Miyakogusa Predicted Gene

Lj6g3v1721600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1721600.1 tr|G7JMX4|G7JMX4_MEDTR Acyl carrier protein
(Fragment) OS=Medicago truncatula GN=MTR_4g133940 PE=3
S,64.79,1e-18,no description,Acyl carrier protein-like; acyl_carrier:
acyl carrier protein,Acyl carrier protein (A,CUFF.59840.1
         (98 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G47630.2 | Symbols: mtACP3 | mitochondrial acyl carrier prote...   117   2e-27
AT5G47630.1 | Symbols: mtACP3 | mitochondrial acyl carrier prote...   117   2e-27
AT2G44620.1 | Symbols: MTACP-1, MTACP1 | mitochondrial acyl carr...    80   4e-16
AT1G65290.1 | Symbols: mtACP2 | mitochondrial acyl carrier prote...    79   5e-16

>AT5G47630.2 | Symbols: mtACP3 | mitochondrial acyl carrier protein
           3 | chr5:19306397-19306885 FORWARD LENGTH=131
          Length = 131

 Score =  117 bits (292), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 55/85 (64%), Positives = 64/85 (75%)

Query: 12  ANYDQILDRVIALAKKYDKIDASKVTEAADFQKDLNMDNLDRVELIMVIEEEFYVEIPDE 71
              DQIL RVI L KKYDK + S+VTE ADFQKDL++D+LD+ EL+M IEEEF +EIPDE
Sbjct: 46  GGQDQILSRVIELVKKYDKTNTSEVTERADFQKDLSLDSLDKTELVMAIEEEFSIEIPDE 105

Query: 72  NADKLNCCADVAKYIASEADKKYAE 96
            ADKL CC DVA YI SE   K +E
Sbjct: 106 KADKLTCCGDVATYILSETPTKASE 130


>AT5G47630.1 | Symbols: mtACP3 | mitochondrial acyl carrier protein
           3 | chr5:19306397-19306885 FORWARD LENGTH=131
          Length = 131

 Score =  117 bits (292), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 55/85 (64%), Positives = 64/85 (75%)

Query: 12  ANYDQILDRVIALAKKYDKIDASKVTEAADFQKDLNMDNLDRVELIMVIEEEFYVEIPDE 71
              DQIL RVI L KKYDK + S+VTE ADFQKDL++D+LD+ EL+M IEEEF +EIPDE
Sbjct: 46  GGQDQILSRVIELVKKYDKTNTSEVTERADFQKDLSLDSLDKTELVMAIEEEFSIEIPDE 105

Query: 72  NADKLNCCADVAKYIASEADKKYAE 96
            ADKL CC DVA YI SE   K +E
Sbjct: 106 KADKLTCCGDVATYILSETPTKASE 130


>AT2G44620.1 | Symbols: MTACP-1, MTACP1 | mitochondrial acyl carrier
           protein 1 | chr2:18414320-18415065 FORWARD LENGTH=122
          Length = 122

 Score = 79.7 bits (195), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 59/85 (69%), Gaps = 1/85 (1%)

Query: 3   LRCWSTYT-TANYDQILDRVIALAKKYDKIDASKVTEAADFQKDLNMDNLDRVELIMVIE 61
           +R +S++    + + ++DRV+ + K + K+D SKVT    FQ DL +D+LD VE++M IE
Sbjct: 31  IRSFSSHDDHLSREAVVDRVLDVVKSFPKVDPSKVTPEVHFQNDLGLDSLDTVEIVMAIE 90

Query: 62  EEFYVEIPDENADKLNCCADVAKYI 86
           EEF +EIPD+ ADK++ C+   +Y+
Sbjct: 91  EEFKLEIPDKEADKIDSCSLAIEYV 115


>AT1G65290.1 | Symbols: mtACP2 | mitochondrial acyl carrier protein
           2 | chr1:24249088-24250366 REVERSE LENGTH=126
          Length = 126

 Score = 79.3 bits (194), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 57/94 (60%), Gaps = 3/94 (3%)

Query: 3   LRCWSTYTTANY---DQILDRVIALAKKYDKIDASKVTEAADFQKDLNMDNLDRVELIMV 59
           LR +S     ++    ++ DRV+++ K + K+D SKVT  A+FQ DL +D+LD VE++M 
Sbjct: 33  LRRFSEEVRGSFLDKSEVTDRVLSVVKNFQKVDPSKVTPKANFQNDLGLDSLDSVEVVMA 92

Query: 60  IEEEFYVEIPDENADKLNCCADVAKYIASEADKK 93
           +EEEF  EIPD  ADK+        +IAS    K
Sbjct: 93  LEEEFGFEIPDNEADKIQSIDLAVDFIASHPQAK 126