++I ++ + + + + M + G +P+
Sbjct: 430 ILHKSL-----SSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPD 469
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 97/213 (45%), Gaps = 16/213 (7%)
Query: 23 GKELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVE 82
G L + N + ++ KC + E A LF+ + + D +++ T+I ++ A+
Sbjct: 298 GSNLKIVNALIDLYSKCGELETACGLFERLPYK----DVISWNTLIGGYTHMNLYKEALL 353
Query: 83 WFEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVT-----FSAL 137
F++M G P+ VT +++ A A + +D+ ++ RL VT ++L
Sbjct: 354 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK---RLKGVTNASSLRTSL 410
Query: 138 IKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGI 197
I MY D + V++ + + +L ++N ++ + + ++ M++ GI
Sbjct: 411 IDMYAKCGDIEAAHQVFNSI----LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGI 466
Query: 198 SPDYITYSTLLRAYIGGYLREDALGIYREMKEN 230
PD IT+ LL A + + I+R M ++
Sbjct: 467 QPDDITFVGLLSACSHSGMLDLGRHIFRTMTQD 499
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 122/280 (43%), Gaps = 9/280 (3%)
Query: 24 KELVLYNVAMKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDRAVEW 83
K+ V++NV + + KC + K F M ++ P+ VTF +++ + D V+
Sbjct: 202 KDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQL 261
Query: 84 FEKMPGFGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGM 143
+ G + + +++ Y++ D A +L+ R DTVT++ +I Y
Sbjct: 262 HGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS----RADTVTWNCMISGYVQ 317
Query: 144 LEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYIT 203
++ L + +M GV P+ T+++LLP+V + K I+ + R+ IS D
Sbjct: 318 SGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFL 377
Query: 204 YSTLLRAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIK 263
S L+ AY A I+ + V V + ++S G +++E+F +
Sbjct: 378 TSALIDAYFKCRGVSMAQNIFSQCNS----VDVVVFTAMISGYLHNGLYIDSLEMFRWLV 433
Query: 264 SSGIYQPDESTFSSLITVYSCFAKVSEAEAMLNEMIESGF 303
I P+E T S++ V + + +I+ GF
Sbjct: 434 KVKI-SPNEITLVSILPVIGILLALKLGRELHGFIIKKGF 472
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 111/270 (41%), Gaps = 50/270 (18%)
Query: 33 MKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMINCARLCSMSDR---AVEWFEKMPG 89
+ ++ KC G L E+ +R K D V++ +MI C+ SD A++ F +M
Sbjct: 483 IDMYAKC----GRMNLAYEIFERLSKRDIVSWNSMIT---RCAQSDNPSAAIDIFRQMGV 535
Query: 90 FGCEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQ 149
G D V+ + + A A + + + ++ + D + S LI MY +
Sbjct: 536 SGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKA 595
Query: 150 CLNVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEM-KRNGISPDYITYSTLL 208
+NV+ MK + N+ ++N+++ A K + ++ EM +++GI PD IT+
Sbjct: 596 AMNVFKTMK----EKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLE-- 649
Query: 209 RAYIGGYLREDALGIYREMKENRIGVTVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIY 268
++S C VG +DE V F +
Sbjct: 650 ---------------------------------IISSCCHVGDVDEGVRFFRSMTEDYGI 676
Query: 269 QPDESTFSSLITVYSCFAKVSEAEAMLNEM 298
QP + ++ ++ ++ +++EA + M
Sbjct: 677 QPQQEHYACVVDLFGRAGRLTEAYETVKSM 706
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/322 (19%), Positives = 130/322 (40%), Gaps = 50/322 (15%)
Query: 33 MKVFKKCKDFEGAEKLFDEMLQRK--LKPDNVTFATMINCARLCSMSDRAVEWFEKMPGF 90
+ ++ C F K+F + R+ ++P N ++ + L ++A+ ++ KM F
Sbjct: 77 LGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLL----NQALAFYFKMLCF 132
Query: 91 GCEPDAVT-----------------------------------CATVIFAYARVENVDMA 115
G PD T +++I AY +D+
Sbjct: 133 GVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVP 192
Query: 116 ERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPA 175
+L+DR + D V ++ ++ Y D + + M++ + PN T++ +L
Sbjct: 193 SKLFDRVLQK----DCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSV 248
Query: 176 VYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDALGIYREMKENRIGVT 235
L ++ + +G+ + ++LL Y +DA ++R M T
Sbjct: 249 CASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSR---ADT 305
Query: 236 VDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSSLITVYSCFAKVSEAEAML 295
V N ++S G ++E++ F ++ SSG+ PD TFSSL+ S F + + +
Sbjct: 306 VTW-NCMISGYVQSGLMEESLTFFYEMISSGVL-PDAITFSSLLPSVSKFENLEYCKQIH 363
Query: 296 NEMIESGFKPNIFVITPLVKCY 317
++ +IF+ + L+ Y
Sbjct: 364 CYIMRHSISLDIFLTSALIDAY 385
>AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11605156-11610651 FORWARD
LENGTH=843
Length = 843
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 117/245 (47%), Gaps = 15/245 (6%)
Query: 59 PDNVTFATMINCARLCSMSD--RAVEWFEKMPGFGCEPDAVTCATVIFAYARVENVDMAE 116
P + ++ ++ + LC ++ A++ E M G A +++ A ++ ++ +
Sbjct: 391 PSSTSYENLV--SYLCGSNEVVTALDIVENMCEAGLVISANILHSLLQAIEQILEFNLVQ 448
Query: 117 RLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCLNVYDDMKVLGVKPNLGTYNTLLPAV 176
R+Y ++ + ++ TF I + ++D++ N+ ++K + PN YN+++
Sbjct: 449 RIYSIMSNKSVKPNSETFRKSINLCIRIKDFEGAYNMLGNLKNFNLAPNSSMYNSIMAGY 508
Query: 177 YRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAYIGGYLREDAL--GIYREMKENRIGV 234
+R +K A + +EMK + PD +T+S Y+ Y E+A Y+EMK+ + V
Sbjct: 509 FREKKVNSALKVLKEMKEADVKPDSVTFS-----YLINYCGEEATIAKYYKEMKQAGVEV 563
Query: 235 TVDLCNLLLSMCADVGFLDEAVEIFEDIKSSGIYQPDESTFSS-LITVYSCFAKVSEAEA 293
+ L+ A G ++A ++ D++ + D + S LI+ + ++EA +
Sbjct: 564 NKHVYMSLVKAYASCGQFEKAKQVLMDLE---VPAKDHNELKSVLISALASNGNITEALS 620
Query: 294 MLNEM 298
+ EM
Sbjct: 621 IYEEM 625
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 6/203 (2%)
Query: 33 MKVFKKCKDFEGAEKLFDEMLQRKLKPDNVTFATMIN-CARLCSMSDRAVEWFEKMPGFG 91
++ ++ +F ++++ M + +KP++ TF IN C R+ + A + F
Sbjct: 435 LQAIEQILEFNLVQRIYSIMSNKSVKPNSETFRKSINLCIRIKDF-EGAYNMLGNLKNFN 493
Query: 92 CEPDAVTCATVIFAYARVENVDMAERLYDRAKTENWRLDTVTFSALIKMYGMLEDYDQCL 151
P++ +++ Y R + V+ A ++ K + + D+VTFS LI G +
Sbjct: 494 LAPNSSMYNSIMAGYFREKKVNSALKVLKEMKEADVKPDSVTFSYLINYCG---EEATIA 550
Query: 152 NVYDDMKVLGVKPNLGTYNTLLPAVYRARKPLLAKLIYEEMKRNGISPDYITYSTLLRAY 211
Y +MK GV+ N Y +L+ A + AK + +++ + + S L+ A
Sbjct: 551 KYYKEMKQAGVEVNKHVYMSLVKAYASCGQFEKAKQVLMDLEVPAKDHNELK-SVLISAL 609
Query: 212 IGGYLREDALGIYREMKENRIGV 234
+AL IY EMK+ R V
Sbjct: 610 ASNGNITEALSIYEEMKKLRCPV 632