Miyakogusa Predicted Gene

Lj6g3v1721620.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1721620.1 Non Chatacterized Hit- tr|I1MFR8|I1MFR8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,83.39,0,5'-AMP-activated protein kinase beta
subunit,5-AMP-activated protein kinase, beta subunit,
interacti,CUFF.59842.1
         (292 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G16360.3 | Symbols:  | 5'-AMP-activated protein kinase beta-2...   390   e-109
AT4G16360.1 | Symbols:  | 5'-AMP-activated protein kinase beta-2...   390   e-109
AT4G16360.2 | Symbols:  | 5'-AMP-activated protein kinase beta-2...   384   e-107
AT5G21170.1 | Symbols: AKINBETA1 | 5'-AMP-activated protein kina...   229   1e-60
AT5G21170.2 | Symbols: AKINBETA1 | 5'-AMP-activated protein kina...   219   1e-57
AT2G28060.1 | Symbols:  | 5'-AMP-activated protein kinase beta-2...    92   5e-19
AT1G09020.1 | Symbols: SNF4, ATSNF4 | homolog of yeast sucrose n...    54   1e-07

>AT4G16360.3 | Symbols:  | 5'-AMP-activated protein kinase beta-2
           subunit protein | chr4:9245571-9246833 FORWARD
           LENGTH=261
          Length = 261

 Score =  390 bits (1003), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 193/253 (76%), Positives = 222/253 (87%), Gaps = 4/253 (1%)

Query: 42  HPAPPSELMGHSPPASPRATQSPLMFTPQVPVVPLQRPDEMHAPCPSWMQT-TSGYEDVY 100
           H APP ELMG SPP SPRATQSPLMF PQVPV+PLQRPDE+H P PSWMQ+ +S YE+  
Sbjct: 11  HVAPP-ELMGQSPPHSPRATQSPLMFAPQVPVLPLQRPDEIHIPNPSWMQSPSSLYEEAS 69

Query: 101 NELGIPTMITWSYDGKDVAVEGSWDDWKTRMPLQKSGKDFTIMKELPSDVYQYRFVVDGQ 160
           NE GIPTMITW + GK++AVEGSWD+WKTR  LQ+SGKDFTIMK LPS VY+YRF+VDGQ
Sbjct: 70  NEQGIPTMITWCHGGKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPSGVYEYRFIVDGQ 129

Query: 161 WRYAPELPWAQDDAGNAYNILDLQEYVPEDIGGISSFEPPKSPDSSYSNLQLGSEDYAKE 220
           WR+APELP A+DDAGN +NILDLQ+YVPEDI  IS FEPP+SP++SYSNL LG+EDY+KE
Sbjct: 130 WRHAPELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGAEDYSKE 189

Query: 221 PPLVPPFLQMTLLNVPSANMET-QPLPSRPQHVVLNHLYMQKGKSSPSVVALGTTHRFVA 279
           PP+VPP LQMTLLN+P+AN +   PLP RPQHV+LNHLYMQKGKS PSVVALG+THRF+A
Sbjct: 190 PPVVPPHLQMTLLNLPAANPDIPSPLP-RPQHVILNHLYMQKGKSGPSVVALGSTHRFLA 248

Query: 280 KYVTVVLYKSMQR 292
           KYVTVVLYKS+QR
Sbjct: 249 KYVTVVLYKSLQR 261


>AT4G16360.1 | Symbols:  | 5'-AMP-activated protein kinase beta-2
           subunit protein | chr4:9245662-9246833 FORWARD
           LENGTH=259
          Length = 259

 Score =  390 bits (1003), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 193/253 (76%), Positives = 222/253 (87%), Gaps = 4/253 (1%)

Query: 42  HPAPPSELMGHSPPASPRATQSPLMFTPQVPVVPLQRPDEMHAPCPSWMQT-TSGYEDVY 100
           H APP ELMG SPP SPRATQSPLMF PQVPV+PLQRPDE+H P PSWMQ+ +S YE+  
Sbjct: 9   HVAPP-ELMGQSPPHSPRATQSPLMFAPQVPVLPLQRPDEIHIPNPSWMQSPSSLYEEAS 67

Query: 101 NELGIPTMITWSYDGKDVAVEGSWDDWKTRMPLQKSGKDFTIMKELPSDVYQYRFVVDGQ 160
           NE GIPTMITW + GK++AVEGSWD+WKTR  LQ+SGKDFTIMK LPS VY+YRF+VDGQ
Sbjct: 68  NEQGIPTMITWCHGGKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPSGVYEYRFIVDGQ 127

Query: 161 WRYAPELPWAQDDAGNAYNILDLQEYVPEDIGGISSFEPPKSPDSSYSNLQLGSEDYAKE 220
           WR+APELP A+DDAGN +NILDLQ+YVPEDI  IS FEPP+SP++SYSNL LG+EDY+KE
Sbjct: 128 WRHAPELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGAEDYSKE 187

Query: 221 PPLVPPFLQMTLLNVPSANMET-QPLPSRPQHVVLNHLYMQKGKSSPSVVALGTTHRFVA 279
           PP+VPP LQMTLLN+P+AN +   PLP RPQHV+LNHLYMQKGKS PSVVALG+THRF+A
Sbjct: 188 PPVVPPHLQMTLLNLPAANPDIPSPLP-RPQHVILNHLYMQKGKSGPSVVALGSTHRFLA 246

Query: 280 KYVTVVLYKSMQR 292
           KYVTVVLYKS+QR
Sbjct: 247 KYVTVVLYKSLQR 259


>AT4G16360.2 | Symbols:  | 5'-AMP-activated protein kinase beta-2
           subunit protein | chr4:9245662-9246833 FORWARD
           LENGTH=258
          Length = 258

 Score =  384 bits (987), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 192/253 (75%), Positives = 221/253 (87%), Gaps = 5/253 (1%)

Query: 42  HPAPPSELMGHSPPASPRATQSPLMFTPQVPVVPLQRPDEMHAPCPSWMQT-TSGYEDVY 100
           H APP ELMG SPP SPRATQSPLMF PQVPV+PLQRPDE+H P PSWMQ+ +S YE+  
Sbjct: 9   HVAPP-ELMGQSPPHSPRATQSPLMFAPQVPVLPLQRPDEIHIPNPSWMQSPSSLYEEAS 67

Query: 101 NELGIPTMITWSYDGKDVAVEGSWDDWKTRMPLQKSGKDFTIMKELPSDVYQYRFVVDGQ 160
           NE GIPTMITW + GK++AVEGSWD+WKT   LQ+SGKDFTIMK LPS VY+YRF+VDGQ
Sbjct: 68  NEQGIPTMITWCHGGKEIAVEGSWDNWKTSR-LQRSGKDFTIMKVLPSGVYEYRFIVDGQ 126

Query: 161 WRYAPELPWAQDDAGNAYNILDLQEYVPEDIGGISSFEPPKSPDSSYSNLQLGSEDYAKE 220
           WR+APELP A+DDAGN +NILDLQ+YVPEDI  IS FEPP+SP++SYSNL LG+EDY+KE
Sbjct: 127 WRHAPELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGAEDYSKE 186

Query: 221 PPLVPPFLQMTLLNVPSANMET-QPLPSRPQHVVLNHLYMQKGKSSPSVVALGTTHRFVA 279
           PP+VPP LQMTLLN+P+AN +   PLP RPQHV+LNHLYMQKGKS PSVVALG+THRF+A
Sbjct: 187 PPVVPPHLQMTLLNLPAANPDIPSPLP-RPQHVILNHLYMQKGKSGPSVVALGSTHRFLA 245

Query: 280 KYVTVVLYKSMQR 292
           KYVTVVLYKS+QR
Sbjct: 246 KYVTVVLYKSLQR 258


>AT5G21170.1 | Symbols: AKINBETA1 | 5'-AMP-activated protein kinase
           beta-2 subunit protein | chr5:7205718-7208239 FORWARD
           LENGTH=283
          Length = 283

 Score =  229 bits (585), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 138/294 (46%), Positives = 183/294 (62%), Gaps = 13/294 (4%)

Query: 1   MGNVNGREDLNGSSPSGAEDEEEERGFDSVGDCMSLPDGVLHPAPPSELMGHSPPASPRA 60
           MGN NG+ D + ++ SG  D        + GD  +      H  P S+ M  SPP SP  
Sbjct: 1   MGNANGK-DEDAAAGSGGADVTSSSARSNGGDPSARSR---HRRPSSDSMSSSPPGSPAR 56

Query: 61  TQSPLMFTPQVPVVPLQRPDEMHAPCPSWMQTTSGYEDVYN--ELGIPTMITWSYDGKDV 118
           + SP +F PQVPV PLQR +   AP P+ +Q         N  E GIPT+ITW+  G DV
Sbjct: 57  SPSPFLFAPQVPVAPLQRAN---APPPNNIQWNQSQRVFDNPPEQGIPTIITWNQGGNDV 113

Query: 119 AVEGSWDDWKTRMPLQKSGKDFTIMKELPSDVYQYRFVVDGQWRYAPELPWAQDDAGNAY 178
           AVEGSWD+W++R  LQKSGKD +I+  LPS +Y Y+ +VDG+ +Y P+LP+  D+ GN  
Sbjct: 114 AVEGSWDNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLPFVADEVGNVC 173

Query: 179 NILDLQEYVPEDIGGISSFEPPKSPDSSYSNLQLGSEDYAKEPPLVPPFLQMTLLNVPSA 238
           NILD+  +VPE+   I  FE P SPD SY      +EDYAKEP  VPP L +TLL     
Sbjct: 174 NILDVHNFVPENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQLHLTLL----G 229

Query: 239 NMETQPLPSRPQHVVLNHLYMQKGKSSPSVVALGTTHRFVAKYVTVVLYKSMQR 292
             E   + ++PQHVVLNH+++++G +  S+VALG THRF +KY+TVVLYK + R
Sbjct: 230 TTEETAIATKPQHVVLNHVFIEQGWTPQSIVALGLTHRFESKYITVVLYKPLTR 283


>AT5G21170.2 | Symbols: AKINBETA1 | 5'-AMP-activated protein kinase
           beta-2 subunit protein | chr5:7205718-7208239 FORWARD
           LENGTH=320
          Length = 320

 Score =  219 bits (559), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 113/224 (50%), Positives = 149/224 (66%), Gaps = 9/224 (4%)

Query: 71  VPVVPLQRPDEMHAPCPSWMQTTSGYEDVYN--ELGIPTMITWSYDGKDVAVEGSWDDWK 128
           VPV PLQR +   AP P+ +Q         N  E GIPT+ITW+  G DVAVEGSWD+W+
Sbjct: 104 VPVAPLQRAN---APPPNNIQWNQSQRVFDNPPEQGIPTIITWNQGGNDVAVEGSWDNWR 160

Query: 129 TRMPLQKSGKDFTIMKELPSDVYQYRFVVDGQWRYAPELPWAQDDAGNAYNILDLQEYVP 188
           +R  LQKSGKD +I+  LPS +Y Y+ +VDG+ +Y P+LP+  D+ GN  NILD+  +VP
Sbjct: 161 SRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLPFVADEVGNVCNILDVHNFVP 220

Query: 189 EDIGGISSFEPPKSPDSSYSNLQLGSEDYAKEPPLVPPFLQMTLLNVPSANMETQPLPSR 248
           E+   I  FE P SPD SY      +EDYAKEP  VPP L +TLL       E   + ++
Sbjct: 221 ENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQLHLTLL----GTTEETAIATK 276

Query: 249 PQHVVLNHLYMQKGKSSPSVVALGTTHRFVAKYVTVVLYKSMQR 292
           PQHVVLNH+++++G +  S+VALG THRF +KY+TVVLYK + R
Sbjct: 277 PQHVVLNHVFIEQGWTPQSIVALGLTHRFESKYITVVLYKPLTR 320


>AT2G28060.1 | Symbols:  | 5'-AMP-activated protein kinase beta-2
           subunit protein | chr2:11950174-11950618 REVERSE
           LENGTH=114
          Length = 114

 Score = 91.7 bits (226), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 49/99 (49%), Positives = 65/99 (65%), Gaps = 4/99 (4%)

Query: 194 ISSFEPPKSPDSSYSNLQLGSEDYAKEPPLVPPFLQMTLLNVPSANMETQPLPSRPQHVV 253
           +  FE P SP SSY+N+   +ED  ++PP VPP LQ +LL     N  +  L   PQ+VV
Sbjct: 14  VVGFEVPVSPVSSYNNVYSSTEDETRDPPAVPPHLQHSLL----GNQGSMELAYAPQNVV 69

Query: 254 LNHLYMQKGKSSPSVVALGTTHRFVAKYVTVVLYKSMQR 292
           LNHLY++   +  SVVALG +HRF  K+VTVV+YK +QR
Sbjct: 70  LNHLYIENRDAPRSVVALGFSHRFRTKFVTVVIYKPVQR 108


>AT1G09020.1 | Symbols: SNF4, ATSNF4 | homolog of yeast sucrose
           nonfermenting 4 | chr1:2900149-2904212 REVERSE
           LENGTH=487
          Length = 487

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 3/97 (3%)

Query: 88  SWMQTTSGYEDVYNELGIPTMITWSYDGKDVAVEGSWDDWKTRMP---LQKSGKDFTIMK 144
           S + ++ G      +L  PT   W Y G+ V + GS+  W   +P   L+     F ++ 
Sbjct: 4   STLDSSRGNSAASGQLLTPTRFVWPYGGRRVFLSGSFTRWTEHVPMSPLEGCPTVFQVIC 63

Query: 145 ELPSDVYQYRFVVDGQWRYAPELPWAQDDAGNAYNIL 181
            L    +QY+F VDG+WR+    P+   + G    I 
Sbjct: 64  NLTPGYHQYKFFVDGEWRHDEHQPFVSGNGGVVNTIF 100