Miyakogusa Predicted Gene
- Lj6g3v1695020.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1695020.1 Non Chatacterized Hit- tr|I1L073|I1L073_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,80.4,0,TPR-like,NULL;
PPR,Pentatricopeptide repeat; no description,Tetratricopeptide-like
helical; PENTATRI,CUFF.59801.1
(662 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 492 e-139
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 488 e-138
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 454 e-127
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 452 e-127
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 369 e-102
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 364 e-100
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 360 2e-99
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 351 9e-97
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 346 4e-95
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 340 2e-93
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 338 7e-93
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 322 8e-88
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 319 4e-87
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 319 5e-87
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 315 8e-86
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 313 3e-85
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 312 4e-85
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 308 7e-84
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 307 2e-83
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 5e-83
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 9e-83
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 2e-82
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 303 3e-82
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 296 3e-80
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 296 4e-80
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 4e-80
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 1e-79
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 1e-79
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 2e-79
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 2e-79
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 3e-79
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 292 4e-79
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 291 7e-79
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 289 3e-78
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 1e-77
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 4e-77
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 286 4e-77
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 285 9e-77
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 3e-76
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 7e-76
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 8e-75
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 9e-75
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 9e-75
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 9e-75
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 278 1e-74
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 1e-74
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 1e-74
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 2e-74
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 277 2e-74
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 2e-74
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 7e-74
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 275 8e-74
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 275 1e-73
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 1e-73
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 2e-73
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 2e-73
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 272 5e-73
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 6e-73
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 9e-73
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 1e-72
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 270 2e-72
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 4e-72
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 6e-72
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 268 6e-72
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 2e-71
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 2e-71
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 266 3e-71
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 1e-70
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 264 1e-70
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 263 3e-70
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 263 4e-70
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 7e-70
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 7e-70
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 8e-70
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 261 1e-69
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 1e-69
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 2e-69
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 2e-69
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 260 2e-69
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 260 2e-69
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 259 3e-69
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 4e-69
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 258 8e-69
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 258 1e-68
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 1e-68
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 2e-68
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 4e-68
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 4e-68
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 256 4e-68
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 253 3e-67
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 253 4e-67
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 6e-67
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 9e-67
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 1e-66
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 2e-66
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 250 2e-66
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 250 2e-66
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 3e-66
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 3e-66
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 249 5e-66
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 6e-66
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 6e-66
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 7e-66
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 1e-65
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 246 3e-65
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 4e-65
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 5e-65
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 8e-65
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 244 1e-64
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 243 2e-64
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 4e-64
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 5e-64
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 2e-63
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 4e-63
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 6e-63
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 8e-63
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 238 1e-62
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 238 1e-62
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 3e-62
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 4e-62
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 3e-60
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 4e-60
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 8e-60
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 228 1e-59
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 227 2e-59
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 4e-59
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 4e-59
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 226 5e-59
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 5e-59
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 225 9e-59
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 224 2e-58
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 2e-58
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 4e-58
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 223 4e-58
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 7e-58
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 8e-58
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 2e-57
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 4e-57
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 5e-57
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 5e-57
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 218 2e-56
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 3e-56
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 213 3e-55
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 4e-55
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 6e-55
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 212 6e-55
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 2e-54
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 3e-54
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 4e-54
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 9e-54
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 9e-54
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 1e-53
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 3e-51
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 7e-51
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 4e-50
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 5e-50
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 2e-49
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 4e-49
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 5e-49
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 6e-47
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 185 1e-46
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 2e-46
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 180 3e-45
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 3e-45
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 1e-44
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 4e-44
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 7e-43
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 2e-42
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 4e-41
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 1e-40
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 6e-34
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 3e-28
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 3e-28
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 1e-27
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 4e-27
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 1e-26
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 2e-26
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 5e-26
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 6e-26
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 115 8e-26
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 9e-26
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-25
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-25
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 1e-25
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 3e-25
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 3e-25
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 4e-25
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 4e-25
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 110 3e-24
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 3e-24
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 4e-24
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 1e-23
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 107 3e-23
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 4e-23
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 6e-23
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 7e-23
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 9e-23
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 105 1e-22
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 1e-22
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 105 1e-22
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 1e-22
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 1e-22
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 5e-22
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 5e-22
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 6e-22
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 6e-22
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 6e-22
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 1e-21
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 2e-21
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 9e-21
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 98 2e-20
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 4e-20
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 5e-20
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 7e-20
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 1e-19
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 94 4e-19
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-18
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 2e-18
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 91 2e-18
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 91 2e-18
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 4e-18
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 4e-18
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 86 6e-17
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 86 6e-17
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 9e-17
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 1e-16
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 84 2e-16
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 84 3e-16
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 84 3e-16
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 84 4e-16
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 82 2e-15
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 80 4e-15
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 78 2e-14
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 78 2e-14
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 3e-14
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 6e-14
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 72 1e-12
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 72 1e-12
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 72 2e-12
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 5e-12
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 7e-12
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 7e-12
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 68 2e-11
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 7e-11
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 64 3e-10
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 62 2e-09
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 3e-09
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 3e-09
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 59 7e-09
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 1e-07
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 55 1e-07
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 54 2e-07
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 54 3e-07
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 54 5e-07
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 53 6e-07
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 9e-07
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 50 4e-06
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 492 bits (1266), Expect = e-139, Method: Compositional matrix adjust.
Identities = 238/608 (39%), Positives = 383/608 (62%), Gaps = 5/608 (0%)
Query: 53 WSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAM 112
WS N I+ R G+ + ARKLFDEMP+RD VS+N MI Y++N+++ A +F+ M
Sbjct: 93 WSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIM 152
Query: 113 SERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFD 172
ERDV + + M+ GYA+ G +D+AR VFD M E+N SW +L+S Y + + EEA LF
Sbjct: 153 PERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK 212
Query: 173 QMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKL 232
++V+W ++ GF + + AR+FFD M ++ ++W ++ Y +G+ E +L
Sbjct: 213 SRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQL 272
Query: 233 FLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVAR 292
F E P ++V +W M+SG + V+EA LF+ MP+RN VSW AM++G Q + +E+A+
Sbjct: 273 FDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAK 332
Query: 293 KYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGE 352
+ FD+MP ++++ W+ MIT Y + EA LF+ +P+++ W +I GY ++G + E
Sbjct: 333 ELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFE 392
Query: 353 ALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI---MQAHAMVIHLGFEQNTWVTNALIT 409
ALRLF+ M R R ++ +S +++C +V + Q H ++ G+E +V NAL+
Sbjct: 393 ALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL 452
Query: 410 LYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEIT 469
+Y K G + A +F+ + KD+VSW MI Y+ HG G AL+ F M G KPD+ T
Sbjct: 453 MYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDAT 512
Query: 470 FVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTI 529
V +LSACSH GLV++GR+ F ++ Y + +HY+C+VD+LGRAGL+ +A +++ +
Sbjct: 513 MVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 572
Query: 530 PPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEF 589
P E D A+ LLGA ++HGN ++A + K+ ++EP +SG YVLLSN YA+ +W +
Sbjct: 573 -PFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDV 631
Query: 590 AQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGY 649
++R RM++K VKK+ G+S I+++ K H F VG+ HP+ +EI+ FL++ L M++ GY
Sbjct: 632 GKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEE-LDLRMKKAGY 690
Query: 650 TPENSLLI 657
+ S+++
Sbjct: 691 VSKTSVVL 698
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 194/409 (47%), Gaps = 44/409 (10%)
Query: 52 DWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKA 111
+W+L N + ++ K+ EAR+ FD M RD VS+N++I Y ++ + A +F
Sbjct: 216 NWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE 275
Query: 112 MSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLF 171
+DV +AMV GY + ++ ARE+FD M ERN SW ++++GY + R E A +LF
Sbjct: 276 SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELF 335
Query: 172 DQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYK 231
D M R+V TW TM++G+AQ G + A+ FD MP+++ ++W AM+ Y +G E +
Sbjct: 336 DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALR 395
Query: 232 LFLEMPERNVR----SWNVMISGC--LSANRVDEAIH--LFETMPDRNHVSWTAMVSGLA 283
LF++M R S++ +S C + A + + +H L + + A++
Sbjct: 396 LFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYC 455
Query: 284 QNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDG 343
+ +E A F M KD+ +W+ MI Y
Sbjct: 456 KCGSIEEANDLFKEMAGKDIVSWNTMIAGY------------------------------ 485
Query: 344 YVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCD--GMVEIMQA--HAMVIHLGFEQ 399
R+G ALR F M R +P TM +++++C G+V+ + + M G
Sbjct: 486 -SRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMP 544
Query: 400 NTWVTNALITLYSKSGDLCSAM-LVFELLKSKDVVSWTAMIVAYANHGH 447
N+ ++ L ++G L A L+ + D W ++ A HG+
Sbjct: 545 NSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGN 593
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 132/266 (49%), Gaps = 15/266 (5%)
Query: 231 KLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEV 290
K L+ + +++ WNV IS + R +EA+ +F+ MP + VS+ M+SG +N E+
Sbjct: 54 KPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFEL 113
Query: 291 ARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEA 350
ARK FD MP +D+ +W+ MI YV + LG+A ELF ++PE++V WNT++ GY +NG
Sbjct: 114 ARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCV 173
Query: 351 GEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVT---NAL 407
+A +F M +++ + + M+ M+ + W N L
Sbjct: 174 DDARSVFDRMPEKNDVSWNALLSAYVQNSK-----MEEACMLFK---SRENWALVSWNCL 225
Query: 408 ITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDE 467
+ + K + A F+ + +DVVSW +I YA G A Q+F D
Sbjct: 226 LGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLF----DESPVQDV 281
Query: 468 ITFVGLLSACSHAGLVNQGRRVFDSI 493
T+ ++S +V + R +FD +
Sbjct: 282 FTWTAMVSGYIQNRMVEEARELFDKM 307
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 488 bits (1255), Expect = e-138, Method: Compositional matrix adjust.
Identities = 246/601 (40%), Positives = 376/601 (62%), Gaps = 7/601 (1%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVV 118
NV IT L R GK+ EARKLFD + S+NSM+A Y N A +F M +R+++
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII 80
Query: 119 AQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERS 178
+ + +V GY K G +D AR+VFD M ERN SWT+L+ GY G+ + A LF +M E++
Sbjct: 81 SWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKN 140
Query: 179 VVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPE 238
V+WT M+ GF Q+G +D A + ++++P+K+ IA T+M+ G+ E ++F EM E
Sbjct: 141 KVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSE 200
Query: 239 RNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIM 298
R+V +W M++G NRVD+A +F+ MP++ VSWT+M+ G QN +E A + F++M
Sbjct: 201 RSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM 260
Query: 299 PFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFI 358
P K + A +AMI+ + + +A +F+ + E+N W T+I + RNG EAL LFI
Sbjct: 261 PVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFI 320
Query: 359 LMLRSCFRPCVTTMTSIITSCDGMVEI---MQAHAMVIHLGFEQNTWVTNALITLYSKSG 415
LM + RP T+ SI++ C + + Q HA ++ F+ + +V + L+T+Y K G
Sbjct: 321 LMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCG 380
Query: 416 DLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSG-TKPDEITFVGLL 474
+L + L+F+ SKD++ W ++I YA+HG G AL+VF M SG TKP+E+TFV L
Sbjct: 381 ELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATL 440
Query: 475 SACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEI 534
SACS+AG+V +G ++++S++ + + HY+C+VDMLGRAG NEAM+++ ++ E
Sbjct: 441 SACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSM-TVEP 499
Query: 535 DEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRK 594
D AV +LLGAC+ H + VA +KL+ +EP +SG Y+LLSN YA++ +W + A++RK
Sbjct: 500 DAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRK 559
Query: 595 RMKEKNVKKISGFSQIQVKGKNHLFFVGE-RSHPQVEEIYGFLQQSLQPLMRETGYTPEN 653
MK + V+K G S +V+ K H F G SHP+ E I L + L L+RE GY P+
Sbjct: 560 LMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDE-LDGLLREAGYNPDC 618
Query: 654 S 654
S
Sbjct: 619 S 619
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/448 (25%), Positives = 201/448 (44%), Gaps = 67/448 (14%)
Query: 181 TWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERN 240
T ++ ++ G + AR+ FD K+ +W +MV Y N + KLF EMP+RN
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRN 78
Query: 241 VRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPF 300
+ SWN ++SG + +DEA +F+ MP+RN VSWTA+V G N V+VA F MP
Sbjct: 79 IISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPE 138
Query: 301 KDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILM 360
K+ +W+ M+ ++ + + +A +L+ ++P+K+ ++I G + G EA +F M
Sbjct: 139 KNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEM 198
Query: 361 LRSCFRPCVTTMTSIITSC-------------DGMVEIMQAHAMVIHLGFEQNTWV---- 403
V T T+++T D M E + + +G+ QN +
Sbjct: 199 SER----SVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAE 254
Query: 404 -------------TNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHH 450
NA+I+ + G++ A VF+ +K ++ SW +I + +G
Sbjct: 255 ELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELE 314
Query: 451 ALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDS-IKGAYNLNLKVEH---- 505
AL +F M G +P T + +LS C+ ++ G++V ++ +++++ V
Sbjct: 315 ALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMT 374
Query: 506 -------------------------YSCLVDMLGRAGLVNEAMDVVSTIPPS---EIDEA 537
++ ++ GL EA+ V +P S + +E
Sbjct: 375 MYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEV 434
Query: 538 VLVALLGACKLHGNIKVANSIGQKLLSL 565
VA L AC G ++ I + + S+
Sbjct: 435 TFVATLSACSYAGMVEEGLKIYESMESV 462
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 454 bits (1168), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/590 (39%), Positives = 353/590 (59%), Gaps = 40/590 (6%)
Query: 65 LGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMV 124
L + GK+ EARKLFD +P ERDVV + ++
Sbjct: 56 LCKVGKIAEARKLFDGLP-------------------------------ERDVVTWTHVI 84
Query: 125 DGYAKAGRLDNAREVFDNMTER-NAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWT 183
GY K G + ARE+FD + R N +WT+++SGY R + A LF +M ER+VV+W
Sbjct: 85 TGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWN 144
Query: 184 TMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRS 243
TM+ G+AQ+G +D A FD MPE+N ++W +MVK+ + G+ E LF MP R+V S
Sbjct: 145 TMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVS 204
Query: 244 WNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDM 303
W M+ G +VDEA LF+ MP+RN +SW AM++G AQN ++ A + F +MP +D
Sbjct: 205 WTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDF 264
Query: 304 AAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRS 363
A+W+ MIT ++ + + +A LF+ +PEKNV W T+I GYV N E EAL +F MLR
Sbjct: 265 ASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRD 324
Query: 364 -CFRPCVTTMTSIITSCD---GMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCS 419
+P V T SI+++C G+VE Q H ++ ++N VT+AL+ +YSKSG+L +
Sbjct: 325 GSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIA 384
Query: 420 AMLVFE--LLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSAC 477
A +F+ L+ +D++SW +MI YA+HGHG A++++ +M G KP +T++ LL AC
Sbjct: 385 ARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFAC 444
Query: 478 SHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEA 537
SHAGLV +G F + +L L+ EHY+CLVD+ GRAG + + + ++ + + +
Sbjct: 445 SHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINC-DDARLSRS 503
Query: 538 VLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMK 597
A+L AC +H + +A + +K+L +G YVL+SN YAA + +E A++R +MK
Sbjct: 504 FYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMK 563
Query: 598 EKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRET 647
EK +KK G S ++V +NHLF VG++SHPQ E + L L+ MR+
Sbjct: 564 EKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSIL-SDLRNKMRKN 612
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 168/280 (60%), Gaps = 11/280 (3%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVV 118
N I + G++ +A +LFDEMP+R+ VS+NSM+ ++ + A +F+ M RDVV
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVV 203
Query: 119 AQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERS 178
+ +AMVDG AK G++D AR +FD M ERN SW ++I+GY + R +EA QLF M ER
Sbjct: 204 SWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERD 263
Query: 179 VVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEM-- 236
+W TM++GF +N ++ A FD MPEKN I+WT M+ Y++N + E +F +M
Sbjct: 264 FASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLR 323
Query: 237 ---PERNVRSWNVMISGC--LSANRVDEAIH--LFETMPDRNHVSWTAMVSGLAQNKMVE 289
+ NV ++ ++S C L+ + IH + +++ +N + +A+++ +++ +
Sbjct: 324 DGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELI 383
Query: 290 VARKYFD--IMPFKDMAAWSAMITAYVDEKLLGEALELFN 327
ARK FD ++ +D+ +W++MI Y EA+E++N
Sbjct: 384 AARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYN 423
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 452 bits (1164), Expect = e-127, Method: Compositional matrix adjust.
Identities = 237/600 (39%), Positives = 360/600 (60%), Gaps = 10/600 (1%)
Query: 61 EITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQ 120
EI+ L R GK+ EARK FD + + S+NS+++ Y N A +F MSER+VV+
Sbjct: 23 EISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSW 82
Query: 121 SAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVV 180
+ +V GY K + AR VF+ M ERN SWT+++ GY + G EA LF +M ER+ V
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEV 142
Query: 181 TWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERN 240
+WT M G +G +D AR+ +D+MP K+ +A T M+ G+ E +F EM ERN
Sbjct: 143 SWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERN 202
Query: 241 VRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPF 300
V +W MI+G NRVD A LFE MP++ VSWT+M+ G + +E A ++F++MP
Sbjct: 203 VVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPM 262
Query: 301 KDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILM 360
K + A +AMI + + + +A +F+L+ +++ W +I Y R G EAL LF M
Sbjct: 263 KPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQM 322
Query: 361 LRSCFRPCVTTMTSIITSCDGMVEIM---QAHAMVIHLGFEQNTWVTNALITLYSKSGDL 417
+ RP ++ SI++ C + + Q HA ++ F+ + +V + L+T+Y K G+L
Sbjct: 323 QKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGEL 382
Query: 418 CSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSAC 477
A LVF+ SKD++ W ++I YA+HG G AL++F M +SGT P+++T + +L+AC
Sbjct: 383 VKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTAC 442
Query: 478 SHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVS--TIPPSEID 535
S+AG + +G +F+S++ + + VEHYSC VDMLGRAG V++AM+++ TI P D
Sbjct: 443 SYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKP---D 499
Query: 536 EAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKR 595
V ALLGACK H + +A +KL EP ++G YVLLS+ A+ +W + A VRK
Sbjct: 500 ATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKN 559
Query: 596 MKEKNVKKISGFSQIQVKGKNHLFFVGE-RSHPQVEEIYGFLQQSLQPLMRETGYTPENS 654
M+ NV K G S I+V K H+F G ++HP+ I L+++ L+RE GY+P+ S
Sbjct: 560 MRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKT-DGLLREAGYSPDCS 618
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 123/263 (46%), Gaps = 22/263 (8%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVV 118
N I G G++ +AR++FD M RD ++ MI Y + A +F M ++ V
Sbjct: 269 NAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVR 328
Query: 119 AQ----SAMVDGYAKAGRLDNAREVFDNMT----ERNAFSWTSLISGYFRCGRTEEALQL 170
+++ A L R+V ++ + + + + L++ Y +CG +A +
Sbjct: 329 PSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLV 388
Query: 171 FDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQF 226
FD+ S + ++ W +++SG+A +GL + A + F MP N + A++ + G+
Sbjct: 389 FDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKL 448
Query: 227 SEGYKLFLEMPER-----NVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVS-WTAMVS 280
EG ++F M + V ++ + A +VD+A+ L E+M + + W A++
Sbjct: 449 EEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLG 508
Query: 281 GLAQNKMVEV----ARKYFDIMP 299
+ +++ A+K F+ P
Sbjct: 509 ACKTHSRLDLAEVAAKKLFENEP 531
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/615 (35%), Positives = 334/615 (54%), Gaps = 61/615 (9%)
Query: 55 LRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSE 114
R N E+ + R G + EAR +F+++ R+ V++N+MI+ Y+K ++++ A +F M +
Sbjct: 40 FRATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPK 99
Query: 115 RDVVAQSAMVDGYAKAGR---LDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLF 171
RDVV + M+ GY G L+ AR++FD M R++FSW ++ISGY + R EAL LF
Sbjct: 100 RDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLF 159
Query: 172 DQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSE--- 228
++M ER+ V+W+ M++GF QNG VD A F MP K++ A+V + N + SE
Sbjct: 160 EKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAW 219
Query: 229 ------------------------GYK----------LFLEMPE---------------R 239
GY LF ++P+ +
Sbjct: 220 VLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCK 279
Query: 240 NVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMP 299
NV SWN MI L V A LF+ M DR+ +SW M+ G +E A F MP
Sbjct: 280 NVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMP 339
Query: 300 FKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFIL 359
+D +W+ M++ Y + A F PEK+ WN+II Y +N + EA+ LFI
Sbjct: 340 NRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIR 399
Query: 360 MLRSCFRPCVTTMTSIITSCDGMVEI---MQAHAMVIHLGFEQNTWVTNALITLYSKSGD 416
M +P T+TS++++ G+V + MQ H +V+ + V NALIT+YS+ G+
Sbjct: 400 MNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGE 458
Query: 417 LCSAMLVFELLKSK-DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLS 475
+ + +F+ +K K +V++W AMI YA HG+ AL +F M ++G P ITFV +L+
Sbjct: 459 IMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLN 518
Query: 476 ACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEID 535
AC+HAGLV++ + F S+ Y + ++EHYS LV++ G EAM +++++ P E D
Sbjct: 519 ACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSM-PFEPD 577
Query: 536 EAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKR 595
+ V ALL AC+++ N+ +A+ + + LEP SS YVLL N YA WDE +QVR
Sbjct: 578 KTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMN 637
Query: 596 MKEKNVKKISGFSQI 610
M+ K +KK G S +
Sbjct: 638 MESKRIKKERGSSWV 652
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/624 (33%), Positives = 349/624 (55%), Gaps = 27/624 (4%)
Query: 58 RNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDV 117
+N I + G L++ R++FD+MPQR+ ++NS++ K + A+++F++M ERD
Sbjct: 58 QNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQ 117
Query: 118 VAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQLFDQ 173
++MV G+A+ R + A F M + N +S+ S++S + +Q+
Sbjct: 118 CTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSL 177
Query: 174 MSER----SVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEG 229
+++ V + +V +++ G V+ A+R FD M ++N ++W +++ + NG E
Sbjct: 178 IAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEA 237
Query: 230 YKLFLEMPERNVRSWNV----MISGC--LSANRVDEAIHLFETMPD--RNHVSWT-AMVS 280
+F M E V V +IS C LSA +V + +H D RN + + A V
Sbjct: 238 LDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVD 297
Query: 281 GLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTI 340
A+ ++ AR FD MP +++ A ++MI+ Y A +F + E+NV WN +
Sbjct: 298 MYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNAL 357
Query: 341 IDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI---MQAHAMVIHLGF 397
I GY +NGE EAL LF L+ R P + +I+ +C + E+ MQAH V+ GF
Sbjct: 358 IAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGF 417
Query: 398 ------EQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHA 451
E + +V N+LI +Y K G + LVF + +D VSW AMI+ +A +G+G+ A
Sbjct: 418 KFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEA 477
Query: 452 LQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVD 511
L++F M+ SG KPD IT +G+LSAC HAG V +GR F S+ + + +HY+C+VD
Sbjct: 478 LELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVD 537
Query: 512 MLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSG 571
+LGRAG + EA ++ + P + D + +LL ACK+H NI + + +KLL +EP++SG
Sbjct: 538 LLGRAGFLEEAKSMIEEM-PMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSG 596
Query: 572 GYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEE 631
YVLLSN YA +W++ VRK M+++ V K G S I+++G +H+F V ++SHP+ ++
Sbjct: 597 PYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQ 656
Query: 632 IYGFLQQSLQPLMRETGYTPENSL 655
I+ L + + E +T SL
Sbjct: 657 IHSLLDILIAEMRPEQDHTEIGSL 680
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 213/667 (31%), Positives = 354/667 (53%), Gaps = 58/667 (8%)
Query: 24 HHRRRVFSQCQPIFRFLRNFTASISISHDWSLRKRNVEITILGRRGKLKEARKLFDEMPQ 83
H R + + IFR + N + I+ I+ GK+ +A ++FDEMP
Sbjct: 60 HARNGNLQEAEAIFRQMSNRSIVSWIAM----------ISAYAENGKMSKAWQVFDEMPV 109
Query: 84 RDAVSYNSMIAVYLKNK-DVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDN 142
R SYN+MI +KNK D+ A +F + E++ V+ + M+ G+ +AGR D A ++
Sbjct: 110 RVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE 169
Query: 143 --MTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARR 200
+ R++ + L+SGY R G+ EA+++F M+ + VV+ ++MV G+ + G + AR
Sbjct: 170 TPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARS 229
Query: 201 FFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPER-----NVRSWNVMISGCLSAN 255
FD M E+N I WTAM+ Y G F +G+ LFL M + N + VM C
Sbjct: 230 LFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFV 289
Query: 256 R-----------------------------------VDEAIHLFETMPDRNHVSWTAMVS 280
R + EA +F M +++ VSW ++++
Sbjct: 290 RYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLIT 349
Query: 281 GLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTI 340
GL Q K + A + F+ MP KDM +W+ MI + + + + +ELF ++PEK+ W +
Sbjct: 350 GLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAM 409
Query: 341 IDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIIT---SCDGMVEIMQAHAMVIHLGF 397
I +V NG EAL F ML+ P T +S+++ S ++E +Q H V+ +
Sbjct: 410 ISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNI 469
Query: 398 EQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFAR 457
+ V N+L+++Y K G+ A +F + ++VS+ MI Y+ +G G AL++F+
Sbjct: 470 VNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSM 529
Query: 458 MVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAG 517
+ +SG +P+ +TF+ LLSAC H G V+ G + F S+K +YN+ +HY+C+VD+LGR+G
Sbjct: 530 LESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSG 589
Query: 518 LVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLS 577
L+++A +++ST+ P + V +LL A K H + +A +KL+ LEP S+ YV+LS
Sbjct: 590 LLDDASNLISTM-PCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLS 648
Query: 578 NAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQ 637
Y+ + + ++ K K +KK G S I +KG+ H F G+ S +EEI GF
Sbjct: 649 QLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEI-GFTL 707
Query: 638 QSLQPLM 644
+ ++ M
Sbjct: 708 KMIRKEM 714
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 185/362 (51%), Gaps = 12/362 (3%)
Query: 137 REVFDNMTERNA-FSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLV 195
R + T A F S IS + R G +EA +F QMS RS+V+W M+S +A+NG +
Sbjct: 38 RNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKM 97
Query: 196 DHARRFFDLMPEKNTIAWTAMVKSYLDNG-QFSEGYKLFLEMPERNVRSWNVMISGCLSA 254
A + FD MP + T ++ AM+ + + N + Y+LF ++PE+N S+ MI+G + A
Sbjct: 98 SKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRA 157
Query: 255 NRVDEAIHLFETMPD--RNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITA 312
R DEA L+ P R+ V+ ++SG + A + F M K++ + S+M+
Sbjct: 158 GRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHG 217
Query: 313 YVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSC-FRPCVTT 371
Y + +A LF+ + E+NV W +IDGY + G + LF+ M + + T
Sbjct: 218 YCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNT 277
Query: 372 MTSIITSCDGMV---EIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLK 428
+ + +C V E Q H +V + E + ++ N+L+++YSK G + A VF ++K
Sbjct: 278 LAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMK 337
Query: 429 SKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRR 488
+KD VSW ++I A ++F +M D +++ ++ S G +++
Sbjct: 338 NKDSVSWNSLITGLVQRKQISEAYELFEKM----PGKDMVSWTDMIKGFSGKGEISKCVE 393
Query: 489 VF 490
+F
Sbjct: 394 LF 395
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 351 bits (901), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 184/509 (36%), Positives = 299/509 (58%), Gaps = 7/509 (1%)
Query: 149 FSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQN-GLVDHARRFFDLMPE 207
F +I+ R G + AL++F M ++ +TW +++ G +++ + A + FD +PE
Sbjct: 62 FPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPE 121
Query: 208 KNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM 267
+T ++ M+ Y+ N F + F MP ++ SWN MI+G +++A LF +M
Sbjct: 122 PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM 181
Query: 268 PDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELF- 326
++N VSW AM+SG + +E A +F + P + + AW+AMIT Y+ K + A +F
Sbjct: 182 MEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFK 241
Query: 327 NLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIM 386
++ KN+ WN +I GYV N + L+LF ML RP + ++S + C + +
Sbjct: 242 DMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQ 301
Query: 387 ---QAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYA 443
Q H +V + +LI++Y K G+L A +FE++K KDVV+W AMI YA
Sbjct: 302 LGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYA 361
Query: 444 NHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKV 503
HG+ AL +F M+ + +PD ITFV +L AC+HAGLVN G F+S+ Y + +
Sbjct: 362 QHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQP 421
Query: 504 EHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLL 563
+HY+C+VD+LGRAG + EA+ ++ ++ P AV LLGAC++H N+++A +KLL
Sbjct: 422 DHYTCMVDLLGRAGKLEEALKLIRSM-PFRPHAAVFGTLLGACRVHKNVELAEFAAEKLL 480
Query: 564 SLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGE 623
L ++ GYV L+N YA++ +W++ A+VRKRMKE NV K+ G+S I+++ K H F +
Sbjct: 481 QLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSD 540
Query: 624 RSHPQVEEIYGFLQQSLQPLMRETGYTPE 652
R HP+++ I+ L++ + M+ GY PE
Sbjct: 541 RIHPELDSIHKKLKELEK-KMKLAGYKPE 568
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 188/373 (50%), Gaps = 44/373 (11%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQS 121
I I ++ EA +LFDE+P+ D SYN M++ Y++N + A++ F M +D + +
Sbjct: 100 IGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWN 159
Query: 122 AMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVT 181
M+ GYA+ G ++ ARE+F +M E+N SW ++ISGY CG E+A F R VV
Sbjct: 160 TMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVA 219
Query: 182 WTTMVSGFAQNGLVDHARRFF-DLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERN 240
WT M++G+ + V+ A F D+ KN + W AM+ Y++N + +G KLF M E
Sbjct: 220 WTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEG 279
Query: 241 VRSWNVMIS----GC--LSANRVDEAIH--LFETMPDRNHVSWTAMVSGLAQNKMVEVAR 292
+R + +S GC LSA ++ IH + ++ + + T+++S + + A
Sbjct: 280 IRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAW 339
Query: 293 KYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGE 352
K F++M KD+ AW+AMI+ GY ++G A +
Sbjct: 340 KLFEVMKKKDVVAWNAMIS-------------------------------GYAQHGNADK 368
Query: 353 ALRLFILMLRSCFRPCVTTMTSIITSCD--GMVEIMQAH--AMVIHLGFEQNTWVTNALI 408
AL LF M+ + RP T +++ +C+ G+V I A+ +MV E ++
Sbjct: 369 ALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMV 428
Query: 409 TLYSKSGDLCSAM 421
L ++G L A+
Sbjct: 429 DLLGRAGKLEEAL 441
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 161/365 (44%), Gaps = 73/365 (20%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVV 118
N+ ++ R ++A+ FD MP +DA S+N+MI Y + ++ A +F +M E++ V
Sbjct: 128 NIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEV 187
Query: 119 AQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMS-ER 177
+ +AM+ GY + G L+ A F R +WT++I+GY + + E A +F M+ +
Sbjct: 188 SWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNK 247
Query: 178 SVVTWTTMVSGFAQNGLVDHARRFFDLMPEK----------------------------- 208
++VTW M+SG+ +N + + F M E+
Sbjct: 248 NLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIH 307
Query: 209 ----------NTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVD 258
+ A T+++ Y G+ + +KLF M +++V +WN MISG D
Sbjct: 308 QIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNAD 367
Query: 259 EAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYV 314
+A+ LF M D + +++ A++ +V + YF+ +M+ Y
Sbjct: 368 KALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFE-----------SMVRDYK 416
Query: 315 DEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTS 374
E P+ + + ++D R G+ EAL+L M FRP +
Sbjct: 417 VE-------------PQPDH--YTCMVDLLGRAGKLEEALKLIRSMP---FRPHAAVFGT 458
Query: 375 IITSC 379
++ +C
Sbjct: 459 LLGAC 463
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 346 bits (887), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 205/641 (31%), Positives = 347/641 (54%), Gaps = 56/641 (8%)
Query: 26 RRRVFSQCQPIF-RFLRNFTASISISHDWSLRKRNVEIT--ILGRRGKLKEARKLFDEMP 82
R R FS I + R+F+ ++ + R V I +L RR + EAR++F+++P
Sbjct: 11 RFRAFSISHVIHGKCYRSFSVTVE------FQNREVLICNHLLSRR--IDEAREVFNQVP 62
Query: 83 QRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDN 142
Y MI Y ++ + A +F M RDVV+ ++M+ G + G ++ A ++FD
Sbjct: 63 SPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDE 122
Query: 143 MTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFF 202
M ER+ SWT++++G FR G+ ++A +LF QM + W +MV G+ Q G VD A + F
Sbjct: 123 MPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLF 182
Query: 203 DLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRS----WNVMISGCLSANRVD 258
MP KN I+WT M+ N + E LF M ++S + +I+ C +A
Sbjct: 183 KQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANA---- 238
Query: 259 EAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKL 318
A H+ V GL ++++ Y + + +++IT Y + K
Sbjct: 239 PAFHM------------GIQVHGL----IIKLGFLYEEYVS-------ASLITFYANCKR 275
Query: 319 LGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITS 378
+G++ ++F+ + V +W ++ GY N + +AL +F MLR+ P +T S + S
Sbjct: 276 IGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNS 335
Query: 379 CDGMVEI---MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSW 435
C + + + H + + LG E + +V N+L+ +YS SG++ A+ VF + K +VSW
Sbjct: 336 CSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSW 395
Query: 436 TAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKG 495
++IV A HG G A +F +M+ +PDEITF GLLSACSH G + +GR++F +
Sbjct: 396 NSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSS 455
Query: 496 AYN-LNLKVEHYSCLVDMLGRAGLVNEAMDVVS--TIPPSEIDEAVLVALLGACKLHGNI 552
N ++ K++HY+C+VD+LGR G + EA +++ + P+E+ V +ALL AC++H ++
Sbjct: 456 GINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEM---VWLALLSACRMHSDV 512
Query: 553 KVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQV 612
+ +L+ SS YVLLSN YA+ +W +++R +MK+ + K G S + +
Sbjct: 513 DRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVI 572
Query: 613 KGKNHLFFVGERSH-PQVEEIYGFLQQSLQPLMRETGYTPE 652
+GK H FF G++ H ++ E FL++ L +E GY P+
Sbjct: 573 RGKKHEFFSGDQPHCSRIYEKLEFLREKL----KELGYAPD 609
Score = 212 bits (539), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 141/439 (32%), Positives = 228/439 (51%), Gaps = 23/439 (5%)
Query: 136 AREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLV 195
+R +F R AFS + +I G +C R+ + + R V+ ++S +
Sbjct: 3 SRAIFQRFRFR-AFSISHVIHG--KCYRS---FSVTVEFQNREVLICNHLLSR-----RI 51
Query: 196 DHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSAN 255
D AR F+ +P + +T M+ Y + + + LF EMP R+V SWN MISGC+
Sbjct: 52 DEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECG 111
Query: 256 RVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVD 315
++ A+ LF+ MP+R+ VSWTAMV+G ++ V+ A + F MP KD AAW++M+ Y+
Sbjct: 112 DMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQ 171
Query: 316 EKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSI 375
+ +AL+LF +P KNV W T+I G +N +GEAL LF MLR C + T +
Sbjct: 172 FGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCV 231
Query: 376 ITSCDGMVEI---MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDV 432
IT+C +Q H ++I LGF +V+ +LIT Y+ + + VF+ + V
Sbjct: 232 ITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQV 291
Query: 433 VSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDS 492
WTA++ Y+ + AL +F+ M+ + P++ TF L++CS G ++ G+ +
Sbjct: 292 AVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGV 351
Query: 493 IKGAYNLNLKVEHY--SCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHG 550
A L L+ + + + LV M +G VN+A+ V I I +++ C HG
Sbjct: 352 ---AVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSI--VSWNSIIVGCAQHG 406
Query: 551 NIKVANSIGQKLLSL--EP 567
K A I +++ L EP
Sbjct: 407 RGKWAFVIFGQMIRLNKEP 425
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 202/656 (30%), Positives = 335/656 (51%), Gaps = 59/656 (8%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFK--AMSERD 116
N I + + +L AR+LFDE+ + D ++ +M++ Y + D+ A +F+ + RD
Sbjct: 53 NRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRD 112
Query: 117 VVAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISG--------------- 157
V +AM+ G++ +A +F M + F++ S+++G
Sbjct: 113 TVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFH 172
Query: 158 ---------------------YFRCGRTEEAL----QLFDQMSERSVVTWTTMVSGFAQN 192
Y +C + L ++FD++ E+ +WTTM++G+ +N
Sbjct: 173 AAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKN 232
Query: 193 GLVDHARRFFDLMPEK-NTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVR----SWNVM 247
G D + M + +A+ AM+ Y++ G + E ++ M + ++ +
Sbjct: 233 GYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSV 292
Query: 248 ISGCLSANRVDEAIHLFETMPDRNHVSW---TAMVSGLAQNKMVEVARKYFDIMPFKDMA 304
I C +A + + + R S+ ++VS + + AR F+ MP KD+
Sbjct: 293 IRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLV 352
Query: 305 AWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSC 364
+W+A+++ YV +GEA +F + EKN+ W +I G NG E L+LF M R
Sbjct: 353 SWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREG 412
Query: 365 FRPCVTTMTSIITSC---DGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAM 421
F PC + I SC Q HA ++ +GF+ + NALIT+Y+K G + A
Sbjct: 413 FEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEAR 472
Query: 422 LVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAG 481
VF + D VSW A+I A HGHG A+ V+ M+ G +PD IT + +L+ACSHAG
Sbjct: 473 QVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAG 532
Query: 482 LVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVA 541
LV+QGR+ FDS++ Y + +HY+ L+D+L R+G ++A V+ ++P E + A
Sbjct: 533 LVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAE-IWEA 591
Query: 542 LLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNV 601
LL C++HGN+++ KL L P G Y+LLSN +AA QW+E A+VRK M+++ V
Sbjct: 592 LLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGV 651
Query: 602 KKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPENSLLI 657
KK S I+++ + H F V + SHP+ E +Y +LQ L MR GY P+ S ++
Sbjct: 652 KKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQD-LGKEMRRLGYVPDTSFVL 706
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 163/333 (48%), Gaps = 27/333 (8%)
Query: 52 DWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKA 111
D+S N +++ + GK EAR +F++MP +D VS+N++++ Y+ + + A+ IFK
Sbjct: 317 DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKE 376
Query: 112 MSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFR--------CGR 163
M E+++++ M+ G A+ G + ++F M SG + C
Sbjct: 377 MKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436
Query: 164 TEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDN 223
+ QL + S+ +++ +A+ G+V+ AR+ F MP ++++W A++ + +
Sbjct: 437 QQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQH 496
Query: 224 GQFSEGYKLFLEMPERNVRSWNV----MISGCLSANRVDEAIHLFETM-------PDRNH 272
G +E ++ EM ++ +R + +++ C A VD+ F++M P +H
Sbjct: 497 GHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADH 556
Query: 273 VSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAA-WSAMITA---YVDEKL-LGEALELFN 327
+ ++ L ++ A + +PFK A W A+++ + + +L + A +LF
Sbjct: 557 --YARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFG 614
Query: 328 LVPEKNVGIWNTIIDGYVRNGEAGEALRLFILM 360
L+PE + G + + + + G+ E R+ LM
Sbjct: 615 LIPEHD-GTYMLLSNMHAATGQWEEVARVRKLM 646
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 102/212 (48%), Gaps = 19/212 (8%)
Query: 47 ISISHDWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAE 106
+ I D SL N IT+ + G ++EAR++F MP D+VS+N++IA ++ HGAE
Sbjct: 444 LKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHG--HGAE 501
Query: 107 T--IFKAMSER----DVVAQSAMVDGYAKAGRLDNAREVFDNM-----TERNAFSWTSLI 155
+++ M ++ D + ++ + AG +D R+ FD+M A + LI
Sbjct: 502 AVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLI 561
Query: 156 SGYFRCGRTEEALQLFDQMSERSVV-TWTTMVSGFAQNGLVD----HARRFFDLMPEKNT 210
R G+ +A + + + + W ++SG +G ++ A + F L+PE +
Sbjct: 562 DLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDG 621
Query: 211 IAWTAMVKSYLDNGQFSEGYKLFLEMPERNVR 242
+ + + GQ+ E ++ M +R V+
Sbjct: 622 -TYMLLSNMHAATGQWEEVARVRKLMRDRGVK 652
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 338 bits (867), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 210/647 (32%), Positives = 348/647 (53%), Gaps = 56/647 (8%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQS 121
+ + + G ARKLFDEMP R A S+N++++ Y K D+ F + +RD V+ +
Sbjct: 56 MNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWT 115
Query: 122 AMVDGYAKAGRLDNAREVFDNMT----ERNAFSWTSLISGY--FRCGRTEEALQLFD-QM 174
M+ GY G+ A V +M E F+ T++++ RC T + + F ++
Sbjct: 116 TMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKL 175
Query: 175 SERSVVTWT-TMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLF 233
R V+ + ++++ +A+ G A+ FD M ++ +W AM+ ++ GQ F
Sbjct: 176 GLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQF 235
Query: 234 LEMPERNVRSWNVMISGCLSANRVDEAIHLFETM-------PDR---------------- 270
+M ER++ +WN MISG A+ +F M PDR
Sbjct: 236 EQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKL 295
Query: 271 -------NHVSWTAM-VSGLAQNKM---------VEVARKYFDIMPFKDMA--AWSAMIT 311
+H+ T +SG+ N + VE AR+ + KD+ ++A++
Sbjct: 296 CIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLD 355
Query: 312 AYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTT 371
Y+ + +A +F + +++V W +I GY ++G GEA+ LF M+ RP T
Sbjct: 356 GYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYT 415
Query: 372 MTSIITSCDGMVEIM---QAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLK 428
+ ++++ + + Q H + G + V+NALIT+Y+K+G++ SA F+L++
Sbjct: 416 LAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIR 475
Query: 429 -SKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGR 487
+D VSWT+MI+A A HGH AL++F M+ G +PD IT+VG+ SAC+HAGLVNQGR
Sbjct: 476 CERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGR 535
Query: 488 RVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACK 547
+ FD +K + + HY+C+VD+ GRAGL+ EA + + +P E D +LL AC+
Sbjct: 536 QYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPI-EPDVVTWGSLLSACR 594
Query: 548 LHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGF 607
+H NI + ++LL LEP +SG Y L+N Y+A +W+E A++RK MK+ VKK GF
Sbjct: 595 VHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGF 654
Query: 608 SQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPENS 654
S I+VK K H+F V + +HP+ EIY +++ + +++ GY P+ +
Sbjct: 655 SWIEVKHKVHVFGVEDGTHPEKNEIYMTMKK-IWDEIKKMGYVPDTA 700
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 226/457 (49%), Gaps = 49/457 (10%)
Query: 153 SLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIA 212
+L++ Y + G A +LFD+M R+ +W T++S +++ G +D FFD +P++++++
Sbjct: 54 NLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVS 113
Query: 213 WTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCL---SANRVDEA---IHLF-E 265
WT M+ Y + GQ+ + ++ +M + + ++ L +A R E +H F
Sbjct: 114 WTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIV 173
Query: 266 TMPDRNHVSWT-AMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALE 324
+ R +VS + ++++ A+ +A+ FD M +D+++W+AMI ++ + A+
Sbjct: 174 KLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMA 233
Query: 325 LFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLR-SCFRPCVTTMTSIITSCDGMV 383
F + E+++ WN++I G+ + G AL +F MLR S P T+ S++++C +
Sbjct: 234 QFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLE 293
Query: 384 EIM---QAHAMVIHLGFEQNTWVTNALITLYS---------------------------- 412
++ Q H+ ++ GF+ + V NALI++YS
Sbjct: 294 KLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTAL 353
Query: 413 -----KSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDE 467
K GD+ A +F LK +DVV+WTAMIV Y HG A+ +F MV G +P+
Sbjct: 354 LDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNS 413
Query: 468 ITFVGLLSACSHAGLVNQGRRVFDS-IKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVV 526
T +LS S ++ G+++ S +K ++ V + L+ M +AG + A
Sbjct: 414 YTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVS--NALITMYAKAGNITSASRAF 471
Query: 527 STIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLL 563
I E D +++ A HG+ + A + + +L
Sbjct: 472 DLI-RCERDTVSWTSMIIALAQHGHAEEALELFETML 507
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 322 bits (824), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 210/651 (32%), Positives = 340/651 (52%), Gaps = 79/651 (12%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAM---------------- 112
G LKEA ++FDE+ A+ +N ++ K+ D G+ +FK M
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS 202
Query: 113 ------------------------SERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNA 148
ER+ V S +V Y K R+D+AR+VFD MTER+
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERNSVGNS-LVAFYLKNQRVDSARKVFDEMTERDV 261
Query: 149 FSWTSLISGYFRCGRTEEALQLFDQMSERSV-VTWTTMVSGFAQNGLVDHARRFFDLMPE 207
SW S+I+GY G E+ L +F QM + + T+VS FA G D R L
Sbjct: 262 ISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFA--GCADS--RLISLGRA 317
Query: 208 KNTIAWTA-----------MVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANR 256
++I A ++ Y G +F EM +R+V S+ MI+G
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 377
Query: 257 VDEAIHLFETM------PDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMA----AW 306
EA+ LFE M PD V TA+++ A+ ++++ ++ + + D+
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTV--TAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS 435
Query: 307 SAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSC-F 365
+A++ Y + EA +F+ + K++ WNTII GY +N A EAL LF L+L F
Sbjct: 436 NALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRF 495
Query: 366 RPCVTTMTSIITSCDGMVEI---MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAML 422
P T+ ++ +C + + H ++ G+ + V N+L+ +Y+K G L A +
Sbjct: 496 SPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHM 555
Query: 423 VFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGL 482
+F+ + SKD+VSWT MI Y HG G A+ +F +M +G + DEI+FV LL ACSH+GL
Sbjct: 556 LFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGL 615
Query: 483 VNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVST--IPPSEIDEAVLV 540
V++G R F+ ++ + VEHY+C+VDML R G + +A + IPP D +
Sbjct: 616 VDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPP---DATIWG 672
Query: 541 ALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKN 600
ALL C++H ++K+A + +K+ LEP ++G YVL++N YA E+W++ ++RKR+ ++
Sbjct: 673 ALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRG 732
Query: 601 VKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTP 651
++K G S I++KG+ ++F G+ S+P+ E I FL++ ++ M E GY+P
Sbjct: 733 LRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRK-VRARMIEEGYSP 782
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 202/450 (44%), Gaps = 66/450 (14%)
Query: 128 AKAGRLDNAREVFDNMTERNAFSWTSLISG-----YFRCGRTEEALQLFDQMSERSVVTW 182
A + L + +EV DN N F S + Y CG +EA ++FD++ + W
Sbjct: 105 ADSKSLKDGKEV-DNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFW 163
Query: 183 TTMVSGFAQNGLVDHARRFFDLM----PEKNTIAWTAMVKSY-----LDNGQFSEGYKLF 233
+++ A++G + F M E ++ ++ + KS+ + G+ G+ L
Sbjct: 164 NILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILK 223
Query: 234 LEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARK 293
ERN N +++ L RVD A +F+ M +R+ +SW ++++G N + E
Sbjct: 224 SGFGERNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 282
Query: 294 YFDIMPFK----DMAAWSAMITAYVDEKL--LGEALE----------------------- 324
F M D+A ++ D +L LG A+
Sbjct: 283 VFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYS 342
Query: 325 ----------LFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTS 374
+F + +++V + ++I GY R G AGEA++LF M P V T+T+
Sbjct: 343 KCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTA 402
Query: 375 IITSCDG---MVEIMQAHAMVIH--LGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKS 429
++ C + E + H + LGF+ +V+NAL+ +Y+K G + A LVF ++
Sbjct: 403 VLNCCARYRLLDEGKRVHEWIKENDLGFD--IFVSNALMDMYAKCGSMQEAELVFSEMRV 460
Query: 430 KDVVSWTAMIVAYANHGHGHHALQVFARMVTSGT-KPDEITFVGLLSACSHAGLVNQGRR 488
KD++SW +I Y+ + + + AL +F ++ PDE T +L AC+ ++GR
Sbjct: 461 KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGRE 520
Query: 489 VFDSI-KGAYNLNLKVEHYSCLVDMLGRAG 517
+ I + Y + V + LVDM + G
Sbjct: 521 IHGYIMRNGYFSDRHVANS--LVDMYAKCG 548
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 319 bits (817), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 192/577 (33%), Positives = 320/577 (55%), Gaps = 35/577 (6%)
Query: 105 AETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTE----RNAFSWTSLISGYFR 160
A ++FK + E +++ + M G+A + +A +++ M N++++ ++ +
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 161 CGRTEEALQLFDQM----SERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAM 216
+E Q+ + + + T+++S + QNG ++ A + FD P ++ +++TA+
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 217 VKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM------PDR 270
+K Y G KLF E+P ++V SWN MISG EA+ LF+ M PD
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266
Query: 271 NHVSWTAMVSGLAQNKMVEVARK---YFDIMPF-KDMAAWSAMITAYVDEKLLGEALELF 326
+ + +VS AQ+ +E+ R+ + D F ++ +A+I Y L A LF
Sbjct: 267 S--TMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 324
Query: 327 NLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCD--GMVE 384
+P K+V WNT+I GY EAL LF MLRS P TM SI+ +C G ++
Sbjct: 325 ERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 384
Query: 385 IMQAHAMVIHLGFEQN-TWVTNA------LITLYSKSGDLCSAMLVFELLKSKDVVSWTA 437
I IH+ ++ VTNA LI +Y+K GD+ +A VF + K + SW A
Sbjct: 385 I----GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNA 440
Query: 438 MIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAY 497
MI +A HG + +F+RM G +PD+ITFVGLLSACSH+G+++ GR +F ++ Y
Sbjct: 441 MIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDY 500
Query: 498 NLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANS 557
+ K+EHY C++D+LG +GL EA ++++ + D + +LL ACK+HGN+++ S
Sbjct: 501 KMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEP-DGVIWCSLLKACKMHGNVELGES 559
Query: 558 IGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNH 617
+ L+ +EP + G YVLLSN YA+ +W+E A+ R + +K +KK+ G S I++ H
Sbjct: 560 FAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVH 619
Query: 618 LFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPENS 654
F +G++ HP+ EIYG L++ ++ L+ + G+ P+ S
Sbjct: 620 EFIIGDKFHPRNREIYGMLEE-MEVLLEKAGFVPDTS 655
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 162/322 (50%), Gaps = 22/322 (6%)
Query: 85 DAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMT 144
D + S+I++Y++N + A +F RDVV+ +A++ GYA G ++NA+++FD +
Sbjct: 168 DLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIP 227
Query: 145 ERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHARR 200
++ SW ++ISGY G +EAL+LF M + +V T T+VS AQ+G ++ R+
Sbjct: 228 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ 287
Query: 201 FFDLMPE----KNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANR 256
+ + N A++ Y G+ LF +P ++V SWN +I G N
Sbjct: 288 VHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNL 347
Query: 257 VDEAIHLFETM----PDRNHVSWTAMVSGLAQNKMVEVAR---KYFDIMPFKDMAAWSAM 309
EA+ LF+ M N V+ +++ A +++ R Y D K + S++
Sbjct: 348 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID-KRLKGVTNASSL 406
Query: 310 ITAYVDEKL----LGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCF 365
T+ +D + A ++FN + K++ WN +I G+ +G A + LF M +
Sbjct: 407 RTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGI 466
Query: 366 RPCVTTMTSIITSC--DGMVEI 385
+P T ++++C GM+++
Sbjct: 467 QPDDITFVGLLSACSHSGMLDL 488
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 16/214 (7%)
Query: 54 SLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAM- 112
+L+ N I + + G+L+ A LF+ +P +D +S+N++I Y A +F+ M
Sbjct: 300 NLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEML 359
Query: 113 ----SERDVVAQSAMVDGYAKAGRLDNAREVFDNMTER-----NAFSW-TSLISGYFRCG 162
+ DV S ++ A G +D R + + +R NA S TSLI Y +CG
Sbjct: 360 RSGETPNDVTMLS-ILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCG 418
Query: 163 RTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMP----EKNTIAWTAMVK 218
E A Q+F+ + +S+ +W M+ GFA +G D + F M + + I + ++
Sbjct: 419 DIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLS 478
Query: 219 SYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCL 252
+ +G G +F M + + + GC+
Sbjct: 479 ACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCM 512
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 319 bits (817), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 165/451 (36%), Positives = 256/451 (56%), Gaps = 33/451 (7%)
Query: 195 VDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSA 254
V A + F+ M E++T++W +M+ + G+ + +LF EMP+R++ SWN M+ G
Sbjct: 170 VRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARC 229
Query: 255 NRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYV 314
+ +A LFE MP+RN VSW+ MV G ++ +E+AR FD MP
Sbjct: 230 REMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMP--------------- 274
Query: 315 DEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTS 374
+P KNV W II GY G EA RL M+ S + + S
Sbjct: 275 --------------LPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVIS 320
Query: 375 IITSC--DGMVEI-MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKD 431
I+ +C G++ + M+ H+++ N +V NAL+ +Y+K G+L A VF + KD
Sbjct: 321 ILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKD 380
Query: 432 VVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFD 491
+VSW M+ HGHG A+++F+RM G +PD++TF+ +L +C+HAGL+++G F
Sbjct: 381 LVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFY 440
Query: 492 SIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGN 551
S++ Y+L +VEHY CLVD+LGR G + EA+ VV T+ P E + + ALLGAC++H
Sbjct: 441 SMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTM-PMEPNVVIWGALLGACRMHNE 499
Query: 552 IKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQ 611
+ +A + L+ L+P G Y LLSN YAA E W+ A +R +MK V+K SG S ++
Sbjct: 500 VDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVE 559
Query: 612 VKGKNHLFFVGERSHPQVEEIYGFLQQSLQP 642
++ H F V ++SHP+ ++IY L ++P
Sbjct: 560 LEDGIHEFTVFDKSHPKSDQIYQMLGSLIEP 590
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 170/364 (46%), Gaps = 63/364 (17%)
Query: 35 PIFRFLRNFTASISISHDWSLRKRNVEITILGRRGKL--KEARKLFDEMPQRDAVSYNSM 92
P+ + + N + +S D + N I R G L ++A KLF++M +RD VS+NSM
Sbjct: 134 PVVKMMHNHIEKLGLSSD--IYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSM 191
Query: 93 IAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWT 152
+ +K ++ A +F M +RD+++ + M+DGYA+ + A E+F+ M ERN SW+
Sbjct: 192 LGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWS 251
Query: 153 SLISGYFRCGRTEEALQLFDQM--SERSVVTWTTMVSGFAQNGLVDHARRFFDLMPE--- 207
+++ GY + G E A +FD+M ++VVTWT +++G+A+ GL+ A R D M
Sbjct: 252 TMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGL 311
Query: 208 ------------------------------------KNTIAWTAMVKSYLDNGQFSEGYK 231
N A++ Y G + +
Sbjct: 312 KFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFD 371
Query: 232 LFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM------PDRNHVSWTAMVSGLAQN 285
+F ++P++++ SWN M+ G EAI LF M PD+ V++ A++
Sbjct: 372 VFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDK--VTFIAVLCSCNHA 429
Query: 286 KMVEVARKYF-------DIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVP-EKNVGIW 337
+++ YF D++P + + ++ L EA+++ +P E NV IW
Sbjct: 430 GLIDEGIDYFYSMEKVYDLVP--QVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIW 487
Query: 338 NTII 341
++
Sbjct: 488 GALL 491
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 315 bits (806), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 214/689 (31%), Positives = 344/689 (49%), Gaps = 102/689 (14%)
Query: 67 RRGKLKEARKL-FDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAM---SERDVVAQSA 122
R GKL AR + FD P D+V YNS+I++Y K+ D AE +F+ M +RDVV+ SA
Sbjct: 79 RLGKLVHARLIEFDIEP--DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSA 136
Query: 123 MVDGYAKAGRLDNAREVFDNMTE----RNAFSWTSLI-----SGYFRCGRT--------- 164
M+ Y GR +A +VF E N + +T++I S + GR
Sbjct: 137 MMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTG 196
Query: 165 -----------------------EEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRF 201
E A ++FD+MSE +VVTWT M++ Q G A RF
Sbjct: 197 HFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRF 256
Query: 202 F--------------------------DLMPEKNTIAWT-----------AMVKSYLD-- 222
F +L K +W ++V Y
Sbjct: 257 FLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCS 316
Query: 223 -NGQFSEGYKLFLEMPERNVRSWNVMISGCL-SANRVDEAIHLFETM-----PDRNHVSW 275
+G + K+F M + +V SW +I+G + + N EAI+LF M + NH ++
Sbjct: 317 ADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTF 376
Query: 276 TAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAM----ITAYVDEKLLGEALELFNLVPE 331
++ V ++ + +A+ S++ I+ +V + +A F + E
Sbjct: 377 SSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSE 436
Query: 332 KNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIM---QA 388
KN+ +NT +DG RN +A +L + T S+++ + I Q
Sbjct: 437 KNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQI 496
Query: 389 HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHG 448
H+ V+ LG N V NALI++YSK G + +A VF +++++V+SWT+MI +A HG
Sbjct: 497 HSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFA 556
Query: 449 HHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSC 508
L+ F +M+ G KP+E+T+V +LSACSH GLV++G R F+S+ + + K+EHY+C
Sbjct: 557 IRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYAC 616
Query: 509 LVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPT 568
+VD+L RAGL+ +A + ++T+ P + D V LGAC++H N ++ +K+L L+P
Sbjct: 617 MVDLLCRAGLLTDAFEFINTM-PFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPN 675
Query: 569 SSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQ 628
Y+ LSN YA +W+E ++R++MKE+N+ K G S I+V K H F+VG+ +HP
Sbjct: 676 EPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPN 735
Query: 629 VEEIYGFLQQSLQPLMRETGYTPENSLLI 657
+IY L + + + R GY P+ L++
Sbjct: 736 AHQIYDELDRLITEIKR-CGYVPDTDLVL 763
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 86/161 (53%), Gaps = 7/161 (4%)
Query: 334 VGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVT-TMTSIITSCDGMVEIMQA---H 389
+ + + +I ++ G+ A+ LM R RP + T +S++ SC + H
Sbjct: 26 INVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVH 85
Query: 390 AMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLK---SKDVVSWTAMIVAYANHG 446
A +I E ++ + N+LI+LYSKSGD A VFE ++ +DVVSW+AM+ Y N+G
Sbjct: 86 ARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNG 145
Query: 447 HGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGR 487
A++VF + G P++ + ++ ACS++ V GR
Sbjct: 146 RELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGR 186
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 313 bits (801), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 170/490 (34%), Positives = 284/490 (57%), Gaps = 16/490 (3%)
Query: 183 TTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVR 242
T + +A G +++AR FD M ++ + W M++ Y G E +KLF EM + NV
Sbjct: 150 TGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVM 209
Query: 243 SWNVMISGCLSAN------RVDEAIHLFETMPD---RNHVSWTAMVSGLAQNKMVEVARK 293
+++ +SA R + AI+ F D H+ TA+V+ A +++AR+
Sbjct: 210 PDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHL-LTALVTMYAGAGCMDMARE 268
Query: 294 YFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEA 353
+F M +++ +AM++ Y L +A +F+ +K++ W T+I YV + EA
Sbjct: 269 FFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEA 328
Query: 354 LRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQA---HAMVIHLGFEQNTWVTNALITL 410
LR+F M S +P V +M S+I++C + + +A H+ + G E + NALI +
Sbjct: 329 LRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINM 388
Query: 411 YSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITF 470
Y+K G L + VFE + ++VVSW++MI A + HG AL +FARM +P+E+TF
Sbjct: 389 YAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTF 448
Query: 471 VGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIP 530
VG+L CSH+GLV +G+++F S+ YN+ K+EHY C+VD+ GRA L+ EA++V+ ++P
Sbjct: 449 VGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMP 508
Query: 531 PSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFA 590
+ + + +L+ AC++HG +++ +++L LEP G VL+SN YA E++W++
Sbjct: 509 VAS-NVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVR 567
Query: 591 QVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYT 650
+R+ M+EKNV K G S+I GK+H F +G++ H Q EIY L + + L + GY
Sbjct: 568 NIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKL-KLAGYV 626
Query: 651 PE-NSLLIDT 659
P+ S+L+D
Sbjct: 627 PDCGSVLVDV 636
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 158/371 (42%), Gaps = 92/371 (24%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQ-------- 120
G++ AR +FDEM RD V++N+MI Y + V A +F+ M + +V+
Sbjct: 160 GRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIV 219
Query: 121 -------------------------------SAMVDGYAKAGRLDNAREVFDNMTERNAF 149
+A+V YA AG +D ARE F M+ RN F
Sbjct: 220 SACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLF 279
Query: 150 SWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLM---- 205
T+++SGY +CGR ++A +FDQ ++ +V WTTM+S + ++ A R F+ M
Sbjct: 280 VSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSG 339
Query: 206 --PEK----------------NTIAWT-----------------AMVKSYLDNGQFSEGY 230
P+ + W A++ Y G
Sbjct: 340 IKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATR 399
Query: 231 KLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMP----DRNHVSWTAMVSGLAQNK 286
+F +MP RNV SW+ MI+ +A+ LF M + N V++ ++ G + +
Sbjct: 400 DVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSG 459
Query: 287 MVEVARKYF-------DIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVP-EKNVGIWN 338
+VE +K F +I P + + M+ + LL EALE+ +P NV IW
Sbjct: 460 LVEEGKKIFASMTDEYNITP--KLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWG 517
Query: 339 TIIDGYVRNGE 349
+++ +GE
Sbjct: 518 SLMSACRIHGE 528
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 188/425 (44%), Gaps = 65/425 (15%)
Query: 78 FDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAR 137
F +P AVS ++ + ++HG FK + D ++ +D YA GR++ AR
Sbjct: 112 FSFLPILKAVS---KVSALFEGMELHG--VAFKIATLCDPFVETGFMDMYASCGRINYAR 166
Query: 138 EVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVT---------------- 181
VFD M+ R+ +W ++I Y R G +EA +LF++M + +V+
Sbjct: 167 NVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTG 226
Query: 182 -----------------------WTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVK 218
T +V+ +A G +D AR FF M +N TAMV
Sbjct: 227 NMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVS 286
Query: 219 SYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM------PDRNH 272
Y G+ + +F + ++++ W MIS + ++ EA+ +FE M PD
Sbjct: 287 GYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDV-- 344
Query: 273 VSWTAMVSGLAQNKMVEVARKYFDIMPFK----DMAAWSAMITAYVDEKLLGEALELFNL 328
VS +++S A +++ A+ + +++ +A+I Y L ++F
Sbjct: 345 VSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEK 404
Query: 329 VPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC--DGMVEIM 386
+P +NV W+++I+ +GEA +AL LF M + P T ++ C G+VE
Sbjct: 405 MPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVE-- 462
Query: 387 QAHAMVIHLGFEQNTWVT----NALITLYSKSGDLCSAMLVFELLK-SKDVVSWTAMIVA 441
+ + + E N ++ L+ ++ L A+ V E + + +VV W +++ A
Sbjct: 463 EGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSA 522
Query: 442 YANHG 446
HG
Sbjct: 523 CRIHG 527
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 137/302 (45%), Gaps = 37/302 (12%)
Query: 295 FDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEAL 354
F I D + + Y + A +F+ + ++V WNT+I+ Y R G EA
Sbjct: 138 FKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAF 197
Query: 355 RLFILMLRSCFRPCVTTMTSIITSC-------------DGMVE--------------IMQ 387
+LF M S P + +I+++C + ++E M
Sbjct: 198 KLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMY 257
Query: 388 AHAMVIHLGFE-------QNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIV 440
A A + + E +N +V+ A+++ YSK G L A ++F+ + KD+V WT MI
Sbjct: 258 AGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMIS 317
Query: 441 AYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLN 500
AY + AL+VF M SG KPD ++ ++SAC++ G++++ + V I L
Sbjct: 318 AYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIH-VNGLE 376
Query: 501 LKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQ 560
++ + L++M + G ++ DV +P + +++ A +HG A S+
Sbjct: 377 SELSINNALINMYAKCGGLDATRDVFEKMPRRNV--VSWSSMINALSMHGEASDALSLFA 434
Query: 561 KL 562
++
Sbjct: 435 RM 436
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 90/210 (42%), Gaps = 15/210 (7%)
Query: 322 ALELFNLVPEKNVGI-WNTIIDGYVRNGEAGEALRLFILMLRSC--------FRPCVTTM 372
AL +F+ +P I +N + R+ E A LF +R F P + +
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEP-RATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 373 TSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDV 432
+ + + E M+ H + + + +V + +Y+ G + A VF+ + +DV
Sbjct: 122 SKV----SALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDV 177
Query: 433 VSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDS 492
V+W MI Y G A ++F M S PDE+ ++SAC G + R +++
Sbjct: 178 VTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEF 237
Query: 493 IKGAYNLNLKVEHYSCLVDMLGRAGLVNEA 522
+ ++ + + LV M AG ++ A
Sbjct: 238 LI-ENDVRMDTHLLTALVTMYAGAGCMDMA 266
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 95/197 (48%), Gaps = 15/197 (7%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDV- 117
N I + + G L R +F++MP+R+ VS++SMI + + A ++F M + +V
Sbjct: 383 NALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVE 442
Query: 118 ---VAQSAMVDGYAKAGRLDNAREVFDNMTERNAFS-----WTSLISGYFRCGRTEEALQ 169
V ++ G + +G ++ +++F +MT+ + + ++ + R EAL+
Sbjct: 443 PNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALE 502
Query: 170 LFDQMSERS-VVTWTTMVSGFAQNGLVD----HARRFFDLMPEKNTIAWTAMVKSYLDNG 224
+ + M S VV W +++S +G ++ A+R +L P+ + A M Y
Sbjct: 503 VIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDG-ALVLMSNIYAREQ 561
Query: 225 QFSEGYKLFLEMPERNV 241
++ + + M E+NV
Sbjct: 562 RWEDVRNIRRVMEEKNV 578
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 312 bits (800), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 194/639 (30%), Positives = 314/639 (49%), Gaps = 87/639 (13%)
Query: 100 KDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYF 159
K +HG I +A+ + + +V YA AR VFD + + N FSW +L+ Y
Sbjct: 26 KMIHG--NIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYS 83
Query: 160 RCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMP------------- 206
+ G E F+++ +R VTW ++ G++ +GLV A + ++ M
Sbjct: 84 KAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLM 143
Query: 207 ---------------------------EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPER 239
E + + ++ Y + G S+ K+F + +R
Sbjct: 144 TMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR 203
Query: 240 NVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYF---- 295
N +N ++ G L+ +++A+ LF M +++ VSW AM+ GLAQN + + A + F
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMK 262
Query: 296 ------------DIMP----------------------FKD-MAAWSAMITAYVDEKLLG 320
++P F+D + SA+I Y K L
Sbjct: 263 VQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLH 322
Query: 321 EALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC- 379
A +F+ + +KNV W ++ GY + G A EA+++F+ M RS P T+ I++C
Sbjct: 323 YAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACA 382
Query: 380 --DGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTA 437
+ E Q H I G V+N+L+TLY K GD+ + +F + +D VSWTA
Sbjct: 383 NVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTA 442
Query: 438 MIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAY 497
M+ AYA G +Q+F +MV G KPD +T G++SACS AGLV +G+R F + Y
Sbjct: 443 MVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEY 502
Query: 498 NLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANS 557
+ + HYSC++D+ R+G + EAM ++ +P D LL AC+ GN+++
Sbjct: 503 GIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPP-DAIGWTTLLSACRNKGNLEIGKW 561
Query: 558 IGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNH 617
+ L+ L+P GY LLS+ YA++ +WD AQ+R+ M+EKNVKK G S I+ KGK H
Sbjct: 562 AAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLH 621
Query: 618 LFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPENSLL 656
F + S P +++IY L++ L + + GY P+ S +
Sbjct: 622 SFSADDESSPYLDQIYAKLEE-LNNKIIDNGYKPDTSFV 659
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 197/475 (41%), Gaps = 84/475 (17%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYA 128
G + +A+K+F + R+ V YNS++ L + A +F+ M E+D V+ +AM+ G A
Sbjct: 188 GCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLA 246
Query: 129 KAGRLDNAREVFDNMT---------------------------------------ERNAF 149
+ G A E F M + + +
Sbjct: 247 QNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIY 306
Query: 150 SWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLM---- 205
++LI Y +C A +FD+M +++VV+WT MV G+ Q G + A + F M
Sbjct: 307 VGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSG 366
Query: 206 --PEKNT----IAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDE 259
P+ T I+ A V S + QF K V N +++ +D+
Sbjct: 367 IDPDHYTLGQAISACANVSSLEEGSQFHG--KAITSGLIHYVTVSNSLVTLYGKCGDIDD 424
Query: 260 AIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMP----FKDMAAWSAMITAYVD 315
+ LF M R+ VSWTAMVS AQ + FD M D + +I+A
Sbjct: 425 STRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSR 484
Query: 316 EKLLGEALELFNLVPEK-----NVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVT 370
L+ + F L+ + ++G ++ +ID + R+G EA+R M F P
Sbjct: 485 AGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP---FPPDAI 541
Query: 371 TMTSIITSC--DGMVEIMQ-AHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELL 427
T+++++C G +EI + A +I L T L ++Y+ G S + +
Sbjct: 542 GWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYT-LLSSIYASKGKWDSVAQLRRGM 600
Query: 428 KSKDV--------VSWTAMIVAYANHGHGHHAL-QVFARM-------VTSGTKPD 466
+ K+V + W + +++ L Q++A++ + +G KPD
Sbjct: 601 REKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPD 655
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSER--- 115
N +T+ G+ G + ++ +LF+EM RDAVS+ +M++ Y + +F M +
Sbjct: 410 NSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLK 469
Query: 116 -DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAF-----SWTSLISGYFRCGRTEEALQ 169
D V + ++ ++AG ++ + F MT ++ +I + R GR EEA++
Sbjct: 470 PDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMR 529
Query: 170 LFDQMS-ERSVVTWTTMVSGFAQNGLVD----HARRFFDLMPEKNTIAWTAMVKSYLDNG 224
+ M + WTT++S G ++ A +L P + +T + Y G
Sbjct: 530 FINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPH-HPAGYTLLSSIYASKG 588
Query: 225 QFSEGYKLFLEMPERNVR 242
++ +L M E+NV+
Sbjct: 589 KWDSVAQLRRGMREKNVK 606
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 308 bits (790), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 196/650 (30%), Positives = 328/650 (50%), Gaps = 85/650 (13%)
Query: 67 RRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMS------------- 113
+ G L EAR LF+ MP+R+ V+ N+M+ Y+K + ++ A T+F+ M
Sbjct: 89 KTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTAL 148
Query: 114 -----------------ERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLIS 156
ER+VV+ + +V G + G ++ A++VFD M R+ SW ++I
Sbjct: 149 CDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIK 208
Query: 157 GYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAM 216
GY EEA LF MSE++VVTWT+MV G+ + G V A R F MPE+N ++WTAM
Sbjct: 209 GYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAM 268
Query: 217 VKSYLDNGQFSEGYKLFLEMPER------NVRSWNVMISGC----LSANRVDEAIHL--- 263
+ + N + E LFLEM + N + + C + R+ E +H
Sbjct: 269 ISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVI 328
Query: 264 ---FETMPDRNHV----------------------------SWTAMVSGLAQNKMVEVAR 292
+ET+ + S +++ +N +E A
Sbjct: 329 SNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAE 388
Query: 293 KYFD-IMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAG 351
F+ + D +W++MI Y++ + A LF + +K+ W +I G V+N
Sbjct: 389 TLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFA 448
Query: 352 EALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQA---HAMVIHLG--FEQNTWVTNA 406
EA L M+R +P +T + +++S + Q H ++ ++ + + N+
Sbjct: 449 EAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNS 508
Query: 407 LITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPD 466
L+++Y+K G + A +F + KD VSW +MI+ ++HG AL +F M+ SG KP+
Sbjct: 509 LVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPN 568
Query: 467 EITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVV 526
+TF+G+LSACSH+GL+ +G +F ++K Y++ ++HY ++D+LGRAG + EA + +
Sbjct: 569 SVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFI 628
Query: 527 STIPPSEIDEAVLVALLGACKLHGNIKVANSIGQ----KLLSLEPTSSGGYVLLSNAYAA 582
S +P + D V ALLG C L+ K A I + +LL L+P ++ G+V L N YA
Sbjct: 629 SALPFTP-DHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAG 687
Query: 583 EEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEI 632
+ D ++RK M K VKK G S + V G+ ++F G++S + ++
Sbjct: 688 LGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKSASEAAQM 737
Score = 212 bits (539), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 153/499 (30%), Positives = 254/499 (50%), Gaps = 41/499 (8%)
Query: 59 NVEITILGR--RGKLKEARKLFDEMPQRDAVS----YNSMIAVYLKNKDVHGAETIFKAM 112
N E IL R G L AR L D++PQR +++ + S+++ Y K + A +F+ M
Sbjct: 44 NEEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVM 103
Query: 113 SERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFD 172
ER++V +AM+ GY K R++ A +F M +N SWT +++ GR+E+A++LFD
Sbjct: 104 PERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFD 162
Query: 173 QMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKL 232
+M ER+VV+W T+V+G +NG ++ A++ FD MP ++ ++W AM+K Y++N E L
Sbjct: 163 EMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLL 222
Query: 233 FLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVAR 292
F +M E+NV +W M+ G V EA LF MP+RN VSWTAM+SG A N++ A
Sbjct: 223 FGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREAL 282
Query: 293 KYFDIMPFKDMAAWSA-----MITAY------VDEKLLGEALELFNL-----VPEKNVGI 336
F M KD+ A S + AY V+ + LGE L + + + +
Sbjct: 283 MLFLEMK-KDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRL 341
Query: 337 WNTIIDGYVRNGEAGEALRLFILMLRSCF--RPCVTTMTSIITSCD-GMVEIMQAHAMVI 393
+++ Y +G A L L F + C + + + D E + +
Sbjct: 342 AKSLVHMYASSGLIASAQSL----LNESFDLQSCNIIINRYLKNGDLERAETLFERVKSL 397
Query: 394 HLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQ 453
H ++ +W + +I Y ++GD+ A +F+ L KD V+WT MI + A
Sbjct: 398 H---DKVSWTS--MIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAAS 452
Query: 454 VFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRR---VFDSIKGAYNLNLKVEHYSCLV 510
+ + MV G KP T+ LLS+ ++QG+ V Y+ +L +++ LV
Sbjct: 453 LLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQN--SLV 510
Query: 511 DMLGRAGLVNEAMDVVSTI 529
M + G + +A ++ + +
Sbjct: 511 SMYAKCGAIEDAYEIFAKM 529
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 187/432 (43%), Gaps = 106/432 (24%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVV 118
N +T L R G +++A+++FD MP RD VS+N+MI Y++N + A+ +F MSE++VV
Sbjct: 173 NTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVV 232
Query: 119 AQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSER- 177
++MV GY + G + A +F M ERN SWT++ISG+ EAL LF +M +
Sbjct: 233 TWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDV 292
Query: 178 ---------------------------------SVVT--WTT----------MVSGFAQN 192
V++ W T +V +A +
Sbjct: 293 DAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASS 352
Query: 193 GLVDHARRF----FDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVR-SWNVM 247
GL+ A+ FDL + ++ YL NG LF + + + SW M
Sbjct: 353 GLIASAQSLLNESFDLQ------SCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSM 406
Query: 248 ISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIM------PFK 301
I G L A V A LF+ + D++ V+WT M+SGL QN++ A M P
Sbjct: 407 IDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLN 466
Query: 302 -----------------------------------DMAAWSAMITAYVDEKLLGEALELF 326
D+ +++++ Y + +A E+F
Sbjct: 467 STYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIF 526
Query: 327 NLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIM 386
+ +K+ WN++I G +G A +AL LF ML S +P T ++++C
Sbjct: 527 AKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSAC------- 579
Query: 387 QAHAMVIHLGFE 398
+H+ +I G E
Sbjct: 580 -SHSGLITRGLE 590
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 193/705 (27%), Positives = 348/705 (49%), Gaps = 96/705 (13%)
Query: 47 ISISHDWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAE 106
I D + N + L RRG++ ARK++DEMP ++ VS N+MI+ ++K DV A
Sbjct: 40 IKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSAR 99
Query: 107 TIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNA------FSWTSLISG--- 157
+F AM +R VV + ++ YA+ D A ++F M ++ ++T+L+ G
Sbjct: 100 DLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCND 159
Query: 158 ----------------------------------YFRCGRTEEALQLFDQMSERSVVTWT 183
Y R + A LF+++ E+ VT+
Sbjct: 160 AVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFN 219
Query: 184 TMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFSEGYK-------- 231
T+++G+ ++GL + F M + + ++ ++K+ + F+ G +
Sbjct: 220 TLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTT 279
Query: 232 ---------------------------LFLEMPERNVRSWNVMISGCLSANRVDEAIHLF 264
LF EMPE + S+NV+IS A++ + ++H F
Sbjct: 280 GFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFF 339
Query: 265 ETMP----DRNHVSWTAMVSGLAQNKMVEVARKYF--DIMPFKD--MAAWSAMITAYVDE 316
M DR + + M+S A +++ R+ ++ D + ++++ Y
Sbjct: 340 REMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKC 399
Query: 317 KLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSII 376
++ EA +F +P++ W +I GYV+ G G L+LF M S R +T +++
Sbjct: 400 EMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVL 459
Query: 377 TSCDGMVEIM---QAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVV 433
+ ++ Q HA +I G +N + + L+ +Y+K G + A+ VFE + ++ V
Sbjct: 460 KASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAV 519
Query: 434 SWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSI 493
SW A+I A+A++G G A+ FA+M+ SG +PD ++ +G+L+ACSH G V QG F ++
Sbjct: 520 SWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAM 579
Query: 494 KGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIK 553
Y + K +HY+C++D+LGR G EA ++ + P E DE + ++L AC++H N
Sbjct: 580 SPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEM-PFEPDEIMWSSVLNACRIHKNQS 638
Query: 554 VANSIGQKLLSLEP-TSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQV 612
+A +KL S+E + YV +SN YAA +W++ V+K M+E+ +KK+ +S ++V
Sbjct: 639 LAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEV 698
Query: 613 KGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPENSLLI 657
K H+F +++HP +EI + + + RE GY P+ S ++
Sbjct: 699 NHKIHVFSSNDQTHPNGDEIVRKINELTAEIERE-GYKPDTSSVV 742
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 142/594 (23%), Positives = 240/594 (40%), Gaps = 73/594 (12%)
Query: 94 AVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTS 153
A +L + V I K + D + +V+ + G++ AR+V+D M +N S +
Sbjct: 27 ATFLDTRRVDA--RIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNT 84
Query: 154 LISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFF----------- 202
+ISG+ + G A LFD M +R+VVTWT ++ +A+N D A + F
Sbjct: 85 MISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTL 144
Query: 203 -------DLMP------EKNTIAW-------------------TAMVKSYLDNGQFSEGY 230
L+P +N + ++KSY + +
Sbjct: 145 PDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLAC 204
Query: 231 KLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSG--------- 281
LF E+PE++ ++N +I+G E+IHLF M H SG
Sbjct: 205 VLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLH 264
Query: 282 ---LAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWN 338
L Q F +D + + ++ Y + E LF+ +PE + +N
Sbjct: 265 DFALGQQLHALSVTTGFS----RDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYN 320
Query: 339 TIIDGYVRNGEAGEALRLFILMLRSCFR----PCVTTMTSIITSCDGMVEIMQAHAMVIH 394
+I Y + + +L F M F P TM SI + + Q H +
Sbjct: 321 VVISSYSQADQYEASLHFFREMQCMGFDRRNFP-FATMLSIAANLSSLQMGRQLHCQALL 379
Query: 395 LGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQV 454
+ V N+L+ +Y+K A L+F+ L + VSWTA+I Y G L++
Sbjct: 380 ATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKL 439
Query: 455 FARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLG 514
F +M S + D+ TF +L A + + G+++ I + NL V S LVDM
Sbjct: 440 FTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE-NVFSGSGLVDMYA 498
Query: 515 RAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLL--SLEPTSSG- 571
+ G + +A+ V +P + + AL+ A +G+ + A K++ L+P S
Sbjct: 499 KCGSIKDAVQVFEEMP--DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSI 556
Query: 572 -GYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGER 624
G + + EQ E+ Q + KK + + G+N F E+
Sbjct: 557 LGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEK 610
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 164/404 (40%), Gaps = 98/404 (24%)
Query: 40 LRNFTASISISHDWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKN 99
L + + S D S+ N + + ++ E R LFDEMP+ D VSYN +I+ Y +
Sbjct: 272 LHALSVTTGFSRDASVG--NQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 100 KDVHGAETIFKAMS--------------------------ERDVVAQS------------ 121
+ F+ M R + Q+
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG 389
Query: 122 -AMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQM------ 174
++VD YAK + A +F ++ +R SWT+LISGY + G L+LF +M
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLR 449
Query: 175 ---------------------------------SERSVVTWTTMVSGFAQNGLVDHARRF 201
+ +V + + +V +A+ G + A +
Sbjct: 450 ADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQV 509
Query: 202 FDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANR----V 257
F+ MP++N ++W A++ ++ DNG F +M E ++ +V I G L+A V
Sbjct: 510 FEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFV 569
Query: 258 DEAIHLFETM-------PDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFK-DMAAWSAM 309
++ F+ M P + H + M+ L +N A K D MPF+ D WS++
Sbjct: 570 EQGTEYFQAMSPIYGITPKKKH--YACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSV 627
Query: 310 ITA---YVDEKLLGEALE-LFNLVPEKNVGIWNTIIDGYVRNGE 349
+ A + ++ L A E LF++ ++ + ++ + Y GE
Sbjct: 628 LNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGE 671
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 305 bits (782), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 198/645 (30%), Positives = 326/645 (50%), Gaps = 62/645 (9%)
Query: 71 LKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQS----AMVDG 126
K+ RK+FDEM +R+ V++ ++I+ Y +N T+F M S A +
Sbjct: 144 FKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGV 203
Query: 127 YAKAG----RLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTW 182
A+ G L V N ++ SLI+ Y +CG +A LFD+ +SVVTW
Sbjct: 204 LAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTW 263
Query: 183 TTMVSGFAQNGL------------VDHAR-------------------RF---------- 201
+M+SG+A NGL +++ R RF
Sbjct: 264 NSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVK 323
Query: 202 FDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMP-ERNVRSWNVMISGCLSANRVDEA 260
+ + ++N TA++ +Y + +LF E+ NV SW MISG L + +EA
Sbjct: 324 YGFLFDQNI--RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEA 381
Query: 261 IHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDE 316
+ LF M + N +++ +++ L EV + + +A++ AYV
Sbjct: 382 VDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKL 441
Query: 317 KLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSII 376
+ EA ++F+ + +K++ W+ ++ GY + GE A+++F + + +P T +SI+
Sbjct: 442 GKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSIL 501
Query: 377 TSCDG----MVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDV 432
C M + Q H I + + V++AL+T+Y+K G++ SA VF+ + KD+
Sbjct: 502 NVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDL 561
Query: 433 VSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDS 492
VSW +MI YA HG AL VF M K D +TF+G+ +AC+HAGLV +G + FD
Sbjct: 562 VSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDI 621
Query: 493 IKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNI 552
+ + EH SC+VD+ RAG + +AM V+ + P+ + +L AC++H
Sbjct: 622 MVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENM-PNPAGSTIWRTILAACRVHKKT 680
Query: 553 KVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQV 612
++ +K+++++P S YVLLSN YA W E A+VRK M E+NVKK G+S I+V
Sbjct: 681 ELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEV 740
Query: 613 KGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPENSLLI 657
K K + F G+RSHP ++IY L+ L +++ GY P+ S ++
Sbjct: 741 KNKTYSFLAGDRSHPLKDQIYMKLED-LSTRLKDLGYEPDTSYVL 784
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 199/438 (45%), Gaps = 43/438 (9%)
Query: 126 GYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMS------ERSV 179
G + RL NA +FD R+ S+ SL+ G+ R GRT+EA +LF + + S+
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 180 VTWTTMVSGFAQNGLVDHARR-------FFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKL 232
+ VS + L F D + T++V +Y+ F +G K+
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLD-----DVSVGTSLVDTYMKGSNFKDGRKV 150
Query: 233 FLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKM- 287
F EM ERNV +W +ISG + DE + LF M + N ++ A + LA+ +
Sbjct: 151 FDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVG 210
Query: 288 -------VEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTI 340
V + D K + +++I Y+ + +A LF+ K+V WN++
Sbjct: 211 GRGLQVHTVVVKNGLD----KTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSM 266
Query: 341 IDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIM---QAHAMVIHLGF 397
I GY NG EAL +F M + R ++ S+I C + E+ Q H V+ GF
Sbjct: 267 ISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGF 326
Query: 398 EQNTWVTNALITLYSKSGDLCSAMLVF-ELLKSKDVVSWTAMIVAYANHGHGHHALQVFA 456
+ + AL+ YSK + A+ +F E+ +VVSWTAMI + + A+ +F+
Sbjct: 327 LFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFS 386
Query: 457 RMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRA 516
M G +P+E T+ +L+A +++ +K Y + V + L+D +
Sbjct: 387 EMKRKGVRPNEFTYSVILTALP---VISPSEVHAQVVKTNYERSSTVG--TALLDAYVKL 441
Query: 517 GLVNEAMDVVSTIPPSEI 534
G V EA V S I +I
Sbjct: 442 GKVEEAAKVFSGIDDKDI 459
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 192/445 (43%), Gaps = 57/445 (12%)
Query: 38 RFLRNFTASISISHDWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYL 97
R L+ T + D ++ N I + + G +++AR LFD+ + V++NSMI+ Y
Sbjct: 212 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 271
Query: 98 KNKDVHGAETIFKAMSERDV-VAQSAMVDGYAKAGRLDNAR--EVFDNMTERNAFSW--- 151
N A +F +M V +++S+ L R E + F +
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN 331
Query: 152 --TSLISGYFRCGRTEEALQLFDQMS-ERSVVTWTTMVSGFAQNGLVDHARRFFDLMP-- 206
T+L+ Y +C +AL+LF ++ +VV+WT M+SGF QN + A F M
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 207 ---------------------------------EKNTIAWTAMVKSYLDNGQFSEGYKLF 233
E+++ TA++ +Y+ G+ E K+F
Sbjct: 392 GVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVF 451
Query: 234 LEMPERNVRSWNVMISGCLSANRVDEAIHLFETMP----DRNHVSWTAMVSGLAQNKMVE 289
+ ++++ +W+ M++G + AI +F + N +++++++ A
Sbjct: 452 SGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASM 511
Query: 290 VARKYFDIMPFK-----DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGY 344
K F K + SA++T Y + + A E+F EK++ WN++I GY
Sbjct: 512 GQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGY 571
Query: 345 VRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCD--GMVEIMQAH--AMVIHLGFEQN 400
++G+A +AL +F M + + T + +C G+VE + + MV
Sbjct: 572 AQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPT 631
Query: 401 TWVTNALITLYSKSGDLCSAMLVFE 425
+ ++ LYS++G L AM V E
Sbjct: 632 KEHNSCMVDLYSRAGQLEKAMKVIE 656
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 103/233 (44%), Gaps = 50/233 (21%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIF------------------- 109
GK++EA K+F + +D V++++M+A Y + + A +F
Sbjct: 442 GKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSIL 501
Query: 110 ---------------------KAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNA 148
K+ + + SA++ YAK G +++A EVF E++
Sbjct: 502 NVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDL 561
Query: 149 FSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHARRFFDL 204
SW S+ISGY + G+ +AL +F +M +R V VT+ + + GLV+ ++FD+
Sbjct: 562 VSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDI 621
Query: 205 MPEKNTIAWT-----AMVKSYLDNGQFSEGYKLFLEMPERNVRS-WNVMISGC 251
M IA T MV Y GQ + K+ MP + W +++ C
Sbjct: 622 MVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAAC 674
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 52 DWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKA 111
D SL + +T+ ++G ++ A ++F ++D VS+NSMI+ Y ++ A +FK
Sbjct: 527 DSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKE 586
Query: 112 MSERDVVAQSAMVDGY----AKAGRLDNAREVFDNMTERNAFSWTS-----LISGYFRCG 162
M +R V G AG ++ + FD M + T ++ Y R G
Sbjct: 587 MKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAG 646
Query: 163 RTEEALQLFDQMSERSVVT-WTTMVSGFAQNGLVDHAR----RFFDLMPEKNTIAWTAMV 217
+ E+A+++ + M + T W T+++ + + R + + PE ++ A+ +
Sbjct: 647 QLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPE-DSAAYVLLS 705
Query: 218 KSYLDNGQFSEGYKLFLEMPERNVR 242
Y ++G + E K+ M ERNV+
Sbjct: 706 NMYAESGDWQERAKVRKLMNERNVK 730
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 305 bits (780), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 185/616 (30%), Positives = 311/616 (50%), Gaps = 88/616 (14%)
Query: 117 VVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQM-- 174
+V ++ + AK+GR+ +AR+VFD M E + +W ++++ Y R G +EA+ LF Q+
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 175 --SERSVVTWTTMVSGFAQNGLVDHARR-------------------------------- 200
++ ++T ++S A G V R+
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLS 123
Query: 201 ----FFDLMPE-KNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSAN 255
F D+ + +N + W +++ +Y++ QF +F+EMP+R +WN+MISG
Sbjct: 124 ANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCG 183
Query: 256 RVDEAIHLFETM--------------------PDRNHVSWTAMVSGL-----------AQ 284
+++ + LF+ M D ++V + MV + A+
Sbjct: 184 KLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAK 243
Query: 285 NKMVEV---------ARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVG 335
N ++ A + + + +W+++I A + +ALE+F+L PEKN+
Sbjct: 244 NSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIV 303
Query: 336 IWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQA---HAMV 392
W T+I GY RNG+ +ALR F+ M++S +++ +C G+ + H +
Sbjct: 304 TWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCL 363
Query: 393 IHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHAL 452
IH GF+ +V NAL+ LY+K GD+ A F + +KD+VSW M+ A+ HG AL
Sbjct: 364 IHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQAL 423
Query: 453 QVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDM 512
+++ M+ SG KPD +TF+GLL+ CSH+GLV +G +F+S+ Y + L+V+H +C++DM
Sbjct: 424 KLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDM 483
Query: 513 LGRAGLVNEAMDVVSTIPPSEIDE---AVLVALLGACKLHGNIKVANSIGQKLLSLEPTS 569
GR G + EA D+ +T D + LLGAC H + ++ + + L EP+
Sbjct: 484 FGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSE 543
Query: 570 SGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQV 629
+VLLSN Y + +W E VR+ M E+ +KK G S I+V + F VG+ SHP++
Sbjct: 544 EMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRL 603
Query: 630 EEIYGFLQQSLQPLMR 645
EE+ L LQ MR
Sbjct: 604 EELSETL-NCLQHEMR 618
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 97/236 (41%), Gaps = 45/236 (19%)
Query: 46 SISISHDWS--LRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVH 103
++ + + WS + +N ++ + G +A + + + VS+NS+I +K +
Sbjct: 229 AVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETE 288
Query: 104 GAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERN---------------- 147
A +F E+++V + M+ GY + G + A F M +
Sbjct: 289 KALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACS 348
Query: 148 -----------------------AFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTT 184
A+ +L++ Y +CG +EA + F ++ + +V+W T
Sbjct: 349 GLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNT 408
Query: 185 MVSGFAQNGLVDHARRFFDLM----PEKNTIAWTAMVKSYLDNGQFSEGYKLFLEM 236
M+ F +GL D A + +D M + + + + ++ + +G EG +F M
Sbjct: 409 MLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESM 464
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 303 bits (777), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 202/691 (29%), Positives = 344/691 (49%), Gaps = 80/691 (11%)
Query: 39 FLRNFTASISISHDWSLRKRNVEITILGRR----------------GKLKEARKLFDEMP 82
+L F S SISH L + + +I + G R G + AR +F +
Sbjct: 23 YLDFFKRSTSISH---LAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQ 79
Query: 83 QRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYA----------KAGR 132
+ D +N ++ + N+ H + ++F + + + ++ +A +AGR
Sbjct: 80 RPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGR 139
Query: 133 LDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQN 192
+ + + V D + ++++ YF+ R E+A ++FD+M E+ + W TM+SG+ +N
Sbjct: 140 VIHGQAVVDG-CDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKN 198
Query: 193 GL-VDHARRFFDLMPEKNT---------------------------------------IA 212
+ V+ + F DL+ E T
Sbjct: 199 EMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYV 258
Query: 213 WTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLF-ETMPDRN 271
T + Y G+ G LF E + ++ ++N MI G S + ++ LF E M
Sbjct: 259 LTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGA 318
Query: 272 HVSWTAMVSGLAQNK---MVEVARKYFDIMPFKDMAAWS-AMITAYVDEKLLGEALELFN 327
+ + +VS + + ++ Y F A+ S A+ T Y + A +LF+
Sbjct: 319 RLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFD 378
Query: 328 LVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCD--GMVEI 385
PEK++ WN +I GY +NG +A+ LF M +S F P T+T I+++C G + +
Sbjct: 379 ESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSL 438
Query: 386 MQ-AHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYAN 444
+ H +V FE + +V+ ALI +Y+K G + A +F+L+ K+ V+W MI Y
Sbjct: 439 GKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGL 498
Query: 445 HGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVE 504
HG G AL +F M+ SG P +TF+ +L ACSHAGLV +G +F+S+ Y V+
Sbjct: 499 HGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVK 558
Query: 505 HYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLS 564
HY+C+VD+LGRAG + A+ + + E +V LLGAC++H + +A ++ +KL
Sbjct: 559 HYACMVDILGRAGHLQRALQFIEAMSI-EPGSSVWETLLGACRIHKDTNLARTVSEKLFE 617
Query: 565 LEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGER 624
L+P + G +VLLSN ++A+ + + A VR+ K++ + K G++ I++ H+F G++
Sbjct: 618 LDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQ 677
Query: 625 SHPQVEEIYGFLQQSLQPLMRETGYTPENSL 655
SHPQV+EIY L++ L+ MRE GY PE L
Sbjct: 678 SHPQVKEIYEKLEK-LEGKMREAGYQPETEL 707
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 194/656 (29%), Positives = 326/656 (49%), Gaps = 64/656 (9%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQ- 120
+++ R G + EA ++F+ + + V Y++M+ + K D+ A F M DV
Sbjct: 76 VSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVV 135
Query: 121 ---SAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQLFDQ 173
+ ++ L +E+ + + + F+ T L + Y +C + EA ++FD+
Sbjct: 136 YNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDR 195
Query: 174 MSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKN------TIAW-------------- 213
M ER +V+W T+V+G++QNG+ A M E+N TI
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVG 255
Query: 214 -------------------TAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSA 254
TA+V Y G +LF M ERNV SWN MI +
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQN 315
Query: 255 NRVDEAIHLFETMPDRNHVSWTAMVSGL--AQNKMVEVARKYF------DIMPFKDMAAW 306
EA+ +F+ M D V G A + ++ R F ++ ++++
Sbjct: 316 ENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVV 375
Query: 307 SAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFR 366
+++I+ Y K + A +F + + + WN +I G+ +NG +AL F M +
Sbjct: 376 NSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVK 435
Query: 367 PCVTTMTSIITSCDGMVEIMQA---HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLV 423
P T S+IT+ + A H +V+ ++N +VT AL+ +Y+K G + A L+
Sbjct: 436 PDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLI 495
Query: 424 FELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLV 483
F+++ + V +W AMI Y HG G AL++F M KP+ +TF+ ++SACSH+GLV
Sbjct: 496 FDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLV 555
Query: 484 NQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLV--A 541
G + F +K Y++ L ++HY +VD+LGRAG +NEA D + +P + AV V A
Sbjct: 556 EAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMP---VKPAVNVYGA 612
Query: 542 LLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNV 601
+LGAC++H N+ A ++L L P G +VLL+N Y A W++ QVR M + +
Sbjct: 613 MLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGL 672
Query: 602 KKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPENSLLI 657
+K G S +++K + H FF G +HP ++IY FL++ L ++E GY P+ +L++
Sbjct: 673 RKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEK-LICHIKEAGYVPDTNLVL 727
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 206/432 (47%), Gaps = 53/432 (12%)
Query: 139 VFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHA 198
VF N + F T L+S + R G +EA ++F+ + + V + TM+ GFA+ +D A
Sbjct: 60 VFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKA 119
Query: 199 RRFF------DLMP---------------------------------EKNTIAWTAMVKS 219
+FF D+ P + A T +
Sbjct: 120 LQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENM 179
Query: 220 YLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRN----HVSW 275
Y Q +E K+F MPER++ SWN +++G A+ + ++M + N ++
Sbjct: 180 YAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITI 239
Query: 276 TAMVSGLAQNKMVEVARK---YFDIMPFKDMAAWS-AMITAYVDEKLLGEALELFNLVPE 331
+++ ++ +++ V ++ Y F + S A++ Y L A +LF+ + E
Sbjct: 240 VSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLE 299
Query: 332 KNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQA--- 388
+NV WN++ID YV+N EA+ +F ML +P ++ + +C + ++ +
Sbjct: 300 RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI 359
Query: 389 HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHG 448
H + + LG ++N V N+LI++Y K ++ +A +F L+S+ +VSW AMI+ +A +G
Sbjct: 360 HKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRP 419
Query: 449 HHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSI-KGAYNLNLKVEHYS 507
AL F++M + KPD T+V +++A + + + + + + + + N+ V +
Sbjct: 420 IDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVT--T 477
Query: 508 CLVDMLGRAGLV 519
LVDM + G +
Sbjct: 478 ALVDMYAKCGAI 489
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 193/477 (40%), Gaps = 110/477 (23%)
Query: 9 AFVLKTLVMKMGVCYHHRRRVFSQCQPIFRFLRNFTASISISHDWSLRKRNVE------- 61
A V + + K+ V YH + F++ + + L+ F +R +VE
Sbjct: 89 ARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFV---------RMRYDDVEPVVYNFT 139
Query: 62 --ITILGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSER 115
+ + G +L+ +++ + + D + + +Y K + V+ A +F M ER
Sbjct: 140 YLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER 199
Query: 116 DVVAQSAMVDGYAKAGRLDNAREVFDNMTERN-------------AFSW----------- 151
D+V+ + +V GY++ G A E+ +M E N A S
Sbjct: 200 DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIH 259
Query: 152 ---------------TSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVD 196
T+L+ Y +CG E A QLFD M ER+VV+W +M+ + QN
Sbjct: 260 GYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPK 319
Query: 197 HARRFFDLMPEKNT----IAWTAMVKSYLDNGQFSEG---YKLFLEMP-ERNVRSWNVMI 248
A F M ++ ++ + + D G G +KL +E+ +RNV N +I
Sbjct: 320 EAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLI 379
Query: 249 SGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDM----- 303
S VD A +F + R VSW AM+ G AQN A YF M + +
Sbjct: 380 SMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTF 439
Query: 304 -----------------AAW-----------------SAMITAYVDEKLLGEALELFNLV 329
A W +A++ Y + A +F+++
Sbjct: 440 TYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMM 499
Query: 330 PEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC--DGMVE 384
E++V WN +IDGY +G AL LF M + +P T S+I++C G+VE
Sbjct: 500 SERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVE 556
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 3/161 (1%)
Query: 375 IITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVS 434
++ C + E+ Q +V G Q + L++L+ + G + A VFE + SK V
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 102
Query: 435 WTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFD-SI 493
+ M+ +A ALQ F RM +P F LL C + G+ + +
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV 162
Query: 494 KGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEI 534
K ++L+L + L +M + VNEA V +P ++
Sbjct: 163 KSGFSLDLFA--MTGLENMYAKCRQVNEARKVFDRMPERDL 201
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 195/612 (31%), Positives = 320/612 (52%), Gaps = 61/612 (9%)
Query: 102 VHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRC 161
+HG I K +D+ Q+++V YA+ G LD+AR+VFD M+ERN SWTS+I GY R
Sbjct: 156 IHG--LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 162 GRTEEALQLF-----DQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMP----EKNTIA 212
++A+ LF D+ + VT ++S A+ ++ + + + E N +
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLM 273
Query: 213 WTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM----- 267
+A+V Y+ +LF E N+ N M S + EA+ +F M
Sbjct: 274 VSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV 333
Query: 268 -PDRNHVSWTAMVSGLAQ--------------------------NKMVEV---------A 291
PDR +S + +S +Q N ++++ A
Sbjct: 334 RPDR--ISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 391
Query: 292 RKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAG 351
+ FD M K + W++++ YV+ + A E F +PEKN+ WNTII G V+
Sbjct: 392 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 451
Query: 352 EALRLFILML-RSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHL---GFEQNTWVTNAL 407
EA+ +F M + TM SI ++C + + A + ++ G + + + L
Sbjct: 452 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 511
Query: 408 ITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDE 467
+ ++S+ GD SAM +F L ++DV +WTA I A A G+ A+++F M+ G KPD
Sbjct: 512 VDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 571
Query: 468 ITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVS 527
+ FVG L+ACSH GLV QG+ +F S+ + ++ + HY C+VD+LGRAGL+ EA+ ++
Sbjct: 572 VAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 631
Query: 528 TIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWD 587
+ P E ++ + +LL AC++ GN+++A +K+ L P +G YVLLSN YA+ +W+
Sbjct: 632 DM-PMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWN 690
Query: 588 EFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRET 647
+ A+VR MKEK ++K G S IQ++GK H F G+ SHP++ I L + Q
Sbjct: 691 DMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQR-ASHL 749
Query: 648 GYTPE-NSLLID 658
G+ P+ +++L+D
Sbjct: 750 GHVPDLSNVLMD 761
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 199/455 (43%), Gaps = 60/455 (13%)
Query: 136 AREVFDNM-TERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFA 190
A+EVF+N + F + SLI GY G EA+ LF +M + T+ +S A
Sbjct: 86 AKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACA 145
Query: 191 Q-----NGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWN 245
+ NG+ H + K+ ++V Y + G+ K+F EM ERNV SW
Sbjct: 146 KSRAKGNGIQIHG-LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWT 204
Query: 246 VMISGCLSANRVDEAIHLF-------ETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIM 298
MI G + +A+ LF E P N V+ ++S A+ + +E K + +
Sbjct: 205 SMICGYARRDFAKDAVDLFFRMVRDEEVTP--NSVTMVCVISACAKLEDLETGEKVYAFI 262
Query: 299 PFKDMAAWSAMITAYVDEKLLGEALE----LFNLVPEKNVGIWNTIIDGYVRNGEAGEAL 354
+ M++A VD + A++ LF+ N+ + N + YVR G EAL
Sbjct: 263 RNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREAL 322
Query: 355 RLFILMLRSCFRPCVTTMTSIITSCDGMVEIM---QAHAMVIHLGFEQNTWVTNALITLY 411
+F LM+ S RP +M S I+SC + I+ H V+ GFE + NALI +Y
Sbjct: 323 GVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMY 382
Query: 412 SKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHG----------------------- 448
K +A +F+ + +K VV+W +++ Y +G
Sbjct: 383 MKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIIS 442
Query: 449 --------HHALQVFARMVTS-GTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNL 499
A++VF M + G D +T + + SAC H G ++ + ++ I+ +
Sbjct: 443 GLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIE-KNGI 501
Query: 500 NLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEI 534
L V + LVDM R G AM + +++ ++
Sbjct: 502 QLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDV 536
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 117/503 (23%), Positives = 192/503 (38%), Gaps = 118/503 (23%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQ-------- 120
G+L ARK+FDEM +R+ VS+ SMI Y + A +F M + V
Sbjct: 183 GELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCV 242
Query: 121 --------------------------------SAMVDGYAKAGRLDNAREVFDNMTERNA 148
SA+VD Y K +D A+ +FD N
Sbjct: 243 ISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNL 302
Query: 149 FSWTSLISGYFRCGRTEEALQLFDQMSERSV-------------------VTWTTMVSGF 189
++ S Y R G T EAL +F+ M + V + W G+
Sbjct: 303 DLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGY 362
Query: 190 A-QNGL-------------------VDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEG 229
+NG D A R FD M K + W ++V Y++NG+
Sbjct: 363 VLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAA 422
Query: 230 YKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDR-----NHVSWTAMVSGLAQ 284
++ F MPE+N+ SWN +ISG + + +EAI +F +M + + V+ ++ S
Sbjct: 423 WETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGH 482
Query: 285 NKMVEVARKYFDIMPFKDMAAWSAMITAYVDE-KLLGE---ALELFNLVPEKNVGIWNTI 340
+++A+ + + + + T VD G+ A+ +FN + ++V W
Sbjct: 483 LGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAA 542
Query: 341 IDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQN 400
I G A A+ LF M+ +P +T+C +H ++ G E
Sbjct: 543 IGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTAC--------SHGGLVQQGKE-- 592
Query: 401 TWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVT 460
YS ML + +D V + M+ G A+Q+ M
Sbjct: 593 --------IFYS--------MLKLHGVSPED-VHYGCMVDLLGRAGLLEEAVQLIEDM-- 633
Query: 461 SGTKPDEITFVGLLSACSHAGLV 483
+P+++ + LL+AC G V
Sbjct: 634 -PMEPNDVIWNSLLAACRVQGNV 655
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 107/204 (52%), Gaps = 5/204 (2%)
Query: 336 IWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC---DGMVEIMQAHAMV 392
++N++I GY +G EA+ LF+ M+ S P T +++C +Q H ++
Sbjct: 101 MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 393 IHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHAL 452
+ +G+ ++ +V N+L+ Y++ G+L SA VF+ + ++VVSWT+MI YA A+
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 453 QVFARMV-TSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVD 511
+F RMV P+ +T V ++SAC+ + G +V+ I+ + + + S LVD
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS-GIEVNDLMVSALVD 279
Query: 512 MLGRAGLVNEAMDVVSTIPPSEID 535
M + ++ A + S +D
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLD 303
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 114/243 (46%), Gaps = 21/243 (8%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSER-----DVVAQSAM 123
G++ A + F+ MP+++ VS+N++I+ ++ A +F +M + D V ++
Sbjct: 417 GEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSI 476
Query: 124 VDGYAKAGRLDNAREVFDNMTERNAFSW-----TSLISGYFRCGRTEEALQLFDQMSERS 178
G LD A+ ++ E+N T+L+ + RCG E A+ +F+ ++ R
Sbjct: 477 ASACGHLGALDLAKWIY-YYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRD 535
Query: 179 VVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFSEGYKLFL 234
V WT + A G + A FD M E+ + +A+ + + G +G ++F
Sbjct: 536 VSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFY 595
Query: 235 EMPERNVRSWNVMISGCL-----SANRVDEAIHLFETMP-DRNHVSWTAMVSGLAQNKMV 288
M + + S + GC+ A ++EA+ L E MP + N V W ++++ V
Sbjct: 596 SMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNV 655
Query: 289 EVA 291
E+A
Sbjct: 656 EMA 658
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 195/612 (31%), Positives = 320/612 (52%), Gaps = 61/612 (9%)
Query: 102 VHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRC 161
+HG I K +D+ Q+++V YA+ G LD+AR+VFD M+ERN SWTS+I GY R
Sbjct: 156 IHG--LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 162 GRTEEALQLF-----DQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMP----EKNTIA 212
++A+ LF D+ + VT ++S A+ ++ + + + E N +
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLM 273
Query: 213 WTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM----- 267
+A+V Y+ +LF E N+ N M S + EA+ +F M
Sbjct: 274 VSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV 333
Query: 268 -PDRNHVSWTAMVSGLAQ--------------------------NKMVEV---------A 291
PDR +S + +S +Q N ++++ A
Sbjct: 334 RPDR--ISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 391
Query: 292 RKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAG 351
+ FD M K + W++++ YV+ + A E F +PEKN+ WNTII G V+
Sbjct: 392 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 451
Query: 352 EALRLFILML-RSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHL---GFEQNTWVTNAL 407
EA+ +F M + TM SI ++C + + A + ++ G + + + L
Sbjct: 452 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 511
Query: 408 ITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDE 467
+ ++S+ GD SAM +F L ++DV +WTA I A A G+ A+++F M+ G KPD
Sbjct: 512 VDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 571
Query: 468 ITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVS 527
+ FVG L+ACSH GLV QG+ +F S+ + ++ + HY C+VD+LGRAGL+ EA+ ++
Sbjct: 572 VAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 631
Query: 528 TIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWD 587
+ P E ++ + +LL AC++ GN+++A +K+ L P +G YVLLSN YA+ +W+
Sbjct: 632 DM-PMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWN 690
Query: 588 EFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRET 647
+ A+VR MKEK ++K G S IQ++GK H F G+ SHP++ I L + Q
Sbjct: 691 DMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQR-ASHL 749
Query: 648 GYTPE-NSLLID 658
G+ P+ +++L+D
Sbjct: 750 GHVPDLSNVLMD 761
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 199/455 (43%), Gaps = 60/455 (13%)
Query: 136 AREVFDNM-TERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFA 190
A+EVF+N + F + SLI GY G EA+ LF +M + T+ +S A
Sbjct: 86 AKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACA 145
Query: 191 Q-----NGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWN 245
+ NG+ H + K+ ++V Y + G+ K+F EM ERNV SW
Sbjct: 146 KSRAKGNGIQIHG-LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWT 204
Query: 246 VMISGCLSANRVDEAIHLF-------ETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIM 298
MI G + +A+ LF E P N V+ ++S A+ + +E K + +
Sbjct: 205 SMICGYARRDFAKDAVDLFFRMVRDEEVTP--NSVTMVCVISACAKLEDLETGEKVYAFI 262
Query: 299 PFKDMAAWSAMITAYVDEKLLGEALE----LFNLVPEKNVGIWNTIIDGYVRNGEAGEAL 354
+ M++A VD + A++ LF+ N+ + N + YVR G EAL
Sbjct: 263 RNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREAL 322
Query: 355 RLFILMLRSCFRPCVTTMTSIITSCDGMVEIM---QAHAMVIHLGFEQNTWVTNALITLY 411
+F LM+ S RP +M S I+SC + I+ H V+ GFE + NALI +Y
Sbjct: 323 GVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMY 382
Query: 412 SKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHG----------------------- 448
K +A +F+ + +K VV+W +++ Y +G
Sbjct: 383 MKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIIS 442
Query: 449 --------HHALQVFARMVTS-GTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNL 499
A++VF M + G D +T + + SAC H G ++ + ++ I+ +
Sbjct: 443 GLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIE-KNGI 501
Query: 500 NLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEI 534
L V + LVDM R G AM + +++ ++
Sbjct: 502 QLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDV 536
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 118/514 (22%), Positives = 195/514 (37%), Gaps = 118/514 (22%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQ-------- 120
G+L ARK+FDEM +R+ VS+ SMI Y + A +F M + V
Sbjct: 183 GELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCV 242
Query: 121 --------------------------------SAMVDGYAKAGRLDNAREVFDNMTERNA 148
SA+VD Y K +D A+ +FD N
Sbjct: 243 ISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNL 302
Query: 149 FSWTSLISGYFRCGRTEEALQLFDQMSERSV-------------------VTWTTMVSGF 189
++ S Y R G T EAL +F+ M + V + W G+
Sbjct: 303 DLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGY 362
Query: 190 A-QNGL-------------------VDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEG 229
+NG D A R FD M K + W ++V Y++NG+
Sbjct: 363 VLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAA 422
Query: 230 YKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDR-----NHVSWTAMVSGLAQ 284
++ F MPE+N+ SWN +ISG + + +EAI +F +M + + V+ ++ S
Sbjct: 423 WETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGH 482
Query: 285 NKMVEVARKYFDIMPFKDMAAWSAMITAYVDE-KLLGE---ALELFNLVPEKNVGIWNTI 340
+++A+ + + + + T VD G+ A+ +FN + ++V W
Sbjct: 483 LGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAA 542
Query: 341 IDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQN 400
I G A A+ LF M+ +P +T+C +H ++ G E
Sbjct: 543 IGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTAC--------SHGGLVQQGKE-- 592
Query: 401 TWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVT 460
YS ML + +D V + M+ G A+Q+ M
Sbjct: 593 --------IFYS--------MLKLHGVSPED-VHYGCMVDLLGRAGLLEEAVQLIEDM-- 633
Query: 461 SGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIK 494
+P+++ + LL+AC G V + I+
Sbjct: 634 -PMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQ 666
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 107/204 (52%), Gaps = 5/204 (2%)
Query: 336 IWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC---DGMVEIMQAHAMV 392
++N++I GY +G EA+ LF+ M+ S P T +++C +Q H ++
Sbjct: 101 MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 393 IHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHAL 452
+ +G+ ++ +V N+L+ Y++ G+L SA VF+ + ++VVSWT+MI YA A+
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 453 QVFARMV-TSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVD 511
+F RMV P+ +T V ++SAC+ + G +V+ I+ + + + S LVD
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS-GIEVNDLMVSALVD 279
Query: 512 MLGRAGLVNEAMDVVSTIPPSEID 535
M + ++ A + S +D
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLD 303
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 192/638 (30%), Positives = 317/638 (49%), Gaps = 83/638 (13%)
Query: 73 EARKLFDEMPQRDAVSYNSMIAVYLKNK-------------------DVHGAETIFKAMS 113
+AR++F EM +R +N+++ + K D KA
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 114 ERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQ 173
E V M+ G+ K D + + +SLI Y +CGR EAL++FD+
Sbjct: 72 ELREVNYGEMIHGFVKK----------DVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDE 121
Query: 174 MSERSVVTWTTMVSGFAQNGLVDHARRFF-------DLMPEKNTI-----AWT------- 214
+ + +VTW++MVSGF +NG A FF D+ P++ T+ A T
Sbjct: 122 LEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRL 181
Query: 215 ---------------------AMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLS 253
+++ Y + F E LF + E++V SW+ +I+ +
Sbjct: 182 GRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQ 241
Query: 254 ANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAM 309
EA+ +F M D N + ++ A +E RK ++ K + +
Sbjct: 242 NGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKV 301
Query: 310 ITAYVDEKLLG----EALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLF-ILMLRSC 364
TA VD + EA +F+ +P K+V W +I G+ NG A ++ F I++L +
Sbjct: 302 STALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENN 361
Query: 365 FRPCVTTMTSIITSCDGMVEIMQA---HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAM 421
RP M ++ SC + + QA H+ VI GF+ N ++ +L+ LYS+ G L +A
Sbjct: 362 TRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNAS 421
Query: 422 LVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMV-TSGTKPDEITFVGLLSACSHA 480
VF + KD V WT++I Y HG G AL+ F MV +S KP+E+TF+ +LSACSHA
Sbjct: 422 KVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHA 481
Query: 481 GLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLV 540
GL+++G R+F + Y L +EHY+ LVD+LGR G ++ A+++ +P S + +L
Sbjct: 482 GLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQ-ILG 540
Query: 541 ALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKN 600
LLGAC++H N ++A ++ +KL LE +G Y+L+SN Y + +W+ ++R +K++
Sbjct: 541 TLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRG 600
Query: 601 VKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQ 638
+KK S I+++ K H F + HP+ E +YG L++
Sbjct: 601 IKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKE 638
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 212/692 (30%), Positives = 336/692 (48%), Gaps = 94/692 (13%)
Query: 14 TLVMKMGVCYHHRRRVFSQCQPIFRFLRNFTASISISHDWSLRKRNVEITILGRRGKLKE 73
TL+ K+ +H ++R + + + AS I H NV + + GKL +
Sbjct: 16 TLLKKL--THHSQQRNLVAGRAVHGQIIRTGASTCIQH------ANVLVNFYAKCGKLAK 67
Query: 74 ARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRL 133
A +F+ + +D VS+NS+I Y +N + + T+ + R++ AQ + + Y AG
Sbjct: 68 AHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLF--REMRAQDILPNAYTLAGIF 125
Query: 134 DNAREVFDNMTERNAFSW-------------TSLISGYFRCGRTEEALQLFDQMSERSVV 180
+ + R A + TSL+ Y + G E+ L++F M ER+
Sbjct: 126 KAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTY 185
Query: 181 TWTTMVSGFAQNGLVDHARRFFDL-MPEK-----NTIAWTAMVKS-----YLDNGQ---- 225
TW+TMVSG+A G V+ A + F+L + EK + +TA++ S Y+ G+
Sbjct: 186 TWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHC 245
Query: 226 --FSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLA 283
G F+ + V M S C S N EA +F++ DRN ++W+AMV+G +
Sbjct: 246 ITIKNGLLGFVALSNALV----TMYSKCESLN---EACKMFDSSGDRNSITWSAMVTGYS 298
Query: 284 QNKMVEVARKYF-----------------------DIMPFKD----------------MA 304
QN A K F DI ++ +
Sbjct: 299 QNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLF 358
Query: 305 AWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSC 364
A +A++ Y L +A + F+ + E++V +W ++I GYV+N + EAL L+ M +
Sbjct: 359 ATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAG 418
Query: 365 FRPCVTTMTSIITSCDGMVEI---MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAM 421
P TM S++ +C + + Q H I GF + +AL T+YSK G L
Sbjct: 419 IIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGN 478
Query: 422 LVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAG 481
LVF +KDVVSW AMI +++G G AL++F M+ G +PD++TFV ++SACSH G
Sbjct: 479 LVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKG 538
Query: 482 LVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLV- 540
V +G F+ + L+ KV+HY+C+VD+L RAG + EA + I + ID + +
Sbjct: 539 FVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEF---IESANIDHGLCLW 595
Query: 541 -ALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEK 599
LL ACK HG ++ G+KL++L S YV LS Y A + + +V K M+
Sbjct: 596 RILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRAN 655
Query: 600 NVKKISGFSQIQVKGKNHLFFVGERSHPQVEE 631
V K G S I++K + H+F VG+ HP +EE
Sbjct: 656 GVSKEVGCSWIELKNQYHVFVVGDTMHPMIEE 687
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 190/661 (28%), Positives = 330/661 (49%), Gaps = 79/661 (11%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVY---------------LKNK--- 100
N + + R G L AR++FDEMP RD VS+NS+I+ Y LKN
Sbjct: 145 NALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIV 204
Query: 101 -DVHGAETIFKAMSERDVVAQSAMVDGYA--------------------KAGRLDNAREV 139
D ++ A VV Q + G+A K R +AR V
Sbjct: 205 PDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRV 264
Query: 140 FDNMTERNAFSWTSLISGYFRCGRTEEALQLF----DQMSERSVVTWTTMVSGFAQNGLV 195
FD M R++ S+ ++I GY + EE++++F DQ + ++T ++++ +
Sbjct: 265 FDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQF-KPDLLTVSSVLRACGHLRDL 323
Query: 196 DHARRFFDLMPEKNTIAWTA----MVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGC 251
A+ ++ M + + + ++ Y G +F M ++ SWN +ISG
Sbjct: 324 SLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGY 383
Query: 252 LSANRVDEAIHLFETM----PDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFK------ 301
+ + + EA+ LF+ M +H+++ ++S V+ + D+ K
Sbjct: 384 IQSGDLMEAMKLFKMMMIMEEQADHITYLMLIS---------VSTRLADLKFGKGLHSNG 434
Query: 302 -------DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEAL 354
D++ +A+I Y +G++L++F+ + + WNT+I VR G+ L
Sbjct: 435 IKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGL 494
Query: 355 RLFILMLRSCFRPCVTTMTSIITSCDGMVEI---MQAHAMVIHLGFEQNTWVTNALITLY 411
++ M +S P + T + C + + H ++ G+E + NALI +Y
Sbjct: 495 QVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMY 554
Query: 412 SKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFV 471
SK G L ++ VFE + +DVV+WT MI AY +G G AL+ FA M SG PD + F+
Sbjct: 555 SKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFI 614
Query: 472 GLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPP 531
++ ACSH+GLV++G F+ +K Y ++ +EHY+C+VD+L R+ +++A + + +P
Sbjct: 615 AIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPI 674
Query: 532 SEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQ 591
D ++ ++L AC+ G+++ A + ++++ L P G +L SNAYAA +WD+ +
Sbjct: 675 KP-DASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSL 733
Query: 592 VRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTP 651
+RK +K+K++ K G+S I+V H+F G+ S PQ E IY L+ L LM + GY P
Sbjct: 734 IRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEI-LYSLMAKEGYIP 792
Query: 652 E 652
+
Sbjct: 793 D 793
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 204/441 (46%), Gaps = 25/441 (5%)
Query: 106 ETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTE 165
E I E D+ +A+VD Y++ G L AR+VFD M R+ SW SLISGY G E
Sbjct: 130 EQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYE 189
Query: 166 EALQLFDQMSERSVV----TWTTMVSGFAQNGLVDHARRF----FDLMPEKNTIAWTAMV 217
EAL+++ ++ +V T ++++ F +V + + +V
Sbjct: 190 EALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLV 249
Query: 218 KSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLF-----ETMPDRNH 272
YL + ++ ++F EM R+ S+N MI G L V+E++ +F + PD
Sbjct: 250 AMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLT 309
Query: 273 VSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSA----MITAYVDEKLLGEALELFNL 328
VS G ++ + +A+ ++ M S +I Y + A ++FN
Sbjct: 310 VSSVLRACGHLRD--LSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNS 367
Query: 329 VPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQA 388
+ K+ WN+II GY+++G+ EA++LF +M+ + T +I+ + ++
Sbjct: 368 MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG 427
Query: 389 ---HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANH 445
H+ I G + V+NALI +Y+K G++ ++ +F + + D V+W +I A
Sbjct: 428 KGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRF 487
Query: 446 GHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDS-IKGAYNLNLKVE 504
G LQV +M S PD TF+ L C+ G+ + ++ Y L++
Sbjct: 488 GDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIG 547
Query: 505 HYSCLVDMLGRAGLVNEAMDV 525
+ L++M + G + + V
Sbjct: 548 N--ALIEMYSKCGCLENSSRV 566
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 215/455 (47%), Gaps = 36/455 (7%)
Query: 123 MVDGYAKAGRLDNAREVFDNMTE-RNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV-- 179
++D Y+ ++ VF ++ +N + W S+I + + G EAL+ + ++ E V
Sbjct: 45 LIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSP 104
Query: 180 --VTWTTMVSGFAQNGLVDHA------RRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYK 231
T+ +++ A GL D + D+ E + A+V Y G + +
Sbjct: 105 DKYTFPSVIKACA--GLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQ 162
Query: 232 LFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM------PDRNHVSWTAMVSGLAQN 285
+F EMP R++ SWN +ISG S +EA+ ++ + PD VS G N
Sbjct: 163 VFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFG---N 219
Query: 286 KMVEVARKYFDIMPFK-----DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTI 340
+V + K + + ++ Y+ + +A +F+ + ++ +NT+
Sbjct: 220 LLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTM 279
Query: 341 IDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQA---HAMVIHLGF 397
I GY++ E++R+F+ L F+P + T++S++ +C + ++ A + ++ GF
Sbjct: 280 ICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGF 338
Query: 398 EQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFAR 457
+ V N LI +Y+K GD+ +A VF ++ KD VSW ++I Y G A+++F
Sbjct: 339 VLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKM 398
Query: 458 MVTSGTKPDEITFVGLLSACSHAGLVNQGRRVF-DSIKGAYNLNLKVEHYSCLVDMLGRA 516
M+ + D IT++ L+S + + G+ + + IK ++L V + L+DM +
Sbjct: 399 MMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSN--ALIDMYAKC 456
Query: 517 GLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGN 551
G V +++ + S++ D ++ AC G+
Sbjct: 457 GEVGDSLKIFSSMGTG--DTVTWNTVISACVRFGD 489
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 142/343 (41%), Gaps = 88/343 (25%)
Query: 58 RNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAM----- 112
RN+ I + + G + AR +F+ M +D VS+NS+I+ Y+++ D+ A +FK M
Sbjct: 345 RNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE 404
Query: 113 -------------SER---------------------DVVAQSAMVDGYAKAGRLDNARE 138
S R D+ +A++D YAK G + ++ +
Sbjct: 405 QADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLK 464
Query: 139 VFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVT----------------- 181
+F +M + +W ++IS R G LQ+ QM + VV
Sbjct: 465 IFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAA 524
Query: 182 ----------------------WTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKS 219
++ +++ G ++++ R F+ M ++ + WT M+ +
Sbjct: 525 KRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYA 584
Query: 220 YLDNGQFSEGYKLFLEMPERNVRSWNV----MISGCLSANRVDEAIHLFETMPDRNHVS- 274
Y G+ + + F +M + + +V +I C + VDE + FE M +
Sbjct: 585 YGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDP 644
Query: 275 ----WTAMVSGLAQNKMVEVARKYFDIMPFK-DMAAWSAMITA 312
+ +V L++++ + A ++ MP K D + W++++ A
Sbjct: 645 MIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRA 687
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 81/157 (51%), Gaps = 4/157 (2%)
Query: 376 ITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLK-SKDVVS 434
++S + E+ + HA+VI LG + + + + LI YS + S++ VF + +K+V
Sbjct: 14 LSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYL 73
Query: 435 WTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSI- 493
W ++I A++ +G AL+ + ++ S PD+ TF ++ AC+ G V++ I
Sbjct: 74 WNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL 133
Query: 494 KGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIP 530
+ +L V + LVDM R GL+ A V +P
Sbjct: 134 DMGFESDLFVGN--ALVDMYSRMGLLTRARQVFDEMP 168
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 165/497 (33%), Positives = 272/497 (54%), Gaps = 26/497 (5%)
Query: 179 VVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPE 238
+V W ++ +A+ G + AR+ FD MP ++ +W MV Y + G E KLF EM E
Sbjct: 120 IVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTE 179
Query: 239 RNVRSWNVMISGCLSANRVDEAIHLFETM---PDRNHVSWTAMV--------SGLAQNKM 287
++ SW M++G + ++ +EA+ L+ M P+ +T + + + K
Sbjct: 180 KDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKE 239
Query: 288 VE--VARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYV 345
+ + R D D WS+++ Y + EA +F+ + EK+V W ++ID Y
Sbjct: 240 IHGHIVRAGLD----SDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYF 295
Query: 346 RNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC-DGMVEIM--QAHAMVIHLGFEQNTW 402
++ E LF ++ SC RP T ++ +C D E + Q H + +GF+ ++
Sbjct: 296 KSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSF 355
Query: 403 VTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSG 462
+++L+ +Y+K G++ SA V + D+VSWT++I A +G AL+ F ++ SG
Sbjct: 356 ASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSG 415
Query: 463 TKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEA 522
TKPD +TFV +LSAC+HAGLV +G F SI + L+ +HY+CLVD+L R+G +
Sbjct: 416 TKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQL 475
Query: 523 MDVVSTIP--PSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAY 580
V+S +P PS+ + ++LG C +GNI +A Q+L +EP + YV ++N Y
Sbjct: 476 KSVISEMPMKPSKF---LWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIY 532
Query: 581 AAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSL 640
AA +W+E ++RKRM+E V K G S ++K K H+F + SHP +I FL++ L
Sbjct: 533 AAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRE-L 591
Query: 641 QPLMRETGYTPENSLLI 657
+ M+E GY P SL++
Sbjct: 592 RKKMKEEGYVPATSLVL 608
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 157/359 (43%), Gaps = 87/359 (24%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVS----YNSMIAVYLKNKDVHGAETIFKAMSERDV 117
I + + L+E +K+ + + V +N ++ +Y K + A +F M RD+
Sbjct: 92 IQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDL 151
Query: 118 VAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMS-- 175
+ + MV+GYA+ G L+ AR++FD MTE++++SWT++++GY + + EEAL L+ M
Sbjct: 152 CSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRV 211
Query: 176 --------------------------------------ERSVVTWTTMVSGFAQNGLVDH 197
+ V W++++ + + G +D
Sbjct: 212 PNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDE 271
Query: 198 ARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSA--- 254
AR FD + EK+ ++WT+M+ Y + ++ EG+ LF E+ R +G L+A
Sbjct: 272 ARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACAD 331
Query: 255 ------------------------------------NRVDEAIHLFETMPDRNHVSWTAM 278
++ A H+ + P + VSWT++
Sbjct: 332 LTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSL 391
Query: 279 VSGLAQNKMVEVARKYFDIM----PFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKN 333
+ G AQN + A KYFD++ D + +++A L+ + LE F + EK+
Sbjct: 392 IGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKH 450
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 156/371 (42%), Gaps = 97/371 (26%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKN------------------- 99
NV + G L+EARKLFDEM ++D+ S+ +M+ Y+K
Sbjct: 155 NVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNS 214
Query: 100 -----------------------KDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNA 136
K++HG I +A + D V S+++D Y K G +D A
Sbjct: 215 RPNIFTVSIAVAAAAAVKCIRRGKEIHGH--IVRAGLDSDEVLWSSLMDMYGKCGCIDEA 272
Query: 137 REVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQM---SER---------------- 177
R +FD + E++ SWTS+I YF+ R E LF ++ ER
Sbjct: 273 RNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADL 332
Query: 178 -------SVVTWTTMVS----GFAQNGLVD---------HARRFFDLMPEKNTIAWTAMV 217
V + T V FA + LVD A+ D P+ + ++WT+++
Sbjct: 333 TTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLI 392
Query: 218 KSYLDNGQFSEGYKLFLEMPERNVRSWNV----MISGCLSANRVDEAIHLFETMPDRNHV 273
NGQ E K F + + + +V ++S C A V++ + F ++ +++ +
Sbjct: 393 GGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRL 452
Query: 274 S-----WTAMVSGLAQNKMVEVARKYFDIMPFKDMA-AWSAMI---TAYVDEKLLGEAL- 323
S +T +V LA++ E + MP K W++++ + Y + L EA
Sbjct: 453 SHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQ 512
Query: 324 ELFNLVPEKNV 334
ELF + PE V
Sbjct: 513 ELFKIEPENPV 523
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 116/291 (39%), Gaps = 59/291 (20%)
Query: 291 ARKYFDIMPF---KDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRN 347
ARK + F ++++++ A + + D+K FN P G +++ R
Sbjct: 6 ARKLTTLHGFILKRNLSSFHASLKRFSDKKF-------FN--PNHEDG--GVVVERLCRA 54
Query: 348 GEAGEA---------LRLFILMLRSCFRPCVTTMTSIITSCD---GMVEIMQAHAMVIHL 395
GEA LR + +L +P +T ++I C + E + H +
Sbjct: 55 NRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTS 114
Query: 396 GFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVF 455
GF + N L+ +Y+K G L A VF+ + ++D+ SW M+ YA G A ++F
Sbjct: 115 GFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLF 174
Query: 456 -----------ARMVTSGTKPDE----ITFVGLLSACSHA-----------------GLV 483
MVT K D+ + L+ ++ +
Sbjct: 175 DEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCI 234
Query: 484 NQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEI 534
+G+ + I A L+ +S L+DM G+ G ++EA ++ I ++
Sbjct: 235 RRGKEIHGHIVRA-GLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDV 284
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 197/682 (28%), Positives = 344/682 (50%), Gaps = 77/682 (11%)
Query: 47 ISISHDWSLRKRNVEITILGRR--------GKLKEARKLFDEMPQRDAVSYNSMIAVYLK 98
+S++H ++++ ++ + R G L A LFDEMP+RD+VS+N+MI+ Y
Sbjct: 19 LSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTS 78
Query: 99 NKDVHGAETIFKAM----SERDVVAQSAMVDGYAKAGRLDNAREV----FDNMTERNAFS 150
+ A +F M S+ D + S ++ G A R D +V E N +
Sbjct: 79 CGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYV 138
Query: 151 WTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNT 210
+SL+ Y +C R E+A + F ++SE + V+W +++GF Q + A LM K
Sbjct: 139 GSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAA 198
Query: 211 IAWTA----MVKSYLDNGQFSEGYK------LFLEMPERNVRSWNVMISGCLSANRVDEA 260
+ A + + LD+ F K L L + + + N MIS V +A
Sbjct: 199 VTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGL-QHEITICNAMISSYADCGSVSDA 257
Query: 261 IHLFETMP-DRNHVSWTAMVSGLAQNKMVEVARKYF----------DIMPFKDM------ 303
+F+ + ++ +SW +M++G +++++ E A + F DI + +
Sbjct: 258 KRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSG 317
Query: 304 -----------------------AAWSAMITAYVD--EKLLGEALELFNLVPEKNVGIWN 338
+A +A+I+ Y+ + +AL LF + K++ WN
Sbjct: 318 EEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWN 377
Query: 339 TIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIM---QAHAMVIHL 395
+II G+ + G + +A++ F + S + ++++ SC + + Q HA+
Sbjct: 378 SIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKS 437
Query: 396 GFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSK-DVVSWTAMIVAYANHGHGHHALQV 454
GF N +V ++LI +YSK G + SA F+ + SK V+W AMI+ YA HG G +L +
Sbjct: 438 GFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDL 497
Query: 455 FARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLG 514
F++M K D +TF +L+ACSH GL+ +G + + ++ Y + ++EHY+ VD+LG
Sbjct: 498 FSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLG 557
Query: 515 RAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYV 574
RAGLVN+A +++ ++P + D VL LG C+ G I++A + LL +EP YV
Sbjct: 558 RAGLVNKAKELIESMPLNP-DPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYV 616
Query: 575 LLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYG 634
LS+ Y+ ++W+E A V+K MKE+ VKK+ G+S I+++ + F +RS+P ++IY
Sbjct: 617 SLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYM 676
Query: 635 F---LQQSLQPLMRETGYTPEN 653
L Q +Q L + G ++
Sbjct: 677 MIKDLTQEMQWLDSDNGVDADS 698
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 192/612 (31%), Positives = 302/612 (49%), Gaps = 71/612 (11%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYA 128
G + ARKLF+EMPQ +SYN +I +Y++ H A ++F M V + DGY
Sbjct: 63 GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGV---KCVPDGYT 119
Query: 129 ------KAGRLDNAR-------EVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMS 175
AG L + + + + R+ + +L++ Y G+ E A +FD M
Sbjct: 120 YPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMK 179
Query: 176 ERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKN------TIAWTAMVKSYLDNGQFSEG 229
R V++W TM+SG+ +NG ++ A FD M ++ TI V +L + +
Sbjct: 180 NRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRN 239
Query: 230 YKLFLEMPE--RNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKM 287
+E + N +++ L R+DEA +F+ M R+ ++WT M++G ++
Sbjct: 240 VHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGD 299
Query: 288 VEVARKYFDIMPFK---------------------------------------DMAAWSA 308
VE A + +M F+ D+ ++
Sbjct: 300 VENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETS 359
Query: 309 MITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPC 368
+I+ Y K + +F+ + + G W+ II G V+N +AL LF M R P
Sbjct: 360 LISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPN 419
Query: 369 VTTMTSIITSCDGMVEIMQA---HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVF- 424
+ T+ S++ + + ++ QA H + GF + L+ +YSK G L SA +F
Sbjct: 420 IATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFN 479
Query: 425 ---ELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAG 481
E KSKDVV W A+I Y HG GH+ALQVF MV SG P+EITF L+ACSH+G
Sbjct: 480 GIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSG 539
Query: 482 LVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVA 541
LV +G +F + Y + HY+C+VD+LGRAG ++EA ++++TI P E V A
Sbjct: 540 LVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTI-PFEPTSTVWGA 598
Query: 542 LLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNV 601
LL AC H N+++ KL LEP ++G YVLL+N YAA +W + +VR M+ +
Sbjct: 599 LLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGL 658
Query: 602 KKISGFSQIQVK 613
+K G S I+++
Sbjct: 659 RKKPGHSTIEIR 670
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/456 (21%), Positives = 188/456 (41%), Gaps = 59/456 (12%)
Query: 152 TSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLM------ 205
++L Y CG A +LF++M + S++++ ++ + + GL A F M
Sbjct: 53 STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVK 112
Query: 206 --PEKNTI-------------------------AW--------TAMVKSYLDNGQFSEGY 230
P+ T +W A++ Y++ G+
Sbjct: 113 CVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMAR 172
Query: 231 KLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM----PDRNHVSWTAMVSGLAQNK 286
+F M R+V SWN MISG +++A+ +F+ M D +H + +M+ K
Sbjct: 173 DVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLK 232
Query: 287 MVEVARKYFDIMPFKDMA----AWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIID 342
+E+ R ++ K + +A++ Y+ + EA +F+ + ++V W +I+
Sbjct: 233 DLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMIN 292
Query: 343 GYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQA---HAMVIHLGFEQ 399
GY +G+ AL L LM RP T+ S+++ C +++ H +
Sbjct: 293 GYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYS 352
Query: 400 NTWVTNALITLYSKSG--DLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFAR 457
+ + +LI++Y+K DLC VF W+A+I + AL +F R
Sbjct: 353 DIIIETSLISMYAKCKRVDLC--FRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKR 410
Query: 458 MVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAG 517
M +P+ T LL A + + Q + + ++ ++ + LV + + G
Sbjct: 411 MRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMS-SLDAATGLVHVYSKCG 469
Query: 518 LVNEAMDVVSTIPPSEIDEAVLV--ALLGACKLHGN 551
+ A + + I + V++ AL+ +HG+
Sbjct: 470 TLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 164/495 (33%), Positives = 276/495 (55%), Gaps = 29/495 (5%)
Query: 184 TMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEM------- 236
T+V+ + + G HA + FD MP ++ IAW A V + L+ S G L +
Sbjct: 43 TLVNVYGKCGAASHALQVFDEMPHRDHIAW-ASVLTALNQANLS-GKTLSVFSSVGSSSG 100
Query: 237 --PERNVRSWNVMISGCLSANRVDEA----IHLFETMPDRNHVSWTAMVSGLAQNKMVEV 290
P+ V ++ ++ C + +D H + + V +++V A+ ++
Sbjct: 101 LRPDDFV--FSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNS 158
Query: 291 ARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEA 350
A+ FD + K+ +W+AM++ Y EALELF ++P KN+ W +I G+V++G+
Sbjct: 159 AKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKG 218
Query: 351 GEALRLFILMLR---SCFRPCVTTMTSIITSCDGMVEIM---QAHAMVIHLGFEQNTWVT 404
EA +F M R P V ++SI+ +C + + Q H +VI LGF+ +++
Sbjct: 219 LEAFSVFTEMRRERVDILDPLV--LSSIVGACANLAASIAGRQVHGLVIALGFDSCVFIS 276
Query: 405 NALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTK 464
NALI +Y+K D+ +A +F ++ +DVVSWT++IV A HG AL ++ MV+ G K
Sbjct: 277 NALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVK 336
Query: 465 PDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMD 524
P+E+TFVGL+ ACSH G V +GR +F S+ Y + ++HY+CL+D+LGR+GL++EA +
Sbjct: 337 PNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAEN 396
Query: 525 VVSTIP-PSEIDEAVLVALLGACKLHGNIKVANSIGQKLL-SLEPTSSGGYVLLSNAYAA 582
++ T+P P DE ALL ACK G ++ I L+ S + Y+LLSN YA+
Sbjct: 397 LIHTMPFPP--DEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYAS 454
Query: 583 EEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQP 642
W + ++ R+++ E V+K G S ++V+ + +F+ GE SHP E+I+ L++ +
Sbjct: 455 ASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEE 514
Query: 643 LMRETGYTPENSLLI 657
+ GY P+ S ++
Sbjct: 515 MRIRNGYVPDTSWIL 529
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/447 (24%), Positives = 203/447 (45%), Gaps = 39/447 (8%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVY----LKNKDVHGAETIFKAMSE 114
N + + G+ G A ++FDEMP RD +++ S++ L K + ++ +
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 101
Query: 115 R-DVVAQSAMVDGYAKAGRLDNAREVFDNMT----ERNAFSWTSLISGYFRCGRTEEALQ 169
R D SA+V A G +D+ R+V + + +SL+ Y +CG A
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKA 161
Query: 170 LFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEG 229
+FD + ++ ++WT MVSG+A++G + A F ++P KN +WTA++ ++ +G+ E
Sbjct: 162 VFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEA 221
Query: 230 YKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVE 289
+ +F EM V + ++ + V +L ++ R V GL
Sbjct: 222 FSVFTEMRRERVDILDPLVLSSI----VGACANLAASIAGRQ-------VHGL------- 263
Query: 290 VARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGE 349
V FD F +A+I Y + A ++F+ + ++V W ++I G ++G+
Sbjct: 264 VIALGFDSCVFIS----NALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQ 319
Query: 350 AGEALRLFILMLRSCFRPCVTTMTSIITSCD--GMVEIMQA--HAMVIHLGFEQNTWVTN 405
A +AL L+ M+ +P T +I +C G VE + +M G +
Sbjct: 320 AEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYT 379
Query: 406 ALITLYSKSGDLCSAM-LVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTK 464
L+ L +SG L A L+ + D +W A++ A G G +++ +V+S
Sbjct: 380 CLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKL 439
Query: 465 PDEITFV---GLLSACSHAGLVNQGRR 488
D T++ + ++ S G V++ RR
Sbjct: 440 KDPSTYILLSNIYASASLWGKVSEARR 466
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 2/142 (1%)
Query: 389 HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHG-H 447
HA ++ LG Q + N L+ +Y K G A+ VF+ + +D ++W +++ A
Sbjct: 26 HAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLS 85
Query: 448 GHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYS 507
G + +SG +PD+ F L+ AC++ G ++ GR+V + N +V S
Sbjct: 86 GKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVK-S 144
Query: 508 CLVDMLGRAGLVNEAMDVVSTI 529
LVDM + GL+N A V +I
Sbjct: 145 SLVDMYAKCGLLNSAKAVFDSI 166
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 292 bits (748), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 182/650 (28%), Positives = 338/650 (52%), Gaps = 72/650 (11%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSE------- 114
+++ + K++ A K+F+ + +++ V +N+MI Y N + H +F M
Sbjct: 369 VSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDD 428
Query: 115 --------------------------------RDVVAQSAMVDGYAKAGRLDNAREVFDN 142
+++ +A+VD YAK G L++AR++F+
Sbjct: 429 FTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFER 488
Query: 143 MTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVT----------WTTMVSGFAQN 192
M +R+ +W ++I Y + EA LF +M+ +V+ T V G Q
Sbjct: 489 MCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG 548
Query: 193 GLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCL 252
V L +++ ++++ Y G + K+F +PE +V S N +I+G
Sbjct: 549 KQVHCLSVKCGL--DRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAG-Y 605
Query: 253 SANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWS- 307
S N ++EA+ LF+ M R + +++ +V + + + + ++ + + ++
Sbjct: 606 SQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGE 665
Query: 308 ----AMITAYVDEKLLGEALELFN-LVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLR 362
+++ Y++ + + EA LF+ L K++ +W ++ G+ +NG EAL+ + M
Sbjct: 666 YLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRH 725
Query: 363 SCFRPCVTTMTSIITSCDGMVEIMQA---HAMVIHLGFEQNTWVTNALITLYSKSGDLCS 419
P T +++ C + + + H+++ HL + + +N LI +Y+K GD+
Sbjct: 726 DGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKG 785
Query: 420 AMLVF-ELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACS 478
+ VF E+ + +VVSW ++I YA +G+ AL++F M S PDEITF+G+L+ACS
Sbjct: 786 SSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACS 845
Query: 479 HAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVV--STIPPSEIDE 536
HAG V+ GR++F+ + G Y + +V+H +C+VD+LGR G + EA D + + P D
Sbjct: 846 HAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKP---DA 902
Query: 537 AVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRM 596
+ +LLGAC++HG+ +KL+ LEP +S YVLLSN YA++ W++ +RK M
Sbjct: 903 RLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVM 962
Query: 597 KEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRE 646
+++ VKK+ G+S I V+ + H+F G++SH ++ +I FL+ L LM++
Sbjct: 963 RDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLED-LYDLMKD 1011
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 137/497 (27%), Positives = 235/497 (47%), Gaps = 54/497 (10%)
Query: 41 RNFTASISISHDWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLK-N 99
R + SHD + +R +EI + + KL ++RK+FDEMPQR +A+ L+
Sbjct: 31 RRIYGHVLPSHD-QIHQRLLEICL--GQCKLFKSRKVFDEMPQR--------LALALRIG 79
Query: 100 KDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYF 159
K VH I SE + +A+VD YAK ++ A + FD + E++ +W S++S Y
Sbjct: 80 KAVHSKSLILGIDSEGRL--GNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYS 136
Query: 160 RCGRTEEALQLFDQMSERSVV----TWTTMVSGFAQNGLVDHARRFFDLMP----EKNTI 211
G+ + L+ F + E + T++ ++S A+ V+ R+ M E+N+
Sbjct: 137 SIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSY 196
Query: 212 AWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRN 271
A+V Y + S+ ++F + + N W + SG + A +EA+ +FE M D
Sbjct: 197 CGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG 256
Query: 272 HVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPE 331
H D A+ +I Y+ L +A LF +
Sbjct: 257 HR---------------------------PDHLAFVTVINTYIRLGKLKDARLLFGEMSS 289
Query: 332 KNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI---MQA 388
+V WN +I G+ + G A+ F M +S + +T+ S++++ + + +
Sbjct: 290 PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVV 349
Query: 389 HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHG 448
HA I LG N +V ++L+++YSK + +A VFE L+ K+ V W AMI YA++G
Sbjct: 350 HAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGES 409
Query: 449 HHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSC 508
H +++F M +SG D+ TF LLS C+ + + G + F SI L + +
Sbjct: 410 HKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNA 468
Query: 509 LVDMLGRAGLVNEAMDV 525
LVDM + G + +A +
Sbjct: 469 LVDMYAKCGALEDARQI 485
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 136/300 (45%), Gaps = 24/300 (8%)
Query: 20 GVCYHHRRRVFSQCQPIFRFLRNFTASISISHDWSLRKRNVEITILGRRGKLKEARKLFD 79
G C + + +++ + S+ D L + I + + G +K+ARK+F
Sbjct: 529 GACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFS 588
Query: 80 EMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDV----VAQSAMVDGYAKAGRLDN 135
+P+ VS N++IA Y +N ++ A +F+ M R V + + +V+ K L
Sbjct: 589 SLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTL 647
Query: 136 AREVFDNMTER-----NAFSWTSLISGYFRCGRTEEALQLFDQMSE-RSVVTWTTMVSGF 189
+ +T+R + SL+ Y EA LF ++S +S+V WT M+SG
Sbjct: 648 GTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGH 707
Query: 190 AQNGLVDHARRFFD------LMPEKNTIAWTAMVKSYLDNGQFSEG---YKLFLEMP-ER 239
+QNG + A +F+ ++P++ T V S L + EG + L + +
Sbjct: 708 SQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSS--LREGRAIHSLIFHLAHDL 765
Query: 240 NVRSWNVMISGCLSANRVDEAIHLFETMPDR-NHVSWTAMVSGLAQNKMVEVARKYFDIM 298
+ + N +I + + +F+ M R N VSW ++++G A+N E A K FD M
Sbjct: 766 DELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSM 825
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 291 bits (746), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 188/621 (30%), Positives = 315/621 (50%), Gaps = 68/621 (10%)
Query: 65 LGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQS-AM 123
L L+ ARK+FDE+P+ ++ ++N++I Y G + + + D+V++S
Sbjct: 74 LSSFASLEYARKVFDEIPKPNSFAWNTLIRAY-----ASGPDPVLSIWAFLDMVSESQCY 128
Query: 124 VDGYAKAGRLDNAREV--------FDNMTERNA-----FSWTSLISGYFRCGRTEEALQL 170
+ Y + A EV M ++A F SLI YF CG
Sbjct: 129 PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGD------- 181
Query: 171 FDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGY 230
+D A + F + EK+ ++W +M+ ++ G +
Sbjct: 182 ------------------------LDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKAL 217
Query: 231 KLFLEMPERNVRSWNVMISGCLSANRVDEAI--------HLFETMPDRNHVSWTAMVSGL 282
+LF +M +V++ +V + G LSA + ++ E + N AM+
Sbjct: 218 ELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMY 277
Query: 283 AQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIID 342
+ +E A++ FD M KD W+ M+ Y + A E+ N +P+K++ WN +I
Sbjct: 278 TKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALIS 337
Query: 343 GYVRNGEAGEALRLFI-LMLRSCFRPCVTTMTSIITSCD--GMVEIMQ-AHAMVIHLGFE 398
Y +NG+ EAL +F L L+ + T+ S +++C G +E+ + H+ + G
Sbjct: 338 AYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIR 397
Query: 399 QNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARM 458
N VT+ALI +YSK GDL + VF ++ +DV W+AMI A HG G+ A+ +F +M
Sbjct: 398 MNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKM 457
Query: 459 VTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGL 518
+ KP+ +TF + ACSH GLV++ +F ++ Y + + +HY+C+VD+LGR+G
Sbjct: 458 QEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGY 517
Query: 519 VNEAMDVVST--IPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLL 576
+ +A+ + IPPS +V ALLGACK+H N+ +A +LL LEP + G +VLL
Sbjct: 518 LEKAVKFIEAMPIPPS---TSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLL 574
Query: 577 SNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFL 636
SN YA +W+ +++RK M+ +KK G S I++ G H F G+ +HP E++YG L
Sbjct: 575 SNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKL 634
Query: 637 QQSLQPLMRETGYTPENSLLI 657
+ ++ L + GY PE S ++
Sbjct: 635 HEVMEKL-KSNGYEPEISQVL 654
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 145/309 (46%), Gaps = 28/309 (9%)
Query: 29 VFSQCQPI--FRFLRNFTASISISH-DWSLRKRNVEITILGRRGKLKEARKLFDEMPQRD 85
V S C I F R + I + + +L N + + + G +++A++LFD M ++D
Sbjct: 238 VLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKD 297
Query: 86 AVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMT- 144
V++ +M+ Y ++D A + +M ++D+VA +A++ Y + G+ + A VF +
Sbjct: 298 NVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQL 357
Query: 145 ----ERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV-----VTWTTMVSGFAQNGLV 195
+ N + S +S + G E + + + + VT + ++ +++ G +
Sbjct: 358 QKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVT-SALIHMYSKCGDL 416
Query: 196 DHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMIS----GC 251
+ +R F+ + +++ W+AM+ +G +E +F +M E NV+ V + C
Sbjct: 417 EKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCAC 476
Query: 252 LSANRVDEAIHLFETM-------PDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPF-KDM 303
VDEA LF M P+ H + +V L ++ +E A K+ + MP
Sbjct: 477 SHTGLVDEAESLFHQMESNYGIVPEEKH--YACIVDVLGRSGYLEKAVKFIEAMPIPPST 534
Query: 304 AAWSAMITA 312
+ W A++ A
Sbjct: 535 SVWGALLGA 543
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 168/507 (33%), Positives = 267/507 (52%), Gaps = 16/507 (3%)
Query: 154 LISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAW 213
LI Y +CG+ +A ++FDQM R++ +W MVSG+ ++G++ AR FD MPE++ ++W
Sbjct: 88 LIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSW 147
Query: 214 TAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDR--- 270
MV Y +G E + E ++ +G L+A + L +
Sbjct: 148 NTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLV 207
Query: 271 -----NHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALEL 325
N V +++ A+ +E A++ FD M KD+ W+ +I+ Y + A +L
Sbjct: 208 AGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKL 267
Query: 326 FNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI 385
F +PEKN W +I GYVR G AL LF M+ +P T +S + + + +
Sbjct: 268 FCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASL 327
Query: 386 MQA---HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSK-DVVSWTAMIVA 441
H +I N V ++LI +YSKSG L ++ VF + K D V W MI A
Sbjct: 328 RHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISA 387
Query: 442 YANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNL 501
A HG GH AL++ M+ +P+ T V +L+ACSH+GLV +G R F+S+ + +
Sbjct: 388 LAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVP 447
Query: 502 KVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQK 561
EHY+CL+D+LGRAG E M + + P E D+ + A+LG C++HGN ++ +
Sbjct: 448 DQEHYACLIDLLGRAGCFKELMRKIEEM-PFEPDKHIWNAILGVCRIHGNEELGKKAADE 506
Query: 562 LLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFV 621
L+ L+P SS Y+LLS+ YA +W+ ++R MK++ V K S I+++ K F V
Sbjct: 507 LIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTV 566
Query: 622 --GERSHPQVEEIYGFLQQSLQPLMRE 646
G +H + EEIY F+ +L ++ E
Sbjct: 567 SDGSHAHARKEEIY-FILHNLAAVIEE 592
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 190/424 (44%), Gaps = 68/424 (16%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYA 128
GK +A K+FD+M R+ S+N+M++ Y+K+ + A +F +M ERDVV+ + MV GYA
Sbjct: 96 GKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYA 155
Query: 129 KAGRLDNA----REVFDNMTERNAFSWT-------------------------------- 152
+ G L A +E + + N FS+
Sbjct: 156 QDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVV 215
Query: 153 ---SLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKN 209
S+I Y +CG+ E A + FD+M+ + + WTT++SG+A+ G ++ A + F MPEKN
Sbjct: 216 LSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKN 275
Query: 210 TIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPD 269
++WTA++ Y+ G + LF +M V+ S CL A
Sbjct: 276 PVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCA--------------- 320
Query: 270 RNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLV 329
+A ++ L K + ++ P + S++I Y L + +F +
Sbjct: 321 ------SASIASLRHGKEIHGYMIRTNVRP--NAIVISSLIDMYSKSGSLEASERVFRIC 372
Query: 330 PEKNVGI-WNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC--DGMVE-- 384
+K+ + WNT+I ++G +ALR+ M++ +P TT+ I+ +C G+VE
Sbjct: 373 DDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEG 432
Query: 385 IMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLK-SKDVVSWTAMIVAYA 443
+ +M + G + LI L ++G M E + D W A++
Sbjct: 433 LRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCR 492
Query: 444 NHGH 447
HG+
Sbjct: 493 IHGN 496
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 185/625 (29%), Positives = 321/625 (51%), Gaps = 68/625 (10%)
Query: 75 RKLFDEMPQRDAVSYNSMIAVYLKNK-------------------------DVHGAETIF 109
RK+FD M +++ V++N++I+ Y+K +V A +I
Sbjct: 168 RKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSIS 227
Query: 110 KAMSE----------------RDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTS 153
+++ + +D+ S+ + YA+ G ++++R VFD+ ERN W +
Sbjct: 228 RSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNT 287
Query: 154 LISGYFRCGRTEEALQLF-DQMSERSVV----TWTTMVSGFAQNGLVDHARRFFDLMP-- 206
+I Y + E+++LF + + + +V T+ S + V+ R+F +
Sbjct: 288 MIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKN 347
Query: 207 --EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLF 264
E + +++ Y G + + +FL M ER+V SWN MIS + DE + L
Sbjct: 348 FRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLV 407
Query: 265 ETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIM-----PFKDMAAWSAMITAYVD 315
M + ++++ TA++S + + E+ ++ + F+ M ++ +I Y
Sbjct: 408 YEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY--LIDMYSK 465
Query: 316 EKLLGEALELF--NLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMT 373
L+ + +LF + E++ WN++I GY +NG + +F ML RP T+
Sbjct: 466 SGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVA 525
Query: 374 SIITSCD--GMVEI-MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSK 430
SI+ +C G V++ Q H I +QN +V +AL+ +YSK+G + A +F K +
Sbjct: 526 SILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKER 585
Query: 431 DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVF 490
+ V++T MI+ Y HG G A+ +F M SG KPD ITFV +LSACS++GL+++G ++F
Sbjct: 586 NSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIF 645
Query: 491 DSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHG 550
+ ++ YN+ EHY C+ DMLGR G VNEA + V + + +LLG+CKLHG
Sbjct: 646 EEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHG 705
Query: 551 NIKVANSIGQKLLSLEPTS--SGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFS 608
+++A ++ ++L + SG VLLSN YA E++W +VR+ M+EK +KK G S
Sbjct: 706 ELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRS 765
Query: 609 QIQVKGKNHLFFVGERSHPQVEEIY 633
I++ G + F ++ HP EIY
Sbjct: 766 GIEIAGYVNCFVSRDQEHPHSSEIY 790
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 103/471 (21%), Positives = 205/471 (43%), Gaps = 58/471 (12%)
Query: 136 AREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERS------VVTWTTMVSGF 189
AR++FD + + W ++I G+ EAL + +M + + T+++ +
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 190 AQNGLVDHAR----RFFDLMPEKNTIAWTAMVKSYL------DNGQFSEGYKLFLEMPER 239
A+ + + + + + +++ Y+ D ++ K+F M +
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRK 177
Query: 240 NVRSWNVMISGCLSANRVDEAIHLFETM----PDRNHVSWTAMVSGLAQNKMVEVARKYF 295
NV +WN +IS + R EA F M + VS+ + ++ ++ ++ A ++
Sbjct: 178 NVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFY 237
Query: 296 DIM------PFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGE 349
+M KD+ S+ I+ Y + + + +F+ E+N+ +WNT+I YV+N
Sbjct: 238 GLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDC 297
Query: 350 AGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQA------HAMVIHLGFEQNTWV 403
E++ LF+ + S + V+ + + + + + Q H V E +
Sbjct: 298 LVESIELFLEAIGS--KEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVI 355
Query: 404 TNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGT 463
N+L+ +YS+ G + + VF ++ +DVVSW MI A+ +G L + M G
Sbjct: 356 VNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 415
Query: 464 KPDEITFVGLLSACS-----------HAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDM 512
K D IT LLSA S HA L+ QG + F+ + S L+DM
Sbjct: 416 KIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ-FEGMN------------SYLIDM 462
Query: 513 LGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLL 563
++GL+ + + +E D+A +++ +G+ + + +K+L
Sbjct: 463 YSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKML 513
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 199/661 (30%), Positives = 310/661 (46%), Gaps = 78/661 (11%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMS----E 114
N +++ G L A +F M QRDAV+YN++I + A +FK M E
Sbjct: 327 NALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 386
Query: 115 RDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISG-----YFRCGRTEEALQ 169
D +++V + G L +++ T + F+ + I G Y +C E AL
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQL-HAYTTKLGFASNNKIEGALLNLYAKCADIETALD 445
Query: 170 LFDQMSERSVVTWTTMVSGFAQNGLVDHARRFF---------DLMPEK------------ 208
F + +VV W M+ + GL+D R F +++P +
Sbjct: 446 YFLETEVENVVLWNVMLVAY---GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR 502
Query: 209 ---------------------NTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVM 247
N + ++ Y G+ + + + ++V SW M
Sbjct: 503 LGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTM 562
Query: 248 ISGCLSANRVDEAIHLFETMPDR----------NHVSWTAMVSGLAQNKMVE---VARKY 294
I+G N D+A+ F M DR N VS A + L + + + +
Sbjct: 563 IAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF 622
Query: 295 FDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEAL 354
+PF++ A++T Y + E+ F + WN ++ G+ ++G EAL
Sbjct: 623 SSDLPFQN-----ALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEAL 677
Query: 355 RLFILMLRSCFRPCVTTMTSIITSCD---GMVEIMQAHAMVIHLGFEQNTWVTNALITLY 411
R+F+ M R T S + + M + Q HA++ G++ T V NALI++Y
Sbjct: 678 RVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMY 737
Query: 412 SKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFV 471
+K G + A F + +K+ VSW A+I AY+ HG G AL F +M+ S +P+ +T V
Sbjct: 738 AKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLV 797
Query: 472 GLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPP 531
G+LSACSH GLV++G F+S+ Y L+ K EHY C+VDML RAGL++ A + + +P
Sbjct: 798 GVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPI 857
Query: 532 SEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQ 591
D V LL AC +H N+++ LL LEP S YVLLSN YA ++WD
Sbjct: 858 KP-DALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDL 916
Query: 592 VRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTP 651
R++MKEK VKK G S I+VK H F+VG+++HP +EI+ + Q L E GY
Sbjct: 917 TRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQD-LTKRASEIGYVQ 975
Query: 652 E 652
+
Sbjct: 976 D 976
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 120/479 (25%), Positives = 205/479 (42%), Gaps = 42/479 (8%)
Query: 65 LGRRGKLKEARKLFDEMPQ----RDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQ 120
L G L E RKL ++ + + + YL D++GA +F M ER +
Sbjct: 95 LKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTW 154
Query: 121 SAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFR-CGRTEEALQLFDQMSER-- 177
+ M+ A + +F M N SG C A + +Q+ R
Sbjct: 155 NKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIL 214
Query: 178 ------SVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYK 231
S V ++ +++NG VD ARR FD + K+ +W AM+ N +E +
Sbjct: 215 YQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIR 274
Query: 232 LFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVA 291
LF +M + S LSA + E++ + E + GL V
Sbjct: 275 LFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL------------HGL-------VL 315
Query: 292 RKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAG 351
+ F D +A+++ Y L A +F+ + +++ +NT+I+G + G
Sbjct: 316 KLGFS----SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGE 371
Query: 352 EALRLFILMLRSCFRPCVTTMTSIITSC--DG-MVEIMQAHAMVIHLGFEQNTWVTNALI 408
+A+ LF M P T+ S++ +C DG + Q HA LGF N + AL+
Sbjct: 372 KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALL 431
Query: 409 TLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEI 468
LY+K D+ +A+ F + ++VV W M+VAY ++ ++F +M P++
Sbjct: 432 NLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQY 491
Query: 469 TFVGLLSACSHAGLVNQGRRVFDS-IKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVV 526
T+ +L C G + G ++ IK + LN V S L+DM + G ++ A D++
Sbjct: 492 TYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV--CSVLIDMYAKLGKLDTAWDIL 548
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 127/531 (23%), Positives = 223/531 (41%), Gaps = 77/531 (14%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKN------------------- 99
N I + R G + AR++FD + +D S+ +MI+ KN
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 285
Query: 100 ----------------------KDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAR 137
+ +HG + K D +A+V Y G L +A
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHG--LVLKLGFSSDTYVCNALVSLYFHLGNLISAE 343
Query: 138 EVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMS----ERSVVTWTTMVSGFAQNG 193
+F NM++R+A ++ +LI+G +CG E+A++LF +M E T ++V + +G
Sbjct: 344 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADG 403
Query: 194 LVDHARRFFDLMPE----KNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMI- 248
+ ++ + N A++ Y FLE NV WNVM+
Sbjct: 404 TLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 463
Query: 249 -SGCL----SANRVDEAIHLFETMPDRNHVSWTAMVSG--------LAQNKMVEVARKYF 295
G L ++ R+ + + E +P N ++ +++ L + ++ + F
Sbjct: 464 AYGLLDDLRNSFRIFRQMQIEEIVP--NQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF 521
Query: 296 DIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALR 355
+ + S +I Y L A ++ K+V W T+I GY + +AL
Sbjct: 522 QLNAY----VCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALT 577
Query: 356 LFILMLRSCFRPCVTTMTSIITSCDGMV---EIMQAHAMVIHLGFEQNTWVTNALITLYS 412
F ML R +T+ +++C G+ E Q HA GF + NAL+TLYS
Sbjct: 578 TFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYS 637
Query: 413 KSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVG 472
+ G + + L FE ++ D ++W A++ + G+ AL+VF RM G + TF
Sbjct: 638 RCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGS 697
Query: 473 LLSACSHAGLVNQGRRVFDSI-KGAYNLNLKVEHYSCLVDMLGRAGLVNEA 522
+ A S + QG++V I K Y+ +V + L+ M + G +++A
Sbjct: 698 AVKAASETANMKQGKQVHAVITKTGYDSETEV--CNALISMYAKCGSISDA 746
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 194/624 (31%), Positives = 317/624 (50%), Gaps = 45/624 (7%)
Query: 62 ITILGRRGKLKEARKLFDEMPQ---RDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVV 118
I++ R G L +AR +F+ + D +NS++ + + A +++ M +R +
Sbjct: 96 ISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLT 155
Query: 119 AQSAMVDGYAKA----GRLDNAR----EVFDNMTERNAFSWTSLISGYFRCGRTEEALQL 170
++ +A GR R +V + N L++ Y + GR +A L
Sbjct: 156 GDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNL 215
Query: 171 FDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQF 226
F +M R+ ++W M+ GF+Q + A + F+ M + + + WT+++ + G+F
Sbjct: 216 FVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKF 275
Query: 227 SEGYKLF--LEMPERNV--RSWNVMISGC--LSANRVDEAIHLF-------ETMPDRNHV 273
+ K F + M V + V S C L A + E +H + E +P RN
Sbjct: 276 EDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRN-- 333
Query: 274 SWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPE-- 331
A++ + V+ A F + K + +W+++IT++VD L EAL LF+ + E
Sbjct: 334 ---ALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMN 390
Query: 332 ------KNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI 385
NV W ++I G G ++L F M S T+ I++ C + +
Sbjct: 391 HVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPAL 450
Query: 386 ---MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAY 442
+ H VI +N V NAL+ +Y+K G L LVFE ++ KD++SW ++I Y
Sbjct: 451 NLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGY 510
Query: 443 ANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLK 502
HG AL +F RM++SG PD I V +LSACSHAGLV +GR +F S+ + L +
Sbjct: 511 GMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQ 570
Query: 503 VEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKL 562
EHY+C+VD+LGR G + EA ++V + P E VL ALL +C++H N+ +A I +L
Sbjct: 571 QEHYACIVDLLGRVGFLKEASEIVKNM-PMEPKVCVLGALLNSCRMHKNVDIAEGIASQL 629
Query: 563 LSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVG 622
LEP +G Y+LLSN Y+A +W+E A VR K+K++KK+SG S I+VK K + F G
Sbjct: 630 SVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSG 689
Query: 623 ERSHPQVEEIYGFLQQSLQPLMRE 646
+ E IY L+ + ++++
Sbjct: 690 SIVQSEFETIYPVLEDLVSHMLKK 713
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 180/390 (46%), Gaps = 35/390 (8%)
Query: 29 VFSQCQPIFRF--LRNF-TASISISHDWSLRKRNVEITILGRRGKLKEARKLFDEMPQRD 85
+ C+ + RF R F T I I +L N +T+ + G++ +A LF EMP R+
Sbjct: 164 ILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRN 223
Query: 86 AVSYNSMIAVYLKNKDVHGAETIFKAMSER----DVVAQSAMVDGYAKAGRLDNAREVFD 141
+S+N MI + + D A IF+ M D V ++++ +++ G+ ++ + F
Sbjct: 224 RMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFH 283
Query: 142 NM-TERNAFSWTSLISGYFRCGRTEEALQLFDQMS--------ERSVVTWTTMVSGFAQN 192
M NA S +L + C EAL + +++ E + + ++ + +
Sbjct: 284 LMRMSGNAVSGEALAVFFSVCAEL-EALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQ 342
Query: 193 GLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPE--------RNVRSW 244
G V A F + K +W +++ S++D G+ E LF E+ E NV +W
Sbjct: 343 GKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTW 402
Query: 245 NVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIMPF 300
+I GC R D+++ F M N V+ ++S A+ + + R+ +
Sbjct: 403 TSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIR 462
Query: 301 KDMA----AWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRL 356
M+ +A++ Y LL E +F + +K++ WN+II GY +G A +AL +
Sbjct: 463 TSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSM 522
Query: 357 FILMLRSCFRPCVTTMTSIITSCD--GMVE 384
F M+ S F P + +++++C G+VE
Sbjct: 523 FDRMISSGFHPDGIALVAVLSACSHAGLVE 552
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 285 bits (728), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 185/656 (28%), Positives = 330/656 (50%), Gaps = 70/656 (10%)
Query: 66 GRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAM------------- 112
GR L A KLFDEMP+RD +++N ++ V L++ + A +F+ M
Sbjct: 34 GRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMV 93
Query: 113 ------SERDVVAQSAMVDG--------------------YAKAGRLDNAREVFDNMTER 146
S ++ A+ + G Y++ G+L+ +R+VF++M +R
Sbjct: 94 KLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR 153
Query: 147 NAFSWTSLISGYFRCGRTEEALQLFDQMS----ERSVVTWTTMVSGFAQNGLVDHA---- 198
N SW S++S Y + G ++A+ L D+M + +VTW +++SG+A GL A
Sbjct: 154 NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVL 213
Query: 199 --RRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCL---- 252
+ L P ++I ++++++ + G G K RN ++V + L
Sbjct: 214 KRMQIAGLKPSTSSI--SSLLQAVAEPGHLKLG-KAIHGYILRNQLWYDVYVETTLIDMY 270
Query: 253 -SANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFK----DMAAWS 307
+ A +F+ M +N V+W ++VSGL+ +++ A M + D W+
Sbjct: 271 IKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWN 330
Query: 308 AMITAYVDEKLLGEALELFNLVPEK----NVGIWNTIIDGYVRNGEAGEALRLFILMLRS 363
++ + Y +AL++ + EK NV W I G +NG AL++FI M
Sbjct: 331 SLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEE 390
Query: 364 CFRPCVTTMTSI--ITSCDGMVEI-MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSA 420
P TM+++ I C ++ + H + + +V AL+ +Y KSGDL SA
Sbjct: 391 GVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSA 450
Query: 421 MLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHA 480
+ +F +K+K + SW M++ YA G G + F+ M+ +G +PD ITF +LS C ++
Sbjct: 451 IEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNS 510
Query: 481 GLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLV 540
GLV +G + FD ++ Y + +EH SC+VD+LGR+G ++EA D + T+ D +
Sbjct: 511 GLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKP-DATIWG 569
Query: 541 ALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKN 600
A L +CK+H ++++A ++L LEP +S Y+++ N Y+ +W++ ++R M+
Sbjct: 570 AFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNR 629
Query: 601 VKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPENSLL 656
V+ +S IQ+ H+F+ ++HP +IY F L M+++GY P+ S +
Sbjct: 630 VRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIY-FELYKLVSEMKKSGYVPDTSCI 684
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/457 (25%), Positives = 204/457 (44%), Gaps = 45/457 (9%)
Query: 102 VHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRC 161
+HG I + + D SA + Y + L A ++FD M +R+ +W ++ R
Sbjct: 9 IHGG-LIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRS 67
Query: 162 GRTEEALQLFDQMSERSVVTW-TTMVS---------GFAQNGLVDHARRFFDLMPEKNTI 211
G E+A++LF +M + +TMV GFA+ G H L E N
Sbjct: 68 GNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAE-GRQIHG-YVLRLGLESNVS 125
Query: 212 AWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM---- 267
+++ Y NG+ K+F M +RN+ SWN ++S VD+AI L + M
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 268 --PDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKL------L 319
PD V+W +++SG A + + A M + ++ I++ + L
Sbjct: 186 LKPDI--VTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKL 243
Query: 320 GEALELFNLVPE--KNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIIT 377
G+A+ + L + +V + T+ID Y++ G A +F +M + S+++
Sbjct: 244 GKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMM----DAKNIVAWNSLVS 299
Query: 378 SCDGMVEIMQAHAMVIHL---GFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSK---- 430
+ A A++I + G + + N+L + Y+ G A+ V +K K
Sbjct: 300 GLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAP 359
Query: 431 DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVF 490
+VVSWTA+ + +G+ +AL+VF +M G P+ T LL L++ G+ V
Sbjct: 360 NVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVH 419
Query: 491 DSIKGAYNLNLKVEHY--SCLVDMLGRAGLVNEAMDV 525
NL + Y + LVDM G++G + A+++
Sbjct: 420 GF---CLRKNLICDAYVATALVDMYGKSGDLQSAIEI 453
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 168/388 (43%), Gaps = 63/388 (16%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMS----E 114
N I + R GKL+ +RK+F+ M R+ S+NS+++ Y K V A + M +
Sbjct: 128 NSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLK 187
Query: 115 RDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLIS---------GYFRCGRTE 165
D+V ++++ GYA G +A V M TS IS G+ + G+
Sbjct: 188 PDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAI 247
Query: 166 EALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQ 225
L +Q+ V TT++ + + G + +AR FD+M KN +AW ++V
Sbjct: 248 HGYILRNQL-WYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACL 306
Query: 226 FSEGYKLFLEMPERNVR----SWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTA 277
+ L + M + ++ +WN + SG + + ++A+ + M ++ N VSWTA
Sbjct: 307 LKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTA 366
Query: 278 MVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMIT-------------------------- 311
+ SG ++N A K F M + + +A ++
Sbjct: 367 IFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKN 426
Query: 312 ----AYVDEKL---------LGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFI 358
AYV L L A+E+F + K++ WN ++ GY G E + F
Sbjct: 427 LICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFS 486
Query: 359 LMLRSCFRPCVTTMTSIITSC--DGMVE 384
+ML + P T TS+++ C G+V+
Sbjct: 487 VMLEAGMEPDAITFTSVLSVCKNSGLVQ 514
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 190/662 (28%), Positives = 326/662 (49%), Gaps = 73/662 (11%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKN------------------- 99
N ++ G G + +A +LFD MP+R+ VS+NSMI V+ N
Sbjct: 226 NALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGD 285
Query: 100 --------------------------KDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRL 133
K VHG K ++++V +A++D Y+K G +
Sbjct: 286 GAFMPDVATLVTVLPVCAREREIGLGKGVHGWAV--KLRLDKELVLNNALMDMYSKCGCI 343
Query: 134 DNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQM------SERSVVTWTTMVS 187
NA+ +F +N SW +++ G+ G T + QM + VT V
Sbjct: 344 TNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVP 403
Query: 188 GFAQNGLVDHARRF--FDLMPE--KNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRS 243
+ + + L E N + A V SY G S ++F + + V S
Sbjct: 404 VCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNS 463
Query: 244 WNVMISGCLSAN--RVDEAIHL----FETMPDRNHVSWTAMVSGLAQNKMVEVARKY--F 295
WN +I G +N R+ HL +PD V +++S ++ K + + ++ F
Sbjct: 464 WNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTV--CSLLSACSKLKSLRLGKEVHGF 521
Query: 296 DIMPF--KDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEA 353
I + +D+ + ++++ Y+ L LF+ + +K++ WNT+I GY++NG A
Sbjct: 522 IIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRA 581
Query: 354 LRLFILMLRSCFRPCVTTMTSIITSCDGMVEIM---QAHAMVIHLGFEQNTWVTNALITL 410
L +F M+ + C +M + +C + + +AHA + E + ++ +LI +
Sbjct: 582 LGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDM 641
Query: 411 YSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITF 470
Y+K+G + + VF LK K SW AMI+ Y HG A+++F M +G PD++TF
Sbjct: 642 YAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTF 701
Query: 471 VGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIP 530
+G+L+AC+H+GL+++G R D +K ++ L ++HY+C++DMLGRAG +++A+ VV+
Sbjct: 702 LGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEM 761
Query: 531 PSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFA 590
E D + +LL +C++H N+++ + KL LEP YVLLSN YA +W++
Sbjct: 762 SEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVR 821
Query: 591 QVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYT 650
+VR+RM E +++K +G S I++ K F VGER EEI L L+ + + GY
Sbjct: 822 KVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKS-LWSILEMKISKMGYR 880
Query: 651 PE 652
P+
Sbjct: 881 PD 882
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 179/432 (41%), Gaps = 49/432 (11%)
Query: 98 KNKDVHGAETIFKAMS-----ERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWT 152
K KD+ I + +S D V + ++ YA G D++R VFD + +N F W
Sbjct: 96 KRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWN 155
Query: 153 SLISGYFRCGRTEEALQLFDQMSERSVV-----TWTTMVS----------GFAQNGLVDH 197
++IS Y R +E L+ F +M + + T+ ++ G A +GLV
Sbjct: 156 AVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVK 215
Query: 198 ARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRV 257
D+ A+V Y +G ++ +LF MPERN+ SWN MI S N
Sbjct: 216 TGLVEDV------FVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR-VFSDNGF 268
Query: 258 DEAIHLF--ETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWS-------- 307
E L E M + ++ V+ L ++ V + +I K + W+
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVT--VLPVCAREREIGLGKGVHGWAVKLRLDKE 326
Query: 308 -----AMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLR 362
A++ Y + A +F + KNV WNT++ G+ G+ + ML
Sbjct: 327 LVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 386
Query: 363 SC--FRPCVTTMTSIITSC---DGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDL 417
+ T+ + + C + + + H + F N V NA + Y+K G L
Sbjct: 387 GGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSL 446
Query: 418 CSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSAC 477
A VF ++SK V SW A+I +A +L +M SG PD T LLSAC
Sbjct: 447 SYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC 506
Query: 478 SHAGLVNQGRRV 489
S + G+ V
Sbjct: 507 SKLKSLRLGKEV 518
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 161/391 (41%), Gaps = 70/391 (17%)
Query: 39 FLRNFTASISISHDWSLRKR--------NVEITILGRRGKLKEARKLFDEMPQRDAVSYN 90
F +F S+ H +SL++ N + + G L A+++F + + S+N
Sbjct: 406 FHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWN 465
Query: 91 SMIAVYLKNKDVHGAETIFKAMSERDVVAQS----AMVDGYAKAGRLDNAREV----FDN 142
++I + ++ D + M ++ S +++ +K L +EV N
Sbjct: 466 ALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRN 525
Query: 143 MTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFF 202
ER+ F + S++S Y CG LFD M ++S+V+W T+++G+ QNG D A F
Sbjct: 526 WLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVF 585
Query: 203 -------------DLMP--------------------------EKNTIAWTAMVKSYLDN 223
+MP E + +++ Y N
Sbjct: 586 RQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKN 645
Query: 224 GQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNH----VSWTAMV 279
G ++ K+F + E++ SWN MI G EAI LFE M H +++ ++
Sbjct: 646 GSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVL 705
Query: 280 SGLAQNKMVEVARKYFDIMPFK-----DMAAWSAMITAYVDEKLLGEALELF--NLVPEK 332
+ + ++ +Y D M ++ ++ +I L +AL + + E
Sbjct: 706 TACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEA 765
Query: 333 NVGIWNTIIDGYV--RNGEAGE--ALRLFIL 359
+VGIW +++ +N E GE A +LF L
Sbjct: 766 DVGIWKSLLSSCRIHQNLEMGEKVAAKLFEL 796
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 100/503 (19%), Positives = 200/503 (39%), Gaps = 82/503 (16%)
Query: 51 HDWSLRKR--------NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDV 102
H W+++ R N + + + G + A+ +F ++ VS+N+M+ + D
Sbjct: 315 HGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDT 374
Query: 103 HGAETIFKAM--SERDVVAQ---------------------------------------S 121
HG + + M DV A +
Sbjct: 375 HGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVAN 434
Query: 122 AMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVV- 180
A V YAK G L A+ VF + + SW +LI G+ + +L QM ++
Sbjct: 435 AFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLP 494
Query: 181 ---TWTTMVSGFAQNGLVDHARRFFDLMP----EKNTIAWTAMVKSYLDNGQFSEGYKLF 233
T +++S ++ + + + E++ + +++ Y+ G+ LF
Sbjct: 495 DSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALF 554
Query: 234 LEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARK 293
M ++++ SWN +I+G L D A+ +F M V + + G++ +
Sbjct: 555 DAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQM-----VLYGIQLCGISMMPVFGACSL 609
Query: 294 YFDIMPFKDMAAWS-------------AMITAYVDEKLLGEALELFNLVPEKNVGIWNTI 340
+ ++ A++ ++I Y + ++ ++FN + EK+ WN +
Sbjct: 610 LPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAM 669
Query: 341 IDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCD--GMVE--IMQAHAMVIHLG 396
I GY +G A EA++LF M R+ P T ++T+C+ G++ + M G
Sbjct: 670 IMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFG 729
Query: 397 FEQNTWVTNALITLYSKSGDLCSAMLVF--ELLKSKDVVSWTAMIVAYANHGHGHHALQV 454
+ N +I + ++G L A+ V E+ + DV W +++ + H + +V
Sbjct: 730 LKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKV 789
Query: 455 FARMVT-SGTKPDEITFVGLLSA 476
A++ KP+ + L A
Sbjct: 790 AAKLFELEPEKPENYVLLSNLYA 812
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 281 bits (720), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 187/633 (29%), Positives = 307/633 (48%), Gaps = 73/633 (11%)
Query: 74 ARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSE------------------- 114
AR+LFD MP+R+ +S+NS+I+ Y + A +F E
Sbjct: 101 ARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGE 160
Query: 115 --------------------RDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSL 154
+ V + ++D Y+K G+LD A +FD ER+ SW SL
Sbjct: 161 RCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSL 220
Query: 155 ISGYFRCGRTEEALQLFDQMSERSVVTWTT-------------MVSGFAQNGLVDHARRF 201
ISGY R G EE L L +M R + TT + GF + G+ H
Sbjct: 221 ISGYVRVGAAEEPLNLLAKM-HRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTA 279
Query: 202 FDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRV---- 257
L E + + TA++ Y NG E KLF MP +NV ++N MISG L + +
Sbjct: 280 -KLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEA 338
Query: 258 -DEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAA----WSA 308
EA LF M R + +++ ++ + K +E R+ ++ + + SA
Sbjct: 339 SSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSA 398
Query: 309 MITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPC 368
+I Y + ++ F ++++ W ++ID +V+N + A LF + S RP
Sbjct: 399 LIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPE 458
Query: 369 VTTMTSIITSCDGMVEIM---QAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFE 425
T++ ++++C + Q I G + T V + I++Y+KSG++ A VF
Sbjct: 459 EYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFI 518
Query: 426 LLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQ 485
+++ DV +++AMI + A HG + AL +F M T G KP++ F+G+L AC H GLV Q
Sbjct: 519 EVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQ 578
Query: 486 GRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVL-VALLG 544
G + F +K Y +N +H++CLVD+LGR G +++A +++ + D V ALL
Sbjct: 579 GLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLI--LSSGFQDHPVTWRALLS 636
Query: 545 ACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKI 604
+C+++ + + + ++L+ LEP +SG YVLL N Y +VR+ M+++ VKK
Sbjct: 637 SCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKE 696
Query: 605 SGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQ 637
S I + + H F V + SHP + IY L+
Sbjct: 697 PALSWIVIGNQTHSFAVADLSHPSSQMIYTMLE 729
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 105/232 (45%), Gaps = 15/232 (6%)
Query: 313 YVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTM 372
Y + LG A +LF+ +PE+N+ +N++I GY + G +A+ LF+ + + T
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 373 TSIITSCDGMVEIMQA---HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKS 429
+ C ++ H +V+ G Q ++ N LI +YSK G L AM +F+
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE 211
Query: 430 KDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACS---HAGLVNQG 486
+D VSW ++I Y G L + A+M G +L AC + G + +G
Sbjct: 212 RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKG 271
Query: 487 RRVFDSIKGAYNLNLKVEH----YSCLVDMLGRAGLVNEAMDVVSTIPPSEI 534
+ Y L +E + L+DM + G + EA+ + S +P +
Sbjct: 272 MAIH-----CYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNV 318
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 134/312 (42%), Gaps = 58/312 (18%)
Query: 43 FTASISISHDWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDV 102
+TA + + D +R + + + G LKEA KLF MP ++ V+YN+MI+ +L+ ++
Sbjct: 277 YTAKLGMEFDIVVR--TALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEI 334
Query: 103 HG-----AETIFKAMSERDVVAQ----SAMVDGYAKAGRLDNAREVF----DNMTERNAF 149
A +F M R + S ++ + A L+ R++ N + + F
Sbjct: 335 TDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEF 394
Query: 150 SWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHA----RRFFD-- 203
++LI Y G TE+ +Q F S++ + +WT+M+ QN ++ A R+ F
Sbjct: 395 IGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSH 454
Query: 204 LMPEKNTIAW---------------------------------TAMVKSYLDNGQFSEGY 230
+ PE+ T++ T+ + Y +G
Sbjct: 455 IRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLAN 514
Query: 231 KLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNK 286
++F+E+ +V +++ MIS +EA+++FE+M N ++ ++
Sbjct: 515 QVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGG 574
Query: 287 MVEVARKYFDIM 298
+V KYF M
Sbjct: 575 LVTQGLKYFQCM 586
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 177/570 (31%), Positives = 286/570 (50%), Gaps = 52/570 (9%)
Query: 138 EVFDNMTERNAFS-WTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQN---- 192
E D RNA W SL+S Y +CG+ +A++LFD+M R V++ + GF +N
Sbjct: 79 EPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETE 138
Query: 193 ------------GLVDHARRFFDL----MPE------------------KNTIAWTAMVK 218
G DHA L PE K ++
Sbjct: 139 SGFVLLKRMLGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLIT 198
Query: 219 SYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMP----DRNHVS 274
SY G G +F M RNV + +ISG + ++ + LF M N V+
Sbjct: 199 SYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVT 258
Query: 275 W-TAMVSGLAQNKMVEVARKYFDIMPF---KDMAAWSAMITAYVDEKLLGEALELFNLVP 330
+ +A+ + ++VE + + + + ++ SA++ Y + +A +F
Sbjct: 259 YLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTT 318
Query: 331 EKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSI--ITSCDGMVEI-MQ 387
E + I+ G +NG EA++ FI ML++ ++++ ++ D + + Q
Sbjct: 319 EVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQ 378
Query: 388 AHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGH 447
H++VI F NT+V N LI +YSK GDL + VF + ++ VSW +MI A+A HGH
Sbjct: 379 LHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGH 438
Query: 448 GHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYS 507
G AL+++ M T KP ++TF+ LL ACSH GL+++GR + + +K + + + EHY+
Sbjct: 439 GLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYT 498
Query: 508 CLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEP 567
C++DMLGRAGL+ EA + ++P D + ALLGAC HG+ +V ++L P
Sbjct: 499 CIIDMLGRAGLLKEAKSFIDSLPLKP-DCKIWQALLGACSFHGDTEVGEYAAEQLFQTAP 557
Query: 568 TSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHP 627
SS ++L++N Y++ +W E A+ KRMK V K +G S I+++ K H F V ++ HP
Sbjct: 558 DSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHP 617
Query: 628 QVEEIYGFLQQSLQPLMRETGYTPENSLLI 657
Q E IY L L P+M + GY P+ ++
Sbjct: 618 QAEAIYDVL-SGLFPVMVDEGYRPDKRFIL 646
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 194/448 (43%), Gaps = 61/448 (13%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAM------ 112
N +++ + GKL +A KLFDEMP RD +S N + +L+N++ + K M
Sbjct: 94 NSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGF 153
Query: 113 --SERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQL 170
+ +V + ++ +A + + + LI+ YF+CG + +
Sbjct: 154 DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVG-NKLITSYFKCGCSVSGRGV 212
Query: 171 FDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMP----EKNTIAWTAMVKSYLDNGQF 226
FD MS R+V+T T ++SG +N L + R F LM N++ + + + + + +
Sbjct: 213 FDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRI 272
Query: 227 SEGYKLFLEMPERNVRSWNVMISGCLS----ANRVDEAIHLFETMPDRNHVSWTAMVSGL 282
EG ++ + + + S + S + +++A +FE+ + + VS T ++ GL
Sbjct: 273 VEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGL 332
Query: 283 AQNKMVEVARKYFDIMPFKDMAAWSAMITA-----YVDEKL-LGEALE------------ 324
AQN E A ++F M + + +++A ++D L LG+ L
Sbjct: 333 AQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNT 392
Query: 325 ---------------------LFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRS 363
+F +P++N WN++I + R+G AL+L+ M
Sbjct: 393 FVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTL 452
Query: 364 CFRPCVTTMTSIITSCDGMVEIMQAHAMVIHL----GFEQNTWVTNALITLYSKSGDLCS 419
+P T S++ +C + I + ++ + G E T +I + ++G L
Sbjct: 453 EVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKE 512
Query: 420 AMLVFELLKSK-DVVSWTAMIVAYANHG 446
A + L K D W A++ A + HG
Sbjct: 513 AKSFIDSLPLKPDCKIWQALLGACSFHG 540
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 114/255 (44%), Gaps = 31/255 (12%)
Query: 48 SISHDWSLRKRNVEI-----TI----LGRRGKLKEARKLFDEMPQR----DAVSYNSMIA 94
SI W++ + E+ T+ L + G +EA + F M Q DA ++++
Sbjct: 306 SIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLG 365
Query: 95 VYLKNKDVHGAETIFKAMSER----DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFS 150
V + + + + + +R + + +++ Y+K G L +++ VF M +RN S
Sbjct: 366 VSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVS 425
Query: 151 WTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHARRFFDLMP 206
W S+I+ + R G AL+L+++M+ V VT+ +++ + GL+D R + M
Sbjct: 426 WNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMK 485
Query: 207 EKNTIA-----WTAMVKSYLDNGQFSEGYKLFLEMPER-NVRSWNVMISGCL--SANRVD 258
E + I +T ++ G E +P + + + W ++ C V
Sbjct: 486 EVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVG 545
Query: 259 E--AIHLFETMPDRN 271
E A LF+T PD +
Sbjct: 546 EYAAEQLFQTAPDSS 560
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 178/608 (29%), Positives = 306/608 (50%), Gaps = 59/608 (9%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDV------------HG---AE 106
+++ G G K+AR +FD++P+ D + M+ Y NK+ HG +
Sbjct: 83 VSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDD 142
Query: 107 TIF----KAMSER-------------------DVVAQSAMVDGYAKAGRLDNAREVFDNM 143
+F KA +E D V + ++D YAK G + +A +VF+++
Sbjct: 143 IVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDI 202
Query: 144 TERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVV----TWTTMVSGFAQNGLVDHAR 199
T RN WTS+I+GY + EE L LF++M E +V+ T+ T++ + + +
Sbjct: 203 TLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGK 262
Query: 200 RFFDLMP----EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSAN 255
F + E ++ T+++ Y+ G S ++F E ++ W MI G
Sbjct: 263 WFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNG 322
Query: 256 RVDEAIHLFETMP----DRNHVSWTAMVSGLAQNKMVEVARKYFDI---MPFKDMAAWSA 308
V+EA+ LF+ M N V+ +++SG + +E+ R + + D +A
Sbjct: 323 SVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANA 382
Query: 309 MITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPC 368
++ Y +A +F + EK++ WN+II G+ +NG EAL LF M P
Sbjct: 383 LVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPN 442
Query: 369 VTTMTSIITSCDGMVEIM---QAHAMVIHLGF--EQNTWVTNALITLYSKSGDLCSAMLV 423
T+ S+ ++C + + HA + LGF + V AL+ Y+K GD SA L+
Sbjct: 443 GVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLI 502
Query: 424 FELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLV 483
F+ ++ K+ ++W+AMI Y G +L++F M+ KP+E TF +LSAC H G+V
Sbjct: 503 FDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMV 562
Query: 484 NQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALL 543
N+G++ F S+ YN +HY+C+VDML RAG + +A+D++ +P + D A L
Sbjct: 563 NEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPI-QPDVRCFGAFL 621
Query: 544 GACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKK 603
C +H + + +K+L L P + YVL+SN YA++ +W++ +VR MK++ + K
Sbjct: 622 HGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSK 681
Query: 604 ISGFSQIQ 611
I+G S ++
Sbjct: 682 IAGHSTME 689
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 187/429 (43%), Gaps = 53/429 (12%)
Query: 152 TSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNG-----------LVDHARR 200
T L+S Y G T++A +FDQ+ E W M+ + N L+ H R
Sbjct: 80 TKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFR 139
Query: 201 FFDL---------------------------MPEKNTIAWTAMVKSYLDNGQFSEGYKLF 233
+ D+ +P + + T ++ Y G+ +K+F
Sbjct: 140 YDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVF 199
Query: 234 LEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVE 289
++ RNV W MI+G + + +E + LF M + N ++ ++ + +
Sbjct: 200 NDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALH 259
Query: 290 VARKYFDIMPFKDMAAWSAMITAYVDEKL----LGEALELFNLVPEKNVGIWNTIIDGYV 345
+ + + + S ++T+ +D + + A +FN ++ +W +I GY
Sbjct: 260 QGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYT 319
Query: 346 RNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQ----AHAMVIHLGFEQNT 401
NG EAL LF M +P T+ S+++ C G++E ++ H + I +G +T
Sbjct: 320 HNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC-GLIENLELGRSVHGLSIKVGI-WDT 377
Query: 402 WVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTS 461
V NAL+ +Y+K A VFE+ KD+V+W ++I ++ +G H AL +F RM +
Sbjct: 378 NVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSE 437
Query: 462 GTKPDEITFVGLLSACSHAGLVNQGRRVFD-SIKGAYNLNLKVEHYSCLVDMLGRAGLVN 520
P+ +T L SAC+ G + G + S+K + + V + L+D + G
Sbjct: 438 SVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQ 497
Query: 521 EAMDVVSTI 529
A + TI
Sbjct: 498 SARLIFDTI 506
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 128/283 (45%), Gaps = 53/283 (18%)
Query: 53 WSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAM 112
W N + + + + ++A+ +F+ ++D V++NS+I+ + +N +H A +F M
Sbjct: 375 WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM 434
Query: 113 SERDVVAQ-----------------------------------------SAMVDGYAKAG 131
+ V +A++D YAK G
Sbjct: 435 NSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCG 494
Query: 132 RLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSER----SVVTWTTMVS 187
+AR +FD + E+N +W+++I GY + G T +L+LF++M ++ + T+T+++S
Sbjct: 495 DPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILS 554
Query: 188 GFAQNGLVDHARRFFDLMPEK-----NTIAWTAMVKSYLDNGQFSEGYKLFLEMP-ERNV 241
G+V+ +++F M + +T +T MV G+ + + +MP + +V
Sbjct: 555 ACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDV 614
Query: 242 RSWNVMISGCLSANRVDEAIHLFETMPD--RNHVSWTAMVSGL 282
R + + GC +R D + + M D + S+ +VS L
Sbjct: 615 RCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNL 657
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 132/272 (48%), Gaps = 15/272 (5%)
Query: 302 DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILML 361
D++ + +++ Y +A +F+ +PE + +W ++ Y N E+ E ++L+ L++
Sbjct: 75 DISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLM 134
Query: 362 RSCFRPCVTTMTSIITSCDGMVEI---MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLC 418
+ FR + + +C + ++ + H ++ + N +T L+ +Y+K G++
Sbjct: 135 KHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLT-GLLDMYAKCGEIK 193
Query: 419 SAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACS 478
SA VF + ++VV WT+MI Y + L +F RM + +E T+ L+ AC+
Sbjct: 194 SAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACT 253
Query: 479 HAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLV----DMLGRAGLVNEAMDVVSTIPPSEI 534
++QG+ + + +E SCLV DM + G ++ A V + S +
Sbjct: 254 KLSALHQGKWFHGCL-----VKSGIELSSCLVTSLLDMYVKCGDISNARRVFN--EHSHV 306
Query: 535 DEAVLVALLGACKLHGNIKVANSIGQKLLSLE 566
D + A++ +G++ A S+ QK+ +E
Sbjct: 307 DLVMWTAMIVGYTHNGSVNEALSLFQKMKGVE 338
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 72/163 (44%), Gaps = 6/163 (3%)
Query: 367 PCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFEL 426
PC +++ C + + Q+H ++ G + + L++LY G A LVF+
Sbjct: 46 PCFL----LLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQ 101
Query: 427 LKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQG 486
+ D W M+ Y + ++++ ++ G + D+I F L AC+ ++ G
Sbjct: 102 IPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNG 161
Query: 487 RRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTI 529
+++ + + + V + L+DM + G + A V + I
Sbjct: 162 KKIHCQLVKVPSFDNVV--LTGLLDMYAKCGEIKSAHKVFNDI 202
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 278 bits (711), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 180/570 (31%), Positives = 292/570 (51%), Gaps = 38/570 (6%)
Query: 117 VVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLF----- 171
+ +++++ Y K + AR VFDNM+ER+ SW S+I+G + G EA+ LF
Sbjct: 350 LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR 409
Query: 172 -----DQMSERSVV-TWTTMVSGFAQNGLVD-HARRFFDLMPEKNTIAWTAMVKSYLDNG 224
DQ + SV+ +++ G + + V HA + ++ ++ TA++ +Y N
Sbjct: 410 CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNV---SDSFVSTALIDAYSRNR 466
Query: 225 QFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVS---------- 274
E LF E ++ +WN M++G ++ + + LF M + S
Sbjct: 467 CMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFK 525
Query: 275 WTAMVSGLAQNKMVEVARKYFDIMPFKDMAAW--SAMITAYVDEKLLGEALELFNLVPEK 332
+ + Q K V + I D+ W S ++ YV + A F+ +P
Sbjct: 526 TCGFLFAINQGKQVHA----YAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVP 581
Query: 333 NVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRP---CVTTMTSIITSCDGMVEIMQAH 389
+ W T+I G + NGE A +F M P + T+ + + + Q H
Sbjct: 582 DDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIH 641
Query: 390 AMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGH 449
A + L + +V +L+ +Y+K G + A +F+ ++ ++ +W AM+V A HG G
Sbjct: 642 ANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGK 701
Query: 450 HALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCL 509
LQ+F +M + G KPD++TF+G+LSACSH+GLV++ + S+ G Y + ++EHYSCL
Sbjct: 702 ETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCL 761
Query: 510 VDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTS 569
D LGRAGLV +A +++ ++ E ++ LL AC++ G+ + + KLL LEP
Sbjct: 762 ADALGRAGLVKQAENLIESM-SMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLD 820
Query: 570 SGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQV 629
S YVLLSN YAA +WDE R MK VKK GFS I+VK K H+F V +RS+ Q
Sbjct: 821 SSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQT 880
Query: 630 EEIYGFLQQSLQPLMRETGYTPENSL-LID 658
E IY ++ ++ + +E GY PE L+D
Sbjct: 881 ELIYRKVKDMIRDIKQE-GYVPETDFTLVD 909
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 155/604 (25%), Positives = 267/604 (44%), Gaps = 109/604 (18%)
Query: 6 GYLAFVLKTLVMKMGVCYHHRRRVFSQCQPIFRFLRNFTASISISHDWSLRKRNVEITIL 65
G+L + + + +G C H R F + RFL N N+ I++
Sbjct: 44 GFLRNAITSSDLMLGKCTHARILTFEENPE--RFLIN----------------NL-ISMY 84
Query: 66 GRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKN-----KDVHGAETIFKAMSERDVVAQ 120
+ G L AR++FD+MP RD VS+NS++A Y ++ +++ A +F+ + +DVV
Sbjct: 85 SKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRIL-RQDVVYT 143
Query: 121 SAMV----------DGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQL 170
S M GY A + + + + F +L++ Y + G+ +E L
Sbjct: 144 SRMTLSPMLKLCLHSGYVWASESFHGYACKIGL-DGDEFVAGALVNIYLKFGKVKEGKVL 202
Query: 171 FDQMSERSVVTWTTMVSGFAQNGL----VDHARRFFD--LMPEKNTIAWTA--------- 215
F++M R VV W M+ + + G +D + F L P + T+ A
Sbjct: 203 FEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDA 262
Query: 216 -MVKS----------------------YLDNGQFSEGYKLFLEMPERNVRSWNV-MISGC 251
VKS YL +GQ+S K F +M E +V V I
Sbjct: 263 GQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILML 322
Query: 252 LSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMIT 311
+A +VD ++ V A+ GL D+M + +++I
Sbjct: 323 ATAVKVD-------SLALGQQVHCMALKLGL-------------DLM----LTVSNSLIN 358
Query: 312 AYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTT 371
Y + G A +F+ + E+++ WN++I G +NG EA+ LF+ +LR +P T
Sbjct: 359 MYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYT 418
Query: 372 MTSIITSCDGMVEIM----QAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELL 427
MTS++ + + E + Q H I + +++V+ ALI YS++ + A ++FE
Sbjct: 419 MTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFE-R 477
Query: 428 KSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGR 487
+ D+V+W AM+ Y GH L++FA M G + D+ T + C +NQG+
Sbjct: 478 HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGK 537
Query: 488 RVFD-SIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGAC 546
+V +IK Y+L+L V S ++DM + G ++ A +IP D+ ++ C
Sbjct: 538 QVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIPVP--DDVAWTTMISGC 593
Query: 547 KLHG 550
+G
Sbjct: 594 IENG 597
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 278 bits (711), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 192/659 (29%), Positives = 315/659 (47%), Gaps = 61/659 (9%)
Query: 55 LRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMS- 113
L N I++LG G + A +FD+M +RD +S+NS+ A Y +N + + IF M
Sbjct: 195 LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 254
Query: 114 --------------------------------------ERDVVAQSAMVDGYAKAGRLDN 135
+ V + ++ YA AGR
Sbjct: 255 FHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVE 314
Query: 136 AREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQM--SERSV--VTWTTMVSGFAQ 191
A VF M ++ SW SL++ + GR+ +AL L M S +SV VT+T+ ++
Sbjct: 315 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 374
Query: 192 NGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVM 247
+ R L+ N I A+V Y G+ SE ++ L+MP R+V +WN +
Sbjct: 375 PDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNAL 434
Query: 248 ISGCLSANRVDEAIHLFETMP----DRNHVSWTAMVSG-LAQNKMVEVARK---YFDIMP 299
I G D+A+ F+TM N+++ +++S L ++E + Y
Sbjct: 435 IGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAG 494
Query: 300 FK-DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFI 358
F+ D +++IT Y L + +LFN + +N+ WN ++ +G E L+L
Sbjct: 495 FESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVS 554
Query: 359 LMLR---SCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSG 415
M S + + S + E Q H + + LGFE ++++ NA +YSK G
Sbjct: 555 KMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCG 614
Query: 416 DLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLS 475
++ + + ++ + SW +I A HG+ F M+ G KP +TFV LL+
Sbjct: 615 EIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLT 674
Query: 476 ACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEID 535
ACSH GLV++G +D I + L +EH C++D+LGR+G + EA +S +P +
Sbjct: 675 ACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKP-N 733
Query: 536 EAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKR 595
+ V +LL +CK+HGN+ + L LEP YVL SN +A +W++ VRK+
Sbjct: 734 DLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQ 793
Query: 596 MKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPENS 654
M KN+KK S +++K K F +G+R+HPQ EIY L+ ++ L++E+GY + S
Sbjct: 794 MGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLED-IKKLIKESGYVADTS 851
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/532 (24%), Positives = 246/532 (46%), Gaps = 71/532 (13%)
Query: 64 ILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDV-VAQSA 122
+ G G + +RK+F+EMP R+ VS+ S++ Y + I+K M V +++
Sbjct: 103 LYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENS 162
Query: 123 MVDGYAKAGRLDN---AREVFDNMTERNAFS----WTSLISGYFRCGRTEEALQLFDQMS 175
M + G L + R++ + + S SLIS G + A +FDQMS
Sbjct: 163 MSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS 222
Query: 176 ERSVVTWTTMVSGFAQNGLVDHARRFFDLM----PEKNTIA---------------W--- 213
ER ++W ++ + +AQNG ++ + R F LM E N+ W
Sbjct: 223 ERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRG 282
Query: 214 -----------------TAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANR 256
+++ Y G+ E +F +MP +++ SWN +++ ++ R
Sbjct: 283 IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGR 342
Query: 257 VDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIMP----FKDMAAWSA 308
+A+ L +M N+V++T+ ++ E R ++ F + +A
Sbjct: 343 SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA 402
Query: 309 MITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPC 368
+++ Y + E+ + +P ++V WN +I GY + + +AL F M
Sbjct: 403 LVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSN 462
Query: 369 VTTMTSIITSC----DGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVF 424
T+ S++++C D + HA ++ GFE + V N+LIT+Y+K GDL S+ +F
Sbjct: 463 YITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLF 522
Query: 425 ELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVN 484
L ++++++W AM+ A A+HGHG L++ ++M + G D+ +F LSA + ++
Sbjct: 523 NGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLE 582
Query: 485 QGRRVFDSIKGAYNLNLKVEH----YSCLVDMLGRAGLVNEAMDVVSTIPPS 532
+G+++ + L EH ++ DM + G + E VV +PPS
Sbjct: 583 EGQQLH-----GLAVKLGFEHDSFIFNAAADMYSKCGEIGE---VVKMLPPS 626
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 138/569 (24%), Positives = 235/569 (41%), Gaps = 115/569 (20%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSM------IAVYLKNKD--------------------- 101
G++K AR LFD MP R+ VS+N+M + +YL+ +
Sbjct: 6 GRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLV 65
Query: 102 ---------------VHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTER 146
VHG + K+ DV +A++ Y G + +R+VF+ M +R
Sbjct: 66 TACGRSGSMFREGVQVHG--FVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR 123
Query: 147 NAFSWTSLISGYFRCGRTEEALQLFDQMS------------------------------- 175
N SWTSL+ GY G EE + ++ M
Sbjct: 124 NVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQII 183
Query: 176 --------ERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFS 227
E + +++S G VD+A FD M E++TI+W ++ +Y NG
Sbjct: 184 GQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIE 243
Query: 228 EGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKM 287
E +++F M + + +S LS + +H W + GL
Sbjct: 244 ESFRIFSLMRRFHDEVNSTTVSTLLS------------VLGHVDHQKWGRGIHGL----- 286
Query: 288 VEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRN 347
V + FD + + + ++ Y EA +F +P K++ WN+++ +V +
Sbjct: 287 --VVKMGFDSV----VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVND 340
Query: 348 GEAGEALRLFILMLRSCFRPCVTTMTSIITSC---DGMVEIMQAHAMVIHLGFEQNTWVT 404
G + +AL L M+ S T TS + +C D + H +V+ G N +
Sbjct: 341 GRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG 400
Query: 405 NALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTK 464
NAL+++Y K G++ + V + +DVV+W A+I YA AL F M G
Sbjct: 401 NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVS 460
Query: 465 PDEITFVGLLSACSHAG-LVNQGRRVFDSIKGA-YNLNLKVEHYSCLVDMLGRAGLVNEA 522
+ IT V +LSAC G L+ +G+ + I A + + V++ L+ M + G ++ +
Sbjct: 461 SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKN--SLITMYAKCGDLSSS 518
Query: 523 MDVVSTIPPSEIDEAVLVALLGACKLHGN 551
D+ + + I A+L A HG+
Sbjct: 519 QDLFNGLDNRNI--ITWNAMLAANAHHGH 545
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 196/433 (45%), Gaps = 31/433 (7%)
Query: 127 YAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMV 186
Y K GR+ AR +FD M RN SW +++SG R G E ++ F +M + +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKP----- 56
Query: 187 SGFAQNGLVDHARRFFDLMPE--------------KNTIAWTAMVKSYLDNGQFSEGYKL 232
S F LV R + E + TA++ Y G S K+
Sbjct: 57 SSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKV 116
Query: 233 FLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMP------DRNHVSWTAMVSGLAQNK 286
F EMP+RNV SW ++ G +E I +++ M + N +S GL +++
Sbjct: 117 FEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDE 176
Query: 287 MV--EVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGY 344
+ ++ + +A +++I+ + A +F+ + E++ WN+I Y
Sbjct: 177 SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAY 236
Query: 345 VRNGEAGEALRLFILMLR---SCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNT 401
+NG E+ R+F LM R V+T+ S++ D H +V+ +GF+
Sbjct: 237 AQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV 296
Query: 402 WVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTS 461
V N L+ +Y+ +G A LVF+ + +KD++SW +++ ++ N G AL + M++S
Sbjct: 297 CVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISS 356
Query: 462 GTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNE 521
G + +TF L+AC +G R+ + L + LV M G+ G ++E
Sbjct: 357 GKSVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSE 415
Query: 522 AMDVVSTIPPSEI 534
+ V+ +P ++
Sbjct: 416 SRRVLLQMPRRDV 428
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 278 bits (711), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 173/564 (30%), Positives = 297/564 (52%), Gaps = 26/564 (4%)
Query: 96 YLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLI 155
Y+ + +HG + K + A +++V+ YAK G + A VF +ER+ F + +LI
Sbjct: 76 YVSGQQIHGF-MVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALI 133
Query: 156 SGYFRCGRTEEALQLFDQMSERSVV----TWTTMVSGFAQNGLVDHARRF---FDLMPEK 208
SG+ G +A++ + +M ++ T+ +++ G L D + F L +
Sbjct: 134 SGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVHGLAFKLGFDS 193
Query: 209 NTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRS-WNVMISGCLSANRVDEAIHLFETM 267
+ + +V SY + K+F E+P+R+ WN +++G R ++A+ +F M
Sbjct: 194 DCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKM 253
Query: 268 PDR----NHVSWTAMVSGLAQNKMVEVARKYFDIM----PFKDMAAWSAMITAYVDEKLL 319
+ + + T+++S + ++ R + D+ +A+I Y K L
Sbjct: 254 REEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWL 313
Query: 320 GEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC 379
EA +F + E+++ WN+++ + G+ L LF ML S RP + T+T+++ +C
Sbjct: 314 EEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTC 373
Query: 380 DGMVEIMQA---HAMVIHLGF----EQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDV 432
+ + Q H +I G N ++ N+L+ +Y K GDL A +VF+ ++ KD
Sbjct: 374 GRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDS 433
Query: 433 VSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDS 492
SW MI Y G AL +F+ M +G KPDEITFVGLL ACSH+G +N+GR
Sbjct: 434 ASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQ 493
Query: 493 IKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNI 552
++ YN+ +HY+C++DMLGRA + EA ++ + P + + V ++L +C+LHGN
Sbjct: 494 METVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICD-NPVVWRSILSSCRLHGNK 552
Query: 553 KVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQV 612
+A G++L LEP GGYVL+SN Y +++E VR M+++NVKK G S I +
Sbjct: 553 DLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVL 612
Query: 613 KGKNHLFFVGERSHPQVEEIYGFL 636
K H FF G ++HP+ + I+ +L
Sbjct: 613 KNGVHTFFTGNQTHPEFKSIHDWL 636
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 142/350 (40%), Gaps = 70/350 (20%)
Query: 71 LKEARKLFDEMPQR-DAVSYNSMIAVYLKNKDVHGAETIFKAMSER-------------- 115
+++A+K+FDE+P R D+V +N+++ Y + A +F M E
Sbjct: 211 VEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLS 270
Query: 116 -------------------------DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFS 150
D+V +A++D Y K+ L+ A +F+ M ER+ F+
Sbjct: 271 AFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFT 330
Query: 151 WTSLISGYFRCGRTEEALQLFDQM----SERSVVTWTTMVSGFAQNGLVDHARRFFDLM- 205
W S++ + CG + L LF++M +VT TT++ + + R M
Sbjct: 331 WNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMI 390
Query: 206 -------PEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVD 258
N +++ Y+ G + +F M ++ SWN+MI+G + +
Sbjct: 391 VSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGE 450
Query: 259 EAIHLFETM------PDRNHVSWTAMVSGLAQNKMVEVARKY-------FDIMPFKDMAA 305
A+ +F M PD +++ ++ + + + R + ++I+P D A
Sbjct: 451 LALDMFSCMCRAGVKPDE--ITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYA 508
Query: 306 WSAMITAYVDEKLLGEALELFNLVP-EKNVGIWNTIIDGYVRNGEAGEAL 354
+ D+ L EA EL P N +W +I+ +G AL
Sbjct: 509 CVIDMLGRADK--LEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLAL 556
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 130/303 (42%), Gaps = 29/303 (9%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAM----SE 114
N I + G+ L+EA +F+ M +RD ++NS++ V+ D G +F+ M
Sbjct: 301 NALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIR 360
Query: 115 RDVVAQSAMVDGYAKAGRLDNAREVFD--------NMTERNAFSWTSLISGYFRCGRTEE 166
D+V + ++ + L RE+ N N F SL+ Y +CG +
Sbjct: 361 PDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRD 420
Query: 167 ALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMP----EKNTIAWTAMVKSYLD 222
A +FD M + +W M++G+ + A F M + + I + ++++
Sbjct: 421 ARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSH 480
Query: 223 NGQFSEGYKLFLEM-------PERNVRSWNVMISGCLSANRVDEAIHLFETMP-DRNHVS 274
+G +EG +M P + + +I A++++EA L + P N V
Sbjct: 481 SGFLNEGRNFLAQMETVYNILPTSD--HYACVIDMLGRADKLEEAYELAISKPICDNPVV 538
Query: 275 WTAMVSG--LAQNK-MVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPE 331
W +++S L NK + VA K + + + M YV+ E L++ + + +
Sbjct: 539 WRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQ 598
Query: 332 KNV 334
+NV
Sbjct: 599 QNV 601
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 278 bits (711), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 189/634 (29%), Positives = 311/634 (49%), Gaps = 71/634 (11%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERD------------ 116
G L+ AR++FD+MP D VS+ S+I Y+ + A +F AM D
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 117 -----------------------------VVAQSAMVDGYAKAGRLDNAREVFDNMTERN 147
V S+++D Y + G++D + VF M RN
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 148 AFSWTSLISGYFRCGRTEEALQLFDQMS--ERSVVTWTTMVSGFAQNGL--VDHA----- 198
A +WT++I+G GR +E L F +MS E T+T ++ A GL V +
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 199 ----RRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSA 254
R F + N++A Y + G+ +G LF M ER+V SW +I
Sbjct: 234 HVIVRGFVTTLCVANSLA-----TMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRI 288
Query: 255 NRVDEAIHLFETMPDR----NHVSWTAMVSGLAQ-NKMVEVARKYFDIMPF---KDMAAW 306
+ +A+ F M + N ++ +M S A +++V + + +++ ++
Sbjct: 289 GQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVS 348
Query: 307 SAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFR 366
++M+ Y L A LF + +++ W+TII GY + G E + F M +S +
Sbjct: 349 NSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTK 408
Query: 367 PCVTTMTSIITSCDGMVEI---MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLV 423
P + S+++ M I Q HA+ + G EQN+ V ++LI +YSK G + A ++
Sbjct: 409 PTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMI 468
Query: 424 FELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLV 483
F D+VS TAMI YA HG A+ +F + + G +PD +TF+ +L+AC+H+G +
Sbjct: 469 FGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQL 528
Query: 484 NQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALL 543
+ G F+ ++ YN+ EHY C+VD+L RAG +++A +++ + + D+ V LL
Sbjct: 529 DLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKK-DDVVWTTLL 587
Query: 544 GACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKK 603
ACK G+I+ +++L L+PT + V L+N Y++ +E A VRK MK K V K
Sbjct: 588 IACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIK 647
Query: 604 ISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQ 637
G+S I++K F G+R HPQ E+IY L+
Sbjct: 648 EPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/469 (23%), Positives = 201/469 (42%), Gaps = 55/469 (11%)
Query: 149 FSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLM--- 205
F S + G A Q+FD+M +V+WT+++ + D A F M
Sbjct: 41 FDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVV 100
Query: 206 ------------------PEKNTIAW--------------------TAMVKSYLDNGQFS 227
+ + IA+ ++++ Y G+
Sbjct: 101 DHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKID 160
Query: 228 EGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWT-------AMVS 280
+ ++F EMP RN +W +I+G + A R E + F M +S T +
Sbjct: 161 KSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACA 220
Query: 281 GLAQNKMVEVARKYFDIMPF-KDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNT 339
GL Q K + + + F + +++ T Y + + + L LF + E++V W +
Sbjct: 221 GLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTS 280
Query: 340 IIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIM---QAHAMVIHLG 396
+I Y R G+ +A+ FI M S P T S+ ++C + ++ Q H V+ LG
Sbjct: 281 LIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLG 340
Query: 397 FEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFA 456
+ V+N+++ +YS G+L SA ++F+ ++ +D++SW+ +I Y G G + F+
Sbjct: 341 LNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFS 400
Query: 457 RMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRA 516
M SGTKP + LLS + ++ GR+V ++ + L S L++M +
Sbjct: 401 WMRQSGTKPTDFALASLLSVSGNMAVIEGGRQV-HALALCFGLEQNSTVRSSLINMYSKC 459
Query: 517 GLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSL 565
G + EA + +I L A++ HG K A + +K L +
Sbjct: 460 GSIKEASMIFGETDRDDI--VSLTAMINGYAEHGKSKEAIDLFEKSLKV 506
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/484 (19%), Positives = 189/484 (39%), Gaps = 99/484 (20%)
Query: 14 TLVMKMGVCYHHRRRVFSQCQPIFRFLRNFTASISISHDWSLRKRNVEITILGRRGKLKE 73
T + + C R+ + + +R F ++ +++ + T+ G++++
Sbjct: 211 TFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLA--------TMYTECGEMQD 262
Query: 74 ARKLFDEMPQRDAVSYNSMIAVY---------------LKNKDVHGAETIFKAMSER--- 115
LF+ M +RD VS+ S+I Y ++N V E F +M
Sbjct: 263 GLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACAS 322
Query: 116 ---------------------DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSL 154
+ ++M+ Y+ G L +A +F M R+ SW+++
Sbjct: 323 LSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTI 382
Query: 155 ISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHARRFFDLM----P 206
I GY + G EE + F M + +++S +++ R+ L
Sbjct: 383 IGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGL 442
Query: 207 EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFET 266
E+N+ ++++ Y G E +F E ++ S MI+G + EAI LFE
Sbjct: 443 EQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEK 502
Query: 267 ------MPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLG 320
PD V++ ++++ + +++ YF++M
Sbjct: 503 SLKVGFRPD--SVTFISVLTACTHSGQLDLGFHYFNMMQ--------------------- 539
Query: 321 EALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCD 380
E +N+ P K + ++D R G +A ++ M ++ T+++ +C
Sbjct: 540 ---ETYNMRPAKEH--YGCMVDLLCRAGRLSDAEKMINEM---SWKKDDVVWTTLLIACK 591
Query: 381 GMVEIMQAHAMVIHLGFEQNTWVTNALITL---YSKSGDLCSAMLVFELLKSKDVV---S 434
+I + + E + AL+TL YS +G+L A V + +K+K V+
Sbjct: 592 AKGDIERGRRAAERI-LELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPG 650
Query: 435 WTAM 438
W+++
Sbjct: 651 WSSI 654
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 278 bits (711), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 161/451 (35%), Positives = 249/451 (55%), Gaps = 8/451 (1%)
Query: 195 VDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSA 254
VD+A F + N +TAM+ ++ +G+ ++G L+ M +V N +I+ L A
Sbjct: 77 VDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKA 136
Query: 255 N--RVDEAIH--LFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMI 310
+V IH + + + M+ ++ + A+K FD MP +D A + MI
Sbjct: 137 CDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMI 196
Query: 311 TAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVT 370
Y + + EALELF V K+ W +IDG VRN E +AL LF M
Sbjct: 197 NCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEF 256
Query: 371 TMTSIITSCD--GMVEIMQ-AHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELL 427
T ++++C G +E+ + H+ V + E + +V NALI +YS+ GD+ A VF ++
Sbjct: 257 TAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVM 316
Query: 428 KSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGR 487
+ KDV+S+ MI A HG A+ F MV G +P+++T V LL+ACSH GL++ G
Sbjct: 317 RDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGL 376
Query: 488 RVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACK 547
VF+S+K +N+ ++EHY C+VD+LGR G + EA + IP E D +L LL ACK
Sbjct: 377 EVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPI-EPDHIMLGTLLSACK 435
Query: 548 LHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGF 607
+HGN+++ I ++L E SG YVLLSN YA+ +W E ++R+ M++ ++K G
Sbjct: 436 IHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGC 495
Query: 608 SQIQVKGKNHLFFVGERSHPQVEEIYGFLQQ 638
S I+V + H F VG+ +HP E IY LQ+
Sbjct: 496 STIEVDNQIHEFLVGDIAHPHKEAIYQRLQE 526
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/442 (21%), Positives = 193/442 (43%), Gaps = 26/442 (5%)
Query: 76 KLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDN 135
K+ +DA +I V V A +F +S +V +AM+DG+ +GR +
Sbjct: 51 KIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSAD 110
Query: 136 AREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQM------SERSVVTWTTMVSGF 189
++ M + +I+ + + ++ Q+ S RSV M+ +
Sbjct: 111 GVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHAQVLKLGFGSSRSV--GLKMMEIY 168
Query: 190 AQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMIS 249
++G + +A++ FD MP+++ +A T M+ Y + G E +LF ++ ++ W MI
Sbjct: 169 GKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMID 228
Query: 250 GCLSANRVDEAIHLFETMP----DRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMA- 304
G + +++A+ LF M N + ++S + +E+ R + + M
Sbjct: 229 GLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMEL 288
Query: 305 ---AWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILML 361
+A+I Y + EA +F ++ +K+V +NT+I G +G + EA+ F M+
Sbjct: 289 SNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMV 348
Query: 362 RSCFRPCVTTMTSIITSC------DGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSG 415
FRP T+ +++ +C D +E+ + V ++ E ++ L + G
Sbjct: 349 NRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNV--EPQIEHYGCIVDLLGRVG 406
Query: 416 DLCSAMLVFELLK-SKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLL 474
L A E + D + ++ A HG+ ++ R+ S PD T+V L
Sbjct: 407 RLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFES-ENPDSGTYVLLS 465
Query: 475 SACSHAGLVNQGRRVFDSIKGA 496
+ + +G + + +S++ +
Sbjct: 466 NLYASSGKWKESTEIRESMRDS 487
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 143/312 (45%), Gaps = 25/312 (8%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAM------SERDVVAQSA 122
G+ + L+ M + N +I LK D+ I + S R V +
Sbjct: 106 GRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHAQVLKLGFGSSRSVGLK-- 163
Query: 123 MVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTW 182
M++ Y K+G L NA+++FD M +R+ + T +I+ Y CG +EAL+LF + + V W
Sbjct: 164 MMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCW 223
Query: 183 TTMVSGFAQNGLVDHARRFFDLMPEKNTIA--WTA--MVKSYLDNGQFSEG--YKLFLEM 236
T M+ G +N ++ A F M +N A +TA ++ + D G G F+E
Sbjct: 224 TAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVEN 283
Query: 237 PERNVRSW--NVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLA-QNKMVEVARK 293
+ ++ N +I+ ++EA +F M D++ +S+ M+SGLA VE +
Sbjct: 284 QRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINE 343
Query: 294 YFDIM--PFK-DMAAWSAMITAYVDEKLLGEALELFNLVP-----EKNVGIWNTIIDGYV 345
+ D++ F+ + A++ A LL LE+FN + E + + I+D
Sbjct: 344 FRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLG 403
Query: 346 RNGEAGEALRLF 357
R G EA R
Sbjct: 404 RVGRLEEAYRFI 415
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 119/279 (42%), Gaps = 49/279 (17%)
Query: 64 ILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAM 123
I G+ G+L A+K+FDEMP RD V+ MI Y + + A +F+ + +D V +AM
Sbjct: 167 IYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAM 226
Query: 124 VDGYAKAGRLDNAREVFDNMTERNA----------------------------------- 148
+DG + ++ A E+F M N
Sbjct: 227 IDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRM 286
Query: 149 ----FSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGL-VDHARRFFD 203
F +LI+ Y RCG EA ++F M ++ V+++ TM+SG A +G V+ F D
Sbjct: 287 ELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRD 346
Query: 204 LMP---EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMP-----ERNVRSWNVMISGCLSAN 255
++ N + A++ + G G ++F M E + + ++
Sbjct: 347 MVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVG 406
Query: 256 RVDEAIHLFETMP-DRNHVSWTAMVSGLAQNKMVEVARK 293
R++EA E +P + +H+ ++S + +E+ K
Sbjct: 407 RLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEK 445
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 115/260 (44%), Gaps = 32/260 (12%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGA--ETI--FKAMSE 114
N I + R G + EAR++F M +D +SYN+MI+ +HGA E I F+ M
Sbjct: 294 NALINMYSRCGDINEARRVFRVMRDKDVISYNTMIS----GLAMHGASVEAINEFRDMVN 349
Query: 115 R----DVVAQSAMVDGYAKAGRLDNAREVFDNM-----TERNAFSWTSLISGYFRCGRTE 165
R + V A+++ + G LD EVF++M E + ++ R GR E
Sbjct: 350 RGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLE 409
Query: 166 EALQLFDQMS-ERSVVTWTTMVSGFAQNGLVDH----ARRFFDLM-PEKNTIAWTAMVKS 219
EA + + + E + T++S +G ++ A+R F+ P+ T + +
Sbjct: 410 EAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGT--YVLLSNL 467
Query: 220 YLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMV 279
Y +G++ E ++ M + + GC S VD IH F + D H A+
Sbjct: 468 YASSGKWKESTEIRESMRDSGIEKE----PGC-STIEVDNQIHEF-LVGDIAHPHKEAIY 521
Query: 280 SGLAQ-NKMVEVARKYFDIM 298
L + N+++ DI+
Sbjct: 522 QRLQELNRILRFKENQIDII 541
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%)
Query: 371 TMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSK 430
T+ S++ SC + + HA +I +Q+ +V LI + S + A VF + +
Sbjct: 31 TLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNP 90
Query: 431 DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSAC 477
+V +TAMI + + G + ++ RM+ + PD +L AC
Sbjct: 91 NVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC 137
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 192/659 (29%), Positives = 316/659 (47%), Gaps = 61/659 (9%)
Query: 55 LRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMS- 113
L N I++LG G + A +FD+M +RD +S+NS+ A Y +N + + IF M
Sbjct: 178 LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 237
Query: 114 --------------------------------------ERDVVAQSAMVDGYAKAGRLDN 135
+ V + ++ YA AGR
Sbjct: 238 FHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVE 297
Query: 136 AREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQM--SERSV--VTWTTMVSGFAQ 191
A VF M ++ SW SL++ + GR+ +AL L M S +SV VT+T+ ++
Sbjct: 298 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 357
Query: 192 NGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVM 247
+ R L+ N I A+V Y G+ SE ++ L+MP R+V +WN +
Sbjct: 358 PDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNAL 417
Query: 248 ISGCLSANRVDEAIHLFETMP----DRNHVSWTAMVSG-LAQNKMVEVARK---YFDIMP 299
I G D+A+ F+TM N+++ +++S L ++E + Y
Sbjct: 418 IGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAG 477
Query: 300 FK-DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFI 358
F+ D +++IT Y L + +LFN + +N+ WN ++ +G E L+L
Sbjct: 478 FESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVS 537
Query: 359 LMLR---SCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSG 415
M S + + S + E Q H + + LGFE ++++ NA +YSK G
Sbjct: 538 KMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCG 597
Query: 416 DLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLS 475
++ + + ++ + SW +I A HG+ F M+ G KP +TFV LL+
Sbjct: 598 EIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLT 657
Query: 476 ACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEID 535
ACSH GLV++G +D I + L +EH C++D+LGR+G + EA +S + P + +
Sbjct: 658 ACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKM-PMKPN 716
Query: 536 EAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKR 595
+ V +LL +CK+HGN+ + L LEP YVL SN +A +W++ VRK+
Sbjct: 717 DLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQ 776
Query: 596 MKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPENS 654
M KN+KK S +++K K F +G+R+HPQ EIY L+ ++ L++E+GY + S
Sbjct: 777 MGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLED-IKKLIKESGYVADTS 834
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 132/532 (24%), Positives = 246/532 (46%), Gaps = 71/532 (13%)
Query: 64 ILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDV-VAQSA 122
+ G G + +RK+F+EMP R+ VS+ S++ Y + I+K M V +++
Sbjct: 86 LYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENS 145
Query: 123 MVDGYAKAGRLDN---AREVFDNMTERNAFS----WTSLISGYFRCGRTEEALQLFDQMS 175
M + G L + R++ + + S SLIS G + A +FDQMS
Sbjct: 146 MSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS 205
Query: 176 ERSVVTWTTMVSGFAQNGLVDHARRFFDLM----PEKNTIA---------------W--- 213
ER ++W ++ + +AQNG ++ + R F LM E N+ W
Sbjct: 206 ERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRG 265
Query: 214 -----------------TAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANR 256
+++ Y G+ E +F +MP +++ SWN +++ ++ R
Sbjct: 266 IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGR 325
Query: 257 VDEAIHLFETM----PDRNHVSWTAMVSGLAQNKMVEVARKYFDIMP----FKDMAAWSA 308
+A+ L +M N+V++T+ ++ E R ++ F + +A
Sbjct: 326 SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA 385
Query: 309 MITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPC 368
+++ Y + E+ + +P ++V WN +I GY + + +AL F M
Sbjct: 386 LVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSN 445
Query: 369 VTTMTSIITSC----DGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVF 424
T+ S++++C D + HA ++ GFE + V N+LIT+Y+K GDL S+ +F
Sbjct: 446 YITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLF 505
Query: 425 ELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVN 484
L ++++++W AM+ A A+HGHG L++ ++M + G D+ +F LSA + ++
Sbjct: 506 NGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLE 565
Query: 485 QGRRVFDSIKGAYNLNLKVEH----YSCLVDMLGRAGLVNEAMDVVSTIPPS 532
+G+++ + L EH ++ DM + G + E VV +PPS
Sbjct: 566 EGQQLH-----GLAVKLGFEHDSFIFNAAADMYSKCGEIGE---VVKMLPPS 609
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 122/502 (24%), Positives = 214/502 (42%), Gaps = 73/502 (14%)
Query: 94 AVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTS 153
+++ + VHG + K+ DV +A++ Y G + +R+VF+ M +RN SWTS
Sbjct: 56 SMFREGVQVHG--FVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTS 113
Query: 154 LISGYFRCGRTEEALQLFDQMS-------------------------------------- 175
L+ GY G EE + ++ M
Sbjct: 114 LMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSG 173
Query: 176 -ERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFL 234
E + +++S G VD+A FD M E++TI+W ++ +Y NG E +++F
Sbjct: 174 LESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFS 233
Query: 235 EMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKY 294
M + + +S LS + +H W + GL V +
Sbjct: 234 LMRRFHDEVNSTTVSTLLS------------VLGHVDHQKWGRGIHGL-------VVKMG 274
Query: 295 FDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEAL 354
FD + + + ++ Y EA +F +P K++ WN+++ +V +G + +AL
Sbjct: 275 FDSV----VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDAL 330
Query: 355 RLFILMLRSCFRPCVTTMTSIITSC---DGMVEIMQAHAMVIHLGFEQNTWVTNALITLY 411
L M+ S T TS + +C D + H +V+ G N + NAL+++Y
Sbjct: 331 GLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMY 390
Query: 412 SKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFV 471
K G++ + V + +DVV+W A+I YA AL F M G + IT V
Sbjct: 391 GKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVV 450
Query: 472 GLLSACSHAG-LVNQGRRVFDSIKGA-YNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTI 529
+LSAC G L+ +G+ + I A + + V++ L+ M + G ++ + D+ + +
Sbjct: 451 SVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKN--SLITMYAKCGDLSSSQDLFNGL 508
Query: 530 PPSEIDEAVLVALLGACKLHGN 551
I A+L A HG+
Sbjct: 509 DNRNI--ITWNAMLAANAHHGH 528
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 186/417 (44%), Gaps = 31/417 (7%)
Query: 143 MTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFF 202
M RN SW +++SG R G E ++ F +M + + S F LV R
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKP-----SSFVIASLVTACGRSG 55
Query: 203 DLMPE--------------KNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMI 248
+ E + TA++ Y G S K+F EMP+RNV SW ++
Sbjct: 56 SMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLM 115
Query: 249 SGCLSANRVDEAIHLFETMP------DRNHVSWTAMVSGLAQNKMV--EVARKYFDIMPF 300
G +E I +++ M + N +S GL +++ + ++ +
Sbjct: 116 VGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLE 175
Query: 301 KDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILM 360
+A +++I+ + A +F+ + E++ WN+I Y +NG E+ R+F LM
Sbjct: 176 SKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLM 235
Query: 361 LR---SCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDL 417
R V+T+ S++ D H +V+ +GF+ V N L+ +Y+ +G
Sbjct: 236 RRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRS 295
Query: 418 CSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSAC 477
A LVF+ + +KD++SW +++ ++ N G AL + M++SG + +TF L+AC
Sbjct: 296 VEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC 355
Query: 478 SHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEI 534
+G R+ + L + LV M G+ G ++E+ V+ +P ++
Sbjct: 356 FTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDV 411
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 177/517 (34%), Positives = 266/517 (51%), Gaps = 50/517 (9%)
Query: 185 MVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVR-- 242
++ +A V AR+ FD +PE+N I M++SY++NG + EG K+F M NVR
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 243 --SWNVMISGCL-------------SANRV----------------------DEAIHLFE 265
++ ++ C SA +V EA + +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 266 TMPDRNHVSWTAMVSGLAQNK----MVEVARKYFDIMPFKDMAAWSAMITAYVDEKL--L 319
M R+ VSW ++V G AQN+ +EV R+ + D ++++ A + +
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 320 GEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC 379
++F + +K++ WN +I Y++N EA+ L+ M F P ++TS++ +C
Sbjct: 260 MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319
Query: 380 DGMVEI---MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWT 436
+ + H + N + NALI +Y+K G L A VFE +KS+DVVSWT
Sbjct: 320 GDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWT 379
Query: 437 AMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGA 496
AMI AY G G A+ +F+++ SG PD I FV L+ACSHAGL+ +GR F +
Sbjct: 380 AMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDH 439
Query: 497 YNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVAN 556
Y + ++EH +C+VD+LGRAG V EA + + E +E V ALLGAC++H + +
Sbjct: 440 YKITPRLEHLACMVDLLGRAGKVKEAYRFIQDM-SMEPNERVWGALLGACRVHSDTDIGL 498
Query: 557 SIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKN 616
KL L P SG YVLLSN YA +W+E +R MK K +KK G S ++V
Sbjct: 499 LAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRII 558
Query: 617 HLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPEN 653
H F VG+RSHPQ +EIY L L M+E GY P++
Sbjct: 559 HTFLVGDRSHPQSDEIYREL-DVLVKKMKELGYVPDS 594
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 152/337 (45%), Gaps = 28/337 (8%)
Query: 74 ARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQ----SAMVDGYAK 129
ARK+FDE+P+R+ + N MI Y+ N +F M +V ++ +
Sbjct: 93 ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSC 152
Query: 130 AGRLDNAREVFDNMTE----RNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTM 185
+G + R++ + T+ F L+S Y +CG EA + D+MS R VV+W ++
Sbjct: 153 SGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSL 212
Query: 186 VSGFAQNGLVDHARRFFDLMP------EKNTIA--WTAMVKSYLDNGQFSEGYKLFLEMP 237
V G+AQN D A M + T+A A+ + +N + + +F +M
Sbjct: 213 VVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVK--DMFFKMG 270
Query: 238 ERNVRSWNVMISGCLSANRVDEAIHLFETMP----DRNHVSWTAMVSGLAQNKMVEVARK 293
++++ SWNVMI + EA+ L+ M + + VS T+++ + + +K
Sbjct: 271 KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKK 330
Query: 294 YFDIMPFK----DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGE 349
+ K ++ +A+I Y L +A ++F + ++V W +I Y +G
Sbjct: 331 IHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGR 390
Query: 350 AGEALRLFILMLRSCFRPCVTTMTSIITSCD--GMVE 384
+A+ LF + S P + + +C G++E
Sbjct: 391 GCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLE 427
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 109/250 (43%), Gaps = 53/250 (21%)
Query: 75 RKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMS----ERDVVA----------- 119
+ +F +M ++ VS+N MI VY+KN A ++ M E D V+
Sbjct: 263 KDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDT 322
Query: 120 ------------------------QSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLI 155
++A++D YAK G L+ AR+VF+NM R+ SWT++I
Sbjct: 323 SALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMI 382
Query: 156 SGYFRCGRTEEALQLFDQMSERSVV----TWTTMVSGFAQNGLVDHARRFFDLMPEKNTI 211
S Y GR +A+ LF ++ + +V + T ++ + GL++ R F LM + I
Sbjct: 383 SAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKI 442
Query: 212 A-----WTAMVKSYLDNGQFSEGYKLFLEMP-ERNVRSWNVMISGCLSANRVD----EAI 261
MV G+ E Y+ +M E N R W ++ C + D A
Sbjct: 443 TPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAAD 502
Query: 262 HLFETMPDRN 271
LF+ P+++
Sbjct: 503 KLFQLAPEQS 512
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 114/255 (44%), Gaps = 18/255 (7%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQS 121
+++ G+ G L EAR + DEM +RD VS+NS++ Y +N+ A + + M + +
Sbjct: 182 VSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDA 241
Query: 122 AMVDGYAKA---GRLDN---AREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMS 175
+ A +N +++F M +++ SW +I Y + EA++L+ +M
Sbjct: 242 GTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRME 301
Query: 176 ----ERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFS 227
E V+ T+++ + ++ + K N + A++ Y G
Sbjct: 302 ADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLE 361
Query: 228 EGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLA 283
+ +F M R+V SW MIS + R +A+ LF + D + +++ ++ +
Sbjct: 362 KARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACS 421
Query: 284 QNKMVEVARKYFDIM 298
++E R F +M
Sbjct: 422 HAGLLEEGRSCFKLM 436
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 161/369 (43%), Gaps = 34/369 (9%)
Query: 90 NSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNM----TE 145
N ++++Y K + A + MS RDVV+ +++V GYA+ R D+A EV M
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 146 RNAFSWTSLISGYFRCGRTEEAL---QLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFF 202
+A + SL+ TE + +F +M ++S+V+W M+ + +N + A +
Sbjct: 239 HDAGTMASLLPAVSNT-TTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELY 297
Query: 203 DLMP----EKNTIAWTAMVKSYLDNGQFSEGYKL--FLEMPE--RNVRSWNVMISGCLSA 254
M E + ++ T+++ + D S G K+ ++E + N+ N +I
Sbjct: 298 SRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKC 357
Query: 255 NRVDEAIHLFETMPDRNHVSWTAMVS--GLAQNKMVEVA--RKYFDIMPFKDMAAWSAMI 310
+++A +FE M R+ VSWTAM+S G + VA K D D A+ +
Sbjct: 358 GCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTL 417
Query: 311 TAYVDEKLLGEALELFNLVPE-----KNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCF 365
A LL E F L+ + + ++D R G+ EA R M
Sbjct: 418 AACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDM---SM 474
Query: 366 RPCVTTMTSIITSC----DGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAM 421
P +++ +C D + ++ A + L EQ+ + L +Y+K+G
Sbjct: 475 EPNERVWGALLGACRVHSDTDIGLLAADKL-FQLAPEQSGYYV-LLSNIYAKAGRWEEVT 532
Query: 422 LVFELLKSK 430
+ ++KSK
Sbjct: 533 NIRNIMKSK 541
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 5/136 (3%)
Query: 389 HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHG 448
H+ +I N+ + L+ Y+ D+ SA VF+ + ++V+ MI +Y N+G
Sbjct: 62 HSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFY 121
Query: 449 HHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHY-- 506
++VF M +PD TF +L ACS +G + GR++ S A + L +
Sbjct: 122 GEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGS---ATKVGLSSTLFVG 178
Query: 507 SCLVDMLGRAGLVNEA 522
+ LV M G+ G ++EA
Sbjct: 179 NGLVSMYGKCGFLSEA 194
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 201/657 (30%), Positives = 337/657 (51%), Gaps = 51/657 (7%)
Query: 36 IFRFLRNFTASISISHDWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAV---SYNSM 92
IF+ L T + SIS+D+S I+ILG + ++L + R ++
Sbjct: 17 IFKALLMSTITESISNDYSRF-----ISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKK 71
Query: 93 IAVYLKNK---DVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTER--- 146
+ V+ ++ V A +F + E DVV + M+ G++K ++ NM +
Sbjct: 72 LFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVT 131
Query: 147 -NAFSWTSLISGYFR------CGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHAR 199
++ ++ L++G R CG+ + + V +V ++ GL+D AR
Sbjct: 132 PDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQ-NALVKMYSLCGLMDMAR 190
Query: 200 RFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWN-----VMISGCLS- 253
FD +++ +W M+ Y ++ E +L +EM ERN+ S +++S C
Sbjct: 191 GVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEM-ERNLVSPTSVTLLLVLSACSKV 249
Query: 254 -----ANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSA 308
RV E + +T P + A+V+ A +++A + F M +D+ +W++
Sbjct: 250 KDKDLCKRVHEYVSECKTEPSLRLEN--ALVNAYAACGEMDIAVRIFRSMKARDVISWTS 307
Query: 309 MITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPC 368
++ YV+ L A F+ +P ++ W +IDGY+R G E+L +F M + P
Sbjct: 308 IVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPD 367
Query: 369 VTTMTSIITSCD--GMVEIMQAHAMVIHLG-FEQNTWVTNALITLYSKSGDLCSAMLVFE 425
TM S++T+C G +EI + I + + V NALI +Y K G A VF
Sbjct: 368 EFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFH 427
Query: 426 LLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQ 485
+ +D +WTAM+V AN+G G A++VF +M +PD+IT++G+LSAC+H+G+V+Q
Sbjct: 428 DMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQ 487
Query: 486 GRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIP--PSEIDEAVLVALL 543
R+ F ++ + + + HY C+VDMLGRAGLV EA +++ +P P+ I V ALL
Sbjct: 488 ARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSI---VWGALL 544
Query: 544 GACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKK 603
GA +LH + +A +K+L LEP + Y LL N YA ++W + +VR+++ + +KK
Sbjct: 545 GASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKK 604
Query: 604 ISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRET---GYTPENSLLI 657
GFS I+V G H F G++SH Q EEIY L+ L +E+ Y P+ S L+
Sbjct: 605 TPGFSLIEVNGFAHEFVAGDKSHLQSEEIY----MKLEELAQESTFAAYLPDTSELL 657
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 292/545 (53%), Gaps = 47/545 (8%)
Query: 121 SAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFD--QMSERS 178
+ ++ + G + AR+VFD++ F W ++I GY R ++AL ++ Q++ S
Sbjct: 57 TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS 116
Query: 179 VVTWT-----TMVSGFA--QNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYK 231
++T SG + Q G HA+ F L + + ++ Y +
Sbjct: 117 PDSFTFPHLLKACSGLSHLQMGRFVHAQ-VFRLGFDADVFVQNGLIALYAKCRRLGSART 175
Query: 232 LF--LEMPERNVRSWNVMISGCLSANRVDEAIHLFETM------PDRNHVSWTAMVS--- 280
+F L +PER + SW ++S EA+ +F M PD W A+VS
Sbjct: 176 VFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPD-----WVALVSVLN 230
Query: 281 ------GLAQNKMVE--VARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEK 332
L Q + + V + +I P D+ ++ T Y + A LF+ +
Sbjct: 231 AFTCLQDLKQGRSIHASVVKMGLEIEP--DLLI--SLNTMYAKCGQVATAKILFDKMKSP 286
Query: 333 NVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMV 392
N+ +WN +I GY +NG A EA+ +F M+ RP ++TS I++C + + QA +M
Sbjct: 287 NLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMY 346
Query: 393 IHLG---FEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGH 449
++G + + ++++ALI +++K G + A LVF+ +DVV W+AMIV Y HG
Sbjct: 347 EYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAR 406
Query: 450 HALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCL 509
A+ ++ M G P+++TF+GLL AC+H+G+V +G F+ + + +N + +HY+C+
Sbjct: 407 EAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACV 465
Query: 510 VDMLGRAGLVNEAMDVVSTIPPSEIDEAVLV--ALLGACKLHGNIKVANSIGQKLLSLEP 567
+D+LGRAG +++A +V+ +P + V V ALL ACK H ++++ Q+L S++P
Sbjct: 466 IDLLGRAGHLDQAYEVIKCMP---VQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDP 522
Query: 568 TSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHP 627
+++G YV LSN YAA WD A+VR RMKEK + K G S ++V+G+ F VG++SHP
Sbjct: 523 SNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHP 582
Query: 628 QVEEI 632
+ EEI
Sbjct: 583 RYEEI 587
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 118/496 (23%), Positives = 187/496 (37%), Gaps = 138/496 (27%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMS--------------- 113
G + AR++FD++P+ +N++I Y +N A ++ M
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 114 ------------------------ERDVVAQSAMVDGYAKAGRLDNAREVFDN--MTERN 147
+ DV Q+ ++ YAK RL +AR VF+ + ER
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT 186
Query: 148 AFSWTSLISGYFRCGRTEEALQLFDQMSERSV-VTWTTMVS------------------- 187
SWT+++S Y + G EAL++F QM + V W +VS
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246
Query: 188 -------------------GFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSE 228
+A+ G V A+ FD M N I W AM+ Y NG E
Sbjct: 247 SVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYARE 306
Query: 229 GYKLFLEMPERNVR----SWNVMISGCLSANRVDEAIHLFETMPDRNHVS----WTAMVS 280
+F EM ++VR S IS C +++A ++E + ++ +A++
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALID 366
Query: 281 GLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTI 340
A+ VE AR FD +D+ WSAMI
Sbjct: 367 MFAKCGSVEGARLVFDRTLDRDVVVWSAMIV----------------------------- 397
Query: 341 IDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCD--GMVE-------IMQAHAM 391
GY +G A EA+ L+ M R P T ++ +C+ GMV M H
Sbjct: 398 --GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHK- 454
Query: 392 VIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVS-WTAMIVAYANHGH--- 447
+ +Q + +I L ++G L A V + + + V+ W A++ A H H
Sbjct: 455 ---INPQQQHYA--CVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVEL 509
Query: 448 GHHALQVFARMVTSGT 463
G +A Q + S T
Sbjct: 510 GEYAAQQLFSIDPSNT 525
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 140/306 (45%), Gaps = 32/306 (10%)
Query: 63 TILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDV----V 118
T+ + G++ A+ LFD+M + + +N+MI+ Y KN A +F M +DV +
Sbjct: 265 TMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTI 324
Query: 119 AQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQLFDQM 174
+ ++ + A+ G L+ AR +++ + + F ++LI + +CG E A +FD+
Sbjct: 325 SITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRT 384
Query: 175 SERSVVTWTTMVSGFAQNGLVDHARRFFDLMP----EKNTIAWTAMVKSYLDNGQFSEGY 230
+R VV W+ M+ G+ +G A + M N + + ++ + +G EG+
Sbjct: 385 LDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGW 444
Query: 231 KLFLEMPERNV----RSWNVMISGCLSANRVDEAIHLFETMPDRNHVS-WTAMVSGLAQN 285
F M + + + + +I A +D+A + + MP + V+ W A++S ++
Sbjct: 445 WFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504
Query: 286 KMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYV 345
+ VE + ++A +D G ++L NL +W+ + + V
Sbjct: 505 RHVE-------------LGEYAAQQLFSIDPSNTGHYVQLSNLYAAAR--LWDRVAEVRV 549
Query: 346 RNGEAG 351
R E G
Sbjct: 550 RMKEKG 555
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 21/231 (9%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRD----AVSYNSMIAVYLKNKDVHGAETIFKAMSE 114
N I+ + G +EA +F EM +D +S S I+ + + A ++++ +
Sbjct: 292 NAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGR 351
Query: 115 RD----VVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQL 170
D V SA++D +AK G ++ AR VFD +R+ W+++I GY GR EA+ L
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISL 411
Query: 171 FDQMSERSV----VTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLD---- 222
+ M V VT+ ++ +G+V FF+ M + +D
Sbjct: 412 YRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGR 471
Query: 223 NGQFSEGYKLFLEMP-ERNVRSWNVMISGCLSANRVD----EAIHLFETMP 268
G + Y++ MP + V W ++S C V+ A LF P
Sbjct: 472 AGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDP 522
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%)
Query: 373 TSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDV 432
S+I S ++ Q HA ++ LG + + ++ LI S GD+ A VF+ L +
Sbjct: 25 ASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQI 84
Query: 433 VSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRV 489
W A+I Y+ + H AL +++ M + PD TF LL ACS + GR V
Sbjct: 85 FPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFV 141
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 186/650 (28%), Positives = 316/650 (48%), Gaps = 71/650 (10%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETI------------- 108
+++ G+ G L++AR++FD MP+R+ VSY S+I Y +N GAE I
Sbjct: 109 LSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNG--QGAEAIRLYLKMLQEDLVP 166
Query: 109 ----------------------------FKAMSERDVVAQSAMVDGYAKAGRLDNAREVF 140
K S ++AQ+A++ Y + ++ +A VF
Sbjct: 167 DQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVF 226
Query: 141 DNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLV----- 195
+ ++ SW+S+I+G+ + G EAL +M V + G +
Sbjct: 227 YGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRP 286
Query: 196 DHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGC 251
D+ + L + N IA ++ Y G + ++F ++ + SWNV+I+G
Sbjct: 287 DYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGL 346
Query: 252 LSANRVDEAIHLFETM------PDRNHVS--WTAMVSGLAQNKMVEVARKYFDIMPFKDM 303
+ DEA+ +F M PD + A +A ++ +++ D+
Sbjct: 347 ANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADL 406
Query: 304 AAWSAMITAYVDEKLLGEALELF-NLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLR 362
++++T Y L LF + + WNTI+ +++ + E LRLF LML
Sbjct: 407 TVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLV 466
Query: 363 SCFRPCVTTMTSIITSCDGMVEIM------QAHAMVIHLGFEQNTWVTNALITLYSKSGD 416
S P TM +++ C VEI Q H + G ++ N LI +Y+K G
Sbjct: 467 SECEPDHITMGNLLRGC---VEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGS 523
Query: 417 LCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSA 476
L A +F+ + ++DVVSW+ +IV YA G G AL +F M ++G +P+ +TFVG+L+A
Sbjct: 524 LGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTA 583
Query: 477 CSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDE 536
CSH GLV +G +++ +++ + ++ EH SC+VD+L RAG +NEA + + E D
Sbjct: 584 CSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKL-EPDV 642
Query: 537 AVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRM 596
V LL ACK GN+ +A + +L ++P +S +VLL + +A+ W+ A +R M
Sbjct: 643 VVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSM 702
Query: 597 KEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRE 646
K+ +VKKI G S I+++ K H+FF + HP+ ++IY L ++ E
Sbjct: 703 KKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQMLDE 752
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 134/557 (24%), Positives = 239/557 (42%), Gaps = 76/557 (13%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAV-----SYNSMIAV------YLKNKDVHGAET 107
N I L + +EA + FD + + +Y S+I + + +H +
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIH--DH 92
Query: 108 IFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEA 167
I + + D + + ++ Y K G L +AREVFD M ERN S+TS+I+GY + G+ EA
Sbjct: 93 ILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEA 152
Query: 168 LQLFDQMSERSVV----TWTTMVSGFAQNGLVDHARRF----FDLMPEKNTIAWTAMVKS 219
++L+ +M + +V + +++ A + V ++ L + IA A++
Sbjct: 153 IRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAM 212
Query: 220 YLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAI-HLFETMP----DRNHVS 274
Y+ Q S+ ++F +P +++ SW+ +I+G EA+ HL E + N
Sbjct: 213 YVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYI 272
Query: 275 WTAMVSGLAQNKMVEVARKYFDIMPFKDMA----AWSAMITAYVDEKLLGEALELFNLVP 330
+ + + + + + + ++A A ++ Y L A +F+ +
Sbjct: 273 FGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE 332
Query: 331 EKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSII---TSCDGMVEIMQ 387
+ WN II G NG A EA+ +F M S F P ++ S++ T + + MQ
Sbjct: 333 RPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQ 392
Query: 388 AHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSK-DVVSWTAMIVAYANHG 446
H+ +I GF + V N+L+T+Y+ DL +FE ++ D VSW ++ A H
Sbjct: 393 IHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHE 452
Query: 447 HGHHALQVFARMVTSGTKPDEITFVGLLSAC----------------------------- 477
L++F M+ S +PD IT LL C
Sbjct: 453 QPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKN 512
Query: 478 ------SHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPP 531
+ G + Q RR+FDS+ N V +S L+ ++G EA+ + +
Sbjct: 513 GLIDMYAKCGSLGQARRIFDSMD-----NRDVVSWSTLIVGYAQSGFGEEALILFKEMKS 567
Query: 532 S--EIDEAVLVALLGAC 546
+ E + V +L AC
Sbjct: 568 AGIEPNHVTFVGVLTAC 584
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 83/158 (52%), Gaps = 4/158 (2%)
Query: 336 IWNTIIDGYVRNGEAGEALRLFILMLR-SCFRPCVTTMTSIITSCDGMVEIMQA---HAM 391
+ N I+ ++ EAL F + S F+ + T S+I +C + Q H
Sbjct: 33 LMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDH 92
Query: 392 VIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHA 451
+++ + +T + N ++++Y K G L A VF+ + +++VS+T++I Y+ +G G A
Sbjct: 93 ILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEA 152
Query: 452 LQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRV 489
++++ +M+ PD+ F ++ AC+ + V G+++
Sbjct: 153 IRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQL 190
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 107/246 (43%), Gaps = 30/246 (12%)
Query: 58 RNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMS---- 113
+N I + + G L +AR++FD M RD VS++++I Y ++ A +FK M
Sbjct: 511 KNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGI 570
Query: 114 ERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWT-----SLISGYFRCGRTEEAL 168
E + V ++ + G ++ +++ M + S T ++ R GR EA
Sbjct: 571 EPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAE 630
Query: 169 QLFDQMS-ERSVVTWTTMVSGFAQNGLVDHARR----FFDLMPEKNTIAWTAMVKSYLDN 223
+ D+M E VV W T++S G V A++ + P N+ A + + +
Sbjct: 631 RFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDP-FNSTAHVLLCSMHASS 689
Query: 224 GQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFET----MPDRN------HV 273
G + L M + +V+ I G S +++ IH+F P+R+ H
Sbjct: 690 GNWENAALLRSSMKKHDVKK----IPG-QSWIEIEDKIHIFFAEDIFHPERDDIYTVLHN 744
Query: 274 SWTAMV 279
W+ M+
Sbjct: 745 IWSQML 750
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 275 bits (703), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 189/659 (28%), Positives = 319/659 (48%), Gaps = 65/659 (9%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDV--------HGAE---- 106
N+ + + G K+A LFDEMP+R+ VS+ ++ Y + G E
Sbjct: 88 NILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHELNPH 147
Query: 107 -----------------------TIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNM 143
I K + + +A+++ Y+ G +D+AR VF+ +
Sbjct: 148 VFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGI 207
Query: 144 TERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVV----TWTTMVSGFAQNGLVDHAR 199
++ W ++S Y G E++L+L M + T+ T + G D A+
Sbjct: 208 LCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAK 267
Query: 200 RFFDLMPEKNTI----AWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSAN 255
+ + + +++ Y G S+ +K+F EMP+ +V W+ MI+
Sbjct: 268 GVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNG 327
Query: 256 RVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKY--------FDIMPFKDM 303
+EA+ LF M + N + +++++G A K + + FD+ D+
Sbjct: 328 FCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDL----DI 383
Query: 304 AAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRS 363
+A+I Y + + A++LF + KN WNT+I GY GE G+A +F LR+
Sbjct: 384 YVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRN 443
Query: 364 CFRPCVTTMTSIITSCDGMVEI---MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSA 420
T +S + +C + + +Q H + I + V+N+LI +Y+K GD+ A
Sbjct: 444 QVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFA 503
Query: 421 MLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHA 480
VF +++ DV SW A+I Y+ HG G AL++ M KP+ +TF+G+LS CS+A
Sbjct: 504 QSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNA 563
Query: 481 GLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLV 540
GL++QG+ F+S+ + + +EHY+C+V +LGR+G +++AM ++ I P E +
Sbjct: 564 GLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGI-PYEPSVMIWR 622
Query: 541 ALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKN 600
A+L A N + A +++L + P YVL+SN YA +QW A +RK MKE
Sbjct: 623 AMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMG 682
Query: 601 VKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPE-NSLLID 658
VKK G S I+ +G H F VG HP ++ I G L+ L GY P+ N++L+D
Sbjct: 683 VKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEW-LNMKATRAGYVPDRNAVLLD 740
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 200/455 (43%), Gaps = 63/455 (13%)
Query: 149 FSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEK 208
F+ L++ Y + G ++AL LFD+M ER+ V++ T+ G+A + R E
Sbjct: 85 FATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHEL 144
Query: 209 NTIAWTAMVKSY--LDNGQFSEGYKLFLEMP------ERNVRSWNVMISGCLSANRVDEA 260
N +T+ +K + LD + +L P + N +I+ VD A
Sbjct: 145 NPHVFTSFLKLFVSLDKAEICP----WLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSA 200
Query: 261 IHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIM---------------------- 298
+FE + ++ V W +VS +N E + K M
Sbjct: 201 RTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGL 260
Query: 299 ---PFKDMAAWSAMITAYVDEKLLG--------------EALELFNLVPEKNVGIWNTII 341
F + T YV + +G +A ++FN +P+ +V W+ +I
Sbjct: 261 GAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMI 320
Query: 342 DGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSI-----ITSCDGMVEIMQAHAMVIHLG 396
+ +NG EA+ LFI M + P T++SI I C G+ E Q H +V+ +G
Sbjct: 321 ARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGE--QLHGLVVKVG 378
Query: 397 FEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFA 456
F+ + +V+NALI +Y+K + +A+ +F L SK+ VSW +IV Y N G G A +F
Sbjct: 379 FDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFR 438
Query: 457 RMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFD-SIKGAYNLNLKVEHYSCLVDMLGR 515
+ + E+TF L AC+ ++ G +V +IK N KV + L+DM +
Sbjct: 439 EALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIK--TNNAKKVAVSNSLIDMYAK 496
Query: 516 AGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHG 550
G + A V + + ID A AL+ HG
Sbjct: 497 CGDIKFAQSVFNEM--ETIDVASWNALISGYSTHG 529
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 149/363 (41%), Gaps = 78/363 (21%)
Query: 47 ISISHDWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVY---------- 96
+ + D + N I + + K+ A KLF E+ ++ VS+N++I Y
Sbjct: 375 VKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAF 434
Query: 97 ------LKNK-------------------------DVHGAETIFKAMSERDVVAQSAMVD 125
L+N+ VHG K + + V ++++D
Sbjct: 435 SMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHG--LAIKTNNAKKVAVSNSLID 492
Query: 126 GYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VT 181
YAK G + A+ VF+ M + SW +LISGY G +AL++ D M +R +T
Sbjct: 493 MYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLT 552
Query: 182 WTTMVSGFAQNGLVDHARRFFDLMPEKNTIA-----WTAMVKSYLDNGQFSEGYKLFLEM 236
+ ++SG + GL+D + F+ M + I +T MV+ +GQ + KL +
Sbjct: 553 FLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGI 612
Query: 237 P-ERNVRSWNVMISGCLSAN------RVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVE 289
P E +V W M+S ++ N R E I + +V + M +G Q V
Sbjct: 613 PYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVA 672
Query: 290 VARKYFDIMPFK------------DMAAWSAMITAYVDEKLLGEALELFNL-------VP 330
RK M K D+ +S ++ + D KL+ LE N+ VP
Sbjct: 673 SIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVP 732
Query: 331 EKN 333
++N
Sbjct: 733 DRN 735
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 111/235 (47%), Gaps = 6/235 (2%)
Query: 302 DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILML 361
D+ A + ++ AYV +AL LF+ +PE+N + T+ GY G RL
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGH 142
Query: 362 RSCFRPCV-TTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSA 420
P V T+ + S D H+ ++ LG++ N +V ALI YS G + SA
Sbjct: 143 E--LNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSA 200
Query: 421 MLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHA 480
VFE + KD+V W ++ Y +G+ +L++ + M +G P+ TF L A
Sbjct: 201 RTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGL 260
Query: 481 GLVNQGRRVFDSI-KGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEI 534
G + + V I K Y L+ +V L+ + + G +++A V + +P +++
Sbjct: 261 GAFDFAKGVHGQILKTCYVLDPRVG--VGLLQLYTQLGDMSDAFKVFNEMPKNDV 313
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 275 bits (703), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 181/562 (32%), Positives = 294/562 (52%), Gaps = 32/562 (5%)
Query: 103 HGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERN-AFSWTSLISGYFRC 161
H ET + ++ V++ SA+ GYA R++FD +R+ +F S+I Y
Sbjct: 4 HAIETNVQIFTKFLVISASAVGIGYA--------RKLFDQRPQRDDSFLSNSMIKAYLET 55
Query: 162 GRTEEALQLFDQMSERSVV-----TWTTM-----VSGFAQNGLVDHAR--RFFDLMPEKN 209
+ ++ L+ + + + T+TT+ +S GL H++ RF +
Sbjct: 56 RQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFC---AD 112
Query: 210 TIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPD 269
T +V Y G+ F EMP R+ SW +ISG + +D A LF+ MP
Sbjct: 113 MYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPH 172
Query: 270 -RNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNL 328
++ V + AM+ G ++ + AR+ FD M K + W+ MI Y + K + A +LF+
Sbjct: 173 VKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDA 232
Query: 329 VPEKNVGIWNTIIDGYVRNGEAGEALRLFILM-LRSCFRPCVTTMTSIIT--SCDGMVEI 385
+PE+N+ WNT+I GY +N + E +RLF M + P T+ S++ S G + +
Sbjct: 233 MPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSL 292
Query: 386 MQ-AHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYAN 444
+ H V ++ V A++ +YSK G++ A +F+ + K V SW AMI YA
Sbjct: 293 GEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYAL 352
Query: 445 HGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVE 504
+G+ AL +F M+ KPDEIT + +++AC+H GLV +GR+ F ++ LN K+E
Sbjct: 353 NGNARAALDLFVTMMIE-EKPDEITMLAVITACNHGGLVEEGRKWFHVMR-EMGLNAKIE 410
Query: 505 HYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLS 564
HY C+VD+LGRAG + EA D+++ +P E + +L + L AC + +I+ A I +K +
Sbjct: 411 HYGCMVDLLGRAGSLKEAEDLITNMP-FEPNGIILSSFLSACGQYKDIERAERILKKAVE 469
Query: 565 LEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGER 624
LEP + G YVLL N YAA+++WD+F V+ M++ KK G S I++ F G+
Sbjct: 470 LEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDT 529
Query: 625 SHPQVEEIYGFLQQSLQPLMRE 646
+HP I+ L L + E
Sbjct: 530 THPHRRSIHLVLGDLLMHMNEE 551
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/368 (32%), Positives = 176/368 (47%), Gaps = 62/368 (16%)
Query: 74 ARKLFDEMPQR-DAVSYNSMIAVYLKNKDVHGAETIFKAMSER----------------- 115
ARKLFD+ PQR D+ NSMI YL+ + + +++ + +
Sbjct: 29 ARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSC 88
Query: 116 -----------------------DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWT 152
D+ + +VD YAK G++ AR FD M R+ SWT
Sbjct: 89 SLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWT 148
Query: 153 SLISGYFRCGRTEEALQLFDQMSE-RSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTI 211
+LISGY RCG + A +LFDQM + VV + M+ GF ++G + ARR FD M K I
Sbjct: 149 ALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVI 208
Query: 212 AWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMP--- 268
WT M+ Y + KLF MPERN+ SWN MI G + E I LF+ M
Sbjct: 209 TWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATT 268
Query: 269 --DRNHVSWTAMVSGLAQNKMVE--------VARKYFDIMPFKDMAAWSAMITAYVDEKL 318
D + V+ +++ ++ + V RK D K + +A++ Y
Sbjct: 269 SLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLD----KKVKVCTAILDMYSKCGE 324
Query: 319 LGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITS 378
+ +A +F+ +PEK V WN +I GY NG A AL LF+ M+ +P TM ++IT+
Sbjct: 325 IEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIE-EKPDEITMLAVITA 383
Query: 379 CD--GMVE 384
C+ G+VE
Sbjct: 384 CNHGGLVE 391
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 171/379 (45%), Gaps = 65/379 (17%)
Query: 8 LAFVLKTLVMKMGVCYHHRRRVFSQCQPIFRFLRNFTASISISHDWSLRKRNVEITILGR 67
F T + +C + ++ SQ I+RF F A + +S + + +
Sbjct: 79 FTFTTLTKSCSLSMCVYQGLQLHSQ---IWRF--GFCADMYVS--------TGVVDMYAK 125
Query: 68 RGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSE-RDVVAQSAMVDG 126
GK+ AR FDEMP R VS+ ++I+ Y++ ++ A +F M +DVV +AM+DG
Sbjct: 126 FGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDG 185
Query: 127 YAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMV 186
+ K+G + +AR +FD MT + +WT++I GY + A +LFD M ER++V+W TM+
Sbjct: 186 FVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMI 245
Query: 187 SGFAQNGLVDHARRFFDLM-------PEKNTI----------------AW---------- 213
G+ QN R F M P+ TI W
Sbjct: 246 GGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKL 305
Query: 214 -------TAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFET 266
TA++ Y G+ + ++F EMPE+ V SWN MI G A+ LF T
Sbjct: 306 DKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVT 365
Query: 267 M-----PDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAA----WSAMITAYVDEK 317
M PD ++ A+++ +VE RK+F +M + A + M+
Sbjct: 366 MMIEEKPD--EITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAG 423
Query: 318 LLGEALELFNLVPEKNVGI 336
L EA +L +P + GI
Sbjct: 424 SLKEAEDLITNMPFEPNGI 442
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 275 bits (702), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 183/646 (28%), Positives = 313/646 (48%), Gaps = 62/646 (9%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLK--------------------NKDVHGAETI 108
G + AR FD + RD ++N MI+ Y + D ++
Sbjct: 100 GNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSV 159
Query: 109 FKAMSER-----------------DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSW 151
KA DV ++++ Y++ + NAR +FD M R+ SW
Sbjct: 160 LKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSW 219
Query: 152 TSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVS-----GFAQNGLVDHARRFFDLMP 206
++ISGY + G +EAL L + + VT +++S G G+ H+ +
Sbjct: 220 NAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGL- 278
Query: 207 EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFET 266
E ++ Y + G+ + K+F M R++ SWN +I + AI LF+
Sbjct: 279 ESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQE 338
Query: 267 M------PDRNHVSWTAMVSGLAQNKMVEVARKY--FDIMP---FKDMAAWSAMITAYVD 315
M PD ++ ++ S L+Q + R F + +D+ +A++ Y
Sbjct: 339 MRLSRIQPD--CLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAK 396
Query: 316 EKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSC-FRPCVTTMTS 374
L+ A +FN +P +V WNTII GY +NG A EA+ ++ +M T S
Sbjct: 397 LGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVS 456
Query: 375 IITSCD---GMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKD 431
++ +C + + M+ H ++ G + +V +L +Y K G L A+ +F + +
Sbjct: 457 VLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVN 516
Query: 432 VVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFD 491
V W +I + HGHG A+ +F M+ G KPD ITFV LLSACSH+GLV++G+ F+
Sbjct: 517 SVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFE 576
Query: 492 SIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGN 551
++ Y + ++HY C+VDM GRAG + A+ + ++ + D ++ ALL AC++HGN
Sbjct: 577 MMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSL-QPDASIWGALLSACRVHGN 635
Query: 552 IKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQ 611
+ + + L +EP G +VLLSN YA+ +W+ ++R K ++K G+S ++
Sbjct: 636 VDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSME 695
Query: 612 VKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPENSLLI 657
V K +F+ G ++HP EE+Y L +LQ ++ GY P++ ++
Sbjct: 696 VDNKVEVFYTGNQTHPMYEEMYREL-TALQAKLKMIGYVPDHRFVL 740
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 188/445 (42%), Gaps = 60/445 (13%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETI---FKAMS----- 113
I + R + AR LFDEMP RD S+N+MI+ Y ++ + A T+ +AM
Sbjct: 192 IHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVV 251
Query: 114 ---------------------------ERDVVAQSAMVDGYAKAGRLDNAREVFDNMTER 146
E ++ + ++D YA+ GRL + ++VFD M R
Sbjct: 252 SLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR 311
Query: 147 NAFSWTSLISGYFRCGRTEEALQLFDQMS----ERSVVTWTTMVSGFAQNGLVDHARRF- 201
+ SW S+I Y + A+ LF +M + +T ++ S +Q G + R
Sbjct: 312 DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQ 371
Query: 202 -FDLMP----EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANR 256
F L E TI A+V Y G +F +P +V SWN +ISG
Sbjct: 372 GFTLRKGWFLEDITIG-NAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGF 430
Query: 257 VDEAIHLFETMPDR-----NHVSWTAMVSGLAQNKMVEVARKYFDIM----PFKDMAAWS 307
EAI ++ M + N +W +++ +Q + K + + D+ +
Sbjct: 431 ASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVT 490
Query: 308 AMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRP 367
++ Y L +AL LF +P N WNT+I + +G +A+ LF ML +P
Sbjct: 491 SLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKP 550
Query: 368 CVTTMTSIITSC--DGMVEIMQ--AHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAM-L 422
T +++++C G+V+ Q M G + ++ +Y ++G L +A+
Sbjct: 551 DHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKF 610
Query: 423 VFELLKSKDVVSWTAMIVAYANHGH 447
+ + D W A++ A HG+
Sbjct: 611 IKSMSLQPDASIWGALLSACRVHGN 635
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 158/338 (46%), Gaps = 17/338 (5%)
Query: 208 KNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM 267
+N +V Y G + F + R+V +WN+MISG A E I F
Sbjct: 84 QNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF 143
Query: 268 -------PD-RNHVS-WTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKL 318
PD R S A + + NK+ +A K F M D+ +++I Y K
Sbjct: 144 MLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALK-FGFM--WDVYVAASLIHLYSRYKA 200
Query: 319 LGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITS 378
+G A LF+ +P +++G WN +I GY ++G A EAL L LR+ V ++ S T
Sbjct: 201 VGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSN-GLRAMDSVTVVSLLSACTE 259
Query: 379 CDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAM 438
+ H+ I G E +V+N LI LY++ G L VF+ + +D++SW ++
Sbjct: 260 AGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSI 319
Query: 439 IVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRV--FDSIKGA 496
I AY + A+ +F M S +PD +T + L S S G + R V F KG
Sbjct: 320 IKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGW 379
Query: 497 YNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEI 534
+ ++ + + +V M + GLV+ A V + +P +++
Sbjct: 380 FLEDITIG--NAVVVMYAKLGLVDSARAVFNWLPNTDV 415
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 158/458 (34%), Positives = 259/458 (56%), Gaps = 19/458 (4%)
Query: 197 HARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEM------PERNVRSWNVMISG 250
+AR+ FD T + ++++Y + Q E L+ + P + ++ S
Sbjct: 34 YARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASA 93
Query: 251 CLSANRVDEAIH--LFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSA 308
S+ R +H F + + + T +++ A+ + AR+ FD M +D+ W+A
Sbjct: 94 SFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNA 153
Query: 309 MITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRS-CFRP 367
MIT Y + A+ELF+ +P KNV W T+I G+ +NG EAL++F+ M + +P
Sbjct: 154 MITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKP 213
Query: 368 CVTTMTSIITSCDGMVEI-----MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAML 422
T+ S++ +C + E+ ++ +A GF N +V NA I +YSK G + A
Sbjct: 214 NHITVVSVLPACANLGELEIGRRLEGYAR--ENGFFDNIYVCNATIEMYSKCGMIDVAKR 271
Query: 423 VFELL-KSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAG 481
+FE L +++ SW +MI + A HG AL +FA+M+ G KPD +TFVGLL AC H G
Sbjct: 272 LFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGG 331
Query: 482 LVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVA 541
+V +G+ +F S++ + ++ K+EHY C++D+LGR G + EA D++ T+ P + D V
Sbjct: 332 MVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTM-PMKPDAVVWGT 390
Query: 542 LLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNV 601
LLGAC HGN+++A + L LEPT+ G V++SN YAA E+WD ++RK MK++ +
Sbjct: 391 LLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETM 450
Query: 602 KKISGFSQ-IQVKGKNHLFFVGERSHPQVEEIYGFLQQ 638
K +G+S ++V H F V ++SHP+ EIY L++
Sbjct: 451 TKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEE 488
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 176/395 (44%), Gaps = 50/395 (12%)
Query: 74 ARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMS---------ERDVVAQSAMV 124
ARKLFD YN +I Y + H + ++ +S + + ++
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 125 DGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTT 184
A+ RL ++ + F + E ++F T+LI+ Y + G A ++FD+MS+R V W
Sbjct: 95 FSSARPLRLLHS-QFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNA 153
Query: 185 MVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSW 244
M++G+ + G + A FD MP KN +WT ++ + NG +SE K+FL M +
Sbjct: 154 MITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEK------ 207
Query: 245 NVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMP----F 300
D+++ NH++ +++ A +E+ R+ F
Sbjct: 208 -------------DKSV-------KPNHITVVSVLPACANLGELEIGRRLEGYARENGFF 247
Query: 301 KDMAAWSAMITAYVDEKLLGEALELF-NLVPEKNVGIWNTIIDGYVRNGEAGEALRLFIL 359
++ +A I Y ++ A LF L ++N+ WN++I +G+ EAL LF
Sbjct: 248 DNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQ 307
Query: 360 MLRSCFRPCVTTMTSIITSC--DGMV----EIMQAHAMVIHLGFEQNTWVTNALITLYSK 413
MLR +P T ++ +C GMV E+ ++ V + + + +I L +
Sbjct: 308 MLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHY--GCMIDLLGR 365
Query: 414 SGDLCSAMLVFELLKSK-DVVSWTAMIVAYANHGH 447
G L A + + + K D V W ++ A + HG+
Sbjct: 366 VGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGN 400
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 138/300 (46%), Gaps = 24/300 (8%)
Query: 109 FKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEAL 168
F++ E D + ++ YAK G L AR VFD M++R+ W ++I+GY R G + A+
Sbjct: 109 FRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAM 168
Query: 169 QLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMP-----EKNTIAWTAMVKSYLDN 223
+LFD M ++V +WTT++SGF+QNG A + F M + N I +++ + +
Sbjct: 169 ELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANL 228
Query: 224 GQFSEGYKLFLEMPER----NVRSWNVMISGCLSANRVDEAIHLFETMPD-RNHVSWTAM 278
G+ G +L E N+ N I +D A LFE + + RN SW +M
Sbjct: 229 GELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSM 288
Query: 279 VSGLAQNKMVEVARKYFDIM----PFKDMAAWSAMITAYVDEKLLGEALELFNLVPE--- 331
+ LA + + A F M D + ++ A V ++ + ELF + E
Sbjct: 289 IGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHK 348
Query: 332 --KNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCD--GMVEIMQ 387
+ + +ID R G+ EA L M +P +++ +C G VEI +
Sbjct: 349 ISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMP---MKPDAVVWGTLLGACSFHGNVEIAE 405
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 123/271 (45%), Gaps = 20/271 (7%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQS 121
IT + G L AR++FDEM +RD +N+MI Y + D+ A +F +M ++V + +
Sbjct: 124 ITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWT 183
Query: 122 AMVDGYAKAGRLDNAREVF-----DNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSE 176
++ G+++ G A ++F D + N + S++ G E +L E
Sbjct: 184 TVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARE 243
Query: 177 R----SVVTWTTMVSGFAQNGLVDHARRFF-DLMPEKNTIAWTAMVKSYLDNGQFSEGYK 231
++ + +++ G++D A+R F +L ++N +W +M+ S +G+ E
Sbjct: 244 NGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALT 303
Query: 232 LFLEMPERNVRSWNVMISG----CLSANRVDEAIHLFETMPDRNHVS-----WTAMVSGL 282
LF +M + V G C+ V + LF++M + + +S + M+ L
Sbjct: 304 LFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLL 363
Query: 283 AQNKMVEVARKYFDIMPFK-DMAAWSAMITA 312
+ ++ A MP K D W ++ A
Sbjct: 364 GRVGKLQEAYDLIKTMPMKPDAVVWGTLLGA 394
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 123/258 (47%), Gaps = 30/258 (11%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVV 118
N IT RRG +K A +LFD MP+++ S+ ++I+ + +N + A +F M + V
Sbjct: 152 NAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSV 211
Query: 119 AQS-----AMVDGYAKAGRLDNAREV---------FDNMTERNAFSWTSLISGYFRCGRT 164
+ +++ A G L+ R + FDN+ NA I Y +CG
Sbjct: 212 KPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNA-----TIEMYSKCGMI 266
Query: 165 EEALQLFDQM-SERSVVTWTTMVSGFAQNGLVDHARRFFDLM----PEKNTIAWTAMVKS 219
+ A +LF+++ ++R++ +W +M+ A +G D A F M + + + + ++ +
Sbjct: 267 DVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLA 326
Query: 220 YLDNGQFSEGYKLFLEMPERNVRSWNVMISGCL-----SANRVDEAIHLFETMPDR-NHV 273
+ G +G +LF M E + S + GC+ ++ EA L +TMP + + V
Sbjct: 327 CVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAV 386
Query: 274 SWTAMVSGLAQNKMVEVA 291
W ++ + + VE+A
Sbjct: 387 VWGTLLGACSFHGNVEIA 404
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/522 (30%), Positives = 277/522 (53%), Gaps = 29/522 (5%)
Query: 160 RCGRTEEALQLFDQMSERSVVTWTTMVSGF-------AQNGLVDHARRFFDLMPEKNTIA 212
RC + EE Q+ +M + ++ + ++ F + + +A+ FD +T
Sbjct: 23 RCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFL 82
Query: 213 WTAMVKSYLDNGQFSEGYKLFLEM----PERNVRSWNVMISGCLSANRVDEAIHLFETMP 268
W M++ + + + L+ M N ++ ++ C + + +E + +
Sbjct: 83 WNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQIT 142
Query: 269 ----DRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALE 324
+ + + ++++ A ++A FD +P D +W+++I YV + AL
Sbjct: 143 KLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALT 202
Query: 325 LFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVE 384
LF + EKN W T+I GYV+ EAL+LF M S P ++ + +++C +
Sbjct: 203 LFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGA 262
Query: 385 IMQA---HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVA 441
+ Q H+ + ++ + LI +Y+K G++ A+ VF+ +K K V +WTA+I
Sbjct: 263 LEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISG 322
Query: 442 YANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNL 501
YA HGHG A+ F M G KP+ ITF +L+ACS+ GLV +G+ +F S++ YNL
Sbjct: 323 YAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKP 382
Query: 502 KVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQK 561
+EHY C+VD+LGRAGL++EA + +P + + ALL AC++H NI++ IG+
Sbjct: 383 TIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKP-NAVIWGALLKACRIHKNIELGEEIGEI 441
Query: 562 LLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFV 621
L++++P G YV +N +A +++WD+ A+ R+ MKE+ V K+ G S I ++G H F
Sbjct: 442 LIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLA 501
Query: 622 GERSHPQVEEIYGFLQQSLQPLMR----ETGYTPE-NSLLID 658
G+RSHP++E+I QS +MR E GY PE +L+D
Sbjct: 502 GDRSHPEIEKI-----QSKWRIMRRKLEENGYVPELEEMLLD 538
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 128/304 (42%), Gaps = 55/304 (18%)
Query: 133 LDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQM------------------ 174
L A+ VFD + F W +I G+ E +L L+ +M
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKA 124
Query: 175 ---------------------SERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAW 213
E V ++++ +A G A FD +PE + ++W
Sbjct: 125 CSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSW 184
Query: 214 TAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM------ 267
+++K Y+ G+ LF +M E+N SW MISG + A+ EA+ LF M
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 268 PDR----NHVSWTAMVSGLAQNKMVEVARKYFDIMPFK-DMAAWSAMITAYVDEKLLGEA 322
PD N +S A + L Q K + Y + + D +I Y + EA
Sbjct: 245 PDNVSLANALSACAQLGALEQGKWI---HSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEA 301
Query: 323 LELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCD-- 380
LE+F + +K+V W +I GY +G EA+ F+ M + +P V T T+++T+C
Sbjct: 302 LEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYT 361
Query: 381 GMVE 384
G+VE
Sbjct: 362 GLVE 365
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 136/292 (46%), Gaps = 20/292 (6%)
Query: 83 QRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDN 142
+ D + NS+I Y + A +F + E D V+ ++++ GY KAG++D A +F
Sbjct: 147 ENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRK 206
Query: 143 MTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHA 198
M E+NA SWT++ISGY + +EALQLF +M V V+ +S AQ G ++
Sbjct: 207 MAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQG 266
Query: 199 RRFFDLMPEK----NTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSA 254
+ + + +++ ++ Y G+ E ++F + +++V++W +ISG
Sbjct: 267 KWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYH 326
Query: 255 NRVDEAIHLFETMP----DRNHVSWTAMVSGLAQNKMVEVARKYF-----DIMPFKDMAA 305
EAI F M N +++TA+++ + +VE + F D +
Sbjct: 327 GHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEH 386
Query: 306 WSAMITAYVDEKLLGEALELFNLVPEK-NVGIWNTIIDGYV--RNGEAGEAL 354
+ ++ LL EA +P K N IW ++ +N E GE +
Sbjct: 387 YGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 438
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 165/354 (46%), Gaps = 37/354 (10%)
Query: 53 WSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMI------AVYLKNKDVHGAE 106
W+L R + R L R L P +A ++ S++ + + + +H
Sbjct: 83 WNLMIRGFSCSDEPERSLLLYQRMLCSSAPH-NAYTFPSLLKACSNLSAFEETTQIHA-- 139
Query: 107 TIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEE 166
I K E DV A +++++ YA G A +FD + E + SW S+I GY + G+ +
Sbjct: 140 QITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDI 199
Query: 167 ALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMP----EKNTIAWTAMVKSYLD 222
AL LF +M+E++ ++WTTM+SG+ Q + A + F M E + ++ + +
Sbjct: 200 ALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQ 259
Query: 223 NGQFSEGYKLFLEMPERNVRSWNVMISGCL------SANRVDEAIHLFETMPDRNHVSWT 276
G +G + + + +R +V+ GC+ ++EA+ +F+ + ++ +WT
Sbjct: 260 LGALEQGKWIHSYLNKTRIRMDSVL--GCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWT 317
Query: 277 AMVSGLA-QNKMVEVARKYFDIMPF---KDMAAWSAMITA-----YVDE-KLLGEALEL- 325
A++SG A E K+ ++ ++ ++A++TA V+E KL+ ++E
Sbjct: 318 ALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERD 377
Query: 326 FNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC 379
+NL P + + I+D R G EA R M +P +++ +C
Sbjct: 378 YNLKP--TIEHYGCIVDLLGRAGLLDEAKRFIQEMP---LKPNAVIWGALLKAC 426
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 187/656 (28%), Positives = 307/656 (46%), Gaps = 111/656 (16%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSE---- 114
N + + R L +ARK+FDEM D VS+NS+I Y K A +F M+
Sbjct: 166 NALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGC 225
Query: 115 ------------------------------------RDVVAQSAMVDGYAKAGRLDNARE 138
+++ + +VD YAK G +D A
Sbjct: 226 RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANT 285
Query: 139 VFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSER----SVVTWTTMVSGFAQNGL 194
VF NM+ ++ SW ++++GY + GR E+A++LF++M E VVTW+ +SG+AQ GL
Sbjct: 286 VFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGL 345
Query: 195 VDHA----RRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISG 250
A R+ + N + +++ G G ++
Sbjct: 346 GYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH----------------- 388
Query: 251 CLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFK--DMAAWSA 308
C + + I L + ++ ++ A+ K V+ AR FD + K D+ W+
Sbjct: 389 CYA---IKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTV 445
Query: 309 MITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPC 368
MI Y +ALEL + + E++ RP
Sbjct: 446 MIGGYSQHGDANKALELLSEMFEEDCQT-----------------------------RPN 476
Query: 369 VTTMTSIITSCDGMVEI---MQAHAMVIHLGFEQNT---WVTNALITLYSKSGDLCSAML 422
T++ + +C + + Q HA L +QN +V+N LI +Y+K G + A L
Sbjct: 477 AFTISCALVACASLAALRIGKQIHAYA--LRNQQNAVPLFVSNCLIDMYAKCGSISDARL 534
Query: 423 VFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGL 482
VF+ + +K+ V+WT+++ Y HG+G AL +F M G K D +T + +L ACSH+G+
Sbjct: 535 VFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGM 594
Query: 483 VNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVAL 542
++QG F+ +K + ++ EHY+CLVD+LGRAG +N A+ ++ + P E V VA
Sbjct: 595 IDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEM-PMEPPPVVWVAF 653
Query: 543 LGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVK 602
L C++HG +++ +K+ L G Y LLSN YA +W + ++R M+ K VK
Sbjct: 654 LSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVK 713
Query: 603 KISGFSQIQ-VKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPENSLLI 657
K G S ++ +KG FFVG+++HP +EIY L +Q + ++ GY PE +
Sbjct: 714 KRPGCSWVEGIKGTT-TFFVGDKTHPHAKEIYQVLLDHMQRI-KDIGYVPETGFAL 767
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 121/508 (23%), Positives = 210/508 (41%), Gaps = 90/508 (17%)
Query: 121 SAMVDGYAKAGRLDNAREVFDNMTERNA--FSWTSLISGYFRCGRTEEALQLFDQMSERS 178
S ++ Y G L +A + +A + W SLI Y G + L LF M
Sbjct: 63 SHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS-- 120
Query: 179 VVTWT----------------------------TMVSGFAQNGLVDH------------- 197
++WT ++V+GF N V +
Sbjct: 121 -LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLS 179
Query: 198 -ARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMP-ERNVRSWNVMI------S 249
AR+ FD M + ++W ++++SY G+ ++F M E R N+ +
Sbjct: 180 DARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPC 239
Query: 250 GCLSANRVDEAIHLFETMPD--RNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWS 307
L + + + +H F + +N +V A+ M++ A F M KD+ +W+
Sbjct: 240 ASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWN 299
Query: 308 AMITAYVDEKLLGEALELFNLVPEKNVGI----WNTIIDGYVRNGEAGEALRLFILMLRS 363
AM+ Y +A+ LF + E+ + + W+ I GY + G EAL + ML S
Sbjct: 300 AMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS 359
Query: 364 CFRPCVTTMTSIITSCDGMVEIMQAHAMVIHL------------GFEQNTWVTNALITLY 411
+P T+ S+++ C + +M H IH G V N LI +Y
Sbjct: 360 GIKPNEVTLISVLSGCASVGALM--HGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMY 417
Query: 412 SKSGDLCSAMLVFELL--KSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSG--TKPDE 467
+K + +A +F+ L K +DVV+WT MI Y+ HG + AL++ + M T+P+
Sbjct: 418 AKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNA 477
Query: 468 ITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLN-----LKVEHYSCLVDMLGRAGLVNEA 522
T L AC+ + G+++ AY L + + +CL+DM + G +++A
Sbjct: 478 FTISCALVACASLAALRIGKQIH-----AYALRNQQNAVPLFVSNCLIDMYAKCGSISDA 532
Query: 523 MDVVSTIPPSEIDEAVLVALLGACKLHG 550
V + +E +L+ +HG
Sbjct: 533 RLVFDNMMAK--NEVTWTSLMTGYGMHG 558
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 188/661 (28%), Positives = 322/661 (48%), Gaps = 102/661 (15%)
Query: 90 NSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNM----TE 145
+S+I YL+ + +F + ++D V + M++GYAK G LD+ + F M
Sbjct: 177 SSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQIS 236
Query: 146 RNAFSW-----------------------------------TSLISGYFRCGRTEEALQL 170
NA ++ SL+S Y +CGR ++A +L
Sbjct: 237 PNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKL 296
Query: 171 FDQMSERSVVTWTTMVSGFAQNGLVDHARRFF------DLMPEKNTIAWTAMVKSYLDNG 224
F MS VTW M+SG+ Q+GL++ + FF ++P+ T + S +N
Sbjct: 297 FRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENL 356
Query: 225 QFSEGYKLFLEMPERNVRSWNVMISGCL-----SANRVDEAIHLFETMPDRNHVSWTAMV 279
++ + ++ R+ S ++ ++ L V A ++F + V +TAM+
Sbjct: 357 EYCKQIHCYIM---RHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMI 413
Query: 280 SGLAQNKMVEVARKYF----------------DIMPF----------KDMAAW------- 306
SG N + + + F I+P +++ +
Sbjct: 414 SGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFD 473
Query: 307 ------SAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILM 360
A+I Y + A E+F + ++++ WN++I ++ A+ +F M
Sbjct: 474 NRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQM 533
Query: 361 LRS--CFRPCVTTMTSIITSCDGMVEI---MQAHAMVIHLGFEQNTWVTNALITLYSKSG 415
S C+ CV+ +++ +++C + H +I + + + LI +Y+K G
Sbjct: 534 GVSGICYD-CVS-ISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCG 591
Query: 416 DLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMV-TSGTKPDEITFVGLL 474
+L +AM VF+ +K K++VSW ++I A NHG +L +F MV SG +PD+ITF+ ++
Sbjct: 592 NLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEII 651
Query: 475 SACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEI 534
S+C H G V++G R F S+ Y + + EHY+C+VD+ GRAG + EA + V ++P
Sbjct: 652 SSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPP- 710
Query: 535 DEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRK 594
D V LLGAC+LH N+++A KL+ L+P++SG YVL+SNA+A +W+ +VR
Sbjct: 711 DAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRS 770
Query: 595 RMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPENS 654
MKE+ V+KI G+S I++ + HLF G+ +HP+ IY L L L R GY P+
Sbjct: 771 LMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGEL-RLEGYIPQPY 829
Query: 655 L 655
L
Sbjct: 830 L 830
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 124/530 (23%), Positives = 251/530 (47%), Gaps = 36/530 (6%)
Query: 54 SLRKRNVEITILGRRGKLKEARKLFDEM----PQRDAVSYNSMIAVYLKNKDVHGAETIF 109
S+R N I+ R G L +A + +M D ++ ++ + K+ G + +
Sbjct: 102 SIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLS 161
Query: 110 KAMS----ERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTE 165
+S + + S+++ Y + G++D ++FD + +++ W +++GY +CG +
Sbjct: 162 DTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALD 221
Query: 166 EALQLF-----DQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNT----IAWTAM 216
++ F DQ+S + VT+ ++S A L+D + L+ ++
Sbjct: 222 SVIKGFSVMRMDQISPNA-VTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 217 VKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM------PDR 270
+ Y G+F + KLF M + +WN MISG + + ++E++ F M PD
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDA 340
Query: 271 NHVSWTAMVSGLAQNKMVEVARK-YFDIMPFK---DMAAWSAMITAYVDEKLLGEALELF 326
+++++++ +++ + +E ++ + IM D+ SA+I AY + + A +F
Sbjct: 341 --ITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIF 398
Query: 327 NLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIM 386
+ +V ++ +I GY+ NG ++L +F +++ P T+ SI+ ++ +
Sbjct: 399 SQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALK 458
Query: 387 ---QAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYA 443
+ H +I GF+ + A+I +Y+K G + A +FE L +D+VSW +MI A
Sbjct: 459 LGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCA 518
Query: 444 NHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKV 503
+ A+ +F +M SG D ++ LSAC++ + G+ + ++L V
Sbjct: 519 QSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAI-HGFMIKHSLASDV 577
Query: 504 EHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIK 553
S L+DM + G + AM+V T+ I +++ AC HG +K
Sbjct: 578 YSESTLIDMYAKCGNLKAAMNVFKTMKEKNI--VSWNSIIAACGNHGKLK 625
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 160/346 (46%), Gaps = 21/346 (6%)
Query: 224 GQFSEGYKLF--LEMPERNVRSWNVMISGCLSANRVDEAIHLFETM------PDRNHVSW 275
G FS+ K+F L++ ++R WN +IS + +++A+ + M PD + ++
Sbjct: 84 GSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVS--TF 141
Query: 276 TAMVSGLAQNKMVEVARKYFDIMPFKDMAA----WSAMITAYVDEKLLGEALELFNLVPE 331
+V K + D + M S++I AY++ + +LF+ V +
Sbjct: 142 PCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQ 201
Query: 332 KNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI---MQA 388
K+ IWN +++GY + G ++ F +M P T +++ C + I +Q
Sbjct: 202 KDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQL 261
Query: 389 HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHG 448
H +V+ G + + N+L+++YSK G A +F ++ D V+W MI Y G
Sbjct: 262 HGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLM 321
Query: 449 HHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSC 508
+L F M++SG PD ITF LL + S + +++ I ++++L + S
Sbjct: 322 EESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIM-RHSISLDIFLTSA 380
Query: 509 LVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKV 554
L+D + V+ A ++ S + +D V A++ LH + +
Sbjct: 381 LIDAYFKCRGVSMAQNIFSQC--NSVDVVVFTAMISG-YLHNGLYI 423
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 153/450 (34%), Positives = 254/450 (56%), Gaps = 12/450 (2%)
Query: 216 MVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSW 275
++ Y+ ++ ++LF +MP+RNV SW MIS +A+ L M N
Sbjct: 102 LINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPN 161
Query: 276 TAMVSGLAQ--NKMVEVARKYFDIMPF---KDMAAWSAMITAYVDEKLLGEALELFNLVP 330
S + + N M +V + I+ D+ SA+I + +AL +F+ +
Sbjct: 162 VYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMV 221
Query: 331 EKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI---MQ 387
+ +WN+II G+ +N + AL LF M R+ F T+TS++ +C G+ + MQ
Sbjct: 222 TGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQ 281
Query: 388 AHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGH 447
AH ++ ++Q+ + NAL+ +Y K G L A+ VF +K +DV++W+ MI A +G+
Sbjct: 282 AHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGY 339
Query: 448 GHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYS 507
AL++F RM +SGTKP+ IT VG+L ACSHAGL+ G F S+K Y ++ EHY
Sbjct: 340 SQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYG 399
Query: 508 CLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEP 567
C++D+LG+AG +++A+ +++ + E D LLGAC++ N+ +A +K+++L+P
Sbjct: 400 CMIDLLGKAGKLDDAVKLLNEM-ECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDP 458
Query: 568 TSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHP 627
+G Y LLSN YA ++WD ++R RM+++ +KK G S I+V + H F +G+ SHP
Sbjct: 459 EDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHP 518
Query: 628 QVEEIYGFLQQSLQPLMRETGYTPENSLLI 657
Q+ E+ L Q + L GY PE + ++
Sbjct: 519 QIVEVSKKLNQLIHRLT-GIGYVPETNFVL 547
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 126/228 (55%), Gaps = 3/228 (1%)
Query: 307 SAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFR 366
+ +I YV LL +A +LF+ +P++NV W T+I Y + +AL L +LMLR R
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 367 PCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFEL 426
P V T +S++ SC+GM ++ H +I G E + +V +ALI +++K G+ A+ VF+
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDE 219
Query: 427 LKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQG 486
+ + D + W ++I +A + AL++F RM +G ++ T +L AC+ L+ G
Sbjct: 220 MVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG 279
Query: 487 RRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEI 534
+ I Y+ +L + + LVDM + G + +A+ V + + ++
Sbjct: 280 MQAHVHIV-KYDQDLILN--NALVDMYCKCGSLEDALRVFNQMKERDV 324
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 197/410 (48%), Gaps = 34/410 (8%)
Query: 61 EITILGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAM---S 113
E T L + L A K D + D+ +Y+ +I + N+ VH I + +
Sbjct: 32 EFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNG 91
Query: 114 ERDVV-AQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFD 172
R ++ + +++ Y K L++A ++FD M +RN SWT++IS Y +C ++AL+L
Sbjct: 92 HRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLV 151
Query: 173 QM----SERSVVTWTTMVSGFAQNGLVDHARRFFDLMP---EKNTIAWTAMVKSYLDNGQ 225
M +V T+++++ + NG+ D ++ E + +A++ + G+
Sbjct: 152 LMLRDNVRPNVYTYSSVLR--SCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGE 209
Query: 226 FSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMV------ 279
+ +F EM + WN +I G +R D A+ LF+ M ++ A +
Sbjct: 210 PEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRA 269
Query: 280 -SGLAQNKMVEVA-RKYFDIMPF-KDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGI 336
+GLA ++E+ + + I+ + +D+ +A++ Y L +AL +FN + E++V
Sbjct: 270 CTGLA---LLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVIT 326
Query: 337 WNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCD--GMVEI--MQAHAMV 392
W+T+I G +NG + EAL+LF M S +P T+ ++ +C G++E +M
Sbjct: 327 WSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMK 386
Query: 393 IHLGFEQNTWVTNALITLYSKSGDLCSAM-LVFELLKSKDVVSWTAMIVA 441
G + +I L K+G L A+ L+ E+ D V+W ++ A
Sbjct: 387 KLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 153/342 (44%), Gaps = 66/342 (19%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNK------------------ 100
NV I + + L +A +LFD+MPQR+ +S+ +MI+ Y K K
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 101 -DVHGAETIFKAMS-----------------ERDVVAQSAMVDGYAKAGRLDNAREVFDN 142
+V+ ++ ++ + E DV +SA++D +AK G ++A VFD
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDE 219
Query: 143 MTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVV----TWTTMVSGFAQNGLVD-- 196
M +A W S+I G+ + R++ AL+LF +M + T T+++ L++
Sbjct: 220 MVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG 279
Query: 197 -----HARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGC 251
H ++ +++ I A+V Y G + ++F +M ER+V +W+ MISG
Sbjct: 280 MQAHVHIVKY-----DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGL 334
Query: 252 LSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIM-------PF 300
EA+ LFE M N+++ ++ + ++E YF M P
Sbjct: 335 AQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPV 394
Query: 301 KDMAAWSAMITAYVDEKLLGEALELFN-LVPEKNVGIWNTII 341
++ + MI L +A++L N + E + W T++
Sbjct: 395 RE--HYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 27/283 (9%)
Query: 58 RNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDV 117
R+ I + + G+ ++A +FDEM DA+ +NS+I + +N A +FK M
Sbjct: 197 RSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGF 256
Query: 118 VAQSAMVDGYAKAG------RLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLF 171
+A+ A + +A L V +++ +L+ Y +CG E+AL++F
Sbjct: 257 IAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVF 316
Query: 172 DQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMP----EKNTIAWTAMVKSYLDNGQFS 227
+QM ER V+TW+TM+SG AQNG A + F+ M + N I ++ + G
Sbjct: 317 NQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLE 376
Query: 228 EGYKLFLEM-------PERNVRSWNVMISGCLSANRVDEAIHLFETM---PDRNHVSWTA 277
+G+ F M P R + MI A ++D+A+ L M PD V+W
Sbjct: 377 DGWYYFRSMKKLYGIDPVRE--HYGCMIDLLGKAGKLDDAVKLLNEMECEPDA--VTWRT 432
Query: 278 MVSGL-AQNKMV--EVARKYFDIMPFKDMAAWSAMITAYVDEK 317
++ Q MV E A K + +D ++ + Y + +
Sbjct: 433 LLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQ 475
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 23/166 (13%)
Query: 371 TMTSIITSCDGMVEIMQAHAMVIHLGFEQN---TWVTNALITLYSKSGDLCSAMLVFELL 427
T + +I C + + + + HL F + ++ N LI +Y K L A +F+ +
Sbjct: 63 TYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQM 122
Query: 428 KSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACS--------H 479
++V+SWT MI AY+ AL++ M+ +P+ T+ +L +C+ H
Sbjct: 123 PQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLH 182
Query: 480 AGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDV 525
G++ +G L V S L+D+ + G +A+ V
Sbjct: 183 CGIIKEG------------LESDVFVRSALIDVFAKLGEPEDALSV 216
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 272 bits (695), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 186/635 (29%), Positives = 310/635 (48%), Gaps = 82/635 (12%)
Query: 77 LFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSA-----MVDGYAKAG 131
L + +RD + S+ A+Y+K+ +VA S V+ Y+K G
Sbjct: 15 LLKSVAERDLFTGKSLHALYVKS-----------------IVASSTYLSNHFVNLYSKCG 57
Query: 132 RLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQ 191
RL AR F + E N FS+ ++ Y + + A QLFD++ + V++ T++SG+A
Sbjct: 58 RLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYAD 117
Query: 192 NGLVDHARRFFDLMP----EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSW--N 245
A F M E + + ++ + D + F + S N
Sbjct: 118 ARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNN 177
Query: 246 VMISGCLSANRVDEAIHLFETMPD-RNHVSWTAMVSGLAQNKMVEVARKYFDIMPFK--- 301
++ + EA+ +F M + R+ VSW +M+ Q+K A + M FK
Sbjct: 178 AFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFK 237
Query: 302 -DMAAWSAMITAYVD-EKLLG-------------------------------------EA 322
DM ++++ A + L+G ++
Sbjct: 238 IDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDS 297
Query: 323 LELFNLVPEKNVGIWNTIIDGYVRNGE-AGEALRLFILMLRSCFRPCVTTMTSIITSCDG 381
++F + ++ +WNT+I GY N E + EA++ F M R RP + + ++C
Sbjct: 298 EKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSN 357
Query: 382 M---VEIMQAHAMVIHLGFEQN-TWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTA 437
+ + Q H + I N V NALI+LY KSG+L A VF+ + + VS+
Sbjct: 358 LSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNC 417
Query: 438 MIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAY 497
MI YA HGHG AL ++ RM+ SG P++ITFV +LSAC+H G V++G+ F+++K +
Sbjct: 418 MIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETF 477
Query: 498 NLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIP--PSEIDEAVLVALLGACKLHGNIKVA 555
+ + EHYSC++D+LGRAG + EA + +P P + A ALLGAC+ H N+ +A
Sbjct: 478 KIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWA---ALLGACRKHKNMALA 534
Query: 556 NSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGK 615
+L+ ++P ++ YV+L+N YA +W+E A VRK M+ K ++K G S I+VK K
Sbjct: 535 ERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKK 594
Query: 616 NHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYT 650
H+F + SHP + E+ +L++ ++ M++ GY
Sbjct: 595 KHVFVAEDWSHPMIREVNEYLEEMMKK-MKKVGYV 628
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 127/503 (25%), Positives = 218/503 (43%), Gaps = 72/503 (14%)
Query: 9 AFVLKTLVMKMGVCYHHRRRVFSQCQPIFRFLRNFTASISISHDWSLRKRNVEITILGRR 68
A +K++V +H ++S+C L A+ + + ++ NV + +
Sbjct: 32 ALYVKSIVASSTYLSNHFVNLYSKCGR----LSYARAAFYSTEEPNVFSYNVIVKAYAKD 87
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSER------------- 115
K+ AR+LFDE+PQ D VSYN++I+ Y ++ A +FK M +
Sbjct: 88 SKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLI 147
Query: 116 -------DVVAQ-----------------SAMVDGYAKAGRLDNAREVFDNMTE-RNAFS 150
D++ Q +A V Y+K G L A VF M E R+ S
Sbjct: 148 AACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVS 207
Query: 151 WTSLISGYFRCGRTEEALQLFDQMSERSV-VTWTTMVSGFAQNGLVDH---ARRFFDLMP 206
W S+I Y + +AL L+ +M + + T+ S +DH R+F +
Sbjct: 208 WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267
Query: 207 E----KNTIAWTAMVKSYLDNGQFSEGY---KLFLEMPERNVRSWNVMISG-CLSANRVD 258
+ +N+ + ++ Y G Y K+F E+ ++ WN MISG ++ +
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSE 327
Query: 259 EAIHLFETM------PDR-NHVSWTAMVSGL---AQNKMVE-VARKYFDIMPFKDMAAWS 307
EA+ F M PD + V T+ S L +Q K + +A K +P ++ +
Sbjct: 328 EAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIK--SHIPSNRISVNN 385
Query: 308 AMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRP 367
A+I+ Y L +A +F+ +PE N +N +I GY ++G EAL L+ ML S P
Sbjct: 386 ALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAP 445
Query: 368 CVTTMTSIITSCD--GMVEIMQAHAMVIHLGF--EQNTWVTNALITLYSKSGDLCSAMLV 423
T +++++C G V+ Q + + F E + +I L ++G L A
Sbjct: 446 NKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERF 505
Query: 424 FELLKSKD-VVSWTAMIVAYANH 445
+ + K V+W A++ A H
Sbjct: 506 IDAMPYKPGSVAWAALLGACRKH 528
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 271 bits (694), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 194/667 (29%), Positives = 334/667 (50%), Gaps = 76/667 (11%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYN-----------------------SMIAV--- 95
++ + G L ARK+F++M R+AV+ N SMI V
Sbjct: 250 VSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE 309
Query: 96 -YL------------------KNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNA 136
Y+ K ++VHG I + + V + +V+ YAK G + +A
Sbjct: 310 SYVILLSSFPEYSLAEEVGLKKGREVHG-HVITTGLVDFMVGIGNGLVNMYAKCGSIADA 368
Query: 137 REVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWT-TMVSGFAQNGLV 195
R VF MT++++ SW S+I+G + G EA++ + M ++ + T++S + +
Sbjct: 369 RRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASL 428
Query: 196 DHAR-------RFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMI 248
A+ L + N A++ Y + G +E K+F MPE + SWN +I
Sbjct: 429 KWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSII 488
Query: 249 SGCLSANR-VDEAIHLF----ETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDM 303
+ R + EA+ F N +++++++S ++ E+ ++ + ++
Sbjct: 489 GALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNI 548
Query: 304 A----AWSAMITAYVDEKLLGEALELFNLVPEKNVGI-WNTIIDGYVRNGEAGEALRLFI 358
A +A+I Y + ++F+ + E+ + WN++I GY+ N +AL L
Sbjct: 549 ADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVW 608
Query: 359 LMLRSCFRP---CVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSG 415
ML++ R T+ S S + M+ HA + E + V +AL+ +YSK G
Sbjct: 609 FMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCG 668
Query: 416 DLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSG-TKPDEITFVGLL 474
L A+ F + ++ SW +MI YA HG G AL++F M G T PD +TFVG+L
Sbjct: 669 RLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVL 728
Query: 475 SACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEI 534
SACSHAGL+ +G + F+S+ +Y L ++EH+SC+ D+LGRAG +++ D + +P +
Sbjct: 729 SACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMP---M 785
Query: 535 DEAVLV--ALLGA-CKLHG-NIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFA 590
VL+ +LGA C+ +G ++ + L LEP ++ YVLL N YAA +W++
Sbjct: 786 KPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLV 845
Query: 591 QVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYT 650
+ RK+MK+ +VKK +G+S + +K H+F G++SHP + IY L++ L MR+ GY
Sbjct: 846 KARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKE-LNRKMRDAGYV 904
Query: 651 PENSLLI 657
P+ +
Sbjct: 905 PQTGFAL 911
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 120/510 (23%), Positives = 231/510 (45%), Gaps = 41/510 (8%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDA-----VSYNSMI--AVYLKNKDVHGAE----T 107
N I++ + G + A ++F M Q D ++ S++ A L DV E T
Sbjct: 175 NSIISVYSQAGDQRSAFRIFSSM-QYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCT 233
Query: 108 IFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEA 167
I K+ D+ S +V +AK+G L AR+VF+ M RNA + L+ G R EEA
Sbjct: 234 IQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEA 293
Query: 168 LQLF---DQMSERSVVTWTTMVSGFAQNGLVD----------HARRFFDLMPEKNTIAWT 214
+LF + M + S ++ ++S F + L + H + +
Sbjct: 294 TKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGN 353
Query: 215 AMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVS 274
+V Y G ++ ++F M +++ SWN MI+G EA+ +++M + +
Sbjct: 354 GLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILP 413
Query: 275 WT-AMVSGLAQNKMVEVAR-------KYFDIMPFKDMAAWSAMITAYVDEKLLGEALELF 326
+ ++S L+ ++ A+ + + +++ +A++T Y + L E ++F
Sbjct: 414 GSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIF 473
Query: 327 NLVPEKNVGIWNTIIDGYVRNGEA-GEALRLFILMLRSCFRPCVTTMTSIITSCDGMV-- 383
+ +PE + WN+II R+ + EA+ F+ R+ + T +S++++ +
Sbjct: 474 SSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFG 533
Query: 384 EI-MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVF-ELLKSKDVVSWTAMIVA 441
E+ Q H + + NALI Y K G++ +F + + +D V+W +MI
Sbjct: 534 ELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Query: 442 YANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFD-SIKGAYNLN 500
Y ++ AL + M+ +G + D + +LSA + + +G V S++ +
Sbjct: 594 YIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESD 653
Query: 501 LKVEHYSCLVDMLGRAGLVNEAMDVVSTIP 530
+ V S LVDM + G ++ A+ +T+P
Sbjct: 654 VVVG--SALVDMYSKCGRLDYALRFFNTMP 681
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 157/375 (41%), Gaps = 75/375 (20%)
Query: 46 SISISHDWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKN------ 99
S+ + D ++ N +T+ G L E RK+F MP+ D VS+NS+I ++
Sbjct: 441 SLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPE 500
Query: 100 ------------------------------------KDVHGAETIFKAMSERDVVAQSAM 123
K +HG K + ++A+
Sbjct: 501 AVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHG--LALKNNIADEATTENAL 558
Query: 124 VDGYAKAGRLDNAREVFDNMTE-RNAFSWTSLISGYFRCGRTEEALQL---FDQMSER-S 178
+ Y K G +D ++F M E R+ +W S+ISGY +AL L Q +R
Sbjct: 559 IACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLD 618
Query: 179 VVTWTTMVSGFA-----QNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLF 233
+ T++S FA + G+ HA + E + + +A+V Y G+ + F
Sbjct: 619 SFMYATVLSAFASVATLERGMEVHACSVRACL-ESDVVVGSALVDMYSKCGRLDYALRFF 677
Query: 234 LEMPERNVRSWNVMISGCLSANRVDEAIHLFETM-------PDRNHVSWTAMVSGLAQNK 286
MP RN SWN MISG + +EA+ LFETM PD HV++ ++S +
Sbjct: 678 NTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPD--HVTFVGVLSACSHAG 735
Query: 287 MVEVARKYFDIMPFKDMAAWSAMITAY-VDEKLLGEALELFNL------VPEK-NVGIWN 338
++E K+F+ M D + I + +LG A EL L +P K NV IW
Sbjct: 736 LLEEGFKHFESMS--DSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWR 793
Query: 339 TIIDGYVR-NGEAGE 352
T++ R NG E
Sbjct: 794 TVLGACCRANGRKAE 808
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 112/508 (22%), Positives = 206/508 (40%), Gaps = 54/508 (10%)
Query: 63 TILGRRGKLKE-ARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQS 121
+ +G RG + +L+ +D N++I YL+ D A +F M R+ V+ +
Sbjct: 12 SCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWA 71
Query: 122 AMVDGYAKAGRLDNAREVFDNMTERNAFS-WTSLISGYFRCGRTEEALQLFDQMSERSVV 180
+V GY++ G A +M + FS + +S C LF + +
Sbjct: 72 CIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMF 131
Query: 181 TWTTMVSGFAQN----------GLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGY 230
+ V N G V +A F + KN+++W +++ Y G +
Sbjct: 132 KLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAF 191
Query: 231 KLFLEMPERNVR----SWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNK 286
++F M R ++ +++ S D + L E + T SGL
Sbjct: 192 RIFSSMQYDGSRPTEYTFGSLVTTACSLTEPD--VRLLE------QIMCTIQKSGL---- 239
Query: 287 MVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVR 346
D+ S +++A+ L A ++FN + +N N ++ G VR
Sbjct: 240 -------------LTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVR 286
Query: 347 NGEAGEALRLFI---LMLRSCFRPCVTTMTSI----ITSCDGMVEIMQAHAMVIHLGF-E 398
EA +LF+ M+ V ++S + G+ + + H VI G +
Sbjct: 287 QKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVD 346
Query: 399 QNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARM 458
+ N L+ +Y+K G + A VF + KD VSW +MI +G A++ + M
Sbjct: 347 FMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSM 406
Query: 459 VTSGTKPDEITFVGLLSACSHAGLVNQGRRVF-DSIKGAYNLNLKVEHYSCLVDMLGRAG 517
P T + LS+C+ G+++ +S+K +LN+ V + L+ + G
Sbjct: 407 RRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSN--ALMTLYAETG 464
Query: 518 LVNEAMDVVSTIPPSEIDEAVLVALLGA 545
+NE + S++P E D+ +++GA
Sbjct: 465 YLNECRKIFSSMP--EHDQVSWNSIIGA 490
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 169/608 (27%), Positives = 301/608 (49%), Gaps = 29/608 (4%)
Query: 71 LKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKA 130
+A + +P S++S+I K K + +F M ++ S ++ K
Sbjct: 66 FNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKV 125
Query: 131 GRLDNAREVFDNM--------TERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTW 182
+A +V + + +AF S+ Y RCGR +A ++FD+MS++ VVT
Sbjct: 126 CAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTC 185
Query: 183 TTMVSGFAQNGLVDHARRFFDLMP----EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPE 238
+ ++ +A+ G ++ R M E N ++W ++ + +G E +F ++
Sbjct: 186 SALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHH 245
Query: 239 RNVRSWNVMISGCLSANRVDEAIHLFETMPD--------RNHVSWTAMVSGLAQNKMVEV 290
V +S L + E +++ + ++ +AM+ ++ V
Sbjct: 246 LGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYG 305
Query: 291 ARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEK----NVGIWNTIIDGYVR 346
F+ + +A IT L+ +ALE+F L E+ NV W +II G +
Sbjct: 306 IISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQ 365
Query: 347 NGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQA---HAMVIHLGFEQNTWV 403
NG+ EAL LF M + +P T+ S++ +C + + H + + N V
Sbjct: 366 NGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHV 425
Query: 404 TNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGT 463
+ALI +Y+K G + + +VF ++ +K++V W +++ ++ HG + +F ++ +
Sbjct: 426 GSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRL 485
Query: 464 KPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAM 523
KPD I+F LLSAC GL ++G + F + Y + ++EHYSC+V++LGRAG + EA
Sbjct: 486 KPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAY 545
Query: 524 DVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAE 583
D++ + P E D V ALL +C+L N+ +A +KL LEP + G YVLLSN YAA+
Sbjct: 546 DLIKEM-PFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAK 604
Query: 584 EQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPL 643
W E +R +M+ +KK G S IQVK + + G++SHPQ+++I + + +
Sbjct: 605 GMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDE-ISKE 663
Query: 644 MRETGYTP 651
MR++G+ P
Sbjct: 664 MRKSGHRP 671
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/435 (20%), Positives = 176/435 (40%), Gaps = 95/435 (21%)
Query: 67 RRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMS----ERDVVAQSA 122
R G++ +ARK+FD M +D V+ ++++ Y + + I M E ++V+ +
Sbjct: 163 RCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNG 222
Query: 123 MVDGYAKAGRLDNAREVF----------DNMT---------ERNAFSWTSLISGYF---- 159
++ G+ ++G A +F D +T + + LI GY
Sbjct: 223 ILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQG 282
Query: 160 ----RC------------GRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFD 203
+C G + LF+Q ++G ++NGLVD A F+
Sbjct: 283 LLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFE 342
Query: 204 LMPEK----NTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSA----- 254
L E+ N ++WT+++ NG+ E +LF EM V+ +V I L A
Sbjct: 343 LFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIA 402
Query: 255 ----NRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMI 310
R + + D HV +A++ A+ + +++ F++MP K++
Sbjct: 403 ALGHGRSTHGFAVRVHLLDNVHVG-SALIDMYAKCGRINLSQIVFNMMPTKNLVC----- 456
Query: 311 TAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVT 370
WN++++G+ +G+A E + +F ++R+ +P
Sbjct: 457 --------------------------WNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFI 490
Query: 371 TMTSIITSCDGMVEIMQA-----HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAM-LVF 424
+ TS++++C G V + M G + + ++ L ++G L A L+
Sbjct: 491 SFTSLLSAC-GQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIK 549
Query: 425 ELLKSKDVVSWTAMI 439
E+ D W A++
Sbjct: 550 EMPFEPDSCVWGALL 564
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 175/593 (29%), Positives = 312/593 (52%), Gaps = 40/593 (6%)
Query: 70 KLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAK 129
++K A +FD A+S+ +L + T+ K E D+V ++ + Y++
Sbjct: 164 RMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQ--STVVKTGLESDLVVGNSFITMYSR 221
Query: 130 AGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTE-EALQLFDQMSERSV----VTWTT 184
+G AR VFD M+ ++ SW SL+SG + G EA+ +F M V V++T+
Sbjct: 222 SGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTS 281
Query: 185 MVSGFAQNGLVDHARRFFDLMPEKNTIAW----TAMVKSYLDNGQFSEGYKLFLEMPERN 240
+++ + AR+ L ++ + ++ Y G +F +M ERN
Sbjct: 282 VITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERN 341
Query: 241 VRSWNVMISGCLSANRVDEAIHLFETM------PDRNHVSWTAMVSGLAQNKMVEVARKY 294
V SW MIS +N+ D+A+ +F M P N V++ +++ + N+ ++ K
Sbjct: 342 VVSWTTMIS----SNK-DDAVSIFLNMRFDGVYP--NEVTFVGLINAVKCNEQIKEGLKI 394
Query: 295 FDIMP----FKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEA 350
+ + + ++ IT Y + L +A + F + + + WN +I G+ +NG +
Sbjct: 395 HGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFS 454
Query: 351 GEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI-----MQAHAMVIHLGFEQNTWVTN 405
EAL++F+ P T S++ + +I + HA ++ LG V++
Sbjct: 455 HEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSS 513
Query: 406 ALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKP 465
AL+ +Y+K G++ + VF + K+ WT++I AY++HG + +F +M+ P
Sbjct: 514 ALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAP 573
Query: 466 DEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDV 525
D +TF+ +L+AC+ G+V++G +F+ + YNL EHYSC+VDMLGRAG + EA ++
Sbjct: 574 DLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEEL 633
Query: 526 VSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQ 585
+S +P E++L ++LG+C+LHGN+K+ + + + ++P SG YV + N YA +E+
Sbjct: 634 MSEVPGGP-GESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEE 692
Query: 586 WDEFAQVRKRMKEKNVKKISGFSQIQVKGKN-----HLFFVGERSHPQVEEIY 633
WD+ A++RK M++KNV K +GFS I V F G++SHP+ +EIY
Sbjct: 693 WDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIY 745
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 192/648 (29%), Positives = 337/648 (52%), Gaps = 72/648 (11%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMS----ERDV 117
+ + G+ G L +A K+FD MP RD V+++++++ L+N +V A +FK M E D
Sbjct: 143 LCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDA 202
Query: 118 VAQSAMVDG-----------------------------------YAKAGRLDNAREVFDN 142
V ++V+G Y+K G L ++ +F+
Sbjct: 203 VTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEK 262
Query: 143 MTERNAFSWTSLISGYFRCGRTEEALQLFDQMS----ERSVVTWTTMVSGFAQNGLVDHA 198
+ ++NA SWT++IS Y R +E+AL+ F +M E ++VT +++S GL+
Sbjct: 263 IAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREG 322
Query: 199 RRFF------DLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCL 252
+ +L P +++ A+V+ Y + G+ S+ + + +RN+ +WN +IS L
Sbjct: 323 KSVHGFAVRRELDPNYESLSL-ALVELYAECGKLSDCETVLRVVSDRNIVAWNSLIS--L 379
Query: 253 SANR--VDEAIHLFETM------PDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMA 304
A+R V +A+ LF M PD + + +S +V + ++ + D++
Sbjct: 380 YAHRGMVIQALGLFRQMVTQRIKPDA--FTLASSISACENAGLVPLGKQIHGHVIRTDVS 437
Query: 305 ---AWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILML 361
+++I Y + A +FN + ++V WN+++ G+ +NG + EA+ LF M
Sbjct: 438 DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMY 497
Query: 362 RSCFRPCVTTMTSIITSCDGMVEIMQA---HAMVIHLGFEQNTWVTNALITLYSKSGDLC 418
S T ++I +C + + + H +I G ++ + ALI +Y+K GDL
Sbjct: 498 HSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLN 556
Query: 419 SAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACS 478
+A VF + S+ +VSW++MI AY HG A+ F +MV SGTKP+E+ F+ +LSAC
Sbjct: 557 AAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACG 616
Query: 479 HAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAV 538
H+G V +G+ F+ +K ++ ++ EH++C +D+L R+G + EA + +P D +V
Sbjct: 617 HSGSVEEGKYYFNLMK-SFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLA-DASV 674
Query: 539 LVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKE 598
+L+ C++H + + +I L + +G Y LLSN YA E +W+EF ++R MK
Sbjct: 675 WGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKS 734
Query: 599 KNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRE 646
N+KK+ G+S I++ K F GE + Q +EIY FL +LQ L E
Sbjct: 735 SNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFL-GNLQNLTNE 781
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 135/502 (26%), Positives = 233/502 (46%), Gaps = 79/502 (15%)
Query: 102 VHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRC 161
VHG I K + D V +++++ Y + G L +A +VFD M R+ +W++L+S
Sbjct: 123 VHG--RIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLEN 180
Query: 162 GRTEEALQLF----DQMSERSVVTWTTMVSGFAQNGLVDHAR------------------ 199
G +AL++F D E VT ++V G A+ G + AR
Sbjct: 181 GEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLC 240
Query: 200 -----------------RFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVR 242
R F+ + +KN ++WTAM+ SY + G+FS E+ +R
Sbjct: 241 NSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSY-NRGEFS----------EKALR 289
Query: 243 SWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVE--VARKYFDIMPF 300
S++ MI + N V L+ + S ++ + + K V R+ D P
Sbjct: 290 SFSEMIKSGIEPNLVT----LYSVL------SSCGLIGLIREGKSVHGFAVRRELD--PN 337
Query: 301 KDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILM 360
+ + A++ Y + L + + +V ++N+ WN++I Y G +AL LF M
Sbjct: 338 YESLSL-ALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQM 396
Query: 361 LRSCFRPCVTTMTSIITSCD--GMVEI-MQAHAMVIHLGFEQNTWVTNALITLYSKSGDL 417
+ +P T+ S I++C+ G+V + Q H VI + +V N+LI +YSKSG +
Sbjct: 397 VTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV-SDEFVQNSLIDMYSKSGSV 455
Query: 418 CSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSAC 477
SA VF +K + VV+W +M+ ++ +G+ A+ +F M S + +E+TF+ ++ AC
Sbjct: 456 DSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQAC 515
Query: 478 SHAGLVNQGRRVFDS--IKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEID 535
S G + +G+ V I G +L + L+DM + G +N A V + S
Sbjct: 516 SSIGSLEKGKWVHHKLIISGLKDLFTD----TALIDMYAKCGDLNAAETVFRAM--SSRS 569
Query: 536 EAVLVALLGACKLHGNIKVANS 557
+++ A +HG I A S
Sbjct: 570 IVSWSSMINAYGMHGRIGSAIS 591
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 216/446 (48%), Gaps = 43/446 (9%)
Query: 115 RDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQM 174
RD + + +++ YA G D++R VF+ ++F + LI C + A+ L+ ++
Sbjct: 32 RDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRL 91
Query: 175 SERSVVTWTTMVSGF-------AQNGLVDHAR-------RFFDLMPEKNTIAWTAMVKSY 220
V+ TT +S F A G +H R + + + T+++ Y
Sbjct: 92 -----VSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMY 146
Query: 221 LDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWT 276
G S+ K+F MP R++ +W+ ++S CL V +A+ +F+ M D + V+
Sbjct: 147 GQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMI 206
Query: 277 AMVSGLAQNKMVEVA--------RKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNL 328
++V G A+ + +A RK FD+ D ++++T Y L + +F
Sbjct: 207 SVVEGCAELGCLRIARSVHGQITRKMFDL----DETLCNSLLTMYSKCGDLLSSERIFEK 262
Query: 329 VPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQ- 387
+ +KN W +I Y R + +ALR F M++S P + T+ S+++SC G++ +++
Sbjct: 263 IAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSC-GLIGLIRE 321
Query: 388 ---AHAMVIHLGFEQN-TWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYA 443
H + + N ++ AL+ LY++ G L V ++ +++V+W ++I YA
Sbjct: 322 GKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYA 381
Query: 444 NHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKV 503
+ G AL +F +MVT KPD T +SAC +AGLV G+++ + + V
Sbjct: 382 HRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFV 441
Query: 504 EHYSCLVDMLGRAGLVNEAMDVVSTI 529
++ L+DM ++G V+ A V + I
Sbjct: 442 QN--SLIDMYSKSGSVDSASTVFNQI 465
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 178/606 (29%), Positives = 308/606 (50%), Gaps = 86/606 (14%)
Query: 90 NSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAF 149
NS++ +Y K + + AE++F+ ++ D + + MVDGY ++ RL +A ++FD M ER+
Sbjct: 80 NSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCV 139
Query: 150 SWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNG------------ 193
S+T+LI GY + + EA++LF +M + VT T++S + G
Sbjct: 140 SYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLA 199
Query: 194 -----------------------LVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGY 230
+ AR+ FD MPE+N + W M+ Y G +
Sbjct: 200 IKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAE 259
Query: 231 KLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM------PDR----NHVSWTAMVS 280
+LF ++ E+++ SW MI GCL N++DEA+ + M P + +S +A
Sbjct: 260 ELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSV 319
Query: 281 GLAQNKMVE--VARKYFDIMPF--------------------------KD-MAAWSAMIT 311
G ++ + + ++ FD F KD +A+ +A+I
Sbjct: 320 GSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIA 379
Query: 312 AYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSC-FRPCVT 370
+V ++ +A E+F+ +K++ WN +I GY ++ AL LF M+ S +P
Sbjct: 380 GFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAI 439
Query: 371 TMTSI---ITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELL 427
TM S+ I+S + E +AH + N +T A+I +Y+K G + +A+ +F
Sbjct: 440 TMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQT 499
Query: 428 K---SKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVN 484
K S + W A+I A HGH AL +++ + + KP+ ITFVG+LSAC HAGLV
Sbjct: 500 KNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVE 559
Query: 485 QGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLG 544
G+ F+S+K + + ++HY C+VD+LG+AG + EA +++ +P + D + LL
Sbjct: 560 LGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPV-KADVMIWGMLLS 618
Query: 545 ACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKI 604
A + HGN+++A +L +++P+ G V+LSN YA +W++ A VR+ M+ ++V+
Sbjct: 619 ASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVEWS 678
Query: 605 SGFSQI 610
FS +
Sbjct: 679 RAFSGV 684
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 133/497 (26%), Positives = 230/497 (46%), Gaps = 70/497 (14%)
Query: 130 AGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGF 189
GR + R V + + N + S+++ Y +C +A +F ++ ++ MV G+
Sbjct: 59 CGRQIHCR-VLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGY 117
Query: 190 AQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMIS 249
++ + A + FD+MPE++ +++T ++K Y N Q+SE +LF EM + V ++
Sbjct: 118 VRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLA 177
Query: 250 GCLSA---------NRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPF 300
+SA R+ +++ + + R VS T ++ ++ ARK FD MP
Sbjct: 178 TVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVS-TNLLHMYCLCLCLKDARKLFDEMPE 236
Query: 301 KDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILM 360
+++ W+ M+ Y L+ +A ELF+ + EK++ W T+IDG +R + EAL + M
Sbjct: 237 RNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEM 296
Query: 361 LRSCFRPCVTTMTSIITSCD---GMVEIMQAHAMVIHLGFE-----QNTWV--------- 403
LR +P M ++++ G + +Q H ++ GF+ Q T +
Sbjct: 297 LRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDI 356
Query: 404 -----------------TNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHG 446
NALI + K+G + A VF+ KD+ SW AMI YA
Sbjct: 357 KLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSL 416
Query: 447 HGHHALQVFARMVTSG-TKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAY---NLNLK 502
AL +F M++S KPD IT V + SA S G + +G+R D + + N NL
Sbjct: 417 SPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLT 476
Query: 503 VEHYSCLVDMLGRAGLVNEAMDVV--------STIPPSEIDEAVLVALLGACKLHGNIKV 554
+ ++DM + G + A+++ STI P A++ HG+ K+
Sbjct: 477 ----AAIIDMYAKCGSIETALNIFHQTKNISSSTISPWN-------AIICGSATHGHAKL 525
Query: 555 ANSIGQKLLSL--EPTS 569
A + L SL +P S
Sbjct: 526 ALDLYSDLQSLPIKPNS 542
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 43/166 (25%)
Query: 347 NGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNA 406
+GE+ + R + L SC S + + Q H V+ G + N ++ N+
Sbjct: 34 SGESSDTERALVSALGSC------------ASSNDVTCGRQIHCRVLKSGLDSNGYICNS 81
Query: 407 LITLYSK-------------------------------SGDLCSAMLVFELLKSKDVVSW 435
++ +Y+K S L A+ +F+++ + VS+
Sbjct: 82 VLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSY 141
Query: 436 TAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAG 481
T +I YA + A+++F M G +E+T ++SACSH G
Sbjct: 142 TTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLG 187
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 147/467 (31%), Positives = 258/467 (55%), Gaps = 46/467 (9%)
Query: 232 LFLEMPERNVRSWN--VMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVE 289
+F EMP+R S + V C+ +D +FE MP ++ VS+ +++G AQ+ M E
Sbjct: 165 VFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYE 224
Query: 290 VARK--------------------------YFDIMPFKDMAAW-------------SAMI 310
A + Y D++ K++ + S+++
Sbjct: 225 DALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLV 284
Query: 311 TAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVT 370
Y + ++ +F+ + ++ WN+++ GYV+NG EALRLF M+ + +P
Sbjct: 285 DMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAV 344
Query: 371 TMTSIITSCDGMVEI---MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELL 427
+S+I +C + + Q H V+ GF N ++ +AL+ +YSK G++ +A +F+ +
Sbjct: 345 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM 404
Query: 428 KSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGR 487
D VSWTA+I+ +A HGHGH A+ +F M G KP+++ FV +L+ACSH GLV++
Sbjct: 405 NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAW 464
Query: 488 RVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACK 547
F+S+ Y LN ++EHY+ + D+LGRAG + EA + +S + E +V LL +C
Sbjct: 465 GYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKM-CVEPTGSVWSTLLSSCS 523
Query: 548 LHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGF 607
+H N+++A + +K+ +++ + G YVL+ N YA+ +W E A++R RM++K ++K
Sbjct: 524 VHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPAC 583
Query: 608 SQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPENS 654
S I++K K H F G+RSHP +++I FL+ ++ + +E GY + S
Sbjct: 584 SWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKE-GYVADTS 629
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 113/476 (23%), Positives = 224/476 (47%), Gaps = 47/476 (9%)
Query: 153 SLISGYFRCGRTEEALQLFDQMSERSVVTWTT---MVSGFAQNGLVDHARRFFDLMPEKN 209
+LI R +A QL Q ++ T+ ++S + L+ A F +
Sbjct: 10 TLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPP 69
Query: 210 TIAWTAMVKSYLDNGQFSEGYKLFLEM------PERNVRSWNVMISGC--LSANRVDEAI 261
+AW ++++ + D FS+ F+EM P+ NV + ++ C + R E++
Sbjct: 70 VLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNV--FPSVLKSCTMMMDLRFGESV 127
Query: 262 HLF--ETMPDRNHVSWTAMVSGLAQNKMVEVARK-----YFDIMPFK-------DMAAWS 307
H F D + + A+++ A K++ + K FD MP + D+ A +
Sbjct: 128 HGFIVRLGMDCDLYTGNALMNMYA--KLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAET 185
Query: 308 AMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRP 367
++ +D +F ++P K+V +NTII GY ++G +ALR+ M + +P
Sbjct: 186 CIMPFGID-----SVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKP 240
Query: 368 CVTTMTSIITSCDGMVEIMQA---HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVF 424
T++S++ V++++ H VI G + + ++ ++L+ +Y+KS + + VF
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 425 ELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVN 484
L +D +SW +++ Y +G + AL++F +MVT+ KP + F ++ AC+H ++
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLH 360
Query: 485 QGRRVFDSI-KGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALL 543
G+++ + +G + N+ + S LVDM + G + A + + + +DE A++
Sbjct: 361 LGKQLHGYVLRGGFGSNIFIA--SALVDMYSKCGNIKAARKIFDRM--NVLDEVSWTAII 416
Query: 544 GACKLHGNIKVANSIGQ--KLLSLEPTSSGGYVLL---SNAYAAEEQWDEFAQVRK 594
LHG+ A S+ + K ++P +L S+ +E W F + K
Sbjct: 417 MGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTK 472
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 163/389 (41%), Gaps = 95/389 (24%)
Query: 71 LKEARKLFDEMPQRDAVSYNSMIAVY---------------------------------- 96
+ R++F+ MP++D VSYN++IA Y
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 97 -------LKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAF 149
+K K++HG + + + DV S++VD YAK+ R++++ VF + R+
Sbjct: 252 FSEYVDVIKGKEIHG--YVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGI 309
Query: 150 SWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMV------------------- 186
SW SL++GY + GR EAL+LF QM V V +++++
Sbjct: 310 SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYV 369
Query: 187 --SGFAQN--------------GLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGY 230
GF N G + AR+ FD M + ++WTA++ + +G E
Sbjct: 370 LRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAV 429
Query: 231 KLFLEMPERNVRSWNV----MISGCLSANRVDEAIHLFETMP-----DRNHVSWTAMVSG 281
LF EM + V+ V +++ C VDEA F +M ++ + A+
Sbjct: 430 SLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADL 489
Query: 282 LAQNKMVEVARKYFDIMPFKDMAA-WSAMITA---YVDEKLLGEALELFNLVPEKNVGIW 337
L + +E A + M + + WS ++++ + + +L + E V +N+G +
Sbjct: 490 LGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAY 549
Query: 338 NTIIDGYVRNGEAGEALRLFILMLRSCFR 366
+ + Y NG E +L + M + R
Sbjct: 550 VLMCNMYASNGRWKEMAKLRLRMRKKGLR 578
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/417 (20%), Positives = 160/417 (38%), Gaps = 122/417 (29%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVV 118
N+ +LG K+ +FDEMPQR + S + DV
Sbjct: 148 NMYAKLLGMGSKISVG-NVFDEMPQRTSNS------------------------GDEDVK 182
Query: 119 AQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMS--- 175
A++ ++ +D+ R VF+ M ++ S+ ++I+GY + G E+AL++ +M
Sbjct: 183 AETCIM-----PFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTD 237
Query: 176 ------------------------------------ERSVVTWTTMVSGFAQNGLVDHAR 199
+ V +++V +A++ ++ +
Sbjct: 238 LKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSE 297
Query: 200 RFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDE 259
R F + ++ I+W ++V Y+ NG+++E +LF +M V+ V S + A
Sbjct: 298 RVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLA 357
Query: 260 AIHLFETMP--------DRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMIT 311
+HL + + N +A+V ++ ++ ARK FD M D +W+A+I
Sbjct: 358 TLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAII- 416
Query: 312 AYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTT 371
+G AL +G EA+ LF M R +P
Sbjct: 417 -------MGHAL-----------------------HGHGHEAVSLFEEMKRQGVKPNQVA 446
Query: 372 MTSIITSCDGMVEIMQAHAMVIHLGFEQNTW-VTNALITLYSKSGDLCSAMLVFELL 427
+++T+C H+G W N++ +Y + +L V +LL
Sbjct: 447 FVAVLTACS-------------HVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLL 490
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 269 bits (688), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 153/480 (31%), Positives = 261/480 (54%), Gaps = 30/480 (6%)
Query: 176 ERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLE 235
E V +++ +++ G V+ AR+ FD M E++ ++W M+ Y N SE +FLE
Sbjct: 93 EGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLE 152
Query: 236 MPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARK-Y 294
M + IS LSA V+ L K+ ++ K
Sbjct: 153 MRNEGFKFSEFTISSVLSACGVN--------------------CDALECKKLHCLSVKTC 192
Query: 295 FDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEAL 354
D+ ++ +A++ Y ++ +A+++F + +K+ W++++ GYV+N EAL
Sbjct: 193 IDL----NLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEAL 248
Query: 355 RLFILMLRSCFRPCVTTMTSIITSCD---GMVEIMQAHAMVIHLGFEQNTWVTNALITLY 411
L+ R T++S+I +C ++E Q HA++ GF N +V ++ + +Y
Sbjct: 249 LLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMY 308
Query: 412 SKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFV 471
+K G L + ++F ++ K++ W +I +A H + +F +M G P+E+TF
Sbjct: 309 AKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFS 368
Query: 472 GLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPP 531
LLS C H GLV +GRR F ++ Y L+ V HYSC+VD+LGRAGL++EA +++ +I P
Sbjct: 369 SLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI-P 427
Query: 532 SEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQ 591
+ ++ +LL +C+++ N+++A +KL LEP ++G +VLLSN YAA +QW+E A+
Sbjct: 428 FDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAK 487
Query: 592 VRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTP 651
RK +++ +VKK+ G S I +K K H F VGE HP++ EI L +L R+ GY P
Sbjct: 488 SRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTL-DNLVIKFRKFGYKP 546
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 158/340 (46%), Gaps = 57/340 (16%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIF--------- 109
NV I + G ++ AR++FD M +R VS+N+MI +Y +N+ A IF
Sbjct: 100 NVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFK 159
Query: 110 ------------------------------KAMSERDVVAQSAMVDGYAKAGRLDNAREV 139
K + ++ +A++D YAK G + +A +V
Sbjct: 160 FSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQV 219
Query: 140 FDNMTERNAFSWTSLISGYFRCGRTEEALQLF---DQMS-ERSVVTWTTMVSGFAQNGLV 195
F++M ++++ +W+S+++GY + EEAL L+ +MS E++ T ++++ + +
Sbjct: 220 FESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAAL 279
Query: 196 DHARRFFDLMPE----KNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGC 251
++ ++ + N ++ V Y G E Y +F E+ E+N+ WN +ISG
Sbjct: 280 IEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGF 339
Query: 252 LSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIMPF-----KD 302
R E + LFE M N V++++++S +VE R++F +M +
Sbjct: 340 AKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPN 399
Query: 303 MAAWSAMITAYVDEKLLGEALELFNLVP-EKNVGIWNTII 341
+ +S M+ LL EA EL +P + IW +++
Sbjct: 400 VVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLL 439
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 164/353 (46%), Gaps = 25/353 (7%)
Query: 97 LKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLIS 156
++ K HG I + E DV + +++ Y+K G ++ AR+VFD M ER+ SW ++I
Sbjct: 78 MEAKACHG--KIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIG 135
Query: 157 GYFRCGRTEEALQLFDQMSER----SVVTWTTMVSGFAQNGLVDHARRFFDLMPEK---- 208
Y R EAL +F +M S T ++++S N ++ L +
Sbjct: 136 LYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDL 195
Query: 209 NTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMP 268
N TA++ Y G + ++F M +++ +W+ M++G + +EA+ L+
Sbjct: 196 NLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQ 255
Query: 269 ----DRNHVSWTAMVSGLAQ-NKMVEVARKYFDIMPF---KDMAAWSAMITAYVDEKLLG 320
++N + ++++ + ++E + + I ++ S+ + Y L
Sbjct: 256 RMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLR 315
Query: 321 EALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC- 379
E+ +F+ V EKN+ +WNTII G+ ++ E + LF M + P T +S+++ C
Sbjct: 316 ESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCG 375
Query: 380 -DGMVEIMQA--HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKS 429
G+VE + M G N + ++ + ++G L A +EL+KS
Sbjct: 376 HTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEA---YELIKS 425
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 136/303 (44%), Gaps = 55/303 (18%)
Query: 46 SISISHDWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGA 105
S+ D +L + + + G +K+A ++F+ M + +V+++SM+A Y++NK+ A
Sbjct: 188 SVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEA 247
Query: 106 ETIFK-------------------------AMSE--------------RDVVAQSAMVDG 126
+++ A+ E +V S+ VD
Sbjct: 248 LLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDM 307
Query: 127 YAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTW 182
YAK G L + +F + E+N W ++ISG+ + R +E + LF++M + + VT+
Sbjct: 308 YAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTF 367
Query: 183 TTMVSGFAQNGLVDHARRFFDLMP-----EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMP 237
++++S GLV+ RRFF LM N + ++ MV G SE Y+L +P
Sbjct: 368 SSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIP 427
Query: 238 -ERNVRSWNVMISGCLSANRVD----EAIHLFETMPDR--NHVSWTAMVSGLAQNKMVEV 290
+ W +++ C ++ A LFE P+ NHV + + + Q + +
Sbjct: 428 FDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAK 487
Query: 291 ARK 293
+RK
Sbjct: 488 SRK 490
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 269 bits (687), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 180/638 (28%), Positives = 321/638 (50%), Gaps = 69/638 (10%)
Query: 67 RRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDG 126
+ G + AR +FD +P++ V++ +MI+ +K + + +F + E +VV ++
Sbjct: 195 KDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILST 254
Query: 127 YAKAGR----LDNAREVFDNMT----ERNAFSWTSLISGYFRCGRTEEALQLFDQMSERS 178
A L+ +++ ++ E +A LI Y +CGR A +LF+ M ++
Sbjct: 255 VLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKN 314
Query: 179 VVTWTTMVSGFAQNGLVDHARRFFDLMPE------------------------------- 207
+++WTT++SG+ QN L A F M +
Sbjct: 315 IISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHA 374
Query: 208 --------KNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSAN---R 256
++ +++ Y ++ K+F +V +N MI G
Sbjct: 375 YTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWE 434
Query: 257 VDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIMPFK-----DMAAWS 307
+ EA+++F M R + +++ +++ A + ++++ +M FK D+ A S
Sbjct: 435 LHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLM-FKYGLNLDIFAGS 493
Query: 308 AMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRP 367
A+I Y + L ++ +F+ + K++ IWN++ GYV+ E EAL LF+ + S RP
Sbjct: 494 ALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERP 553
Query: 368 CVTTMTSIITSCDGMVEIM---QAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVF 424
T +++T+ + + + H ++ G E N ++TNAL+ +Y+K G A F
Sbjct: 554 DEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAF 613
Query: 425 ELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVN 484
+ S+DVV W ++I +YANHG G ALQ+ +M++ G +P+ ITFVG+LSACSHAGLV
Sbjct: 614 DSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVE 673
Query: 485 QGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIP--PSEIDEAVLVAL 542
G + F+ + + + + EHY C+V +LGRAG +N+A +++ +P P+ I V +L
Sbjct: 674 DGLKQFE-LMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAI---VWRSL 729
Query: 543 LGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVK 602
L C GN+++A + + +P SG + +LSN YA++ W E +VR+RMK + V
Sbjct: 730 LSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVV 789
Query: 603 KISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSL 640
K G S I + + H+F ++SH + +IY L L
Sbjct: 790 KEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLL 827
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 150/577 (25%), Positives = 258/577 (44%), Gaps = 73/577 (12%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIA-------------VYLK------- 98
N+ I + R G + ARK+F++MP+R+ VS+++M++ V+L+
Sbjct: 83 NILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKD 142
Query: 99 ---------------NKDVHGAETIFKAMS-------ERDVVAQSAMVDGYAKAGRLDNA 136
D G +F+ S +RDV + ++D Y K G +D A
Sbjct: 143 SPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYA 202
Query: 137 REVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVV----TWTTMVSG---- 188
R VFD + E++ +WT++ISG + GR+ +LQLF Q+ E +VV +T++S
Sbjct: 203 RLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSIL 262
Query: 189 -FAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVM 247
F + G HA E + ++ SY+ G+ +KLF MP +N+ SW +
Sbjct: 263 PFLEGGKQIHA-HILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTL 321
Query: 248 ISGCLSANRVDEAIHLFETM------PDRNHVS--WTAMVSGLAQNKMVEVARKYFDIMP 299
+SG EA+ LF +M PD S T+ S A +V
Sbjct: 322 LSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANL 381
Query: 300 FKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNG---EAGEALRL 356
D +++I Y L +A ++F++ +V ++N +I+GY R G E EAL +
Sbjct: 382 GNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNI 441
Query: 357 FILMLRSCFRPCVTTMTSIITSCDGMVEI---MQAHAMVIHLGFEQNTWVTNALITLYSK 413
F M RP + T S++ + + + Q H ++ G + + +ALI +YS
Sbjct: 442 FRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSN 501
Query: 414 SGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGL 473
L + LVF+ +K KD+V W +M Y AL +F + S +PDE TF +
Sbjct: 502 CYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANM 561
Query: 474 LSACSHAGLVNQGRRVF-DSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPS 532
++A + V G+ +K N + + L+DM + G +A +
Sbjct: 562 VTAAGNLASVQLGQEFHCQLLKRGLECNPYITN--ALLDMYAKCGSPEDAHKAFDSAASR 619
Query: 533 EIDEAVLVALLGACKLHGNIKVANSIGQKLLS--LEP 567
++ +++ + HG K A + +K++S +EP
Sbjct: 620 DV--VCWNSVISSYANHGEGKKALQMLEKMMSEGIEP 654
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 92/193 (47%), Gaps = 13/193 (6%)
Query: 389 HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHG 448
H +I G E +T+++N LI LYS++G + A VFE + +++VSW+ M+ A +HG
Sbjct: 67 HGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIY 126
Query: 449 HHALQVFARM-VTSGTKPDEITFVGLLSACSHAGLVNQGR-RVFD----SIKGAYNLNLK 502
+L VF T P+E + ACS GL +GR VF +K ++ ++
Sbjct: 127 EESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGRWMVFQLQSFLVKSGFDRDVY 184
Query: 503 VEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKL 562
V + L+D + G ++ A V +P E ++ C G V+ + +L
Sbjct: 185 VG--TLLIDFYLKDGNIDYARLVFDALP--EKSTVTWTTMISGCVKMGRSYVSLQLFYQL 240
Query: 563 LSLEPTSSGGYVL 575
+ + GY+L
Sbjct: 241 ME-DNVVPDGYIL 252
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 137/338 (40%), Gaps = 53/338 (15%)
Query: 36 IFRFLRNFTASISISHDWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAV 95
IFR +R S+ SL + + +T LG ++ +F D + +++I V
Sbjct: 441 IFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGL--MFKYGLNLDIFAGSALIDV 498
Query: 96 YLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNA----------RE-----VF 140
Y + + +F M +D+V ++M GY + + A RE F
Sbjct: 499 YSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTF 558
Query: 141 DNMT------------------------ERNAFSWTSLISGYFRCGRTEEALQLFDQMSE 176
NM E N + +L+ Y +CG E+A + FD +
Sbjct: 559 ANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAAS 618
Query: 177 RSVVTWTTMVSGFAQNGLVDHARRFFDLM----PEKNTIAWTAMVKSYLDNGQFSEGYKL 232
R VV W +++S +A +G A + + M E N I + ++ + G +G K
Sbjct: 619 RDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQ 678
Query: 233 FLEM----PERNVRSWNVMISGCLSANRVDEAIHLFETMPDRN-HVSWTAMVSGLAQNKM 287
F M E + M+S A R+++A L E MP + + W +++SG A+
Sbjct: 679 FELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGN 738
Query: 288 VEVARKYFDIMPF---KDMAAWSAMITAYVDEKLLGEA 322
VE+A ++ KD +++ + Y + + EA
Sbjct: 739 VELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEA 776
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 17/203 (8%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMS----E 114
N + + + G ++A K FD RD V +NS+I+ Y + + A + + M E
Sbjct: 594 NALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIE 653
Query: 115 RDVVAQSAMVDGYAKAGRLDNAREVFDNM----TERNAFSWTSLISGYFRCGRTEEALQL 170
+ + ++ + AG +++ + F+ M E + ++S R GR +A +L
Sbjct: 654 PNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKAREL 713
Query: 171 FDQMSER-SVVTWTTMVSGFAQNG---LVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQF 226
++M + + + W +++SG A+ G L +HA L K++ ++T + Y G +
Sbjct: 714 IEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMW 773
Query: 227 SEGYKLFLEMPERNV-----RSW 244
+E K+ M V RSW
Sbjct: 774 TEAKKVRERMKVEGVVKEPGRSW 796
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 268 bits (686), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 153/494 (30%), Positives = 271/494 (54%), Gaps = 16/494 (3%)
Query: 141 DNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWT------TMVSGFAQNGL 194
+N + FS + ++ R G + +Q+ + + + W+ ++ + + G
Sbjct: 114 ENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGL--WSDLFLQNCLIGLYLKCGC 171
Query: 195 VDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPE--RNVRSWNVMISG-C 251
+ +R+ FD MP+++++++ +M+ Y+ G +LF MP +N+ SWN MISG
Sbjct: 172 LGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYA 231
Query: 252 LSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMIT 311
+++ VD A LF MP+++ +SW +M+ G ++ +E A+ FD+MP +D+ W+ MI
Sbjct: 232 QTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMID 291
Query: 312 AYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLR-SCFRPCVT 370
Y + A LF+ +P ++V +N+++ GYV+N EAL +F M + S P T
Sbjct: 292 GYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDT 351
Query: 371 TMTSIITSCDGMVEIMQA---HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELL 427
T+ ++ + + + +A H ++ F + ALI +YSK G + AMLVFE +
Sbjct: 352 TLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGI 411
Query: 428 KSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGR 487
++K + W AMI A HG G A + ++ KPD+ITFVG+L+ACSH+GLV +G
Sbjct: 412 ENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGL 471
Query: 488 RVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACK 547
F+ ++ + + +++HY C+VD+L R+G + A +++ + P E ++ + L AC
Sbjct: 472 LCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEM-PVEPNDVIWRTFLTACS 530
Query: 548 LHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGF 607
H + + + L+ + YVLLSN YA+ W + +VR MKE+ ++KI G
Sbjct: 531 HHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGC 590
Query: 608 SQIQVKGKNHLFFV 621
S I++ G+ H FFV
Sbjct: 591 SWIELDGRVHEFFV 604
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 201/440 (45%), Gaps = 74/440 (16%)
Query: 53 WS-LRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFK- 110
WS L +N I + + G L +R++FD MP+RD+VSYNSMI Y+K + A +F
Sbjct: 153 WSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDL 212
Query: 111 -AMSERDVVAQSAMVDGYAKAGR-LDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEAL 168
M +++++ ++M+ GYA+ +D A ++F +M E++ SW S+I GY + GR E+A
Sbjct: 213 MPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAK 272
Query: 169 QLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSE 228
LFD M R VVTW TM+ G+A+ G V HA+ FD MP ++ +A+ +M+ Y+ N E
Sbjct: 273 GLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHME 332
Query: 229 GYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQ---- 284
++F +M + + HL +PD + ++ +AQ
Sbjct: 333 ALEIFSDMEKES---------------------HL---LPDDT--TLVIVLPAIAQLGRL 366
Query: 285 NKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGY 344
+K +++ + + A+I Y + A+ +F + K++ WN +I G
Sbjct: 367 SKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGL 426
Query: 345 VRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVT 404
+G A + + + R +P T ++ +C
Sbjct: 427 AIHGLGESAFDMLLQIERLSLKPDDITFVGVLNAC------------------------- 461
Query: 405 NALITLYSKSGDLCSAMLVFELLKSKDVVS-----WTAMIVAYANHGHGHHALQVFARMV 459
S SG + +L FEL++ K + + M+ + G A + M
Sbjct: 462 -------SHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEM- 513
Query: 460 TSGTKPDEITFVGLLSACSH 479
+P+++ + L+ACSH
Sbjct: 514 --PVEPNDVIWRTFLTACSH 531
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 267 bits (683), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 175/541 (32%), Positives = 271/541 (50%), Gaps = 56/541 (10%)
Query: 147 NAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMP 206
+ F T+ + + +C + A ++F++M ER TW M+SGF Q+G D A F M
Sbjct: 86 DVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMR 145
Query: 207 EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVR--------SWNVMISGCLSANRVD 258
+ V + + + F + KL M +R N IS +D
Sbjct: 146 LNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLD 205
Query: 259 EAIHLFETMP--DRNHVSWTAM-----VSGLAQNKM---VEVARKYF--DIMPF------ 300
A +FE + DR VSW +M V G A + + R+ F D+ F
Sbjct: 206 SAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAAS 265
Query: 301 -----------------------KDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIW 337
+D+ A + I+ Y + A LF+++ + W
Sbjct: 266 CQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSW 325
Query: 338 NTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCD--GMVEI---MQAHAMV 392
+I GY G+ EAL LF M++S +P + T+ S+I+ C G +E + A A
Sbjct: 326 TVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARA-D 384
Query: 393 IHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHAL 452
I+ N + NALI +YSK G + A +F+ K VV+WT MI YA +G AL
Sbjct: 385 IYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEAL 444
Query: 453 QVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDM 512
++F++M+ KP+ ITF+ +L AC+H+G + +G F +K YN++ ++HYSC+VD+
Sbjct: 445 KLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDL 504
Query: 513 LGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGG 572
LGR G + EA++++ + ++ D + ALL ACK+H N+K+A + L +LEP +
Sbjct: 505 LGRKGKLEEALELIRNM-SAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAP 563
Query: 573 YVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEI 632
YV ++N YAA WD FA++R MK++N+KK G S IQV GKNH F VGE H + E I
Sbjct: 564 YVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVI 623
Query: 633 Y 633
Y
Sbjct: 624 Y 624
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 128/263 (48%), Gaps = 13/263 (4%)
Query: 240 NVRSWNVMISGCLSANRVDEAIHLFETM------PDRNHVSWTAMVSG-LAQNKMVEVAR 292
+V +WN+ I ++ N E++ LF M P+ + A LA E+
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 293 KYFDIMPF-KDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAG 351
+ PF D+ +A + +V + A ++F +PE++ WN ++ G+ ++G
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD 135
Query: 352 EALRLFILMLRSCFRPCVTTMTSIITSC--DGMVEIMQA-HAMVIHLGFEQNTWVTNALI 408
+A LF M + P T+ ++I S + +++++A HA+ I LG + V N I
Sbjct: 136 KAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWI 195
Query: 409 TLYSKSGDLCSAMLVFELLKSKD--VVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPD 466
+ Y K GDL SA LVFE + D VVSW +M AY+ G A ++ M+ KPD
Sbjct: 196 STYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPD 255
Query: 467 EITFVGLLSACSHAGLVNQGRRV 489
TF+ L ++C + + QGR +
Sbjct: 256 LSTFINLAASCQNPETLTQGRLI 278
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 149/357 (41%), Gaps = 60/357 (16%)
Query: 47 ISISHDWSLRKRNVEITILGRRGKLKEARKLFDEMPQ--RDAVSYNSMIAVYLKNKDVHG 104
I + D + N I+ G+ G L A+ +F+ + + R VS+NSM Y +
Sbjct: 180 IRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFD 239
Query: 105 AETIFKAM---------------------------------------SERDVVAQSAMVD 125
A ++ M +++D+ A + +
Sbjct: 240 AFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFIS 299
Query: 126 GYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQM----SERSVVT 181
Y+K+ +AR +FD MT R SWT +ISGY G +EAL LF M + +VT
Sbjct: 300 MYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVT 359
Query: 182 WTTMVSGFAQNGLVD-----HARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEM 236
+++SG + G ++ AR N + A++ Y G E +F
Sbjct: 360 LLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNT 419
Query: 237 PERNVRSWNVMISGCLSANRVDEAIHLFETMPD----RNHVSWTAMVSGLAQNKMVEVAR 292
PE+ V +W MI+G EA+ LF M D NH+++ A++ A + +E
Sbjct: 420 PEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGW 479
Query: 293 KYFDIMP-----FKDMAAWSAMITAYVDEKLLGEALELF-NLVPEKNVGIWNTIIDG 343
+YF IM + +S M+ + L EALEL N+ + + GIW +++
Sbjct: 480 EYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNA 536
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 191/463 (41%), Gaps = 90/463 (19%)
Query: 74 ARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRL 133
A K+F+ MP+RDA ++N+M++ + ++ A ++F+ M ++ S V ++
Sbjct: 106 AAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASF 165
Query: 134 DNAREVFDNM--------TERNAFSWTSLISGYFRCGRTEEALQLFDQMS--ERSVVTWT 183
+ + ++ + M + + IS Y +CG + A +F+ + +R+VV+W
Sbjct: 166 EKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWN 225
Query: 184 TMVSGFAQNGLVDHARRFFDLM------PEKNT---IAWTAMVKSYLDNGQFSEGYKLFL 234
+M ++ G A + LM P+ +T +A + L G+ + + L
Sbjct: 226 SMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHL 285
Query: 235 EMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKY 294
++++ + N IS + A LF+ M R VSWT M+SG A+ ++ A
Sbjct: 286 G-TDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALAL 344
Query: 295 F--------------------------------------DIMPFK--DMAAWSAMITAYV 314
F DI K ++ +A+I Y
Sbjct: 345 FHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYS 404
Query: 315 DEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTS 374
+ EA ++F+ PEK V W T+I GY NG EAL+LF M+ ++P T +
Sbjct: 405 KCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLA 464
Query: 375 IITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVS 434
++ +C AH+ + G+E + + +Y+ S L + +LL K
Sbjct: 465 VLQAC--------AHSGSLEKGWE----YFHIMKQVYNISPGLDHYSCMVDLLGRK---- 508
Query: 435 WTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSAC 477
G AL++ M KPD + LL+AC
Sbjct: 509 -----------GKLEEALELIRNM---SAKPDAGIWGALLNAC 537
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 3/157 (1%)
Query: 325 LFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVE 384
L+ + +V WN I V + E+L LF M R F P T + +C + +
Sbjct: 8 LYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLAD 67
Query: 385 I---MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVA 441
+ HA +I F + +V A + ++ K + A VFE + +D +W AM+
Sbjct: 68 VGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSG 127
Query: 442 YANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACS 478
+ GH A +F M + PD +T + L+ + S
Sbjct: 128 FCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSAS 164
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 15/200 (7%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDV- 117
N I + + G + EAR +FD P++ V++ +MIA Y N A +F M + D
Sbjct: 397 NALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYK 456
Query: 118 ---VAQSAMVDGYAKAGRLDNAREVFDNMTERNAFS-----WTSLISGYFRCGRTEEALQ 169
+ A++ A +G L+ E F M + S ++ ++ R G+ EEAL+
Sbjct: 457 PNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALE 516
Query: 170 LFDQMSER-SVVTWTTMVSGFAQNGLV----DHARRFFDLMPEKNTIAWTAMVKSYLDNG 224
L MS + W +++ + V A F+L P+ + M Y G
Sbjct: 517 LIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQM-AAPYVEMANIYAAAG 575
Query: 225 QFSEGYKLFLEMPERNVRSW 244
+ ++ M +RN++ +
Sbjct: 576 MWDGFARIRSIMKQRNIKKY 595
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 158/471 (33%), Positives = 254/471 (53%), Gaps = 29/471 (6%)
Query: 183 TTMVSGFAQNGLVDHARRFFDLMPEKN--TIAWTAMVKSYLDNGQFSEGYKLFLEMPERN 240
T ++S + + GLV AR+ F+ P+ + ++ + A++ Y N + ++ +F M E
Sbjct: 92 TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETG 151
Query: 241 VRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPF 300
V +V + G + V E + W L ++ + + D
Sbjct: 152 VSVDSVTMLGLVPLCTVPEYL-------------W------LGRSLHGQCVKGGLD---- 188
Query: 301 KDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILM 360
++A ++ IT Y+ + LF+ +P K + WN +I GY +NG A + L L+ M
Sbjct: 189 SEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQM 248
Query: 361 LRSCFRPCVTTMTSIITSCDGMVEIMQAH---AMVIHLGFEQNTWVTNALITLYSKSGDL 417
S P T+ S+++SC + H +V GF N +V+NA I++Y++ G+L
Sbjct: 249 KSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNL 308
Query: 418 CSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSAC 477
A VF+++ K +VSWTAMI Y HG G L +F M+ G +PD FV +LSAC
Sbjct: 309 AKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSAC 368
Query: 478 SHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEA 537
SH+GL ++G +F ++K Y L EHYSCLVD+LGRAG ++EAM+ + ++ P E D A
Sbjct: 369 SHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESM-PVEPDGA 427
Query: 538 VLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMK 597
V ALLGACK+H N+ +A K++ EP + G YVL+SN Y+ + + ++R M+
Sbjct: 428 VWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMR 487
Query: 598 EKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETG 648
E+ +K G+S ++ KG+ HLF G+RSH Q EE++ L + +M G
Sbjct: 488 ERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAG 538
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 144/326 (44%), Gaps = 33/326 (10%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRD--AVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVA 119
I++ + G + +ARK+F+E PQ +V YN++I+ Y N V A +F+ M E V
Sbjct: 95 ISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSV 154
Query: 120 QSAMVDG---------YAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQL 170
S + G Y GR + + V + A S I+ Y +CG E +L
Sbjct: 155 DSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAV-LNSFITMYMKCGSVEAGRRL 213
Query: 171 FDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLM------PEKNTIAWTAMVKSYLDNG 224
FD+M + ++TW ++SG++QNGL ++ M P+ T+ ++L
Sbjct: 214 FDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAK 273
Query: 225 QFSEGYKLFLE----MPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVS 280
+ +E +P NV N IS + +A +F+ MP ++ VSWTAM+
Sbjct: 274 KIGHEVGKLVESNGFVP--NVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIG 331
Query: 281 GLAQNKMVEVARKYFDIMPFK----DMAAWSAMITAYVDEKLLGEALELFNLVP-----E 331
+ M E+ FD M + D A + +++A L + LELF + E
Sbjct: 332 CYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLE 391
Query: 332 KNVGIWNTIIDGYVRNGEAGEALRLF 357
++ ++D R G EA+
Sbjct: 392 PGPEHYSCLVDLLGRAGRLDEAMEFI 417
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 130/281 (46%), Gaps = 23/281 (8%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDV- 117
N IT+ + G ++ R+LFDEMP + +++N++I+ Y +N + +++ M V
Sbjct: 195 NSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVC 254
Query: 118 --------VAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQ 169
V S G K G + + V N N F + IS Y RCG +A
Sbjct: 255 PDPFTLVSVLSSCAHLGAKKIGH-EVGKLVESNGFVPNVFVSNASISMYARCGNLAKARA 313
Query: 170 LFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQ 225
+FD M +S+V+WT M+ + +G+ + FD M ++ + + ++ + +G
Sbjct: 314 VFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGL 373
Query: 226 FSEGYKLFLEMP-----ERNVRSWNVMISGCLSANRVDEAIHLFETMP-DRNHVSWTAMV 279
+G +LF M E ++ ++ A R+DEA+ E+MP + + W A++
Sbjct: 374 TDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALL 433
Query: 280 SGLAQNKMVEVARKYF-DIMPFK--DMAAWSAMITAYVDEK 317
+K V++A F ++ F+ ++ + M Y D K
Sbjct: 434 GACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSK 474
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 116/505 (22%), Positives = 197/505 (39%), Gaps = 112/505 (22%)
Query: 39 FLRNFTASISISHDWSLRKRNVEITILGRRGKLKEARKLFDEM----PQRDAVSYN---- 90
F+RN + S W++R R L + E+ L+ M DA S+
Sbjct: 7 FVRNSAVAAVASTPWNVRLRE-----LAYQSLFSESISLYRSMLRSGSSPDAFSFPFILK 61
Query: 91 --SMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNA 148
+ +++ + + +H T K E + +A++ Y K G + +AR+VF+ + +
Sbjct: 62 SCASLSLPVSGQQLHCHVT--KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQ 119
Query: 149 FS--WTSLISGYFRCGRTEEALQLFDQMSE--------------------------RS-- 178
S + +LISGY + +A +F +M E RS
Sbjct: 120 LSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLH 179
Query: 179 -----------VVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFS 227
V + ++ + + G V+ RR FD MP K I W A++ Y NG
Sbjct: 180 GQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAY 239
Query: 228 EGYKLFLEMPERNVR----SWNVMISGC--LSANRVDEAI-HLFET---MPDRNHVSWTA 277
+ +L+ +M V + ++S C L A ++ + L E+ +P N A
Sbjct: 240 DVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVP--NVFVSNA 297
Query: 278 MVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIW 337
+S A+ + AR FDIMP K + +W+AMI Y
Sbjct: 298 SISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCY------------------------ 333
Query: 338 NTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC------DGMVEIMQAHAM 391
G GE G L LF M++ RP ++++C D +E+ + AM
Sbjct: 334 -----GMHGMGEIG--LMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFR--AM 384
Query: 392 VIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLK-SKDVVSWTAMIVAYANHGHGHH 450
E + L+ L ++G L AM E + D W A++ A H +
Sbjct: 385 KREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDM 444
Query: 451 ALQVFARMVTSGTKPDEITFVGLLS 475
A FA+++ +P+ I + L+S
Sbjct: 445 AELAFAKVIE--FEPNNIGYYVLMS 467
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 105/268 (39%), Gaps = 51/268 (19%)
Query: 337 WNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGM---VEIMQAHAMVI 393
WN + E++ L+ MLRS P + I+ SC + V Q H V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 394 HLGFEQNTWVTNALITLYSKSGDLCSAMLVFE--LLKSKDVVSWTAMIVAYANHGHGHHA 451
G E +V ALI++Y K G + A VFE S+ V + A+I Y + A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 452 LQVFARMVTSGTKPDEITFVGLLSACS--------------------------------- 478
+F RM +G D +T +GL+ C+
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 479 --HAGLVNQGRRVFD--SIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEI 534
G V GRR+FD +KG N + YS + GL + +++ + S +
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYS-------QNGLAYDVLELYEQMKSSGV 253
Query: 535 --DEAVLVALLGACKLHGNIKVANSIGQ 560
D LV++L +C G K+ + +G+
Sbjct: 254 CPDPFTLVSVLSSCAHLGAKKIGHEVGK 281
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 161/558 (28%), Positives = 281/558 (50%), Gaps = 54/558 (9%)
Query: 133 LDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQM------------------ 174
LD + ++ + N FSW I G+ +E+ L+ QM
Sbjct: 103 LDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVL 162
Query: 175 ----SERSVVTWTTMVSG--------------------FAQNGLVDHARRFFDLMPEKNT 210
++ + + M+ G FA G +++AR+ FD P ++
Sbjct: 163 FKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDL 222
Query: 211 IAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNV----MISGCLSANRVDEAIHLFET 266
++W ++ Y G+ + ++ M V+ +V ++S C ++ +E
Sbjct: 223 VSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEY 282
Query: 267 MPDRNHVSWTAMVSGL----AQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEA 322
+ + +V+ L ++ + AR+ FD + + + +W+ MI+ Y LL +
Sbjct: 283 VKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVS 342
Query: 323 LELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCD-- 380
+LF+ + EK+V +WN +I G V+ +AL LF M S +P TM +++C
Sbjct: 343 RKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQL 402
Query: 381 GMVEI-MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMI 439
G +++ + H + N + +L+ +Y+K G++ A+ VF +++++ +++TA+I
Sbjct: 403 GALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAII 462
Query: 440 VAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNL 499
A HG A+ F M+ +G PDEITF+GLLSAC H G++ GR F +K +NL
Sbjct: 463 GGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNL 522
Query: 500 NLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIG 559
N +++HYS +VD+LGRAGL+ EA ++ ++ P E D AV ALL C++HGN+++
Sbjct: 523 NPQLKHYSIMVDLLGRAGLLEEADRLMESM-PMEADAAVWGALLFGCRMHGNVELGEKAA 581
Query: 560 QKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLF 619
+KLL L+P+ SG YVLL Y W++ + R+ M E+ V+KI G S I+V G F
Sbjct: 582 KKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEF 641
Query: 620 FVGERSHPQVEEIYGFLQ 637
V ++S P+ E+IY L
Sbjct: 642 IVRDKSRPESEKIYDRLH 659
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 189/403 (46%), Gaps = 38/403 (9%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSER--- 115
N I + G ++ ARK+FDE P RD VS+N +I Y K + A ++K M
Sbjct: 195 NASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVK 254
Query: 116 -DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWT-----SLISGYFRCGRTEEALQ 169
D V +V + G L+ +E ++ + E N T +L+ + +CG EA +
Sbjct: 255 PDDVTMIGLVSSCSMLGDLNRGKEFYEYVKE-NGLRMTIPLVNALMDMFSKCGDIHEARR 313
Query: 170 LFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEG 229
+FD + +R++V+WTTM+SG+A+ GL+D +R+ FD M EK+ + W AM+ + + +
Sbjct: 314 IFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDA 373
Query: 230 YKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVE 289
LF EM N + + + CLSA A+ G+ ++ +E
Sbjct: 374 LALFQEMQTSNTKPDEITMIHCLSACS-----------------QLGALDVGIWIHRYIE 416
Query: 290 VARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGE 349
KY + ++A ++++ Y + EAL +F+ + +N + II G +G+
Sbjct: 417 ---KYSLSL---NVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGD 470
Query: 350 AGEALRLFILMLRSCFRPCVTTMTSIITSC--DGMVEIMQAHAMVIHLGFEQNTWVTN-- 405
A A+ F M+ + P T ++++C GM++ + + + F N + +
Sbjct: 471 ASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYS 530
Query: 406 ALITLYSKSGDLCSAMLVFELLK-SKDVVSWTAMIVAYANHGH 447
++ L ++G L A + E + D W A++ HG+
Sbjct: 531 IMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGN 573
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 111/229 (48%), Gaps = 7/229 (3%)
Query: 312 AYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLR-SCF--RPC 368
A + + L ++++ + N+ WN I G+ + E+ L+ MLR C RP
Sbjct: 96 ALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPD 155
Query: 369 VTTMTSIITSCDGMVEIMQAHAMVIH---LGFEQNTWVTNALITLYSKSGDLCSAMLVFE 425
T + C + H ++ H L E + V NA I +++ GD+ +A VF+
Sbjct: 156 HFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFD 215
Query: 426 LLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQ 485
+D+VSW +I Y G A+ V+ M + G KPD++T +GL+S+CS G +N+
Sbjct: 216 ESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNR 275
Query: 486 GRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEI 534
G+ ++ +K L + + + L+DM + G ++EA + + I
Sbjct: 276 GKEFYEYVK-ENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTI 323
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 110/277 (39%), Gaps = 63/277 (22%)
Query: 29 VFSQCQPIFRFLRNFTASISISHDWSLRKRNV-----EITILGRRGKLKEARKLFDEMPQ 83
+FS+C I R F +L KR + I+ R G L +RKLFD+M +
Sbjct: 301 MFSKCGDIHEARRIFD---------NLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEE 351
Query: 84 RDAVSYNSMIAVYLKNKDVHGAETIFKAMSERD--------------------------- 116
+D V +N+MI ++ K A +F+ M +
Sbjct: 352 KDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWI 411
Query: 117 ------------VVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRT 164
V +++VD YAK G + A VF + RN+ ++T++I G G
Sbjct: 412 HRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDA 471
Query: 165 EEALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIA-----WTA 215
A+ F++M + + +T+ ++S G++ R +F M + + ++
Sbjct: 472 STAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSI 531
Query: 216 MVKSYLDNGQFSEGYKLFLEMP-ERNVRSWNVMISGC 251
MV G E +L MP E + W ++ GC
Sbjct: 532 MVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGC 568
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 265 bits (676), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 171/559 (30%), Positives = 281/559 (50%), Gaps = 39/559 (6%)
Query: 123 MVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQLFDQMSERS 178
++ YAK + + M + +AF++ S++ CG T + F ++ S
Sbjct: 115 LIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKA---CGETLDVA--FGRVVHGS 169
Query: 179 VVTWTTMVSGFAQNGLVDH---------ARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEG 229
+ + S + N L+ ARR FD M E++ ++W A++ Y G +SE
Sbjct: 170 IEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEA 229
Query: 230 YKLFLEM----PERNVRSWNVMISGCLSANRVDEAIHLFETMPD-RNHVSWTAMVSGLAQ 284
++LF +M E +V +WN++ GCL A+ L M + + AM+ GL
Sbjct: 230 FELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKA 289
Query: 285 NKMVEVARKYFDIMPFKDMAAW-------SAMITAYVDEKLLGEALELFNLVPEKNVGIW 337
++ R +I +++ + +IT Y K L AL +F E ++ W
Sbjct: 290 CSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTW 349
Query: 338 NTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQA---HAMVIH 394
N+II GY + ++ EA L ML + F+P T+ SI+ C + + H ++
Sbjct: 350 NSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILR 409
Query: 395 LG-FEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQ 453
F+ T + N+L+ +Y+KSG + +A V +L+ +D V++T++I Y N G G AL
Sbjct: 410 RKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALA 469
Query: 454 VFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDML 513
+F M SG KPD +T V +LSACSH+ LV++G R+F ++ Y + ++H+SC+VD+
Sbjct: 470 LFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLY 529
Query: 514 GRAGLVNEAMDVVSTIP--PSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSG 571
GRAG + +A D++ +P PS A LL AC +HGN ++ +KLL ++P + G
Sbjct: 530 GRAGFLAKAKDIIHNMPYKPS---GATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPG 586
Query: 572 GYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEE 631
YVL++N YAA W + A+VR M++ VKK G + I LF VG+ S P+
Sbjct: 587 YYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACN 646
Query: 632 IYGFLQQSLQPLMRETGYT 650
Y L Q + GY
Sbjct: 647 TYPLLDGLNQLMKDNAGYA 665
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/459 (22%), Positives = 194/459 (42%), Gaps = 26/459 (5%)
Query: 105 AETIFKAMSERDVVAQSAMVDGYAKAG--RLDNAREVFDNMTERNAFSWTSLISGY--FR 160
+E++FK++ + + + D + RL ++ V D++ +A S S F
Sbjct: 3 SESLFKSLGH--LASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFL 60
Query: 161 CGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSY 220
G A + + SV+ +V+ ++ L + A+ + + + W ++ SY
Sbjct: 61 AGVQVHAHCISSGVEYHSVLV-PKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASY 119
Query: 221 LDNGQFSEGYKLFLEMPERNVR----SWNVMISGC-----LSANRVDEAIHLFETMPDRN 271
N F E + M + +R ++ ++ C ++ RV +
Sbjct: 120 AKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSL 179
Query: 272 HVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLV-- 329
+V A++S + + + +AR+ FD M +D +W+A+I Y E + EA ELF+ +
Sbjct: 180 YVC-NALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWF 238
Query: 330 --PEKNVGIWNTIIDGYVRNGEAGEALRLFILM--LRSCFRPCVTTMTSIITSCDGMVEI 385
E +V WN I G ++ G AL L M + P + S G + +
Sbjct: 239 SGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRL 298
Query: 386 -MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYAN 444
+ H + IH ++ V N LIT+YSK DL A++VF + + +W ++I YA
Sbjct: 299 GKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQ 358
Query: 445 HGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVE 504
A + M+ +G +P+ IT +L C+ + G+ I
Sbjct: 359 LNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTM 418
Query: 505 HYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALL 543
++ LVD+ ++G + A V + S+ DE +L+
Sbjct: 419 LWNSLVDVYAKSGKIVAAKQVSDLM--SKRDEVTYTSLI 455
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 108/244 (44%), Gaps = 23/244 (9%)
Query: 90 NSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMT----E 145
N++I +Y K KD+ A +F+ E + ++++ GYA+ + + A + M +
Sbjct: 319 NTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQ 378
Query: 146 RNAFSWTSLISGYFRCGRTEEALQLFDQMSERS-----VVTWTTMVSGFAQNGLVDHARR 200
N+ + S++ R + + + R + W ++V +A++G + A++
Sbjct: 379 PNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQ 438
Query: 201 FFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNV----MISGCLSANR 256
DLM +++ + +T+++ Y + G+ LF EM ++ +V ++S C +
Sbjct: 439 VSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKL 498
Query: 257 VDEAIHLFETM-------PDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAA-WSA 308
V E LF M P H S MV + + A+ MP+K A W+
Sbjct: 499 VHEGERLFMKMQCEYGIRPCLQHFS--CMVDLYGRAGFLAKAKDIIHNMPYKPSGATWAT 556
Query: 309 MITA 312
++ A
Sbjct: 557 LLNA 560
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 134/303 (44%), Gaps = 25/303 (8%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQS 121
+ LG +++ D + + S+I K++HG I + D V ++
Sbjct: 262 VGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGL-AIHSSYDGIDNV-RN 319
Query: 122 AMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQM----SER 177
++ Y+K L +A VF E + +W S+ISGY + ++EEA L +M +
Sbjct: 320 TLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQP 379
Query: 178 SVVTWTTMVSGFAQNGLVDHARRFFDLMPEKN-----TIAWTAMVKSYLDNGQFSEGYKL 232
+ +T +++ A+ + H + F + + T+ W ++V Y +G+ ++
Sbjct: 380 NSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQV 439
Query: 233 FLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM------PDRNHVSWTAMVSGLAQNK 286
M +R+ ++ +I G + A+ LF+ M PD HV+ A++S + +K
Sbjct: 440 SDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPD--HVTVVAVLSACSHSK 497
Query: 287 MVEVARKYFDIMPFK-----DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVG-IWNTI 340
+V + F M + + +S M+ Y L +A ++ + +P K G W T+
Sbjct: 498 LVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATL 557
Query: 341 IDG 343
++
Sbjct: 558 LNA 560
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 109/256 (42%), Gaps = 50/256 (19%)
Query: 46 SISISHDWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLK-NKD--- 101
+I S+D RN IT+ + L+ A +F + + ++NS+I+ Y + NK
Sbjct: 306 AIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEA 365
Query: 102 --------------------------------VHGAE---TIFKAMSERD-VVAQSAMVD 125
HG E I + +D + +++VD
Sbjct: 366 SHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVD 425
Query: 126 GYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VT 181
YAK+G++ A++V D M++R+ ++TSLI GY G AL LF +M+ + VT
Sbjct: 426 VYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVT 485
Query: 182 WTTMVSGFAQNGLVDHARRFFDLMPEKNTIA-----WTAMVKSYLDNGQFSEGYKLFLEM 236
++S + + LV R F M + I ++ MV Y G ++ + M
Sbjct: 486 VVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNM 545
Query: 237 PER-NVRSWNVMISGC 251
P + + +W +++ C
Sbjct: 546 PYKPSGATWATLLNAC 561
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 195/653 (29%), Positives = 312/653 (47%), Gaps = 68/653 (10%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKN------------------- 99
N + + R G L +A +F +M +R+ S+N ++ Y K
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 100 -KDVHGAETIFKAMS--------------------ERDVVAQSAMVDGYAKAGRLDNARE 138
DV+ + + E D+ +A++ Y K G + +AR
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 139 VFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV-VTWTTMVSGFAQNGLVDH 197
+FD M R+ SW ++ISGYF G E L+LF M SV T+ S + L+
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 198 ARRFFDLMPEKNTIAWT-------AMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISG 250
R D+ T + ++ + YL+ G + E KLF M +++ SW MISG
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 372
Query: 251 CLSANRVDEAIHLFETM------PDRNHVSWTAMVSGLAQ----NKMVEVARKYFDIMPF 300
D+AI + M PD ++ A++S A + VE+ +
Sbjct: 373 YEYNFLPDKAIDTYRMMDQDSVKPD--EITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Query: 301 KDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILM 360
+ + +I Y K + +AL++F+ +P KNV W +II G N EAL +F+
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQ 489
Query: 361 LRSCFRPCVTTMTSIITSCDGMVEIM---QAHAMVIHLGFEQNTWVTNALITLYSKSGDL 417
++ +P T+T+ + +C + +M + HA V+ G + ++ NAL+ +Y + G +
Sbjct: 490 MKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRM 549
Query: 418 CSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSAC 477
+A F K KDV SW ++ Y+ G G +++F RMV S +PDEITF+ LL C
Sbjct: 550 NTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGC 608
Query: 478 SHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEA 537
S + +V QG F ++ Y + ++HY+C+VD+LGRAG + EA + +P + D A
Sbjct: 609 SKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTP-DPA 666
Query: 538 VLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMK 597
V ALL AC++H I + Q + L+ S G Y+LL N YA +W E A+VR+ MK
Sbjct: 667 VWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMK 726
Query: 598 EKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYT 650
E + +G S ++VKGK H F ++ HPQ +EI L+ + M E G T
Sbjct: 727 ENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEK-MSEVGLT 778
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 120/506 (23%), Positives = 213/506 (42%), Gaps = 78/506 (15%)
Query: 69 GKLKEARKLFDEMPQ-RDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGY 127
GKL+EA KL + M + R AV + +A+ + E K S +A S+M
Sbjct: 73 GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYS----IALSSMSSLG 128
Query: 128 AKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVS 187
+ G NAF ++ + R G +A +F +MSER++ +W +V
Sbjct: 129 VELG---------------NAF-----LAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVG 168
Query: 188 GFAQNGLVDHARRFFDLM-------PEKNTIAWT-------------------------- 214
G+A+ G D A + M P+ T
Sbjct: 169 GYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYE 228
Query: 215 -------AMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM 267
A++ Y+ G LF MP R++ SWN MISG E + LF M
Sbjct: 229 LDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAM 288
Query: 268 P----DRNHVSWTAMVSG---LAQNKMVEVARKYFDIMPFK-DMAAWSAMITAYVDEKLL 319
D + ++ T+++S L ++ Y F D++ +++ Y++
Sbjct: 289 RGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSW 348
Query: 320 GEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC 379
EA +LF+ + K++ W T+I GY N +A+ + +M + +P T+ +++++C
Sbjct: 349 REAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSAC 408
Query: 380 DGMVEI---MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWT 436
+ ++ ++ H + I V N LI +YSK + A+ +F + K+V+SWT
Sbjct: 409 ATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWT 468
Query: 437 AMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGA 496
++I + AL +F R + +P+ IT L+AC+ G + G+ + +
Sbjct: 469 SIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRT 527
Query: 497 YNLNLKVEHYSCLVDMLGRAGLVNEA 522
+ L + L+DM R G +N A
Sbjct: 528 -GVGLDDFLPNALLDMYVRCGRMNTA 552
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 179/676 (26%), Positives = 317/676 (46%), Gaps = 82/676 (12%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVV 118
N + + + G K+FD + +R+ VS+NS+I+ + A F+ M + +V
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVE 196
Query: 119 AQSAMVDGYAKAGR-------LDNAREVFD---NMTERNAFSWTSLISGYFRCGRTEEAL 168
S + A L ++V E N+F +L++ Y + G+ +
Sbjct: 197 PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSK 256
Query: 169 QLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFF----------------DLMP------ 206
L R +VTW T++S QN + A + ++P
Sbjct: 257 VLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 316
Query: 207 ------------------EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMI 248
++N+ +A+V Y + Q G ++F M +R + WN MI
Sbjct: 317 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 376
Query: 249 SGCLSANRVDEAIHLFETMPDR-----NHVSWTAMVSGLAQNKMVE--------VARKYF 295
+G EA+ LF M + N + +V ++ V ++
Sbjct: 377 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL 436
Query: 296 DIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALR 355
D +D + ++ Y + A+ +F + ++++ WNT+I GYV + +AL
Sbjct: 437 D----RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALL 492
Query: 356 LFILML-----------RSCFRPCVTTMTSIITSCDGMVEIMQA---HAMVIHLGFEQNT 401
L M R +P T+ +I+ SC + + + HA I +
Sbjct: 493 LLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDV 552
Query: 402 WVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTS 461
V +AL+ +Y+K G L + VF+ + K+V++W +I+AY HG+G A+ + M+
Sbjct: 553 AVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQ 612
Query: 462 GTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNE 521
G KP+E+TF+ + +ACSH+G+V++G R+F +K Y + +HY+C+VD+LGRAG + E
Sbjct: 613 GVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKE 672
Query: 522 AMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYA 581
A +++ +P +LLGA ++H N+++ Q L+ LEP + YVLL+N Y+
Sbjct: 673 AYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYS 732
Query: 582 AEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQ 641
+ WD+ +VR+ MKE+ V+K G S I+ + H F G+ SHPQ E++ G+L ++L
Sbjct: 733 SAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYL-ETLW 791
Query: 642 PLMRETGYTPENSLLI 657
MR+ GY P+ S ++
Sbjct: 792 ERMRKEGYVPDTSCVL 807
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 210/475 (44%), Gaps = 49/475 (10%)
Query: 117 VVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLF----D 172
V + +V+ Y K G +VFD ++ERN SW SLIS + E AL+ F D
Sbjct: 133 VTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLD 192
Query: 173 QMSERSVVTWTTMVSGFAQ----NGLV--DHARRFFDLMPEKNTIAWTAMVKSYLDNGQF 226
+ E S T ++V+ + GL+ + E N+ +V Y G+
Sbjct: 193 ENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKL 252
Query: 227 SEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM------PDRNHVSWTAMVS 280
+ L R++ +WN ++S ++ EA+ M PD +S S
Sbjct: 253 ASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTIS-----S 307
Query: 281 GLAQNKMVEVARKYFDIMPF--------KDMAAWSAMITAYVDEKLLGEALELFNLVPEK 332
L +E+ R ++ + ++ SA++ Y + K + +F+ + ++
Sbjct: 308 VLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDR 367
Query: 333 NVGIWNTIIDGYVRNGEAGEALRLFILMLRSC-FRPCVTTMTSIITSC--DGMVEIMQA- 388
+G+WN +I GY +N EAL LFI M S TTM ++ +C G +A
Sbjct: 368 KIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAI 427
Query: 389 HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHG 448
H V+ G +++ +V N L+ +YS+ G + AM +F ++ +D+V+W MI Y H
Sbjct: 428 HGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHH 487
Query: 449 H------HALQVFARMVTSGT-----KPDEITFVGLLSACSHAGLVNQGRRVFD-SIKGA 496
H +Q R V+ G KP+ IT + +L +C+ + +G+ + +IK
Sbjct: 488 EDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN- 546
Query: 497 YNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGN 551
NL V S LVDM + G + + V IP + ++ + A +HGN
Sbjct: 547 -NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIM--AYGMHGN 598
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 111/276 (40%), Gaps = 72/276 (26%)
Query: 56 RKRNVEITIL---GRRGKLKEARKLFDEMPQRDAVSYNSMIAVYL--------------- 97
R R V+ T++ R GK+ A ++F +M RD V++N+MI Y+
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 497
Query: 98 -------------------------------------KNKDVHGAETIFKAMSERDVVAQ 120
K K++H K DV
Sbjct: 498 QNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA--IKNNLATDVAVG 555
Query: 121 SAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV- 179
SA+VD YAK G L +R+VFD + ++N +W +I Y G +EA+ L M + V
Sbjct: 556 SALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVK 615
Query: 180 ---VTWTTMVSGFAQNGLVDHARRFFDLMP-----EKNTIAWTAMVKSYLDNGQFSEGYK 231
VT+ ++ + + +G+VD R F +M E ++ + +V G+ E Y+
Sbjct: 616 PNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQ 675
Query: 232 LFLEMPE--RNVRSWNVMISGCLSANRVDEAIHLFE 265
L MP +W S L A+R+ + + E
Sbjct: 676 LMNMMPRDFNKAGAW----SSLLGASRIHNNLEIGE 707
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 337 WNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI---MQAHAMVI 393
W ++ VR+ EA+ ++ M+ +P +++ + + ++ Q HA V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 394 HLGFEQNT-WVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHAL 452
G+ ++ V N L+ LY K GD + VF+ + ++ VSW ++I + + AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 453 QVFARMVTSGTKPDEITFVGLLSACSH 479
+ F M+ +P T V +++ACS+
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSN 211
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 155/455 (34%), Positives = 248/455 (54%), Gaps = 14/455 (3%)
Query: 216 MVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMP------D 269
+V YL G KLF EMPER++ SWN +ISG + + + M
Sbjct: 72 LVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFR 131
Query: 270 RNHVSWTAMVSGLAQNKMVEVARKYFD-IMPF---KDMAAWSAMITAYVDEKLLGEALEL 325
N V++ +M+S E R +M F +++ +A I Y L + +L
Sbjct: 132 PNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKL 191
Query: 326 FNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCD--GMV 383
F + KN+ WNT+I +++NG A + L F + R P T +++ SC+ G+V
Sbjct: 192 FEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVV 251
Query: 384 EIMQA-HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAY 442
+ Q H +++ GF N +T AL+ LYSK G L + VF + S D ++WTAM+ AY
Sbjct: 252 RLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAY 311
Query: 443 ANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLK 502
A HG G A++ F MV G PD +TF LL+ACSH+GLV +G+ F+++ Y ++ +
Sbjct: 312 ATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPR 371
Query: 503 VEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKL 562
++HYSC+VD+LGR+GL+ +A ++ + P E V ALLGAC+++ + ++ ++L
Sbjct: 372 LDHYSCMVDLLGRSGLLQDAYGLIKEM-PMEPSSGVWGALLGACRVYKDTQLGTKAAERL 430
Query: 563 LSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVG 622
LEP YV+LSN Y+A W + +++R MK+K + + SG S I+ K H F VG
Sbjct: 431 FELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVG 490
Query: 623 ERSHPQVEEIYGFLQQSLQPLMRETGYTPENSLLI 657
+ SHP+ E+I L++ + + E GY + ++
Sbjct: 491 DWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVL 525
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 144/332 (43%), Gaps = 69/332 (20%)
Query: 74 ARKLFDEMPQRDAVSYNSMIA--------------------------------------- 94
A KLFDEMP+RD VS+NS+I+
Sbjct: 85 AEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISAC 144
Query: 95 VYLKNKD----VHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFS 150
VY +K+ +HG F + E VV +A ++ Y K G L ++ ++F++++ +N S
Sbjct: 145 VYGGSKEEGRCIHGLVMKFGVLEEVKVV--NAFINWYGKTGDLTSSCKLFEDLSIKNLVS 202
Query: 151 WTSLISGYFRCGRTEEALQLFDQMSER-----SVVTWTTMVSGFAQNGLVDHARRFFDLM 205
W ++I + + G E+ L F+ MS R T+ ++ G+V A+ L+
Sbjct: 203 WNTMIVIHLQNGLAEKGLAYFN-MSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLI 261
Query: 206 P----EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAI 261
N TA++ Y G+ + +F E+ + +W M++ + +AI
Sbjct: 262 MFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAI 321
Query: 262 HLFETM------PDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFK-----DMAAWSAMI 310
FE M PD HV++T +++ + + +VE + YF+ M + + +S M+
Sbjct: 322 KHFELMVHYGISPD--HVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMV 379
Query: 311 TAYVDEKLLGEALELFNLVP-EKNVGIWNTII 341
LL +A L +P E + G+W ++
Sbjct: 380 DLLGRSGLLQDAYGLIKEMPMEPSSGVWGALL 411
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 130/297 (43%), Gaps = 20/297 (6%)
Query: 108 IFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEA 167
+ K++S R +V Y + G A ++FD M ER+ SW SLISGY G +
Sbjct: 57 VVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKC 116
Query: 168 LQLFDQMSERSV------VTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYL 221
++ +M V VT+ +M+S G + R L+ + + +V +++
Sbjct: 117 FEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFI 176
Query: 222 D----NGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNH----V 273
+ G + KLF ++ +N+ SWN MI L ++ + F H
Sbjct: 177 NWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQA 236
Query: 274 SWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVD--EKL--LGEALELFNLV 329
++ A++ +V +A+ ++ F + + TA +D KL L ++ +F+ +
Sbjct: 237 TFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEI 296
Query: 330 PEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC--DGMVE 384
+ W ++ Y +G +A++ F LM+ P T T ++ +C G+VE
Sbjct: 297 TSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVE 353
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 123/279 (44%), Gaps = 59/279 (21%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKN------------------- 99
N I G+ G L + KLF+++ ++ VS+N+MI ++L+N
Sbjct: 173 NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHE 232
Query: 100 ----------------------KDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAR 137
+ +HG +F S + +A++D Y+K GRL+++
Sbjct: 233 PDQATFLAVLRSCEDMGVVRLAQGIHGL-IMFGGFSGNKCIT-TALLDLYSKLGRLEDSS 290
Query: 138 EVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNG 193
VF +T ++ +WT++++ Y G +A++ F+ M + VT+T +++ + +G
Sbjct: 291 TVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSG 350
Query: 194 LVDHARRFFDLMPEKNTI-----AWTAMVKSYLDNGQFSEGYKLFLEMP-ERNVRSWNVM 247
LV+ + +F+ M ++ I ++ MV +G + Y L EMP E + W +
Sbjct: 351 LVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGAL 410
Query: 248 ISGCLSANRVD----EAIHLFETMP--DRNHVSWTAMVS 280
+ C A LFE P RN+V + + S
Sbjct: 411 LGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYS 449
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 69/122 (56%), Gaps = 4/122 (3%)
Query: 369 VTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSG-DLCSAMLVFELL 427
V+++ + + SC + H V+ ++ ++ + L+ Y + G D+C+ L F+ +
Sbjct: 34 VSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKL-FDEM 92
Query: 428 KSKDVVSWTAMIVAYANHGHGHHALQVFARMVTS--GTKPDEITFVGLLSACSHAGLVNQ 485
+D+VSW ++I Y+ G+ +V +RM+ S G +P+E+TF+ ++SAC + G +
Sbjct: 93 PERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEE 152
Query: 486 GR 487
GR
Sbjct: 153 GR 154
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 163/525 (31%), Positives = 275/525 (52%), Gaps = 31/525 (5%)
Query: 132 RLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQ 191
RLD A M E N F + +L G+ C +L+L+ +M SV + S +
Sbjct: 820 RLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVK 879
Query: 192 NGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGC 251
A RF + + W +F G+ +V+ +I
Sbjct: 880 AS--SFASRFGESLQAH---IW-----------KFGFGF---------HVKIQTTLIDFY 914
Query: 252 LSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMIT 311
+ R+ EA +F+ MP+R+ ++WT MVS + ++ A + M K+ A + +I
Sbjct: 915 SATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLIN 974
Query: 312 AYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTT 371
Y+ L +A LFN +P K++ W T+I GY +N EA+ +F M+ P T
Sbjct: 975 GYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVT 1034
Query: 372 MTSIITSCD--GMVEI-MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLK 428
M+++I++C G++EI + H + GF + ++ +AL+ +YSK G L A+LVF L
Sbjct: 1035 MSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLP 1094
Query: 429 SKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRR 488
K++ W ++I A HG AL++FA+M KP+ +TFV + +AC+HAGLV++GRR
Sbjct: 1095 KKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRR 1154
Query: 489 VFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKL 548
++ S+ Y++ VEHY +V + +AGL+ EA++++ + E + + ALL C++
Sbjct: 1155 IYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNM-EFEPNAVIWGALLDGCRI 1213
Query: 549 HGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKI-SGF 607
H N+ +A KL+ LEP +SG Y LL + YA + +W + A++R RM+E ++KI G
Sbjct: 1214 HKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGT 1273
Query: 608 SQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPE 652
S I++ ++HLF ++SH +E+ L + + M GY E
Sbjct: 1274 SSIRIDKRDHLFAAADKSHSASDEVCLLLDE-IYDQMGLAGYVQE 1317
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 164/332 (49%), Gaps = 36/332 (10%)
Query: 117 VVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSE 176
V Q+ ++D Y+ GR+ AR+VFD M ER+ +WT+++S Y R + A L +QMSE
Sbjct: 904 VKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSE 963
Query: 177 RSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEM 236
++ T +++G+ G ++ A F+ MP K+ I+WT M+K Y N ++ E +F +M
Sbjct: 964 KNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKM 1023
Query: 237 PERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARK--- 293
E + +PD V+ + ++S A ++E+ ++
Sbjct: 1024 MEEGI-------------------------IPDE--VTMSTVISACAHLGVLEIGKEVHM 1056
Query: 294 YFDIMPFK-DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGE 352
Y F D+ SA++ Y L AL +F +P+KN+ WN+II+G +G A E
Sbjct: 1057 YTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQE 1116
Query: 353 ALRLFILMLRSCFRPCVTTMTSIITSCD--GMVEIMQA--HAMVIHLGFEQNTWVTNALI 408
AL++F M +P T S+ T+C G+V+ + +M+ N ++
Sbjct: 1117 ALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMV 1176
Query: 409 TLYSKSGDLCSAM-LVFELLKSKDVVSWTAMI 439
L+SK+G + A+ L+ + + V W A++
Sbjct: 1177 HLFSKAGLIYEALELIGNMEFEPNAVIWGALL 1208
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 149/293 (50%), Gaps = 18/293 (6%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYA 128
G+++EARK+FDEMP+RD +++ +M++ Y + D+ A ++ MSE++ + +++GY
Sbjct: 918 GRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYM 977
Query: 129 KAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTT 184
G L+ A +F+ M ++ SWT++I GY + R EA+ +F +M E + VT +T
Sbjct: 978 GLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMST 1037
Query: 185 MVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFSEGYKLFLEMPERN 240
++S A G+++ + + + +A+V Y G +F +P++N
Sbjct: 1038 VISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKN 1097
Query: 241 VRSWNVMISGCLSANRVDEAIHLFETMP----DRNHVSWTAMVSGLAQNKMVEVARKYF- 295
+ WN +I G + EA+ +F M N V++ ++ + +V+ R+ +
Sbjct: 1098 LFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYR 1157
Query: 296 ----DIMPFKDMAAWSAMITAYVDEKLLGEALELF-NLVPEKNVGIWNTIIDG 343
D ++ + M+ + L+ EALEL N+ E N IW ++DG
Sbjct: 1158 SMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDG 1210
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 5/145 (3%)
Query: 301 KDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILM 360
+D + ITA K L A+ + E NV ++N + G+V +L L++ M
Sbjct: 803 QDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRM 862
Query: 361 LRSCFRPCVTTMTSIITS---CDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDL 417
LR P T +S++ + E +QAH + GF + + LI YS +G +
Sbjct: 863 LRDSVSPSSYTYSSLVKASSFASRFGESLQAH--IWKFGFGFHVKIQTTLIDFYSATGRI 920
Query: 418 CSAMLVFELLKSKDVVSWTAMIVAY 442
A VF+ + +D ++WT M+ AY
Sbjct: 921 REARKVFDEMPERDDIAWTTMVSAY 945
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 262 bits (669), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 172/559 (30%), Positives = 293/559 (52%), Gaps = 51/559 (9%)
Query: 135 NAREVFDNMTER-NAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNG 193
N +F+ ++ + FSW S+I+ R G + EAL F M R + + T S F
Sbjct: 27 NLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSM--RKLSLYPTR-SSFP--C 81
Query: 194 LVDHARRFFDLMPEKNT-------------IAWTAMVKSYLDNGQFSEGYKLFLEMPERN 240
+ FD+ K T +A++ Y G+ + K+F E+P+RN
Sbjct: 82 AIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRN 141
Query: 241 VRSWNVMISGC-LSANRVDEAIHLFETM-------PDRNHVSWTAMVS-----------G 281
+ SW MI G L+ N +D A+ LF+ + D + +VS G
Sbjct: 142 IVSWTSMIRGYDLNGNALD-AVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKG 200
Query: 282 LAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVD--EKLLGEALELFNLVPEKNVGIWNT 339
L ++ V ++ FD + ++ + ++ AY E + A ++F+ + +K+ +N+
Sbjct: 201 LTESIHSFVIKRGFD----RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNS 256
Query: 340 IIDGYVRNGEAGEALRLFILMLRS---CFRPCVTTMTSIITSCDGMVEIMQA-HAMVIHL 395
I+ Y ++G + EA +F ++++ F + + S G + I + H VI +
Sbjct: 257 IMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM 316
Query: 396 GFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVF 455
G E + V ++I +Y K G + +A F+ +K+K+V SWTAMI Y HGH AL++F
Sbjct: 317 GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELF 376
Query: 456 ARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGR 515
M+ SG +P+ ITFV +L+ACSHAGL +G R F+++KG + + +EHY C+VD+LGR
Sbjct: 377 PAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGR 436
Query: 516 AGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVL 575
AG + +A D++ + D + +LL AC++H N+++A +L L+ ++ G Y+L
Sbjct: 437 AGFLQKAYDLIQRMKMKP-DSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYML 495
Query: 576 LSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGF 635
LS+ YA +W + +VR MK + + K GFS +++ G+ H+F +G+ HPQ E+IY F
Sbjct: 496 LSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEF 555
Query: 636 LQQSLQPLMRETGYTPENS 654
L + + L+ E GY S
Sbjct: 556 LAELNRKLL-EAGYVSNTS 573
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 109/458 (23%), Positives = 186/458 (40%), Gaps = 104/458 (22%)
Query: 59 NVEITILGRRGKLKEARKLFDEM------PQRD----AVSYNSMIAVYLKNKDVHGAETI 108
N I L R G EA F M P R A+ S + K H +
Sbjct: 45 NSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFV 104
Query: 109 FKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEAL 168
F S D+ SA++ Y+ G+L++AR+VFD + +RN SWTS+I GY G +A+
Sbjct: 105 FGYQS--DIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAV 162
Query: 169 QLF----------------DQMS-----------------------------ERSVVTWT 183
LF D M +R V
Sbjct: 163 SLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGN 222
Query: 184 TMVSGFAQNGL--VDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNV 241
T++ +A+ G V AR+ FD + +K+ +++ +++ Y +G +E +++F + + V
Sbjct: 223 TLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKV 282
Query: 242 RSWN-VMISGCL------SANRVDEAIH--LFETMPDRNHVSWTAMVSGLAQNKMVEVAR 292
++N + +S L A R+ + IH + + + + T+++ + VE AR
Sbjct: 283 VTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETAR 342
Query: 293 KYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGE 352
K FD M K++ +W+AMI GY +G A +
Sbjct: 343 KAFDRMKNKNVRSWTAMIA-------------------------------GYGMHGHAAK 371
Query: 353 ALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQA----HAMVIHLGFEQNTWVTNALI 408
AL LF M+ S RP T S++ +C ++ +AM G E ++
Sbjct: 372 ALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMV 431
Query: 409 TLYSKSGDLCSAMLVFELLKSK-DVVSWTAMIVAYANH 445
L ++G L A + + +K K D + W++++ A H
Sbjct: 432 DLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIH 469
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 114/249 (45%), Gaps = 52/249 (20%)
Query: 66 GRRGKLKEARKLFDEMPQRDAVSYNSMIAVY----------------LKNKDV------- 102
G G + ARK+FD++ +D VSYNS+++VY +KNK V
Sbjct: 231 GGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITL 290
Query: 103 ---------HGAETIFKAMS--------ERDVVAQSAMVDGYAKAGRLDNAREVFDNMTE 145
GA I K + E DV+ ++++D Y K GR++ AR+ FD M
Sbjct: 291 STVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKN 350
Query: 146 RNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHARRF 201
+N SWT++I+GY G +AL+LF M + V +T+ ++++ + GL R+
Sbjct: 351 KNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRW 410
Query: 202 FDLMP-----EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANR 256
F+ M E + MV G + Y L M ++ +++ S L+A R
Sbjct: 411 FNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM---KMKPDSIIWSSLLAACR 467
Query: 257 VDEAIHLFE 265
+ + + L E
Sbjct: 468 IHKNVELAE 476
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 261 bits (668), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 132/353 (37%), Positives = 220/353 (62%), Gaps = 6/353 (1%)
Query: 291 ARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVP--EKNVGIWNTIIDGYVRNG 348
ARK FD M KD+ W+A++ Y + EA L ++P +N W +I GY ++G
Sbjct: 170 ARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSG 229
Query: 349 EAGEALRLFILMLRSCFRPCVTTMTSIITSCD--GMVEIMQ-AHAMVIHLGFEQNTWVTN 405
A EA+ +F ML P T+ +++++C G +E+ + + V H G + + N
Sbjct: 230 RASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNN 289
Query: 406 ALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKP 465
A+I +Y+KSG++ A+ VFE + ++VV+WT +I A HGHG AL +F RMV +G +P
Sbjct: 290 AVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRP 349
Query: 466 DEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDV 525
+++TF+ +LSACSH G V+ G+R+F+S++ Y ++ +EHY C++D+LGRAG + EA +V
Sbjct: 350 NDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEV 409
Query: 526 VSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQ 585
+ ++ P + + A+ +LL A +H ++++ +L+ LEP +SG Y+LL+N Y+ +
Sbjct: 410 IKSM-PFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGR 468
Query: 586 WDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQ 638
WDE +R MK VKK++G S I+V+ + + F G+ +HPQVE I+ LQ+
Sbjct: 469 WDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQE 521
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 168/354 (47%), Gaps = 37/354 (10%)
Query: 152 TSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMP--EKN 209
T LI YF CG +A ++FD+M + V W +++G+ + G +D AR ++MP +N
Sbjct: 155 TGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRN 214
Query: 210 TIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPD 269
++WT ++ Y +G+ SE ++F M NV V + LSA ++ L E +
Sbjct: 215 EVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERIC- 273
Query: 270 RNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLV 329
++V M ++ N V DM A S IT +AL++F V
Sbjct: 274 -SYVDHRGMNRAVSLNNAV------------IDMYAKSGNIT---------KALDVFECV 311
Query: 330 PEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCD--GMVEIMQ 387
E+NV W TII G +G EAL +F M+++ RP T +I+++C G V++ +
Sbjct: 312 NERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGK 371
Query: 388 A--HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSK-DVVSWTAMIVAYAN 444
++M G N +I L ++G L A V + + K + W +++ A
Sbjct: 372 RLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAA--- 428
Query: 445 HGHGHHALQVFARMVTSGTK--PDEI-TFVGLLSACSHAGLVNQGRRVFDSIKG 495
+ HH L++ R ++ K P+ ++ L + S+ G ++ R + + +KG
Sbjct: 429 -SNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKG 481
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 158/348 (45%), Gaps = 46/348 (13%)
Query: 27 RRVFSQC-QP-IFRFLRNFTASISISHDWSLRKRNVEITILG----------------RR 68
R++++ C +P F F ++ +S W R+ + ++ + G
Sbjct: 105 RKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSC 164
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMS--ERDVVAQSAMVDG 126
G L +ARK+FDEM +D +N+++A Y K ++ A ++ + M R+ V+ + ++ G
Sbjct: 165 GGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISG 224
Query: 127 YAKAGRLDNAREVFDNM----TERNAFSWTSLISGYFRCGRTEEALQLFDQMSE----RS 178
YAK+GR A EVF M E + + +++S G E ++ + R+
Sbjct: 225 YAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRA 284
Query: 179 VVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPE 238
V ++ +A++G + A F+ + E+N + WT ++ +G +E +F M +
Sbjct: 285 VSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVK 344
Query: 239 RNVRSWNV----MISGCLSANRVDEAIHLFETM-------PDRNHVSWTAMVSGLAQNKM 287
VR +V ++S C VD LF +M P+ H + M+ L +
Sbjct: 345 AGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEH--YGCMIDLLGRAGK 402
Query: 288 VEVARKYFDIMPFKDMAA-WSAMITA---YVDEKLLGEAL-ELFNLVP 330
+ A + MPFK AA W +++ A + D +L AL EL L P
Sbjct: 403 LREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEP 450
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 142/306 (46%), Gaps = 31/306 (10%)
Query: 75 RKLFDEMPQRDAVSYNSMIAVYLKNKDV------HGAETIFKAMSERDVVAQSAMVDGYA 128
RKL+ + D ++ ++ + ++ DV HG +F S VV + ++ Y
Sbjct: 105 RKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVV--TGLIQMYF 162
Query: 129 KAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMS--ERSVVTWTTMV 186
G L +AR++FD M ++ W +L++GY + G +EA L + M R+ V+WT ++
Sbjct: 163 SCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVI 222
Query: 187 SGFAQNGLVDHARRFFDLM----PEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERN-- 240
SG+A++G A F M E + + A++ + D G G ++ + R
Sbjct: 223 SGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMN 282
Query: 241 --VRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQ-----------NKM 287
V N +I + + +A+ +FE + +RN V+WT +++GLA N+M
Sbjct: 283 RAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRM 342
Query: 288 VEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRN 347
V+ + D+ ++A S + + ++L + + P N+ + +ID R
Sbjct: 343 VKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHP--NIEHYGCMIDLLGRA 400
Query: 348 GEAGEA 353
G+ EA
Sbjct: 401 GKLREA 406
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 261 bits (668), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 158/481 (32%), Positives = 262/481 (54%), Gaps = 12/481 (2%)
Query: 188 GFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVR----S 243
+A +G + H+ F + + +TA + + NG + + L++++ + +
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 244 WNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDM 303
++ ++ C + + H+ + + T +V A+ V A+K FD MP + +
Sbjct: 133 FSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSL 192
Query: 304 AAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLF-ILMLR 362
+ +AMIT Y + + A LF+ + E+++ WN +IDGY ++G +AL LF L+
Sbjct: 193 VSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAE 252
Query: 363 SCFRPCVTTMTSIITSCD--GMVEIMQ-AHAMVIHLGFEQNTWVTNALITLYSKSGDLCS 419
+P T+ + +++C G +E + H V N V LI +YSK G L
Sbjct: 253 GKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEE 312
Query: 420 AMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMV-TSGTKPDEITFVGLLSACS 478
A+LVF KD+V+W AMI YA HG+ AL++F M +G +P +ITF+G L AC+
Sbjct: 313 AVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACA 372
Query: 479 HAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAV 538
HAGLVN+G R+F+S+ Y + K+EHY CLV +LGRAG + A + + + + D +
Sbjct: 373 HAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMN-MDADSVL 431
Query: 539 LVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKE 598
++LG+CKLHG+ + I + L+ L +SG YVLLSN YA+ ++ A+VR MKE
Sbjct: 432 WSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKE 491
Query: 599 KNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPE-NSLLI 657
K + K G S I+++ K H F G+R H + +EIY L++ + ++ GY P N++L
Sbjct: 492 KGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRK-ISERIKSHGYVPNTNTVLQ 550
Query: 658 D 658
D
Sbjct: 551 D 551
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 120/269 (44%), Gaps = 51/269 (18%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQS 121
+ + + G + A+K+FD MP+R VS +MI Y K +V A +F +M ERD+V+ +
Sbjct: 168 VDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWN 227
Query: 122 AMVDGYAKAGRLDNAREVF-----------DNMTERNAFS------------W------- 151
M+DGYA+ G ++A +F D +T A S W
Sbjct: 228 VMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKS 287
Query: 152 ----------TSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRF 201
T LI Y +CG EEA+ +F+ + +V W M++G+A +G A R
Sbjct: 288 SRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRL 347
Query: 202 FDLMP-----EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSA-- 254
F+ M + I + +++ G +EG ++F M + + GCL +
Sbjct: 348 FNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLL 407
Query: 255 NRVDEAIHLFETMP----DRNHVSWTAMV 279
R + +ET+ D + V W++++
Sbjct: 408 GRAGQLKRAYETIKNMNMDADSVLWSSVL 436
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 142/324 (43%), Gaps = 64/324 (19%)
Query: 85 DAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMT 144
D ++ VY K DV A+ +F M ER +V+ +AM+ YAK G ++ AR +FD+M
Sbjct: 160 DPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMC 219
Query: 145 ERNAFSWTSLISGYFRCGRTEEALQLFDQM--------SERSVVT--------------- 181
ER+ SW +I GY + G +AL LF ++ E +VV
Sbjct: 220 ERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGR 279
Query: 182 W-----------------TTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNG 224
W T ++ +++ G ++ A F+ P K+ +AW AM+ Y +G
Sbjct: 280 WIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHG 339
Query: 225 QFSEGYKLFLEMPE-RNVRSWNVMISG----CLSANRVDEAIHLFETM-------PDRNH 272
+ +LF EM ++ ++ G C A V+E I +FE+M P H
Sbjct: 340 YSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEH 399
Query: 273 VSWTAMVSGLAQNKMVEVARKYFDIMPFK-DMAAWSAMITA------YVDEKLLGEALEL 325
+ +VS L + ++ A + M D WS+++ + +V K + E L
Sbjct: 400 --YGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIG 457
Query: 326 FNLVPEKNVGIWNTIIDGYVRNGE 349
N+ KN GI+ + + Y G+
Sbjct: 458 LNI---KNSGIYVLLSNIYASVGD 478
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 151/485 (31%), Positives = 254/485 (52%), Gaps = 14/485 (2%)
Query: 139 VFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVV-----TWTTMVSGFAQNG 193
VF+ + + W LI GY E + + +M + T+ ++ + NG
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 194 LVDHARRFFDLMP----EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMIS 249
V L+ +K+ + T+ V Y K+F EMPERN SW ++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 250 GCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAM 309
+ + ++EA +F+ MP+RN SW A+V GL ++ + A+K FD MP +D+ ++++M
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSM 244
Query: 310 ITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCV 369
I Y + A +LF +V W+ +I GY +NG+ EA ++F M +P
Sbjct: 245 IDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDE 304
Query: 370 TTMTSIITSCD--GMVEIMQAHAMVIHLGFEQ--NTWVTNALITLYSKSGDLCSAMLVFE 425
M ++++C G E+ + +H + + +V ALI + +K G + A +FE
Sbjct: 305 FIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFE 364
Query: 426 LLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQ 485
+ +D+VS+ +M+ A HG G A+++F +MV G PDE+ F +L C + LV +
Sbjct: 365 EMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEE 424
Query: 486 GRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGA 545
G R F+ ++ Y++ +HYSC+V++L R G + EA +++ ++ P E + +LLG
Sbjct: 425 GLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSM-PFEAHASAWGSLLGG 483
Query: 546 CKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKIS 605
C LHGN ++A + + L LEP S+G YVLLSN YAA ++W + A +R +M E + KI
Sbjct: 484 CSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKIC 543
Query: 606 GFSQI 610
G S I
Sbjct: 544 GRSWI 548
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 170/337 (50%), Gaps = 50/337 (14%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQS 121
+ G+ L ARK+F EMP+R+AVS+ +++ Y+K+ ++ A+++F M ER++ + +
Sbjct: 152 VDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWN 211
Query: 122 AMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVT 181
A+VDG K+G L NA+++FD M +R+ S+TS+I GY + G A LF++ V
Sbjct: 212 ALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRA 271
Query: 182 WTTMVSGFAQNGLVDHARRFFDLMPEKNT-----------IAWTAM--------VKSYLD 222
W+ ++ G+AQNG + A + F M KN A + M V SYL
Sbjct: 272 WSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLH 331
Query: 223 N--GQFSEGY-------------------KLFLEMPERNVRSWNVMISGCLSANRVDEAI 261
+FS Y KLF EMP+R++ S+ M+ G EAI
Sbjct: 332 QRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAI 391
Query: 262 HLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIM--PFKDMAA---WSAMITA 312
LFE M D + V++T ++ Q+++VE +YF++M + +A+ +S ++
Sbjct: 392 RLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNL 451
Query: 313 YVDEKLLGEALELFNLVP-EKNVGIWNTIIDGYVRNG 348
L EA EL +P E + W +++ G +G
Sbjct: 452 LSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHG 488
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 188/375 (50%), Gaps = 27/375 (7%)
Query: 102 VHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRC 161
VHG + + ++DVV ++ VD Y K L +AR+VF M ERNA SWT+L+ Y +
Sbjct: 132 VHG--LVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKS 189
Query: 162 GRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYL 221
G EEA +FD M ER++ +W +V G ++G + +A++ FD MP+++ I++T+M+ Y
Sbjct: 190 GELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYA 249
Query: 222 DNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRN----HVSWTA 277
G LF E +VR+W+ +I G + +EA +F M +N
Sbjct: 250 KGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVG 309
Query: 278 MVSGLAQNKMVEVARKYFDIMPFKDMAAWSA--MITAYVDEKL----LGEALELFNLVPE 331
++S +Q E+ K D + M +S+ ++ A +D + A +LF +P+
Sbjct: 310 LMSACSQMGCFELCEK-VDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQ 368
Query: 332 KNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAM 391
+++ + ++++G +G EA+RLF M+ P T I+ C G +++
Sbjct: 369 RDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVC-GQSRLVEEGLR 427
Query: 392 VIHLGFEQNTWVT-----NALITLYSKSGDLCSAMLVFELLKS----KDVVSWTAMIVAY 442
L ++ + + + ++ L S++G L A +EL+KS +W +++
Sbjct: 428 YFELMRKKYSILASPDHYSCIVNLLSRTGKLKEA---YELIKSMPFEAHASAWGSLLGGC 484
Query: 443 ANHGHGHHALQVFAR 457
+ HG+ A +V AR
Sbjct: 485 SLHGNTEIA-EVVAR 498
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Query: 360 MLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQN-TWVTNALITLYSKSGDLC 418
M++ P + ++ ++ C + + Q HA +I G EQ+ ++ + + S S L
Sbjct: 1 MIQRLSHPSLLSLETLFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLS 60
Query: 419 SAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSG-TKPDEITFVGLLSAC 477
+ VFE + S W +I Y+N + + RM+ +G +PDE TF ++ C
Sbjct: 61 YSSSVFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVC 120
Query: 478 SHAGLVNQGRRV 489
S+ G V G V
Sbjct: 121 SNNGQVRVGSSV 132
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 166/533 (31%), Positives = 270/533 (50%), Gaps = 45/533 (8%)
Query: 133 LDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQN 192
L AR + E +AF + +L+ GY ++ +F +M M GF
Sbjct: 55 LPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEM----------MRKGF--- 101
Query: 193 GLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNV------ 246
+ P+ + A+ ++K+ + G+++ + + + S
Sbjct: 102 -----------VFPDSFSFAF--VIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLI 148
Query: 247 -MISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAA 305
M GC V+ A +F+ M N V+W A+++ + V AR+ FD M ++ +
Sbjct: 149 GMYGGC---GCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTS 205
Query: 306 WSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCF 365
W+ M+ Y+ L A +F+ +P ++ W+T+I G NG E+ F + R+
Sbjct: 206 WNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGM 265
Query: 366 RPCVTTMTSIITSCD--GMVEIMQA-HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAML 422
P ++T ++++C G E + H V G+ V NALI +YS+ G++ A L
Sbjct: 266 SPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARL 325
Query: 423 VFELLKSKD-VVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAG 481
VFE ++ K +VSWT+MI A HG G A+++F M G PD I+F+ LL ACSHAG
Sbjct: 326 VFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAG 385
Query: 482 LVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVS--TIPPSEIDEAVL 539
L+ +G F +K Y++ ++EHY C+VD+ GR+G + +A D + IPP+ I V
Sbjct: 386 LIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAI---VW 442
Query: 540 VALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEK 599
LLGAC HGNI++A + Q+L L+P +SG VLLSNAYA +W + A +RK M +
Sbjct: 443 RTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQ 502
Query: 600 NVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPE 652
+KK + +S ++V + F GE+ E + L++ + L E GYTPE
Sbjct: 503 RIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPE 555
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/439 (21%), Positives = 181/439 (41%), Gaps = 79/439 (17%)
Query: 71 LKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVV------------ 118
L AR+L P+ DA +N+++ Y ++ + H + +F M + V
Sbjct: 55 LPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIK 114
Query: 119 ----------------------------AQSAMVDGYAKAGRLDNAREVFDNMTERNAFS 150
+ ++ Y G ++ AR+VFD M + N +
Sbjct: 115 AVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVA 174
Query: 151 WTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNT 210
W ++I+ FR A ++FD+M R+ +W M++G+ + G ++ A+R F MP ++
Sbjct: 175 WNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDD 234
Query: 211 IAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIH---LFETM 267
++W+ M+ NG F+E + F E+ + V ++G LSA + +
Sbjct: 235 VSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGF 294
Query: 268 PDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFN 327
++ SW V+ +A+I Y + A +F
Sbjct: 295 VEKAGYSWIVSVN--------------------------NALIDMYSRCGNVPMARLVFE 328
Query: 328 LVPEKNVGI-WNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCD--GMVE 384
+ EK + W ++I G +G+ EA+RLF M P + S++ +C G++E
Sbjct: 329 GMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIE 388
Query: 385 IMQAH----AMVIHLGFEQNTWVTNALITLYSKSGDLCSAM-LVFELLKSKDVVSWTAMI 439
+ + V H+ E + ++ LY +SG L A + ++ + W ++
Sbjct: 389 EGEDYFSEMKRVYHIEPEIEHY--GCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLL 446
Query: 440 VAYANHGHGHHALQVFARM 458
A ++HG+ A QV R+
Sbjct: 447 GACSSHGNIELAEQVKQRL 465
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 142/309 (45%), Gaps = 25/309 (8%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQS 121
I + G G ++ ARK+FDEM Q + V++N++I + DV GA IF M R+ + +
Sbjct: 148 IGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWN 207
Query: 122 AMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV-- 179
M+ GY KAG L++A+ +F M R+ SW+++I G G E+ F ++ +
Sbjct: 208 VMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSP 267
Query: 180 --VTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAW-----TAMVKSYLDNGQFSEGYKL 232
V+ T ++S +Q+G + + + EK +W A++ Y G +
Sbjct: 268 NEVSLTGVLSACSQSGSFEFGKILHGFV-EKAGYSWIVSVNNALIDMYSRCGNVPMARLV 326
Query: 233 FLEMPE-RNVRSWNVMISGCLSANRVDEAIHLFETM------PDRNHVSWTAMVSGLAQN 285
F M E R + SW MI+G + +EA+ LF M PD +S+ +++ +
Sbjct: 327 FEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDG--ISFISLLHACSHA 384
Query: 286 KMVEVARKYFDIMPF-----KDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGI-WNT 339
++E YF M ++ + M+ Y L +A + +P I W T
Sbjct: 385 GLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRT 444
Query: 340 IIDGYVRNG 348
++ +G
Sbjct: 445 LLGACSSHG 453
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 124/293 (42%), Gaps = 50/293 (17%)
Query: 51 HDWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFK 110
H +L N IT R + AR++FD+M R+ S+N M+A Y+K ++ A+ IF
Sbjct: 168 HQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFS 227
Query: 111 AMSERDVVAQSAMVDGYAKAGRLDNA----RE---------------------------- 138
M RD V+ S M+ G A G + + RE
Sbjct: 228 EMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEF 287
Query: 139 --VFDNMTERNAFSW-----TSLISGYFRCGRTEEALQLFDQMSE-RSVVTWTTMVSGFA 190
+ E+ +SW +LI Y RCG A +F+ M E R +V+WT+M++G A
Sbjct: 288 GKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLA 347
Query: 191 QNGLVDHARRFFDLMPE----KNTIAWTAMVKSYLDNGQFSEGYKLFLEMP-----ERNV 241
+G + A R F+ M + I++ +++ + G EG F EM E +
Sbjct: 348 MHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEI 407
Query: 242 RSWNVMISGCLSANRVDEAIHLFETMP-DRNHVSWTAMVSGLAQNKMVEVARK 293
+ M+ + ++ +A MP + W ++ + + +E+A +
Sbjct: 408 EHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQ 460
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 171/635 (26%), Positives = 317/635 (49%), Gaps = 74/635 (11%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKD---------VHGA------- 105
I++ R G L++ARK+FD+MP R+ VSYN++ + Y +N D H A
Sbjct: 139 ISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPN 198
Query: 106 ------------------------ETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFD 141
I K +VV Q++++ Y+ G L++AR +FD
Sbjct: 199 SSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFD 258
Query: 142 NMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGLVD- 196
+ R+A +W ++I G + + E+ L F M V T++ +++G ++ G
Sbjct: 259 CVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSL 318
Query: 197 ----HAR-----RFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVM 247
HAR DL P N A++ Y G E + +F + N+ SWN +
Sbjct: 319 GKLIHARIIVSDSLADL-PLDN-----ALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSI 372
Query: 248 ISGCLSANRVDEAIHLFETM-----PDRNHVSWTAMVSGLAQ-NKMVEVARKYFDIMPF- 300
ISGC ++A+ ++ + P + +++A +S A+ + V + +
Sbjct: 373 ISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLG 432
Query: 301 --KDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFI 358
+ + + +++ Y + A ++F+++ E++V +W +I G+ R G + A++ FI
Sbjct: 433 YERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFI 492
Query: 359 LMLRSCFRPCVTTMTSIITSCDGMVEIMQA---HAMVIHLGFEQNTWVTNALITLYSKSG 415
M R R +++S+I +C M + Q H + I GF+ V AL+ +Y K+G
Sbjct: 493 EMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNG 552
Query: 416 DLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLS 475
+A +F L + D+ W +M+ AY+ HG AL F +++ +G PD +T++ LL+
Sbjct: 553 KYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLA 612
Query: 476 ACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEID 535
ACSH G QG+ +++ +K + +HYSC+V+++ +AGLV+EA++++ PP
Sbjct: 613 ACSHRGSTLQGKFLWNQMK-EQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQ 671
Query: 536 EAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKR 595
+ LL AC N+++ +++L L+P + ++LLSN YA +W++ A++R++
Sbjct: 672 AELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRK 731
Query: 596 MKEKNVKKISGFSQIQVKGKN-HLFFVGERSHPQV 629
++ K G S I+V N +F G++S+P+V
Sbjct: 732 IRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPEV 766
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 142/577 (24%), Positives = 260/577 (45%), Gaps = 84/577 (14%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVY--------LKNKDVH-GAETIFKAM 112
I++ R L++ARK+FD+MPQR+ V+ + AV+ L ++ + G+ + M
Sbjct: 29 ISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMIFFM 88
Query: 113 SERDVVAQSAMVDGYAKAGR---LDNAREVFD-------NMTERNAFSWTSLISGYFRCG 162
++ S++V+ K L AR++ + ++ +LIS Y RCG
Sbjct: 89 PLNEIA--SSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCG 146
Query: 163 RTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMP-------EKNTIAWTA 215
E+A ++FD+M R+VV++ + S +++N D A F L + N+ +T+
Sbjct: 147 SLEQARKVFDKMPHRNVVSYNALYSAYSRNP--DFASYAFPLTTHMAFEYVKPNSSTFTS 204
Query: 216 MVK---------------------SYLDN--------------GQFSEGYKLFLEMPERN 240
+V+ Y DN G ++F + R+
Sbjct: 205 LVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRD 264
Query: 241 VRSWNVMISGCLSANRVDEAIHLFETM----PDRNHVSWTAMVSGLAQ------NKMVEV 290
+WN MI G L +++++ + F M D +++ +++G ++ K++
Sbjct: 265 AVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHA 324
Query: 291 ARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEA 350
D D+ +A++ Y + EA +F + N+ WN+II G NG
Sbjct: 325 RIIVSD--SLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFG 382
Query: 351 GEALRLFILMLR-SCFRPCVTTMTSIITSC---DGMVEIMQAHAMVIHLGFEQNTWVTNA 406
+A+ ++ +LR S RP T ++ I++ + V H V LG+E++ +V
Sbjct: 383 EQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTT 442
Query: 407 LITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPD 466
L+++Y K+ + SA VF+++K +DVV WT MIV ++ G+ A+Q F M + D
Sbjct: 443 LLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSD 502
Query: 467 EITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVV 526
+ ++ ACS ++ QG VF + + + LVDM G+ G A +
Sbjct: 503 GFSLSSVIGACSDMAMLRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIF 561
Query: 527 STIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLL 563
S S D ++LGA HG ++ A S +++L
Sbjct: 562 SL--ASNPDLKCWNSMLGAYSQHGMVEKALSFFEQIL 596
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 162/360 (45%), Gaps = 41/360 (11%)
Query: 185 MVSGFAQNGLVDHARRFFDLMPEKN--TIAWTAMVKSYLDNGQFSEG-------YKLFLE 235
++S + + ++ AR+ FD MP++N T+ + V Y+ G +++
Sbjct: 28 LISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMIFF 87
Query: 236 MPERNVRSWNVMIS-GCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKY 294
MP + S V ++ C+S + A + H +G A
Sbjct: 88 MPLNEIASSVVELTRKCVSITVLKRARQI--------HALVLTAGAGAATES-------- 131
Query: 295 FDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGE-AGEA 353
P+ + + +I+ YV L +A ++F+ +P +NV +N + Y RN + A A
Sbjct: 132 ----PYAN----NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYA 183
Query: 354 LRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAM---VIHLGFEQNTWVTNALITL 410
L M +P +T TS++ C + +++ ++ +I LG+ N V +++ +
Sbjct: 184 FPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGM 243
Query: 411 YSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITF 470
YS GDL SA +F+ + ++D V+W MIV + L F M+ SG P + T+
Sbjct: 244 YSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTY 303
Query: 471 VGLLSACSHAGLVNQGRRVFDSIKGAYNL-NLKVEHYSCLVDMLGRAGLVNEAMDVVSTI 529
+L+ CS G + G+ + I + +L +L +++ L+DM G + EA V I
Sbjct: 304 SIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDN--ALLDMYCSCGDMREAFYVFGRI 361
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 261 bits (666), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 177/641 (27%), Positives = 309/641 (48%), Gaps = 65/641 (10%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMS-ERDV 117
N + + + G L+EAR +FDEM +R+ S+N++IA Y+K +V A +F++ + ERD+
Sbjct: 27 NQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDL 86
Query: 118 VAQSAMVDGYAKA-GRLDNAREVFDNMTER------------------------------ 146
+ + ++ G+AK G A E+F M +
Sbjct: 87 ITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQ 146
Query: 147 ------------NAFSWTSLISGYFRCGRTEEALQLFDQMSERSV--VTWTTMVSGFAQN 192
F+ +SLI Y +CG+ +E +F+ V V M++ + +
Sbjct: 147 LHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCRE 206
Query: 193 GLVDHARRFFDLMPEKN-TIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSW------- 244
G +D A F PE N TI+W ++ Y NG E K+ + M E ++ W
Sbjct: 207 GDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLK-WDEHSFGA 265
Query: 245 --NVMISGCLSANRVDEAIH--LFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPF 300
NV+ S L + ++ + +H + + N + +V + ++ A + F
Sbjct: 266 VLNVLSS--LKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGF 323
Query: 301 KDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLF-IL 359
++ + S+MI Y + + EA LF+ + EKN+ +W + GY+ + L L
Sbjct: 324 GNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAF 383
Query: 360 MLRSCFRPCVTTMTSIITSCD---GMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGD 416
+ P M S++ +C M + H + G + + A + +YSK G+
Sbjct: 384 IANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGN 443
Query: 417 LCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSA 476
+ A +F+ +D V + AMI A+HGH + Q F M G KPDEITF+ LLSA
Sbjct: 444 VEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSA 503
Query: 477 CSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDE 536
C H GLV +G + F S+ AYN++ + HY+C++D+ G+A +++A++++ I E D
Sbjct: 504 CRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDA 563
Query: 537 AVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRM 596
+L A L AC + N ++ + +KLL +E ++ Y+ ++NAYA+ +WDE ++R +M
Sbjct: 564 VILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQM 623
Query: 597 KEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQ 637
+ K ++ SG S + + H+F + SH + E IY L
Sbjct: 624 RGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAMLH 664
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 126/506 (24%), Positives = 216/506 (42%), Gaps = 86/506 (16%)
Query: 97 LKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLIS 156
LK+ +H +I K+ S V+ + +V+ Y+K+G L AR VFD M ERN +SW ++I+
Sbjct: 4 LKDGFLHHIRSI-KSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIA 62
Query: 157 GYFRCGRTEEALQLFDQMS-ERSVVTWTTMVSGFAQ-NGLVDHARRFFDLM--PEKNTI- 211
Y + +EA +LF+ + ER ++T+ T++SGFA+ +G A F M EK+ I
Sbjct: 63 AYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIW 122
Query: 212 ---------------------------------------AWTAMVKSYLDNGQFSEGYKL 232
A ++++ Y G+F E +
Sbjct: 123 IDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNI 182
Query: 233 F----LEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNH-VSWTAMVSGLAQNKM 287
F +E + R N MI+ +D+A+ +F P+ N +SW +++G AQN
Sbjct: 183 FNGSCVEFVDSVAR--NAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGY 240
Query: 288 VEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRN 347
E A K M ++ W DE G L + L K++ I + ++N
Sbjct: 241 EEEALKMAVSME-ENGLKW--------DEHSFGAVLNV--LSSLKSLKIGKEVHARVLKN 289
Query: 348 GEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNAL 407
G + + + + C M AH + GF N + +++
Sbjct: 290 GSYSN-------------KFVSSGIVDVYCKCGNMKYAESAHLL---YGF-GNLYSASSM 332
Query: 408 ITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTK-PD 466
I YS G + A +F+ L K++V WTAM + Y N L++ + + T PD
Sbjct: 333 IVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPD 392
Query: 467 EITFVGLLSACSHAGLVNQGRRVF-DSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDV 525
+ V +L ACS + G+ + S++ ++ K+ + VDM + G V A +
Sbjct: 393 SLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKL--VTAFVDMYSKCGNVEYAERI 450
Query: 526 VSTIPPSEIDEAVLVALLGACKLHGN 551
+ E D + A++ C HG+
Sbjct: 451 FDS--SFERDTVMYNAMIAGCAHHGH 474
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 261 bits (666), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 173/551 (31%), Positives = 281/551 (50%), Gaps = 35/551 (6%)
Query: 131 GRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMS----ERSVVTWTTMV 186
GR N F ++ + +SLIS C + Q+ + ++S T ++
Sbjct: 29 GRTSNNSGTFSEISNQKELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLI 88
Query: 187 SGFAQNGLV--DHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSW 244
+ G+ +ARR + + +N WTA+++ Y G+F E ++ M + +
Sbjct: 89 RTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPV 148
Query: 245 NVMISGCLSANRVDEAIHL-----FETMPDRNHV---SWTAMVSGLAQNKMVEVARKYFD 296
+ S L A + ++L +T R M+ + + ++ ARK FD
Sbjct: 149 SFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFD 208
Query: 297 IMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRL 356
MP +D+ +W+ +I AY + A ELF +P K++ W ++ G+ +N + EAL
Sbjct: 209 EMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEY 268
Query: 357 FILMLRSCFRPCVTTMTSIITSC---------DGMVEIMQAHAMVIHLGFEQNTWVT--N 405
F M +S R T+ I++C D V+I Q G+ + V +
Sbjct: 269 FDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKS------GYSPSDHVVIGS 322
Query: 406 ALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVT-SGTK 464
ALI +YSK G++ A+ VF + +K+V ++++MI+ A HG AL +F MVT + K
Sbjct: 323 ALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIK 382
Query: 465 PDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMD 524
P+ +TFVG L ACSH+GLV+QGR+VFDS+ + + +HY+C+VD+LGR G + EA++
Sbjct: 383 PNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALE 442
Query: 525 VVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEE 584
++ T+ E V ALLGAC++H N ++A + L LEP G Y+LLSN YA+
Sbjct: 443 LIKTM-SVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAG 501
Query: 585 QWDEFAQVRKRMKEKNVKKISGFSQIQVK-GKNHLFFVGERSHPQVEEIYGFLQQSLQPL 643
W +VRK +KEK +KK S + K G+ H FF G +HP +I L++ ++ L
Sbjct: 502 DWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERL 561
Query: 644 MRETGYTPENS 654
GY P+ S
Sbjct: 562 T-VLGYQPDLS 571
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 140/275 (50%), Gaps = 25/275 (9%)
Query: 90 NSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAF 149
N+MI +Y+K + + A +F M ERDV++ + ++ YA+ G ++ A E+F+++ ++
Sbjct: 188 NTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMV 247
Query: 150 SWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHARRFFDLM 205
+WT++++G+ + + +EAL+ FD+M + + VT +S AQ G +A R +
Sbjct: 248 AWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIA 307
Query: 206 ------PEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDE 259
P + + +A++ Y G E +F+ M +NV +++ MI G + R E
Sbjct: 308 QKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQE 367
Query: 260 AIHLFETMPDR-----NHVSWTAMVSGLAQNKMVEVARKYFDIM-------PFKDMAAWS 307
A+HLF M + N V++ + + + +V+ R+ FD M P +D ++
Sbjct: 368 ALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRD--HYT 425
Query: 308 AMITAYVDEKLLGEALELFNLVP-EKNVGIWNTII 341
M+ L EALEL + E + G+W ++
Sbjct: 426 CMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALL 460
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 149/310 (48%), Gaps = 30/310 (9%)
Query: 74 ARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRL 133
ARK+FDEMP+RD +S+ +IA Y + ++ A +F+++ +D+VA +AMV G+A+ +
Sbjct: 203 ARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKP 262
Query: 134 DNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFD---QMSERS-------VVTWT 183
A E FD M + + ++GY A + D Q++++S VV +
Sbjct: 263 QEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGS 322
Query: 184 TMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEM-PERNVR 242
++ +++ G V+ A F M KN +++M+ +G+ E LF M + ++
Sbjct: 323 ALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIK 382
Query: 243 SWNVMISG----CLSANRVDEAIHLFETM-------PDRNHVSWTAMVSGLAQNKMVEVA 291
V G C + VD+ +F++M P R+H +T MV L + ++ A
Sbjct: 383 PNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDH--YTCMVDLLGRTGRLQEA 440
Query: 292 RKYFDIMPFKDMAA-WSAMITA---YVDEKLLGEALE-LFNLVPEKNVGIWNTIIDGYVR 346
+ M + W A++ A + + ++ A E LF L P+ +G + + + Y
Sbjct: 441 LELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDI-IGNYILLSNVYAS 499
Query: 347 NGEAGEALRL 356
G+ G LR+
Sbjct: 500 AGDWGGVLRV 509
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 186/652 (28%), Positives = 312/652 (47%), Gaps = 66/652 (10%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQR-DAVSYNSMIAVYLKNKDVHGAETIFKAM----- 112
N +++ + L AR+LFD ++ DAV +NS+++ Y + +F+ M
Sbjct: 221 NALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGP 280
Query: 113 --SERDVVAQSAMVDG--YAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEAL 168
+ +V+ DG YAK G+ +A + + + +LI+ Y RCG+ +A
Sbjct: 281 APNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAE 340
Query: 169 QLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFF-DLMPEKNTIAWTAMVKSYLDNGQFS 227
++ QM+ VVTW +++ G+ QN + A FF D++ + +M +G+ S
Sbjct: 341 RILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLS 400
Query: 228 E---GYKLFLEMP----ERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVS 280
G +L + + N++ N +I N F M D++ +SWT +++
Sbjct: 401 NLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIA 460
Query: 281 GLAQNK--------MVEVARKYFDI------------------------------MPFKD 302
G AQN +VA+K +I D
Sbjct: 461 GYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLD 520
Query: 303 MAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLR 362
+ ++ Y + +G A +F + K+V W ++I NG EA+ LF M+
Sbjct: 521 TVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVE 580
Query: 363 SCFRP------CVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGD 416
+ C+ + + +++ + EI H ++ GF + A++ +Y+ GD
Sbjct: 581 TGLSADSVALLCILSAAASLSALNKGREI---HCYLLRKGFCLEGSIAVAVVDMYACCGD 637
Query: 417 LCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSA 476
L SA VF+ ++ K ++ +T+MI AY HG G A+++F +M PD I+F+ LL A
Sbjct: 638 LQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYA 697
Query: 477 CSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDE 536
CSHAGL+++GR ++ Y L EHY CLVDMLGRA V EA + V + +E
Sbjct: 698 CSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMM-KTEPTA 756
Query: 537 AVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRM 596
V ALL AC+ H ++ Q+LL LEP + G VL+SN +A + +W++ +VR +M
Sbjct: 757 EVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKM 816
Query: 597 KEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETG 648
K ++K G S I++ GK H F ++SHP+ +EIY L + + L RE G
Sbjct: 817 KASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREKG 868
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 130/488 (26%), Positives = 220/488 (45%), Gaps = 61/488 (12%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIF------------ 109
+ + G+ G L +A K+FDEMP R A ++N+MI Y+ N + A ++
Sbjct: 123 VFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGL 182
Query: 110 -------KAMSE-RDVVAQS-------------------AMVDGYAKAGRLDNAREVFDN 142
KA ++ RD+ + S A+V YAK L AR +FD
Sbjct: 183 SSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDG 242
Query: 143 MTER-NAFSWTSLISGYFRCGRTEEALQLFDQM-------SERSVVTWTTMVSGF--AQN 192
E+ +A W S++S Y G++ E L+LF +M + ++V+ T GF A+
Sbjct: 243 FQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKL 302
Query: 193 GLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCL 252
G HA A++ Y G+ + ++ +M +V +WN +I G +
Sbjct: 303 GKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYV 362
Query: 253 SANRVDEAIHLFETMPDRNH----VSWTAMV--SGLAQNKMVEVARKYFDIMPFKD--MA 304
EA+ F M H VS T+++ SG N + + + I D +
Sbjct: 363 QNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQ 422
Query: 305 AWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSC 364
+ +I Y L F + +K++ W T+I GY +N EAL LF + +
Sbjct: 423 VGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKR 482
Query: 365 FRPCVTTMTSIITSCD---GMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAM 421
+ SI+ + M+ + + H ++ G +T + N L+ +Y K ++ A
Sbjct: 483 MEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYAT 541
Query: 422 LVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAG 481
VFE +K KDVVSWT+MI + A +G+ A+++F RMV +G D + + +LSA +
Sbjct: 542 RVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLS 601
Query: 482 LVNQGRRV 489
+N+GR +
Sbjct: 602 ALNKGREI 609
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 146/328 (44%), Gaps = 36/328 (10%)
Query: 216 MVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSW 275
+V Y G + K+F EMP+R +WN MI +S A+ L+ W
Sbjct: 122 LVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALY----------W 171
Query: 276 TAMVSGLAQN-----KMVEVARKYFDIMPFKDMAAW-------------SAMITAYVDEK 317
V G+ +++ K DI ++ + +A+++ Y
Sbjct: 172 NMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKND 231
Query: 318 LLGEALELFNLVPEK-NVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSII 376
L A LF+ EK + +WN+I+ Y +G++ E L LF M + P T+ S +
Sbjct: 232 DLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSAL 291
Query: 377 TSCDGMVEIM---QAHAMVIHLGFEQNT-WVTNALITLYSKSGDLCSAMLVFELLKSKDV 432
T+CDG + HA V+ + +V NALI +Y++ G + A + + + DV
Sbjct: 292 TACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADV 351
Query: 433 VSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDS 492
V+W ++I Y + AL+ F+ M+ +G K DE++ +++A + G +
Sbjct: 352 VTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAY 411
Query: 493 -IKGAYNLNLKVEHYSCLVDMLGRAGLV 519
IK ++ NL+V + L+DM + L
Sbjct: 412 VIKHGWDSNLQVGN--TLIDMYSKCNLT 437
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 172/594 (28%), Positives = 309/594 (52%), Gaps = 34/594 (5%)
Query: 88 SYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQ---SAMVDGYAKAGRLDNAREVFDNMT 144
+++ ++ + + + G +TI M + A+ S +VD K G +D AR+VFD M+
Sbjct: 67 NFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEISGSKLVDASLKCGDIDYARQVFDGMS 126
Query: 145 ERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVV----TWTTMVSGFAQNGLVDHARR 200
ER+ +W SLI+ + R++EA++++ M +V+ T +++ F+ L A+R
Sbjct: 127 ERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQR 186
Query: 201 FFDL-----MPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSAN 255
L + N +A+V Y+ G+ E + + E++V +I G
Sbjct: 187 SHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKG 246
Query: 256 RVDEAIHLFETM----PDRNHVSWTAMVSGLAQNKMVEVARKYFDIM---PFKD-MAAWS 307
EA+ F++M N ++ +++ K + + +M F+ +A+ +
Sbjct: 247 EDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQT 306
Query: 308 AMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRP 367
+++T Y+ L+ ++L +F + N W ++I G V+NG AL F M+R +P
Sbjct: 307 SLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKP 366
Query: 368 CVTTMTSIITSCDGMV---EIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAM--L 422
T++S + C + E Q H +V GF+++ + + LI LY K G CS M L
Sbjct: 367 NSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCG--CSDMARL 424
Query: 423 VFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGL 482
VF+ L DV+S MI +YA +G G AL +F RM+ G +P+++T + +L AC+++ L
Sbjct: 425 VFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRL 484
Query: 483 VNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEA-MDVVSTIPPSEIDEAVLVA 541
V +G +FDS + + L +HY+C+VD+LGRAG + EA M I P D +
Sbjct: 485 VEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINP---DLVLWRT 540
Query: 542 LLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNV 601
LL ACK+H +++A I +K+L +EP G +L+SN YA+ +W+ +++ +MK+ +
Sbjct: 541 LLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKL 600
Query: 602 KKISGFSQIQVKGKNHLFFVGER-SHPQVEEIYGFLQQSLQPLMRETGYTPENS 654
KK S +++ + H F G+ SHP E+I L++ ++ ++ GY + S
Sbjct: 601 KKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKK-SKDLGYVEDKS 653
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 186/438 (42%), Gaps = 63/438 (14%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYA 128
G + AR++FD M +R V++NS+IA +K++ A +++ M +V+ +
Sbjct: 113 GDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVF 172
Query: 129 KA---------GRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV 179
KA + + V + N F ++L+ Y + G+T EA + D++ E+ V
Sbjct: 173 KAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDV 232
Query: 180 VTWTTMVSGFAQNGLVDHARRFFDLM------PEKNTIAWTAMVKSYLD---NGQFSEGY 230
V T ++ G++Q G A + F M P + T A + L NG+ G
Sbjct: 233 VLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGL 292
Query: 231 KLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEV 290
+ E + S +++ L + VD+++ +F+ + N VSWT+++SGL QN E+
Sbjct: 293 -MVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEM 351
Query: 291 ARKYF------DIMPF---------------------------------KDMAAWSAMIT 311
A F I P +D A S +I
Sbjct: 352 ALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLID 411
Query: 312 AYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTT 371
Y A +F+ + E +V NT+I Y +NG EAL LF M+ +P T
Sbjct: 412 LYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVT 471
Query: 372 MTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTN----ALITLYSKSGDLCSAMLVFELL 427
+ S++ +C+ +++ + + +TN ++ L ++G L A ++ +
Sbjct: 472 VLSVLLACNN-SRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEV 530
Query: 428 KSKDVVSWTAMIVAYANH 445
+ D+V W ++ A H
Sbjct: 531 INPDLVLWRTLLSACKVH 548
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/445 (33%), Positives = 252/445 (56%), Gaps = 18/445 (4%)
Query: 179 VVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPE 238
V+ ++++S + + G V AR+ FD MPE+N W AM+ Y+ NG LF E+
Sbjct: 81 VMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISV 140
Query: 239 -RNVRSWNVMISGCLSANRVDEAIHLFETMPD--RNHVSWTAMVSGLAQNKMVEVARKYF 295
RN +W MI G +++A LFE MP +N +W+ M+ N+ +E ARK+F
Sbjct: 141 CRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFF 200
Query: 296 DIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALR 355
+ +P K+ WS M++ Y + EA +F V +++ IWNT+I GY +NG + +A+
Sbjct: 201 EDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAID 260
Query: 356 LFILMLRSCFRPCVTTMTSIITSC--DGMVEI-MQAHAMVIHLGFEQNTWVTNALITLYS 412
F M + P T++SI+++C G +++ + H+++ H G E N +V+NALI +Y+
Sbjct: 261 AFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYA 320
Query: 413 KSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVG 472
K GDL +A VFE + + V +MI A HG G AL++F+ M + KPDEITF+
Sbjct: 321 KCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIA 380
Query: 473 LLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVST--IP 530
+L+AC H G + +G ++F +K ++ V+H+ CL+ +LGR+G + EA +V +
Sbjct: 381 VLTACVHGGFLMEGLKIFSEMK-TQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVK 439
Query: 531 PSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGY-----VLLSNAYAAEEQ 585
P ++ VL ALLGACK+H + ++A + K++ + + Y +SN YA E+
Sbjct: 440 P---NDTVLGALLGACKVHMDTEMAEQV-MKIIETAGSITNSYSENHLASISNLYAHTER 495
Query: 586 WDEFAQVRKRMKEKNVKKISGFSQI 610
W +R M+++ ++K G S +
Sbjct: 496 WQTAEALRVEMEKRGLEKSPGLSSL 520
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 190/395 (48%), Gaps = 17/395 (4%)
Query: 85 DAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMT 144
D + +S+I++Y K V A +F M ER+V +AM+ GY G A +F+ ++
Sbjct: 80 DVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEIS 139
Query: 145 E-RNAFSWTSLISGYFRCGRTEEALQLFDQM--SERSVVTWTTMVSGFAQNGLVDHARRF 201
RN +W +I GY + E+A +LF++M ++V W+ M+ + N ++ AR+F
Sbjct: 140 VCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKF 199
Query: 202 FDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAI 261
F+ +PEKN W+ M+ Y G E +F + R++ WN +I+G D+AI
Sbjct: 200 FEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAI 259
Query: 262 HLFETMPDRNH----VSWTAMVSGLAQNKMVEVARKYFDIMPFKDMA----AWSAMITAY 313
F M + V+ ++++S AQ+ ++V R+ ++ + + +A+I Y
Sbjct: 260 DAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMY 319
Query: 314 VDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMT 373
L A +F + ++V N++I +G+ EAL +F M +P T
Sbjct: 320 AKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFI 379
Query: 374 SIITSC---DGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAM-LVFEL-LK 428
+++T+C ++E ++ + + + N LI L +SG L A LV E+ +K
Sbjct: 380 AVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVK 439
Query: 429 SKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGT 463
D V A++ A H A QV + T+G+
Sbjct: 440 PNDTV-LGALLGACKVHMDTEMAEQVMKIIETAGS 473
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 176/368 (47%), Gaps = 53/368 (14%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSE-RDVVAQ 120
I++ G+ G + ARK+FDEMP+R+ ++N+MI Y+ N D A +F+ +S R+ V
Sbjct: 88 ISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTW 147
Query: 121 SAMVDGYAKAGRLDNAREVFDNM---------------------------------TERN 147
M+ GY K ++ ARE+F+ M E+N
Sbjct: 148 IEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKN 207
Query: 148 AFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHA-RRFFDLMP 206
AF W+ ++SGYFR G EA +F ++ R +V W T+++G+AQNG D A FF++
Sbjct: 208 AFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQG 267
Query: 207 ---EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVR----SWNVMISGCLSANRVDE 259
E + + ++++ + +G+ G ++ + R + N +I ++
Sbjct: 268 EGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLEN 327
Query: 260 AIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMA----AWSAMITAYVD 315
A +FE++ R+ +M+S LA + + A + F M D+ + A++TA V
Sbjct: 328 ATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVH 387
Query: 316 EKLLGEALELFNLVPEK----NVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTT 371
L E L++F+ + + NV + +I R+G+ EA RL M +P T
Sbjct: 388 GGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMH---VKPNDTV 444
Query: 372 MTSIITSC 379
+ +++ +C
Sbjct: 445 LGALLGAC 452
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 151/477 (31%), Positives = 257/477 (53%), Gaps = 17/477 (3%)
Query: 184 TMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMP-ERNVR 242
+++ +A G ++ + FD MP+++ ++W ++ SY+ NG+F + +F M E N++
Sbjct: 86 SLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLK 145
Query: 243 SWNVMISGCLSAN------RVDEAIHLFETMPDRNHVS-WTAMVSGLAQNKMVEVARKYF 295
I LSA + E I+ F V A+V + ++ AR F
Sbjct: 146 FDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVF 205
Query: 296 DIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALR 355
D M K++ W++M+ YV + EA LF P K+V +W +++GYV+ EAL
Sbjct: 206 DSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALE 265
Query: 356 LFILMLRSCFRPCVTTMTSIITSCDGMVEIMQA---HAMVIHLGFEQNTWVTNALITLYS 412
LF M + RP + S++T C + Q H + + V AL+ +Y+
Sbjct: 266 LFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYA 325
Query: 413 KSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVG 472
K G + +A+ VF +K +D SWT++I A +G AL ++ M G + D ITFV
Sbjct: 326 KCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVA 385
Query: 473 LLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPS 532
+L+AC+H G V +GR++F S+ +N+ K EH SCL+D+L RAGL++EA +++ +
Sbjct: 386 VLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKM-RG 444
Query: 533 EIDEA---VLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEF 589
E DE V +LL A + +GN+K+A + +KL +E + S + LL++ YA+ +W++
Sbjct: 445 ESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDV 504
Query: 590 AQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGER--SHPQVEEIYGFLQQSLQPLM 644
VR++MK+ ++K G S I++ G H F VG+ SHP+++EI L Q+ ++
Sbjct: 505 TNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSMLHQTTNLML 561
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 184/419 (43%), Gaps = 61/419 (14%)
Query: 97 LKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLIS 156
++ + VHG KA E D ++++ YA G+++ +VFD M +R+ SW LIS
Sbjct: 63 IEGEKVHGYAV--KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLIS 120
Query: 157 GYFRCGRTEEALQLFDQMS---------------------------------------ER 177
Y GR E+A+ +F +MS E
Sbjct: 121 SYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEM 180
Query: 178 SVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMP 237
SV +V F + G +D AR FD M +KN WT+MV Y+ G+ E LF P
Sbjct: 181 SVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSP 240
Query: 238 ERNVRSWNVMISGCLSANRVDEAIHLFETM------PDRNHVSWTAMVSGLAQNKMVEVA 291
++V W M++G + NR DEA+ LF M PD + ++++G AQ +E
Sbjct: 241 VKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPD--NFVLVSLLTGCAQTGALEQG 298
Query: 292 R---KYFDIMPFK-DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRN 347
+ Y + D +A++ Y + ALE+F + E++ W ++I G N
Sbjct: 299 KWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMN 358
Query: 348 GEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQA----HAMVIHLGFEQNTWV 403
G +G AL L+ M R T +++T+C+ + + H+M + +
Sbjct: 359 GMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEH 418
Query: 404 TNALITLYSKSGDLCSAMLVFELLKSKD----VVSWTAMIVAYANHGHGHHALQVFARM 458
+ LI L ++G L A + + ++ + V + +++ A N+G+ A +V ++
Sbjct: 419 CSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKL 477
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 143/316 (45%), Gaps = 51/316 (16%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSE-------------- 114
GK++ K+FDEMPQRD VS+N +I+ Y+ N A +FK MS+
Sbjct: 95 GKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVST 154
Query: 115 -----------------RDVVAQ--------SAMVDGYAKAGRLDNAREVFDNMTERNAF 149
R VV + +A+VD + K G LD AR VFD+M ++N
Sbjct: 155 LSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVK 214
Query: 150 SWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMP--- 206
WTS++ GY GR +EA LF++ + VV WT M++G+ Q D A F M
Sbjct: 215 CWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAG 274
Query: 207 -EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLS----ANRVDEAI 261
+ +++ G +G + + E V V+ + + ++ A+
Sbjct: 275 IRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETAL 334
Query: 262 HLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYF----DIMPFKDMAAWSAMITAYVDEK 317
+F + +R+ SWT+++ GLA N M A + ++ D + A++TA
Sbjct: 335 EVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGG 394
Query: 318 LLGEALELFNLVPEKN 333
+ E ++F+ + E++
Sbjct: 395 FVAEGRKIFHSMTERH 410
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 140/311 (45%), Gaps = 26/311 (8%)
Query: 5 EGYLAFVLKTLVMKMGVCYHHRRRVFSQCQPIFRFLRNFTASISISHDWSLRKRNVEITI 64
E L F T+V + C + + I+RF + + S+R N + +
Sbjct: 141 ESNLKFDEGTIVSTLSACSALKNLEIGE--RIYRF-------VVTEFEMSVRIGNALVDM 191
Query: 65 LGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMV 124
+ G L +AR +FD M ++ + SM+ Y+ + A +F+ +DVV +AM+
Sbjct: 192 FCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMM 251
Query: 125 DGYAKAGRLDNAREVFDNM----TERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV- 179
+GY + R D A E+F M + F SL++G + G E+ + ++E V
Sbjct: 252 NGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVT 311
Query: 180 ---VTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEM 236
V T +V +A+ G ++ A F + E++T +WT+++ NG L+ EM
Sbjct: 312 VDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEM 371
Query: 237 PERNVR----SWNVMISGCLSANRVDEAIHLFETMPDRNHVS-----WTAMVSGLAQNKM 287
VR ++ +++ C V E +F +M +R++V + ++ L + +
Sbjct: 372 ENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGL 431
Query: 288 VEVARKYFDIM 298
++ A + D M
Sbjct: 432 LDEAEELIDKM 442
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 81/149 (54%), Gaps = 3/149 (2%)
Query: 382 MVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVA 441
++E + H + G E +++V+N+L+ +Y+ G + VF+ + +DVVSW +I +
Sbjct: 62 VIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISS 121
Query: 442 YANHGHGHHALQVFARMVT-SGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLN 500
Y +G A+ VF RM S K DE T V LSACS + G R++ + + ++
Sbjct: 122 YVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMS 181
Query: 501 LKVEHYSCLVDMLGRAGLVNEAMDVVSTI 529
+++ + LVDM + G +++A V ++
Sbjct: 182 VRIGN--ALVDMFCKCGCLDKARAVFDSM 208
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 184/629 (29%), Positives = 311/629 (49%), Gaps = 69/629 (10%)
Query: 71 LKEARKLFDEMPQRDAVSYNSMI------AVYLKN-----------------------KD 101
+++A +LFDEM + DA +N MI +Y++ K
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 102 VHGAET----------IFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSW 151
V G + + K DV ++++ Y K G +A +VF+ M ER+ SW
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 152 TSLISGYFRCGRTEEALQLF----------DQMSERSVVTWTTMVSGFAQNGLVDHARRF 201
S+ISGY G +L LF D+ S S + + V + G H
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYS-PKMGKEIHCHAV 258
Query: 202 FDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSAN-RVDEA 260
+ + + T+++ Y G+ S ++F M +RN+ +WNVMI GC + N RV +A
Sbjct: 259 RSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMI-GCYARNGRVTDA 317
Query: 261 IHLFETMPDRNHVSWTAMVS-------GLAQNKMVEVARKYFDIMPFKDMAAWSAMITAY 313
F+ M ++N + + S + + + + +P M +A+I Y
Sbjct: 318 FLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLP--HMVLETALIDMY 375
Query: 314 VDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMT 373
+ L A +F+ + EKNV WN+II YV+NG+ AL LF + S P TT+
Sbjct: 376 GECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIA 435
Query: 374 SIITSCD---GMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSK 430
SI+ + + E + HA ++ + NT + N+L+ +Y+ GDL A F + K
Sbjct: 436 SILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLK 495
Query: 431 DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVF 490
DVVSW ++I+AYA HG G ++ +F+ M+ S P++ TF LL+ACS +G+V++G F
Sbjct: 496 DVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYF 555
Query: 491 DSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIP--PSEIDEAVLVALLGACKL 548
+S+K Y ++ +EHY C++D++GR G + A + +P P+ + +LL A +
Sbjct: 556 ESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPT---ARIWGSLLNASRN 612
Query: 549 HGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFS 608
H +I +A +++ +E ++G YVLL N YA +W++ +++ M+ K + + S S
Sbjct: 613 HKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRS 672
Query: 609 QIQVKGKNHLFFVGERSHPQVEEIYGFLQ 637
++ KGK+H+F G+RSH +IY L
Sbjct: 673 TVEAKGKSHVFTNGDRSHVATNKIYEVLD 701
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 194/402 (48%), Gaps = 25/402 (6%)
Query: 109 FKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEAL 168
+K + + A + + G+A + +++A ++FD M + +AF W +I G+ CG EA+
Sbjct: 56 YKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAV 115
Query: 169 QLFDQM----SERSVVTWTTMVSGFAQNGLVDHARRFFDLMPE----KNTIAWTAMVKSY 220
Q + +M + T+ ++ A ++ ++ ++ + + +++ Y
Sbjct: 116 QFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLY 175
Query: 221 LDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM------PDR-NHV 273
+ G + K+F EMPER++ SWN MISG L+ ++ LF+ M PDR + +
Sbjct: 176 MKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTM 235
Query: 274 SWTAMVSGLAQNKM-----VEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNL 328
S S + KM R + D+ ++++ Y + A +FN
Sbjct: 236 SALGACSHVYSPKMGKEIHCHAVRSRIET---GDVMVMTSILDMYSKYGEVSYAERIFNG 292
Query: 329 VPEKNVGIWNTIIDGYVRNGEAGEALRLFILML-RSCFRPCVTTMTSIITSCDGMVEIMQ 387
+ ++N+ WN +I Y RNG +A F M ++ +P V T +++ + ++E
Sbjct: 293 MIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA-SAILEGRT 351
Query: 388 AHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGH 447
H + GF + + ALI +Y + G L SA ++F+ + K+V+SW ++I AY +G
Sbjct: 352 IHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGK 411
Query: 448 GHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRV 489
+ AL++F + S PD T +L A + + +++GR +
Sbjct: 412 NYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREI 453
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 194/449 (43%), Gaps = 66/449 (14%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAM------ 112
N I++ + G +A K+F+EMP+RD VS+NSMI+ YL D + +FK M
Sbjct: 169 NSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFK 228
Query: 113 ----------------------------------SERDVVAQSAMVDGYAKAGRLDNARE 138
DV+ ++++D Y+K G + A
Sbjct: 229 PDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAER 288
Query: 139 VFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERS-----VVTWTTMVSGFA-QN 192
+F+ M +RN +W +I Y R GR +A F +MSE++ V+T ++ A
Sbjct: 289 IFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE 348
Query: 193 GLVDHA---RRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMIS 249
G H RR F +P + + TA++ Y + GQ +F M E+NV SWN +I+
Sbjct: 349 GRTIHGYAMRRGF--LP--HMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIA 404
Query: 250 GCLSANRVDEAIHLFETM------PDRNHVS--WTAMVSGLAQNKMVEVARKYFDIMPFK 301
+ + A+ LF+ + PD ++ A L+ ++ E+ +
Sbjct: 405 AYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWS 464
Query: 302 DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILML 361
+ ++++ Y L +A + FN + K+V WN+II Y +G ++ LF M+
Sbjct: 465 NTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMI 524
Query: 362 RSCFRPCVTTMTSIITSC--DGMVEIMQAH--AMVIHLGFEQNTWVTNALITLYSKSGDL 417
S P +T S++ +C GMV+ + +M G + ++ L ++G+
Sbjct: 525 ASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNF 584
Query: 418 CSAMLVFELLKSKDVVS-WTAMIVAYANH 445
+A E + W +++ A NH
Sbjct: 585 SAAKRFLEEMPFVPTARIWGSLLNASRNH 613
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 105/203 (51%), Gaps = 3/203 (1%)
Query: 290 VARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGE 349
V R + + + A + + + D +L+ +AL+LF+ + + + +WN +I G+ G
Sbjct: 51 VLRDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGL 110
Query: 350 AGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQA---HAMVIHLGFEQNTWVTNA 406
EA++ + M+ + + T +I S G+ + + HAMVI LGF + +V N+
Sbjct: 111 YIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNS 170
Query: 407 LITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPD 466
LI+LY K G A VFE + +D+VSW +MI Y G G +L +F M+ G KPD
Sbjct: 171 LISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPD 230
Query: 467 EITFVGLLSACSHAGLVNQGRRV 489
+ + L ACSH G+ +
Sbjct: 231 RFSTMSALGACSHVYSPKMGKEI 253
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 258 bits (660), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 174/605 (28%), Positives = 297/605 (49%), Gaps = 70/605 (11%)
Query: 74 ARKLFDEMPQR--DAVSYNSMIAVYLKNKDVHGAETIFKAMSERDV----VAQSAMVDGY 127
AR +FDE+P + ++++ MI Y N A ++ M V ++
Sbjct: 54 ARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKAC 113
Query: 128 AKAGRLDNAREVFDNMT----ERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWT 183
A +D+ + + ++ + + T+L+ Y +CG E A+++FD+M +R +V W
Sbjct: 114 AGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWN 173
Query: 184 TMVSGFAQN-------GLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEM 236
M+SGF+ + GL RR L P +TI M + G EG +
Sbjct: 174 AMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTI--VGMFPALGRAGALREGKAVHGYC 231
Query: 237 PERNVRSWNVMISGCLSANRVDEAI----HLFETMPDRNHVSWTAMVSGLAQNKMVEVAR 292
+ V+ +G L + I +F+ +N V+W+AM+ G +N+M++ A
Sbjct: 232 TRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAG 291
Query: 293 KYFDIMPFKDMAAW-----------------------------------------SAMIT 311
+ F M D A + +I+
Sbjct: 292 EVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIIS 351
Query: 312 AYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTT 371
Y L +A F+ + K+V +N++I G V N E+ RLF M S RP +TT
Sbjct: 352 FYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITT 411
Query: 372 MTSIITSCDGMVEI---MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLK 428
+ ++T+C + + H + G+ NT + NAL+ +Y+K G L A VF+ +
Sbjct: 412 LLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMH 471
Query: 429 SKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRR 488
+D+VSW M+ + HG G AL +F M +G PDE+T + +LSACSH+GLV++G++
Sbjct: 472 KRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQ 531
Query: 489 VFDSI-KGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACK 547
+F+S+ +G +N+ +++HY+C+ D+L RAG ++EA D V+ + P E D VL LL AC
Sbjct: 532 LFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKM-PFEPDIRVLGTLLSACW 590
Query: 548 LHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGF 607
+ N ++ N + +K+ SL T+ VLLSN Y+A E+W++ A++R K++ + K G+
Sbjct: 591 TYKNAELGNEVSKKMQSLGETTE-SLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGY 649
Query: 608 SQIQV 612
S + V
Sbjct: 650 SWVDV 654
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 171/388 (44%), Gaps = 70/388 (18%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIA-------------VYLKNKDVHGAET- 107
+ + G+L+ A K+FDEMP+RD V++N+MI+ ++L + + G
Sbjct: 145 VDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPN 204
Query: 108 ------IFKAMS--------------------ERDVVAQSAMVDGYAKAGRLDNAREVFD 141
+F A+ D+V ++ ++D YAK+ + AR VFD
Sbjct: 205 LSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFD 264
Query: 142 NMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVS------GFAQNGLV 195
++N +W+++I GY +EA ++F QM V T V+ G A+ G +
Sbjct: 265 LDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDL 324
Query: 196 DHAR---------RFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNV 246
R F + +NTI + Y G + ++ F E+ ++V S+N
Sbjct: 325 SGGRCVHCYAVKAGFILDLTVQNTI-----ISFYAKYGSLCDAFRQFSEIGLKDVISYNS 379
Query: 247 MISGCLSANRVDEAIHLFETM------PD-RNHVSWTAMVSGLAQNKMVEVARKYFDIMP 299
+I+GC+ R +E+ LF M PD + S LA Y +
Sbjct: 380 LITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHG 439
Query: 300 FK-DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFI 358
+ + + +A++ Y L A +F+ + ++++ WNT++ G+ +G EAL LF
Sbjct: 440 YAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFN 499
Query: 359 LMLRSCFRPCVTTMTSIITSC--DGMVE 384
M + P T+ +I+++C G+V+
Sbjct: 500 SMQETGVNPDEVTLLAILSACSHSGLVD 527
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 104/247 (42%), Gaps = 50/247 (20%)
Query: 55 LRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKN--------------- 99
L +N I+ + G L +A + F E+ +D +SYNS+I + N
Sbjct: 343 LTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRT 402
Query: 100 ----KDVHGAETIFKAMSERDVVAQ--------------------SAMVDGYAKAGRLDN 135
D+ + A S + +A++D Y K G+LD
Sbjct: 403 SGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDV 462
Query: 136 AREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQ 191
A+ VFD M +R+ SW +++ G+ G +EAL LF+ M E V VT ++S +
Sbjct: 463 AKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSH 522
Query: 192 NGLVDHARRFFDLMP--EKNTIA----WTAMVKSYLDNGQFSEGYKLFLEMP-ERNVRSW 244
+GLVD ++ F+ M + N I + M G E Y +MP E ++R
Sbjct: 523 SGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVL 582
Query: 245 NVMISGC 251
++S C
Sbjct: 583 GTLLSAC 589
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 159/550 (28%), Positives = 282/550 (51%), Gaps = 40/550 (7%)
Query: 118 VAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTE---EALQ----L 170
++ + ++ K G+L A V + + ++ LI CG +AL+ +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLI---LCCGHRSSLSDALRVHRHI 103
Query: 171 FDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGY 230
D S++ T ++ ++ G VD+AR+ FD ++ W A+ ++ G E
Sbjct: 104 LDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVL 163
Query: 231 KLFLEMPERNVRSWNVMISGCLSANRVDEAI--HLFETMPDRNHVSWTAMVSGLAQNKMV 288
L+ +M V S + L A E HL + H++ S
Sbjct: 164 GLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSS-------- 215
Query: 289 EVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNG 348
+ IM + ++ Y + A +F +P +NV W+ +I Y +NG
Sbjct: 216 -----HVYIM--------TTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNG 262
Query: 349 EAGEALRLFILMLRSC--FRPCVTTMTSIITSCDGMVEIMQA---HAMVIHLGFEQNTWV 403
+A EALR F M+R P TM S++ +C + + Q H ++ G + V
Sbjct: 263 KAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPV 322
Query: 404 TNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGT 463
+AL+T+Y + G L VF+ + +DVVSW ++I +Y HG+G A+Q+F M+ +G
Sbjct: 323 ISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGA 382
Query: 464 KPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAM 523
P +TFV +L ACSH GLV +G+R+F+++ + + ++EHY+C+VD+LGRA ++EA
Sbjct: 383 SPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAA 442
Query: 524 DVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAE 583
+V + +E V +LLG+C++HGN+++A ++L +LEP ++G YVLL++ YA
Sbjct: 443 KMVQDM-RTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEA 501
Query: 584 EQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPL 643
+ WDE +V+K ++ + ++K+ G ++V+ K + F + +P +E+I+ FL + L
Sbjct: 502 QMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVK-LAED 560
Query: 644 MRETGYTPEN 653
M+E GY P+
Sbjct: 561 MKEKGYIPQT 570
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 159/378 (42%), Gaps = 76/378 (20%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAM----SE 114
N I L + GKLK+A ++ + +Y +I + A + + + S+
Sbjct: 50 NQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSD 109
Query: 115 RDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQM 174
+D + ++ Y+ G +D AR+VFD +R + W +L G EE L L+ +M
Sbjct: 110 QDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKM 169
Query: 175 ------SERSVVTW-------------------------------------TTMVSGFAQ 191
S+R T+ TT+V +A+
Sbjct: 170 NRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYAR 229
Query: 192 NGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGC 251
G VD+A F MP +N ++W+AM+ Y NG+ E + F EM S
Sbjct: 230 FGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDS-------- 281
Query: 252 LSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVE--VARKYFD-IMPFKDMAAWSA 308
S N V TM + + A ++ L Q K++ + R+ D I+P SA
Sbjct: 282 -SPNSV--------TMV--SVLQACASLAALEQGKLIHGYILRRGLDSILP-----VISA 325
Query: 309 MITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPC 368
++T Y L +F+ + +++V WN++I Y +G +A+++F ML + P
Sbjct: 326 LVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPT 385
Query: 369 VTTMTSIITSC--DGMVE 384
T S++ +C +G+VE
Sbjct: 386 PVTFVSVLGACSHEGLVE 403
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 101/241 (41%), Gaps = 51/241 (21%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAM------SER 115
+ + R G + A +F MP R+ VS+++MIA Y KN A F+ M S
Sbjct: 224 VDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSP 283
Query: 116 DVVAQ-----------------------------------SAMVDGYAKAGRLDNAREVF 140
+ V SA+V Y + G+L+ + VF
Sbjct: 284 NSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVF 343
Query: 141 DNMTERNAFSWTSLISGYFRCGRTEEALQLFDQM----SERSVVTWTTMVSGFAQNGLVD 196
D M +R+ SW SLIS Y G ++A+Q+F++M + + VT+ +++ + GLV+
Sbjct: 344 DRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVE 403
Query: 197 HARRFFDLMPEKNTIA-----WTAMVKSYLDNGQFSEGYKLFLEM-PERNVRSWNVMISG 250
+R F+ M + I + MV + E K+ +M E + W ++
Sbjct: 404 EGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGS 463
Query: 251 C 251
C
Sbjct: 464 C 464
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 26/221 (11%)
Query: 97 LKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLIS 156
+K K++H T + V + +VD YA+ G +D A VF M RN SW+++I+
Sbjct: 199 MKGKEIHAHLT--RRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIA 256
Query: 157 GYFRCGRTEEALQLFDQM------SERSVVTWTTMVSGFA-----QNGLVDHA---RRFF 202
Y + G+ EAL+ F +M S + VT +++ A + G + H RR
Sbjct: 257 CYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGL 316
Query: 203 D-LMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAI 261
D ++P +A+V Y G+ G ++F M +R+V SWN +IS +AI
Sbjct: 317 DSILP-----VISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAI 371
Query: 262 HLFETM----PDRNHVSWTAMVSGLAQNKMVEVARKYFDIM 298
+FE M V++ +++ + +VE ++ F+ M
Sbjct: 372 QIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETM 412
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 182/667 (27%), Positives = 315/667 (47%), Gaps = 106/667 (15%)
Query: 70 KLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSE--------------- 114
+ E+ ++F +P++++VS++++IA ++N + A FK M +
Sbjct: 230 RFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLR 289
Query: 115 ------------------------RDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFS 150
D + ++A +D YAK + +A+ +FDN N S
Sbjct: 290 SCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQS 349
Query: 151 WTSLISGYFRCGRTEEALQLF----------DQMSERSVVTWTTMVSGFAQNGLVDHARR 200
+ ++I+GY + +AL LF D++S V +V G ++ GL +
Sbjct: 350 YNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSE-GLQIYGLA 408
Query: 201 FFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEA 260
+ +A A + Y +E +++F EM R+ SWN +I+ + E
Sbjct: 409 IKSSLSLDVCVA-NAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYET 467
Query: 261 IHLFETM------PDR------------------NHVSWTAMVSGLAQNKMVEVARKYFD 296
+ LF +M PD + + + SG+A N V +
Sbjct: 468 LFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCS----- 522
Query: 297 IMPFKDMAAWSAMITAYVDEKL-------------LGEALELFNLVPEKNVGIWNTIIDG 343
DM + MI EK+ + E ++ N ++ WN+II G
Sbjct: 523 ---LIDMYSKCGMIEEA--EKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISG 577
Query: 344 YVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI---MQAHAMVIHLGFEQN 400
YV ++ +A LF M+ P T +++ +C + Q HA VI + +
Sbjct: 578 YVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSD 637
Query: 401 TWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVT 460
++ + L+ +YSK GDL + L+FE +D V+W AMI YA+HG G A+Q+F RM+
Sbjct: 638 VYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMIL 697
Query: 461 SGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVN 520
KP+ +TF+ +L AC+H GL+++G F +K Y L+ ++ HYS +VD+LG++G V
Sbjct: 698 ENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVK 757
Query: 521 EAMDVVSTIPPSEIDEAVLVALLGACKLH-GNIKVANSIGQKLLSLEPTSSGGYVLLSNA 579
A++++ + P E D+ + LLG C +H N++VA LL L+P S Y LLSN
Sbjct: 758 RALELIREM-PFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNV 816
Query: 580 YAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIY---GFL 636
YA W++ + +R+ M+ +KK G S +++K + H+F VG+++HP+ EEIY G +
Sbjct: 817 YADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLI 876
Query: 637 QQSLQPL 643
++P
Sbjct: 877 YSEMKPF 883
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/468 (26%), Positives = 219/468 (46%), Gaps = 43/468 (9%)
Query: 90 NSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAF 149
N ++ VY ++D A +F M RDVV+ + M++GY+K+ + A F+ M R+
Sbjct: 87 NCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVV 146
Query: 150 SWTSLISGYFRCGRTEEALQLFDQMSERSV------VTWTTMVSGFAQN---GLVDHARR 200
SW S++SGY + G + +++++F M + V F ++ G+ H
Sbjct: 147 SWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHG-I 205
Query: 201 FFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEA 260
+ + + +A +A++ Y +F E ++F +PE+N SW+ +I+GC+ N + A
Sbjct: 206 VVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLA 265
Query: 261 IHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFK------------DMAAWSA 308
+ F+ M N +G++Q+ V R + + D AA
Sbjct: 266 LKFFKEMQKVN--------AGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGI 317
Query: 309 MITAYVDEKL----LGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSC 364
+ TA +D + +A LF+ N +N +I GY + +AL LF ++ S
Sbjct: 318 VRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSG 377
Query: 365 FRPCVTTMTSIITSC---DGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAM 421
+++ + +C G+ E +Q + + I + V NA I +Y K L A
Sbjct: 378 LGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAF 437
Query: 422 LVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAG 481
VF+ ++ +D VSW A+I A+ +G G+ L +F M+ S +PDE TF +L AC+ G
Sbjct: 438 RVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GG 496
Query: 482 LVNQGRRVFDSI-KGAYNLNLKVEHYSC-LVDMLGRAGLVNEAMDVVS 527
+ G + SI K N V C L+DM + G++ EA + S
Sbjct: 497 SLGYGMEIHSSIVKSGMASNSSV---GCSLIDMYSKCGMIEEAEKIHS 541
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 134/561 (23%), Positives = 232/561 (41%), Gaps = 117/561 (20%)
Query: 74 ARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRL 133
A +FD+MP RD VS+N MI Y K+ D+ A + F M RDVV+ ++M+ GY + G
Sbjct: 102 ASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGES 161
Query: 134 DNAREVFDNM---------------------------------------TERNAFSWTSL 154
+ EVF +M + + + ++L
Sbjct: 162 LKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASAL 221
Query: 155 ISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNT---- 210
+ Y + R E+L++F + E++ V+W+ +++G QN L+ A +FF M + N
Sbjct: 222 LDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQ 281
Query: 211 -----------------------------------IAWTAMVKSYLDNGQFSEGYKLFLE 235
I TA + Y + LF
Sbjct: 282 SIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDN 341
Query: 236 MPERNVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWT------AMVSGLAQN 285
N +S+N MI+G +A+ LF + + +S + A+V GL++
Sbjct: 342 SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEG 401
Query: 286 KMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYV 345
+++ D+ +A I Y + L EA +F+ + ++ WN II +
Sbjct: 402 --LQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHE 459
Query: 346 RNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDG--MVEIMQAHAMVIHLGFEQNTWV 403
+NG+ E L LF+ MLRS P T SI+ +C G + M+ H+ ++ G N+ V
Sbjct: 460 QNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSV 519
Query: 404 TNALITLYSKSG----------------DLCSAMLVFELLKSKDV----VSWTAMIVAYA 443
+LI +YSK G ++ M E + +K + VSW ++I Y
Sbjct: 520 GCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYV 579
Query: 444 NHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKV 503
A +F RM+ G PD+ T+ +L C++ G+++ + L+
Sbjct: 580 MKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQV---IKKELQS 636
Query: 504 EHYSC--LVDMLGRAGLVNEA 522
+ Y C LVDM + G ++++
Sbjct: 637 DVYICSTLVDMYSKCGDLHDS 657
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 171/359 (47%), Gaps = 45/359 (12%)
Query: 210 TIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPD 269
T +++ Y ++ F +F +MP R+V SWN MI+G +N + +A F MP
Sbjct: 83 TFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPV 142
Query: 270 RNHVSWTAMVSGLAQN----KMVEV------------ARKYFDIMPF------------- 300
R+ VSW +M+SG QN K +EV R + I+
Sbjct: 143 RDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQI 202
Query: 301 ----------KDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEA 350
D+ A SA++ Y K E+L +F +PEKN W+ II G V+N
Sbjct: 203 HGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLL 262
Query: 351 GEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIM---QAHAMVIHLGFEQNTWVTNAL 407
AL+ F M + + S++ SC + E+ Q HA + F + V A
Sbjct: 263 SLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTAT 322
Query: 408 ITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDE 467
+ +Y+K ++ A ++F+ ++ + S+ AMI Y+ HG AL +F R+++SG DE
Sbjct: 323 LDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDE 382
Query: 468 ITFVGLLSACSHAGLVNQGRRVFD-SIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDV 525
I+ G+ AC+ +++G +++ +IK + +L++ V + + +DM G+ + EA V
Sbjct: 383 ISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAA--IDMYGKCQALAEAFRV 439
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 147/362 (40%), Gaps = 82/362 (22%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIF--------- 109
N I + G+ L EA ++FDEM +RDAVS+N++IA + +N G ET+F
Sbjct: 421 NAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG--KGYETLFLFVSMLRSR 478
Query: 110 ---------------------KAMSERDVVAQSAM----------VDGYAKAGRLDNARE 138
M + +S M +D Y+K G ++ A +
Sbjct: 479 IEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEK 538
Query: 139 VFDNMTERN--------------------AFSWTSLISGYFRCGRTEEALQLFDQMSERS 178
+ +R SW S+ISGY ++E+A LF +M E
Sbjct: 539 IHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMG 598
Query: 179 VV----TWTTMV---SGFAQNGLVD--HARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEG 229
+ T+ T++ + A GL HA+ + I T +V Y G +
Sbjct: 599 ITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICST-LVDMYSKCGDLHDS 657
Query: 230 YKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM----PDRNHVSWTAMVSGLAQN 285
+F + R+ +WN MI G + +EAI LFE M NHV++ +++ A
Sbjct: 658 RLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHM 717
Query: 286 KMVEVARKYFDIMPFK-----DMAAWSAMITAYVDEKLLGEALELFNLVP-EKNVGIWNT 339
+++ +YF +M + +S M+ + ALEL +P E + IW T
Sbjct: 718 GLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRT 777
Query: 340 II 341
++
Sbjct: 778 LL 779
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 86/211 (40%), Gaps = 37/211 (17%)
Query: 370 TTMTSIITSC--DGMVEI-MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFEL 426
T + + C G +E+ QAHA +I GF T+V N L+ +Y+ S D SA +VF+
Sbjct: 49 TNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDK 108
Query: 427 LKSKDVVSWTAMIVAYA-------------------------------NHGHGHHALQVF 455
+ +DVVSW MI Y+ +G +++VF
Sbjct: 109 MPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVF 168
Query: 456 ARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGR 515
M G + D TF +L CS + G ++ I + V S L+DM +
Sbjct: 169 VDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQI-HGIVVRVGCDTDVVAASALLDMYAK 227
Query: 516 AGLVNEAMDVVSTIPPSEIDEAVLVALLGAC 546
E++ V IP E + A++ C
Sbjct: 228 GKRFVESLRVFQGIP--EKNSVSWSAIIAGC 256
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/356 (37%), Positives = 215/356 (60%), Gaps = 7/356 (1%)
Query: 302 DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILML 361
D +A++T Y + A ++F+ +PEK++ WN+++ G+ +NG A EA+++F M
Sbjct: 141 DTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMR 200
Query: 362 RSCFRPCVTTMTSIITSC--DGMVEIMQ-AHAMVIHLGFEQNTWVTNALITLYSKSGDLC 418
S F P T S++++C G V + H +I G + N + ALI LYS+ GD+
Sbjct: 201 ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVG 260
Query: 419 SAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTS-GTKPDEITFVGLLSAC 477
A VF+ +K +V +WTAMI AY HG+G A+++F +M G P+ +TFV +LSAC
Sbjct: 261 KAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSAC 320
Query: 478 SHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPS--EID 535
+HAGLV +GR V+ + +Y L VEH+ C+VDMLGRAG ++EA + + +
Sbjct: 321 AHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATA 380
Query: 536 EAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKR 595
A+ A+LGACK+H N + I ++L++LEP + G +V+LSN YA + DE + +R
Sbjct: 381 PALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDG 440
Query: 596 MKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTP 651
M N++K G+S I+V+ K ++F +G+ SH + EIY +L ++L +E GY P
Sbjct: 441 MMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYL-ETLISRCKEIGYAP 495
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 139/286 (48%), Gaps = 11/286 (3%)
Query: 271 NHVSWTAMVSGLAQNKMVEVARKYFDIMPF-KDMAAWSAMITAYVDEKLLGEALELFNLV 329
N ++ A+V + K ++ + + + + + + +IT + + LF V
Sbjct: 8 NSAAYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSV 67
Query: 330 PEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI---- 385
P + ++N++I + + + ML S P T TS+I SC + +
Sbjct: 68 PLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGK 127
Query: 386 -MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYAN 444
+ HA+V GF +T+V AL+T YSK GD+ A VF+ + K +V+W +++ +
Sbjct: 128 GVHCHAVVS--GFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQ 185
Query: 445 HGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVE 504
+G A+QVF +M SG +PD TFV LLSAC+ G V+ G V I L+L V+
Sbjct: 186 NGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISE-GLDLNVK 244
Query: 505 HYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHG 550
+ L+++ R G V +A +V + E + A A++ A HG
Sbjct: 245 LGTALINLYSRCGDVGKAREVFDKM--KETNVAAWTAMISAYGTHG 288
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 13/196 (6%)
Query: 116 DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMS 175
D Q+A+V Y+K G ++ AR+VFD M E++ +W SL+SG+ + G +EA+Q+F QM
Sbjct: 141 DTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMR 200
Query: 176 ERSV----VTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFS 227
E T+ +++S AQ G V + + N TA++ Y G
Sbjct: 201 ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVG 260
Query: 228 EGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM-----PDRNHVSWTAMVSGL 282
+ ++F +M E NV +W MIS + +A+ LF M P N+V++ A++S
Sbjct: 261 KAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSAC 320
Query: 283 AQNKMVEVARKYFDIM 298
A +VE R + M
Sbjct: 321 AHAGLVEEGRSVYKRM 336
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 116/264 (43%), Gaps = 26/264 (9%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQS 121
+T + G ++ AR++FD MP++ V++NS+++ + +N A +F M E S
Sbjct: 149 VTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDS 208
Query: 122 A----MVDGYAKAGRLDNA----REVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQ 173
A ++ A+ G + + + + N T+LI+ Y RCG +A ++FD+
Sbjct: 209 ATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDK 268
Query: 174 MSERSVVTWTTMVSGFAQNGLVDHARRFFDLM-----PEKNTIAWTAMVKSYLDNGQFSE 228
M E +V WT M+S + +G A F+ M P N + + A++ + G E
Sbjct: 269 MKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEE 328
Query: 229 GYKLFLEMPER-----NVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVS----WTAMV 279
G ++ M + V M+ A +DEA + + WTAM+
Sbjct: 329 GRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAML 388
Query: 280 SGLAQNKM----VEVARKYFDIMP 299
++ VE+A++ + P
Sbjct: 389 GACKMHRNYDLGVEIAKRLIALEP 412
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 8/164 (4%)
Query: 185 MVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSW 244
+V+ +++ G ++ AR+ FD MPEK+ +AW ++V + NG E ++F +M E
Sbjct: 148 LVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPD 207
Query: 245 NVMISGCLSANRVDEAI--------HLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFD 296
+ LSA A+ ++ D N TA+++ ++ V AR+ FD
Sbjct: 208 SATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFD 267
Query: 297 IMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTI 340
M ++AAW+AMI+AY +A+ELFN + + I N +
Sbjct: 268 KMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNV 311
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 160/544 (29%), Positives = 271/544 (49%), Gaps = 27/544 (4%)
Query: 116 DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMS 175
DVV S++V YAK +N+ +VFD M ER+ SW ++IS +++ G E+AL+LF +M
Sbjct: 141 DVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRME 200
Query: 176 ----ERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFS 227
E + V+ T +S ++ ++ + +K + +A+V Y
Sbjct: 201 SSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLE 260
Query: 228 EGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM------PDRNHVSWTAMVSG 281
++F +MP +++ +WN MI G ++ + + M P + ++ M
Sbjct: 261 VAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACS 320
Query: 282 LAQN----KMVE--VARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVG 335
++N K + V R + D+ ++I Y A +F+ +
Sbjct: 321 RSRNLLHGKFIHGYVIRSVVN----ADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAE 376
Query: 336 IWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI---MQAHAMV 392
WN +I Y+ G +A+ ++ M+ +P V T TS++ +C + + Q H +
Sbjct: 377 SWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSI 436
Query: 393 IHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHAL 452
E + + +AL+ +YSK G+ A +F + KDVVSWT MI AY +HG AL
Sbjct: 437 SESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREAL 496
Query: 453 QVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDM 512
F M G KPD +T + +LSAC HAGL+++G + F ++ Y + +EHYSC++D+
Sbjct: 497 YQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDI 556
Query: 513 LGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGG 572
LGRAG + EA +++ P + + +L L AC LH + + I + L+ P +
Sbjct: 557 LGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDAST 616
Query: 573 YVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEI 632
Y++L N YA+ E WD +VR +MKE ++K G S I++ K FF +RSH + E +
Sbjct: 617 YMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENV 676
Query: 633 YGFL 636
Y L
Sbjct: 677 YECL 680
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 128/463 (27%), Positives = 220/463 (47%), Gaps = 26/463 (5%)
Query: 115 RDVVAQSAMVDGYAKAGRLDNAREVFDNMTER-NAFSWTSLISGYFRCGRTEEALQLFDQ 173
RDVV ++++ Y +AR VF+N R + + W SL+SGY + + L++F +
Sbjct: 37 RDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKR 96
Query: 174 MSERSVV-----TWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNG 224
+ S+ T+ ++ + G R L+ + + + +++V Y
Sbjct: 97 LLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFN 156
Query: 225 QFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMP----DRNHVSWTAMVS 280
F ++F EMPER+V SWN +IS + ++A+ LF M + N VS T +S
Sbjct: 157 LFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAIS 216
Query: 281 GLAQ----NKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGI 336
++ + E+ RK D SA++ Y L A E+F +P K++
Sbjct: 217 ACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVA 276
Query: 337 WNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQA---HAMVI 393
WN++I GYV G++ + + M+ RP TT+TSI+ +C ++ H VI
Sbjct: 277 WNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVI 336
Query: 394 HLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQ 453
+ +V +LI LY K G+ A VF + SW MI +Y + G+ A++
Sbjct: 337 RSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVE 396
Query: 454 VFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDML 513
V+ +MV+ G KPD +TF +L ACS + +G+++ SI + L S L+DM
Sbjct: 397 VYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISES-RLETDELLLSALLDMY 455
Query: 514 GRAGLVNEAMDVVSTIPPSEIDE-AVLVALLGACKLHGNIKVA 555
+ G EA + ++IP ++ V+++ G+ HG + A
Sbjct: 456 SKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGS---HGQPREA 495
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/479 (21%), Positives = 207/479 (43%), Gaps = 70/479 (14%)
Query: 76 KLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMS---------------------- 113
++FDEMP+RD S+N++I+ + ++ + A +F M
Sbjct: 163 QVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLL 222
Query: 114 -----------------ERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLIS 156
E D SA+VD Y K L+ AREVF M ++ +W S+I
Sbjct: 223 WLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIK 282
Query: 157 GYFRCGRTEEALQLFDQM----SERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEK---- 208
GY G ++ +++ ++M + S T T+++ +++ + H + +
Sbjct: 283 GYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNA 342
Query: 209 NTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM- 267
+ +++ Y G+ + +F + + SWNVMIS +S +A+ +++ M
Sbjct: 343 DIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMV 402
Query: 268 -----PDRNHVSWTAMVSGLAQNKMVEVARK-YFDIMPFK---DMAAWSAMITAYVDEKL 318
PD V++T+++ +Q +E ++ + I + D SA++ Y
Sbjct: 403 SVGVKPDV--VTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGN 460
Query: 319 LGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITS 378
EA +FN +P+K+V W +I Y +G+ EAL F M + +P T+ +++++
Sbjct: 461 EKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSA 520
Query: 379 CD--GMVE--IMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVS 434
C G+++ + M G E + +I + ++G L A +E+++ S
Sbjct: 521 CGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEA---YEIIQQTPETS 577
Query: 435 WTAMIVAY---ANHGHGHHAL-QVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRV 489
A +++ A H H+L AR++ D T++ L + + + RRV
Sbjct: 578 DNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRV 636
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 109/233 (46%), Gaps = 31/233 (13%)
Query: 59 NVEITILGRRGKLKEARKLFDEMP----QRDAVSYNSMI------AVYLKNKDVHGAETI 108
NV I+ G +A +++D+M + D V++ S++ A K K +H +I
Sbjct: 379 NVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIH--LSI 436
Query: 109 FKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEAL 168
++ E D + SA++D Y+K G A +F+++ +++ SWT +IS Y G+ EAL
Sbjct: 437 SESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREAL 496
Query: 169 QLFDQMSERSV----VTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIA-----WTAMVKS 219
FD+M + + VT ++S GL+D +FF M K I ++ M+
Sbjct: 497 YQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDI 556
Query: 220 YLDNGQFSEGYKLFLEMPER--NVRSWNVMISGCLSANRVDEAIHLFETMPDR 270
G+ E Y++ + PE N + + S C +HL ++ DR
Sbjct: 557 LGRAGRLLEAYEIIQQTPETSDNAELLSTLFSAC--------CLHLEHSLGDR 601
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 361 LRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSA 420
L S R C + S + I H ++ LG ++ + +LI +Y D CSA
Sbjct: 6 LLSLLRECTNSTKS-------LRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSA 58
Query: 421 MLVFELLKSK-DVVSWTAMIVAYANHGHGHHALQVFARMV-TSGTKPDEITFVGLLSACS 478
VFE + DV W +++ Y+ + H L+VF R++ S PD TF ++ A
Sbjct: 59 RHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYG 118
Query: 479 HAGLVNQGRRVFD-SIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEI 534
G GR + +K Y ++ V S LV M + L ++ V +P ++
Sbjct: 119 ALGREFLGRMIHTLVVKSGYVCDVVVA--SSLVGMYAKFNLFENSLQVFDEMPERDV 173
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 167/537 (31%), Positives = 279/537 (51%), Gaps = 31/537 (5%)
Query: 139 VFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHA 198
+F + N F + SLI+G+ E L LF + + + + +
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 199 RRF-FDLMP-------EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISG 250
R+ DL + A T+++ Y +G+ ++ +KLF E+P+R+V +W + SG
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 251 CLSANRVDEAIHLFETM------PDRNHV----SWTAMVSGLAQNKMVEVARKYFDIMPF 300
++ R EAI LF+ M PD + S V L + + KY + M
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWI---VKYMEEMEM 243
Query: 301 -KDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFIL 359
K+ + ++ Y + +A +F+ + EK++ W+T+I GY N E + LF+
Sbjct: 244 QKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQ 303
Query: 360 MLRSCFRPCVTTMTSIITSCD--GMVEIMQ-AHAMVIHLGFEQNTWVTNALITLYSKSGD 416
ML+ +P ++ ++SC G +++ + +++ F N ++ NALI +Y+K G
Sbjct: 304 MLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGA 363
Query: 417 LCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSA 476
+ VF+ +K KD+V A I A +GH + VF + G PD TF+GLL
Sbjct: 364 MARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCG 423
Query: 477 CSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIP--PSEI 534
C HAGL+ G R F++I Y L VEHY C+VD+ GRAG++++A ++ +P P+ I
Sbjct: 424 CVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAI 483
Query: 535 DEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRK 594
V ALL C+L + ++A ++ ++L++LEP ++G YV LSN Y+ +WDE A+VR
Sbjct: 484 ---VWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRD 540
Query: 595 RMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTP 651
M +K +KKI G+S I+++GK H F ++SHP ++IY L+ L MR G+ P
Sbjct: 541 MMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLED-LGNEMRLMGFVP 596
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 156/348 (44%), Gaps = 38/348 (10%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQS 121
++I G+L +A KLFDE+P R V++ ++ + Y + A +FK M E V S
Sbjct: 153 LSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDS 212
Query: 122 AMV----DGYAKAGRLDNAREVFDNMTE----RNAFSWTSLISGYFRCGRTEEALQLFDQ 173
+ G LD+ + M E +N+F T+L++ Y +CG+ E+A +FD
Sbjct: 213 YFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDS 272
Query: 174 MSERSVVTWTTMVSGFAQNGLVDHARRFF------DLMPEKNTIAWTAMVKSYLDNGQFS 227
M E+ +VTW+TM+ G+A N F +L P++ +I + S G
Sbjct: 273 MVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSI--VGFLSSCASLGALD 330
Query: 228 EGYKLFLEMPER-----NVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGL 282
G + + + +R N+ N +I + +F+ M +++ V A +SGL
Sbjct: 331 LG-EWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGL 389
Query: 283 AQNKMVEVARKYF------DIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVP-----E 331
A+N V+++ F I P D + + ++ V L+ + L FN + +
Sbjct: 390 AKNGHVKLSFAVFGQTEKLGISP--DGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALK 447
Query: 332 KNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC 379
+ V + ++D + R G +A RL M RP ++++ C
Sbjct: 448 RTVEHYGCMVDLWGRAGMLDDAYRLICDMP---MRPNAIVWGALLSGC 492
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 168/416 (40%), Gaps = 94/416 (22%)
Query: 101 DVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFR 160
D+H + K DV A ++++ Y+ +GRL++A ++FD + +R+ +WT+L SGY
Sbjct: 132 DLH--SLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTT 189
Query: 161 CGRTEEALQLFDQMSERSVVT----------------------W---------------- 182
GR EA+ LF +M E V W
Sbjct: 190 SGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFV 249
Query: 183 -TTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNV 241
TT+V+ +A+ G ++ AR FD M EK+ + W+ M++ Y N EG +LFL+M + N+
Sbjct: 250 RTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENL 309
Query: 242 RSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFK 301
+ I G LS+ A+ L E W + + R F
Sbjct: 310 KPDQFSIVGFLSSCASLGALDLGE---------WGISL----------IDRHEF----LT 346
Query: 302 DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILML 361
++ +A+I Y + E+F + EK++ I N I G +NG + +F
Sbjct: 347 NLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTE 406
Query: 362 RSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAM 421
+ P +T ++ C HA +I G NA+ +Y+
Sbjct: 407 KLGISPDGSTFLGLLCGC--------VHAGLIQDGLR----FFNAISCVYA--------- 445
Query: 422 LVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSAC 477
LK + V + M+ + G A ++ M +P+ I + LLS C
Sbjct: 446 -----LK-RTVEHYGCMVDLWGRAGMLDDAYRLICDM---PMRPNAIVWGALLSGC 492
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 115/255 (45%), Gaps = 24/255 (9%)
Query: 58 RNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDV 117
R + + + GK+++AR +FD M ++D V++++MI Y N +F M + ++
Sbjct: 250 RTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENL 309
Query: 118 VAQSAMVDGY----AKAGRLDNAREVFDNMTER-----NAFSWTSLISGYFRCGRTEEAL 168
+ G+ A G LD E ++ +R N F +LI Y +CG
Sbjct: 310 KPDQFSIVGFLSSCASLGALDLG-EWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGF 368
Query: 169 QLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFF------DLMPEKNTIAWTAMVKSYLD 222
++F +M E+ +V +SG A+NG V + F + P+ +T + ++ +
Sbjct: 369 EVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGST--FLGLLCGCVH 426
Query: 223 NGQFSEGYKLFLEMP-----ERNVRSWNVMISGCLSANRVDEAIHLFETMPDR-NHVSWT 276
G +G + F + +R V + M+ A +D+A L MP R N + W
Sbjct: 427 AGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWG 486
Query: 277 AMVSGLAQNKMVEVA 291
A++SG K ++A
Sbjct: 487 ALLSGCRLVKDTQLA 501
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 170/562 (30%), Positives = 276/562 (49%), Gaps = 38/562 (6%)
Query: 90 NSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAF 149
N ++ +Y + + + A+ +F MSE + V+++ M+ YA+ G LD A +F M
Sbjct: 122 NCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDK 181
Query: 150 SWTSLISGYFRCGRTEEALQLFDQMSERSVVTW--------TTMVSGFAQNGLVDHARRF 201
+S+ + + AL Q+ + T +V+ + + G + A+R
Sbjct: 182 PPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRV 241
Query: 202 FDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAI 261
FD M K +A T ++ Y G+ + KLF+++ V + + S L A E +
Sbjct: 242 FDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEEL 301
Query: 262 HLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGE 321
+L + + A V+ L V V D Y+
Sbjct: 302 NLGKQI--------HACVAKLGLESEVSVGTPLVDF---------------YIKCSSFES 338
Query: 322 ALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVT--TMTSIITSC 379
A F + E N W+ II GY + + EA++ F LRS + T TSI +C
Sbjct: 339 ACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTF-KSLRSKNASILNSFTYTSIFQAC 397
Query: 380 DGMVEIM---QAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWT 436
+ + Q HA I + + +ALIT+YSK G L A VFE + + D+V+WT
Sbjct: 398 SVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWT 457
Query: 437 AMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGA 496
A I +A +G+ AL++F +MV+ G KP+ +TF+ +L+ACSHAGLV QG+ D++
Sbjct: 458 AFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRK 517
Query: 497 YNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVAN 556
YN+ ++HY C++D+ R+GL++EA+ + + P E D L C H N+++
Sbjct: 518 YNVAPTIDHYDCMIDIYARSGLLDEALKFMKNM-PFEPDAMSWKCFLSGCWTHKNLELGE 576
Query: 557 SIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKN 616
G++L L+P + GYVL N Y +W+E A++ K M E+ +KK S IQ KGK
Sbjct: 577 IAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKI 636
Query: 617 HLFFVGERSHPQVEEIYGFLQQ 638
H F VG++ HPQ +EIY L++
Sbjct: 637 HRFIVGDKHHPQTQEIYEKLKE 658
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 151/463 (32%), Positives = 252/463 (54%), Gaps = 24/463 (5%)
Query: 195 VDHARRFFDLMPEKNTIAWTAMVKSYLDNGQF--SEGYKLFLEMPERNVRSWNVMI---- 248
+ +AR FD NT + A++ +Y + S + F M R+V N I
Sbjct: 73 LSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLV 132
Query: 249 -------SGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQN-KMVEVARKYFDIMPF 300
S S V HLF++ V TA++ A + + +AR+ FD M
Sbjct: 133 LKSTPYLSSAFSTPLVH--THLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSE 190
Query: 301 KDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILM 360
+++ +W+AM++ Y + A+ LF +PE++V WN I+ +NG EA+ LF M
Sbjct: 191 RNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRM 250
Query: 361 L-RSCFRPCVTTMTSIITSC--DGMVEIMQA-HAMVIHLGFEQNTWVTNALITLYSKSGD 416
+ RP T+ ++++C G +++ + HA + +V+N+L+ LY K G+
Sbjct: 251 INEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGN 310
Query: 417 LCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMV---TSGTKPDEITFVGL 473
L A VF++ K + +W +MI +A HG A+ VF M+ + KPD ITF+GL
Sbjct: 311 LEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGL 370
Query: 474 LSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSE 533
L+AC+H GLV++GR FD + + + ++EHY CL+D+LGRAG +EA++V+ST+ +
Sbjct: 371 LNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTM-KMK 429
Query: 534 IDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVR 593
DEA+ +LL ACK+HG++ +A + L++L P + G +++N Y W+E + R
Sbjct: 430 ADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRAR 489
Query: 594 KRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFL 636
K +K +N K G+S+I++ + H F+ ++SHP+ EEIY L
Sbjct: 490 KMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMIL 532
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 140/294 (47%), Gaps = 40/294 (13%)
Query: 167 ALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQF 226
A QLFD+MSER+VV+WT M+SG+A++G + +A F+ MPE++ +W A++ + NG F
Sbjct: 181 ARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLF 240
Query: 227 SEGYKLFLEM-PERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQN 285
E LF M E ++R N V+ ++S AQ
Sbjct: 241 LEAVSLFRRMINEPSIRP---------------------------NEVTVVCVLSACAQT 273
Query: 286 KMVEVARKYFDIMPFKDMAA----WSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTII 341
+++A+ +D+++ ++++ Y L EA +F + +K++ WN++I
Sbjct: 274 GTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMI 333
Query: 342 DGYVRNGEAGEALRLFILMLR---SCFRPCVTTMTSIITSCD--GMVEIMQAH--AMVIH 394
+ + +G + EA+ +F M++ + +P T ++ +C G+V + + M
Sbjct: 334 NCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNR 393
Query: 395 LGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSK-DVVSWTAMIVAYANHGH 447
G E LI L ++G A+ V +K K D W +++ A HGH
Sbjct: 394 FGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGH 447
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 125/290 (43%), Gaps = 54/290 (18%)
Query: 108 IFKAMSERDVVAQSAMVDGYAKA-GRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEE 166
+FK+ VV Q+A++ YA + + AR++FD M+ERN SWT+++SGY R G
Sbjct: 152 LFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISN 211
Query: 167 ALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLM-------PEKNTIAWT----- 214
A+ LF+ M ER V +W +++ QNGL A F M P + T+
Sbjct: 212 AVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACA 271
Query: 215 ----------------------------AMVKSYLDNGQFSEGYKLFLEMPERNVRSWNV 246
++V Y G E +F ++++ +WN
Sbjct: 272 QTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNS 331
Query: 247 MISGCLSANRVDEAIHLFETMPDRN-------HVSWTAMVSGLAQNKMVEVARKYFDIMP 299
MI+ R +EAI +FE M N H+++ +++ +V R YFD+M
Sbjct: 332 MINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMT 391
Query: 300 FK-----DMAAWSAMITAYVDEKLLGEALELFNLVPEK-NVGIWNTIIDG 343
+ + + +I EALE+ + + K + IW ++++
Sbjct: 392 NRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNA 441
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 21/223 (9%)
Query: 66 GRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAM-SERDV----VAQ 120
R G + A LF++MP+RD S+N+++A +N A ++F+ M +E + V
Sbjct: 204 ARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTV 263
Query: 121 SAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQLFDQMSE 176
++ A+ G L A+ + R + F SL+ Y +CG EEA +F S+
Sbjct: 264 VCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASK 323
Query: 177 RSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNT-------IAWTAMVKSYLDNGQFSEG 229
+S+ W +M++ FA +G + A F+ M + N I + ++ + G S+G
Sbjct: 324 KSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKG 383
Query: 230 YKLFLEMPERNVRSWNVMISGCL-----SANRVDEAIHLFETM 267
F M R + GCL A R DEA+ + TM
Sbjct: 384 RGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTM 426
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 162/564 (28%), Positives = 279/564 (49%), Gaps = 95/564 (16%)
Query: 183 TTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVR 242
T ++ + + GLV+ AR FD MP+++ +AWTAM+ Y + + ++ F EM ++
Sbjct: 49 TNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTS 108
Query: 243 SWNVMISGCLSANR-------------------------VDEAIH--------------- 262
+S L + R VD A+
Sbjct: 109 PNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACL 168
Query: 263 LFETMPDRNHVSWTAMVSGLA------------QNKMVEVARKYFDIMPF---------- 300
+F + +N V+WT +++G + ++E A ++ P+
Sbjct: 169 IFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENA----EVTPYCITIAVRASA 224
Query: 301 ---------------------KDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNT 339
++ ++++ Y L EA F+ + +K++ WNT
Sbjct: 225 SIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNT 284
Query: 340 IIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI---MQAHAMVIHLG 396
+I R+ ++ EAL +F F P T TS++ +C + + Q H + G
Sbjct: 285 LISELERS-DSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRG 343
Query: 397 FEQNTWVTNALITLYSKSGDLCSAMLVF-ELLKSKDVVSWTAMIVAYANHGHGHHALQVF 455
F +N + NALI +Y+K G++ + VF E++ +++VSWT+M++ Y +HG+G A+++F
Sbjct: 344 FNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELF 403
Query: 456 ARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGR 515
+MV+SG +PD I F+ +LSAC HAGLV +G + F+ ++ Y +N + Y+C+VD+LGR
Sbjct: 404 DKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGR 463
Query: 516 AGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHG-NIKVANSIGQKLLSLEPTSSGGYV 574
AG + EA ++V + P + DE+ A+LGACK H N ++ +K++ L+P G YV
Sbjct: 464 AGKIGEAYELVERM-PFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYV 522
Query: 575 LLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYG 634
+LS YAAE +W +FA+VRK M+ KK +G S I V+ + F V ++ P +Y
Sbjct: 523 MLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYS 582
Query: 635 FLQQSLQPLMRETGYTPENSLLID 658
L ++ RE GY PE L++
Sbjct: 583 VLGLLIEE-TREAGYVPELDSLVN 605
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 115/479 (24%), Positives = 207/479 (43%), Gaps = 82/479 (17%)
Query: 68 RGKLKEARKLFDEMPQRDAVSYNSMIAVYL-KNKDVHGAE------------------TI 108
+G ++EAR LFDEMP RD V++ +MI Y N + E ++
Sbjct: 58 KGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSV 117
Query: 109 FKAMSERDVVAQSAMVDG--------------------YAKAG-RLDNAREVFDNMTERN 147
K+ V+A A+V G YA ++ A +F ++ +N
Sbjct: 118 LKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKN 177
Query: 148 AFSWTSLISGYFRCGRTEEALQLFDQM-SERSVVTWTTMVSGFAQNGLVD--------HA 198
+WT+LI+G+ G L+++ QM E + VT + + +D HA
Sbjct: 178 DVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHA 237
Query: 199 ----RRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSA 254
R F +P N+I + Y G SE F EM ++++ +WN +IS L
Sbjct: 238 SVIKRGFQSNLPVMNSI-----LDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISE-LER 291
Query: 255 NRVDEAIHLFETMPDRNHV----SWTAMVSGLA--------QNKMVEVARKYFDIMPFKD 302
+ EA+ +F+ + V ++T++V+ A Q + R+ F+ K+
Sbjct: 292 SDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFN----KN 347
Query: 303 MAAWSAMITAYVDEKLLGEALELFN-LVPEKNVGIWNTIIDGYVRNGEAGEALRLFILML 361
+ +A+I Y + ++ +F +V +N+ W +++ GY +G EA+ LF M+
Sbjct: 348 VELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMV 407
Query: 362 RSCFRPCVTTMTSIITSCD--GMVE--IMQAHAMVIHLGFEQNTWVTNALITLYSKSGDL 417
S RP +++++C G+VE + + M G + + N ++ L ++G +
Sbjct: 408 SSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKI 467
Query: 418 CSAMLVFELLKSK-DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLS 475
A + E + K D +W A++ A H H ++ AR V KP + +LS
Sbjct: 468 GEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVME-LKPKMVGTYVMLS 525
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 118/235 (50%), Gaps = 7/235 (2%)
Query: 293 KYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGE 352
+Y P K + +I +Y ++ L+ EA LF+ +P+++V W +I GY +
Sbjct: 35 EYPPYKPKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNAR 94
Query: 353 ALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQA---HAMVIHLGFEQNTWVTNALIT 409
A F M++ P T++S++ SC M + H +V+ LG E + +V NA++
Sbjct: 95 AWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMN 154
Query: 410 LYSK-SGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEI 468
+Y+ S + +A L+F +K K+ V+WT +I + + G G L+++ +M+ +
Sbjct: 155 MYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPY 214
Query: 469 TFVGLLSACSHAGLVNQGRRVFDS-IKGAYNLNLKVEHYSCLVDMLGRAGLVNEA 522
+ A + V G+++ S IK + NL V + ++D+ R G ++EA
Sbjct: 215 CITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPV--MNSILDLYCRCGYLSEA 267
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 161/537 (29%), Positives = 268/537 (49%), Gaps = 56/537 (10%)
Query: 134 DNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV---------VTWTT 184
D + +F N ERN F +LI G R E +++ F M V V +
Sbjct: 77 DYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSN 136
Query: 185 MVSGFAQNGLVDHA---RRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNV 241
GF G HA + F D ++ ++V Y GQ +++F E P+R +
Sbjct: 137 SKLGFRWLGRALHAATLKNFVDC----DSFVRLSLVDMYAKTGQLKHAFQVFEESPDR-I 191
Query: 242 RSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFK 301
+ +++I W +++G + K + +A F MP +
Sbjct: 192 KKESILI--------------------------WNVLINGYCRAKDMHMATTLFRSMPER 225
Query: 302 DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILML 361
+ +WS +I YVD L A +LF L+PEKNV W T+I+G+ + G+ A+ + ML
Sbjct: 226 NSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEML 285
Query: 362 RSCFRPCVTTMTSIITSCD---GMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLC 418
+P T+ +++++C + ++ H ++ G + + + AL+ +Y+K G+L
Sbjct: 286 EKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELD 345
Query: 419 SAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACS 478
A VF + KD++SWTAMI +A HG H A+Q F +M+ SG KPDE+ F+ +L+AC
Sbjct: 346 CAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACL 405
Query: 479 HAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAV 538
++ V+ G FDS++ Y + ++HY +VD+LGRAG +NEA ++V +P + D
Sbjct: 406 NSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINP-DLTT 464
Query: 539 LVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVR----K 594
AL ACK H + A S+ Q LL L+P G Y+ L +A++ + + R K
Sbjct: 465 WAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQK 524
Query: 595 RMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTP 651
R+KE+++ G+S I++ G+ + F G+ SH +EI G + L + GY P
Sbjct: 525 RIKERSL----GWSYIELDGQLNKFSAGDYSHKLTQEI-GLKLDEIISLAIQKGYNP 576
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 148/308 (48%), Gaps = 61/308 (19%)
Query: 62 ITILGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSERDV 117
+ + + G+LK A ++F+E P R + +N +I Y + KD+H A T+F++M ER+
Sbjct: 168 VDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNS 227
Query: 118 VAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSER 177
+ S ++ GY +G L+ A+++F+ M E+N SWT+LI+G+ + G E A+ + +M E+
Sbjct: 228 GSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEK 287
Query: 178 SV---------------------------------------VTWTTMVSGFAQNGLVDHA 198
+ T +V +A+ G +D A
Sbjct: 288 GLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCA 347
Query: 199 RRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEM------PERNVRSWNVMISGCL 252
F M K+ ++WTAM++ + +G+F + + F +M P+ V + +++ CL
Sbjct: 348 ATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVV--FLAVLTACL 405
Query: 253 SANRVDEAIHLFETM-------PDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFK-DMA 304
+++ VD ++ F++M P H + +V L + + A + + MP D+
Sbjct: 406 NSSEVDLGLNFFDSMRLDYAIEPTLKH--YVLVVDLLGRAGKLNEAHELVENMPINPDLT 463
Query: 305 AWSAMITA 312
W+A+ A
Sbjct: 464 TWAALYRA 471
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 160/373 (42%), Gaps = 50/373 (13%)
Query: 90 NSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVF----DNMTE 145
NS + + +H A K + D + ++VD YAK G+L +A +VF D + +
Sbjct: 136 NSKLGFRWLGRALHAA--TLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKK 193
Query: 146 RNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLM 205
+ W LI+GY R A LF M ER+ +W+T++ G+ +G ++ A++ F+LM
Sbjct: 194 ESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELM 253
Query: 206 PEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAI---- 261
PEKN ++WT ++ + G + + EM E+ ++ I+ LSA A+
Sbjct: 254 PEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGI 313
Query: 262 ----HLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEK 317
++ + + TA+V A+ ++ A F M KD+ +W+AM
Sbjct: 314 RIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAM-------- 365
Query: 318 LLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIIT 377
I G+ +G +A++ F M+ S +P +++T
Sbjct: 366 -----------------------IQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLT 402
Query: 378 SCDGMVEIMQA----HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAM-LVFELLKSKDV 432
+C E+ +M + E ++ L ++G L A LV + + D+
Sbjct: 403 ACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDL 462
Query: 433 VSWTAMIVAYANH 445
+W A+ A H
Sbjct: 463 TTWAALYRACKAH 475
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 253 bits (647), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 161/500 (32%), Positives = 259/500 (51%), Gaps = 28/500 (5%)
Query: 120 QSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYF-RCGRTEEALQL-------- 170
Q+ ++ Y K D+A ++FD M RN +W LI G R G T L
Sbjct: 74 QNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRI 133
Query: 171 ------FDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNG 224
D +S ++ T + + G+ H + E + T++V Y G
Sbjct: 134 LFTDVSLDHVSFMGLIRLCTDSTNM-KAGIQLHCLMVKQGL-ESSCFPSTSLVHFYGKCG 191
Query: 225 QFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM-PDRN-----HVSWTAM 278
E ++F + +R++ WN ++S + +DEA L + M D+N + +++++
Sbjct: 192 LIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSL 251
Query: 279 VSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWN 338
+S + ++ F + D+ +A++ Y L +A E F + +NV WN
Sbjct: 252 LSACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWN 311
Query: 339 TIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC---DGMVEIMQAHAMVIHL 395
+I G+ +NGE EA+RLF ML +P T S+++SC + EI Q AMV
Sbjct: 312 AMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKK 371
Query: 396 GFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVF 455
G V N+LI+ YS++G+L A+L F ++ D+VSWT++I A A+HG +LQ+F
Sbjct: 372 GSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMF 431
Query: 456 ARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGR 515
M+ +PD+ITF+ +LSACSH GLV +G R F + Y + + EHY+CL+D+LGR
Sbjct: 432 ESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGR 490
Query: 516 AGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVL 575
AG ++EA DV++++ P+E L A G C +H + +KLL +EPT Y +
Sbjct: 491 AGFIDEASDVLNSM-PTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSI 549
Query: 576 LSNAYAAEEQWDEFAQVRKR 595
LSNAY +E W++ A +RKR
Sbjct: 550 LSNAYVSEGHWNQAALLRKR 569
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 150/324 (46%), Gaps = 65/324 (20%)
Query: 66 GRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKN-------------------------- 99
G+ G + EAR++F+ + RD V +N++++ Y+ N
Sbjct: 188 GKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFT 247
Query: 100 -------------KDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTER 146
K +H +FK + D+ +A+++ YAK+ L +ARE F++M R
Sbjct: 248 FSSLLSACRIEQGKQIHA--ILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVR 305
Query: 147 NAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHARRFF 202
N SW ++I G+ + G EA++LF QM ++ +T+ +++S A+ + ++
Sbjct: 306 NVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQ 365
Query: 203 DLMPEKNTIAW----TAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVD 258
++ +K + + +++ SY NG SE F + E ++ SW +I S +
Sbjct: 366 AMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAE 425
Query: 259 EAIHLFETM-----PDRNHVSWTAMVSGLAQNKMVEVARKYFDIMP-FKDMAAWSAMITA 312
E++ +FE+M PD+ +++ ++S + +V+ + F M F + A T
Sbjct: 426 ESLQMFESMLQKLQPDK--ITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTC 483
Query: 313 YVDEKLLG------EALELFNLVP 330
+D LLG EA ++ N +P
Sbjct: 484 LID--LLGRAGFIDEASDVLNSMP 505
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 162/378 (42%), Gaps = 67/378 (17%)
Query: 70 KLKEARKLFDEMPQRDAVSYNSMI-AVYLKNKDV-HGAETIFKAMS-------------- 113
+ +A KLFDEMP R+ V++N +I V ++ D H A F +S
Sbjct: 86 EFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSF 145
Query: 114 ----------------------------ERDVVAQSAMVDGYAKAGRLDNAREVFDNMTE 145
E +++V Y K G + AR VF+ + +
Sbjct: 146 MGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLD 205
Query: 146 RNAFSWTSLISGYFRCGRTEEALQLFDQMSER------SVVTWTTMVSGF-AQNGLVDHA 198
R+ W +L+S Y G +EA L M T+++++S + G HA
Sbjct: 206 RDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHA 265
Query: 199 RRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVD 258
F + + + TA++ Y + S+ + F M RNV SWN MI G
Sbjct: 266 -ILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGR 324
Query: 259 EAIHLFETM------PDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAW----SA 308
EA+ LF M PD +++ +++S A+ + ++ ++ K A + ++
Sbjct: 325 EAMRLFGQMLLENLQPDE--LTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANS 382
Query: 309 MITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPC 368
+I++Y L EAL F+ + E ++ W ++I +G A E+L++F ML+ +P
Sbjct: 383 LISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPD 441
Query: 369 VTTMTSIITSCD--GMVE 384
T ++++C G+V+
Sbjct: 442 KITFLEVLSACSHGGLVQ 459
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 129/289 (44%), Gaps = 22/289 (7%)
Query: 49 ISHDWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETI 108
+S+ + + + + + L +AR+ F+ M R+ VS+N+MI + +N + A +
Sbjct: 270 VSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRL 329
Query: 109 FKAM----SERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSW----TSLISGYFR 160
F M + D + ++++ AK + ++V +T++ + + SLIS Y R
Sbjct: 330 FGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSR 389
Query: 161 CGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEK---NTIAWTAMV 217
G EAL F + E +V+WT+++ A +G + + + F+ M +K + I + ++
Sbjct: 390 NGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQPDKITFLEVL 449
Query: 218 KSYLDNGQFSEGYKLFLEMP-----ERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNH 272
+ G EG + F M E + +I A +DEA + +MP
Sbjct: 450 SACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPS 509
Query: 273 VSWTAMVSGLA-----QNKMVEVARKYFDIMPFKDMAAWSAMITAYVDE 316
A +G + M A+K +I P K + +S + AYV E
Sbjct: 510 THALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPV-NYSILSNAYVSE 557
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 140/456 (30%), Positives = 262/456 (57%), Gaps = 24/456 (5%)
Query: 158 YFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMV 217
+ +CG A Q+FD++ + ++ + M+SG+ ++GLV M
Sbjct: 79 HLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRM------------ 126
Query: 218 KSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTA 277
SY +G+ ++GY L + + N R +++ L R+ A + + + + V TA
Sbjct: 127 -SY--SGEKADGYTLSMVLKASNSRGSTMILPRSLC--RLVHA-RIIKCDVELDDVLITA 180
Query: 278 MVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIW 337
+V ++ +E AR F+ M +++ ++MI+ Y+++ + +A E+FN K++ ++
Sbjct: 181 LVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVY 240
Query: 338 NTIIDGYVRNGE-AGEALRLFILMLRSCFRPCVTTMTSIITSCDGMV--EI-MQAHAMVI 393
N +++G+ R+GE A ++ ++I M R+ F P ++T S+I +C + E+ Q HA ++
Sbjct: 241 NAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIM 300
Query: 394 HLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQ 453
G + + ++L+ +Y+K G + A VF+ ++ K+V SWT+MI Y +G+ AL+
Sbjct: 301 KSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALE 360
Query: 454 VFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDML 513
+F RM +P+ +TF+G LSACSH+GLV++G +F+S++ Y++ K+EHY+C+VD++
Sbjct: 361 LFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLM 420
Query: 514 GRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTS-SGG 572
GRAG +N+A + + P D + ALL +C LHGN+++A+ +L L G
Sbjct: 421 GRAGDLNKAFEFARAM-PERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGA 479
Query: 573 YVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFS 608
Y+ LSN YA+ ++WD +++R+ MK + + K G S
Sbjct: 480 YLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 153/369 (41%), Gaps = 98/369 (26%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKN-------------------KDVHGAETIF 109
G L AR++FDE+P+ +YN MI+ YLK+ D + +
Sbjct: 83 GCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVL 142
Query: 110 KAMSER-------------------------DVVAQSAMVDGYAKAGRLDNAREVFDNMT 144
KA + R D V +A+VD Y K+G+L++AR VF+ M
Sbjct: 143 KASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMK 202
Query: 145 ERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDL 204
+ N TS+ISGY G E+A ++F+ + +V + MV GF+++G + A+R D+
Sbjct: 203 DENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSG--ETAKRSVDM 260
Query: 205 M---------PEKNTIA---------------------------------WTAMVKSYLD 222
P +T A ++++ Y
Sbjct: 261 YISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAK 320
Query: 223 NGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMP----DRNHVSWTAM 278
G ++ ++F +M E+NV SW MI G +EA+ LF M + N+V++
Sbjct: 321 CGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGA 380
Query: 279 VSGLAQNKMVEVARKYFDIMPF-----KDMAAWSAMITAYVDEKLLGEALELFNLVPEK- 332
+S + + +V+ + F+ M M ++ ++ L +A E +PE+
Sbjct: 381 LSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERP 440
Query: 333 NVGIWNTII 341
+ IW ++
Sbjct: 441 DSDIWAALL 449
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 119/275 (43%), Gaps = 50/275 (18%)
Query: 67 RRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDG 126
+ GKL+ AR +F+ M + V SMI+ Y+ V AE IF +D+V +AMV+G
Sbjct: 187 KSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEG 246
Query: 127 YAKAGRL------------------------------------DNAREVFDNMTERNAFS 150
++++G + ++V + + ++
Sbjct: 247 FSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYT 306
Query: 151 ----WTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMP 206
+SL+ Y +CG +A ++FDQM E++V +WT+M+ G+ +NG + A F M
Sbjct: 307 HIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMK 366
Query: 207 ----EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCL-----SANRV 257
E N + + + + +G +GY++F M + C+ A +
Sbjct: 367 EFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDL 426
Query: 258 DEAIHLFETMPDRNHVS-WTAMVSGLAQNKMVEVA 291
++A MP+R W A++S + VE+A
Sbjct: 427 NKAFEFARAMPERPDSDIWAALLSSCNLHGNVELA 461
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 160/392 (40%), Gaps = 88/392 (22%)
Query: 129 KAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMS------------- 175
K G L AR+VFD + + ++ +ISGY + G +E L L +MS
Sbjct: 81 KCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSM 140
Query: 176 --ERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLF 233
+ S +TM+ + LV HA R E + + TA+V +Y+ +G+ +F
Sbjct: 141 VLKASNSRGSTMILPRSLCRLV-HA-RIIKCDVELDDVLITALVDTYVKSGKLESARTVF 198
Query: 234 LEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARK 293
M + NV MISG ++ V++A +F T ++ V + AMV G +++ E A++
Sbjct: 199 ETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSG--ETAKR 256
Query: 294 YFDIMPFKDMAAW------------------------------------------SAMIT 311
D+ A + S+++
Sbjct: 257 SVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLD 316
Query: 312 AYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTT 371
Y + +A +F+ + EKNV W ++IDGY +NG EAL LF M P T
Sbjct: 317 MYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVT 376
Query: 372 MTSIITSCDGMVEIMQAHAMVIHLGFE-----QNTWVTN-------ALITLYSKSGDLCS 419
+++C +H+ ++ G+E Q + ++ L ++GDL
Sbjct: 377 FLGALSAC--------SHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNK 428
Query: 420 AMLVFELLKS----KDVVSWTAMIVAYANHGH 447
A FE ++ D W A++ + HG+
Sbjct: 429 A---FEFARAMPERPDSDIWAALLSSCNLHGN 457
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 187/630 (29%), Positives = 309/630 (49%), Gaps = 105/630 (16%)
Query: 100 KDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYF 159
+ VHG + K+ E V S++ D Y K G LD+A +VFD + +RNA +W +L+ GY
Sbjct: 193 RGVHG--YVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYV 250
Query: 160 RCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGLVD-----HARRFFDLMPEKNT 210
+ G+ EEA++LF M ++ V VT +T +S A G V+ HA + M E +
Sbjct: 251 QNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGM-ELDN 309
Query: 211 IAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMP-- 268
I T+++ Y G +F M E++V +WN++ISG + V++AI++ + M
Sbjct: 310 ILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLE 369
Query: 269 --DRNHVSWTAMVSGLAQNKMVEV-----------------------------------A 291
+ V+ ++S A+ + +++ A
Sbjct: 370 KLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDA 429
Query: 292 RKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELF-----NLVPEKNVGIWNTIIDGYVR 346
+K FD KD+ W+ ++ AY + L GEAL LF VP NV WN II +R
Sbjct: 430 KKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVP-PNVITWNLIILSLLR 488
Query: 347 NGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVE------------IMQ------- 387
NG+ EA +F+ M S P + + T+++ +GMV+ MQ
Sbjct: 489 NGQVDEAKDMFLQMQSSGIIPNLISWTTMM---NGMVQNGCSEEAILFLRKMQESGLRPN 545
Query: 388 -----------AHAMVIHLG----------FEQNTWVT--NALITLYSKSGDLCSAMLVF 424
AH +H+G + ++ V+ +L+ +Y+K GD+ A VF
Sbjct: 546 AFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVF 605
Query: 425 ELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVN 484
++ AMI AYA +G+ A+ ++ + G KPD IT +LSAC+HAG +N
Sbjct: 606 GSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDIN 665
Query: 485 QGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLG 544
Q +F I ++ +EHY +VD+L AG +A+ ++ + P + D ++ +L+
Sbjct: 666 QAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEM-PFKPDARMIQSLVA 724
Query: 545 ACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKI 604
+C ++ + + +KLL EP +SG YV +SNAYA E WDE ++R+ MK K +KK
Sbjct: 725 SCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKK 784
Query: 605 SGFSQIQVKGKN--HLFFVGERSHPQVEEI 632
G S IQ+ G+ H+F +++H ++ EI
Sbjct: 785 PGCSWIQITGEEGVHVFVANDKTHTRINEI 814
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 138/332 (41%), Gaps = 52/332 (15%)
Query: 217 VKSYLDNGQFSEGYKLFLEMPERNVRS----WNVMISGCLSANRVDEAIHLFETMPDRNH 272
V S NG+ E L EM RN+R + ++ GC+ + + H
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQI--------H 93
Query: 273 VSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEK 332
A+N+ +E + ++ Y L A LF+ + +
Sbjct: 94 ARILKNGDFYARNEYIE-----------------TKLVIFYAKCDALEIAEVLFSKLRVR 136
Query: 333 NVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQ----A 388
NV W II R G AL F+ ML + P + ++ +C G ++ +
Sbjct: 137 NVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKAC-GALKWSRFGRGV 195
Query: 389 HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHG 448
H V+ G E +V ++L +Y K G L A VF+ + ++ V+W A++V Y +G
Sbjct: 196 HGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKN 255
Query: 449 HHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRV----------FDSIKGAYN 498
A+++F+ M G +P +T LSA ++ G V +G++ D+I G
Sbjct: 256 EEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSL 315
Query: 499 LNLKVEHYSCLVDMLGRAGLVNEAM---DVVS 527
LN + C V ++ A +V + M DVV+
Sbjct: 316 LN-----FYCKVGLIEYAEMVFDRMFEKDVVT 342
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 80/195 (41%), Gaps = 6/195 (3%)
Query: 341 IDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC---DGMVEIMQAHAMVIHLG- 396
+ +NGE EAL L M R I+ C + Q HA ++ G
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGD 101
Query: 397 -FEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVF 455
+ +N ++ L+ Y+K L A ++F L+ ++V SW A+I G AL F
Sbjct: 102 FYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGF 161
Query: 456 ARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGR 515
M+ + PD + AC GR V + + L V S L DM G+
Sbjct: 162 VEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKS-GLEDCVFVASSLADMYGK 220
Query: 516 AGLVNEAMDVVSTIP 530
G++++A V IP
Sbjct: 221 CGVLDDASKVFDEIP 235
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 252 bits (644), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 148/437 (33%), Positives = 231/437 (52%), Gaps = 45/437 (10%)
Query: 245 NVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMA 304
N +ISG S+ D A LF+ D++ V+WTAM+ G +N A YF M +A
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVA 201
Query: 305 A----------------------------------------WSAMITAYVDEKLLGEALE 324
A S+++ Y +A +
Sbjct: 202 ANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQK 261
Query: 325 LFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVE 384
+F+ +P +NV W +I GYV++ + + +F ML+S P T++S++++C +
Sbjct: 262 VFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGA 321
Query: 385 IMQA---HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVA 441
+ + H +I E NT LI LY K G L A+LVFE L K+V +WTAMI
Sbjct: 322 LHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMING 381
Query: 442 YANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNL 501
+A HG+ A +F M++S P+E+TF+ +LSAC+H GLV +GRR+F S+KG +N+
Sbjct: 382 FAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEP 441
Query: 502 KVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQK 561
K +HY+C+VD+ GR GL+ EA ++ + P E V AL G+C LH + ++ +
Sbjct: 442 KADHYACMVDLFGRKGLLEEAKALIERM-PMEPTNVVWGALFGSCLLHKDYELGKYAASR 500
Query: 562 LLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFV 621
++ L+P+ SG Y LL+N Y+ + WDE A+VRK+MK++ V K GFS I+VKGK F
Sbjct: 501 VIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIA 560
Query: 622 GERSHP-QVEEIYGFLQ 637
+ P + +++Y L
Sbjct: 561 FDDKKPLESDDLYKTLD 577
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 140/296 (47%), Gaps = 19/296 (6%)
Query: 108 IFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEA 167
I K + D +++++ GY+ +G D A +FD +++ +WT++I G+ R G EA
Sbjct: 129 IVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEA 188
Query: 168 LQLFDQMSERSVVT-WTTMVSGFAQNGLVDH---ARRFFDLMPEKNTIAW-----TAMVK 218
+ F +M + V T+VS G V+ R L E + +++V
Sbjct: 189 MVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVD 248
Query: 219 SYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVS 274
Y + + K+F EMP RNV +W +I+G + + D+ + +FE M N +
Sbjct: 249 MYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKT 308
Query: 275 WTAMVSGLAQNKMVEVARKYFDIMPFKDM----AAWSAMITAYVDEKLLGEALELFNLVP 330
++++S A + R+ M + A + +I YV L EA+ +F +
Sbjct: 309 LSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLH 368
Query: 331 EKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC--DGMVE 384
EKNV W +I+G+ +G A +A LF ML S P T +++++C G+VE
Sbjct: 369 EKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVE 424
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 124/252 (49%), Gaps = 24/252 (9%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQ- 120
+ + G+ +A+K+FDEMP R+ V++ ++IA Y++++ +F+ M + DV
Sbjct: 247 VDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNE 306
Query: 121 ---SAMVDGYAKAGRLDNAREV----FDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQ 173
S+++ A G L R V N E N + T+LI Y +CG EEA+ +F++
Sbjct: 307 KTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFER 366
Query: 174 MSERSVVTWTTMVSGFAQNGLVDHARRFFDLM-------PEKNTIAWTAMVKSYLDNGQF 226
+ E++V TWT M++GFA +G +AR FDL N + + A++ + G
Sbjct: 367 LHEKNVYTWTAMINGFAAHG---YARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLV 423
Query: 227 SEGYKLFLEMPER-----NVRSWNVMISGCLSANRVDEAIHLFETMP-DRNHVSWTAMVS 280
EG +LFL M R + M+ ++EA L E MP + +V W A+
Sbjct: 424 EEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFG 483
Query: 281 GLAQNKMVEVAR 292
+K E+ +
Sbjct: 484 SCLLHKDYELGK 495
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 141/305 (46%), Gaps = 33/305 (10%)
Query: 67 RRGKLKEARKLFDEMPQRDAVSYNSMIAVYL-----KNKDVHGAETIFKAMSER-----D 116
R G EA F EM ++ V+ N M V + K +DV ++ E D
Sbjct: 181 RNGSASEAMVYFVEM-KKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCD 239
Query: 117 VVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSE 176
V S++VD Y K D+A++VFD M RN +WT+LI+GY + ++ + +F++M +
Sbjct: 240 VFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLK 299
Query: 177 RSVV----TWTTMVSGFAQNGLVDHARRFFDLM----PEKNTIAWTAMVKSYLDNGQFSE 228
V T ++++S A G + RR M E NT A T ++ Y+ G E
Sbjct: 300 SDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEE 359
Query: 229 GYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQ 284
+F + E+NV +W MI+G + +A LF TM N V++ A++S A
Sbjct: 360 AILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAH 419
Query: 285 NKMVEVARKY-------FDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVP-EKNVGI 336
+VE R+ F++ P D ++ M+ + + LL EA L +P E +
Sbjct: 420 GGLVEEGRRLFLSMKGRFNMEPKAD--HYACMVDLFGRKGLLEEAKALIERMPMEPTNVV 477
Query: 337 WNTII 341
W +
Sbjct: 478 WGALF 482
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 117/286 (40%), Gaps = 41/286 (14%)
Query: 387 QAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHG 446
Q HA ++ G + + +V N+LI+ YS SG A +F+ + KDVV+WTAMI + +G
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNG 183
Query: 447 HGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHY 506
A+ F M +G +E+T V +L A V GR V + V
Sbjct: 184 SASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIG 243
Query: 507 SCLVDMLGRAGLVNEAMDVVSTIPPSEI-------------------------------- 534
S LVDM G+ ++A V +P +
Sbjct: 244 SSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVA 303
Query: 535 -DEAVLVALLGACKLHGNIKVANSIGQKLL--SLEPTSSGGYVLLSNAYAAEEQWDEFAQ 591
+E L ++L AC G + + ++ S+E ++ G L+ + Y +E
Sbjct: 304 PNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLI-DLYVKCGCLEEAIL 362
Query: 592 VRKRMKEKNV----KKISGF-SQIQVKGKNHLFFVGERSHPQVEEI 632
V +R+ EKNV I+GF + + LF+ SH E+
Sbjct: 363 VFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEV 408
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 251 bits (642), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 165/572 (28%), Positives = 292/572 (51%), Gaps = 36/572 (6%)
Query: 108 IFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEA 167
+ K+ S +++ + ++D Y K A +VFD+M ERN SW++L+SG+ G + +
Sbjct: 32 LLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGS 91
Query: 168 LQLFDQMSERSV----VTWTTMVSGFA-----QNGLVDHA---RRFFDLMPEKNTIAWTA 215
L LF +M + + T++T + + GL H + F++M E +
Sbjct: 92 LSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVE----VGNS 147
Query: 216 MVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRN---- 271
+V Y G+ +E K+F + +R++ SWN MI+G + A +A+ F M + N
Sbjct: 148 LVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKER 207
Query: 272 --HVSWTAMVSGLAQNKMVEVARKYFDIMPFKDM-AAWSAMITA-----YVDEKLLGEAL 323
+ T+++ + M+ ++ + SA IT YV L A
Sbjct: 208 PDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSAR 267
Query: 324 ELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMV 383
+ F+ + EK + W+++I GY + GE EA+ LF + + ++SII
Sbjct: 268 KAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFA 327
Query: 384 EI-----MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAM 438
+ MQA A+ + G E T V N+++ +Y K G + A F ++ KDV+SWT +
Sbjct: 328 LLRQGKQMQALAVKLPSGLE--TSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVV 385
Query: 439 IVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYN 498
I Y HG G ++++F M+ +PDE+ ++ +LSACSH+G++ +G +F + +
Sbjct: 386 ITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHG 445
Query: 499 LNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSI 558
+ +VEHY+C+VD+LGRAG + EA ++ T+P + + LL C++HG+I++ +
Sbjct: 446 IKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKP-NVGIWQTLLSLCRVHGDIELGKEV 504
Query: 559 GQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHL 618
G+ LL ++ + YV++SN Y W+E R+ K +KK +G S ++++ + H
Sbjct: 505 GKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHF 564
Query: 619 FFVGERSHPQVEEIYGFLQQSLQPLMRETGYT 650
F GE SHP I L+++ + L E GY
Sbjct: 565 FRSGEDSHPLTPVIQETLKEAERRLREELGYV 596
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 167/378 (44%), Gaps = 73/378 (19%)
Query: 74 ARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQ------------- 120
A K+FD MP+R+ VS++++++ ++ N D+ G+ ++F M + +
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL 119
Query: 121 --------------------------SAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSL 154
+++VD Y+K GR++ A +VF + +R+ SW ++
Sbjct: 120 LNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAM 179
Query: 155 ISGYFRCGRTEEALQLFDQMSERSV------VTWTTMVSGFAQNGLVDHARRFFDLM--- 205
I+G+ G +AL F M E ++ T T+++ + G++ ++ +
Sbjct: 180 IAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRS 239
Query: 206 ----PEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAI 261
P TI ++V Y+ G K F ++ E+ + SW+ +I G EA+
Sbjct: 240 GFHCPSSATIT-GSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAM 298
Query: 262 HLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWS-------------A 308
LF+ + + N + + A + ++ V + + K M A + +
Sbjct: 299 GLFKRLQELN-----SQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNS 353
Query: 309 MITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPC 368
++ Y+ L+ EA + F + K+V W +I GY ++G +++R+F MLR P
Sbjct: 354 VVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPD 413
Query: 369 VTTMTSIITSC--DGMVE 384
+++++C GM++
Sbjct: 414 EVCYLAVLSACSHSGMIK 431
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 148/346 (42%), Gaps = 65/346 (18%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYL------KNKDVHGA------- 105
N + + + G++ EA K+F + R +S+N+MIA ++ K D G
Sbjct: 146 NSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIK 205
Query: 106 --------ETIFKAMSERDVV----------------------AQSAMVDGYAKAGRLDN 135
++ KA S ++ ++VD Y K G L +
Sbjct: 206 ERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFS 265
Query: 136 AREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERS----VVTWTTMVSGFAQ 191
AR+ FD + E+ SW+SLI GY + G EA+ LF ++ E + ++++ FA
Sbjct: 266 ARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFAD 325
Query: 192 NGLVDHARRFFDL---MPEK-NTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVM 247
L+ ++ L +P T ++V YL G E K F EM ++V SW V+
Sbjct: 326 FALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVV 385
Query: 248 ISGCLSANRVDEAIHLFETMPDRN----HVSWTAMVSGLAQNKMVEVARKYFD------- 296
I+G +++ +F M N V + A++S + + M++ + F
Sbjct: 386 ITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHG 445
Query: 297 IMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEK-NVGIWNTII 341
I P + ++ ++ L EA L + +P K NVGIW T++
Sbjct: 446 IKP--RVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL 489
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 126/248 (50%), Gaps = 18/248 (7%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAM----SERDVVAQSAMV 124
G L ARK FD++ ++ +S++S+I Y + + A +FK + S+ D A S+++
Sbjct: 261 GYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSII 320
Query: 125 DGYAKAGRLDNAREVFDNMTERNAFSWTSLISG----YFRCGRTEEALQLFDQMSERSVV 180
+A L +++ + + TS+++ Y +CG +EA + F +M + V+
Sbjct: 321 GVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVI 380
Query: 181 TWTTMVSGFAQNGLVDHARRFFDLM----PEKNTIAWTAMVKSYLDNGQFSEGYKLFLEM 236
+WT +++G+ ++GL + R F M E + + + A++ + +G EG +LF ++
Sbjct: 381 SWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKL 440
Query: 237 PERN-----VRSWNVMISGCLSANRVDEAIHLFETMPDRNHVS-WTAMVSGLAQNKMVEV 290
E + V + ++ A R+ EA HL +TMP + +V W ++S + +E+
Sbjct: 441 LETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIEL 500
Query: 291 ARKYFDIM 298
++ I+
Sbjct: 501 GKEVGKIL 508
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Query: 387 QAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHG 446
Q H ++ G N +N LI +Y K + A VF+ + ++VVSW+A++ + +G
Sbjct: 27 QVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNG 86
Query: 447 HGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFD-SIKGAYNLNLKVEH 505
+L +F+ M G P+E TF L AC + +G ++ +K + + VE
Sbjct: 87 DLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGF--EMMVEV 144
Query: 506 YSCLVDMLGRAGLVNEAMDVVSTI 529
+ LVDM + G +NEA V I
Sbjct: 145 GNSLVDMYSKCGRINEAEKVFRRI 168
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 251 bits (642), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 152/517 (29%), Positives = 268/517 (51%), Gaps = 15/517 (2%)
Query: 108 IFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFR-CGRTEE 166
I K + D + +V ++ + +V+ +M + ++ R CG+ E
Sbjct: 60 ILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMEN 119
Query: 167 AL-------QLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKS 219
+ Q V T +V +++ G ++ A++ FD + EKNT++W +++
Sbjct: 120 MVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHG 179
Query: 220 YLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMV 279
YL++G+ E ++F ++PE++ SWN++IS + A LF MP ++ SW ++
Sbjct: 180 YLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILI 239
Query: 280 SGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNT 339
G + +++AR YFD MP K+ +W MI+ Y + A ELF L+ +K+ +++
Sbjct: 240 GGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDA 299
Query: 340 IIDGYVRNGEAGEALRLFILMLR--SCFRPCVTTMTSIITSCDGMVEI---MQAHAMVIH 394
+I Y +NG+ +AL+LF ML S +P T++S++++ + + +
Sbjct: 300 MIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITE 359
Query: 395 LGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQV 454
G + + ++ +LI LY K GD A +F L KD VS++AMI+ +G A +
Sbjct: 360 HGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSL 419
Query: 455 FARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLG 514
F M+ P+ +TF GLLSA SH+GLV +G + F+S+K +NL +HY +VDMLG
Sbjct: 420 FTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPSADHYGIMVDMLG 478
Query: 515 RAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYV 574
RAG + EA +++ ++ P + + V ALL A LH N++ + LE +G
Sbjct: 479 RAGRLEEAYELIKSM-PMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLS 537
Query: 575 LLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQ 611
L+ Y++ +WD+ VR +KEK + K G S ++
Sbjct: 538 HLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/446 (26%), Positives = 212/446 (47%), Gaps = 44/446 (9%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQS 121
+ + R G ++ A+K FD++ +++ VS+NS++ YL++ ++ A +F + E+D V+ +
Sbjct: 146 VGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWN 205
Query: 122 AMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVT 181
++ YAK G + NA +F M ++ SW LI GY C + A FD M +++ V+
Sbjct: 206 LIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVS 265
Query: 182 WTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERN- 240
W TM+SG+ + G V A F LM +K+ + + AM+ Y NG+ + KLF +M ERN
Sbjct: 266 WITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNS 325
Query: 241 -VRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMP 299
++ + +S +SAN + + + +W ++ + E K D++
Sbjct: 326 YIQPDEITLSSVVSAN---------SQLGNTSFGTWV-------ESYITEHGIKIDDLLS 369
Query: 300 FKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFIL 359
+++I Y+ +A ++F+ + +K+ ++ +I G NG A EA LF
Sbjct: 370 -------TSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTA 422
Query: 360 MLRSCFRPCVTTMTSIIT--SCDGMV-EIMQAHAMVIHLGFEQNTWVTNALITLYSKSGD 416
M+ P V T T +++ S G+V E + + E + ++ + ++G
Sbjct: 423 MIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGR 482
Query: 417 LCSAMLVFELLKS----KDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVG 472
L A +EL+KS + W A+++A G H F + S E G
Sbjct: 483 LEEA---YELIKSMPMQPNAGVWGALLLA-----SGLHNNVEFGEIACSHCVKLETDPTG 534
Query: 473 LLSAC----SHAGLVNQGRRVFDSIK 494
LS S G + R V DSIK
Sbjct: 535 YLSHLAMIYSSVGRWDDARTVRDSIK 560
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 150/483 (31%), Positives = 265/483 (54%), Gaps = 18/483 (3%)
Query: 186 VSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWN 245
+S +++ G A + M +KN ++ ++ Y+ G K+F EMP+R + +WN
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 246 VMISGCLSANRVDEAIHLFETM------PDRNHVSWTAMVSGLAQNKMVEVARKYFD-IM 298
MI+G + +E + LF M PD + ++ SG A + V + ++ +
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDE--YTLGSVFSGSAGLRSVSIGQQIHGYTI 118
Query: 299 PFK---DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALR 355
+ D+ S++ Y+ L + + +P +N+ WNT+I G +NG L
Sbjct: 119 KYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLY 178
Query: 356 LFILMLRSCFRPCVTTMTSIITSCDGMV---EIMQAHAMVIHLGFEQNTWVTNALITLYS 412
L+ +M S RP T ++++SC + + Q HA I +G V ++LI++YS
Sbjct: 179 LYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYS 238
Query: 413 KSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMV-TSGTKPDEITFV 471
K G L A F + +D V W++MI AY HG G A+++F M + + +E+ F+
Sbjct: 239 KCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFL 298
Query: 472 GLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPP 531
LL ACSH+GL ++G +FD + Y ++HY+C+VD+LGRAG +++A ++ ++P
Sbjct: 299 NLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPI 358
Query: 532 SEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQ 591
+ D + LL AC +H N ++A + +++L ++P S YVLL+N +A+ ++W + ++
Sbjct: 359 -KTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSE 417
Query: 592 VRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTP 651
VRK M++KNVKK +G S + KG+ H F +G+RS + +EIY +L++ L M+ GY P
Sbjct: 418 VRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKE-LTLEMKLKGYKP 476
Query: 652 ENS 654
+ +
Sbjct: 477 DTA 479
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 181/391 (46%), Gaps = 26/391 (6%)
Query: 93 IAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWT 152
+++Y K D A ++ M +++ ++ + +++GY +AG L NAR+VFD M +R +W
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 153 SLISGYFRCGRTEEALQLFDQMS----ERSVVTWTTMVSGFAQNGLVDHARRFFDLMP-- 206
++I+G + EE L LF +M T ++ SG A V ++
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 207 --EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLF 264
E + + +++ Y+ NG+ +G + MP RN+ +WN +I G + ++L+
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 265 ETMP----DRNHVSWTAMVSGLA----QNKMVEVARKYFDIMPFKDMAAWSAMITAYVDE 316
+ M N +++ ++S + + + ++ + I +A S++I+ Y
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC 240
Query: 317 KLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILML-RSCFRPCVTTMTSI 375
LG+A + F+ +++ +W+++I Y +G+ EA+ LF M ++ ++
Sbjct: 241 GCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNL 300
Query: 376 ITSC------DGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKS 429
+ +C D +E+ MV GF+ ++ L ++G L A + +
Sbjct: 301 LYACSHSGLKDKGLELFD--MMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPI 358
Query: 430 K-DVVSWTAMIVAYANHGHGHHALQVFARMV 459
K D+V W ++ A H + A +VF ++
Sbjct: 359 KTDIVIWKTLLSACNIHKNAEMAQRVFKEIL 389
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 149/373 (39%), Gaps = 100/373 (26%)
Query: 36 IFRFLRNFTASISISHDWSLRKRNV---EITILG--RRGKLKEARKLFDEMPQRDAVSYN 90
++ L +F +++++ +RK+N I I G R G L ARK+FDEMP R ++N
Sbjct: 3 MYSKLGDFPSAVAVYG--RMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 91 SMIAVYLKNKDVHGAETIFKAMS------------------------------------- 113
+MIA ++ + ++F+ M
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 114 --ERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLF 171
E D+V S++ Y + G+L + V +M RN +W +LI G + G E L L+
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 172 DQMS----ERSVVTWTT-----------------------------------MVSGFAQN 192
M + +T+ T ++S +++
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC 240
Query: 193 GLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPER-----NVRSWNVM 247
G + A + F +++ + W++M+ +Y +GQ E +LF M E+ N ++ +
Sbjct: 241 GCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNL 300
Query: 248 ISGCLSANRVDEAIHLFETM-------PDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPF 300
+ C + D+ + LF+ M P H +T +V L + ++ A MP
Sbjct: 301 LYACSHSGLKDKGLELFDMMVEKYGFKPGLKH--YTCVVDLLGRAGCLDQAEAIIRSMPI 358
Query: 301 K-DMAAWSAMITA 312
K D+ W +++A
Sbjct: 359 KTDIVIWKTLLSA 371
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 164/525 (31%), Positives = 265/525 (50%), Gaps = 43/525 (8%)
Query: 100 KDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYF 159
K +H + + MS VV + + G L A ++FD + + + ++ G
Sbjct: 29 KQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSA 88
Query: 160 RCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKS 219
+ + E+ + L+ +M +R V P++ T + S
Sbjct: 89 QSMKPEKTVSLYTEMEKRGVS-------------------------PDRYTFTFVLKACS 123
Query: 220 YLD---NGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWT 276
L+ NG F+ K+ N N +I + + A LF+ + V+W+
Sbjct: 124 KLEWRSNG-FAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWS 182
Query: 277 AMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGI 336
+M SG A+ ++ A + FD MP+KD AW+ MIT + K + A ELF+ EK+V
Sbjct: 183 SMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVT 242
Query: 337 WNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHL- 395
WN +I GYV G EAL +F M + P V T+ S++++C + ++ + I++
Sbjct: 243 WNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYIL 302
Query: 396 -------GFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHG 448
T + NALI +Y+K G + A+ VF +K +D+ +W +IV A H H
Sbjct: 303 ETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HA 361
Query: 449 HHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSC 508
++++F M P+E+TF+G++ ACSH+G V++GR+ F ++ YN+ ++HY C
Sbjct: 362 EGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGC 421
Query: 509 LVDMLGRAGLVNEAMDVVST--IPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLE 566
+VDMLGRAG + EA V + I P+ I V LLGACK++GN+++ +KLLS+
Sbjct: 422 MVDMLGRAGQLEEAFMFVESMKIEPNAI---VWRTLLGACKIYGNVELGKYANEKLLSMR 478
Query: 567 PTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQ 611
SG YVLLSN YA+ QWD +VRK + VKK +G S I+
Sbjct: 479 KDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/501 (23%), Positives = 218/501 (43%), Gaps = 35/501 (6%)
Query: 26 RRRVFSQCQPIFRFLRNFTASISIS---HDWSLRKRNVEITILGRRGKLKEARKLFDEMP 82
R +++ C+ I R L+ AS+ ++ + S+ + L G LK A KLFDE+P
Sbjct: 15 RPKLWQNCKNI-RTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIP 73
Query: 83 QRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNARE---V 139
+ D N ++ ++ +++ M +R V KA R
Sbjct: 74 KPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFA 133
Query: 140 FDNMTERNAFSWT-----SLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGL 194
F R+ F +LI + CG A +LFD ++ V W++M SG+A+ G
Sbjct: 134 FHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGK 193
Query: 195 VDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSA 254
+D A R FD MP K+ +AW M+ L + +LF E++V +WN MISG ++
Sbjct: 194 IDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNC 253
Query: 255 NRVDEAIHLFETMPDRNH----VSWTAMVSGLAQNKMVEVARK-YFDIMPFKDMAA---- 305
EA+ +F+ M D V+ +++S A +E ++ + I+ +++
Sbjct: 254 GYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYV 313
Query: 306 ----WSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILML 361
W+A+I Y + A+E+F V ++++ WNT+I G + G ++ +F M
Sbjct: 314 GTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHAEG-SIEMFEEMQ 372
Query: 362 RSCFRPCVTTMTSIITSC--DGMVEIMQAHAMVIH--LGFEQNTWVTNALITLYSKSGDL 417
R P T +I +C G V+ + + ++ E N ++ + ++G L
Sbjct: 373 RLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQL 432
Query: 418 CSAMLVFELLK-SKDVVSWTAMIVA---YANHGHGHHALQVFARMVTSGTKPDEITFVGL 473
A + E +K + + W ++ A Y N G +A + M D + +
Sbjct: 433 EEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSM-RKDESGDYVLLSNI 491
Query: 474 LSACSHAGLVNQGRRVFDSIK 494
++ V + R++FD +
Sbjct: 492 YASTGQWDGVQKVRKMFDDTR 512
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 251 bits (640), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/420 (33%), Positives = 230/420 (54%), Gaps = 6/420 (1%)
Query: 224 GQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLA 283
G + K+F EM E+NV W MI+G L + A F+ P+R+ V W M+SG
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYI 101
Query: 284 QNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDG 343
+ + AR FD MP +D+ +W+ ++ Y + + +F+ +PE+NV WN +I G
Sbjct: 102 EMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKG 161
Query: 344 YVRNGEAGEALRLFILML-RSCFRPCVTTMTSIITSCD--GMVEIMQ-AHAMVIHLGFEQ 399
Y +NG E L F M+ P TMT ++++C G + + H LG+ +
Sbjct: 162 YAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNK 221
Query: 400 -NTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARM 458
+ V NALI +Y K G + AM VF+ +K +D++SW MI A HGHG AL +F M
Sbjct: 222 VDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEM 281
Query: 459 VTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGL 518
SG PD++TFVG+L AC H GLV G F+S+ +++ ++EH C+VD+L RAG
Sbjct: 282 KNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGF 341
Query: 519 VNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSN 578
+ +A++ ++ + P + D + LLGA K++ + + ++L+ LEP + +V+LSN
Sbjct: 342 LTQAVEFINKM-PVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSN 400
Query: 579 AYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQ 638
Y ++D+ A+++ M++ KK +G S I+ F+ HP+ EE+ L++
Sbjct: 401 IYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRILRE 460
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 144/328 (43%), Gaps = 59/328 (17%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYA 128
G + A K+F EM +++ V + SMI YL NKD+ A F ERD+V + M+ GY
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYI 101
Query: 129 KAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSG 188
+ G + AR +FD M R+ SW +++ GY G E ++FD M ER+V +W ++ G
Sbjct: 102 EMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKG 161
Query: 189 FAQNGLVDHARRFFDLMPEKNTIA-----------------------WT----------- 214
+AQNG V F M ++ ++ W
Sbjct: 162 YAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNK 221
Query: 215 -------AMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM 267
A++ Y G ++F + R++ SWN MI+G + EA++LF M
Sbjct: 222 VDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEM 281
Query: 268 ------PDRNHVSWTAMVSGLAQNKMVEVARKYFD-------IMPFKDMAAWSAMITAYV 314
PD+ V++ ++ +VE YF+ IMP ++ ++
Sbjct: 282 KNSGISPDK--VTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMP--EIEHCGCVVDLLS 337
Query: 315 DEKLLGEALELFNLVPEK-NVGIWNTII 341
L +A+E N +P K + IW T++
Sbjct: 338 RAGFLTQAVEFINKMPVKADAVIWATLL 365
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/445 (33%), Positives = 245/445 (55%), Gaps = 16/445 (3%)
Query: 208 KNTIAWTAMVKSYLDNGQFSEGYKLFLEMP----ERNVRSWNVMISGCLSANRVDEAI-- 261
+ T++WT+ + NG+ +E K F +M E N ++ ++SGC EA+
Sbjct: 34 ETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGD 93
Query: 262 ----HLFETMPDRNHV-SWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDE 316
+ + DRNHV TA++ ++ + AR FD M K+ W+ MI Y+
Sbjct: 94 LLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRS 153
Query: 317 KLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSII 376
+ A ++F+ +PE+++ W +I+G+V+ G EAL F M S +P + + +
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAAL 213
Query: 377 TSCDGMVEI---MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVV 433
+C + + + H V+ F+ N V+N+LI LY + G + A VF ++ + VV
Sbjct: 214 NACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVV 273
Query: 434 SWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSI 493
SW ++IV +A +G+ H +L F +M G KPD +TF G L+ACSH GLV +G R F +
Sbjct: 274 SWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIM 333
Query: 494 KGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHG-NI 552
K Y ++ ++EHY CLVD+ RAG + +A+ +V ++ P + +E V+ +LL AC HG NI
Sbjct: 334 KCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSM-PMKPNEVVIGSLLAACSNHGNNI 392
Query: 553 KVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQV 612
+A + + L L S YV+LSN YAA+ +W+ +++R++MK +KK GFS I++
Sbjct: 393 VLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEI 452
Query: 613 KGKNHLFFVGERSHPQVEEIYGFLQ 637
H+F G+ +H + I L+
Sbjct: 453 DDCMHVFMAGDNAHVETTYIREVLE 477
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 160/346 (46%), Gaps = 31/346 (8%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDA-VSYNSMIAVYLKNKD-VHGAETIFK--------- 110
I +L R G+L EA K F +M ++ + IA+ D G+E +
Sbjct: 43 INLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKL 102
Query: 111 AMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQL 170
+ V+ +A++ Y+K GR AR VFD M ++N+ +W ++I GY R G+ + A ++
Sbjct: 103 GLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKM 162
Query: 171 FDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMP----EKNTIAWTAMVKSYLDNGQF 226
FD+M ER +++WT M++GF + G + A +F M + + +A A + + + G
Sbjct: 163 FDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGAL 222
Query: 227 SEG---YKLFLEMP-ERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGL 282
S G ++ L + NVR N +I V+ A +F M R VSW +++ G
Sbjct: 223 SFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGF 282
Query: 283 AQNKMVEVARKYFDIMPFK----DMAAWSAMITAYVDEKLLGEALELFNLVP-----EKN 333
A N + YF M K D ++ +TA L+ E L F ++
Sbjct: 283 AANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPR 342
Query: 334 VGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC 379
+ + ++D Y R G +AL+L M +P + S++ +C
Sbjct: 343 IEHYGCLVDLYSRAGRLEDALKLVQSMP---MKPNEVVIGSLLAAC 385
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/485 (30%), Positives = 255/485 (52%), Gaps = 30/485 (6%)
Query: 195 VDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSE--GYKLFLEM-----PERNVRSWNVM 247
+D+A + F+ MP++N +W +++ + ++ + LF EM E N ++ +
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 248 ISGCLSANRVDEA--IHLF--------ETMPDRNHVSWTAMVSGLAQNKMV---EVARKY 294
+ C ++ E IH + N V M + +++ + K
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 295 FDIMPFK-----DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGE 349
+M + ++ W+ MI Y+ A LF+ + +++V WNT+I GY NG
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 254
Query: 350 AGEALRLFILMLRSCFRPCVTTMTSIITSCD--GMVEIMQ-AHAMVIHLGFEQNTWVTNA 406
+A+ +F M + RP T+ S++ + G +E+ + H G + + +A
Sbjct: 255 FKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSA 314
Query: 407 LITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPD 466
LI +YSK G + A+ VFE L ++V++W+AMI +A HG A+ F +M +G +P
Sbjct: 315 LIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPS 374
Query: 467 EITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVV 526
++ ++ LL+ACSH GLV +GRR F + L ++EHY C+VD+LGR+GL++EA + +
Sbjct: 375 DVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFI 434
Query: 527 STIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQW 586
+P D+ + ALLGAC++ GN+++ + L+ + P SG YV LSN YA++ W
Sbjct: 435 LNMPIKP-DDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNW 493
Query: 587 DEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRE 646
E +++R RMKEK+++K G S I + G H F V + SHP+ +EI L + + +R
Sbjct: 494 SEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVE-ISDKLRL 552
Query: 647 TGYTP 651
GY P
Sbjct: 553 AGYRP 557
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/456 (22%), Positives = 194/456 (42%), Gaps = 102/456 (22%)
Query: 71 LKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHG--AETIFKAMSERDVVAQS-----AM 123
L A K+F++MPQR+ S+N++I + ++ + A T+F M + V + ++
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 124 VDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQLFDQ------ 173
+ AK G++ +++ + + F ++L+ Y CG ++A LF +
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 174 ---MSER-----SVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQ 225
M++R +V W M+ G+ + G AR FD M +++ ++W M+ Y NG
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 254
Query: 226 FSEGYKLFLEMPERNVRSWNVMISGCLSAN------RVDEAIHLF--ETMPDRNHVSWTA 277
F + ++F EM + ++R V + L A + E +HL+ ++ + V +A
Sbjct: 255 FKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSA 314
Query: 278 MVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIW 337
++ ++ ++E A F+ +P +++ WSAM
Sbjct: 315 LIDMYSKCGIIEKAIHVFERLPRENVITWSAM---------------------------- 346
Query: 338 NTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCD--GMVEIMQAH--AMVI 393
I+G+ +G+AG+A+ F M ++ RP +++T+C G+VE + + MV
Sbjct: 347 ---INGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVS 403
Query: 394 HLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQ 453
G E ++ L +SG L A +
Sbjct: 404 VDGLEPRIEHYGCMVDLLGRSGLLDEA--------------------------------E 431
Query: 454 VFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRV 489
F ++ KPD++ + LL AC G V G+RV
Sbjct: 432 EF--ILNMPIKPDDVIWKALLGACRMQGNVEMGKRV 465
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 142/308 (46%), Gaps = 30/308 (9%)
Query: 56 RKRNVEITILG-------RRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETI 108
RKR+ EI + R G K AR LFD+M QR VS+N+MI+ Y N A +
Sbjct: 202 RKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEV 261
Query: 109 FKAMSERDV----VAQSAMVDGYAKAGRLDNAREVF----DNMTERNAFSWTSLISGYFR 160
F+ M + D+ V +++ ++ G L+ + D+ + ++LI Y +
Sbjct: 262 FREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSK 321
Query: 161 CGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPE----KNTIAWTAM 216
CG E+A+ +F+++ +V+TW+ M++GFA +G A F M + + +A+ +
Sbjct: 322 CGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINL 381
Query: 217 VKSYLDNGQFSEGYKLFLEMP-----ERNVRSWNVMISGCLSANRVDEAIHLFETMPDR- 270
+ + G EG + F +M E + + M+ + +DEA MP +
Sbjct: 382 LTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKP 441
Query: 271 NHVSWTAMVSGLAQNKMVEVARK----YFDIMPFKDMAAWSAMITAYVDEKLLGEALELF 326
+ V W A++ VE+ ++ D++P D A+ A+ Y + E E+
Sbjct: 442 DDVIWKALLGACRMQGNVEMGKRVANILMDMVP-HDSGAYVALSNMYASQGNWSEVSEMR 500
Query: 327 NLVPEKNV 334
+ EK++
Sbjct: 501 LRMKEKDI 508
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 124/293 (42%), Gaps = 58/293 (19%)
Query: 311 TAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGE--AGEALRLFILMLRSCF-RP 367
T+ + + L A ++FN +P++N WNTII G+ + E A A+ LF M+ F P
Sbjct: 67 TSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEP 126
Query: 368 CVTTMTSIITSCDGMVEIM---QAHAMVIHLGFEQNTWVT-------------------- 404
T S++ +C +I Q H + + GF + +V
Sbjct: 127 NRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLF 186
Query: 405 -------------------------NALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMI 439
N +I Y + GD +A ++F+ ++ + VVSW MI
Sbjct: 187 YKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMI 246
Query: 440 VAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNL 499
Y+ +G A++VF M +P+ +T V +L A S G + G + A +
Sbjct: 247 SGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLH---LYAEDS 303
Query: 500 NLKVEHY--SCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHG 550
++++ S L+DM + G++ +A+ V +P + A++ +HG
Sbjct: 304 GIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENV--ITWSAMINGFAIHG 354
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 159/569 (27%), Positives = 293/569 (51%), Gaps = 39/569 (6%)
Query: 76 KLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSER----DVVAQSAMVDGYAKAG 131
++F+ + Q + VSY ++I + V A +F+ M E+ D V S ++ A
Sbjct: 195 RVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPRE 254
Query: 132 RLDNAREVFDN--------MTERNAFSW-----TSLISGYFRCGRTEEALQLFDQMSERS 178
D+ E++ N + R F SL+ Y + A +F +M E +
Sbjct: 255 GCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVN 314
Query: 179 VVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFSEGYKLFL 234
VV+W M+ GF Q D + F M + N + +++ + +G G ++F
Sbjct: 315 VVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFS 374
Query: 235 EMPERNVRSWNVMISGCLSANRVDEAIHLFETM------PDRNHVSWTAMVSGLAQNKMV 288
+P+ +V +WN M+SG + +EAI F M PD+ +S ++S A+ + +
Sbjct: 375 SIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLS--VILSSCARLRFL 432
Query: 289 EVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELF-----NLVPEKNVGIWNTIIDG 343
E ++ ++ +++ S +++ + E +E+ + + E ++ WN++I G
Sbjct: 433 EGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISG 492
Query: 344 YVRNGEAGEALRLFILMLRSC-FRPCVTTMTSIITSCDGMVEIM---QAHAMVIHLGFEQ 399
+ N +AL LF M ++ P T+ ++++SC + ++ Q H +V+ G+
Sbjct: 493 FRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVS 552
Query: 400 NTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMV 459
+++V AL +Y K G++ SA F+ + K+ V W MI Y ++G G A+ ++ +M+
Sbjct: 553 DSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMI 612
Query: 460 TSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLV 519
+SG KPD ITFV +L+ACSH+GLV G + S++ + + +++HY C+VD LGRAG +
Sbjct: 613 SSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRL 672
Query: 520 NEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNA 579
+A + ++ P + + LL +C++HG++ +A + +KL+ L+P SS YVLLSN
Sbjct: 673 EDA-EKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNT 731
Query: 580 YAAEEQWDEFAQVRKRMKEKNVKKISGFS 608
Y++ QWD+ A ++ M + V K G S
Sbjct: 732 YSSLRQWDDSAALQGLMNKNRVHKTPGQS 760
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 141/614 (22%), Positives = 251/614 (40%), Gaps = 146/614 (23%)
Query: 7 YLAFVLKTLVMKMGVCYHHRRRVFSQCQPIFRFLRNFTASISISHDWSLRKRNVEITILG 66
YLA +L+ CY R C+ + + F + + D L R +++ I
Sbjct: 8 YLASLLR--------CYRDER-----CKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYI-- 52
Query: 67 RRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDG 126
G ARK+FDEM RD S+N+ + K D+ A +F M ERDVV+ + M+
Sbjct: 53 ECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISV 112
Query: 127 YAKAGRLDNAREVFDNMT---------------------------------------ERN 147
+ G + A V+ M ++N
Sbjct: 113 LVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKN 172
Query: 148 AFSWTSLISGYFRCGR-TEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMP 206
F +L+S Y +CG + +++F+ +S+ + V++T ++ G A+ V A + F LM
Sbjct: 173 IFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMC 232
Query: 207 EK----------NTIAWTA--------------------------------------MVK 218
EK N ++ +A +++
Sbjct: 233 EKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLE 292
Query: 219 SYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVS 274
Y N + +F EMPE NV SWN+MI G R D+++ M D N V+
Sbjct: 293 IYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVT 352
Query: 275 WTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNV 334
+++ ++ VE R+ F +P ++AW+AM++ Y + + EA+ F + +N+
Sbjct: 353 CISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNL 412
Query: 335 GIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI---MQAHAM 391
+P TT++ I++SC + + Q H +
Sbjct: 413 -------------------------------KPDKTTLSVILSSCARLRFLEGGKQIHGV 441
Query: 392 VIHLGFEQNTWVTNALITLYSKSGDLCSAMLVF-ELLKSKDVVSWTAMIVAYANHGHGHH 450
VI +N+ + + LI +YS+ + + +F + + D+ W +MI + ++
Sbjct: 442 VIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTK 501
Query: 451 ALQVFARM-VTSGTKPDEITFVGLLSACSHAGLVNQGRRVFD-SIKGAYNLNLKVEHYSC 508
AL +F RM T+ P+E +F +LS+CS + GR+ +K Y + VE +
Sbjct: 502 ALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVE--TA 559
Query: 509 LVDMLGRAGLVNEA 522
L DM + G ++ A
Sbjct: 560 LTDMYCKCGEIDSA 573
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 150/464 (32%), Positives = 264/464 (56%), Gaps = 36/464 (7%)
Query: 70 KLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSER-----DVVAQSAMV 124
+L E R MP DA S+ V +K+ G +F+A+ E+ D ++ ++
Sbjct: 92 RLYEQRSRCGIMP--DAFSF----PVVIKSAGRFG--ILFQALVEKLGFFKDPYVRNVIM 143
Query: 125 DGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTT 184
D Y K +++AR+VFD +++R W +ISGY++ G EEA +LFD M E VV+WT
Sbjct: 144 DMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTV 203
Query: 185 MVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVR-- 242
M++GFA+ +++AR++FD MPEK+ ++W AM+ Y NG + +LF +M VR
Sbjct: 204 MITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPN 263
Query: 243 --SWNVMISGCLSANRVDEAI--HLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKY 294
+W ++IS C + R D ++ L + + ++ N TA++ A+ + ++ AR+
Sbjct: 264 ETTWVIVISAC--SFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRI 321
Query: 295 F-DIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEA 353
F ++ +++ W+AMI+ Y + A +LF+ +P++NV WN++I GY NG+A A
Sbjct: 322 FNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALA 381
Query: 354 LRLFILMLR-SCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQ---NTWVTNALIT 409
+ F M+ +P TM S++++C M ++ +V ++ Q N +LI
Sbjct: 382 IEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIF 441
Query: 410 LYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEIT 469
+Y++ G+L A VF+ +K +DVVS+ + A+A +G G L + ++M G +PD +T
Sbjct: 442 MYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVT 501
Query: 470 FVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDML 513
+ +L+AC+ AGL+ +G+R+F SI+ N +HY+C+ D+L
Sbjct: 502 YTSVLTACNRAGLLKEGQRIFKSIR-----NPLADHYACM-DLL 539
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 197/411 (47%), Gaps = 19/411 (4%)
Query: 137 REVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVD 196
R +FD++T N F S+ + + + L+L++Q S + M F+ ++
Sbjct: 60 RLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGI-----MPDAFSFPVVIK 114
Query: 197 HARRF---FDLMPE-----KNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMI 248
A RF F + E K+ ++ Y+ + K+F ++ +R WNVMI
Sbjct: 115 SAGRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMI 174
Query: 249 SGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSA 308
SG +EA LF+ MP+ + VSWT M++G A+ K +E ARKYFD MP K + +W+A
Sbjct: 175 SGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNA 234
Query: 309 MITAYVDEKLLGEALELFN----LVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSC 364
M++ Y +AL LFN L N W +I + L L+
Sbjct: 235 MLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKR 294
Query: 365 FRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVF 424
R T+++ +I A + LG ++N NA+I+ Y++ GD+ SA +F
Sbjct: 295 VRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLF 354
Query: 425 ELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSG-TKPDEITFVGLLSACSHAGLV 483
+ + ++VVSW ++I YA++G A++ F M+ G +KPDE+T + +LSAC H +
Sbjct: 355 DTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADL 414
Query: 484 NQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEI 534
G + D I+ + L Y L+ M R G + EA V + ++
Sbjct: 415 ELGDCIVDYIRKN-QIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDV 464
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 177/372 (47%), Gaps = 49/372 (13%)
Query: 58 RNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDV 117
RNV + + + ++ ARK+FD++ QR +N MI+ Y K + A +F M E DV
Sbjct: 139 RNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDV 198
Query: 118 VAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSER 177
V+ + M+ G+AK L+NAR+ FD M E++ SW +++SGY + G TE+AL+LF+ M
Sbjct: 199 VSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRL 258
Query: 178 SV----VTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFSEG 229
V TW ++S + R L+ EK N TA++ +
Sbjct: 259 GVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSA 318
Query: 230 YKLFLEM-PERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMV 288
++F E+ +RN+ +WN MISG + A LF+TMP RN VSW ++++G A N
Sbjct: 319 RRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQA 378
Query: 289 EVARKYF-DIMPFKDM---------------------------------------AAWSA 308
+A ++F D++ + D + + +
Sbjct: 379 ALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRS 438
Query: 309 MITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPC 368
+I Y L EA +F+ + E++V +NT+ + NG+ E L L M P
Sbjct: 439 LIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPD 498
Query: 369 VTTMTSIITSCD 380
T TS++T+C+
Sbjct: 499 RVTYTSVLTACN 510
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 144/368 (39%), Gaps = 102/368 (27%)
Query: 300 FKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFIL 359
FKD + ++ YV + + A ++F+ + ++ WN +I GY + G EA +LF
Sbjct: 133 FKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLF-- 190
Query: 360 MLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCS 419
++M + +V +W +IT ++K DL +
Sbjct: 191 ------------------------DMMPENDVV--------SWTV--MITGFAKVKDLEN 216
Query: 420 AMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACS- 478
A F+ + K VVSW AM+ YA +G AL++F M+ G +P+E T+V ++SACS
Sbjct: 217 ARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSF 276
Query: 479 --------------------------------HAGL--VNQGRRVFDSIKGAYNL---NL 501
HA + RR+F+ + NL N
Sbjct: 277 RADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNA 336
Query: 502 KVEHYSCLVDML---------------------------GRAGLVNEAMDVVSTIPPSEI 534
+ Y+ + DM G+A L E + + S+
Sbjct: 337 MISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKP 396
Query: 535 DEAVLVALLGACKLHGNIKVANSIGQKLLSLE-PTSSGGYVLLSNAYAAEEQWDEFAQVR 593
DE ++++L AC ++++ + I + + + GY L YA E +V
Sbjct: 397 DEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVF 456
Query: 594 KRMKEKNV 601
MKE++V
Sbjct: 457 DEMKERDV 464
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 169/553 (30%), Positives = 273/553 (49%), Gaps = 58/553 (10%)
Query: 102 VHGAETIFKAMSERDVVAQSAMVD---GYAKAGRLDNAREVFDNMTERNAFSWTSLISGY 158
+HG + K+ R+V+ S ++D + L AR VF+++ + + W S+I GY
Sbjct: 25 LHG--LMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGY 82
Query: 159 FRCGRTEEALQLFDQMSERSV-------------------VTWTTMVSGFA-QNGLVDHA 198
++AL + +M + + + + V GF + G
Sbjct: 83 SNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGF---- 138
Query: 199 RRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVD 258
E N T ++ Y+ G+ + G ++F ++P+ NV +W +ISG ++ NR
Sbjct: 139 --------EVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFS 190
Query: 259 EAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVAR------------KYFDIMPFKD 302
+AI F M N ++ + K + + YF +
Sbjct: 191 DAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFN 250
Query: 303 MAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLR 362
+ +++I Y L A LF+ +PE+ + WN+II GY +NG+A EAL +F+ ML
Sbjct: 251 VILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLD 310
Query: 363 SCFRPCVTTMTSIITSC--DGMVEIMQA-HAMVIHLGFEQNTWVTNALITLYSKSGDLCS 419
P T S+I + G ++ Q+ HA V GF ++ + AL+ +Y+K+GD S
Sbjct: 311 LGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAES 370
Query: 420 AMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSG-TKPDEITFVGLLSACS 478
A FE L+ KD ++WT +I+ A+HGHG+ AL +F RM G PD IT++G+L ACS
Sbjct: 371 AKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACS 430
Query: 479 HAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAV 538
H GLV +G+R F ++ + L VEHY C+VD+L RAG EA +V T+P + +
Sbjct: 431 HIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKP-NVNI 489
Query: 539 LVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKE 598
ALL C +H N+++ + I + E SG YVLLSN YA +W + +R+ MK
Sbjct: 490 WGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKS 549
Query: 599 KNVKKISGFSQIQ 611
K V K+ G S ++
Sbjct: 550 KRVDKVLGHSSVE 562
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 123/252 (48%), Gaps = 21/252 (8%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDV---- 117
I + + G L+ AR LFD MP+R VS+NS+I Y +N D A +F M + +
Sbjct: 258 IDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDK 317
Query: 118 -----VAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFD 172
V +++M+ G ++ G+ +A V ++A +L++ Y + G E A + F+
Sbjct: 318 VTFLSVIRASMIQGCSQLGQSIHAY-VSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFE 376
Query: 173 QMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEK-----NTIAWTAMVKSYLDNGQFS 227
+ ++ + WT ++ G A +G + A F M EK + I + ++ + G
Sbjct: 377 DLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVE 436
Query: 228 EGYKLFLEMP-----ERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVS-WTAMVSG 281
EG + F EM E V + M+ A R +EA L +TMP + +V+ W A+++G
Sbjct: 437 EGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNG 496
Query: 282 LAQNKMVEVARK 293
++ +E+ +
Sbjct: 497 CDIHENLELTDR 508
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 135/351 (38%), Gaps = 101/351 (28%)
Query: 92 MIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTER----- 146
++ +Y+ +V+ +F+ + + +VVA +++ G+ R +A E F M
Sbjct: 148 LLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKAN 207
Query: 147 ------------------------------------------NAFSWTSLISGYFRCGRT 164
N TSLI Y +CG
Sbjct: 208 ETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDL 267
Query: 165 EEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHAR-RFFDLM-----PEKNT-------- 210
A LFD M ER++V+W ++++G++QNG + A F D++ P+K T
Sbjct: 268 RTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRAS 327
Query: 211 ---------------IAWTAMVKS----------YLDNGQFSEGYKLFLEMPERNVRSWN 245
++ T VK Y G K F ++ +++ +W
Sbjct: 328 MIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWT 387
Query: 246 VMISGCLSANRVDEAIHLFETMPDRNH-----VSWTAMVSGLAQNKMVEVARKYFDIMPF 300
V+I G S +EA+ +F+ M ++ + +++ ++ + +VE ++YF M
Sbjct: 388 VVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEM-- 445
Query: 301 KDMAA-------WSAMITAYVDEKLLGEALELFNLVPEK-NVGIWNTIIDG 343
+D+ + M+ EA L +P K NV IW +++G
Sbjct: 446 RDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNG 496
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 10/175 (5%)
Query: 360 MLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALI---TLYSKSGD 416
M++ ++P + S + +C +VE+ Q H ++I +N + LI T ++ +
Sbjct: 1 MMKKHYKP----ILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMN 56
Query: 417 LCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSA 476
L A VFE + V W +MI Y+N + AL + M+ G PD TF +L A
Sbjct: 57 LSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKA 116
Query: 477 CSHAGLVNQGRRVFD-SIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIP 530
CS + G V +K + +N+ V +CL+ M G VN + V IP
Sbjct: 117 CSGLRDIQFGSCVHGFVVKTGFEVNMYVS--TCLLHMYMCCGEVNYGLRVFEDIP 169
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 249 bits (635), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 202/666 (30%), Positives = 318/666 (47%), Gaps = 58/666 (8%)
Query: 29 VFSQCQPIFRFLRNFTASISISHDWSLRKRNVE-ITILGRRGKLKEARKLFDEMP--QRD 85
+ S Q F LR F +S+ S +L++ VE + L R G ++ A LF P +
Sbjct: 2 ITSLSQISFGTLRRFGSSVLPS---ALKREFVEGLRTLVRSGDIRRAVSLFYSAPVELQS 58
Query: 86 AVSYNSMIAVYLKNKDVHGAETIFKAM------SERDVVAQSAMVDGYAKAGRLDNAREV 139
+Y ++ + +++ + M ++V+ + +++ YAK G + AR+V
Sbjct: 59 QQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQV 118
Query: 140 FDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQM---------SERSVVTWTTMVSGFA 190
FD M ERN SWT+LI+GY + G +E LF M + SV+T G
Sbjct: 119 FDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFPNEFTLSSVLTSCRYEPGKQ 178
Query: 191 QNGLVDHARRFFDLMPEKNTIAWTAMVKSY---LDNGQFSEGYKLFLEMPERNVRSWNVM 247
+GL L + A++ Y D E + +F + +N+ +WN M
Sbjct: 179 VHGLA------LKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSM 232
Query: 248 ISGCLSANRVDEAIHLFETMP------DR----NHVSWTAMVSGLAQNKMVEVARKYFDI 297
I+ N +AI +F M DR N S S L N++ + + +
Sbjct: 233 IAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSL 292
Query: 298 MPFKDMAAWSAMITAYVD--EKLLGEALELFNLVPE----KNVGIWNTIIDGY-VRNGEA 350
+ + + TA + ++L + + + L E +++ WN II + V + E
Sbjct: 293 TVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDPE- 351
Query: 351 GEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQA---HAMVIHLGFEQNTWVTNAL 407
A+ LF + + P T +S++ +C G+V A HA VI GF +T + N+L
Sbjct: 352 -RAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSL 410
Query: 408 ITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDE 467
I Y+K G L M VF+ + S+DVVSW +M+ AY+ HG L VF +M PD
Sbjct: 411 IHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDS 467
Query: 468 ITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVS 527
TF+ LLSACSHAG V +G R+F S+ ++ HY+C++DML RA EA +V+
Sbjct: 468 ATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIK 527
Query: 528 TIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSL-EPTSSGGYVLLSNAYAAEEQW 586
+ P + D V +ALLG+C+ HGN ++ KL L EPT+S Y+ +SN Y AE +
Sbjct: 528 QM-PMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSF 586
Query: 587 DEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRE 646
+E K M+ V+K S ++ K H F G R P E +Y L++ L ++E
Sbjct: 587 NEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKR-LISWLKE 645
Query: 647 TGYTPE 652
GY PE
Sbjct: 646 MGYVPE 651
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 249 bits (635), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 175/630 (27%), Positives = 308/630 (48%), Gaps = 75/630 (11%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDV---- 117
+ + + G L ARK+F+EM +RD V + +MI Y + V A ++ M + +
Sbjct: 88 VNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGP 147
Query: 118 VAQSAMVDGYAKAGRLDNAREV-----FDNMTERNAFSWTSLISGYFRCGRTEEALQLFD 172
V M+ G + +L + FD + S+++ Y +C +A LFD
Sbjct: 148 VTLLEMLSGVLEITQLQCLHDFAVIYGFDC----DIAVMNSMLNLYCKCDHVGDAKDLFD 203
Query: 173 QMSERSVVTWTTMVSGFAQNGLVDHARRFF------DLMPEKNTIAW------------- 213
QM +R +V+W TM+SG+A G + + L P++ T
Sbjct: 204 QMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEM 263
Query: 214 --------------------TAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLS 253
TA++ YL G+ Y++ +P ++V W VMISG +
Sbjct: 264 GRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMR 323
Query: 254 ANRVDEAIHLFETM----PDRNHVSWTAMVSGLAQNKMVE--------VARKYFDIMPFK 301
R ++A+ +F M D + + ++V+ AQ + V R + +
Sbjct: 324 LGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTL---- 379
Query: 302 DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILM- 360
D A +++IT Y L ++L +F + E+++ WN II GY +N + +AL LF M
Sbjct: 380 DTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMK 439
Query: 361 LRSCFRPCVTTMTSIITSCD--GMVEIMQ-AHAMVIHLGFEQNTWVTNALITLYSKSGDL 417
++ + T+ S++ +C G + + + H +VI + V AL+ +YSK G L
Sbjct: 440 FKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYL 499
Query: 418 CSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSAC 477
+A F+ + KDVVSW +I Y HG G AL++++ + SG +P+ + F+ +LS+C
Sbjct: 500 EAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSC 559
Query: 478 SHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVS-TIPPSEIDE 536
SH G+V QG ++F S+ + + EH +C+VD+L RA + +A ID
Sbjct: 560 SHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSID- 618
Query: 537 AVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRM 596
VL +L AC+ +G +V + I + ++ L+P +G YV L +++AA ++WD+ ++ +M
Sbjct: 619 -VLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQM 677
Query: 597 KEKNVKKISGFSQIQVKGKNHLFFVGERSH 626
+ +KK+ G+S+I++ GK FF+ SH
Sbjct: 678 RSLGLKKLPGWSKIEMNGKTTTFFMNHTSH 707
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 137/476 (28%), Positives = 223/476 (46%), Gaps = 32/476 (6%)
Query: 116 DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMS 175
D S++V+ YAK G L +AR+VF+ M ER+ WT++I Y R G EA L ++M
Sbjct: 80 DFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMR 139
Query: 176 ERSV----VTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIA-WTAMVKSYLDNGQFSEGY 230
+ + VT M+SG + + F + IA +M+ Y +
Sbjct: 140 FQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAK 199
Query: 231 KLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM------PDRNHVSWTAMVSG--- 281
LF +M +R++ SWN MISG S + E + L M PD+ + VSG
Sbjct: 200 DLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMC 259
Query: 282 -LAQNKMV--EVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWN 338
L +M+ ++ + FD+ DM +A+IT Y+ + + +P K+V W
Sbjct: 260 DLEMGRMLHCQIVKTGFDV----DMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWT 315
Query: 339 TIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI---MQAHAMVIHL 395
+I G +R G A +AL +F ML+S + S++ SC + H V+
Sbjct: 316 VMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRH 375
Query: 396 GFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVF 455
G+ +T N+LIT+Y+K G L ++++FE + +D+VSW A+I YA + AL +F
Sbjct: 376 GYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLF 435
Query: 456 ARM-VTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLG 514
M + + D T V LL ACS AG + G+ + + ++ + + LVDM
Sbjct: 436 EEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVD-TALVDMYS 494
Query: 515 RAGLVNEAMDVVSTIPPSEIDE-AVLVALLGACKLHGNIKVANSIGQKLL--SLEP 567
+ G + A +I ++ +L+A G HG +A I + L +EP
Sbjct: 495 KCGYLEAAQRCFDSISWKDVVSWGILIAGYG---FHGKGDIALEIYSEFLHSGMEP 547
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 18/225 (8%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGA-----ETIFKAMS 113
N IT+ + G L ++ +F+ M +RD VS+N++I+ Y +N D+ A E FK +
Sbjct: 385 NSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQ 444
Query: 114 ERDVVAQSAMVDGYAKAGRLDNARE----VFDNMTERNAFSWTSLISGYFRCGRTEEALQ 169
+ D +++ + AG L + V + + T+L+ Y +CG E A +
Sbjct: 445 QVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQR 504
Query: 170 LFDQMSERSVVTWTTMVSGFAQNGLVDHA----RRFFDLMPEKNTIAWTAMVKSYLDNGQ 225
FD +S + VV+W +++G+ +G D A F E N + + A++ S NG
Sbjct: 505 CFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGM 564
Query: 226 FSEGYKLFLEM-----PERNVRSWNVMISGCLSANRVDEAIHLFE 265
+G K+F M E N ++ A R+++A ++
Sbjct: 565 VQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYK 609
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 121/267 (45%), Gaps = 33/267 (12%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDA----------VSYNSMIAVYLKNKDVHGAETI 108
V I+ L R G+ ++A +F EM Q + V+ + + + VHG +
Sbjct: 315 TVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHG--YV 372
Query: 109 FKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEAL 168
+ D A ++++ YAK G LD + +F+ M ER+ SW ++ISGY + +AL
Sbjct: 373 LRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKAL 432
Query: 169 QLFDQMSERSV--VTWTTMVS--------GFAQNGLVDHA---RRFFDLMPEKNTIAWTA 215
LF++M ++V V T+VS G G + H R F ++ TA
Sbjct: 433 LLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFI----RPCSLVDTA 488
Query: 216 MVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM----PDRN 271
+V Y G + F + ++V SW ++I+G + D A+ ++ + N
Sbjct: 489 LVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPN 548
Query: 272 HVSWTAMVSGLAQNKMVEVARKYFDIM 298
HV + A++S + N MV+ K F M
Sbjct: 549 HVIFLAVLSSCSHNGMVQQGLKIFSSM 575
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 3/143 (2%)
Query: 337 WNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI---MQAHAMVI 393
+N+ I+ +G+ + L F ML + P T S++ +C + + + H V+
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 394 HLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQ 453
GF + +++++L+ LY+K G L A VFE ++ +DVV WTAMI Y+ G A
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 454 VFARMVTSGTKPDEITFVGLLSA 476
+ M G KP +T + +LS
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLSG 156
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 248 bits (634), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 143/451 (31%), Positives = 248/451 (54%), Gaps = 13/451 (2%)
Query: 194 LVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLS 253
L+ +A F + N + +++ + + S+ + + +M + + N+ +
Sbjct: 66 LLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIK 125
Query: 254 ANRVDEAIHLFETMPDR-------NHVSW-TAMVSGLAQNKMVEVARKYFDIMPFKDMAA 305
A+ E + + E + N V ++V A + A + F M F+D+ +
Sbjct: 126 ASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVS 185
Query: 306 WSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCF 365
W++M+ Y ++ A E+F+ +P +N+ W+ +I+GY +N +A+ LF M R
Sbjct: 186 WTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGV 245
Query: 366 RPCVTTMTSIITSCD--GMVEIMQ-AHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAML 422
T M S+I+SC G +E + A+ V+ N + AL+ ++ + GD+ A+
Sbjct: 246 VANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIH 305
Query: 423 VFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGL 482
VFE L D +SW+++I A HGH H A+ F++M++ G P ++TF +LSACSH GL
Sbjct: 306 VFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGL 365
Query: 483 VNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVAL 542
V +G +++++K + + ++EHY C+VDMLGRAG + EA + + + + +L AL
Sbjct: 366 VEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKP-NAPILGAL 424
Query: 543 LGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVK 602
LGACK++ N +VA +G L+ ++P SG YVLLSN YA QWD+ +R MKEK VK
Sbjct: 425 LGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVK 484
Query: 603 KISGFSQIQVKGKNHLFFVG-ERSHPQVEEI 632
K G+S I++ GK + F +G ++ HP++ +I
Sbjct: 485 KPPGWSLIEIDGKINKFTMGDDQKHPEMGKI 515
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 150/287 (52%), Gaps = 28/287 (9%)
Query: 114 ERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQ 173
+ DV ++++V YA G + A +F M R+ SWTS+++GY +CG E A ++FD+
Sbjct: 149 QNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDE 208
Query: 174 MSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIA----WTAMVKSYLDNGQFSEG 229
M R++ TW+ M++G+A+N + A F+ M + +A +++ S G G
Sbjct: 209 MPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFG 268
Query: 230 YKLFLEMPERNVRSWNVMISGCL-----SANRVDEAIHLFETMPDRNHVSWTAMVSGLAQ 284
+ + E ++ + N+++ L +++AIH+FE +P+ + +SW++++ GLA
Sbjct: 269 ERAY-EYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAV 327
Query: 285 NKMVEVARKYFDIM------PFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGI-- 336
+ A YF M P +D+ ++A+++A L+ + LE++ + +K+ GI
Sbjct: 328 HGHAHKAMHYFSQMISLGFIP-RDV-TFTAVLSACSHGGLVEKGLEIYENM-KKDHGIEP 384
Query: 337 ----WNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC 379
+ I+D R G+ EA FIL + +P + +++ +C
Sbjct: 385 RLEHYGCIVDMLGRAGKLAEAEN-FILKMH--VKPNAPILGALLGAC 428
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 114/228 (50%), Gaps = 12/228 (5%)
Query: 83 QRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDN 142
Q D NS++ +Y + A IF M RDVV+ ++MV GY K G ++NARE+FD
Sbjct: 149 QNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDE 208
Query: 143 MTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTT----MVSGFAQNGLVDHA 198
M RN F+W+ +I+GY + E+A+ LF+ M VV T ++S A G ++
Sbjct: 209 MPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFG 268
Query: 199 RRFFDLMPEK----NTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSA 254
R ++ + + N I TA+V + G + +F +PE + SW+ +I G
Sbjct: 269 ERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVH 328
Query: 255 NRVDEAIHLFETMPD----RNHVSWTAMVSGLAQNKMVEVARKYFDIM 298
+A+H F M V++TA++S + +VE + ++ M
Sbjct: 329 GHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENM 376
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 104/212 (49%), Gaps = 14/212 (6%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYA 128
G + A ++F +M RD VS+ SM+A Y K V A +F M R++ S M++GYA
Sbjct: 166 GFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYA 225
Query: 129 KAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQLFDQMSER----SVV 180
K + A ++F+ M N S+IS G E + ++ + + +++
Sbjct: 226 KNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLI 285
Query: 181 TWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPE-- 238
T +V F + G ++ A F+ +PE ++++W++++K +G + F +M
Sbjct: 286 LGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLG 345
Query: 239 ---RNVRSWNVMISGCLSANRVDEAIHLFETM 267
R+V ++ ++S C V++ + ++E M
Sbjct: 346 FIPRDV-TFTAVLSACSHGGLVEKGLEIYENM 376
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 248 bits (633), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 183/709 (25%), Positives = 322/709 (45%), Gaps = 128/709 (18%)
Query: 40 LRNFTASISISHDWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKN 99
L+ F + I D + N+ + L + G++ EAR++FD+MP+RD ++N+MI Y +
Sbjct: 13 LKPFGSCIHSYADRTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNS 72
Query: 100 KDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNM----TERNAFSWTS-- 153
+ + AE +F++ ++ ++ +A++ GY K+G A +F M + N ++ S
Sbjct: 73 RRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVL 132
Query: 154 ---------------------------------LISGYFRCGRTEEALQLFDQM-SERSV 179
L++ Y +C R EA LF+ M E++
Sbjct: 133 RMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNN 192
Query: 180 VTWTTMVSGFAQNGLVDHARRFF-DLMPE------------------------------- 207
VTWT+M++G++QNG A F DL E
Sbjct: 193 VTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCC 252
Query: 208 -------KNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEA 260
N +A++ Y + L M +V SWN MI GC+ + EA
Sbjct: 253 IVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEA 312
Query: 261 IHLFETMPDRN----HVSWTAMVSGLAQNKM-VEVARKYFDIMPFKDMAAW----SAMIT 311
+ +F M +R+ + ++++ A ++ +++A ++ A + +A++
Sbjct: 313 LSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVD 372
Query: 312 AYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTT 371
Y ++ AL++F + EK+V W ++ G NG EAL+LF M P
Sbjct: 373 MYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIV 432
Query: 372 MTSIITSCDGMVEI---MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLK 428
S++++ + + Q H I GF + V N+L+T+Y+K G L A ++F ++
Sbjct: 433 TASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSME 492
Query: 429 SKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRR 488
+D+++WT +IV YA +G L+ +R
Sbjct: 493 IRDLITWTCLIVGYAKNG-----------------------------------LLEDAQR 517
Query: 489 VFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKL 548
FDS++ Y + EHY+C++D+ GR+G + ++ + E D V A+L A +
Sbjct: 518 YFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQME-VEPDATVWKAILAASRK 576
Query: 549 HGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFS 608
HGNI+ + L+ LEP ++ YV LSN Y+A + DE A VR+ MK +N+ K G S
Sbjct: 577 HGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCS 636
Query: 609 QIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPENSLLI 657
++ KGK H F +R HP++ EIY + + + L++E GY + S +
Sbjct: 637 WVEEKGKVHSFMSEDRRHPRMVEIYSKVDE-MMLLIKEAGYFADMSFAL 684
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 149/308 (48%), Gaps = 19/308 (6%)
Query: 236 MPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYF 295
M N R W L IH + DR + ++ L+++ V+ AR+ F
Sbjct: 1 MHRLNYRKWR------LPLKPFGSCIHSY---ADRTKLHSNLLLGDLSKSGRVDEARQMF 51
Query: 296 DIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALR 355
D MP +D W+ MI AY + + L +A +LF P KN WN +I GY ++G EA
Sbjct: 52 DKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFN 111
Query: 356 LFILMLRSCFRPCVTTMTSIITSCDGMVEIM---QAHAMVIHLGFEQNTWVTNALITLYS 412
LF M +P T+ S++ C +V ++ Q H I GF+ + V N L+ +Y+
Sbjct: 112 LFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYA 171
Query: 413 KSGDLCSAMLVFELLKS-KDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFV 471
+ + A +FE ++ K+ V+WT+M+ Y+ +G A++ F + G + ++ TF
Sbjct: 172 QCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFP 231
Query: 472 GLLSACSHAGLVNQGRRVFDSI-KGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIP 530
+L+AC+ G +V I K + N+ V+ S L+DM + + A ++ +
Sbjct: 232 SVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQ--SALIDMYAKCREMESARALLEGM- 288
Query: 531 PSEIDEAV 538
E+D+ V
Sbjct: 289 --EVDDVV 294
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 145/455 (31%), Positives = 246/455 (54%), Gaps = 13/455 (2%)
Query: 195 VDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLF-------LEMPERNVRSWNVM 247
+D+A R F+ + N + +++++Y N + + +++ E+P+R +
Sbjct: 58 MDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFK 117
Query: 248 ISGCLSANRVDEAIH--LFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAA 305
L + + + +H L + P + V+ A++ + + A K FD M +D+ +
Sbjct: 118 SCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVIS 177
Query: 306 WSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCF 365
W+++++ Y + +A LF+L+ +K + W +I GY G EA+ F M +
Sbjct: 178 WNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGI 237
Query: 366 RPCVTTMTSIITSCD--GMVEIMQ-AHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAML 422
P ++ S++ SC G +E+ + H GF + T V NALI +YSK G + A+
Sbjct: 238 EPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQ 297
Query: 423 VFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGL 482
+F ++ KDV+SW+ MI YA HG+ H A++ F M + KP+ ITF+GLLSACSH G+
Sbjct: 298 LFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGM 357
Query: 483 VNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVAL 542
+G R FD ++ Y + K+EHY CL+D+L RAG + A+++ T+ P + D + +L
Sbjct: 358 WQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTM-PMKPDSKIWGSL 416
Query: 543 LGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVK 602
L +C+ GN+ VA L+ LEP G YVLL+N YA +W++ +++RK ++ +N+K
Sbjct: 417 LSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMK 476
Query: 603 KISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQ 637
K G S I+V F G+ S P EI LQ
Sbjct: 477 KTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQ 511
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 149/327 (45%), Gaps = 29/327 (8%)
Query: 75 RKLFDEMPQRDAVSY-----NSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAK 129
RK F E+P R + S+ + YL K VHG + K VV ++A++D Y K
Sbjct: 101 RKSF-ELPDRFTFPFMFKSCASLGSCYL-GKQVHGH--LCKFGPRFHVVTENALIDMYMK 156
Query: 130 AGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGF 189
L +A +VFD M ER+ SW SL+SGY R G+ ++A LF M ++++V+WT M+SG+
Sbjct: 157 FDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGY 216
Query: 190 AQNGLVDHARRFFDLMP----EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRS-- 243
G A FF M E + I+ +++ S G G + L R
Sbjct: 217 TGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQT 276
Query: 244 --WNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFK 301
N +I + +AI LF M ++ +SW+ M+SG A + A + F+ M
Sbjct: 277 GVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRA 336
Query: 302 DMA----AWSAMITAYVDEKLLGEALELFNLVP-----EKNVGIWNTIIDGYVRNGEAGE 352
+ + +++A + E L F+++ E + + +ID R G+
Sbjct: 337 KVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLER 396
Query: 353 ALRLFILMLRSCFRPCVTTMTSIITSC 379
A+ + M +P S+++SC
Sbjct: 397 AVEITKTM---PMKPDSKIWGSLLSSC 420
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 136/310 (43%), Gaps = 54/310 (17%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVV 118
N I + + L +A K+FDEM +RD +S+NS+++ Y + + A+ +F M ++ +V
Sbjct: 148 NALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIV 207
Query: 119 AQSAMVDGYAKAGRLDNAREVFDNM----------------------------------T 144
+ +AM+ GY G A + F M
Sbjct: 208 SWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYA 267
Query: 145 ERNAF-----SWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHAR 199
ER F +LI Y +CG +A+QLF QM + V++W+TM+SG+A +G A
Sbjct: 268 ERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAI 327
Query: 200 RFFDLMP----EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMP-----ERNVRSWNVMISG 250
F+ M + N I + ++ + G + EG + F M E + + +I
Sbjct: 328 ETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDV 387
Query: 251 CLSANRVDEAIHLFETMPDR-NHVSWTAMVSGLAQNKMVEVARKYFD----IMPFKDMAA 305
A +++ A+ + +TMP + + W +++S ++VA D + P +DM
Sbjct: 388 LARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEP-EDMGN 446
Query: 306 WSAMITAYVD 315
+ + Y D
Sbjct: 447 YVLLANIYAD 456
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 146/447 (32%), Positives = 248/447 (55%), Gaps = 26/447 (5%)
Query: 227 SEGYKLF--LEMPERNVRSWNVMISGCLSANRVDEAIHLFETM-------PDRNHVSW-T 276
S +K+F +E P NV WN +I G A L+ M PD + +
Sbjct: 70 SYAHKVFSKIEKP-INVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 277 AMVSGLAQNKMVE-----VARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPE 331
V+ +A ++ E V R F + + ++++ Y + + A ++F+ +PE
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIY----VQNSLLHLYANCGDVASAYKVFDKMPE 184
Query: 332 KNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIM---QA 388
K++ WN++I+G+ NG+ EAL L+ M +P T+ S++++C + + +
Sbjct: 185 KDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRV 244
Query: 389 HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHG 448
H +I +G +N +N L+ LY++ G + A +F+ + K+ VSWT++IV A +G G
Sbjct: 245 HVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFG 304
Query: 449 HHALQVFARM-VTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYS 507
A+++F M T G P EITFVG+L ACSH G+V +G F ++ Y + ++EH+
Sbjct: 305 KEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFG 364
Query: 508 CLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEP 567
C+VD+L RAG V +A + + ++P + + + LLGAC +HG+ +A ++L LEP
Sbjct: 365 CMVDLLARAGQVKKAYEYIKSMP-MQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEP 423
Query: 568 TSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHP 627
SG YVLLSN YA+E++W + ++RK+M VKK+ G S ++V + H F +G++SHP
Sbjct: 424 NHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHP 483
Query: 628 QVEEIYGFLQQSLQPLMRETGYTPENS 654
Q + IY L++ + +R GY P+ S
Sbjct: 484 QSDAIYAKLKE-MTGRLRSEGYVPQIS 509
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 112/246 (45%), Gaps = 22/246 (8%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQS----AMV 124
G + A K+FD+MP++D V++NS+I + +N A ++ M+ + + +++
Sbjct: 170 GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLL 229
Query: 125 DGYAKAGRLDNAREVFDNMTE----RNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVV 180
AK G L + V M + RN S L+ Y RCGR EEA LFD+M +++ V
Sbjct: 230 SACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSV 289
Query: 181 TWTTMVSGFAQNGLVDHARRFFDLMPEKN-----TIAWTAMVKSYLDNGQFSEGYKLFLE 235
+WT+++ G A NG A F M I + ++ + G EG++ F
Sbjct: 290 SWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRR 349
Query: 236 MPER-----NVRSWNVMISGCLSANRVDEAIHLFETMP-DRNHVSWTAMVSGL---AQNK 286
M E + + M+ A +V +A ++MP N V W ++ +
Sbjct: 350 MREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD 409
Query: 287 MVEVAR 292
+ E AR
Sbjct: 410 LAEFAR 415
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 169/389 (43%), Gaps = 50/389 (12%)
Query: 4 LEGYLAFVLKTLVMKMGVCYHHRRRVFSQCQ-PIFRFLRNFTASISISHDWSLRKRNVEI 62
L +L F L +L + Y H+ VFS+ + PI F+ N +L + EI
Sbjct: 52 LGKHLIFYLVSLPSPPPMSYAHK--VFSKIEKPINVFIWN-----------TLIRGYAEI 98
Query: 63 TILGRRGKLKEARKLFDEMP-----QRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERD- 116
G A L+ EM + D +Y +I DV ETI +
Sbjct: 99 ------GNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGF 152
Query: 117 ---VVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQ 173
+ Q++++ YA G + +A +VFD M E++ +W S+I+G+ G+ EEAL L+ +
Sbjct: 153 GSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTE 212
Query: 174 MSERSV----VTWTTMVSGFAQNGLVDHARRFFDLMPE----KNTIAWTAMVKSYLDNGQ 225
M+ + + T +++S A+ G + +R M + +N + ++ Y G+
Sbjct: 213 MNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGR 272
Query: 226 FSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRN-----HVSWTAMVS 280
E LF EM ++N SW +I G EAI LF+ M +++ ++
Sbjct: 273 VEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILY 332
Query: 281 GLAQNKMVEVARKYFDIM--PFK---DMAAWSAMITAYVDEKLLGEALELFNLVP-EKNV 334
+ MV+ +YF M +K + + M+ + +A E +P + NV
Sbjct: 333 ACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNV 392
Query: 335 GIWNTIIDGYVRNGEA--GEALRLFILML 361
IW T++ +G++ E R+ IL L
Sbjct: 393 VIWRTLLGACTVHGDSDLAEFARIQILQL 421
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 158/567 (27%), Positives = 289/567 (50%), Gaps = 20/567 (3%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMS-ERDV 117
NV ++ + G+L AR+LF+ MP++D V+ NS++ Y+ N A +FK ++ D
Sbjct: 128 NVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADA 187
Query: 118 VAQSAMVDGYAKAGRLDNAREVFDNM----TERNAFSWTSLISGYFRCGRTEEALQLFDQ 173
+ + ++ A+ L +++ + E ++ +SL++ Y +CG A + +Q
Sbjct: 188 ITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQ 247
Query: 174 MSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLF 233
+ E + + ++SG+A G V+ +R FD + I W +M+ Y+ N E LF
Sbjct: 248 IREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLF 307
Query: 234 LEM---PERNVRSWNVMISGCLSANRVDEAIHL------FETMPDRNHVSWTAMVSGLAQ 284
EM + R+ +I+ C+ ++ + F + D V + ++ ++
Sbjct: 308 NEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDD--IVVASTLLDMYSK 365
Query: 285 NKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGY 344
A K F + D ++MI Y + +A +F + K++ WN++ +G+
Sbjct: 366 CGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGF 425
Query: 345 VRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIM---QAHAMVIHLGFEQNT 401
+NG E L F M + +++S+I++C + + Q A +G + +
Sbjct: 426 SQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQ 485
Query: 402 WVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTS 461
V+++LI LY K G + VF+ + D V W +MI YA +G G A+ +F +M +
Sbjct: 486 VVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVA 545
Query: 462 GTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNE 521
G +P +ITF+ +L+AC++ GLV +GR++F+S+K + EH+SC+VD+L RAG V E
Sbjct: 546 GIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEE 605
Query: 522 AMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYA 581
A+++V + P ++D ++ ++L C +G + +K++ LEP +S YV LS +A
Sbjct: 606 AINLVEEM-PFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFA 664
Query: 582 AEEQWDEFAQVRKRMKEKNVKKISGFS 608
W+ A VRK M+E NV K G S
Sbjct: 665 TSGDWESSALVRKLMRENNVTKNPGSS 691
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 220/459 (47%), Gaps = 47/459 (10%)
Query: 117 VVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSE 176
V+ + ++ Y+++G++ AR +FD M +RN FSW ++I GY G +L+ FD M E
Sbjct: 62 VIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPE 121
Query: 177 RSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEM 236
R +W +VSGFA+ G + ARR F+ MPEK+ + +++ Y+ NG E +LF E+
Sbjct: 122 RDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL 181
Query: 237 P-ERNVRSWNVMISGC--LSANRVDEAIH---LFETMPDRNHVSWTAMVSGLAQNKMVEV 290
+ + ++ C L A + + IH L + + ++ +++V+ A+ + +
Sbjct: 182 NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMN-SSLVNVYAKCGDLRM 240
Query: 291 ARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEA 350
A + + D + SA+I+ Y + + E+ LF+ + V +WN++I GY+ N
Sbjct: 241 ASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMK 300
Query: 351 GEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI---MQAHAMVIHLGFEQNTWVTNAL 407
EAL LF M R+ R T+ ++I +C G+ + Q H G + V + L
Sbjct: 301 MEALVLFNEM-RNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTL 359
Query: 408 ITLYSKSGD-----------------LCSAML--------------VFELLKSKDVVSWT 436
+ +YSK G L ++M+ VFE +++K ++SW
Sbjct: 360 LDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWN 419
Query: 437 AMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVF--DSIK 494
+M ++ +G L+ F +M DE++ ++SAC+ + G +VF +I
Sbjct: 420 SMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIV 479
Query: 495 GAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSE 533
G L+ S L+D+ + G V V T+ S+
Sbjct: 480 G---LDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSD 515
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 245 bits (625), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 167/560 (29%), Positives = 266/560 (47%), Gaps = 56/560 (10%)
Query: 133 LDNAREVFDNMTER-NAFSWTSLISGYFRCGRTEEALQLFDQM------SERSVVTWTTM 185
LD A+ +F N T N F + ++IS E L+ M +R +
Sbjct: 84 LDLAKLLFLNFTPNPNVFVYNTMISAV--SSSKNECFGLYSSMIRHRVSPDRQTFLYLMK 141
Query: 186 VSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWN 245
S F H W ++VK Y++ G F K+F MP +V S+N
Sbjct: 142 ASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFN 201
Query: 246 VMISGCLSANRVDEAIHLFETM------PDR----------NHVS----------W---- 275
VMI G EA+ L+ M PD H+S W
Sbjct: 202 VMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERR 261
Query: 276 -----------TAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALE 324
A++ + K +A++ FD M KDM +W+ M+ +V + A
Sbjct: 262 GPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQA 321
Query: 325 LFNLVPEKNVGIWNTIIDGYVRNGEAGEALR--LFILMLRSCFRPCVTTMTSIITSCDGM 382
+F+ +P++++ WN+++ GY + G +R + + + +P TM S+I+
Sbjct: 322 VFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANN 381
Query: 383 VEIMQA---HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMI 439
E+ H +VI L + + ++++ALI +Y K G + A +VF+ KDV WT+MI
Sbjct: 382 GELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMI 441
Query: 440 VAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNL 499
A HG+G ALQ+F RM G P+ +T + +L+ACSH+GLV +G VF+ +K +
Sbjct: 442 TGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGF 501
Query: 500 NLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIG 559
+ + EHY LVD+L RAG V EA D+V P +++ ++L AC+ +I+ A
Sbjct: 502 DPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELAL 561
Query: 560 QKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQ-IQVKGKNHL 618
+LL LEP GGYVLLSN YA +W + R+ M+ + VKK +G+S + V+G +
Sbjct: 562 TELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRF 621
Query: 619 FFVGERSHPQVEEIYGFLQQ 638
+++HP+ EI LQ
Sbjct: 622 VAAEKQNHPRWTEIKRILQH 641
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 159/376 (42%), Gaps = 74/376 (19%)
Query: 89 YNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMT---- 144
+NS++ Y++ + AE +F M DV + + M+ GYAK G A +++ M
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGI 228
Query: 145 ------------------------------ERNAFSWTS-------LISGYFRCGRTEEA 167
ER ++S L+ YF+C + A
Sbjct: 229 EPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLA 288
Query: 168 LQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFS 227
+ FD M ++ + +W TMV GF + G ++ A+ FD MP+++ ++W +++ Y G
Sbjct: 289 KRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKG--- 345
Query: 228 EGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKM 287
+R VR E + + PDR V+ +++SG A N
Sbjct: 346 --------CDQRTVREL------------FYEMTIVEKVKPDR--VTMVSLISGAANNGE 383
Query: 288 VEVARKYFDI---MPFK-DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDG 343
+ R + + K D SA+I Y ++ A +F EK+V +W ++I G
Sbjct: 384 LSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITG 443
Query: 344 YVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC--DGMVE--IMQAHAMVIHLGFEQ 399
+G +AL+LF M P T+ +++T+C G+VE + + M GF+
Sbjct: 444 LAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDP 503
Query: 400 NTWVTNALITLYSKSG 415
T +L+ L ++G
Sbjct: 504 ETEHYGSLVDLLCRAG 519
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 166/389 (42%), Gaps = 66/389 (16%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKN----------------------------- 99
G A K+F MP D S+N MI Y K
Sbjct: 180 GNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLL 239
Query: 100 ------------KDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERN 147
K VHG + +++ +A++D Y K A+ FD M +++
Sbjct: 240 VCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKD 299
Query: 148 AFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARR--FFDLM 205
SW +++ G+ R G E A +FDQM +R +V+W +++ G+++ G R F+++
Sbjct: 300 MRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMT 359
Query: 206 ------PEKNTIAWTAMVKSYLDNGQFSEG---YKLFLEMPER-NVRSWNVMISGCLSAN 255
P++ T+ +++ +NG+ S G + L + + + + + +I
Sbjct: 360 IVEKVKPDRVTM--VSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCG 417
Query: 256 RVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWS----AMIT 311
++ A +F+T +++ WT+M++GLA + + A + F M + + + A++T
Sbjct: 418 IIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLT 477
Query: 312 AYVDEKLLGEALELFNLVPEK-----NVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFR 366
A L+ E L +FN + +K + +++D R G EA I+ + R
Sbjct: 478 ACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKD--IVQKKMPMR 535
Query: 367 PCVTTMTSIITSCDGMVEIMQAHAMVIHL 395
P + SI+++C G +I A + L
Sbjct: 536 PSQSMWGSILSACRGGEDIETAELALTEL 564
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 122/258 (47%), Gaps = 21/258 (8%)
Query: 55 LRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNK-DVHGAETIFKAMS 113
+R N + R G ++ A+ +FD+MP+RD VS+NS++ Y K D +F M+
Sbjct: 300 MRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMT 359
Query: 114 -----ERDVVAQSAMVDGYAKAGRLDNAREVFDNMT----ERNAFSWTSLISGYFRCGRT 164
+ D V +++ G A G L + R V + + +AF ++LI Y +CG
Sbjct: 360 IVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGII 419
Query: 165 EEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSY 220
E A +F +E+ V WT+M++G A +G A + F M E+ N + A++ +
Sbjct: 420 ERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTAC 479
Query: 221 LDNGQFSEGYKLFLEMPER-----NVRSWNVMISGCLSANRVDEAIHLFE-TMPDRNHVS 274
+G EG +F M ++ + ++ A RV+EA + + MP R S
Sbjct: 480 SHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQS 539
Query: 275 -WTAMVSGLAQNKMVEVA 291
W +++S + +E A
Sbjct: 540 MWGSILSACRGGEDIETA 557
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 107/238 (44%), Gaps = 14/238 (5%)
Query: 296 DIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALR 355
D P + +SA+ E L L N P NV ++NT+I + E
Sbjct: 65 DTFPMSRLIFFSAITYP---ENLDLAKLLFLNFTPNPNVFVYNTMISAV--SSSKNECFG 119
Query: 356 LFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLG-FEQNTWVTNALITLYSKS 414
L+ M+R P T ++ + + E+ Q H +I G ++ N+L+ Y +
Sbjct: 120 LYSSMIRHRVSPDRQTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMEL 179
Query: 415 GDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLL 474
G+ A VF + DV S+ MIV YA G AL+++ +MV+ G +PDE T + LL
Sbjct: 180 GNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLL 239
Query: 475 SACSHAGLVNQGRRVFDSIK---GAYNLNLKVEHYSCLVDMLGR---AGLVNEAMDVV 526
C H + G+ V I+ Y+ NL + + L+DM + +GL A D +
Sbjct: 240 VCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSN--ALLDMYFKCKESGLAKRAFDAM 295
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 161/524 (30%), Positives = 267/524 (50%), Gaps = 27/524 (5%)
Query: 114 ERDVVAQSAMVDGYAKAGRLDNAREVFDNMT--ERNAFSWTSLISGYFRCGRT--EEALQ 169
E +VV S++ + Y ++ RLD A F+ + +RN SW +++SGY + + L
Sbjct: 36 EDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLL 95
Query: 170 LFDQMSERS--------VVTWTTMVS-GFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSY 220
L+++M V V G +NG++ H + + + + +A ++V+ Y
Sbjct: 96 LYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVA-PSLVEMY 154
Query: 221 LDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWT 276
G K+F E+P RN W V++ G L ++ E LF M D + ++
Sbjct: 155 AQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLI 214
Query: 277 AMVSGLAQNKMVEVARKYFDI---MPFKDMAAW--SAMITAYVDEKLLGEALELFNLVPE 331
+V +V + + F D + + +++I YV +LL A +LF +
Sbjct: 215 CLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVD 274
Query: 332 KNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQA--- 388
+NV +W T+I G+ + A EA LF MLR P T+ +I+ SC + +
Sbjct: 275 RNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSV 334
Query: 389 HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHG 448
H +I G E + + I +Y++ G++ A VF+++ ++V+SW++MI A+ +G
Sbjct: 335 HGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLF 394
Query: 449 HHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSC 508
AL F +M + P+ +TFV LLSACSH+G V +G + F+S+ Y + + EHY+C
Sbjct: 395 EEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYAC 454
Query: 509 LVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPT 568
+VD+LGRAG + EA + +P + A ALL AC++H + +A I +KLLS+EP
Sbjct: 455 MVDLLGRAGEIGEAKSFIDNMPVKPMASA-WGALLSACRIHKEVDLAGEIAEKLLSMEPE 513
Query: 569 SSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQV 612
S YVLLSN YA W+ VR++M K +K G S +V
Sbjct: 514 KSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 164/368 (44%), Gaps = 99/368 (26%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLK----------------------- 98
+ + + G ++ A+K+FDE+P R++V + ++ YLK
Sbjct: 151 VEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDA 210
Query: 99 ------------------NKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVF 140
K VHG +I ++ ++ Q++++D Y K LDNAR++F
Sbjct: 211 LTLICLVKACGNVFAGKVGKCVHGV-SIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLF 269
Query: 141 DNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV--------------------- 179
+ +RN WT+LISG+ +C R EA LF QM S+
Sbjct: 270 ETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLR 329
Query: 180 ------------------VTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYL 221
V +T+ + +A+ G + AR FD+MPE+N I+W++M+ ++
Sbjct: 330 HGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFG 389
Query: 222 DNGQFSEGYKLFLEMPERNVRSWNV----MISGCLSANRVDEAIHLFETM-------PDR 270
NG F E F +M +NV +V ++S C + V E FE+M P+
Sbjct: 390 INGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEE 449
Query: 271 NHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMA-AWSAMITA---YVDEKLLGEALE-L 325
H + MV L + + A+ + D MP K MA AW A+++A + + L GE E L
Sbjct: 450 EH--YACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKL 507
Query: 326 FNLVPEKN 333
++ PEK+
Sbjct: 508 LSMEPEKS 515
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 151/456 (33%), Positives = 247/456 (54%), Gaps = 37/456 (8%)
Query: 229 GYKLFLEMPERNVRSWNVMISGCL-SANRVDEAIHLF-------ETMPDRNHVSWT---- 276
+++F + + WN +I C +R +EA L+ E+ PD++ +
Sbjct: 102 AFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKAC 161
Query: 277 AMVSGLAQNKMV--EVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNV 334
A + G ++ K V ++ + F D+ + +I Y L A ++F+ +PE+++
Sbjct: 162 AYIFGFSEGKQVHCQIVKHGFG----GDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSL 217
Query: 335 GIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI---MQAHAM 391
WN++ID VR GE AL+LF M RS F P TM S++++C G+ + AHA
Sbjct: 218 VSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAF 276
Query: 392 VIH---LGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHG 448
++ + + V N+LI +Y K G L A VF+ ++ +D+ SW AMI+ +A HG
Sbjct: 277 LLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRA 336
Query: 449 HHALQVFARMVTS--GTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHY 506
A+ F RMV +P+ +TFVGLL AC+H G VN+GR+ FD + Y + +EHY
Sbjct: 337 EEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHY 396
Query: 507 SCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGA-CKLHGNIKVANSIGQKLL-- 563
C+VD++ RAG + EA+D+V ++ P + D + +LL A CK +++++ I + ++
Sbjct: 397 GCIVDLIARAGYITEAIDMVMSM-PMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGT 455
Query: 564 -----SLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHL 618
S SG YVLLS YA+ +W++ VRK M E ++K G S I++ G +H
Sbjct: 456 KEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHE 515
Query: 619 FFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPENS 654
FF G+ SHPQ ++IY L + + +R GY P+ S
Sbjct: 516 FFAGDTSHPQTKQIYQQL-KVIDDRLRSIGYLPDRS 550
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 122/260 (46%), Gaps = 24/260 (9%)
Query: 116 DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMS 175
DV + ++ Y G LD AR+VFD M ER+ SW S+I R G + ALQLF +M
Sbjct: 185 DVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ 244
Query: 176 ---ERSVVTWTTMVSGFAQNGLVD-----HA--RRFFDLMPEKNTIAWTAMVKSYLDNGQ 225
E T +++S A G + HA R D+ + + ++++ Y G
Sbjct: 245 RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGS 304
Query: 226 FSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDR------NHVSWTAMV 279
++F M +R++ SWN MI G + R +EA++ F+ M D+ N V++ ++
Sbjct: 305 LRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLL 364
Query: 280 SGLAQNKMVEVARKYFDIMPFKD------MAAWSAMITAYVDEKLLGEALELFNLVPEK- 332
V R+YFD+M +D + + ++ + EA+++ +P K
Sbjct: 365 IACNHRGFVNKGRQYFDMM-VRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKP 423
Query: 333 NVGIWNTIIDGYVRNGEAGE 352
+ IW +++D + G + E
Sbjct: 424 DAVIWRSLLDACCKKGASVE 443
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 104/243 (42%), Gaps = 53/243 (21%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSER------ 115
I + G G L ARK+FDEMP+R VS+NSMI ++ + A +F+ M
Sbjct: 193 IHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGY 252
Query: 116 -----------------------------------DVVAQSAMVDGYAKAGRLDNAREVF 140
DV+ ++++++ Y K G L A +VF
Sbjct: 253 TMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVF 312
Query: 141 DNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSER------SVVTWTTMVSGFAQNGL 194
M +R+ SW ++I G+ GR EEA+ FD+M ++ + VT+ ++ G
Sbjct: 313 QGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGF 372
Query: 195 VDHARRFFDLMPEKNTIA-----WTAMVKSYLDNGQFSEGYKLFLEMPER-NVRSWNVMI 248
V+ R++FD+M I + +V G +E + + MP + + W ++
Sbjct: 373 VNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLL 432
Query: 249 SGC 251
C
Sbjct: 433 DAC 435
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 12/152 (7%)
Query: 85 DAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMT 144
D + NS+I +Y K + AE +F+ M +RD+ + +AM+ G+A GR + A FD M
Sbjct: 288 DVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMV 347
Query: 145 ER------NAFSWTSLISGYFRCGRTEEALQLFDQMS-----ERSVVTWTTMVSGFAQNG 193
++ N+ ++ L+ G + Q FD M E ++ + +V A+ G
Sbjct: 348 DKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAG 407
Query: 194 LVDHARRFFDLMPEK-NTIAWTAMVKSYLDNG 224
+ A MP K + + W +++ + G
Sbjct: 408 YITEAIDMVMSMPMKPDAVIWRSLLDACCKKG 439
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 150/498 (30%), Positives = 267/498 (53%), Gaps = 41/498 (8%)
Query: 189 FAQNGLVDHARRFFDLMP--EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNV 246
+A +G + A++ FD +P EK+ + WT ++ S+ G KLF+EM + V +V
Sbjct: 53 YASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDV 112
Query: 247 MISGCL--------------SANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVAR 292
+ CL + V + + ++ N A++ + +V +
Sbjct: 113 SVV-CLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCN-----ALMDMYGKCGLVSEVK 166
Query: 293 KYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGE 352
+ F+ + K + +W+ ++ V + L E+F+ +PE+N W ++ GY+ G E
Sbjct: 167 RIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTRE 226
Query: 353 ALRLFILMLRSCFRPC-VTTMTSIITSCDGM----------VEIMQAHAMVIHLGFEQNT 401
L L M+ C T+ S++++C V ++ M+ +
Sbjct: 227 VLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDV 286
Query: 402 WVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTS 461
V AL+ +Y+K G++ S+M VF L++ ++VV+W A+ A HG G + +F +M+
Sbjct: 287 MVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE 346
Query: 462 GTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNE 521
KPD++TF +LSACSH+G+V++G R F S++ Y L KV+HY+C+VD+LGRAGL+ E
Sbjct: 347 -VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLR-FYGLEPKVDHYACMVDLLGRAGLIEE 404
Query: 522 AMDVVS--TIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNA 579
A ++ +PP+E+ VL +LLG+C +HG +++A I ++L+ + P ++ +L+SN
Sbjct: 405 AEILMREMPVPPNEV---VLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNM 461
Query: 580 YAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQS 639
Y AE + D +R ++++ ++KI G S I V H F G+RSHP+ +EIY L +
Sbjct: 462 YVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEV 521
Query: 640 LQPLMRETGYTPENSLLI 657
++ + R GY P+ S L+
Sbjct: 522 IERI-RSAGYVPDVSGLV 538
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 181/438 (41%), Gaps = 71/438 (16%)
Query: 69 GKLKEARKLFDEMP--QRDAVSYNSMIAVYLKNKDVHGAETIFKAMSER----DVVAQSA 122
G++ A+KLFDE+P ++D V + ++++ + + + + +F M + D V+
Sbjct: 57 GEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVC 116
Query: 123 MVDGYAKAGRLDNAREVFDNMTERNAFS----WTSLISGYFRCGRTEEALQLFDQMSERS 178
+ AK L A++ + + +L+ Y +CG E ++F+++ E+S
Sbjct: 117 LFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKS 176
Query: 179 VVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPE 238
VV+WT ++ + ++ R F MPE+N +AWT MV YL G E +L EM
Sbjct: 177 VVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVF 236
Query: 239 R-----NVRSWNVMISGCLSANR--VDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVA 291
R N + M+S C + V +H++ L + M+
Sbjct: 237 RCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVY----------------ALKKEMMMGEE 280
Query: 292 RKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAG 351
Y D+M +A++ Y + ++ +F L+ ++NV WN + G +G+
Sbjct: 281 ASYDDVM------VGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGR 334
Query: 352 EALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLY 411
+ +F M+R +P T T+++++C H G W
Sbjct: 335 MVIDMFPQMIRE-VKPDDLTFTAVLSACS-------------HSGIVDEGW--------- 371
Query: 412 SKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFV 471
C L F L+ K V + M+ G A ++ R + P+E+
Sbjct: 372 -----RCFHSLRFYGLEPK-VDHYACMVDLLGRAGLIEEA-EILMREMP--VPPNEVVLG 422
Query: 472 GLLSACSHAGLVNQGRRV 489
LL +CS G V R+
Sbjct: 423 SLLGSCSVHGKVEIAERI 440
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 123/272 (45%), Gaps = 29/272 (10%)
Query: 54 SLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMS 113
S++ N + + G+ G + E +++F+E+ ++ VS+ ++ +K + + +F M
Sbjct: 145 SVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMP 204
Query: 114 ERDVVAQSAMVDGYAKAGRLDNAREVFDNMTER--NAFSWTSLISGYFRCGRT------- 164
ER+ VA + MV GY AG E+ M R + ++ +L S C ++
Sbjct: 205 ERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGR 264
Query: 165 -------EEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMV 217
++ + + ++ S V+ T +V +A+ G +D + F LM ++N + W A+
Sbjct: 265 WVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALF 324
Query: 218 KSYLDNGQFSEGYKLFLEMPERNVR----SWNVMISGCLSANRVDEAIHLFETM------ 267
+G+ +F +M R V+ ++ ++S C + VDE F ++
Sbjct: 325 SGLAMHGKGRMVIDMFPQMI-REVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLE 383
Query: 268 PDRNHVSWTAMVSGLAQNKMVEVARKYFDIMP 299
P +H + MV L + ++E A MP
Sbjct: 384 PKVDH--YACMVDLLGRAGLIEEAEILMREMP 413
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 142/359 (39%), Gaps = 59/359 (16%)
Query: 282 LAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVP--EKNVGIWNT 339
L + + + R Y F+ A+ M+TA +LF+ +P EK+ W T
Sbjct: 32 LTTSGLKKAPRSYLSNALFQFYASSGEMVTAQ----------KLFDEIPLSEKDNVDWTT 81
Query: 340 IIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI---MQAHAMVIHLG 396
++ + R G +++LF+ M R ++ + C + ++ Q H + + +G
Sbjct: 82 LLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMG 141
Query: 397 FEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVS---------------------- 434
+ V NAL+ +Y K G + +FE L+ K VVS
Sbjct: 142 VLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFH 201
Query: 435 ---------WTAMIVAYANHGHGHHALQVFARMV-TSGTKPDEITFVGLLSACSHAGLVN 484
WT M+ Y G L++ A MV G + +T +LSAC+ +G +
Sbjct: 202 EMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLV 261
Query: 485 QGRRVF------DSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAV 538
GR V + + G V + LVDM + G ++ +M+V + +
Sbjct: 262 VGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNV--VT 319
Query: 539 LVALLGACKLHGNIK-VANSIGQKLLSLEP---TSSGGYVLLSNAYAAEEQWDEFAQVR 593
AL +HG + V + Q + ++P T + S++ +E W F +R
Sbjct: 320 WNALFSGLAMHGKGRMVIDMFPQMIREVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLR 378
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 78/142 (54%), Gaps = 11/142 (7%)
Query: 387 QAHAMVIHLGFEQ--NTWVTNALITLYSKSGDLCSAMLVFE--LLKSKDVVSWTAMIVAY 442
+ HA++ G ++ ++++NAL Y+ SG++ +A +F+ L KD V WT ++ ++
Sbjct: 27 ELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSF 86
Query: 443 ANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSH---AGLVNQGRRVFDSIKGAYNL 499
+ +G +++++F M + D+++ V L C+ G QG V ++K
Sbjct: 87 SRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGV--AVKMGVLT 144
Query: 500 NLKVEHYSCLVDMLGRAGLVNE 521
++KV + L+DM G+ GLV+E
Sbjct: 145 SVKV--CNALMDMYGKCGLVSE 164
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 168/583 (28%), Positives = 278/583 (47%), Gaps = 43/583 (7%)
Query: 85 DAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNM- 143
DA NS+I +Y+K ++ A +F M ER+VV+ AM+ GY +G ++F +M
Sbjct: 68 DAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMF 127
Query: 144 ----TERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVV-------TWTTMVSGFAQN 192
+ N F T + GR EE Q + ++ T M S + N
Sbjct: 128 FSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGN 187
Query: 193 GLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCL 252
G A R D +P + +++ + YL+ G F EG + + + WN + L
Sbjct: 188 G---EAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDF-VWNNLTY--L 241
Query: 253 SANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITA 312
S+ R LF + D N LA + R F+ ++ A A+I
Sbjct: 242 SSLR------LFSNLRDLN----------LALQVHSRMVRFGFN----AEVEACGALINM 281
Query: 313 YVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTM 372
Y + A +F+ +N+ + TI+D Y ++ EAL LF M P T
Sbjct: 282 YGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTF 341
Query: 373 TSIITSCDGMVEIMQA---HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKS 429
++ S + + Q H +V+ G+ + V NAL+ +Y+KSG + A F +
Sbjct: 342 AILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTF 401
Query: 430 KDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRV 489
+D+V+W MI ++HG G AL+ F RM+ +G P+ ITF+G+L ACSH G V QG
Sbjct: 402 RDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHY 461
Query: 490 FDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLH 549
F+ + +++ ++HY+C+V +L +AG+ +A D + T P E D LL AC +
Sbjct: 462 FNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRT-APIEWDVVAWRTLLNACYVR 520
Query: 550 GNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQ 609
N ++ + + + P SG YVLLSN +A +W+ A+VR M + VKK G S
Sbjct: 521 RNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSW 580
Query: 610 IQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPE 652
I ++ + H+F + HP++ IY +++ + + + GY+P+
Sbjct: 581 IGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKI-KPLGYSPD 622
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 146/360 (40%), Gaps = 69/360 (19%)
Query: 49 ISHDWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETI 108
ISH++ RN + + EA ++ D++P D ++S ++ YL+ +
Sbjct: 168 ISHEFV---RNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDV 224
Query: 109 FKAMSERDVV---------------------------------------AQSAMVDGYAK 129
+ + D V A A+++ Y K
Sbjct: 225 LRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGK 284
Query: 130 AGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTM 185
G++ A+ VFD+ +N F T+++ YF+ EEAL LF +M + V T+ +
Sbjct: 285 CGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAIL 344
Query: 186 VSGFAQNGLVDHARRFFDLMPE----KNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNV 241
++ A+ L+ L+ + + + A+V Y +G + K F M R++
Sbjct: 345 LNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDI 404
Query: 242 RSWNVMISGCLSANRVDEAIHLFETM------PDRNHVSWTAMVSGLAQNKMVEVARKY- 294
+WN MISGC EA+ F+ M P+R +++ ++ + VE Y
Sbjct: 405 VTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNR--ITFIGVLQACSHIGFVEQGLHYF 462
Query: 295 ------FDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVP-EKNVGIWNTIIDG-YVR 346
FD+ P D+ ++ ++ + +A + P E +V W T+++ YVR
Sbjct: 463 NQLMKKFDVQP--DIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVR 520
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 134/342 (39%), Gaps = 89/342 (26%)
Query: 74 ARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAM-----SERDVVAQSAMVDGYA 128
ARKLFD MP+R+ VS+ +M+ Y + +FK+M S + + + +
Sbjct: 88 ARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCS 147
Query: 129 KAGRLDNARE-----------------------------------VFDNMTERNAFSWTS 153
+GR++ ++ V D++ + ++S
Sbjct: 148 NSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSS 207
Query: 154 LISGYFRCGRTEEALQLFDQMSERSVVTWTT----------------------------- 184
+SGY CG +E L + + + V W
Sbjct: 208 ALSGYLECGAFKEGLDVLRKTANEDFV-WNNLTYLSSLRLFSNLRDLNLALQVHSRMVRF 266
Query: 185 -----------MVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLF 233
+++ + + G V +A+R FD +N T ++ +Y + F E LF
Sbjct: 267 GFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLF 326
Query: 234 LEMPERNV----RSWNVMISGC--LSANRVDEAIH-LFETMPDRNHV-SWTAMVSGLAQN 285
+M + V ++ ++++ LS + + +H L RNHV A+V+ A++
Sbjct: 327 SKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKS 386
Query: 286 KMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFN 327
+E ARK F M F+D+ W+ MI+ L EALE F+
Sbjct: 387 GSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFD 428
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/352 (35%), Positives = 213/352 (60%), Gaps = 6/352 (1%)
Query: 307 SAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFR 366
++++ Y + + A ++F+ +PEK++ WN++I+G+ NG+ EAL L+ M +
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 367 PCVTTMTSIITSCDGMVEIM---QAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLV 423
P T+ S++++C + + + H +I +G +N +N L+ LY++ G + A +
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 424 FELLKSKDVVSWTAMIVAYANHGHGHHALQVFARM-VTSGTKPDEITFVGLLSACSHAGL 482
F+ + K+ VSWT++IV A +G G A+++F M T G P EITFVG+L ACSH G+
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 483 VNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVAL 542
V +G F ++ Y + ++EH+ C+VD+L RAG V +A + + ++P + + + L
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP-MQPNVVIWRTL 265
Query: 543 LGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVK 602
LGAC +HG+ +A ++L LEP SG YVLLSN YA+E++W + ++RK+M VK
Sbjct: 266 LGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVK 325
Query: 603 KISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPENS 654
K+ G S ++V + H F +G++SHPQ + IY L++ + +R GY P+ S
Sbjct: 326 KVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKE-MTGRLRSEGYVPQIS 376
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 112/246 (45%), Gaps = 22/246 (8%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQS----AMV 124
G + A K+FD+MP++D V++NS+I + +N A ++ M+ + + +++
Sbjct: 37 GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLL 96
Query: 125 DGYAKAGRLDNAREVFDNMTE----RNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVV 180
AK G L + V M + RN S L+ Y RCGR EEA LFD+M +++ V
Sbjct: 97 SACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSV 156
Query: 181 TWTTMVSGFAQNGLVDHARRFFDLMPEKN-----TIAWTAMVKSYLDNGQFSEGYKLFLE 235
+WT+++ G A NG A F M I + ++ + G EG++ F
Sbjct: 157 SWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRR 216
Query: 236 MPER-----NVRSWNVMISGCLSANRVDEAIHLFETMP-DRNHVSWTAMVSGL---AQNK 286
M E + + M+ A +V +A ++MP N V W ++ +
Sbjct: 217 MREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD 276
Query: 287 MVEVAR 292
+ E AR
Sbjct: 277 LAEFAR 282
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 76/135 (56%), Gaps = 3/135 (2%)
Query: 389 HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHG 448
H++VI GF +V N+L+ LY+ GD+ SA VF+ + KD+V+W ++I +A +G
Sbjct: 11 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 70
Query: 449 HHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRV-FDSIKGAYNLNLKVEHYS 507
AL ++ M + G KPD T V LLSAC+ G + G+RV IK NL +
Sbjct: 71 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS--N 128
Query: 508 CLVDMLGRAGLVNEA 522
L+D+ R G V EA
Sbjct: 129 VLLDLYARCGRVEEA 143
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 125/266 (46%), Gaps = 21/266 (7%)
Query: 117 VVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSE 176
+ Q++++ YA G + +A +VFD M E++ +W S+I+G+ G+ EEAL L+ +M+
Sbjct: 23 IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS 82
Query: 177 RSV----VTWTTMVSGFAQNGLVDHARRFFDLMPE----KNTIAWTAMVKSYLDNGQFSE 228
+ + T +++S A+ G + +R M + +N + ++ Y G+ E
Sbjct: 83 KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEE 142
Query: 229 GYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRN-----HVSWTAMVSGLA 283
LF EM ++N SW +I G EAI LF+ M +++ ++ +
Sbjct: 143 AKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS 202
Query: 284 QNKMVEVARKYFDIM--PFK---DMAAWSAMITAYVDEKLLGEALELFNLVP-EKNVGIW 337
MV+ +YF M +K + + M+ + +A E +P + NV IW
Sbjct: 203 HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIW 262
Query: 338 NTIIDGYVRNGEA--GEALRLFILML 361
T++ +G++ E R+ IL L
Sbjct: 263 RTLLGACTVHGDSDLAEFARIQILQL 288
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 161/581 (27%), Positives = 280/581 (48%), Gaps = 69/581 (11%)
Query: 121 SAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLF--------- 171
S ++ Y + R A VFD +T RNAFS+ +L+ Y +A LF
Sbjct: 61 SKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCY 120
Query: 172 -------DQMS--------------------------------ERSVVTWTTMVSGFAQN 192
D +S + V M++ + +
Sbjct: 121 SSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKC 180
Query: 193 GLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMP-----ERNVRSWNVM 247
++ AR+ FD M E++ ++W +M+ Y +G F + K++ M + N + +
Sbjct: 181 DNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISV 240
Query: 248 ISGCLSANRVDEAIHLFETMPDRNHVSW-----TAMVSGLAQNKMVEVARKYFDIMPFKD 302
C ++ + + + + M + NH+ A++ A+ ++ AR FD M KD
Sbjct: 241 FQACGQSSDLIFGLEVHKKMIE-NHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKD 299
Query: 303 MAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLR 362
+ A+I+ Y+ L+ EA+ LF+ + + WN +I G ++N E + F M+R
Sbjct: 300 SVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIR 359
Query: 363 SCFRPCVTTMTSIITSC------DGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGD 416
RP T++S++ S G EI HA I G + N +VT ++I Y+K G
Sbjct: 360 CGSRPNTVTLSSLLPSLTYSSNLKGGKEI---HAFAIRNGADNNIYVTTSIIDNYAKLGF 416
Query: 417 LCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSA 476
L A VF+ K + +++WTA+I AYA HG A +F +M GTKPD++T +LSA
Sbjct: 417 LLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSA 476
Query: 477 CSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDE 536
+H+G + + +FDS+ Y++ VEHY+C+V +L RAG +++AM+ +S +P I +
Sbjct: 477 FAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAK 536
Query: 537 AVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRM 596
V ALL + G++++A +L +EP ++G Y +++N Y +W+E VR +M
Sbjct: 537 -VWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKM 595
Query: 597 KEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQ 637
K +KKI G S I+ + F + S + +E+Y ++
Sbjct: 596 KRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIE 636
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 177/353 (50%), Gaps = 21/353 (5%)
Query: 90 NSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAF 149
N MI Y K ++ A +F MSERDVV+ ++M+ GY+++G ++ ++++ M + F
Sbjct: 171 NGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDF 230
Query: 150 --SWTSLISGYFRCGRTEE---ALQLFDQMSERSV---VTWTTMVSGF-AQNGLVDHARR 200
+ ++IS + CG++ + L++ +M E + ++ V GF A+ G +D+AR
Sbjct: 231 KPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARA 290
Query: 201 FFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEA 260
FD M EK+++ + A++ Y+ +G E LF EM + +WN MISG + N +E
Sbjct: 291 LFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEV 350
Query: 261 IHLFETM----PDRNHVSWTAMVSGLAQNKMVEVARKY--FDIMPFKDMAAW--SAMITA 312
I+ F M N V+ ++++ L + ++ ++ F I D + +++I
Sbjct: 351 INSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDN 410
Query: 313 YVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTM 372
Y L A +F+ ++++ W II Y +G++ A LF M +P T+
Sbjct: 411 YAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTL 470
Query: 373 TSIITSC--DGMVEIMQA--HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAM 421
T+++++ G ++ Q +M+ E ++++ S++G L AM
Sbjct: 471 TAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAM 523
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 158/376 (42%), Gaps = 93/376 (24%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAM------ 112
N IT + ++ ARK+FDEM +RD VS+NSMI+ Y ++ + ++KAM
Sbjct: 171 NGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDF 230
Query: 113 ----------------------------------SERDVVAQSAMVDGYAKAGRLDNARE 138
+ D+ +A++ YAK G LD AR
Sbjct: 231 KPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARA 290
Query: 139 VFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNG----L 194
+FD M+E+++ ++ ++ISGY G +EA+ LF +M + TW M+SG QN +
Sbjct: 291 LFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEV 350
Query: 195 VDHARRFF------------DLMP-----------------------EKNTIAWTAMVKS 219
++ R L+P + N T+++ +
Sbjct: 351 INSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDN 410
Query: 220 YLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM------PDRNHV 273
Y G ++F +R++ +W +I+ D A LF+ M PD V
Sbjct: 411 YAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPD--DV 468
Query: 274 SWTAMVSGLAQNKMVEVARKYFDIMPFK-----DMAAWSAMITAYVDEKLLGEALELFNL 328
+ TA++S A + ++A+ FD M K + ++ M++ L +A+E +
Sbjct: 469 TLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISK 528
Query: 329 VPEKNVG-IWNTIIDG 343
+P + +W +++G
Sbjct: 529 MPIDPIAKVWGALLNG 544
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 133/285 (46%), Gaps = 20/285 (7%)
Query: 295 FDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEAL 354
F I P +A S +I+ Y + +AL +F+ + +N +N ++ Y +A
Sbjct: 51 FSIKPDNFLA--SKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAF 108
Query: 355 RLFILML-RSCF-----RPCVTTMTSIITSCDGMVEI------MQAHAMVIHLGFEQNTW 402
LF+ + SC+ RP +++ ++ + G + Q H VI GF+ + +
Sbjct: 109 SLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVF 168
Query: 403 VTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVF-ARMVTS 461
V N +IT Y+K ++ SA VF+ + +DVVSW +MI Y+ G +++ A + S
Sbjct: 169 VGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACS 228
Query: 462 GTKPDEITFVGLLSACSHAGLVNQGRRVFDS-IKGAYNLNLKVEHYSCLVDMLGRAGLVN 520
KP+ +T + + AC + + G V I+ ++L + + ++ + G ++
Sbjct: 229 DFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSL--CNAVIGFYAKCGSLD 286
Query: 521 EAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSL 565
A + + SE D A++ HG +K A ++ ++ S+
Sbjct: 287 YARALFDEM--SEKDSVTYGAIISGYMAHGLVKEAMALFSEMESI 329
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 146/449 (32%), Positives = 235/449 (52%), Gaps = 23/449 (5%)
Query: 226 FSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM----PDRNHVSWTAMV-- 279
+ K+ EMPE+NV SW MIS EA+ +F M N ++ ++
Sbjct: 103 LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTS 162
Query: 280 ----SGLAQNKMVE--VARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKN 333
SGL K + + + +D F S+++ Y + EA E+F +PE++
Sbjct: 163 CIRASGLGLGKQIHGLIVKWNYDSHIF----VGSSLLDMYAKAGQIKEAREIFECLPERD 218
Query: 334 VGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI---MQAHA 390
V II GY + G EAL +F + P T S++T+ G+ + QAH
Sbjct: 219 VVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHC 278
Query: 391 MVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHH 450
V+ + N+LI +YSK G+L A +F+ + + +SW AM+V Y+ HG G
Sbjct: 279 HVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGRE 338
Query: 451 ALQVFARMVTSG-TKPDEITFVGLLSACSHAGLVNQGRRVFDS-IKGAYNLNLKVEHYSC 508
L++F M KPD +T + +LS CSH + + G +FD + G Y EHY C
Sbjct: 339 VLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGC 398
Query: 509 LVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPT 568
+VDMLGRAG ++EA + + +P S+ VL +LLGAC++H ++ + S+G++L+ +EP
Sbjct: 399 IVDMLGRAGRIDEAFEFIKRMP-SKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPE 457
Query: 569 SSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQ 628
++G YV+LSN YA+ +W + VR M +K V K G S IQ + H F +R+HP+
Sbjct: 458 NAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPR 517
Query: 629 VEEIYGFLQQSLQPLMRETGYTPENSLLI 657
EE+ +++ + M++ GY P+ S ++
Sbjct: 518 REEVLAKMKE-ISIKMKQAGYVPDLSCVL 545
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 131/285 (45%), Gaps = 52/285 (18%)
Query: 66 GRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERD--------- 116
G+ L++ARK+ DEMP+++ VS+ +MI+ Y + A T+F M D
Sbjct: 98 GKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFA 157
Query: 117 ------------------------------VVAQSAMVDGYAKAGRLDNAREVFDNMTER 146
+ S+++D YAKAG++ ARE+F+ + ER
Sbjct: 158 TVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPER 217
Query: 147 NAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHARRFF 202
+ S T++I+GY + G EEAL++F ++ + VT+ ++++ + L+DH ++
Sbjct: 218 DVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAH 277
Query: 203 DLMPEKNTIAWTAMVKSYLD----NGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVD 258
+ + + + S +D G S +LF MPER SWN M+ G
Sbjct: 278 CHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGR 337
Query: 259 EAIHLFETMPDR-----NHVSWTAMVSGLAQNKMVEVARKYFDIM 298
E + LF M D + V+ A++SG + +M + FD M
Sbjct: 338 EVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGM 382
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 176/369 (47%), Gaps = 28/369 (7%)
Query: 36 IFRFLRNFTASISISHDWSLRKRNVEITILGRRGKLKEARKLFDEM----PQRDAVSYNS 91
+F +R S S S + + + I+ L G+L+EA EM P+ Y++
Sbjct: 1 MFNLMRLIHRSFSSSPTNYVLQTILPISQLCSNGRLQEA---LLEMAMLGPEMGFHGYDA 57
Query: 92 MIAVYLKNKDVHGAETIFKAMSERDVVA----QSAMVDGYAKAGRLDNAREVFDNMTERN 147
++ L + + + + M + + ++ ++ Y K L++AR+V D M E+N
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 148 AFSWTSLISGYFRCGRTEEALQLFDQM----SERSVVTWTTMVSGFAQNGLVDHARRFFD 203
SWT++IS Y + G + EAL +F +M + + T+ T+++ + + ++
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHG 177
Query: 204 LMPEKN----TIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDE 259
L+ + N ++++ Y GQ E ++F +PER+V S +I+G +E
Sbjct: 178 LIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEE 237
Query: 260 AIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWS----AMIT 311
A+ +F + N+V++ ++++ L+ +++ ++ + +++ ++ ++I
Sbjct: 238 ALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLID 297
Query: 312 AYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILML-RSCFRPCVT 370
Y L A LF+ +PE+ WN ++ GY ++G E L LF LM +P
Sbjct: 298 MYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAV 357
Query: 371 TMTSIITSC 379
T+ ++++ C
Sbjct: 358 TLLAVLSGC 366
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 79/148 (53%), Gaps = 1/148 (0%)
Query: 387 QAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHG 446
+ HA +I + T++ L+ Y K L A V + + K+VVSWTAMI Y+ G
Sbjct: 73 RVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTG 132
Query: 447 HGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHY 506
H AL VFA M+ S KP+E TF +L++C A + G+++ I +N + +
Sbjct: 133 HSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIV-KWNYDSHIFVG 191
Query: 507 SCLVDMLGRAGLVNEAMDVVSTIPPSEI 534
S L+DM +AG + EA ++ +P ++
Sbjct: 192 SSLLDMYAKAGQIKEAREIFECLPERDV 219
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 111/259 (42%), Gaps = 53/259 (20%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLK-NKDVHGAETIFKAMSE------ 114
+ + + G++KEAR++F+ +P+RD VS ++IA Y + D E + SE
Sbjct: 195 LDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNY 254
Query: 115 ----------------------------RDV----VAQSAMVDGYAKAGRLDNAREVFDN 142
R++ V Q++++D Y+K G L AR +FDN
Sbjct: 255 VTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDN 314
Query: 143 MTERNAFSWTSLISGYFRCGRTEEALQLFDQMSER-----SVVTWTTMVSGFAQNGLVDH 197
M ER A SW +++ GY + G E L+LF M + VT ++SG + + D
Sbjct: 315 MPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDT 374
Query: 198 ARRFFDLM------PEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGC 251
FD M + T + +V G+ E ++ MP + ++
Sbjct: 375 GLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAG---VLGSL 431
Query: 252 LSANRVDEAIHLFETMPDR 270
L A RV ++ + E++ R
Sbjct: 432 LGACRVHLSVDIGESVGRR 450
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 22/208 (10%)
Query: 58 RNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSER-- 115
+N I + + G L AR+LFD MP+R A+S+N+M+ Y K+ +F+ M +
Sbjct: 292 QNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKR 351
Query: 116 ---DVVAQSAMVDGYAKAGRLDNAREVFDNM------TERNAFSWTSLISGYFRCGRTEE 166
D V A++ G + D +FD M T+ + ++ R GR +E
Sbjct: 352 VKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDE 411
Query: 167 ALQLFDQMSERSVVTWTTMVSGFAQNGL-VDH----ARRFFDLMPEKNTIAWTAMVKSYL 221
A + +M + + G + L VD RR ++ PE N + + Y
Sbjct: 412 AFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPE-NAGNYVILSNLYA 470
Query: 222 DNGQFSEGYKLFLEMPERNV-----RSW 244
G++++ + M ++ V RSW
Sbjct: 471 SAGRWADVNNVRAMMMQKAVTKEPGRSW 498
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 147/483 (30%), Positives = 256/483 (53%), Gaps = 30/483 (6%)
Query: 176 ERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLE 235
E V+ T S + +G VD+A +F + + W +++ + ++ + ++++
Sbjct: 39 EEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQ 98
Query: 236 M------PERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVE 289
M P+ + + S LS ++ ++H ++ + W + N ++
Sbjct: 99 MLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVV---KSGLEWDLFIC----NTLIH 151
Query: 290 V---------ARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTI 340
+ ARK FD MP K++ W++++ AY + A +F+ + E++V W+++
Sbjct: 152 MYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSM 211
Query: 341 IDGYVRNGEAGEALRLFILMLR-SCFRPCVTTMTSIITSCDGMVEIMQA---HAMVIHLG 396
IDGYV+ GE +AL +F M+R + TM S+I +C + + + H ++ +
Sbjct: 212 IDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVH 271
Query: 397 FEQNTWVTNALITLYSKSGDLCSAMLVF--ELLKSKDVVSWTAMIVAYANHGHGHHALQV 454
+ +LI +Y+K G + A VF +K D + W A+I A+HG +LQ+
Sbjct: 272 LPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQL 331
Query: 455 FARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLG 514
F +M S PDEITF+ LL+ACSH GLV + F S+K + K EHY+C+VD+L
Sbjct: 332 FHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES-GAEPKSEHYACMVDVLS 390
Query: 515 RAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYV 574
RAGLV +A D +S +P ++L ALL C HGN+++A ++G+KL+ L+P + G YV
Sbjct: 391 RAGLVKDAHDFISEMPIKPTG-SMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYV 449
Query: 575 LLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYG 634
L+N YA +Q+ +R+ M++K VKKI+G S + + G H F +++H ++IY
Sbjct: 450 GLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYA 509
Query: 635 FLQ 637
LQ
Sbjct: 510 VLQ 512
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 144/303 (47%), Gaps = 28/303 (9%)
Query: 52 DWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKA 111
+W L N I + G ARKLFDEMP ++ V++NS++ Y K+ DV A +F
Sbjct: 140 EWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDE 199
Query: 112 MSERDVVAQSAMVDGYAKAGRLDNAREVFDNM-----TERNAFSWTSLIS-----GYFRC 161
MSERDVV S+M+DGY K G + A E+FD M ++ N + S+I G
Sbjct: 200 MSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNR 259
Query: 162 GRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFF--DLMPEKNTIAWTAMVKS 219
G+T + D +V+ T+++ +A+ G + A F + E + + W A++
Sbjct: 260 GKTVHRY-ILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGG 318
Query: 220 YLDNGQFSEGYKLFLEMPERNVR----SWNVMISGCLSANRVDEAIHLFETM------PD 269
+G E +LF +M E + ++ +++ C V EA H F+++ P
Sbjct: 319 LASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPK 378
Query: 270 RNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLV 329
H + MV L++ +V+ A + MP K +M+ A ++ + LEL V
Sbjct: 379 SEH--YACMVDVLSRAGLVKDAHDFISEMPIKPTG---SMLGALLNGCINHGNLELAETV 433
Query: 330 PEK 332
+K
Sbjct: 434 GKK 436
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 129/307 (42%), Gaps = 57/307 (18%)
Query: 97 LKNKDVHGAE--TIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSL 154
L N+ + G+ ++ K+ E D+ + ++ Y +AR++FD M +N +W S+
Sbjct: 121 LSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSI 180
Query: 155 ISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNT---- 210
+ Y + G A +FD+MSER VVTW++M+ G+ + G + A FD M +
Sbjct: 181 LDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKAN 240
Query: 211 ------------------------------------IAWTAMVKSYLDNGQFSEGYKLFL 234
I T+++ Y G + + +F
Sbjct: 241 EVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFY 300
Query: 235 --EMPERNVRSWNVMISGCLSANRVDEAIHLFETMP----DRNHVSWTAMVSGLAQNKMV 288
+ E + WN +I G S + E++ LF M D + +++ +++ + +V
Sbjct: 301 RASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLV 360
Query: 289 EVARKYFDIMPFKDMAA------WSAMITAYVDEKLLGEALELFNLVPEKNVG-IWNTII 341
+ A +F K+ A ++ M+ L+ +A + + +P K G + ++
Sbjct: 361 KEAWHFFK--SLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALL 418
Query: 342 DGYVRNG 348
+G + +G
Sbjct: 419 NGCINHG 425
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 156/538 (28%), Positives = 269/538 (50%), Gaps = 55/538 (10%)
Query: 127 YAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMV 186
Y K+G + NA ++FD++ ++N +W + G F+ G AL LFD+M ER VV+W TM+
Sbjct: 49 YFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMI 108
Query: 187 SGFAQNGLVDHA-RRFFDL------------------------------------MPEKN 209
SG G ++ R FFD+ + N
Sbjct: 109 SGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYN 168
Query: 210 TIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLF----- 264
+ W +++ Y G F +FL M +R+V SWN +I C + + A+ F
Sbjct: 169 LVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMRE 228
Query: 265 -ETMPDRNHVSWT-AMVSGLAQNKMVEVARKYFDIMPF-KDMAAWSAMITAYVDEKLLGE 321
E PD VS ++ S L + + A M F + A I + L +
Sbjct: 229 MEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDD 288
Query: 322 ALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDG 381
+++LF + + + + N++I Y + +ALRLFIL + RP T +S+++S +
Sbjct: 289 SVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNA 348
Query: 382 MV--EIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMI 439
++ H++VI LGF+ +T V +L+ +Y K+G + AM VF KD++ W +I
Sbjct: 349 VMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVI 408
Query: 440 VAYANHGHGHHALQVFARMVTSGT-KPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYN 498
+ A + +L +F +++ + + KPD +T +G+L AC +AG VN+G ++F S++ A+
Sbjct: 409 MGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHG 468
Query: 499 LNLKVEHYSCLVDMLGRAGLVNEAMDVVSTI---PPSEIDEAVLVALLGACKLHGNIKVA 555
+N EHY+C++++L R G++NEA D+ I P S I E +L A L G+ ++A
Sbjct: 469 VNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDL----GDTRLA 524
Query: 556 NSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVK 613
++ + +L EP SS Y++L Y +W+ ++R M E +K G S+I ++
Sbjct: 525 ETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIE 582
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 154/376 (40%), Gaps = 57/376 (15%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVV 118
NV + L + G L A LFDEMP+RD VS+N+MI+ + +F M ++
Sbjct: 74 NVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIR 133
Query: 119 AQS------AMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFD 172
A + + G + + ++ N W S++ Y R G + AL +F
Sbjct: 134 PTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFL 193
Query: 173 QMSERSVVTWTTMVSGFAQNGLVDHARRFFDLM------PEKNTIAWTAMVKSYLDNGQF 226
M +R VV+W ++ + +G + A F LM P++ T++ + S D +
Sbjct: 194 TMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICS--DLREL 251
Query: 227 SEGYKLFLEMPERNVRSWNVMISGCLS----ANRVDEAIHLFETMPDRNHVSWTAMVSGL 282
S+G + + S ++++ + NR+D+++ LF + + V +M+
Sbjct: 252 SKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSY 311
Query: 283 AQNKMVEVARKYF------DIMPFK--------------------------------DMA 304
+ + E A + F + P K D A
Sbjct: 312 SWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVMLDHGADVHSLVIKLGFDLDTA 371
Query: 305 AWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLF-ILMLRS 363
++++ Y + A+ +F K++ WNT+I G RN A E+L +F L++
Sbjct: 372 VATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQ 431
Query: 364 CFRPCVTTMTSIITSC 379
+P T+ I+ +C
Sbjct: 432 SLKPDRVTLMGILVAC 447
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 81/200 (40%), Gaps = 40/200 (20%)
Query: 389 HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSK------------------ 430
HA ++ GF + T+ N + LY KSG + +A+ +F+ + K
Sbjct: 27 HAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYL 86
Query: 431 -------------DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGL--LS 475
DVVSW MI + G + ++VF M +P E TF L L
Sbjct: 87 NNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLV 146
Query: 476 ACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEID 535
C G G + G NL V ++ ++DM R G+ + A+ V T+ ++
Sbjct: 147 TCVRHGEQIHGNAI---CSGVSRYNLVV--WNSVMDMYRRLGVFDYALSVFLTMEDRDV- 200
Query: 536 EAVLVALLGACKLHGNIKVA 555
L+ +C GN +VA
Sbjct: 201 -VSWNCLILSCSDSGNKEVA 219
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 155/528 (29%), Positives = 267/528 (50%), Gaps = 29/528 (5%)
Query: 109 FKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEAL 168
KA ++ D V ++++ YAK R R+VFD M R+ S+ S+I+ + G EA+
Sbjct: 74 LKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAM 133
Query: 169 QLFDQM--------SE--RSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVK 218
+L +M SE S++ T + ++ + HA D +++ + TA+V
Sbjct: 134 KLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVD 193
Query: 219 SYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRN----HVS 274
YL + + +F +M +N SW MISGC++ + + LF M N V+
Sbjct: 194 MYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVT 253
Query: 275 WTAMVSGLAQNKMVEVARKYFDIMPFK-----DMAAWSAMITAYVDEKLLGEALELFNLV 329
+++ + K F+ D +A +T Y + + LF
Sbjct: 254 LLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETS 313
Query: 330 PEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQA- 388
++V +W+++I GY G+ E + L M + T+ +I+++C + A
Sbjct: 314 KVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFAS 373
Query: 389 --HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHG 446
H+ ++ GF + + NALI +Y+K G L +A VF L KD+VSW++MI AY HG
Sbjct: 374 TVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHG 433
Query: 447 HGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHY 506
HG AL++F M+ G + D++ F+ +LSAC+HAGLV + + +F G Y++ + +EHY
Sbjct: 434 HGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQ-AGKYHMPVTLEHY 492
Query: 507 SCLVDMLGRAGLVNEAMDVVSTIP--PSEIDEAVLVALLGACKLHGNIKVANS-IGQKLL 563
+C +++LGR G +++A +V +P PS + +LL AC+ HG + VA I +L+
Sbjct: 493 ACYINLLGRFGKIDDAFEVTINMPMKPS---ARIWSSLLSACETHGRLDVAGKIIANELM 549
Query: 564 SLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQ 611
EP + YVLLS + + +VR+ M+ + + K GFS+I+
Sbjct: 550 KSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 110/482 (22%), Positives = 194/482 (40%), Gaps = 69/482 (14%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVV 118
N I++ + + RK+FDEM RD VSY S+I ++ ++ A + K M +
Sbjct: 86 NSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFI 145
Query: 119 AQSAMVDGY----------AKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEAL 168
+S +V +K R+ +A + D + + T+L+ Y + A
Sbjct: 146 PKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAF 205
Query: 169 QLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFF------DLMPEKNTIA---------- 212
+FDQM ++ V+WT M+SG N + F +L P + T+
Sbjct: 206 HVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELN 265
Query: 213 -WTAMVKS-----------------------YLDNGQFSEGYKLFLEMPERNVRSWNVMI 248
+++VK Y G S LF R+V W+ MI
Sbjct: 266 YGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMI 325
Query: 249 SGCLSANRVDEAIHLFETMP----DRNHVSWTAMVSGLAQNKMVEVARK-YFDIMPFKDM 303
SG E ++L M + N V+ A+VS + ++ A + I+ M
Sbjct: 326 SGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFM 385
Query: 304 A---AWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILM 360
+ +A+I Y L A E+F + EK++ W+++I+ Y +G EAL +F M
Sbjct: 386 SHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGM 445
Query: 361 LRSCFRPCVTTMTSIITSCD--GMVE-----IMQAHAMVIHLGFEQNTWVTNALITLYSK 413
++ +I+++C+ G+VE QA + + E N L+ + K
Sbjct: 446 IKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYIN-LLGRFGK 504
Query: 414 SGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGL 473
D + + S + W++++ A HG A ++ A + ++PD L
Sbjct: 505 IDDAFEVTINMPMKPSARI--WSSLLSACETHGRLDVAGKIIANELMK-SEPDNPANYVL 561
Query: 474 LS 475
LS
Sbjct: 562 LS 563
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 341 IDGYVRNGEAGEALRLFILMLRSCFRPCVTT-MTSIITSCDGMVEIM----QAHAMVIHL 395
+ G V + EALRL+ L + S T + S+I +C E Q H + +
Sbjct: 17 LKGLVSDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKA 76
Query: 396 GFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVF 455
G + +T V+N+LI++Y+K + VF+ + +D VS+ ++I + G + A+++
Sbjct: 77 GADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLI 136
Query: 456 ARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSI 493
M G P LL+ C+ G ++ R+F ++
Sbjct: 137 KEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHAL 174
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 239 bits (611), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 139/401 (34%), Positives = 227/401 (56%), Gaps = 13/401 (3%)
Query: 269 DRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNL 328
D++ T++++ + + A++ FD KD+ AW++++ AY L+ +A +LF+
Sbjct: 94 DKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDE 153
Query: 329 VPEKNVGIWNTIIDGYVRNGEAGEALRLFILML-----RSCFRPCVTTMTSIITSCDGMV 383
+PE+NV W+ +I+GYV G+ EAL LF M + RP TM++++++C +
Sbjct: 154 MPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLG 213
Query: 384 EIMQA---HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSK-DVVSWTAMI 439
+ Q HA + E + + ALI +Y+K G L A VF L SK DV +++AMI
Sbjct: 214 ALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMI 273
Query: 440 VAYANHGHGHHALQVFARMVTS-GTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYN 498
A +G Q+F+ M TS P+ +TFVG+L AC H GL+N+G+ F + +
Sbjct: 274 CCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFG 333
Query: 499 LNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSI 558
+ ++HY C+VD+ GR+GL+ EA ++++P E D + +LL ++ G+IK
Sbjct: 334 ITPSIQHYGCMVDLYGRSGLIKEAESFIASMP-MEPDVLIWGSLLSGSRMLGDIKTCEGA 392
Query: 559 GQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHL 618
++L+ L+P +SG YVLLSN YA +W E +R M+ K + K+ G S ++V+G H
Sbjct: 393 LKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHE 452
Query: 619 FFVGERSHPQVEEIYGFLQQSLQPLMRETGY-TPENSLLID 658
F VG+ S + E IY L + +Q L RE GY T +L+D
Sbjct: 453 FVVGDESQQESERIYAMLDEIMQRL-REAGYVTDTKEVLLD 492
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 135/286 (47%), Gaps = 25/286 (8%)
Query: 83 QRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDN 142
+D S++ +Y D+ A+ +F +D+ A +++V+ YAKAG +D+AR++FD
Sbjct: 94 DKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDE 153
Query: 143 MTERNAFSWTSLISGYFRCGRTEEALQLFDQMS---------ERSVVTWTTMVSGFAQNG 193
M ERN SW+ LI+GY CG+ +EAL LF +M + T +T++S + G
Sbjct: 154 MPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLG 213
Query: 194 LVDHAR---RFFD-LMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEM-PERNVRSWNVMI 248
++ + + D E + + TA++ Y G ++F + +++V++++ MI
Sbjct: 214 ALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMI 273
Query: 249 SGCLSANRVDEAIHLFETMP-----DRNHVSWTAMVSGLAQNKMVEVARKYFDIM----- 298
DE LF M + N V++ ++ ++ + YF +M
Sbjct: 274 CCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFG 333
Query: 299 PFKDMAAWSAMITAYVDEKLLGEALELFNLVP-EKNVGIWNTIIDG 343
+ + M+ Y L+ EA +P E +V IW +++ G
Sbjct: 334 ITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 145/313 (46%), Gaps = 38/313 (12%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYA 128
G L+ A+++FD+ +D ++NS++ Y K + A +F M ER+V++ S +++GY
Sbjct: 111 GDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYV 170
Query: 129 KAGRLDNAREVFDNM---------TERNAFSWTSLISGYFRCGRTEEALQLFDQMS---- 175
G+ A ++F M N F+ ++++S R G E+ + +
Sbjct: 171 MCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHV 230
Query: 176 ERSVVTWTTMVSGFAQNGLVDHARRFFD-LMPEKNTIAWTAMVKSYLDNGQFSEGYKLFL 234
E +V T ++ +A+ G ++ A+R F+ L +K+ A++AM+ G E ++LF
Sbjct: 231 EIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFS 290
Query: 235 EM-PERNVRSWNVMISG----CLSANRVDEAIHLFETM-------PDRNHVSWTAMVSGL 282
EM N+ +V G C+ ++E F+ M P H + MV
Sbjct: 291 EMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQH--YGCMVDLY 348
Query: 283 AQNKMVEVARKYFDIMPFK-DMAAWSAMITAYVDEKLLGE------ALELFNLVPEKNVG 335
++ +++ A + MP + D+ W ++++ ++LG+ AL+ + N G
Sbjct: 349 GRSGLIKEAESFIASMPMEPDVLIWGSLLSG---SRMLGDIKTCEGALKRLIELDPMNSG 405
Query: 336 IWNTIIDGYVRNG 348
+ + + Y + G
Sbjct: 406 AYVLLSNVYAKTG 418
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 107/248 (43%), Gaps = 56/248 (22%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMS----- 113
N + + G + +ARKLFDEMP+R+ +S++ +I Y+ A +F+ M
Sbjct: 132 NSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPN 191
Query: 114 ---------------------------------------ERDVVAQSAMVDGYAKAGRLD 134
E D+V +A++D YAK G L+
Sbjct: 192 EAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLE 251
Query: 135 NAREVFDNM-TERNAFSWTSLISGYFRCGRTEEALQLFDQMS-----ERSVVTWTTMVSG 188
A+ VF+ + ++++ +++++I G T+E QLF +M+ + VT+ ++
Sbjct: 252 RAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGA 311
Query: 189 FAQNGLVDHARRFFDLMPEKNTIA-----WTAMVKSYLDNGQFSEGYKLFLEMP-ERNVR 242
GL++ + +F +M E+ I + MV Y +G E MP E +V
Sbjct: 312 CVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVL 371
Query: 243 SWNVMISG 250
W ++SG
Sbjct: 372 IWGSLLSG 379
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 109/257 (42%), Gaps = 44/257 (17%)
Query: 336 IWNTIIDGYVRNGEAGE---ALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI---MQAH 389
+WN II V N + + + +++ M P T ++ S + + + H
Sbjct: 26 LWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTH 85
Query: 390 AMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGH 449
A ++ G +++ +V +L+ +YS GDL SA VF+ SKD+ +W +++ AYA G
Sbjct: 86 AQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLID 145
Query: 450 HALQVFARM---------------VTSG---------------------TKPDEITFVGL 473
A ++F M V G +P+E T +
Sbjct: 146 DARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTV 205
Query: 474 LSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSE 533
LSAC G + QG+ V I Y++ + + + L+DM + G + A V + + S+
Sbjct: 206 LSACGRLGALEQGKWVHAYID-KYHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL-GSK 263
Query: 534 IDEAVLVALLGACKLHG 550
D A++ ++G
Sbjct: 264 KDVKAYSAMICCLAMYG 280
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 239 bits (609), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 142/457 (31%), Positives = 240/457 (52%), Gaps = 22/457 (4%)
Query: 216 MVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM----PDRN 271
++ Y G E K+F +MP+R+ +W +ISG +R +A+ F M N
Sbjct: 101 LLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPN 160
Query: 272 HVSWTAMVSGLAQNKMVEVARKY--------FDIMPFKDMAAWSAMITAYVDEKLLGEAL 323
+ ++++ A + + FD ++ SA++ Y L+ +A
Sbjct: 161 EFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFD----SNVHVGSALLDLYTRYGLMDDAQ 216
Query: 324 ELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMV 383
+F+ + +N WN +I G+ R +AL LF MLR FRP + S+ +C
Sbjct: 217 LVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTG 276
Query: 384 EIMQA---HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIV 440
+ Q HA +I G + + N L+ +Y+KSG + A +F+ L +DVVSW +++
Sbjct: 277 FLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLT 336
Query: 441 AYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLN 500
AYA HG G A+ F M G +P+EI+F+ +L+ACSH+GL+++G ++ +K +
Sbjct: 337 AYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIV 395
Query: 501 LKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQ 560
+ HY +VD+LGRAG +N A+ + + P E A+ ALL AC++H N ++ +
Sbjct: 396 PEAWHYVTVVDLLGRAGDLNRALRFIEEM-PIEPTAAIWKALLNACRMHKNTELGAYAAE 454
Query: 561 KLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFF 620
+ L+P G +V+L N YA+ +W++ A+VRK+MKE VKK S ++++ H+F
Sbjct: 455 HVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFV 514
Query: 621 VGERSHPQVEEIYGFLQQSLQPLMRETGYTPENSLLI 657
+ HPQ EEI ++ L + +E GY P+ S +I
Sbjct: 515 ANDERHPQREEIARKWEEVLAKI-KELGYVPDTSHVI 550
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 127/257 (49%), Gaps = 16/257 (6%)
Query: 302 DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILML 361
D+ + ++ Y L EA ++F +P+++ W T+I GY ++ +AL F ML
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML 153
Query: 362 RSCFRPCVTTMTSIITS-------CDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKS 414
R + P T++S+I + C G Q H + GF+ N V +AL+ LY++
Sbjct: 154 RFGYSPNEFTLSSVIKAAAAERRGCCGH----QLHGFCVKCGFDSNVHVGSALLDLYTRY 209
Query: 415 GDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLL 474
G + A LVF+ L+S++ VSW A+I +A AL++F M+ G +P ++ L
Sbjct: 210 GLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLF 269
Query: 475 SACSHAGLVNQGRRVFDS-IKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSE 533
ACS G + QG+ V IK L + L+DM ++G +++A + + ++
Sbjct: 270 GACSSTGFLEQGKWVHAYMIKSGEKLVAFAG--NTLLDMYAKSGSIHDARKIFDRL--AK 325
Query: 534 IDEAVLVALLGACKLHG 550
D +LL A HG
Sbjct: 326 RDVVSWNSLLTAYAQHG 342
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 173/360 (48%), Gaps = 24/360 (6%)
Query: 108 IFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEA 167
I +++ D+V + +++ YAK G L+ AR+VF+ M +R+ +WT+LISGY + R +A
Sbjct: 86 ILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDA 145
Query: 168 LQLFDQM----SERSVVTWTTMVSGFA--QNGLVDHARRFFDLMP--EKNTIAWTAMVKS 219
L F+QM + T ++++ A + G H F + + N +A++
Sbjct: 146 LLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDL 205
Query: 220 YLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM------PDRNHV 273
Y G + +F + RN SWN +I+G + ++A+ LF+ M P +H
Sbjct: 206 YTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRP--SHF 263
Query: 274 SWTAMVSGLAQNKMVEVAR--KYFDIMPFKDMAAWSA--MITAYVDEKLLGEALELFNLV 329
S+ ++ + +E + + I + + A++ ++ Y + +A ++F+ +
Sbjct: 264 SYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL 323
Query: 330 PEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC--DGMV-EIM 386
+++V WN+++ Y ++G EA+ F M R RP + S++T+C G++ E
Sbjct: 324 AKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGW 383
Query: 387 QAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVS-WTAMIVAYANH 445
+ ++ G W ++ L ++GDL A+ E + + + W A++ A H
Sbjct: 384 HYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 443
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 171/391 (43%), Gaps = 96/391 (24%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAM------ 112
N + + + G L+EARK+F++MPQRD V++ ++I+ Y ++ A F M
Sbjct: 99 NTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYS 158
Query: 113 --------------SER-------------------DVVAQSAMVDGYAKAGRLDNAREV 139
+ER +V SA++D Y + G +D+A+ V
Sbjct: 159 PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLV 218
Query: 140 FDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQM------------------------- 174
FD + RN SW +LI+G+ R TE+AL+LF M
Sbjct: 219 FDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFL 278
Query: 175 ------------SERSVVTW--TTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSY 220
S +V + T++ +A++G + AR+ FD + +++ ++W +++ +Y
Sbjct: 279 EQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAY 338
Query: 221 LDNGQFSEGYKLFLEMPERNVR----SWNVMISGCLSANRVDEAIHLFETM------PDR 270
+G E F EM +R S+ +++ C + +DE H +E M P+
Sbjct: 339 AQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEA 398
Query: 271 NHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAA-WSAMITA---YVDEKLLGEALE-L 325
H + +V L + + A ++ + MP + AA W A++ A + + +L A E +
Sbjct: 399 WH--YVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHV 456
Query: 326 FNLVPEKNVGIWNTIIDGYVRNGEAGEALRL 356
F L P+ + G + + Y G +A R+
Sbjct: 457 FELDPD-DPGPHVILYNIYASGGRWNDAARV 486
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 3/142 (2%)
Query: 389 HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHG 448
HA ++ F + + N L+ +Y+K G L A VFE + +D V+WT +I Y+ H
Sbjct: 83 HAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRP 142
Query: 449 HHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFD-SIKGAYNLNLKVEHYS 507
AL F +M+ G P+E T ++ A + G ++ +K ++ N+ V S
Sbjct: 143 CDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVG--S 200
Query: 508 CLVDMLGRAGLVNEAMDVVSTI 529
L+D+ R GL+++A V +
Sbjct: 201 ALLDLYTRYGLMDDAQLVFDAL 222
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 238 bits (608), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 158/545 (28%), Positives = 272/545 (49%), Gaps = 24/545 (4%)
Query: 116 DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMS 175
D ++++ Y+K G + A VF + ++ W ++++ Y AL LF M
Sbjct: 306 DPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMR 365
Query: 176 ERSVV----TWTTMVSGFAQNGLVD-----HARRFFDLMPEKNTIAWTAMVKSYLDNGQF 226
++SV+ T + ++S + GL + HA F + +TI +A++ Y G
Sbjct: 366 QKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIE-SALLTLYSKCGCD 424
Query: 227 SEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNH---------VSWTA 277
+ Y +F M E+++ +W +ISG + EA+ +F M D + S T
Sbjct: 425 PDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTN 484
Query: 278 MVSGLAQNKM-VEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGI 336
+GL + ++V ++ S++I Y L AL++F + +N+
Sbjct: 485 ACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVA 544
Query: 337 WNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQA---HAMVI 393
WN++I Y RN ++ LF LML P ++TS++ + +++ H +
Sbjct: 545 WNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTL 604
Query: 394 HLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQ 453
LG +T + NALI +Y K G A +F+ ++ K +++W MI Y +HG AL
Sbjct: 605 RLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALS 664
Query: 454 VFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDML 513
+F M +G PD++TF+ L+SAC+H+G V +G+ +F+ +K Y + +EHY+ +VD+L
Sbjct: 665 LFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLL 724
Query: 514 GRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGY 573
GRAGL+ EA + +P E D ++ + LL A + H N+++ +KLL +EP Y
Sbjct: 725 GRAGLLEEAYSFIKAMPI-EADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTY 783
Query: 574 VLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIY 633
V L N Y +E A++ MKEK + K G S I+V + ++FF G S P EI+
Sbjct: 784 VQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIF 843
Query: 634 GFLQQ 638
L +
Sbjct: 844 NVLNR 848
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 221/463 (47%), Gaps = 38/463 (8%)
Query: 100 KDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTE-------RNAFSWT 152
K +HG+ + D +++V+ Y K G LD A +VFD ++ R+ W
Sbjct: 80 KTIHGSVVVLGW--RYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWN 137
Query: 153 SLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGLV--DHARRFFDLM- 205
S+I GYF+ R +E + F +M V + + +VS + G + ++ M
Sbjct: 138 SMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFML 197
Query: 206 ---PEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPER-NVRSWNVMISGCLSANRVDEAI 261
+ ++ TA++ Y G + +++F+E+ ++ NV WNVMI G + + ++
Sbjct: 198 RNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSL 257
Query: 262 HLFETMPDRNHV-----SWTAMVSGLAQNKMVEVARK-YFDIMPF---KDMAAWSAMITA 312
L+ + N V S+T + +Q++ R+ + D++ D +++++
Sbjct: 258 DLY-MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSM 316
Query: 313 YVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTM 372
Y ++GEA +F+ V +K + IWN ++ Y N AL LF M + P T+
Sbjct: 317 YSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTL 376
Query: 373 TSIITSCD--GMVEIMQA-HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKS 429
+++I+ C G+ ++ HA + + + + +AL+TLYSK G A LVF+ ++
Sbjct: 377 SNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEE 436
Query: 430 KDVVSWTAMIVAYANHGHGHHALQVFARMV--TSGTKPDEITFVGLLSACSHAGLVNQGR 487
KD+V+W ++I +G AL+VF M KPD + +AC+ + G
Sbjct: 437 KDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGL 496
Query: 488 RVFDS-IKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTI 529
+V S IK LN+ V S L+D+ + GL A+ V +++
Sbjct: 497 QVHGSMIKTGLVLNVFVG--SSLIDLYSKCGLPEMALKVFTSM 537
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 138/354 (38%), Gaps = 94/354 (26%)
Query: 76 KLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDN 135
+LF Q + ++++ +Y K A +FK+M E+D+VA +++ G K G+
Sbjct: 398 ELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKE 457
Query: 136 AREVFDNMTER-----------------------------------------NAFSWTSL 154
A +VF +M + N F +SL
Sbjct: 458 ALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSL 517
Query: 155 ISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLM------PEK 208
I Y +CG E AL++F MS ++V W +M+S +++N L + + F+LM P+
Sbjct: 518 IDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDS 577
Query: 209 NTIAWT---------------------------------AMVKSYLDNGQFSEGYKLFLE 235
+I A++ Y+ G +F +
Sbjct: 578 VSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKK 637
Query: 236 MPERNVRSWNVMISGCLSANRVDEAIHLFETM------PDRNHVSWTAMVSGLAQNKMVE 289
M +++ +WN+MI G S A+ LF+ M PD V++ +++S + VE
Sbjct: 638 MQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPD--DVTFLSLISACNHSGFVE 695
Query: 290 VARKYFDIMPFK-----DMAAWSAMITAYVDEKLLGEALELFNLVP-EKNVGIW 337
+ F+ M +M ++ M+ LL EA +P E + IW
Sbjct: 696 EGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIW 749
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 131/295 (44%), Gaps = 23/295 (7%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSER----DV 117
I + + G + A K+F M + V++NSMI+ Y +N + +F M + D
Sbjct: 518 IDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDS 577
Query: 118 VAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWT----SLISGYFRCGRTEEALQLFDQ 173
V+ ++++ + L + + S T +LI Y +CG ++ A +F +
Sbjct: 578 VSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKK 637
Query: 174 MSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPE----KNTIAWTAMVKSYLDNGQFSEG 229
M +S++TW M+ G+ +G A FD M + + + + +++ + +G EG
Sbjct: 638 MQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEG 697
Query: 230 YKLFLEMP-----ERNVRSWNVMISGCLSANRVDEAIHLFETMP-DRNHVSWTAMVSGLA 283
+F M E N+ + M+ A ++EA + MP + + W ++S
Sbjct: 698 KNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASR 757
Query: 284 QNKMVEV----ARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNV 334
+ VE+ A K + P + + + +I Y++ L EA +L L+ EK +
Sbjct: 758 THHNVELGILSAEKLLRMEPERG-STYVQLINLYMEAGLKNEAAKLLGLMKEKGL 811
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 16/206 (7%)
Query: 338 NTIIDGYVRNGEAGEALRLFILMLRSC-FRPCVTTMTSIITSCDGMVEIMQA---HAMVI 393
N+ I ++ GE +AL L+ S F V T S++ +C + + H V+
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVV 87
Query: 394 HLGFEQNTWVTNALITLYSKSGDLCSAMLVFE-------LLKSKDVVSWTAMIVAYANHG 446
LG+ + ++ +L+ +Y K G L A+ VF+ + ++DV W +MI Y
Sbjct: 88 VLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFR 147
Query: 447 HGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLN-LKVEH 505
+ F RM+ G +PD + ++S G N R I G N L +
Sbjct: 148 RFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEG--NFRREEGKQIHGFMLRNSLDTDS 205
Query: 506 Y--SCLVDMLGRAGLVNEAMDVVSTI 529
+ + L+DM + GL +A V I
Sbjct: 206 FLKTALIDMYFKFGLSIDAWRVFVEI 231
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 174/568 (30%), Positives = 274/568 (48%), Gaps = 51/568 (8%)
Query: 123 MVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVV-- 180
+++ Y+K ++AR V RN SWTSLISG + G AL F +M VV
Sbjct: 48 LINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPN 107
Query: 181 ------------TWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSE 228
+ V+G + L R D+ A+ K+ L + +
Sbjct: 108 DFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVF--VGCSAFDMYCKTRLRD----D 161
Query: 229 GYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLF------ETMPDRNHVSWTAMVSG- 281
KLF E+PERN+ +WN IS ++ R EAI F + P N +++ A ++
Sbjct: 162 ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHP--NSITFCAFLNAC 219
Query: 282 -------LAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNV 334
L V R FD D++ + +I Y K + + +F + KN
Sbjct: 220 SDWLHLNLGMQLHGLVLRSGFDT----DVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNA 275
Query: 335 GIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI---MQAHAM 391
W +++ YV+N E +A L++ + ++S++++C GM + HA
Sbjct: 276 VSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAH 335
Query: 392 VIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHA 451
+ E+ +V +AL+ +Y K G + + F+ + K++V+ ++I YA+ G A
Sbjct: 336 AVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMA 395
Query: 452 LQVFARMVT--SGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCL 509
L +F M G P+ +TFV LLSACS AG V G ++FDS++ Y + EHYSC+
Sbjct: 396 LALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCI 455
Query: 510 VDMLGRAGLVNEAMDVVSTIPPSEIDEAVLV--ALLGACKLHGNIKVANSIGQKLLSLEP 567
VDMLGRAG+V A + + +P I + V AL AC++HG ++ + L L+P
Sbjct: 456 VDMLGRAGMVERAYEFIKKMP---IQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDP 512
Query: 568 TSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHP 627
SG +VLLSN +AA +W E VR+ +K +KK +G+S I VK + H F +RSH
Sbjct: 513 KDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHI 572
Query: 628 QVEEIYGFLQQSLQPLMRETGYTPENSL 655
+EI L + L+ M GY P+ L
Sbjct: 573 LNKEIQTTLAK-LRNEMEAAGYKPDLKL 599
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 123/268 (45%), Gaps = 45/268 (16%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQ- 120
I G+ +++ + +F EM ++AVS+ S++A Y++N + A ++ S +D+V
Sbjct: 251 IDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLY-LRSRKDIVETS 309
Query: 121 ----SAMVDGYAKAGRLDNAREVFDN----MTERNAFSWTSLISGYFRCGRTEEALQLFD 172
S+++ A L+ R + + ER F ++L+ Y +CG E++ Q FD
Sbjct: 310 DFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFD 369
Query: 173 QMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKL 232
+M E+++VT +++ G+A G VD A F+ M +
Sbjct: 370 EMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGC---------------------- 407
Query: 233 FLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM-------PDRNHVSWTAMVSGLAQN 285
P N ++ ++S C A V+ + +F++M P H ++ +V L +
Sbjct: 408 ---GPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEH--YSCIVDMLGRA 462
Query: 286 KMVEVARKYFDIMPFKD-MAAWSAMITA 312
MVE A ++ MP + ++ W A+ A
Sbjct: 463 GMVERAYEFIKKMPIQPTISVWGALQNA 490
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 121/295 (41%), Gaps = 53/295 (17%)
Query: 116 DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQM- 174
DV + D Y K D+AR++FD + ERN +W + IS GR EA++ F +
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFR 201
Query: 175 ---SERSVVTWTTMV---------------------SGFAQ-----NGLVDHARR----- 200
+ +T+ + SGF NGL+D +
Sbjct: 202 RIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIR 261
Query: 201 ----FFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSAN- 255
F M KN ++W ++V +Y+ N + + L+L + V + + MIS LSA
Sbjct: 262 SSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACA 321
Query: 256 -----RVDEAI--HLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSA 308
+ +I H + +R +A+V + +E + + FD MP K++ ++
Sbjct: 322 GMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNS 381
Query: 309 MITAYVDEKLLGEALELFNLV------PEKNVGIWNTIIDGYVRNGEAGEALRLF 357
+I Y + + AL LF + P N + +++ R G +++F
Sbjct: 382 LIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIF 436
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 4/149 (2%)
Query: 389 HAMVIH-LGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGH 447
HA ++ L ++ N LI +YSK SA LV L +++VVSWT++I A +GH
Sbjct: 29 HARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGH 88
Query: 448 GHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFD-SIKGAYNLNLKVEHY 506
AL F M G P++ TF A + L G+++ ++K L++ V
Sbjct: 89 FSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCS 148
Query: 507 SCLVDMLGRAGLVNEAMDVVSTIPPSEID 535
+ DM + L ++A + IP ++
Sbjct: 149 A--FDMYCKTRLRDDARKLFDEIPERNLE 175
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 103/292 (35%), Gaps = 84/292 (28%)
Query: 91 SMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVF---------- 140
S +Y K + A +F + ER++ +A + GR A E F
Sbjct: 148 SAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHP 207
Query: 141 ------------------------DNMTERNAFS-----WTSLISGYFRCGRTEEALQLF 171
+ R+ F LI Y +C + + +F
Sbjct: 208 NSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIF 267
Query: 172 DQMSERSVVTWTTMVSGFAQNGLVDHARRFF-----------DLM--------------- 205
+M ++ V+W ++V+ + QN + A + D M
Sbjct: 268 TEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLE 327
Query: 206 -------------PEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCL 252
E+ +A+V Y G + + F EMPE+N+ + N +I G
Sbjct: 328 LGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYA 387
Query: 253 SANRVDEAIHLFETM------PDRNHVSWTAMVSGLAQNKMVEVARKYFDIM 298
+VD A+ LFE M P N++++ +++S ++ VE K FD M
Sbjct: 388 HQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSM 439
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 169/638 (26%), Positives = 297/638 (46%), Gaps = 106/638 (16%)
Query: 71 LKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSER--------------- 115
L +A K+FDEM +R+ V++ +M++ Y + + A +++ M +
Sbjct: 56 LSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLK 115
Query: 116 -------------------------DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFS 150
DVV +++VD Y K GRL A F + ++ S
Sbjct: 116 ACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTS 175
Query: 151 WTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNG-------LVDHARRFFD 203
W +LISGY + G +EA+ LF +M + +VV+W ++SGF G LV R
Sbjct: 176 WNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLV 235
Query: 204 L----MP---------------------------EKNTIAWTAMVKSYLDNGQFSEGYKL 232
L +P E + A +A++ Y + G +
Sbjct: 236 LDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADV 295
Query: 233 FLEMP---ERNVRSWNVMISGCLSANRVDEAIHLFETMPDRN--------------HVSW 275
F + +V WN M+SG L + A+ L + + +++
Sbjct: 296 FHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINY 355
Query: 276 TAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVG 335
+ GL + +V V+ D + S ++ + + + +A +LF+ +P K++
Sbjct: 356 VNLRLGLQVHSLVVVSGYELDYI------VGSILVDLHANVGNIQDAHKLFHRLPNKDII 409
Query: 336 IWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI---MQAHAMV 392
++ +I G V++G A LF +++ +++I+ C + + Q H +
Sbjct: 410 AFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLC 469
Query: 393 IHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHAL 452
I G+E AL+ +Y K G++ + +++F+ + +DVVSWT +IV + +G A
Sbjct: 470 IKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAF 529
Query: 453 QVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDM 512
+ F +M+ G +P+++TF+GLLSAC H+GL+ + R +++K Y L +EHY C+VD+
Sbjct: 530 RYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDL 589
Query: 513 LGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGG 572
LG+AGL EA ++++ +P E D+ + +LL AC H N + I +KLL P
Sbjct: 590 LGQAGLFQEANELINKMPL-EPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSV 648
Query: 573 YVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQI 610
Y LSNAYA WD+ ++VR+ K+ K+ SG S I
Sbjct: 649 YTSLSNAYATLGMWDQLSKVREAAKKLGAKE-SGMSWI 685
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 111/486 (22%), Positives = 221/486 (45%), Gaps = 38/486 (7%)
Query: 67 RRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDG 126
+RG+ +A + + Q ++ N++I++Y+ + + A +F MSER++V + MV G
Sbjct: 22 KRGESIQAHVIKQGISQNVFIA-NNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSG 80
Query: 127 YAKAGRLDNAREVFDNMTER-----NAFSWTSLISGYFRCGRTEEALQLFDQMSERS--- 178
Y G+ + A E++ M + N F +++++ G + + +++++ + +
Sbjct: 81 YTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRG 140
Query: 179 -VVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMP 237
VV ++V + +NG + A F + ++ +W ++ Y G E LF MP
Sbjct: 141 DVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMP 200
Query: 238 ERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGL-----------AQNK 286
+ NV SWN +ISG + L + + A+ GL +
Sbjct: 201 QPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQL 260
Query: 287 MVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFN---LVPEKNVGIWNTIIDG 343
V + + PF A SA+I Y + L A ++F+ L +V +WN+++ G
Sbjct: 261 HCCVVKSGLESSPF----AISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSG 316
Query: 344 YVRNGEAGEALRLFILMLRS--CFRPCVTTMTSIITSCDGMVEI---MQAHAMVIHLGFE 398
++ N E AL L + + +S CF T++ + C V + +Q H++V+ G+E
Sbjct: 317 FLINEENEAALWLLLQIYQSDLCFDS--YTLSGALKICINYVNLRLGLQVHSLVVVSGYE 374
Query: 399 QNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARM 458
+ V + L+ L++ G++ A +F L +KD+++++ +I G A +F +
Sbjct: 375 LDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFREL 434
Query: 459 VTSGTKPDEITFVGLLSACSHAGLVNQGRRVFD-SIKGAYNLNLKVEHYSCLVDMLGRAG 517
+ G D+ +L CS + G+++ IK Y + LVDM + G
Sbjct: 435 IKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTA--TALVDMYVKCG 492
Query: 518 LVNEAM 523
++ +
Sbjct: 493 EIDNGV 498
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 384 EIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYA 443
E +QAH VI G QN ++ N +I++Y L A VF+ + +++V+WT M+ Y
Sbjct: 25 ESIQAH--VIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYT 82
Query: 444 NHGHGHHALQVFARMVTSGTK-PDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLK 502
+ G + A++++ RM+ S + +E + +L AC G + G V++ I G NL
Sbjct: 83 SDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERI-GKENLRGD 141
Query: 503 VEHYSCLVDMLGRAGLVNEAMDVVSTI-PPSEIDEAVLVALLGACK 547
V + +VDM + G + EA I PS L++ G CK
Sbjct: 142 VVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLIS--GYCK 185
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 172/692 (24%), Positives = 313/692 (45%), Gaps = 105/692 (15%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQ- 120
+++ + G + +ARK+FD M +R+ ++++MI Y + +F+ M + V+
Sbjct: 122 LSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDD 181
Query: 121 --------------------------------------SAMVDGYAKAGRLDNAREVFDN 142
++++ YAK G LD A + F
Sbjct: 182 FLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRR 241
Query: 143 MTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHA 198
M ER+ +W S++ Y + G+ EEA++L +M + + VTW ++ G+ Q G D A
Sbjct: 242 MRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAA 301
Query: 199 RRFFDLMPEKNTIA-------WTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGC 251
DLM + T WTAM+ + NG + +F +M V V I
Sbjct: 302 ---MDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSA 358
Query: 252 LSA---------------------------------------NRVDEAIHLFETMPDRNH 272
+SA ++++A +F+++ +++
Sbjct: 359 VSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDV 418
Query: 273 VSWTAMVSGLAQ----NKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNL 328
+W +M++G Q K E+ + D ++ W+ MI+ Y+ GEA++LF
Sbjct: 419 YTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQR 478
Query: 329 VP-----EKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMV 383
+ ++N WN II GY++NG+ EAL LF M S F P T+ S++ +C ++
Sbjct: 479 MEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLL 538
Query: 384 E---IMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIV 440
+ + H V+ + V NAL Y+KSGD+ + +F +++KD+++W ++I
Sbjct: 539 GAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIG 598
Query: 441 AYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLN 500
Y HG AL +F +M T G P+ T ++ A G V++G++VF SI Y++
Sbjct: 599 GYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHII 658
Query: 501 LKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQ 560
+EH S +V + GRA + EA+ + + + + + L C++HG+I +A +
Sbjct: 659 PALEHCSAMVYLYGRANRLEEALQFIQEMNIQS-ETPIWESFLTGCRIHGDIDMAIHAAE 717
Query: 561 KLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFF 620
L SLEP ++ ++S YA + + K ++ +KK G S I+V+ H F
Sbjct: 718 NLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFT 777
Query: 621 VGERSHPQVEEIYGFLQQSLQPLMRETGYTPE 652
G++S + +Y +++ + R Y E
Sbjct: 778 TGDQSKLCTDVLYPLVEKMSRLDNRSDQYNGE 809
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/500 (22%), Positives = 201/500 (40%), Gaps = 100/500 (20%)
Query: 47 ISISHDWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAE 106
I + LR N + + + G+L A K F M +RD +++NS++ Y +N A
Sbjct: 208 IKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAV 267
Query: 107 TIFKAMSERDV----VAQSAMVDGYAKAGRLDNAREVFDNM----TERNAFSWTSLISGY 158
+ K M + + V + ++ GY + G+ D A ++ M + F+WT++ISG
Sbjct: 268 ELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGL 327
Query: 159 FRCGRTEEALQLFDQM----------------------------SE-----------RSV 179
G +AL +F +M SE V
Sbjct: 328 IHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDV 387
Query: 180 VTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPER 239
+ ++V +++ G ++ AR+ FD + K+ W +M+ Y G + Y+LF M +
Sbjct: 388 LVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDA 447
Query: 240 NVR----SWNVMISGCLSANRVDEAIHLFETMP-----DRNHVSWTAMVSGLAQNKMVEV 290
N+R +WN MISG + EA+ LF+ M RN +W +++G QN +
Sbjct: 448 NLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDE 507
Query: 291 ARKYFDIMPF-----------------------------------KDMAAWSAMITAYVD 315
A + F M F +++ A A+ A D
Sbjct: 508 ALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTD 567
Query: 316 EKLLGEALE----LFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTT 371
+E +F + K++ WN++I GYV +G G AL LF M P T
Sbjct: 568 TYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGT 627
Query: 372 MTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVT----NALITLYSKSGDLCSAM-LVFEL 426
++SII + M + + + + + + +A++ LY ++ L A+ + E+
Sbjct: 628 LSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEM 687
Query: 427 LKSKDVVSWTAMIVAYANHG 446
+ W + + HG
Sbjct: 688 NIQSETPIWESFLTGCRIHG 707
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 143/325 (44%), Gaps = 31/325 (9%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSER--- 115
N + + + GKL++ARK+FD + +D ++NSMI Y + A +F M +
Sbjct: 391 NSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLR 450
Query: 116 -DVVAQSAMVDGYAKAGRLDNAREVF-----DNMTERNAFSWTSLISGYFRCGRTEEALQ 169
+++ + M+ GY K G A ++F D +RN +W +I+GY + G+ +EAL+
Sbjct: 451 PNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALE 510
Query: 170 LFDQMS----ERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAW----TAMVKSYL 221
LF +M + VT +++ A R + +N A A+ +Y
Sbjct: 511 LFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYA 570
Query: 222 DNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM------PDRNHVSW 275
+G +FL M +++ +WN +I G + A+ LF M P+R +S
Sbjct: 571 KSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSS 630
Query: 276 TAMVSGLAQNKMVEVARKYF-----DIMPFKDMAAWSAMITAYVDEKLLGEALELFN-LV 329
+ GL N V+ +K F D + SAM+ Y L EAL+ +
Sbjct: 631 IILAHGLMGN--VDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMN 688
Query: 330 PEKNVGIWNTIIDGYVRNGEAGEAL 354
+ IW + + G +G+ A+
Sbjct: 689 IQSETPIWESFLTGCRIHGDIDMAI 713
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 155/339 (45%), Gaps = 15/339 (4%)
Query: 295 FDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEAL 354
F + D+ + +++ Y + +A ++F+ + E+N+ W+ +I Y R E
Sbjct: 107 FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVA 166
Query: 355 RLFILMLRSCFRPCVTTMTSIITSCD--GMVEIMQA-HAMVIHLGFEQNTWVTNALITLY 411
+LF LM++ P I+ C G VE + H++VI LG V+N+++ +Y
Sbjct: 167 KLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVY 226
Query: 412 SKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFV 471
+K G+L A F ++ +DV++W ++++AY +G A+++ M G P +T+
Sbjct: 227 AKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWN 286
Query: 472 GLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDV-----V 526
L+ + G + + ++ + + V ++ ++ L G+ +A+D+ +
Sbjct: 287 ILIGGYNQLGKCDAAMDLMQKME-TFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFL 345
Query: 527 STIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQW 586
+ + P+ + V+ K+ +SI K+ ++ G L + Y+ +
Sbjct: 346 AGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNS--LVDMYSKCGKL 403
Query: 587 DEFAQVRKRMKEKNV----KKISGFSQIQVKGKNHLFFV 621
++ +V +K K+V I+G+ Q GK + F
Sbjct: 404 EDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFT 442
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 85/185 (45%), Gaps = 16/185 (8%)
Query: 327 NLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIM 386
N++P++ D RNG EA + + + + +T ++ SC I
Sbjct: 46 NIIPDEQ-------FDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIH 98
Query: 387 QAHAMVIHLGF--EQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYAN 444
+ G E + +V L+++Y+K G + A VF+ ++ +++ +W+AMI AY+
Sbjct: 99 LGRILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSR 158
Query: 445 HGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVE 504
++F M+ G PD+ F +L C++ G V G+ + +++ +K+
Sbjct: 159 ENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVI-------HSVVIKLG 211
Query: 505 HYSCL 509
SCL
Sbjct: 212 MSSCL 216
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 202/348 (58%), Gaps = 5/348 (1%)
Query: 260 AIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLL 319
A + + MP R+ VSW +++S + +V+ AR FD M +++ +W+ MI+ Y L+
Sbjct: 194 ARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLV 253
Query: 320 GEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLR-SCFRPCVTTMTSIITS 378
EA E+F+ +P ++V WN ++ Y G E L +F ML S +P T+ S++++
Sbjct: 254 KEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSA 313
Query: 379 CDGMVEIMQA---HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSW 435
C + + Q H + G E ++ AL+ +YSK G + A+ VF +DV +W
Sbjct: 314 CASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTW 373
Query: 436 TAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKG 495
++I + HG G AL++F+ MV G KP+ ITF+G+LSAC+H G+++Q R++F+ +
Sbjct: 374 NSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSS 433
Query: 496 AYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVA 555
Y + +EHY C+VD+LGR G + EA ++V+ IP E +L +LLGACK G ++ A
Sbjct: 434 VYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEAS-ILLESLLGACKRFGQLEQA 492
Query: 556 NSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKK 603
I +LL L S GY +SN YA++ +W++ R+ M+ + V +
Sbjct: 493 ERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNR 540
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 150/297 (50%), Gaps = 26/297 (8%)
Query: 96 YLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLI 155
+ + + +HG K+ DV ++ +V+ Y ++G + AR+V D M R+A SW SL+
Sbjct: 156 FEEGRQIHG--LFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLL 213
Query: 156 SGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTA 215
S Y G +EA LFD+M ER+V +W M+SG+A GLV A+ FD MP ++ ++W A
Sbjct: 214 SAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNA 273
Query: 216 MVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSW 275
MV +Y G ++E ++F +M +D++ + + +S
Sbjct: 274 MVTAYAHVGCYNEVLEVFNKM--------------------LDDSTEKPDGFTLVSVLSA 313
Query: 276 TAMVSGLAQNKMVEVARKYFDIMPFK-DMAAWSAMITAYVDEKLLGEALELFNLVPEKNV 334
A + L+Q + V V Y D + + +A++ Y + +ALE+F +++V
Sbjct: 314 CASLGSLSQGEWVHV---YIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDV 370
Query: 335 GIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAM 391
WN+II +G +AL +F M+ F+P T ++++C+ + + QA +
Sbjct: 371 STWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKL 427
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 156/318 (49%), Gaps = 21/318 (6%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVV 118
N + + GR G + ARK+ D MP RDAVS+NS+++ YL+ V A +F M ER+V
Sbjct: 179 NTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVE 238
Query: 119 AQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERS 178
+ + M+ GYA AG + A+EVFD+M R+ SW ++++ Y G E L++F++M + S
Sbjct: 239 SWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDS 298
Query: 179 V-----VTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAW-----TAMVKSYLDNGQFSE 228
T +++S A G + + + +K+ I TA+V Y G+ +
Sbjct: 299 TEKPDGFTLVSVLSACASLGSLSQG-EWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDK 357
Query: 229 GYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMP----DRNHVSWTAMVSGLAQ 284
++F +R+V +WN +IS +A+ +F M N +++ ++S
Sbjct: 358 ALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNH 417
Query: 285 NKMVEVARKYFDIMPF-----KDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGI-WN 338
M++ ARK F++M + + M+ + EA EL N +P I
Sbjct: 418 VGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLE 477
Query: 339 TIIDGYVRNGEAGEALRL 356
+++ R G+ +A R+
Sbjct: 478 SLLGACKRFGQLEQAERI 495
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 107/244 (43%), Gaps = 15/244 (6%)
Query: 315 DEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTS 374
+ K + A + N + N N++I Y + AL +F ML P + T
Sbjct: 86 EPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTF 145
Query: 375 IITSCD---GMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKD 431
++ +C G E Q H + I G + +V N L+ +Y +SG A V + + +D
Sbjct: 146 VLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRD 205
Query: 432 VVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFD 491
VSW +++ AY G A +F M + ++ ++S + AGLV + + VFD
Sbjct: 206 AVSWNSLLSAYLEKGLVDEARALFDEMEERNVE----SWNFMISGYAAAGLVKEAKEVFD 261
Query: 492 SIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTI---PPSEIDEAVLVALLGACKL 548
S+ V ++ +V G NE ++V + + + D LV++L AC
Sbjct: 262 SMPVR-----DVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACAS 316
Query: 549 HGNI 552
G++
Sbjct: 317 LGSL 320
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 155/545 (28%), Positives = 264/545 (48%), Gaps = 36/545 (6%)
Query: 115 RDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQM 174
RD++A + G + AR+VFD + +R + S+I Y R +E L+L+DQM
Sbjct: 54 RDLIASCG------RIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQM 107
Query: 175 SERSV----VTWTTMVSGFAQNGLVDHAR----RFFDLMPEKNTIAWTAMVKSYLDNGQF 226
+ T+T + +++ + D + + ++++ Y+ G+
Sbjct: 108 IAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKM 167
Query: 227 SEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPD----RNHVSWTAMVSG- 281
E LF +M +R+V W M++G A + +A+ + M + R+ V ++
Sbjct: 168 DEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQAS 227
Query: 282 --LAQNKMVEVARKYF--DIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIW 337
L KM Y +P ++ ++++ Y + A +F+ + K W
Sbjct: 228 GDLGDTKMGRSVHGYLYRTGLPM-NVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSW 286
Query: 338 NTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQA---HAMVIH 394
++I G+ +NG A +A + M F+P + T+ ++ +C + + H ++
Sbjct: 287 GSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILK 346
Query: 395 LGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQV 454
T AL+ +YSK G L S+ +FE + KD+V W MI Y HG+G + +
Sbjct: 347 RHVLDRVTAT-ALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSL 405
Query: 455 FARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLG 514
F +M S +PD TF LLSA SH+GLV QG+ F + Y + +HY CL+D+L
Sbjct: 406 FLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLA 465
Query: 515 RAGLVNEAMDVVSTIPPSEIDEA--VLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGG 572
RAG V EA+D++++ ++D A + VALL C H N+ V + K+L L P S G
Sbjct: 466 RAGRVEEALDMINS---EKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGI 522
Query: 573 YVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEI 632
L+SN +A +W E A+VRK M+ ++K+ G+S I+V G+ F + + SH E
Sbjct: 523 QTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSH---HEH 579
Query: 633 YGFLQ 637
Y LQ
Sbjct: 580 YHMLQ 584
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/467 (21%), Positives = 183/467 (39%), Gaps = 107/467 (22%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAM--------- 112
I GR G++ ARK+FDE+PQR YNSMI VY + K+ ++ M
Sbjct: 57 IASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDS 116
Query: 113 ------------------------------SERDVVAQSAMVDGYAKAGRLDNAREVFDN 142
+ DV S++++ Y K G++D A +F
Sbjct: 117 STFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGK 176
Query: 143 MTERNAFSWTSLISGYFRCGRTEEALQLFDQMSER------------------------- 177
M +R+ WT++++G+ + G++ +A++ + +M
Sbjct: 177 MAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMG 236
Query: 178 --------------SVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDN 223
+VV T++V +A+ G ++ A R F M K ++W +++ + N
Sbjct: 237 RSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQN 296
Query: 224 GQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLA 283
G ++ ++ +EM + V + G L A + V L
Sbjct: 297 GLANKAFEAVVEMQSLGFQPDLVTLVGVLVA---------------------CSQVGSLK 335
Query: 284 QNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDG 343
++V Y D +A++ Y L + E+F V K++ WNT+I
Sbjct: 336 TGRLVHC---YILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISC 392
Query: 344 YVRNGEAGEALRLFILMLRSCFRPCVTTMTSIIT--SCDGMVEIMQA--HAMVIHLGFEQ 399
Y +G E + LF+ M S P T S+++ S G+VE Q M+ +
Sbjct: 393 YGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQP 452
Query: 400 NTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVS-WTAMIVAYANH 445
+ LI L +++G + A+ + K + + W A++ NH
Sbjct: 453 SEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINH 499
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 144/516 (27%), Positives = 259/516 (50%), Gaps = 69/516 (13%)
Query: 152 TSLISGYFRCGRTEEALQLFDQMSERSVVT---WTTMVSGFAQNGLVDHARRFFDLMPEK 208
+ LI+ + C R + A ++FD +++ S++T W M G+++NG P
Sbjct: 171 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNG-----------SPRD 219
Query: 209 NTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSAN--RVDEAIHLFET 266
I + M+ S+++ G FS +V + C+ RV IH
Sbjct: 220 ALIVYVDMLCSFIEPGNFS----------------ISVALKACVDLKDLRVGRGIH---- 259
Query: 267 MPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELF 326
++ ++ + D ++ ++ Y++ L +A ++F
Sbjct: 260 ---------------------AQIVKRKEKV----DQVVYNVLLKLYMESGLFDDARKVF 294
Query: 327 NLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIM 386
+ + E+NV WN++I + E LF M T+T+I+ +C + ++
Sbjct: 295 DGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALL 354
Query: 387 ---QAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYA 443
+ HA ++ + + + N+L+ +Y K G++ + VF+++ +KD+ SW M+ YA
Sbjct: 355 TGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYA 414
Query: 444 NHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKV 503
+G+ + +F M+ SG PD ITFV LLS CS GL G +F+ +K + ++ +
Sbjct: 415 INGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPAL 474
Query: 504 EHYSCLVDMLGRAGLVNEAMDVVSTIP--PSEIDEAVLVALLGACKLHGNIKVANSIGQK 561
EHY+CLVD+LGRAG + EA+ V+ T+P PS ++ +LL +C+LHGN+ V ++
Sbjct: 475 EHYACLVDILGRAGKIKEAVKVIETMPFKPS---ASIWGSLLNSCRLHGNVSVGEIAAKE 531
Query: 562 LLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFV 621
L LEP + G YV++SN YA + WD ++R+ MK++ VKK +G S +QVK K +F
Sbjct: 532 LFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVA 591
Query: 622 GERSHPQVEEIYGFLQQSLQPLMRETGYTPENSLLI 657
G + + Y + LQ + ++GY+P S+++
Sbjct: 592 GGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVL 627
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 130/293 (44%), Gaps = 35/293 (11%)
Query: 42 NFTASISISHDWSLRK----RNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYL 97
NF+ S+++ L+ R + I+ R+ K+ D V YN ++ +Y+
Sbjct: 236 NFSISVALKACVDLKDLRVGRGIHAQIVKRKEKV-------------DQVVYNVLLKLYM 282
Query: 98 KNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERN-AFSWTSLIS 156
++ A +F MSER+VV ++++ +K R+ +F M E FSW +L +
Sbjct: 283 ESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTT 342
Query: 157 GYFRCGRTEEAL-------QLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKN 209
C R L Q+ + V +++ + + G V+++RR FD+M K+
Sbjct: 343 ILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKD 402
Query: 210 TIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVR----SWNVMISGCLSANRVDEAIHLFE 265
+W M+ Y NG E LF M E V ++ ++SGC + + LFE
Sbjct: 403 LASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFE 462
Query: 266 TMPDRNHVS-----WTAMVSGLAQNKMVEVARKYFDIMPFKDMAA-WSAMITA 312
M VS + +V L + ++ A K + MPFK A+ W +++ +
Sbjct: 463 RMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNS 515
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 133/297 (44%), Gaps = 21/297 (7%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDV- 117
NV + + G +ARK+FD M +R+ V++NS+I+V K VH +F+ M E +
Sbjct: 275 NVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIG 334
Query: 118 ---VAQSAMVDGYAKAGRLDNARE----VFDNMTERNAFSWTSLISGYFRCGRTEEALQL 170
+ ++ ++ L +E + + + + SL+ Y +CG E + ++
Sbjct: 335 FSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRV 394
Query: 171 FDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQF 226
FD M + + +W M++ +A NG ++ F+ M E + I + A++ D G
Sbjct: 395 FDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLT 454
Query: 227 SEGYKLFLEMPERNVRSWNVMISGCL-----SANRVDEAIHLFETMPDRNHVS-WTAMVS 280
G LF M S + CL A ++ EA+ + ETMP + S W ++++
Sbjct: 455 EYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLN 514
Query: 281 GLAQNKMV---EVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNV 334
+ V E+A K ++ + + + Y D K+ ++ ++ ++ V
Sbjct: 515 SCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGV 571
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 157/353 (44%), Gaps = 28/353 (7%)
Query: 121 SAMVDGYAKAGRLDNAREVFDNMTERNAFS---WTSLISGYFRCGRTEEALQLFDQMSER 177
S ++ ++ RLD AR++FD++T+ + + W ++ GY R G +AL ++ M
Sbjct: 171 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCS 230
Query: 178 SVVTWTTMVSGFAQNGLVD----------HARRFFDLMPEKNTIAWTAMVKSYLDNGQFS 227
+ +S A VD HA + + + + + ++K Y+++G F
Sbjct: 231 FIEPGNFSIS-VALKACVDLKDLRVGRGIHA-QIVKRKEKVDQVVYNVLLKLYMESGLFD 288
Query: 228 EGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRN-HVSWTAMVSGLAQNK 286
+ K+F M ERNV +WN +IS RV E +LF M + SW + + L
Sbjct: 289 DARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACS 348
Query: 287 MV-------EVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNT 339
V E+ + D+ ++++ Y + + +F+++ K++ WN
Sbjct: 349 RVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNI 408
Query: 340 IIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCD--GMVEIMQAHAMVIHLGF 397
+++ Y NG E + LF M+ S P T ++++ C G+ E + + F
Sbjct: 409 MLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEF 468
Query: 398 EQNTWVTN--ALITLYSKSGDLCSAMLVFELLKSKDVVS-WTAMIVAYANHGH 447
+ + + L+ + ++G + A+ V E + K S W +++ + HG+
Sbjct: 469 RVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGN 521
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 169/631 (26%), Positives = 284/631 (45%), Gaps = 122/631 (19%)
Query: 67 RRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKN--------------------------- 99
++G + A+ LFDEMP+RD V +N++I Y +N
Sbjct: 97 KKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVN 156
Query: 100 --------------KDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTE 145
+ VHG K+ E D ++A++ Y+K L +A +F M +
Sbjct: 157 LLPFCGQCGFVSQGRSVHGVAA--KSGLELDSQVKNALISFYSKCAELGSAEVLFREMKD 214
Query: 146 RNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTW------------------- 182
++ SW ++I Y + G EEA+ +F M E++V VT
Sbjct: 215 KSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVK 274
Query: 183 ----------TTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQ------- 225
T++V +++ G + A R + + + + T++V Y + G
Sbjct: 275 CGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVY 334
Query: 226 FSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQN 285
FS+ +L +++ + ++ GC ++ +D + L A+ SGL
Sbjct: 335 FSKTRQLCMKIDAVALVG---ILHGCKKSSHIDIGMSLHGY----------AIKSGLCTK 381
Query: 286 KMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYV 345
+V + +IT Y + L LF + E + WN++I G V
Sbjct: 382 TLVV-----------------NGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCV 424
Query: 346 RNGEAGEALRLF-ILMLRSCFRPCVTTMTSIITSCDGMVEI---MQAHAMVIHLGFEQNT 401
++G A A +F +ML P T+ S++ C + + + H + FE
Sbjct: 425 QSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENEN 484
Query: 402 WVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTS 461
+V ALI +Y+K G+ A VF+ +K+ +W +MI Y+ G H AL + M
Sbjct: 485 FVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREK 544
Query: 462 GTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNE 521
G KPDEITF+G+LSAC+H G V++G+ F ++ + ++ ++HY+ +V +LGRA L E
Sbjct: 545 GLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTE 604
Query: 522 AMDVV--STIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNA 579
A+ ++ I P D AV ALL AC +H ++V + +K+ L+ + G YVL+SN
Sbjct: 605 ALYLIWKMDIKP---DSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNL 661
Query: 580 YAAEEQWDEFAQVRKRMKEKNVKKISGFSQI 610
YA E WD+ +VR MK+ G SQI
Sbjct: 662 YATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 201/442 (45%), Gaps = 31/442 (7%)
Query: 110 KAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQ 169
K+ +R V ++++++ Y K G + +A+ +FD M ER+ W +LI GY R G +A +
Sbjct: 78 KSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWK 137
Query: 170 LFDQMSER----SVVTWTTMVSGFAQNGLVDHARRFFDLMP----EKNTIAWTAMVKSYL 221
LF M ++ S T ++ Q G V R + E ++ A++ Y
Sbjct: 138 LFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYS 197
Query: 222 DNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRN-HVSWTAMVS 280
+ LF EM +++ SWN MI + +EAI +F+ M ++N +S +++
Sbjct: 198 KCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIIN 257
Query: 281 GLAQNKMVEVARKYFDIMPFK-----DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVG 335
L+ + V+ + + K D++ ++++ AY L A L+ + ++
Sbjct: 258 LLSAH----VSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIV 313
Query: 336 IWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI---MQAHAMV 392
+I+ Y G+ A+ F + C + + I+ C I M H
Sbjct: 314 GLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYA 373
Query: 393 IHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHAL 452
I G T V N LIT+YSK D+ + + +FE L+ ++SW ++I G A
Sbjct: 374 IKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAF 433
Query: 453 QVFAR-MVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNL--NLKVEHYSC- 508
+VF + M+T G PD IT LL+ CS +N G+ + Y L N + E++ C
Sbjct: 434 EVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELH-----GYTLRNNFENENFVCT 488
Query: 509 -LVDMLGRAGLVNEAMDVVSTI 529
L+DM + G +A V +I
Sbjct: 489 ALIDMYAKCGNEVQAESVFKSI 510
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 81/165 (49%), Gaps = 9/165 (5%)
Query: 332 KNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTM-------TSIITSCDGMVE 384
+++ +++++ + + + +F +LRS P TM T+ S VE
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 385 IMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYAN 444
+Q H + G ++ +V +L+ LY K G + SA ++F+ + +D V W A+I Y+
Sbjct: 71 QVQTH--LTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSR 128
Query: 445 HGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRV 489
+G+ A ++F M+ G P T V LL C G V+QGR V
Sbjct: 129 NGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSV 173
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 137/312 (43%), Gaps = 35/312 (11%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSER--- 115
N IT+ + ++ LF+++ + +S+NS+I+ +++ A +F M
Sbjct: 386 NGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGL 445
Query: 116 --DVVAQSAMVDGYAKAGRLDNAREV----FDNMTERNAFSWTSLISGYFRCGRTEEALQ 169
D + ++++ G ++ L+ +E+ N E F T+LI Y +CG +A
Sbjct: 446 LPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAES 505
Query: 170 LFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQ 225
+F + TW +M+SG++ +GL A + M EK + I + ++ + G
Sbjct: 506 VFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGF 565
Query: 226 FSEGYKLFLEMPER-----NVRSWNVMISGCLSANRVDEAIHLFETM---PDRNHVSWTA 277
EG F M + ++ + +M+ A EA++L M PD W A
Sbjct: 566 VDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDS--AVWGA 623
Query: 278 MVSGLAQNKMVE----VARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKN 333
++S ++ +E VARK F ++ +K+ + M Y E + + + + N++ +
Sbjct: 624 LLSACIIHRELEVGEYVARKMF-MLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNG 682
Query: 334 VGIWNTIIDGYV 345
DGY+
Sbjct: 683 Y-------DGYL 687
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 150/481 (31%), Positives = 252/481 (52%), Gaps = 45/481 (9%)
Query: 194 LVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLS 253
L+ +A + FD +PE + I+ TA++ ++ + E + F + +R +
Sbjct: 42 LIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIG 101
Query: 254 ANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVA--------------RKYFDIMP 299
++ + L + + A+ GLA N V A R+ FD
Sbjct: 102 SSTTSRDVKLGKQL------HCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTR 155
Query: 300 FKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFIL 359
++ + + +I+ Y+ + EAL LF +PE++V WN +I G+ + G EA+ F+
Sbjct: 156 DPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVD 215
Query: 360 MLR--------SCFRPCVTTMTSIITSCDGMVEIMQAHAMVIH-LGFEQNTWVTNALITL 410
MLR S F PC T S I S I HA I LG N +V N+LI+
Sbjct: 216 MLREGVVIPNESTF-PCAITAISNIASHGAGKSI---HACAIKFLGKRFNVFVWNSLISF 271
Query: 411 YSKSGDLCSAMLVFELLK--SKDVVSWTAMIVAYANHGHGHHALQVFARMVT-SGTKPDE 467
YSK G++ ++L F L+ +++VSW +MI YA++G G A+ +F +MV + +P+
Sbjct: 272 YSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNN 331
Query: 468 ITFVGLLSACSHAGLVNQGRRVFDSIKGAY---NLNLKVEHYSCLVDMLGRAGLVNEAMD 524
+T +G+L AC+HAGL+ +G F+ Y NL L++EHY+C+VDML R+G EA +
Sbjct: 332 VTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNL-LELEHYACMVDMLSRSGRFKEAEE 390
Query: 525 VVSTIPPSEIDEAV--LVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAA 582
++ ++P +D + ALLG C++H N ++A K+L L+P YV+LSNAY+A
Sbjct: 391 LIKSMP---LDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSA 447
Query: 583 EEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQP 642
E W + +R++MKE +K+ +G S I+V+ + +F ++++ +E+Y L Q
Sbjct: 448 MENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQH 507
Query: 643 L 643
L
Sbjct: 508 L 508
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 144/368 (39%), Gaps = 95/368 (25%)
Query: 71 LKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAM------------------ 112
++ A K+FDE+P+ D +S ++I ++K A FK +
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 113 --SERDV-------------------VAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSW 151
+ RDV SA+++ Y K L +AR FD+ + N S
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 152 TSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHA-RRFFDLMPEK-- 208
T+LISGY + EEAL LF M ERSVVTW ++ GF+Q G + A F D++ E
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 222
Query: 209 --------------------------------------NTIAWTAMVKSYLDNGQFSEGY 230
N W +++ Y G +
Sbjct: 223 IPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSL 282
Query: 231 KLF--LEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDR-----NHVSWTAMVSGLA 283
F LE +RN+ SWN MI G R +EA+ +FE M N+V+ ++
Sbjct: 283 LAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACN 342
Query: 284 QNKMVEVARKYFD--IMPFKD-----MAAWSAMITAYVDEKLLGEALELFNLVP-EKNVG 335
+++ YF+ + + D + ++ M+ EA EL +P + +G
Sbjct: 343 HAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIG 402
Query: 336 IWNTIIDG 343
W ++ G
Sbjct: 403 FWKALLGG 410
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 87/215 (40%), Gaps = 35/215 (16%)
Query: 310 ITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCV 369
+ ++D L+ A ++F+ +PE +V +I +V+ EA + F +L RP
Sbjct: 34 LVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNE 93
Query: 370 TTMTSIITSCDGMVEI---MQAHAMVIHLGFEQNTWVTNA-------------------- 406
T ++I S ++ Q H + +G N +V +A
Sbjct: 94 FTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDD 153
Query: 407 -----------LITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVF 455
LI+ Y K + A+ +F + + VV+W A+I ++ G A+ F
Sbjct: 154 TRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTF 213
Query: 456 ARMVTSGTK-PDEITFVGLLSACSHAGLVNQGRRV 489
M+ G P+E TF ++A S+ G+ +
Sbjct: 214 VDMLREGVVIPNESTFPCAITAISNIASHGAGKSI 248
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 158/609 (25%), Positives = 284/609 (46%), Gaps = 81/609 (13%)
Query: 82 PQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFD 141
P+ NS+I++Y K D AET+F+ + RDV++ +A+++G+A G + A + +
Sbjct: 322 PEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILN 381
Query: 142 NMTE---------------------------RNAFSWT--------------SLISGYFR 160
M R +T S+I Y +
Sbjct: 382 QMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGK 441
Query: 161 CGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFF-DLMPE------------ 207
CG T +A LF + R +V+W +M+S F+QNG A+ F +++ E
Sbjct: 442 CGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVL 501
Query: 208 --------KNTIAWTAMVKSYLDN-GQFSEGYKLFLEMPE-RNVRSWNVMISGCLSANRV 257
+++ + V +L G + + M E R++ SWN +ISGC S+
Sbjct: 502 AILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHH 561
Query: 258 DEAIHLFETMPDRNHV-----SWTAMVSGLAQNKMVEVARKYFDI----MPFKDMAAWSA 308
E++ F+ M + + +S +V R + + + D +
Sbjct: 562 LESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNT 621
Query: 309 MITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPC 368
+IT Y K + A+++F L+ + N+ WN +I +N E +LF + P
Sbjct: 622 LITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK---LEPN 678
Query: 369 VTTMTSIITSCDGMVEI---MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFE 425
T ++++ + MQAH +I GF+ N +V+ AL+ +YS G L + M VF
Sbjct: 679 EITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFR 738
Query: 426 LLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVT-SGTKPDEITFVGLLSACSHAGLVN 484
+ +W ++I A+ HG G A+++F + + S +P++ +F+ LLSACSH+G ++
Sbjct: 739 NSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFID 798
Query: 485 QGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLG 544
+G + ++ + + EH +VDMLGRAG + EA + ++ I + V ALL
Sbjct: 799 EGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQ-KAGVWGALLS 857
Query: 545 ACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKI 604
AC HG+ K+ + + L +EP ++ Y+ L+N Y W+E ++RK +++ +KK+
Sbjct: 858 ACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKL 917
Query: 605 SGFSQIQVK 613
G+S I V+
Sbjct: 918 PGYSVIDVR 926
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 150/623 (24%), Positives = 258/623 (41%), Gaps = 108/623 (17%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMS----E 114
N + + + L A +F M RD VS+N+++ L N + FK+M+ E
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQE 286
Query: 115 RDVVAQSAMVDG-------------------------------------YAKAGRLDNAR 137
D V S ++ Y+K G + A
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAE 346
Query: 138 EVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDH 197
VF+ + R+ S ++++G+ G EEA + +QM VD
Sbjct: 347 TVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQS------------------VD- 387
Query: 198 ARRFFDLMPEKNTIAWTAMVK---SYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSA 254
+ P+ T+ + S+ G+ GY + +EM R + N +I
Sbjct: 388 -----KIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKC 442
Query: 255 NRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYF-DIMPFKDMAAWS-----A 308
+A LF+T R+ VSW +M+S +QN A+ F +++ + +S A
Sbjct: 443 GLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLA 502
Query: 309 MITAY--VDEKLLGEA---------------LELFNLVPEKNVGIWNTIIDGYVRNGEAG 351
++T+ D + G++ L L + +++ WN++I G +G
Sbjct: 503 ILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHL 562
Query: 352 EALRLFILMLRSC-FRPCVTTMTSIITSCDGMVEIMQA---HAMVIHLGFEQNTWVTNAL 407
E+LR F M R R + T+ I++ + ++Q H + I E +T + N L
Sbjct: 563 ESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTL 622
Query: 408 ITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDE 467
IT+Y + D+ SA+ VF L+ ++ SW +I A + + G Q+F + +P+E
Sbjct: 623 ITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNE 679
Query: 468 ITFVGLLSACSHAGLVNQGRRVF-DSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVV 526
ITFVGLLSA + G + G + I+ + N V + LVDM G++ M V
Sbjct: 680 ITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVS--AALVDMYSSCGMLETGMKVF 737
Query: 527 STIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLS---LEPTSSGGYVLLSNAYAAE 583
+ I + +++ A HG + A + ++L S +EP S LLS A +
Sbjct: 738 RNSGVNSI--SAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLS-ACSHS 794
Query: 584 EQWDEFAQVRKRMKEK-NVKKIS 605
DE K+M+EK VK ++
Sbjct: 795 GFIDEGLSYYKQMEEKFGVKPVT 817
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/449 (21%), Positives = 196/449 (43%), Gaps = 36/449 (8%)
Query: 77 LFDEMPQRDAVSYNS-------MIAVYLKNKDVHGAETI----FKAMSERDVVAQSAMVD 125
LFDE+P+R+ + S ++ ++ + ++ K +D+ S ++
Sbjct: 71 LFDELPERENRTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLT 130
Query: 126 GYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQM----SERSVVT 181
Y + G L ++ +FD + E++ W S+I+ + GR A+ LF +M +E T
Sbjct: 131 FYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTT 190
Query: 182 WTTMVSGFAQNGLVDHARRFFDLMPEKNTIA----WTAMVKSYLDNGQFSEGYKLFLEMP 237
S + L L E + A++ Y S +F M
Sbjct: 191 LLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHME 250
Query: 238 ERNVRSWNVMISGCLSANRVDEAIHLFETMP----DRNHVSWTAMVSGLAQNKMVEVARK 293
R++ SWN +++ CL+ +++ F++M + + V+++ ++S + + + +
Sbjct: 251 HRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGES 310
Query: 294 YFDIM------PFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRN 347
++ P ++ +++I+ Y A +F + ++V N I++G+ N
Sbjct: 311 LHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAAN 370
Query: 348 GEAGEALRLFILMLR-SCFRPCVTTMTSIITSCDGMV---EIMQAHAMVIHLGFEQNTW- 402
G EA + M +P + T+ SI + C + E H + + +
Sbjct: 371 GMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALE 430
Query: 403 VTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVT-- 460
V N++I +Y K G A L+F+ +D+VSW +MI A++ +G H A +F +V+
Sbjct: 431 VINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEY 490
Query: 461 SGTKPDEITFVGLLSACSHAGLVNQGRRV 489
S +K T + +L++C + + G+ V
Sbjct: 491 SCSKFSLSTVLAILTSCDSSDSLIFGKSV 519
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 144/317 (45%), Gaps = 14/317 (4%)
Query: 220 YLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLF-ETMPDRNHVSWTAM 278
Y G+ LF E+ E++V WN MI+ R A+ LF E + N T +
Sbjct: 132 YGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTL 191
Query: 279 VSGLAQNKMVEVARKY-------FDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPE 331
+ + + ++RK + D + +A++ Y + L A +F +
Sbjct: 192 LLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEH 251
Query: 332 KNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIM---QA 388
+++ WNTI+ + NG ++L+ F M S T + +I++C + E+
Sbjct: 252 RDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESL 311
Query: 389 HAMVIHLGF--EQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHG 446
H +VI G+ E + V N++I++YSK GD +A VFE L +DV+S A++ +A +G
Sbjct: 312 HGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANG 371
Query: 447 HGHHALQVFARMVT-SGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEH 505
A + +M + +PD T V + S C +GR V + +E
Sbjct: 372 MFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEV 431
Query: 506 YSCLVDMLGRAGLVNEA 522
+ ++DM G+ GL +A
Sbjct: 432 INSVIDMYGKCGLTTQA 448
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 4/222 (1%)
Query: 300 FKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFIL 359
+D+A S ++T Y L + LF+ + EK+V +WN++I +NG A+ LFI
Sbjct: 119 LQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIE 178
Query: 360 MLRSCFR---PCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGD 416
M+ + S ++S + H + I G ++ + NAL+ LY+K +
Sbjct: 179 MIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGEN 238
Query: 417 LCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSA 476
L SA VF ++ +D+VSW ++ +GH +LQ F M SG + D +TF ++SA
Sbjct: 239 LSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISA 298
Query: 477 CSHAGLVNQGRRVFD-SIKGAYNLNLKVEHYSCLVDMLGRAG 517
CS + G + IK Y+ V + ++ M + G
Sbjct: 299 CSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCG 340
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 125/313 (39%), Gaps = 40/313 (12%)
Query: 58 RNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMS-ERD 116
+N IT+ GR ++ A K+F + + S+N +I+ +NK +F+ + E +
Sbjct: 619 QNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPN 678
Query: 117 VVAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQLFD 172
+ ++ + G + ++ R N F +L+ Y CG E +++F
Sbjct: 679 EITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFR 738
Query: 173 QMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMP-----EKNTIAWTAMVKSYLDNGQFS 227
S+ W +++S +G+ + A F + E N ++ +++ + +G
Sbjct: 739 NSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFID 798
Query: 228 EGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKM 287
EG + +M E+ F P H W + G A K+
Sbjct: 799 EGLSYYKQMEEK------------------------FGVKPVTEHRVWIVDMLGRA-GKL 833
Query: 288 VEVARKYFDIMPFKDMAAWSAMITA---YVDEKLLGEALE-LFNLVPEKNVGIWNTIIDG 343
E I + W A+++A + D KL E E LF + P+ N + ++ +
Sbjct: 834 REAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPD-NASYYISLANT 892
Query: 344 YVRNGEAGEALRL 356
YV G EA+RL
Sbjct: 893 YVGLGGWEEAVRL 905
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 228 bits (582), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 160/540 (29%), Positives = 260/540 (48%), Gaps = 23/540 (4%)
Query: 89 YNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNA 148
+ I L + +H T K+ RD + + YA L +AR++FD ER+
Sbjct: 14 FTRKIQTRLNTQKLHSFVT--KSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSV 71
Query: 149 FSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHARRFFDL 204
F W S+I Y + + L LF Q+ T+ + GF+++ R +
Sbjct: 72 FLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGI 131
Query: 205 MPEK----NTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEA 260
+ I +A+VK+Y G E KLF +P+ ++ WNVMI G D+
Sbjct: 132 AIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKG 191
Query: 261 IHLFETMPDRNH----VSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWS----AMITA 312
I+LF M R H + A+ SGL ++ VA ++ + S A++
Sbjct: 192 INLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNM 251
Query: 313 YVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTM 372
Y + A +FN + E ++ +++I GY R G EAL LF + S +P +
Sbjct: 252 YSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLV 311
Query: 373 TSIITSCDGM---VEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKS 429
++ SC + V + H+ VI LG E + V +ALI +YSK G L AM +F +
Sbjct: 312 AIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPE 371
Query: 430 KDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRV 489
K++VS+ ++I+ HG A + F ++ G PDEITF LL C H+GL+N+G+ +
Sbjct: 372 KNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEI 431
Query: 490 FDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLH 549
F+ +K + + + EHY +V ++G AG + EA + V ++ ID +L ALL C++H
Sbjct: 432 FERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSL-QKPIDSGILGALLSCCEVH 490
Query: 550 GNIKVANSIGQKL-LSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFS 608
N +A + + + + E S V+LSN YA +WDE ++R + E K+ G S
Sbjct: 491 ENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGIS 550
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 151/540 (27%), Positives = 262/540 (48%), Gaps = 57/540 (10%)
Query: 100 KDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYF 159
K +H A I + V A + A ++ A VF + +N F W ++I G+
Sbjct: 42 KQIH-ASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFS 100
Query: 160 RCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKS 219
R E A+ +F +D + P++ + + ++ K+
Sbjct: 101 RSSFPEMAISIF-----------------------IDMLCSSPSVKPQR--LTYPSVFKA 135
Query: 220 YLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMV 279
Y GQ +G +L + + E + D + + T +
Sbjct: 136 YGRLGQARDGRQL--------------------------HGMVIKEGLEDDSFIRNTMLH 169
Query: 280 SGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNT 339
+ ++E R + ++ F D+ AW++MI + L+ +A LF+ +P++N WN+
Sbjct: 170 MYVTCGCLIEAWRIFLGMIGF-DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNS 228
Query: 340 IIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQA---HAMVIHLG 396
+I G+VRNG +AL +F M +P TM S++ +C + Q H ++
Sbjct: 229 MISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNR 288
Query: 397 FEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFA 456
FE N+ V ALI +Y K G + + VFE K + W +MI+ AN+G A+ +F+
Sbjct: 289 FELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFS 348
Query: 457 RMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRA 516
+ SG +PD ++F+G+L+AC+H+G V++ F +K Y + ++HY+ +V++LG A
Sbjct: 349 ELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGA 408
Query: 517 GLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLL 576
GL+ EA ++ +P E D + +LL AC+ GN+++A + L L+P + GYVLL
Sbjct: 409 GLLEEAEALIKNMPVEE-DTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLL 467
Query: 577 SNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFL 636
SNAYA+ ++E + R MKE+ ++K G S I+V + H F +HP+ EIY L
Sbjct: 468 SNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLL 527
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 189/406 (46%), Gaps = 26/406 (6%)
Query: 74 ARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAM--SERDVVAQSAMVDGYAKA- 130
A +F + ++ +N++I + ++ A +IF M S V Q KA
Sbjct: 77 AYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAY 136
Query: 131 GRLDNARE-------VFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWT 183
GRL AR+ V E ++F +++ Y CG EA ++F M VV W
Sbjct: 137 GRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWN 196
Query: 184 TMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVR- 242
+M+ GFA+ GL+D A+ FD MP++N ++W +M+ ++ NG+F + +F EM E++V+
Sbjct: 197 SMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKP 256
Query: 243 ---SWNVMISGC--LSANRVDEAIH--LFETMPDRNHVSWTAMVSGLAQNKMVEVARKYF 295
+ +++ C L A+ IH + + N + TA++ + +E F
Sbjct: 257 DGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVF 316
Query: 296 DIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVP----EKNVGIWNTIIDGYVRNGEAG 351
+ P K ++ W++MI + A++LF+ + E + + ++ +GE
Sbjct: 317 ECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVH 376
Query: 352 EALRLFILML-RSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITL 410
A F LM + P + T ++ G + +A A++ ++ E++T + ++L++
Sbjct: 377 RADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSA 436
Query: 411 YSKSGDLCSAMLVFELLKSKD---VVSWTAMIVAYANHGHGHHALQ 453
K G++ A + LK D + + AYA++G A++
Sbjct: 437 CRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVE 482
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 147/297 (49%), Gaps = 21/297 (7%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVV 118
N I + G + +A+ LFDEMPQR+ VS+NSMI+ +++N A +F+ M E+DV
Sbjct: 196 NSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVK 255
Query: 119 AQS----AMVDGYAKAGRLDNAREVFD----NMTERNAFSWTSLISGYFRCGRTEEALQL 170
++++ A G + R + + N E N+ T+LI Y +CG EE L +
Sbjct: 256 PDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNV 315
Query: 171 FDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMP----EKNTIAWTAMVKSYLDNGQF 226
F+ ++ + W +M+ G A NG + A F + E +++++ ++ + +G+
Sbjct: 316 FECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEV 375
Query: 227 SEGYKLFLEMPER-----NVRSWNVMISGCLSANRVDEAIHLFETMP-DRNHVSWTAMVS 280
+ F M E+ +++ + +M++ A ++EA L + MP + + V W++++S
Sbjct: 376 HRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLS 435
Query: 281 GLAQNKMVEVAR---KYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNV 334
+ VE+A+ K + + + + AY L EA+E L+ E+ +
Sbjct: 436 ACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQM 492
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 138/464 (29%), Positives = 234/464 (50%), Gaps = 28/464 (6%)
Query: 197 HARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANR 256
+AR F+ M E + + + +M + Y E + LF+E+ E + N L A
Sbjct: 81 YARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACA 140
Query: 257 VDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDE 316
V +A+ + + +M GL N V +I Y +
Sbjct: 141 VAKALE------EGRQLHCLSMKLGLDDNVYV-----------------CPTLINMYTEC 177
Query: 317 KLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSII 376
+ + A +F+ + E V +N +I GY R EAL LF M +P T+ S++
Sbjct: 178 EDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVL 237
Query: 377 TSCD--GMVEIMQ-AHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVV 433
+SC G +++ + H F + V ALI +++K G L A+ +FE ++ KD
Sbjct: 238 SSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQ 297
Query: 434 SWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSI 493
+W+AMIVAYANHG ++ +F RM + +PDEITF+GLL+ACSH G V +GR+ F +
Sbjct: 298 AWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQM 357
Query: 494 KGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIK 553
+ + ++HY +VD+L RAG + +A + + +P S + LL AC H N+
Sbjct: 358 VSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPT-PMLWRILLAACSSHNNLD 416
Query: 554 VANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVK 613
+A + +++ L+ + G YV+LSN YA ++W+ +RK MK++ K+ G S I+V
Sbjct: 417 LAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVN 476
Query: 614 GKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPENSLLI 657
H FF G+ +++ L + ++ L + +GY P+ S+++
Sbjct: 477 NVVHEFFSGDGVKSATTKLHRALDEMVKEL-KLSGYVPDTSMVV 519
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 107/213 (50%), Gaps = 4/213 (1%)
Query: 316 EKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSI 375
E + A LF + E ++ I+N++ GY R E LF+ +L P T S+
Sbjct: 76 ESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSL 135
Query: 376 ITSC---DGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDV 432
+ +C + E Q H + + LG + N +V LI +Y++ D+ SA VF+ + V
Sbjct: 136 LKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCV 195
Query: 433 VSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDS 492
V + AMI YA + AL +F M KP+EIT + +LS+C+ G ++ G+ +
Sbjct: 196 VCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKY 255
Query: 493 IKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDV 525
K ++ V+ + L+DM + G +++A+ +
Sbjct: 256 AK-KHSFCKYVKVNTALIDMFAKCGSLDDAVSI 287
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 110/242 (45%), Gaps = 22/242 (9%)
Query: 91 SMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTER---- 146
++I +Y + +DV A +F + E VV +AM+ GYA+ R + A +F M +
Sbjct: 169 TLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKP 228
Query: 147 NAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTW----TTMVSGFAQNGLVDHARRFF 202
N + S++S G + + + S + T ++ FA+ G +D A F
Sbjct: 229 NEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIF 288
Query: 203 DLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNV----MISGCLSANRVD 258
+ M K+T AW+AM+ +Y ++G+ + +F M NV+ + +++ C RV+
Sbjct: 289 EKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVE 348
Query: 259 EAIHLFETM-------PDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAA-WSAMI 310
E F M P H + +MV L++ +E A ++ D +P W ++
Sbjct: 349 EGRKYFSQMVSKFGIVPSIKH--YGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILL 406
Query: 311 TA 312
A
Sbjct: 407 AA 408
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 117/249 (46%), Gaps = 21/249 (8%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSE---- 114
N IT RR + EA LF EM + + L + + G+ + K + +
Sbjct: 199 NAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKK 258
Query: 115 ----RDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQL 170
+ V +A++D +AK G LD+A +F+ M ++ +W+++I Y G+ E+++ +
Sbjct: 259 HSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLM 318
Query: 171 FDQMSERSV----VTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIA-----WTAMVKSYL 221
F++M +V +T+ +++ + G V+ R++F M K I + +MV
Sbjct: 319 FERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLS 378
Query: 222 DNGQFSEGYKLFLEMP-ERNVRSWNVMISGCLSANRVDEAIHLFETM--PDRNHVSWTAM 278
G + Y+ ++P W ++++ C S N +D A + E + D +H +
Sbjct: 379 RAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVI 438
Query: 279 VSGL-AQNK 286
+S L A+NK
Sbjct: 439 LSNLYARNK 447
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/313 (19%), Positives = 127/313 (40%), Gaps = 56/313 (17%)
Query: 74 ARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQS----AMVDGYAK 129
AR LF+ M + D V +NSM Y + + ++F + E ++ + +++ A
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 130 AGRLDNAREV----FDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTM 185
A L+ R++ + N + +LI+ Y C + A +FD++ E VV + M
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 186 VSGFAQNGLVDHARRFFD------LMPEKNTI----------------AW---------- 213
++G+A+ + A F L P + T+ W
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261
Query: 214 -------TAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFET 266
TA++ + G + +F +M ++ ++W+ MI + + ++++ +FE
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFER 321
Query: 267 MPDRN----HVSWTAMVSGLAQNKMVEVARKYFDIMPFK-----DMAAWSAMITAYVDEK 317
M N +++ +++ + VE RKYF M K + + +M+
Sbjct: 322 MRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAG 381
Query: 318 LLGEALELFNLVP 330
L +A E + +P
Sbjct: 382 NLEDAYEFIDKLP 394
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 155/572 (27%), Positives = 264/572 (46%), Gaps = 63/572 (11%)
Query: 114 ERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQ 173
E D V +V Y+ LD A+ + +N + W LI Y R R +E++ ++ +
Sbjct: 115 EFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKR 174
Query: 174 MSERSV---------------------------------------VTWTTMVSGFAQNGL 194
M + + ++S + + G
Sbjct: 175 MMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGK 234
Query: 195 VDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKL----FLEMPERNVRSWNVMISG 250
VD ARR FD M E++ ++W A++ Y + E +KL +L E ++ +WN + G
Sbjct: 235 VDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGG 294
Query: 251 CLSANRVDEAIHLFETMPDRN-HVSWTAMVSGLAQNKMVEVAR--KYFDIMPFKDMA--- 304
CL A A++ M + N + AM++GL + + K F + + +
Sbjct: 295 CLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSH 354
Query: 305 ----AWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILM 360
+++IT Y L A +F V ++ WN+II G+ N + E L M
Sbjct: 355 DIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEM 414
Query: 361 LRSCFRPCVTTMTSII---TSCDGMVEIMQAHAMVIHLGFEQNTWVT-NALITLYSKSGD 416
L S F P T+ SI+ + + H ++ ++ + N+L+ +Y+KSG+
Sbjct: 415 LLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGE 474
Query: 417 LCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSA 476
+ +A VF+ ++ +D V++T++I Y G G AL F M SG KPD +T V +LSA
Sbjct: 475 IIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSA 534
Query: 477 CSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDE 536
CSH+ LV +G +F ++ + + L++EHYSC+VD+ RAG +++A D+ TI P E
Sbjct: 535 CSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTI-PYEPSS 593
Query: 537 AVLVALLGACKLHGNIKVANSIGQK-LLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKR 595
A+ LL AC +HGN + K LL +P G Y+LL++ YA W + V+
Sbjct: 594 AMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTL 653
Query: 596 MKEKNVKKISGFSQIQVKGKNHLFFVGERSHP 627
+ + V+K F+ ++ + GE + P
Sbjct: 654 LSDLGVQKAHEFALMETDSE----LDGENNKP 681
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 8/184 (4%)
Query: 345 VRNGEAGEALRLFILM--LRSCFRPCVTTMTSIITSCDGMVEIM---QAHAMVIHLGFEQ 399
+ +G+ EA R F L+ + + S++++C G E + Q HA I G E
Sbjct: 57 ISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEF 116
Query: 400 NTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMV 459
++ + L+T YS L A + E + + W +I +Y + ++ V+ RM+
Sbjct: 117 DSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMM 176
Query: 460 TSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIK-GAYNLNLKVEHYSCLVDMLGRAGL 518
+ G + DE T+ ++ AC+ GR V SI+ ++ NL V + L+ M R G
Sbjct: 177 SKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYV--CNALISMYKRFGK 234
Query: 519 VNEA 522
V+ A
Sbjct: 235 VDVA 238
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 155/572 (27%), Positives = 264/572 (46%), Gaps = 63/572 (11%)
Query: 114 ERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQ 173
E D V +V Y+ LD A+ + +N + W LI Y R R +E++ ++ +
Sbjct: 115 EFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKR 174
Query: 174 MSERSV---------------------------------------VTWTTMVSGFAQNGL 194
M + + ++S + + G
Sbjct: 175 MMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGK 234
Query: 195 VDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKL----FLEMPERNVRSWNVMISG 250
VD ARR FD M E++ ++W A++ Y + E +KL +L E ++ +WN + G
Sbjct: 235 VDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGG 294
Query: 251 CLSANRVDEAIHLFETMPDRN-HVSWTAMVSGLAQNKMVEVAR--KYFDIMPFKDMA--- 304
CL A A++ M + N + AM++GL + + K F + + +
Sbjct: 295 CLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSH 354
Query: 305 ----AWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILM 360
+++IT Y L A +F V ++ WN+II G+ N + E L M
Sbjct: 355 DIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEM 414
Query: 361 LRSCFRPCVTTMTSII---TSCDGMVEIMQAHAMVIHLGFEQNTWVT-NALITLYSKSGD 416
L S F P T+ SI+ + + H ++ ++ + N+L+ +Y+KSG+
Sbjct: 415 LLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGE 474
Query: 417 LCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSA 476
+ +A VF+ ++ +D V++T++I Y G G AL F M SG KPD +T V +LSA
Sbjct: 475 IIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSA 534
Query: 477 CSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDE 536
CSH+ LV +G +F ++ + + L++EHYSC+VD+ RAG +++A D+ TI P E
Sbjct: 535 CSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTI-PYEPSS 593
Query: 537 AVLVALLGACKLHGNIKVANSIGQK-LLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKR 595
A+ LL AC +HGN + K LL +P G Y+LL++ YA W + V+
Sbjct: 594 AMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTL 653
Query: 596 MKEKNVKKISGFSQIQVKGKNHLFFVGERSHP 627
+ + V+K F+ ++ + GE + P
Sbjct: 654 LSDLGVQKAHEFALMETDSE----LDGENNKP 681
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 8/184 (4%)
Query: 345 VRNGEAGEALRLFILM--LRSCFRPCVTTMTSIITSCDGMVEIM---QAHAMVIHLGFEQ 399
+ +G+ EA R F L+ + + S++++C G E + Q HA I G E
Sbjct: 57 ISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEF 116
Query: 400 NTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMV 459
++ + L+T YS L A + E + + W +I +Y + ++ V+ RM+
Sbjct: 117 DSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMM 176
Query: 460 TSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIK-GAYNLNLKVEHYSCLVDMLGRAGL 518
+ G + DE T+ ++ AC+ GR V SI+ ++ NL V + L+ M R G
Sbjct: 177 SKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYV--CNALISMYKRFGK 234
Query: 519 VNEA 522
V+ A
Sbjct: 235 VDVA 238
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 175/613 (28%), Positives = 279/613 (45%), Gaps = 73/613 (11%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQS 121
+ + + G + EA ++F +P VS+ M++ Y K+ D A IFK M V +
Sbjct: 292 VDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINN 351
Query: 122 AMVDGYAKA-GRLDNARE-------VFDNMTERNAFSWTSLISGYFRCGRTEEALQLF-- 171
V A GR E VF + ++ +LIS Y + G + + Q+F
Sbjct: 352 CTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFED 411
Query: 172 -DQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEK---------------------- 208
D + +++V M++ F+Q+ A R F M ++
Sbjct: 412 LDDIQRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLG 469
Query: 209 --------------NTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSA 254
+ +++ Y G E YKLF +P ++ W MISG
Sbjct: 470 KQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEY 529
Query: 255 NRVDEAIHLFETM------PDRNHVSWTAMVSG----LAQNKMVE--VARKYFDIMPFKD 302
+ EAI LF M PD + ++ V L + K + R D K
Sbjct: 530 GYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGID----KG 585
Query: 303 MAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLR 362
M SA++ Y L A ++++ +PE + +++I GY ++G + LF M+
Sbjct: 586 MDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVM 645
Query: 363 SCFRPCVTTMTSIITSC---DGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCS 419
S F ++SI+ + D Q HA + +G V ++L+T+YSK G +
Sbjct: 646 SGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDD 705
Query: 420 AMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSH 479
F + D+++WTA+I +YA HG + ALQV+ M G KPD++TFVG+LSACSH
Sbjct: 706 CCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSH 765
Query: 480 AGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVST--IPPSEIDEA 537
GLV + +S+ Y + + HY C+VD LGR+G + EA ++ I P D
Sbjct: 766 GGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKP---DAL 822
Query: 538 VLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMK 597
V LL ACK+HG +++ +K + LEP+ +G Y+ LSN A +WDE + RK MK
Sbjct: 823 VWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMK 882
Query: 598 EKNVKKISGFSQI 610
V+K G+S +
Sbjct: 883 GTGVQKEPGWSSV 895
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 135/544 (24%), Positives = 245/544 (45%), Gaps = 66/544 (12%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAM----------SERDVV 118
G + +A KLFD +PQ D VS N MI+ Y +++ + F M S V+
Sbjct: 98 GSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVI 157
Query: 119 A-----------------------------QSAMVDGYAKAGRLDNAREVFDNMTERNAF 149
+ +SA++D ++K R ++A +VF + N +
Sbjct: 158 SACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVY 217
Query: 150 SWTSLISGYFRCGRTEEALQLFDQMS----ERSVVTWTTMVSGFA-----QNGLVDHARR 200
W ++I+G R LF +M + T++++++ A + G V AR
Sbjct: 218 CWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARV 277
Query: 201 FFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEA 260
++ TA+V Y G +E ++F +P +V SW VM+SG +N A
Sbjct: 278 I--KCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSA 335
Query: 261 IHLFETMP----DRNHVSWTAMVSGLAQNKMVEVARK----YFDIMPFKDMAAWSAMITA 312
+ +F+ M + N+ + T+++S + MV A + F + D + +A+I+
Sbjct: 336 LEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISM 395
Query: 313 YV---DEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCV 369
Y D L + E + + +N I N +I + ++ + G+A+RLF ML+ R
Sbjct: 396 YSKSGDIDLSEQVFEDLDDIQRQN--IVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDE 453
Query: 370 TTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKS 429
++ S+++ D + Q H + G + V ++L TLYSK G L + +F+ +
Sbjct: 454 FSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPF 513
Query: 430 KDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRV 489
KD W +MI + +G+ A+ +F+ M+ GT PDE T +L+ CS + +G+ +
Sbjct: 514 KDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEI 573
Query: 490 FDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLH 549
A ++ ++ S LV+M + G + A V +P E+D +L+ H
Sbjct: 574 HGYTLRA-GIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP--ELDPVSCSSLISGYSQH 630
Query: 550 GNIK 553
G I+
Sbjct: 631 GLIQ 634
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 123/474 (25%), Positives = 228/474 (48%), Gaps = 39/474 (8%)
Query: 116 DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMS 175
DV +++ Y+ +G + +A ++FD + + + S +ISGY + EE+L+ F +M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 176 ----ERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNT--------IAWTAMVKSYLDN 223
E + +++ +++S A + L A F +L+ + +A++ + N
Sbjct: 143 FLGFEANEISYGSVIS--ACSAL--QAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKN 198
Query: 224 GQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM------PDR-NHVSWT 276
+F + YK+F + NV WN +I+G L LF M PD + S
Sbjct: 199 LRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVL 258
Query: 277 AMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGI 336
A + L + + +V + +D+ +A++ Y + EA+E+F+ +P +V
Sbjct: 259 AACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVS 318
Query: 337 WNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC--DGMV-EIMQAHAMVI 393
W ++ GY ++ +A AL +F M S T+TS+I++C MV E Q HA V
Sbjct: 319 WTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVF 378
Query: 394 HLGFEQNTWVTNALITLYSKSGDLCSAMLVFELL---KSKDVVSWTAMIVAYANHGHGHH 450
GF ++ V ALI++YSKSGD+ + VFE L + +++V+ MI +++
Sbjct: 379 KSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMITSFSQSKKPGK 436
Query: 451 ALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFD-SIKGAYNLNLKVEHYSCL 509
A+++F RM+ G + DE + LLS +N G++V ++K L+L V S L
Sbjct: 437 AIRLFTRMLQEGLRTDEFSVCSLLSVLD---CLNLGKQVHGYTLKSGLVLDLTVG--SSL 491
Query: 510 VDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLL 563
+ + G + E+ + IP D A +++ +G ++ A + ++L
Sbjct: 492 FTLYSKCGSLEESYKLFQGIPFK--DNACWASMISGFNEYGYLREAIGLFSEML 543
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 221/500 (44%), Gaps = 31/500 (6%)
Query: 77 LFDEM----PQRDAVSYNSMIAVYLKNKDVHGAETI----FKAMSERDVVAQSAMVDGYA 128
LF EM + D+ +Y+S++A + + + + K +E DV +A+VD YA
Sbjct: 238 LFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYA 296
Query: 129 KAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTT 184
K G + A EVF + + SWT ++SGY + AL++F +M V T T+
Sbjct: 297 KCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTS 356
Query: 185 MVSGFAQNGLVD-----HARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPER 239
++S + +V HA F +++A A++ Y +G ++F ++ +
Sbjct: 357 VISACGRPSMVCEASQVHAWVFKSGFYLDSSVA-AALISMYSKSGDIDLSEQVFEDLDDI 415
Query: 240 NVRSW-NVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGL-AQNKMVEVARK 293
++ NVMI+ + + +AI LF M + S +++S L N +V
Sbjct: 416 QRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGY 475
Query: 294 YFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEA 353
D+ S++ T Y L E+ +LF +P K+ W ++I G+ G EA
Sbjct: 476 TLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREA 535
Query: 354 LRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQA---HAMVIHLGFEQNTWVTNALITL 410
+ LF ML P +T+ +++T C + + H + G ++ + +AL+ +
Sbjct: 536 IGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNM 595
Query: 411 YSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITF 470
YSK G L A V++ L D VS +++I Y+ HG +F MV SG D
Sbjct: 596 YSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAI 655
Query: 471 VGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIP 530
+L A + + + G +V I L + S L+ M + G +++ S I
Sbjct: 656 SSILKAAALSDESSLGAQVHAYIT-KIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQI- 713
Query: 531 PSEIDEAVLVALLGACKLHG 550
+ D AL+ + HG
Sbjct: 714 -NGPDLIAWTALIASYAQHG 732
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 160/344 (46%), Gaps = 38/344 (11%)
Query: 199 RRF---FDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSAN 255
RR+ FD+ K+ ++W Y ++G ++ KLF +P+ +V S N+MISG
Sbjct: 76 RRYLLPFDVFLTKSLLSW------YSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHR 129
Query: 256 RVDEAIHLFETMP----DRNHVSWTAMVSG-----------LAQNKMVEVARKYFDIMPF 300
+E++ F M + N +S+ +++S L +++ +++++
Sbjct: 130 LFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVE- 188
Query: 301 KDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILM 360
SA+I + +A ++F NV WNTII G +RN G LF M
Sbjct: 189 ------SALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEM 242
Query: 361 LRSCFRPCVTTMTSIITSCDGMVEI---MQAHAMVIHLGFEQNTWVTNALITLYSKSGDL 417
+P T +S++ +C + ++ A VI G E + +V A++ LY+K G +
Sbjct: 243 CVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHM 301
Query: 418 CSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSAC 477
AM VF + + VVSWT M+ Y AL++F M SG + + T ++SAC
Sbjct: 302 AEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISAC 361
Query: 478 SHAGLVNQGRRVFDSI-KGAYNLNLKVEHYSCLVDMLGRAGLVN 520
+V + +V + K + L+ V + L+ M ++G ++
Sbjct: 362 GRPSMVCEASQVHAWVFKSGFYLDSSVA--AALISMYSKSGDID 403
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 125/382 (32%), Positives = 214/382 (56%), Gaps = 5/382 (1%)
Query: 276 TAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVG 335
T ++S A+ ++ K F+ +P D +AM+TA + A +LF +PE++
Sbjct: 147 TGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPI 206
Query: 336 IWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQ---AHAMV 392
WN +I GY + GE+ EAL +F LM + M S++++C + + Q AH+ +
Sbjct: 207 AWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYI 266
Query: 393 IHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHAL 452
+ + L+ LY+K GD+ AM VF ++ K+V +W++ + A +G G L
Sbjct: 267 ERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCL 326
Query: 453 QVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDM 512
++F+ M G P+ +TFV +L CS G V++G+R FDS++ + + ++EHY CLVD+
Sbjct: 327 ELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDL 386
Query: 513 LGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGG 572
RAG + +A+ ++ + P + AV +LL A +++ N+++ +K+L LE + G
Sbjct: 387 YARAGRLEDAVSIIQQM-PMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGA 445
Query: 573 YVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEI 632
YVLLSN YA WD + VR+ MK K V+K G S ++V G+ H FFVG++SHP+ +I
Sbjct: 446 YVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQI 505
Query: 633 YGFLQQSLQPLMRETGYTPENS 654
+ + + +R GY + +
Sbjct: 506 DA-VWKDISRRLRLAGYKADTT 526
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 146/322 (45%), Gaps = 35/322 (10%)
Query: 42 NFTASISISHDWSLRKRNVEITILG---RRGKLKEARKLFDEMPQRDAVSYNSMIAVYLK 98
N+T + + LR R + + G RRG FD P +I++Y +
Sbjct: 108 NYTVNFLVQACTGLRMRETGLQVHGMTIRRG--------FDNDPH----VQTGLISLYAE 155
Query: 99 NKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGY 158
+ +F ++ D V ++AMV A+ G + AR++F+ M ER+ +W ++ISGY
Sbjct: 156 LGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGY 215
Query: 159 FRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAW- 213
+ G + EAL +F M V V +++S Q G +D R + E+N I
Sbjct: 216 AQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYI-ERNKIKIT 274
Query: 214 ----TAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPD 269
T +V Y G + ++F M E+NV +W+ ++G ++ + LF M
Sbjct: 275 VRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQ 334
Query: 270 R----NHVSWTAMVSGLAQNKMVEVARKYFDIMPFK-----DMAAWSAMITAYVDEKLLG 320
N V++ +++ G + V+ +++FD M + + + ++ Y L
Sbjct: 335 DGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLE 394
Query: 321 EALELFNLVPEK-NVGIWNTII 341
+A+ + +P K + +W++++
Sbjct: 395 DAVSIIQQMPMKPHAAVWSSLL 416
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 110/251 (43%), Gaps = 37/251 (14%)
Query: 311 TAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSC--FRPC 368
A D K L A ++ + + + N++I + ++ ++ + +L S +P
Sbjct: 48 VALSDHKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPD 107
Query: 369 VTTMTSIITSCDG--MVEI-MQAHAMVIHLGFEQNTWVTNALITLY-------------- 411
T+ ++ +C G M E +Q H M I GF+ + V LI+LY
Sbjct: 108 NYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFN 167
Query: 412 -----------------SKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQV 454
++ GD+ A +FE + +D ++W AMI YA G AL V
Sbjct: 168 SIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNV 227
Query: 455 FARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLG 514
F M G K + + + +LSAC+ G ++QGR I+ + + V + LVD+
Sbjct: 228 FHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIE-RNKIKITVRLATTLVDLYA 286
Query: 515 RAGLVNEAMDV 525
+ G + +AM+V
Sbjct: 287 KCGDMEKAMEV 297
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 132/285 (46%), Gaps = 37/285 (12%)
Query: 102 VHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRC 161
VHG TI + + D Q+ ++ YA+ G LD+ +VF+++ + T++++ RC
Sbjct: 130 VHGM-TIRRGF-DNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARC 187
Query: 162 GRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMP----EKNTIAWTAMV 217
G A +LF+ M ER + W M+SG+AQ G A F LM + N +A +++
Sbjct: 188 GDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVL 247
Query: 218 KSY-----LDNGQFSEGYKLFLEMPERN-----VRSWNVMISGCLSANRVDEAIHLFETM 267
+ LD G+++ Y ERN VR ++ +++A+ +F M
Sbjct: 248 SACTQLGALDQGRWAHSY------IERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGM 301
Query: 268 PDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAM----------ITAYVDE- 316
++N +W++ ++GLA N E + F +M +D +A+ + +VDE
Sbjct: 302 EEKNVYTWSSALNGLAMNGFGEKCLELFSLMK-QDGVTPNAVTFVSVLRGCSVVGFVDEG 360
Query: 317 -KLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILM 360
+ F + P+ + + ++D Y R G +A+ + M
Sbjct: 361 QRHFDSMRNEFGIEPQ--LEHYGCLVDLYARAGRLEDAVSIIQQM 403
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 225 bits (573), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 142/425 (33%), Positives = 226/425 (53%), Gaps = 26/425 (6%)
Query: 215 AMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM------P 268
+++ Y GQ KLF E+ ER+ SWN MISG A +A+ LF M P
Sbjct: 172 SLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEP 231
Query: 269 D-RNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAA----WSAMITAYVDEKLLGEAL 323
D R VS S L + R ++ K + S +I+ Y L A
Sbjct: 232 DERTLVSMLGACSHLGD---LRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSAR 288
Query: 324 ELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCD--G 381
+FN + +K+ W +I Y +NG++ EA +LF M ++ P T+++++++C G
Sbjct: 289 RVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVG 348
Query: 382 MVEI---MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAM 438
+E+ ++ HA L + N +V L+ +Y K G + A+ VFE + K+ +W AM
Sbjct: 349 ALELGKQIETHAS--ELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAM 406
Query: 439 IVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYN 498
I AYA+ GH AL +F RM P +ITF+G+LSAC HAGLV+QG R F + +
Sbjct: 407 ITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFG 463
Query: 499 LNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSI 558
L K+EHY+ ++D+L RAG+++EA + + P + DE +L A+LGAC ++ +
Sbjct: 464 LVPKIEHYTNIIDLLSRAGMLDEAWEFMERF-PGKPDEIMLAAILGACHKRKDVAIREKA 522
Query: 559 GQKLLSL-EPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNH 617
+ L+ + E ++G YV+ SN A + WDE A++R M+++ V K G S I+++G+
Sbjct: 523 MRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELM 582
Query: 618 LFFVG 622
F G
Sbjct: 583 EFLAG 587
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 147/308 (47%), Gaps = 52/308 (16%)
Query: 99 NKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGY 158
+ VH ++FK ERDV +++ YAK G++ AR++FD +TER+ SW S+ISGY
Sbjct: 151 GRSVHS--SLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGY 208
Query: 159 FRCGRTEEALQLFDQM-------SERSVVTW----------------------------- 182
G ++A+ LF +M ER++V+
Sbjct: 209 SEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLST 268
Query: 183 ---TTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPER 239
+ ++S + + G +D ARR F+ M +K+ +AWTAM+ Y NG+ SE +KLF EM +
Sbjct: 269 FLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKT 328
Query: 240 NVR----SWNVMISGCLSANRVDEA----IHLFETMPDRNHVSWTAMVSGLAQNKMVEVA 291
V + + ++S C S ++ H E N T +V + VE A
Sbjct: 329 GVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEA 388
Query: 292 RKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNL--VPEKNVGIWNTIIDGYVRNGE 349
+ F+ MP K+ A W+AMITAY + EAL LF+ VP ++ + ++ V G
Sbjct: 389 LRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVPPSDI-TFIGVLSACVHAGL 447
Query: 350 AGEALRLF 357
+ R F
Sbjct: 448 VHQGCRYF 455
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 156/366 (42%), Gaps = 77/366 (21%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAM-------SE 114
I + + G++ ARKLFDE+ +RD VS+NSMI+ Y + A +F+ M E
Sbjct: 174 IMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDE 233
Query: 115 RDVVAQ--------------------------------SAMVDGYAKAGRLDNAREVFDN 142
R +V+ S ++ Y K G LD+AR VF+
Sbjct: 234 RTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQ 293
Query: 143 MTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVV----TWTTMVSGFAQNGLVDHA 198
M +++ +WT++I+ Y + G++ EA +LF +M + V T +T++S G ++
Sbjct: 294 MIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELG 353
Query: 199 RRF----FDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSA 254
++ +L + N T +V Y G+ E ++F MP +N +WN MI+
Sbjct: 354 KQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQ 413
Query: 255 NRVDEAIHLFETMP-DRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAY 313
EA+ LF+ M + +++ ++S +V +YF M
Sbjct: 414 GHAKEALLLFDRMSVPPSDITFIGVLSACVHAGLVHQGCRYFHEMS-------------- 459
Query: 314 VDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMT 373
+F LVP+ + + IID R G EA M R +P +
Sbjct: 460 ----------SMFGLVPK--IEHYTNIIDLLSRAGMLDEAWE---FMERFPGKPDEIMLA 504
Query: 374 SIITSC 379
+I+ +C
Sbjct: 505 AILGAC 510
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 5/209 (2%)
Query: 325 LFNLVPEKNVGIWNTIIDGYVRNGEAGEA-LRLFILMLRSCFRPCVTTMTSIITSCDGMV 383
LF++ E N +N +I G EA L L+ M S +P T + +C +
Sbjct: 87 LFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLE 146
Query: 384 EI---MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIV 440
EI H+ + +G E++ + ++LI +Y+K G + A +F+ + +D VSW +MI
Sbjct: 147 EIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMIS 206
Query: 441 AYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLN 500
Y+ G+ A+ +F +M G +PDE T V +L ACSH G + G R+ + + +
Sbjct: 207 GYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTG-RLLEEMAITKKIG 265
Query: 501 LKVEHYSCLVDMLGRAGLVNEAMDVVSTI 529
L S L+ M G+ G ++ A V + +
Sbjct: 266 LSTFLGSKLISMYGKCGDLDSARRVFNQM 294
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 150/490 (30%), Positives = 258/490 (52%), Gaps = 32/490 (6%)
Query: 147 NAFSWTSLISGYFRCGR---TEEALQLF-------DQMSERSVVTWTTMVSGFAQ----N 192
++FS+ +L+S Y C + T A + F D + V SG + +
Sbjct: 70 SSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIH 129
Query: 193 GLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCL 252
G+V F+D + +N+ +V Y G+ K+F EMP R+V SW +I+G
Sbjct: 130 GIVTKMG-FYDDIYVQNS-----LVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFT 183
Query: 253 SANRVDEAIHLFETMP-DRNHVSWTAMVSGLAQNKMVEVARKYFDIM----PFKDMAAWS 307
EA+ F M + N ++ ++ + + + + ++ + +
Sbjct: 184 RTGLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGN 243
Query: 308 AMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILM-LRSCFR 366
A+I YV + L +A+ +F + +K+ WN++I G V + EA+ LF LM S +
Sbjct: 244 ALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIK 303
Query: 367 PCVTTMTSIITSCDGMVEIMQA---HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLV 423
P +TS++++C + + H ++ G + +T + A++ +Y+K G + +A+ +
Sbjct: 304 PDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEI 363
Query: 424 FELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLV 483
F ++SK+V +W A++ A HGHG +L+ F MV G KP+ +TF+ L+AC H GLV
Sbjct: 364 FNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLV 423
Query: 484 NQGRRVFDSIKG-AYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVAL 542
++GRR F +K YNL K+EHY C++D+L RAGL++EA+++V +P D + A+
Sbjct: 424 DEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKP-DVRICGAI 482
Query: 543 LGACKLHGNI-KVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNV 601
L ACK G + ++ I L +E SG YVLLSN +AA +WD+ A++R+ MK K +
Sbjct: 483 LSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGI 542
Query: 602 KKISGFSQIQ 611
K+ G S I+
Sbjct: 543 SKVPGSSYIE 552
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 150/305 (49%), Gaps = 22/305 (7%)
Query: 98 KNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISG 157
+ K +HG T K D+ Q+++V Y G NA +VF M R+ SWT +I+G
Sbjct: 124 EGKQIHGIVT--KMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITG 181
Query: 158 YFRCGRTEEALQLFDQMS-ERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTI----A 212
+ R G +EAL F +M E ++ T+ ++ + G + + L+ ++ ++
Sbjct: 182 FTRTGLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLET 241
Query: 213 WTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM----- 267
A++ Y+ Q S+ ++F E+ +++ SWN MISG + R EAI LF M
Sbjct: 242 GNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSG 301
Query: 268 --PDRNHVSWTAMVSGLAQNKMVEVAR---KYFDIMPFK-DMAAWSAMITAYVDEKLLGE 321
PD H+ T+++S A V+ R +Y K D +A++ Y +
Sbjct: 302 IKPD-GHI-LTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIET 359
Query: 322 ALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC-- 379
ALE+FN + KNV WN ++ G +G E+LR F M++ F+P + T + + +C
Sbjct: 360 ALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCH 419
Query: 380 DGMVE 384
G+V+
Sbjct: 420 TGLVD 424
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 143/350 (40%), Gaps = 62/350 (17%)
Query: 58 RNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKN------------------ 99
+N + G G+ + A K+F EMP RD VS+ +I + +
Sbjct: 144 QNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVEPN 203
Query: 100 --------------------KDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREV 139
K +HG I K S + +A++D Y K +L +A V
Sbjct: 204 LATYVCVLVSSGRVGCLSLGKGIHG--LILKRASLISLETGNALIDMYVKCEQLSDAMRV 261
Query: 140 FDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVV-----TWTTMVSGFAQNGL 194
F + +++ SW S+ISG C R++EA+ LF M S + T+++S A G
Sbjct: 262 FGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGA 321
Query: 195 VDHARRFFDLMPEKNTIAW-----TAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMIS 249
VDH R + + I W TA+V Y G ++F + +NV +WN ++
Sbjct: 322 VDHGRWVHEYILTAG-IKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLG 380
Query: 250 GCLSANRVDEAIHLFETMP----DRNHVSWTAMVSGLAQNKMVEVARKYFDIMP------ 299
G E++ FE M N V++ A ++ +V+ R+YF M
Sbjct: 381 GLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNL 440
Query: 300 FKDMAAWSAMITAYVDEKLLGEALELFNLVPEK-NVGIWNTIIDGYVRNG 348
F + + MI LL EALEL +P K +V I I+ G
Sbjct: 441 FPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRG 490
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 122/265 (46%), Gaps = 23/265 (8%)
Query: 54 SLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMS 113
SL N I + + +L +A ++F E+ ++D VS+NSMI+ + + A +F M
Sbjct: 238 SLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQ 297
Query: 114 ERDVVAQ-----SAMVDGYAKAGRLDNAREVFDNMTERNAFSW-----TSLISGYFRCGR 163
+ ++++ A G +D+ R V + + W T+++ Y +CG
Sbjct: 298 TSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILT-AGIKWDTHIGTAIVDMYAKCGY 356
Query: 164 TEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMP----EKNTIAWTAMVKS 219
E AL++F+ + ++V TW ++ G A +G + R+F+ M + N + + A + +
Sbjct: 357 IETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNA 416
Query: 220 YLDNGQFSEGYKLFLEMPER------NVRSWNVMISGCLSANRVDEAIHLFETMPDRNHV 273
G EG + F +M R + + MI A +DEA+ L + MP + V
Sbjct: 417 CCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDV 476
Query: 274 SWTAMVSGLAQNK--MVEVARKYFD 296
+ +N+ ++E+ ++ D
Sbjct: 477 RICGAILSACKNRGTLMELPKEILD 501
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 183/645 (28%), Positives = 294/645 (45%), Gaps = 94/645 (14%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVV 118
N +++ R G L +K FDE+ + D S+ ++++ K D+ A +F M ERD V
Sbjct: 96 NTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDV 155
Query: 119 A-QSAMVDGYAKAGRLDNAREVFDNM----TERNAFSWTS-------------------- 153
A +AM+ G ++G + + E+F M + F + +
Sbjct: 156 AIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSLDFGKQVHSLV 215
Query: 154 --------------LISGYFRCGRTEEALQLFDQ--MSERSVVTWTTMVSGFAQ------ 191
LI+ YF C +A +F++ ++ R VT+ ++ G A
Sbjct: 216 IKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRDES 275
Query: 192 ----NGLVDHARRFFDLM-------------------------PEKNTIAWTAMVKSYLD 222
+++ + R DL EK T+ A + Y
Sbjct: 276 LLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSS 335
Query: 223 NGQFSEGYKLFLEMPERNVRSWNVMISG------CLSANRVDEAIHLFETMPDR-NHVSW 275
F +K+F + E+++ +WN MIS SA V + +H+ PD S
Sbjct: 336 FEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSL 395
Query: 276 TAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVG 335
A L +MV+ F + +++ +A+I+AY + +A LF KN+
Sbjct: 396 LATSLDLDVLEMVQACIIKFGLSSKIEIS--NALISAYSKNGQIEKADLLFERSLRKNLI 453
Query: 336 IWNTIIDGYVRNGEAGEALRLFILMLRSCFR--PCVTTMTSIITSCDGMVEIM---QAHA 390
WN II G+ NG E L F +L S R P T++++++ C +M Q HA
Sbjct: 454 SWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHA 513
Query: 391 MVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHH 450
V+ G + T + NALI +YS+ G + +++ VF + KDVVSW ++I AY+ HG G +
Sbjct: 514 YVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGEN 573
Query: 451 ALQVFARMVTSG-TKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCL 509
A+ + M G PD TF +LSACSHAGLV +G +F+S+ + + V+H+SCL
Sbjct: 574 AVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCL 633
Query: 510 VDMLGRAGLVNEAMDVVSTIPPSEIDEAVLV--ALLGACKLHGNIKVANSIGQKLLSLEP 567
VD+LGRAG ++EA +V I I V V AL AC HG++K+ + + L+ E
Sbjct: 634 VDLLGRAGHLDEAESLVK-ISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEK 692
Query: 568 TSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQV 612
YV LSN YA W E + R+ + K G S +++
Sbjct: 693 DDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWMRL 737
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 130/564 (23%), Positives = 241/564 (42%), Gaps = 81/564 (14%)
Query: 54 SLRKRNVEITILGRRGKLKEARKLFDEM-------PQRDAVSYNSMIAVYLKNKDVHGAE 106
+L N +T L R G+ + A KLF ++ P + +VS A +L++ + G +
Sbjct: 20 TLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDT-IFGGQ 78
Query: 107 TIFKAMSERDVV---AQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGR 163
A+ + + ++ Y + G L + ++ FD + E + +SWT+L+S F+ G
Sbjct: 79 VHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGD 138
Query: 164 TEEALQLFDQMSER-SVVTWTTMVSGFAQNGLVDHARRFFDLMPE---KNTIAWTAMVKS 219
E A ++FD+M ER V W M++G ++G + + F M + ++ A + S
Sbjct: 139 IEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILS 198
Query: 220 YLDNGQFSEGYKL---------FLEMPERNVR-----SWNVMISGCLSANRVDEAIHLFE 265
D G G ++ F+ N + V++ CL D A+
Sbjct: 199 MCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAV---- 254
Query: 266 TMPDRNHVSWTAMVSGLAQ----------NKMVEVARKYFDIMPFKDMAAWS-------- 307
R+ V++ ++ GLA KM+E + + D+ M + S
Sbjct: 255 ----RDQVTFNVVIDGLAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQV 310
Query: 308 -----------------AMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEA 350
A +T Y + G A ++F + EK++ WNT+I Y +
Sbjct: 311 HGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLG 370
Query: 351 GEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITL 410
A+ ++ M +P T S++ + + + A +I G ++NALI+
Sbjct: 371 KSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISA 430
Query: 411 YSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTK--PDEI 468
YSK+G + A L+FE K+++SW A+I + ++G L+ F+ ++ S + PD
Sbjct: 431 YSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAY 490
Query: 469 TFVGLLSACSHAGLVNQGRRVFDSI--KGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVV 526
T LLS C + G + + G + L + L++M + G + +++V
Sbjct: 491 TLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLI---GNALINMYSQCGTIQNSLEVF 547
Query: 527 STIPPSEIDEAVLVALLGACKLHG 550
+ + SE D +L+ A HG
Sbjct: 548 NQM--SEKDVVSWNSLISAYSRHG 569
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 166/675 (24%), Positives = 304/675 (45%), Gaps = 102/675 (15%)
Query: 71 LKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSER----------DVVAQ 120
+A FD + +D VS+N++IA + +N + A F M + +V+
Sbjct: 174 FPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPV 233
Query: 121 SAMVDG--YAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERS 178
A +D ++GR ++ V + + + F SL+S Y R GR EEA LF +M +
Sbjct: 234 CASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKD 293
Query: 179 VVTWTTMVSGFAQNGLVDHARRFF-------DLMPEKNTI-------------------- 211
+V+W +++G+A N A + F D+ P+ TI
Sbjct: 294 LVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIH 353
Query: 212 --------------AWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISG------- 250
A++ Y G S Y F M +++ SWN ++
Sbjct: 354 SYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQ 413
Query: 251 ----------------------------CLSANRVDEA--IHLFETMPDRNHVS-----W 275
C++ + + +H + H
Sbjct: 414 FQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLG 473
Query: 276 TAMVSGLAQNKMVEVARKYF-DIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNV 334
A++ A+ VE A K F + + + +++++++ YV+ +A LF + ++
Sbjct: 474 NALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDL 533
Query: 335 GIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVE---IMQAHAM 391
W+ ++ Y + EA+ +F + RP T+ +++ C + + Q H
Sbjct: 534 TTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGY 593
Query: 392 VIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHA 451
+I G + + L+ +Y+K G L A VF+ +D+V +TAM+ YA HG G A
Sbjct: 594 IIRGGL-GDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEA 652
Query: 452 LQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVD 511
L +++ M S KPD + +L+AC HAGL+ G +++DSI+ + + +E Y+C VD
Sbjct: 653 LMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVD 712
Query: 512 MLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSG 571
++ R G +++A V+ + P E + + LL AC + + + +S+ LL E +G
Sbjct: 713 LIARGGRLDDAYSFVTQM-PVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTG 771
Query: 572 GYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEE 631
+VL+SN YAA+ +W+ ++R MK+K +KK +G S ++V G+ ++F G+ SHP+ +
Sbjct: 772 NHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDS 831
Query: 632 IYGFLQQSLQPLMRE 646
I+ L +L M+E
Sbjct: 832 IFD-LVNALYLQMKE 845
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 194/426 (45%), Gaps = 42/426 (9%)
Query: 85 DAVSYNSMIAVYLKNKDVHGAETIFK----AMSERDVVAQSAMVDGYAKAGRLDNAREVF 140
D V + ++ + +HG +FK A SE ++++ YAK R+D+ +++F
Sbjct: 26 DVVKACASVSDLTSGRALHGC--VFKLGHIACSE----VSKSVLNMYAKCRRMDDCQKMF 79
Query: 141 DNMTERNAFSWTSLISGY-FRCGRTEEALQLFDQM-----SERSVVTWTTMVS-----GF 189
M + W +++G CGR E ++ F M + S VT+ ++ G
Sbjct: 80 RQMDSLDPVVWNIVLTGLSVSCGR--ETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGD 137
Query: 190 AQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNG-QFSEGYKLFLEMPERNVRSWNVMI 248
+ NG H+ EK+T+ A+V Y G F + Y F + +++V SWN +I
Sbjct: 138 SYNGKSMHS-YIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAII 196
Query: 249 SGCLSANRVDEAIHLFETM----PDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMA 304
+G N + +A F M + N+ + ++ A R I +
Sbjct: 197 AGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQR 256
Query: 305 AW--------SAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRL 356
+W +++++ Y+ + EA LF + K++ WN +I GY N E +A +L
Sbjct: 257 SWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQL 316
Query: 357 FI-LMLRSCFRPCVTTMTSIITSCDGMVEIM---QAHAMVI-HLGFEQNTWVTNALITLY 411
F L+ + P T+ SI+ C + ++ + H+ ++ H ++T V NALI+ Y
Sbjct: 317 FHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFY 376
Query: 412 SKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFV 471
++ GD +A F L+ +KD++SW A++ A+A+ L + ++ D +T +
Sbjct: 377 ARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTIL 436
Query: 472 GLLSAC 477
LL C
Sbjct: 437 SLLKFC 442
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 129/281 (45%), Gaps = 19/281 (6%)
Query: 231 KLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEV 290
K+F +M + WN++++G LS + E + F+ M + +++ + V +
Sbjct: 77 KMFRQMDSLDPVVWNIVLTG-LSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRL 135
Query: 291 ARKY---------FDIMPFKDMAAWSAMITAYVDEKLL-GEALELFNLVPEKNVGIWNTI 340
Y KD +A+++ Y + +A F+ + +K+V WN I
Sbjct: 136 GDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAI 195
Query: 341 IDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIM------QAHAMVIH 394
I G+ N +A R F LML+ P T+ +++ C M + + Q H+ V+
Sbjct: 196 IAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQ 255
Query: 395 LGFEQ-NTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQ 453
+ Q + +V N+L++ Y + G + A +F + SKD+VSW +I YA++ A Q
Sbjct: 256 RSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQ 315
Query: 454 VFARMVTSG-TKPDEITFVGLLSACSHAGLVNQGRRVFDSI 493
+F +V G PD +T + +L C+ + G+ + I
Sbjct: 316 LFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYI 356
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 98/221 (44%), Gaps = 12/221 (5%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDA-VSYNSMIAVYLKNKDVHGAETIFKAMSERDV 117
N + + G ++ A K+F + +R VSYNS+++ Y+ + A+ +F MS D+
Sbjct: 474 NALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDL 533
Query: 118 VAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSER 177
S MV YA++ + A VF + R T I +L L Q
Sbjct: 534 TTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGY 593
Query: 178 -------SVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGY 230
+ T++ +A+ G + HA F ++ + +TAMV Y +G+ E
Sbjct: 594 IIRGGLGDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEAL 653
Query: 231 KLFLEMPERNVRSWNV----MISGCLSANRVDEAIHLFETM 267
++ M E N++ +V M++ C A + + + +++++
Sbjct: 654 MIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSI 694
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 170/606 (28%), Positives = 288/606 (47%), Gaps = 56/606 (9%)
Query: 76 KLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSER-----DVVAQSAMVDGYAKA 130
KLFDE+PQRD S+N++++ +K H A +F M+ D S ++ +
Sbjct: 239 KLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDS 298
Query: 131 GRLDNAREVFDNMTERNAFSWTS----LISGYFRCGRTEEALQLFDQMSERSVVTWTTMV 186
L RE+ S LI Y + ++ L++ M + VT+T M+
Sbjct: 299 SVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMI 358
Query: 187 SGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNV 246
+ + G+VD A F + EKNTI + A++ + NG + KLF +M +R V +
Sbjct: 359 TAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDF 418
Query: 247 MIS------GCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPF 300
++ G +S +V E IH F + G A N ++ A
Sbjct: 419 SLTSAVDACGLVSEKKVSEQIHGF------------CIKFGTAFNPCIQTA--------L 458
Query: 301 KDMAAWSAMITAYVDEKLLGEALELFNLVPEK--NVGIWNTIIDGYVRNGEAGEALRLF- 357
DM + + +A E+F+ P + +II GY RNG +A+ LF
Sbjct: 459 LDMCTRC---------ERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFH 509
Query: 358 -ILMLRSCFRPCVTTMTSIITSCD--GMVEI-MQAHAMVIHLGFEQNTWVTNALITLYSK 413
L + F V+ +T I+ C G E+ Q H + G+ + + N+LI++Y+K
Sbjct: 510 RTLCEQKLFLDEVS-LTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAK 568
Query: 414 SGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGL 473
D A+ +F ++ DV+SW ++I Y +G AL +++RM KPD IT +
Sbjct: 569 CCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLV 628
Query: 474 LSA--CSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPP 531
+SA + + ++ R +F S+K Y++ EHY+ V +LG GL+ EA D ++++P
Sbjct: 629 ISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMP- 687
Query: 532 SEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQ 591
+ + +VL ALL +C++H N VA + + +LS +P + Y+L SN Y+A W
Sbjct: 688 VQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEM 747
Query: 592 VRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTP 651
+R+ M+E+ +K S I + K H F + SHPQ ++IY L+ + ++ GY P
Sbjct: 748 IREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEILIMECLK-VGYEP 806
Query: 652 ENSLLI 657
++
Sbjct: 807 NTEYVL 812
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 116/492 (23%), Positives = 215/492 (43%), Gaps = 69/492 (14%)
Query: 99 NKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGY 158
K VH + F + E +A++ Y K G A VF +++ S+T+LISG+
Sbjct: 99 TKAVHAS---FLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGF 155
Query: 159 FRCGRTEEALQLFDQMSERSVV-----TWTTMVSGFAQNGLVDHARRFFDLMPEK---NT 210
R EAL++F +M + +V T+ +++ + + L+ + N+
Sbjct: 156 SRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNS 215
Query: 211 IAWTAMVKSYLDNGQFS---EGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM 267
+ + + S D S + KLF E+P+R+V SWN ++S + + +A LF M
Sbjct: 216 VFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEM 275
Query: 268 PDRNHV------SWT-----------------------AMVSGLAQ-----NKMVEVARK 293
N V S+T A+ GL Q N ++ K
Sbjct: 276 ---NRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSK 332
Query: 294 YFD---------IMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGY 344
++D +M +D ++ MITAY+ ++ A+E+F V EKN +N ++ G+
Sbjct: 333 FWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGF 392
Query: 345 VRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIM---QAHAMVIHLGFEQNT 401
RNG +AL+LF ML+ ++TS + +C + E Q H I G N
Sbjct: 393 CRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNP 452
Query: 402 WVTNALITLYSKSGDLCSAMLVFELLKSK--DVVSWTAMIVAYANHGHGHHALQVFAR-M 458
+ AL+ + ++ + A +F+ S + T++I YA +G A+ +F R +
Sbjct: 453 CIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTL 512
Query: 459 VTSGTKPDEITFVGLLSACSHAGLVNQGRRVFD-SIKGAYNLNLKVEHYSCLVDMLGRAG 517
DE++ +L+ C G G ++ ++K Y ++ + + L+ M +
Sbjct: 513 CEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGN--SLISMYAKCC 570
Query: 518 LVNEAMDVVSTI 529
++A+ + +T+
Sbjct: 571 DSDDAIKIFNTM 582
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Query: 383 VEIMQA-HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVA 441
VE+ +A HA + L E+ T + NALI+ Y K G A+LVF L S VVS+TA+I
Sbjct: 96 VEVTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISG 154
Query: 442 YANHGHGHHALQVFARMVTSG-TKPDEITFVGLLSAC 477
++ AL+VF RM +G +P+E TFV +L+AC
Sbjct: 155 FSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTAC 191
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 222 bits (565), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 118/335 (35%), Positives = 197/335 (58%), Gaps = 6/335 (1%)
Query: 302 DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILML 361
D+ S+++ Y D + A ++F +PE+NV W +I G+ + L+L+ M
Sbjct: 154 DVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMR 213
Query: 362 RSCFRPCVTTMTSIITSCDGMVEIMQA---HAMVIHLGFEQNTWVTNALITLYSKSGDLC 418
+S P T T+++++C G + Q H +H+G + ++N+LI++Y K GDL
Sbjct: 214 KSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLK 273
Query: 419 SAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMV-TSGTKPDEITFVGLLSAC 477
A +F+ +KDVVSW +MI YA HG A+++F M+ SGTKPD IT++G+LS+C
Sbjct: 274 DAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSC 333
Query: 478 SHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEA 537
HAGLV +GR+ F+ + + L ++ HYSCLVD+LGR GL+ EA++++ +P + +
Sbjct: 334 RHAGLVKEGRKFFN-LMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPM-KPNSV 391
Query: 538 VLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMK 597
+ +LL +C++HG++ ++ L LEP + +V L+N YA+ W E A VRK MK
Sbjct: 392 IWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMK 451
Query: 598 EKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEI 632
+K +K G S I++ +F + S+ ++ EI
Sbjct: 452 DKGLKTNPGCSWIEINNYVFMFKAEDGSNCRMLEI 486
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 116/229 (50%), Gaps = 18/229 (7%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIF----KAMSERDVVAQSAMV 124
G+++ A K+F+EMP+R+ VS+ +MI+ + + V ++ K+ S+ + +A++
Sbjct: 169 GEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALL 228
Query: 125 DGYAKAGRLDNAREVFDNMTERNAFSW----TSLISGYFRCGRTEEALQLFDQMSERSVV 180
+G L R V S+ SLIS Y +CG ++A ++FDQ S + VV
Sbjct: 229 SACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVV 288
Query: 181 TWTTMVSGFAQNGLVDHARRFFDLMPEK-----NTIAWTAMVKSYLDNGQFSEGYKLFLE 235
+W +M++G+AQ+GL A F+LM K + I + ++ S G EG K F
Sbjct: 289 SWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNL 348
Query: 236 MPERNVRS----WNVMISGCLSANRVDEAIHLFETMPDR-NHVSWTAMV 279
M E ++ ++ ++ + EA+ L E MP + N V W +++
Sbjct: 349 MAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 126/248 (50%), Gaps = 17/248 (6%)
Query: 214 TAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM----PD 269
+++V Y D+G+ YK+F EMPERNV SW MISG RVD + L+ M D
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSD 218
Query: 270 RNHVSWTAMVS------GLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEAL 323
N ++TA++S L Q + V + + + ++ +++I+ Y L +A
Sbjct: 219 PNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHIS--NSLISMYCKCGDLKDAF 276
Query: 324 ELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILML-RSCFRPCVTTMTSIITSCD-- 380
+F+ K+V WN++I GY ++G A +A+ LF LM+ +S +P T +++SC
Sbjct: 277 RIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHA 336
Query: 381 GMV-EIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSK-DVVSWTAM 438
G+V E + ++ G + + L+ L + G L A+ + E + K + V W ++
Sbjct: 337 GLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSL 396
Query: 439 IVAYANHG 446
+ + HG
Sbjct: 397 LFSCRVHG 404
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 127/260 (48%), Gaps = 22/260 (8%)
Query: 116 DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQM- 174
DV S++V Y +G ++NA +VF+ M ERN SWT++ISG+ + R + L+L+ +M
Sbjct: 154 DVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMR 213
Query: 175 ---SERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAW----TAMVKSYLDNGQFS 227
S+ + T+T ++S +G + R ++ +++ Y G
Sbjct: 214 KSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLK 273
Query: 228 EGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM-------PDRNHVSWTAMVS 280
+ +++F + ++V SWN MI+G +AI LFE M PD +++ ++S
Sbjct: 274 DAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDA--ITYLGVLS 331
Query: 281 GLAQNKMVEVARKYFDIMP----FKDMAAWSAMITAYVDEKLLGEALELFNLVPEK-NVG 335
+V+ RK+F++M ++ +S ++ LL EALEL +P K N
Sbjct: 332 SCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSV 391
Query: 336 IWNTIIDGYVRNGEAGEALR 355
IW +++ +G+ +R
Sbjct: 392 IWGSLLFSCRVHGDVWTGIR 411
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 81/150 (54%), Gaps = 9/150 (6%)
Query: 389 HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHG 448
H + + GF + ++ ++L+ LY SG++ +A VFE + ++VVSWTAMI +A
Sbjct: 143 HCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRV 202
Query: 449 HHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHY-- 506
L+++++M S + P++ TF LLSAC+ +G + QGR V L++ ++ Y
Sbjct: 203 DICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVH-----CQTLHMGLKSYLH 257
Query: 507 --SCLVDMLGRAGLVNEAMDVVSTIPPSEI 534
+ L+ M + G + +A + ++
Sbjct: 258 ISNSLISMYCKCGDLKDAFRIFDQFSNKDV 287
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 10/138 (7%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAM-----S 113
N I++ + G LK+A ++FD+ +D VS+NSMIA Y ++ A +F+ M +
Sbjct: 260 NSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGT 319
Query: 114 ERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFS----WTSLISGYFRCGRTEEALQ 169
+ D + ++ AG + R+ F+ M E ++ L+ R G +EAL+
Sbjct: 320 KPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALE 379
Query: 170 LFDQMSER-SVVTWTTMV 186
L + M + + V W +++
Sbjct: 380 LIENMPMKPNSVIWGSLL 397
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 222 bits (565), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 138/422 (32%), Positives = 225/422 (53%), Gaps = 22/422 (5%)
Query: 232 LFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLA---- 283
L L + +WN++ G S++ E+I ++ M R N +++ ++ A
Sbjct: 69 LLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLG 128
Query: 284 ----QNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNT 339
+ VEV + FD D+ + +I Y K +A ++F+ + E+NV WN+
Sbjct: 129 LTAGRQIQVEVLKHGFDF----DVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNS 184
Query: 340 IIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQ-AHAMVIHLGFE 398
I+ V NG+ F M+ F P TTM ++++C G + + + H+ V+ E
Sbjct: 185 IMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELE 244
Query: 399 QNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARM 458
N + AL+ +Y+KSG L A LVFE + K+V +W+AMIV A +G ALQ+F++M
Sbjct: 245 LNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKM 304
Query: 459 VT-SGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAG 517
+ S +P+ +TF+G+L ACSH GLV+ G + F ++ + + + HY +VD+LGRAG
Sbjct: 305 MKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAG 364
Query: 518 LVNEAMDVVSTIPPSEIDEAVLVALLGACKLH---GNIKVANSIGQKLLSLEPTSSGGYV 574
+NEA D + + P E D V LL AC +H + + + ++L+ LEP SG V
Sbjct: 365 RLNEAYDFIKKM-PFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLV 423
Query: 575 LLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYG 634
+++N +A W E A+VR+ MKE +KKI+G S +++ G H FF G + IY
Sbjct: 424 IVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYE 483
Query: 635 FL 636
L
Sbjct: 484 LL 485
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 129/275 (46%), Gaps = 55/275 (20%)
Query: 52 DWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVH-------- 103
D+ + N I + G K +ARK+FDEM +R+ VS+NS++ ++N ++
Sbjct: 145 DFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCE 204
Query: 104 ---------------------GAETIFKAMSERDVVAQ--------SAMVDGYAKAGRLD 134
G ++ K + + +V + +A+VD YAK+G L+
Sbjct: 205 MIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLE 264
Query: 135 NAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERS-----VVTWTTMVSGF 189
AR VF+ M ++N ++W+++I G + G EEALQLF +M + S VT+ ++
Sbjct: 265 YARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCAC 324
Query: 190 AQNGLVDHARRFFDLMPEKNTIA-----WTAMVKSYLDNGQFSEGYKLFLEMP-ERNVRS 243
+ GLVD ++F M + + I + AMV G+ +E Y +MP E +
Sbjct: 325 SHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVV 384
Query: 244 WNVMISGC-LSANRVDEAI------HLFETMPDRN 271
W ++S C + + DE I L E P R+
Sbjct: 385 WRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRS 419
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 106/248 (42%), Gaps = 23/248 (9%)
Query: 116 DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQM- 174
DV + ++ Y + +AR+VFD MTERN SW S+++ G+ + F +M
Sbjct: 147 DVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMI 206
Query: 175 ------SERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSE 228
E ++V + G G + H++ + E N TA+V Y +G
Sbjct: 207 GKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVREL-ELNCRLGTALVDMYAKSGGLEY 265
Query: 229 GYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDR-----NHVSWTAMVSGLA 283
+F M ++NV +W+ MI G +EA+ LF M N+V++ ++ +
Sbjct: 266 ARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACS 325
Query: 284 QNKMVEVARKYF-------DIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVP-EKNVG 335
+V+ KYF I P M + AM+ L EA + +P E +
Sbjct: 326 HTGLVDDGYKYFHEMEKIHKIKPM--MIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAV 383
Query: 336 IWNTIIDG 343
+W T++
Sbjct: 384 VWRTLLSA 391
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/404 (20%), Positives = 159/404 (39%), Gaps = 100/404 (24%)
Query: 102 VHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRC 161
+HG + ++ ++++ V + A L AR + + ++ +W L GY
Sbjct: 32 IHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSS 91
Query: 162 GRTEEALQLFDQMSERSV--------------VTWTTMVSG----------------FAQ 191
E++ ++ +M R + ++ + +G +
Sbjct: 92 DSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVG 151
Query: 192 NGLV---------DHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPER--- 239
N L+ AR+ FD M E+N ++W +++ + ++NG+ + ++ F EM +
Sbjct: 152 NNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFC 211
Query: 240 -NVRSWNVMISGCLSANRVDEAIH--LFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFD 296
+ + V++S C + + +H + + N TA+V A++ +E AR F+
Sbjct: 212 PDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFE 271
Query: 297 IMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRL 356
M K++ WSAMI G + G A EAL+L
Sbjct: 272 RMVDKNVWTWSAMIV-------------------------------GLAQYGFAEEALQL 300
Query: 357 FILMLR-SCFRPCVTTMTSIITSC-------DG------MVEIMQAHAMVIHLGFEQNTW 402
F M++ S RP T ++ +C DG M +I + M+IH G
Sbjct: 301 FSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYG------ 354
Query: 403 VTNALITLYSKSGDLCSAM-LVFELLKSKDVVSWTAMIVAYANH 445
A++ + ++G L A + ++ D V W ++ A + H
Sbjct: 355 ---AMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIH 395
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 146/513 (28%), Positives = 259/513 (50%), Gaps = 27/513 (5%)
Query: 123 MVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV--- 179
++D Y K G + +AR++FD +++R+ SWT++IS + RCG +AL LF +M V
Sbjct: 53 LIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKAN 112
Query: 180 -VTWTTMVSGFAQNGLVDHARRFFDLMPEKNT----IAWTAMVKSYLDNGQFSEGYKLFL 234
T+ +++ G + + + + N I +A++ Y G+ E F
Sbjct: 113 QFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFD 172
Query: 235 EMPERNVRSWNVMISGCLSANRVDEAIHLFETM------PDRNHVSWTAMVSGLAQNKMV 288
M ER++ SWN MI G + D + LF+ M PD ++ +++ K +
Sbjct: 173 SMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPD--CFTFGSLLRASIVVKCL 230
Query: 289 EVARKYFDI---MPF-KDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGY 344
E+ + + + F + A +++ AYV L A +L ++++ +I G+
Sbjct: 231 EIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGF 290
Query: 345 VR-NGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIM---QAHAMVIHLG-FEQ 399
+ N +A +F M+R + ++S++ C + + Q H +
Sbjct: 291 SQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRF 350
Query: 400 NTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMV 459
+ + N+LI +Y+KSG++ A+L FE +K KDV SWT++I Y HG+ A+ ++ RM
Sbjct: 351 DVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRME 410
Query: 460 TSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLV 519
KP+++TF+ LLSACSH G G +++D++ + + + EH SC++DML R+G +
Sbjct: 411 HERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYL 470
Query: 520 NEAMDVV-STIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSN 578
EA ++ S + + A L AC+ HGN++++ +LLS+EP Y+ L++
Sbjct: 471 EEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLAS 530
Query: 579 AYAAEEQWDEFAQVRKRMKEK-NVKKISGFSQI 610
YAA WD RK MKE + K G+S +
Sbjct: 531 VYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 201/461 (43%), Gaps = 70/461 (15%)
Query: 54 SLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMS 113
+L+ +++ I + ++G +K ARKLFD + +RD VS+ +MI+ + + A +FK M
Sbjct: 46 NLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMH 105
Query: 114 ERDV---------------------------------------VAQSAMVDGYAKAGRLD 134
DV + +SA++ YA+ G+++
Sbjct: 106 REDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKME 165
Query: 135 NAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQM----SERSVVTWTTMVSGFA 190
AR FD+M ER+ SW ++I GY + + LF M + T+ +++
Sbjct: 166 EARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASI 225
Query: 191 QNGLVDHARRFFDLMPE----KNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNV 246
++ L + +++ ++V +Y+ G + +KL +R++ S
Sbjct: 226 VVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTA 285
Query: 247 MISGCLSANR-VDEAIHLFETM----PDRNHVSWTAMVSGLAQNKMVEVARKY--FDIMP 299
+I+G N +A +F+ M + V ++M+ V + R+ F +
Sbjct: 286 LITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKS 345
Query: 300 FK---DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRL 356
+ D+A +++I Y + +A+ F + EK+V W ++I GY R+G +A+ L
Sbjct: 346 SQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDL 405
Query: 357 FILMLRSCFRPCVTTMTSIITSCD--GMVEIMQA--HAMVIHLGFEQNTWVTNALITLYS 412
+ M +P T S++++C G E+ M+ G E + +I + +
Sbjct: 406 YNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLA 465
Query: 413 KSGDLCSAMLVFELLKSKDVV------SWTAMIVAYANHGH 447
+SG L A + L++SK+ + +W A + A HG+
Sbjct: 466 RSGYLEEA---YALIRSKEGIVSLSSSTWGAFLDACRRHGN 503
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 3/140 (2%)
Query: 384 EIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYA 443
+++ H I GF N + + LI LY K GD+ A +F+ + +DVVSWTAMI ++
Sbjct: 30 QLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFS 89
Query: 444 NHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSI-KGAYNLNLK 502
G+ AL +F M K ++ T+ +L +C G + +G ++ S+ KG NL
Sbjct: 90 RCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLI 149
Query: 503 VEHYSCLVDMLGRAGLVNEA 522
V S L+ + R G + EA
Sbjct: 150 VR--SALLSLYARCGKMEEA 167
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 100/224 (44%), Gaps = 20/224 (8%)
Query: 79 DEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSER-DVVAQSAMVDGYAKAGRLDNAR 137
DE+ + + IA + +HG K+ R DV ++++D YAK+G +++A
Sbjct: 315 DEVVVSSMLKICTTIASVTIGRQIHGFA--LKSSQIRFDVALGNSLIDMYAKSGEIEDAV 372
Query: 138 EVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNG 193
F+ M E++ SWTSLI+GY R G E+A+ L+++M + VT+ +++S + G
Sbjct: 373 LAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTG 432
Query: 194 LVDHARRFFDLMPEKNTIA-----WTAMVKSYLDNGQFSEGYKLFLE---MPERNVRSWN 245
+ + +D M K+ I + ++ +G E Y L + + +W
Sbjct: 433 QTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWG 492
Query: 246 VMISGCLSANRVD----EAIHLFETMPDRNHVSWTAMVSGLAQN 285
+ C V A L P R V++ + S A N
Sbjct: 493 AFLDACRRHGNVQLSKVAATQLLSMEP-RKPVNYINLASVYAAN 535
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 144/473 (30%), Positives = 249/473 (52%), Gaps = 27/473 (5%)
Query: 207 EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFET 266
EKN++ T ++++ + G ++F EM + + WN + G + E++ L++
Sbjct: 41 EKNSL-LTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKK 99
Query: 267 MPD----RNHVSWTAMVSGLAQ--------NKMVEVARKYFDIMPFKDMAAWSAMITAYV 314
M D + ++ +V ++Q V + F + + ++ Y+
Sbjct: 100 MRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGI----VATELVMMYM 155
Query: 315 DEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTS 374
L A LF + K++ WN + V+ G + AL F M + T+ S
Sbjct: 156 KFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVS 215
Query: 375 IITSCD--GMVEI-MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKD 431
++++C G +EI + + + N V NA + ++ K G+ +A ++FE +K ++
Sbjct: 216 MLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRN 275
Query: 432 VVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFD 491
VVSW+ MIV YA +G AL +F M G +P+ +TF+G+LSACSHAGLVN+G+R F
Sbjct: 276 VVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFS 335
Query: 492 SIKGAYNLNL--KVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLH 549
+ + + NL + EHY+C+VD+LGR+GL+ EA + + + P E D + ALLGAC +H
Sbjct: 336 LMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKM-PVEPDTGIWGALLGACAVH 394
Query: 550 GNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQ 609
++ + + L+ P +VLLSN YAA +WD +VR +M++ KK++ +S
Sbjct: 395 RDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSS 454
Query: 610 IQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPENSLLIDTFHN 662
++ +GK H F G++SHPQ + IY L + L+ + R+ GY P+ FH+
Sbjct: 455 VEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKI-RKMGYVPDTC---SVFHD 503
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 141/334 (42%), Gaps = 63/334 (18%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDV----------- 117
G + AR++FDEM + +N++ Y++N+ + ++K M + V
Sbjct: 57 GDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVV 116
Query: 118 ----------------------------VAQSAMVDGYAKAGRLDNAREVFDNMTERNAF 149
+ + +V Y K G L +A +F++M ++
Sbjct: 117 KAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLV 176
Query: 150 SWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHARRFFDLM 205
+W + ++ + G + AL+ F++M +V T +M+S Q G ++ +D
Sbjct: 177 AWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRA 236
Query: 206 PEK----NTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAI 261
++ N I A + +L G LF EM +RNV SW+ MI G EA+
Sbjct: 237 RKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREAL 296
Query: 262 HLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIM---------PFKDMAAWSA 308
LF TM + N+V++ ++S + +V ++YF +M P K+ ++
Sbjct: 297 TLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKE--HYAC 354
Query: 309 MITAYVDEKLLGEALELFNLVP-EKNVGIWNTII 341
M+ LL EA E +P E + GIW ++
Sbjct: 355 MVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALL 388
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 24/269 (8%)
Query: 131 GRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMV 186
G + AR+VFD M + F W +L GY R E+L L+ +M + V T+ +V
Sbjct: 57 GDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVV 116
Query: 187 SGFAQNG-------LVDHARRF-FDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPE 238
+Q G L H ++ F + I T +V Y+ G+ S LF M
Sbjct: 117 KAISQLGDFSCGFALHAHVVKYGFGCL----GIVATELVMMYMKFGELSSAEFLFESMQV 172
Query: 239 RNVRSWNVMISGCLSANRVDEAIHLFETMP----DRNHVSWTAMVSGLAQNKMVEVARKY 294
+++ +WN ++ C+ A+ F M + + +M+S Q +E+ +
Sbjct: 173 KDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEI 232
Query: 295 FDIMPFKDMAAWSAMITAYVDEKLLGEALE----LFNLVPEKNVGIWNTIIDGYVRNGEA 350
+D +++ + A +D L E LF + ++NV W+T+I GY NG++
Sbjct: 233 YDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDS 292
Query: 351 GEALRLFILMLRSCFRPCVTTMTSIITSC 379
EAL LF M RP T ++++C
Sbjct: 293 REALTLFTTMQNEGLRPNYVTFLGVLSAC 321
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 126/300 (42%), Gaps = 61/300 (20%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMS--------------- 113
G+L A LF+ M +D V++N+ +AV ++ + A F M
Sbjct: 158 GELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSML 217
Query: 114 ------------------------ERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAF 149
+ +++ ++A +D + K G + AR +F+ M +RN
Sbjct: 218 SACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVV 277
Query: 150 SWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHARRFFDLM 205
SW+++I GY G + EAL LF M + VT+ ++S + GLV+ +R+F LM
Sbjct: 278 SWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLM 337
Query: 206 PEKNTI-------AWTAMVKSYLDNGQFSEGYKLFLEMP-ERNVRSWNVMISGC------ 251
+ N + MV +G E Y+ +MP E + W ++ C
Sbjct: 338 VQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDM 397
Query: 252 LSANRVDEAIHLFETMPD--RNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAM 309
+ +V + L ET PD HV + + + + V+ R + K +AA+S++
Sbjct: 398 ILGQKVADV--LVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSV 455
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 112/265 (42%), Gaps = 68/265 (25%)
Query: 92 MIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNM----TERN 147
++ +Y+K ++ AE +F++M +D+VA +A + + G A E F+ M + +
Sbjct: 150 LVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFD 209
Query: 148 AFSWTSLISG-----------------------------------YFRCGRTEEALQLFD 172
+F+ S++S + +CG TE A LF+
Sbjct: 210 SFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFE 269
Query: 173 QMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFSE 228
+M +R+VV+W+TM+ G+A NG A F M + N + + ++ + G +E
Sbjct: 270 EMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNE 329
Query: 229 GYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMV 288
G + F M + N ++ P + H + MV L ++ ++
Sbjct: 330 GKRYFSLMVQSNDKNLE----------------------PRKEH--YACMVDLLGRSGLL 365
Query: 289 EVARKYFDIMPFK-DMAAWSAMITA 312
E A ++ MP + D W A++ A
Sbjct: 366 EEAYEFIKKMPVEPDTGIWGALLGA 390
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 133/472 (28%), Positives = 241/472 (51%), Gaps = 40/472 (8%)
Query: 193 GLVDHARRFFD-LMPEKNTIAWTAMVKSYLD-----NGQFSEGYKLFLEMPERNVRSWNV 246
G + HA+ FD + +T W +++ + + N L + ++ ++N
Sbjct: 53 GSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNF 112
Query: 247 MISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIMPFKD 302
+ C + + + + ++ + + T++V + N VE+A K FD MP +D
Sbjct: 113 ALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRD 172
Query: 303 MAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLR 362
+ +W+ MI + L +AL ++ K +G G G++ L + +L
Sbjct: 173 LVSWNVMICCFSHVGLHNQALSMY-----KRMG----------NEGVCGDSYTL-VALLS 216
Query: 363 SCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAML 422
SC M ++ H + + E +V+NALI +Y+K G L +A+
Sbjct: 217 SCAHVSALNMGVML------------HRIACDIRCESCVFVSNALIDMYAKCGSLENAIG 264
Query: 423 VFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGL 482
VF ++ +DV++W +MI+ Y HGHG A+ F +MV SG +P+ ITF+GLL CSH GL
Sbjct: 265 VFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGL 324
Query: 483 VNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVAL 542
V +G F+ + ++L V+HY C+VD+ GRAG + +++++ E D + L
Sbjct: 325 VKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHE-DPVLWRTL 383
Query: 543 LGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVK 602
LG+CK+H N+++ +KL+ LE ++G YVL+++ Y+A FA +RK ++ +++
Sbjct: 384 LGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQ 443
Query: 603 KISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPENS 654
+ G+S I++ + H F V ++ HP+ IY L + + + GY PE+S
Sbjct: 444 TVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAIL-AGYKPEDS 494
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 88/196 (44%), Gaps = 12/196 (6%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQS----AMV 124
G ++ A K+FDEMP RD VS+N MI + + A +++K M V S A++
Sbjct: 156 GSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALL 215
Query: 125 DGYAKAGRLDNA----REVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVV 180
A L+ R D E F +LI Y +CG E A+ +F+ M +R V+
Sbjct: 216 SSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVL 275
Query: 181 TWTTMVSGFAQNGLVDHARRFFDLM----PEKNTIAWTAMVKSYLDNGQFSEGYKLFLEM 236
TW +M+ G+ +G A FF M N I + ++ G EG + F M
Sbjct: 276 TWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIM 335
Query: 237 PERNVRSWNVMISGCL 252
+ + NV GC+
Sbjct: 336 SSQFHLTPNVKHYGCM 351
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 129/305 (42%), Gaps = 30/305 (9%)
Query: 75 RKLFDEMPQRDAVSYN------SMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYA 128
R L + + D ++N I K ++HG ++ ++ D + +++V Y+
Sbjct: 96 RMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHG--SVIRSGFLDDAIVATSLVRCYS 153
Query: 129 KAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVV----TWTT 184
G ++ A +VFD M R+ SW +I + G +AL ++ +M V T
Sbjct: 154 ANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVA 213
Query: 185 MVSGFAQ-----NGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPER 239
++S A G++ H R D+ E A++ Y G +F M +R
Sbjct: 214 LLSSCAHVSALNMGVMLH-RIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKR 272
Query: 240 NVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYF 295
+V +WN MI G EAI F M N +++ ++ G + +V+ ++F
Sbjct: 273 DVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHF 332
Query: 296 DIMPFK-----DMAAWSAMITAYVDEKLLGEALEL-FNLVPEKNVGIWNTIIDGYV--RN 347
+IM + ++ + M+ Y L +LE+ + ++ +W T++ RN
Sbjct: 333 EIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRN 392
Query: 348 GEAGE 352
E GE
Sbjct: 393 LELGE 397
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 219 bits (558), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 172/652 (26%), Positives = 300/652 (46%), Gaps = 77/652 (11%)
Query: 29 VFSQCQPIFRF-LRNFTASISISHDWSLRKRNVEITIL---GRRGKLKEARKLFDEMPQR 84
V S C + F + F + + H R V + + + G L++A +FDEMP R
Sbjct: 131 VVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDR 190
Query: 85 DAVSYNSMIAVYLKNKDVHGA----------------------ETIFKAMSERDVV---- 118
D V++ ++I+ +++N + G E F+A S +
Sbjct: 191 DVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGR 250
Query: 119 ----------------AQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCG 162
QS+M Y+K+G A F + + + FSWTS+I+ R G
Sbjct: 251 CLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSG 310
Query: 163 RTEEALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWT 214
EE+ +F +M + + V + +++ + LV + F + ++
Sbjct: 311 DMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCN 370
Query: 215 AMVKSYLDNGQFSEGYKLFLEMPER-NVRSWNVMISGCLSANRVDEAIHLFETMPDR--- 270
+++ Y S KLF + E N +WN M+ G + I LF + +
Sbjct: 371 SLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIE 430
Query: 271 -NHVSWTAMVSG--------LAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGE 321
+ S T+++S L ++ V + D+ ++ +++I Y L
Sbjct: 431 IDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLT----ISVVNSLIDLYGKMGDLTV 486
Query: 322 ALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC-- 379
A +F + NV WN +I YV ++ +A+ LF M+ F+P T+ +++ +C
Sbjct: 487 AWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVN 545
Query: 380 DGMVEIMQA-HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAM 438
G +E Q H + E N ++ ALI +Y+K G L + +F+ KD V W M
Sbjct: 546 TGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVM 605
Query: 439 IVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYN 498
I Y HG A+ +F +M S KP TF+ LLSAC+HAGLV QG+++F + Y+
Sbjct: 606 ISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMH-QYD 664
Query: 499 LNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSI 558
+ ++HYSCLVD+L R+G + EA V ++P S D + LL +C HG ++ +
Sbjct: 665 VKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSP-DGVIWGTLLSSCMTHGEFEMGIRM 723
Query: 559 GQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQI 610
++ ++ +P + G Y++L+N Y+A +W+E + R+ M+E V K +G S +
Sbjct: 724 AERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 142/628 (22%), Positives = 267/628 (42%), Gaps = 82/628 (13%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAM----SERDV 117
I+ GK + ++F + +RD +NS+I + N D + F +M D
Sbjct: 66 ISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDH 125
Query: 118 VAQSAMVDGYAK-----AGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFD 172
+V A+ G + + +RN S + Y +CG ++A +FD
Sbjct: 126 FTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFD 185
Query: 173 QMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPE------------------------- 207
+M +R VV WT ++SG QNG + + M
Sbjct: 186 EMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGA 245
Query: 208 ------------KNTIAWTAMVKS-----YLDNGQFSEGYKLFLEMPERNVRSWNVMISG 250
KN +A + V+S Y +G SE Y F E+ + ++ SW +I+
Sbjct: 246 LKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIAS 305
Query: 251 CLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVE--------VARKYFDIM 298
+ ++E+ +F M ++ + V + +++ L + +V V R F +
Sbjct: 306 LARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSL- 364
Query: 299 PFKDMAAWSAMITAYVDEKLLGEALELFNLVPEK-NVGIWNTIIDGYVRNGEAGEALRLF 357
D +++++ Y +LL A +LF + E+ N WNT++ GY + + + LF
Sbjct: 365 ---DSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELF 421
Query: 358 ILMLRSCFRPCVTTMTSIITSCDGMVEIM---QAHAMVIHLGFEQNTWVTNALITLYSKS 414
+ + TS+I+SC + ++ H V+ + V N+LI LY K
Sbjct: 422 RKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKM 481
Query: 415 GDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLL 474
GDL A +F +V++W AMI +Y + A+ +F RMV+ KP IT V LL
Sbjct: 482 GDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLL 540
Query: 475 SACSHAGLVNQGRRVFDSI-KGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSE 533
AC + G + +G+ + I + + +NL + + L+DM + G + ++ ++ ++
Sbjct: 541 MACVNTGSLERGQMIHRYITETEHEMNLSLS--AALIDMYAKCGHLEKSRELFDA--GNQ 596
Query: 534 IDEAVLVALLGACKLHGNIKVANSIGQKL--LSLEPTSSGGYVLLS---NAYAAEEQWDE 588
D ++ +HG+++ A ++ ++ ++PT LLS +A E+
Sbjct: 597 KDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKL 656
Query: 589 FAQVRKRMKEKNVKKISGFSQIQVKGKN 616
F ++ + + N+K S + + N
Sbjct: 657 FLKMHQYDVKPNLKHYSCLVDLLSRSGN 684
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 142/340 (41%), Gaps = 47/340 (13%)
Query: 163 RTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLD 222
R AL + +SE V + ++S +A G + + R F L+ ++ W +++K++
Sbjct: 44 RKHNALIITGGLSENIFVA-SKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFS 102
Query: 223 NGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGL 282
NG ++ F M ++SG PD H + +VS
Sbjct: 103 NGDYARSLCFFFSM----------LLSG---------------QSPD--HFTAPMVVSAC 135
Query: 283 AQNKMVEVA---------RKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKN 333
A+ V FD ++ A ++ + Y L +A +F+ +P+++
Sbjct: 136 AELLWFHVGTFVHGLVLKHGGFD----RNTAVGASFVYFYSKCGFLQDACLVFDEMPDRD 191
Query: 334 VGIWNTIIDGYVRNGEAGEALRLFILMLRS---CFRPCVTTMTSIITSCDGMVEIMQA-- 388
V W II G+V+NGE+ L M + +P T+ +C + + +
Sbjct: 192 VVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRC 251
Query: 389 -HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGH 447
H + G + +V +++ + YSKSG+ A L F L +D+ SWT++I + A G
Sbjct: 252 LHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGD 311
Query: 448 GHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGR 487
+ +F M G PD + L++ LV QG+
Sbjct: 312 MEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGK 351
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 5/155 (3%)
Query: 383 VEIMQAH-AMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVA 441
+E ++ H A++I G +N +V + LI+ Y+ G + VF L+ +D+ W ++I A
Sbjct: 40 LESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKA 99
Query: 442 YANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSI--KGAYNL 499
+ ++G +L F M+ SG PD T ++SAC+ + G V + G ++
Sbjct: 100 HFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDR 159
Query: 500 NLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEI 534
N V + V + G + +A V +P ++
Sbjct: 160 NTAVG--ASFVYFYSKCGFLQDACLVFDEMPDRDV 192
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 219 bits (558), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 108/330 (32%), Positives = 196/330 (59%), Gaps = 7/330 (2%)
Query: 288 VEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRN 347
++ A + FD P +D+ ++ +I V + + A ELF+ +P +++ WN++I GY +
Sbjct: 168 IDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQM 227
Query: 348 GEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQ---NTWVT 404
EA++LF M+ +P + S +++C + + A+ + ++ ++++
Sbjct: 228 NHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLA 287
Query: 405 NALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTK 464
L+ Y+K G + +AM +FEL K + +W AMI A HG+G + F +MV+SG K
Sbjct: 288 TGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIK 347
Query: 465 PDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMD 524
PD +TF+ +L CSH+GLV++ R +FD ++ Y++N +++HY C+ D+LGRAGL+ EA +
Sbjct: 348 PDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAE 407
Query: 525 VVSTIPPSEIDEAVLVA---LLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYA 581
++ +P + L+A LLG C++HGNI++A ++ +L P G Y ++ YA
Sbjct: 408 MIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYA 467
Query: 582 AEEQWDEFAQVRKRM-KEKNVKKISGFSQI 610
E+W+E +VR+ + ++K VKK GFS++
Sbjct: 468 NAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 122/266 (45%), Gaps = 21/266 (7%)
Query: 85 DAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMT 144
D + N++I VY + A +F +RDVV + ++DG KA + ARE+FD+M
Sbjct: 151 DLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMP 210
Query: 145 ERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHARR 200
R+ SW SLISGY + EA++LFD+M + V + +S AQ+G +
Sbjct: 211 LRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKA 270
Query: 201 FFDLMPEK----NTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANR 256
D K ++ T +V Y G ++F ++ + +WN MI+G
Sbjct: 271 IHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGN 330
Query: 257 VDEAIHLFETM------PDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPF-----KDMAA 305
+ + F M PD V++ +++ G + + +V+ AR FD M ++M
Sbjct: 331 GELTVDYFRKMVSSGIKPD--GVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKH 388
Query: 306 WSAMITAYVDEKLLGEALELFNLVPE 331
+ M L+ EA E+ +P+
Sbjct: 389 YGCMADLLGRAGLIEEAAEMIEQMPK 414
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 150/338 (44%), Gaps = 61/338 (18%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVV 118
N I + + A +LFDE PQRD V+YN +I +K +++ A +F +M RD+V
Sbjct: 156 NTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLV 215
Query: 119 AQSAMVDGYAKAGRLDNAREVFDNM----------------------------------T 144
+ ++++ GYA+ A ++FD M T
Sbjct: 216 SWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYT 275
Query: 145 ER-----NAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNG----LV 195
+R ++F T L+ Y +CG + A+++F+ S++++ TW M++G A +G V
Sbjct: 276 KRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTV 335
Query: 196 DHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPE-----RNVRSWNVMISG 250
D+ R+ + + + + +++ +G E LF +M R ++ + M
Sbjct: 336 DYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADL 395
Query: 251 CLSANRVDEAIHLFETMPD-----RNHVSWTAMVSGLAQNKMVEVARKYFD---IMPFKD 302
A ++EA + E MP ++W+ ++ G + +E+A K + + +D
Sbjct: 396 LGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPED 455
Query: 303 MAAWSAMITAYVDEKLLGEALELFNLVP-----EKNVG 335
+ M+ Y + + E +++ ++ +KNVG
Sbjct: 456 GGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVG 493
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/470 (28%), Positives = 245/470 (52%), Gaps = 45/470 (9%)
Query: 195 VDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVR----SWNVMISG 250
+++A F + + T + M++ Y++ F E + EM +R ++ ++
Sbjct: 82 MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKA 141
Query: 251 C--LSANRVDEAIH--LFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAW 306
C L + R + IH +F+ + + ++++ + +E++ F+ + K A+W
Sbjct: 142 CTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASW 201
Query: 307 SAMITAYVDEKLLGEALELF-NLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCF 365
S+M++A + E L LF + E N+ + E+G
Sbjct: 202 SSMVSARAGMGMWSECLLLFRGMCSETNL-----------KAEESG-------------- 236
Query: 366 RPCVTTMTSIITSC--DGMVEI-MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAML 422
M S + +C G + + M H ++ E N V +L+ +Y K G L A+
Sbjct: 237 ------MVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALH 290
Query: 423 VFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGL 482
+F+ ++ ++ ++++AMI A HG G AL++F++M+ G +PD + +V +L+ACSH+GL
Sbjct: 291 IFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGL 350
Query: 483 VNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVAL 542
V +GRRVF + + EHY CLVD+LGRAGL+ EA++ + +IP E ++ +
Sbjct: 351 VKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPI-EKNDVIWRTF 409
Query: 543 LGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVK 602
L C++ NI++ Q+LL L + G Y+L+SN Y+ + WD+ A+ R + K +K
Sbjct: 410 LSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLK 469
Query: 603 KISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPE 652
+ GFS +++KGK H F +RSHP+ +EIY L Q ++ ++ GY+P+
Sbjct: 470 QTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQ-MEWQLKFEGYSPD 518
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 123/259 (47%), Gaps = 11/259 (4%)
Query: 316 EKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSI 375
E + A +F + + +NT+I GYV EAL + M++ P T +
Sbjct: 79 ENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCL 138
Query: 376 ITSCDGMVEI---MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDV 432
+ +C + I Q H V LG E + +V N+LI +Y + G++ + VFE L+SK
Sbjct: 139 LKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTA 198
Query: 433 VSWTAMIVAYANHGHGHHALQVFARMVT-SGTKPDEITFVGLLSACSHAGLVNQGRRVFD 491
SW++M+ A A G L +F M + + K +E V L AC++ G +N G +
Sbjct: 199 ASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHG 258
Query: 492 -SIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHG 550
++ LN+ V+ + LVDM + G +++A+ + + + A++ LHG
Sbjct: 259 FLLRNISELNIIVQ--TSLVDMYVKCGCLDKALHIFQKMEKR--NNLTYSAMISGLALHG 314
Query: 551 NIKVANSIGQKLL--SLEP 567
+ A + K++ LEP
Sbjct: 315 EGESALRMFSKMIKEGLEP 333
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 135/302 (44%), Gaps = 35/302 (11%)
Query: 71 LKEARKLFDEMPQR----DAVSYNSMIAVYLK------NKDVHGAETIFKAMSERDVVAQ 120
+EA ++EM QR D +Y ++ + K +HG +FK E DV Q
Sbjct: 113 FEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHG--QVFKLGLEADVFVQ 170
Query: 121 SAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVV 180
+++++ Y + G ++ + VF+ + + A SW+S++S G E L LF M + +
Sbjct: 171 NSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNL 230
Query: 181 TW--TTMVSGF---AQNGLVDHARRFFDLM----PEKNTIAWTAMVKSYLDNGQFSEGYK 231
+ MVS A G ++ + E N I T++V Y+ G +
Sbjct: 231 KAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALH 290
Query: 232 LFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM------PDRNHVSWTAMVSGLAQN 285
+F +M +RN +++ MISG + A+ +F M PD HV + ++++ + +
Sbjct: 291 IFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPD--HVVYVSVLNACSHS 348
Query: 286 KMVEVARKYFDIMPFKDMAA-----WSAMITAYVDEKLLGEALELFNLVP-EKNVGIWNT 339
+V+ R+ F M + + ++ LL EALE +P EKN IW T
Sbjct: 349 GLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRT 408
Query: 340 II 341
+
Sbjct: 409 FL 410
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 87/172 (50%), Gaps = 16/172 (9%)
Query: 102 VHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRC 161
+HG + + +SE +++ Q+++VD Y K G LD A +F M +RN +++++ISG
Sbjct: 256 IHG--FLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALH 313
Query: 162 GRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTA-- 215
G E AL++F +M + + V + ++++ + +GLV RR F M ++ + TA
Sbjct: 314 GEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEH 373
Query: 216 ---MVKSYLDNGQFSEGYKLFLEMP-ERNVRSWNVMISGCLSANRVDEAIHL 263
+V G E + +P E+N W +S C RV + I L
Sbjct: 374 YGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQC----RVRQNIEL 421
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 110/264 (41%), Gaps = 17/264 (6%)
Query: 133 LDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSER----SVVTWTTMVSG 188
++ A +F + + F + ++I GY EEAL +++M +R T+ ++
Sbjct: 82 MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKA 141
Query: 189 FAQNGLVDHARRF----FDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSW 244
+ + ++ F L E + +++ Y G+ +F ++ + SW
Sbjct: 142 CTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASW 201
Query: 245 NVMISGCLSANRVDEAIHLFETMPDRNHVSW--TAMVSGL-------AQNKMVEVARKYF 295
+ M+S E + LF M ++ + MVS L A N + +
Sbjct: 202 SSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLL 261
Query: 296 DIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALR 355
+ ++ ++++ YV L +AL +F + ++N ++ +I G +GE ALR
Sbjct: 262 RNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALR 321
Query: 356 LFILMLRSCFRPCVTTMTSIITSC 379
+F M++ P S++ +C
Sbjct: 322 MFSKMIKEGLEPDHVVYVSVLNAC 345
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 218 bits (554), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 170/608 (27%), Positives = 291/608 (47%), Gaps = 47/608 (7%)
Query: 39 FLRNFTASISISHDWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLK 98
F ++ + ++ S S + I L + G+L EA ++ + + + + A L+
Sbjct: 10 FSQHASLCLTPSISSSAPTKQSRILELCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQ 69
Query: 99 NKD-----VHGAE---TIFKAMSERDVVAQSAMVDGYAKAGR-LDNAREVFDNMTERNAF 149
+ +HG + + K+ E D ++++ Y K G + R VFD ++A
Sbjct: 70 TCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAI 129
Query: 150 SWTSLISGYFRCGRTEEALQLFDQMS----ERSVVTWTTMVSGFAQNGLVDHARRFFDLM 205
SWTS++SGY +AL++F +M + + T ++ V ++ G V R F ++
Sbjct: 130 SWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVV 189
Query: 206 PEKNTIAWTAMVKSYLD-----NGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEA 260
+ W + S L N + + ++F EMPE +V W ++S + +EA
Sbjct: 190 I-THGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEA 248
Query: 261 IHLFETM-------PDRNHVSWTAMVSG----LAQNKMVEVARKYFDIMPFKDMAAWSAM 309
+ LF M PD + G L Q K E+ K ++ S++
Sbjct: 249 LGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGK--EIHGKLITNGIGSNVVVESSL 306
Query: 310 ITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRS---CFR 366
+ Y + EA ++FN + +KN W+ ++ GY +NGE +A+ +F M CF
Sbjct: 307 LDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCF- 365
Query: 367 PCVTTMTSIITSCDGMVEI---MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLV 423
+++ +C G+ + + H + G N V +ALI LY KSG + SA V
Sbjct: 366 ------GTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRV 419
Query: 424 FELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLV 483
+ + +++++W AM+ A A +G G A+ F MV G KPD I+F+ +L+AC H G+V
Sbjct: 420 YSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMV 479
Query: 484 NQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALL 543
++GR F + +Y + EHYSC++D+LGRAGL EA +++ D ++ LL
Sbjct: 480 DEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLER-AECRNDASLWGVLL 538
Query: 544 GACKLHGNI-KVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVK 602
G C + + +VA I ++++ LEP YVLLSN Y A + + +RK M + V
Sbjct: 539 GPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVA 598
Query: 603 KISGFSQI 610
K G S I
Sbjct: 599 KTVGQSWI 606
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 137/456 (30%), Positives = 230/456 (50%), Gaps = 33/456 (7%)
Query: 224 GQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM------------PDRN 271
G S ++F +P+ WN +I G ++ A + +M D
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 272 HVSWT------AMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALEL 325
S+T A+ S ++ R+ D + ++ AY L A +L
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLS----ADSLLCTTLLDAYSKNGDLISAYKL 166
Query: 326 FNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI 385
F+ +P ++V WN +I G V A EA+ L+ M R T+ + + +C + ++
Sbjct: 167 FDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDV 226
Query: 386 MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFE-LLKSKDVVSWTAMIVAYAN 444
+ + H N V+NA I +YSK G + A VFE K VV+W MI +A
Sbjct: 227 KEGEN-IFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAV 285
Query: 445 HGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVE 504
HG H AL++F ++ +G KPD+++++ L+AC HAGLV G VF+++ + ++
Sbjct: 286 HGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNM-ACKGVERNMK 344
Query: 505 HYSCLVDMLGRAGLVNEAMDVV---STIPPSEIDEAVLVALLGACKLHGNIKVANSIGQK 561
HY C+VD+L RAG + EA D++ S IP D + +LLGA +++ ++++A ++
Sbjct: 345 HYGCVVDLLSRAGRLREAHDIICSMSMIP----DPVLWQSLLGASEIYSDVEMAEIASRE 400
Query: 562 LLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFV 621
+ + + G +VLLSN YAA+ +W + +VR M+ K VKKI G S I+ KG H F+
Sbjct: 401 IKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYN 460
Query: 622 GERSHPQVEEIYGFLQQSLQPLMRETGYTPENSLLI 657
++SH Q EIY + + ++ +RE GY + L++
Sbjct: 461 SDKSHEQWREIYEKIDE-IRFKIREDGYVAQTGLVL 495
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 118/242 (48%), Gaps = 9/242 (3%)
Query: 209 NTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMP 268
+++ T ++ +Y NG YKLF EMP R+V SWN +I+G +S NR EA+ L++ M
Sbjct: 143 DSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRME 202
Query: 269 D----RNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALE 324
R+ V+ A + + V+ F ++ +A I Y + +A +
Sbjct: 203 TEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQ 262
Query: 325 LF-NLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCD--G 381
+F +K+V WNT+I G+ +GEA AL +F + + +P + + +T+C G
Sbjct: 263 VFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAG 322
Query: 382 MVEI-MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAM-LVFELLKSKDVVSWTAMI 439
+VE + + G E+N ++ L S++G L A ++ + D V W +++
Sbjct: 323 LVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLL 382
Query: 440 VA 441
A
Sbjct: 383 GA 384
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 115/246 (46%), Gaps = 21/246 (8%)
Query: 67 RRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMS----ERDVVAQSA 122
+ G L A KLFDEMP RD S+N++IA + A ++K M R V A
Sbjct: 156 KNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVA 215
Query: 123 MVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMS-ERSVVT 181
+ + G + +F + N + I Y +CG ++A Q+F+Q + ++SVVT
Sbjct: 216 ALGACSHLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVT 275
Query: 182 WTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFSEGYKLFLEMP 237
W TM++GFA +G A FD + + + +++ A + + G G +F M
Sbjct: 276 WNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMA 335
Query: 238 ----ERNVRSWNVMISGCLSANRVDEAIHLFETM---PDRNHVSWTAMVSG---LAQNKM 287
ERN++ + ++ A R+ EA + +M PD V W +++ + +M
Sbjct: 336 CKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDP--VLWQSLLGASEIYSDVEM 393
Query: 288 VEVARK 293
E+A +
Sbjct: 394 AEIASR 399
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 9/195 (4%)
Query: 116 DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMS 175
D + + ++D Y+K G L +A ++FD M R+ SW +LI+G R EA++L+ +M
Sbjct: 143 DSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRME 202
Query: 176 ----ERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYK 231
RS VT + + G V F N I A + Y G + Y+
Sbjct: 203 TEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQ 262
Query: 232 LFLEMP-ERNVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNK 286
+F + +++V +WN MI+G A+ +F+ + D + VS+ A ++
Sbjct: 263 VFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAG 322
Query: 287 MVEVARKYFDIMPFK 301
+VE F+ M K
Sbjct: 323 LVEYGLSVFNNMACK 337
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 132/361 (36%), Positives = 216/361 (59%), Gaps = 10/361 (2%)
Query: 302 DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILML 361
D+ S+++ Y + A ++F+ +P++NV W+ ++ GY + GE EAL LF L
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209
Query: 362 RSCFRPCVTTMTSIITSC--DGMVEI-MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLC 418
+ +S+I+ C ++E+ Q H + I F+ +++V ++L++LYSK G
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 419 SAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACS 478
A VF + K++ W AM+ AYA H H +++F RM SG KP+ ITF+ +L+ACS
Sbjct: 270 GAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACS 329
Query: 479 HAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEID--E 536
HAGLV++GR FD +K + + +HY+ LVDMLGRAG + EA++V++ +P ID E
Sbjct: 330 HAGLVDEGRYYFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALEVITNMP---IDPTE 385
Query: 537 AVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRM 596
+V ALL +C +H N ++A K+ L P SSG ++ LSNAYAA+ ++++ A+ RK +
Sbjct: 386 SVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLL 445
Query: 597 KEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPENSLL 656
+++ KK +G S ++ + K H F GER H + +EIY L + L M + GY + S +
Sbjct: 446 RDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAE-LGEEMEKAGYIADTSYV 504
Query: 657 I 657
+
Sbjct: 505 L 505
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 119/243 (48%), Gaps = 17/243 (6%)
Query: 116 DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQ-M 174
DV S++VD YAK G + AR++FD M +RN +W+ ++ GY + G EEAL LF + +
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209
Query: 175 SERSVV---TWTTMVSGFAQNGLVDHARRFFDL----MPEKNTIAWTAMVKSYLDNGQFS 227
E V ++++++S A + L++ R+ L + ++ +++V Y G
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 228 EGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMP----DRNHVSWTAMVSGLA 283
Y++F E+P +N+ WN M+ + + I LF+ M N +++ +++ +
Sbjct: 270 GAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACS 329
Query: 284 QNKMVEVARKYFDIMPFKDMAAWSAMITAYVD----EKLLGEALELFNLVP-EKNVGIWN 338
+V+ R YFD M + + VD L EALE+ +P + +W
Sbjct: 330 HAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWG 389
Query: 339 TII 341
++
Sbjct: 390 ALL 392
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 124/259 (47%), Gaps = 21/259 (8%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFK-AMSERDVVAQ 120
+ + + G++ ARK+FDEMPQR+ V+++ M+ Y + + A +FK A+ E V
Sbjct: 158 VDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVND 217
Query: 121 ---SAMVDGYAKAGRLDNAREVFD----NMTERNAFSWTSLISGYFRCGRTEEALQLFDQ 173
S+++ A + L+ R++ + + ++F +SL+S Y +CG E A Q+F++
Sbjct: 218 YSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNE 277
Query: 174 MSERSVVTWTTMVSGFAQNGLVDHARRFFDLMP----EKNTIAWTAMVKSYLDNGQFSEG 229
+ +++ W M+ +AQ+ F M + N I + ++ + G EG
Sbjct: 278 VPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEG 337
Query: 230 YKLFLEMPERNV----RSWNVMISGCLSANRVDEAIHLFETMP-DRNHVSWTAMVSGLAQ 284
F +M E + + + ++ A R+ EA+ + MP D W A+++
Sbjct: 338 RYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTV 397
Query: 285 NKMVEV----ARKYFDIMP 299
+K E+ A K F++ P
Sbjct: 398 HKNTELAAFAADKVFELGP 416
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 10/228 (4%)
Query: 309 MITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRP- 367
+I Y +L ++ F P+K+ W++II + +N +L M+ RP
Sbjct: 56 LINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPD 115
Query: 368 -----CVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAML 422
T +I++ CD + H + + G++ + +V ++L+ +Y+K G++ A
Sbjct: 116 DHVLPSATKSCAILSRCDIGRSV---HCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARK 172
Query: 423 VFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGL 482
+F+ + ++VV+W+ M+ YA G AL +F + ++ +F ++S C+++ L
Sbjct: 173 MFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTL 232
Query: 483 VNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIP 530
+ GR++ + + + S LV + + G+ A V + +P
Sbjct: 233 LELGRQIH-GLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVP 279
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 117/244 (47%), Gaps = 25/244 (10%)
Query: 90 NSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNA-----REVFDNMT 144
+S++ +Y K ++ A +F M +R+VV S M+ GYA+ G + A +F+N+
Sbjct: 155 SSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLA 214
Query: 145 ERNAFSWTSLI-----SGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHAR 199
N +S++S+I S GR L + S V +++VS +++ G+ + A
Sbjct: 215 -VNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVG-SSLVSLYSKCGVPEGAY 272
Query: 200 RFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMP----ERNVRSWNVMISGCLSAN 255
+ F+ +P KN W AM+K+Y + + +LF M + N ++ +++ C A
Sbjct: 273 QVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAG 332
Query: 256 RVDEAIHLFETM------PDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDM-AAWSA 308
VDE + F+ M P H + ++V L + ++ A + MP + W A
Sbjct: 333 LVDEGRYYFDQMKESRIEPTDKH--YASLVDMLGRAGRLQEALEVITNMPIDPTESVWGA 390
Query: 309 MITA 312
++T+
Sbjct: 391 LLTS 394
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 150/558 (26%), Positives = 275/558 (49%), Gaps = 46/558 (8%)
Query: 120 QSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQM----- 174
Q++++ YA + L +AR++FD M+ER+ SW+ +I Y + L+LF +M
Sbjct: 163 QNSILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAK 221
Query: 175 SERSVVTWTTMVSGFAQNGLVD--------HARRFFDLMPEKNTIAWTAMVKSYLDNGQF 226
+E VT T+++ +D RR FDL + +++ Y
Sbjct: 222 TEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDL---ADVFVCNSLIDMYSKGFDV 278
Query: 227 SEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNK 286
+++F E RN+ SWN +++G + R DEA+ +F M V V +
Sbjct: 279 DSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLM-----VQEAVEVDEVTVVS 333
Query: 287 MVEVARKYFDIMPFKDM-------------AAWSAMITAYVDEKLLGEALELFNLVPEKN 333
++ V + + +P K + A S++I AY L+ +A + + + K+
Sbjct: 334 LLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKD 393
Query: 334 VGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQ---AHA 390
V +T+I G G + EA+ +F M + P T+ S++ +C ++ AH
Sbjct: 394 VVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHG 450
Query: 391 MVIHLGFEQNTW-VTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGH 449
+ I N V +++ Y+K G + A F+ + K+++SWT +I AYA +G
Sbjct: 451 IAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPD 510
Query: 450 HALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCL 509
AL +F M G P+ +T++ LSAC+H GLV +G +F S+ + ++HYSC+
Sbjct: 511 KALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMV-EEDHKPSLQHYSCI 569
Query: 510 VDMLGRAGLVNEAMDVVSTIPPS-EIDEAVLVALLGACK-LHGNIKVANSIGQKLLSLEP 567
VDML RAG ++ A++++ +P + + A+L C+ + + + + ++L LEP
Sbjct: 570 VDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEP 629
Query: 568 TSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHP 627
S GY+L S+ +AAE+ W++ A +R+ +KE+ V+ ++G+S ++ F G++
Sbjct: 630 LCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQ 689
Query: 628 QVEEIYGFLQQSLQPLMR 645
E+ + QSL M+
Sbjct: 690 SDSELNDVV-QSLHRCMK 706
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 171/374 (45%), Gaps = 69/374 (18%)
Query: 74 ARKLFDEMPQRDAVSYNSMIAVYLKNKD-----------VHGAET--------------- 107
ARKLFDEM +RD +S++ +I Y+++K+ VH A+T
Sbjct: 178 ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 237
Query: 108 ---------------IFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWT 152
I + DV ++++D Y+K +D+A VFD T RN SW
Sbjct: 238 VMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWN 297
Query: 153 SLISGYFRCGRTEEALQLFDQMSERSV-VTWTTMVSGFAQNGLVDHARRFFDLMP----- 206
S+++G+ R +EAL++F M + +V V T+VS L+ + F +P
Sbjct: 298 SILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVS------LLRVCKFFEQPLPCKSIH 351
Query: 207 --------EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVD 258
E N +A ++++ +Y + + M ++V S + MISG A R D
Sbjct: 352 GVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSD 411
Query: 259 EAIHLFETMPDR-NHVSWTAMVSGLAQNKMVEVARKYFDI-----MPFKDMAAWSAMITA 312
EAI +F M D N ++ ++++ + + + ++ I + D++ ++++ A
Sbjct: 412 EAISIFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDA 471
Query: 313 YVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTM 372
Y + A F+ + EKN+ W II Y NG +AL LF M + + P T
Sbjct: 472 YAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTY 531
Query: 373 TSIITSCD--GMVE 384
+ +++C+ G+V+
Sbjct: 532 LAALSACNHGGLVK 545
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 17/207 (8%)
Query: 62 ITILGRRGKLKEARKLFDEMPQR-DAVSYNSMIAVYLKNKDVHGAE-----TIFKAMSER 115
I+ L G+ EA +F M +A++ S++ + D+ ++ I ++++
Sbjct: 401 ISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAIN 460
Query: 116 DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMS 175
D+ +++VD YAK G ++ AR FD +TE+N SWT +IS Y G ++AL LFD+M
Sbjct: 461 DISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMK 520
Query: 176 ER----SVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIA----WTAMVKSYLDNGQFS 227
++ + VT+ +S GLV F M E++ ++ +V G+
Sbjct: 521 QKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEID 580
Query: 228 EGYKLFLEMPER---NVRSWNVMISGC 251
+L +PE +W ++SGC
Sbjct: 581 TAVELIKNLPEDVKAGASAWGAILSGC 607
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 405 NALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTK 464
N++ Y K GDLCS + F+ + S+D VSW ++ ++G L F+++ G +
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE 124
Query: 465 PDEITFVGLLSAC 477
P+ T V ++ AC
Sbjct: 125 PNTSTLVLVIHAC 137
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 212 bits (540), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 143/484 (29%), Positives = 246/484 (50%), Gaps = 47/484 (9%)
Query: 121 SAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVV 180
+ +V Y + G++ +AR+VFD M +R+ +I R G +E+L F +M + +
Sbjct: 55 AKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLK 114
Query: 181 TWTTMVSGF--AQNGLVDHARRFFDLMP--------EKNTIAWTAMVKSYLDNGQFSEGY 230
+V A L+D R F ++ E + ++++ Y G+
Sbjct: 115 LDAFIVPSLLKASRNLLD--REFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNAR 172
Query: 231 KLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEV 290
K+F ++ E+++ +N MISG + ++ DEA++L + M
Sbjct: 173 KVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDM----------------------- 209
Query: 291 ARKYFDIMPFKDMAAWSAMITAYV---DEKLLGEALELFNLVPEK-NVGIWNTIIDGYVR 346
K I P D+ W+A+I+ + +E+ + E LEL L K +V W +II G V
Sbjct: 210 --KLLGIKP--DVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVH 265
Query: 347 NGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQA---HAMVIHLGFEQNTWV 403
N + +A F ML P T+ +++ +C + + H + G E + +V
Sbjct: 266 NFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFV 325
Query: 404 TNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGT 463
+AL+ +Y K G + AM++F K V++ +MI YANHG A+++F +M +G
Sbjct: 326 RSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGE 385
Query: 464 KPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAM 523
K D +TF +L+ACSHAGL + G+ +F ++ Y + ++EHY+C+VD+LGRAG + EA
Sbjct: 386 KLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAY 445
Query: 524 DVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAE 583
+++ + E D V ALL AC+ HGN+++A + L LEP +SG +LL++ YA
Sbjct: 446 EMIKAM-RMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANA 504
Query: 584 EQWD 587
W+
Sbjct: 505 GSWE 508
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 183/434 (42%), Gaps = 81/434 (18%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAM---------------- 112
GK+ +ARK+FDEMP+RD MI +N + F+ M
Sbjct: 65 GKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLL 124
Query: 113 -----------------------SERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAF 149
E D S+++D Y+K G + NAR+VF ++ E++
Sbjct: 125 KASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLV 184
Query: 150 SWTSLISGYFRCGRTEEALQLFDQMS----ERSVVTWTTMVSGFAQNGLVDHARRFFDLM 205
+ ++ISGY + +EAL L M + V+TW ++SGF+ + +LM
Sbjct: 185 VFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELM 244
Query: 206 P----EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAI 261
+ + ++WT+++ + N Q + + F +M + + I L A
Sbjct: 245 CLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTT---- 300
Query: 262 HLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGE 321
M + ++V+GL + V SA++ Y + E
Sbjct: 301 --LAYMKHGKEIHGYSVVTGLEDHGFVR-----------------SALLDMYGKCGFISE 341
Query: 322 ALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCD- 380
A+ LF P+K +N++I Y +G A +A+ LF M + + T T+I+T+C
Sbjct: 342 AMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSH 401
Query: 381 -GMVEIMQAHAMVIHLGFEQNTWVTN--ALITLYSKSGDLCSAMLVFELLKS----KDVV 433
G+ ++ Q +++ + + + ++ L ++G L A +E++K+ D+
Sbjct: 402 AGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEA---YEMIKAMRMEPDLF 458
Query: 434 SWTAMIVAYANHGH 447
W A++ A NHG+
Sbjct: 459 VWGALLAACRNHGN 472
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 212 bits (540), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 147/542 (27%), Positives = 259/542 (47%), Gaps = 28/542 (5%)
Query: 141 DNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSER-----SVVTWTTMVSGFAQNGLV 195
D ++ + S I C R EA +LF+ + R V T+ +V + +
Sbjct: 80 DTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSI 139
Query: 196 DHARRFFDLM------PEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMIS 249
+R + M PE+ + ++ ++ G + +LF E+PERN+ S+ +IS
Sbjct: 140 RCVKRVYGFMMSNGFEPEQYMM--NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIIS 197
Query: 250 GCLSANRVDEAIHLF----ETMPDRNHVSWTAMVSGLAQNKMVEVARKY----FDIMPFK 301
G ++ EA LF E + D ++ M+ A + V ++ +
Sbjct: 198 GFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVD 257
Query: 302 DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILML 361
+ +I Y + +A F +PEK WN +I GY +G + EAL L M
Sbjct: 258 NTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMR 317
Query: 362 RSCF---RPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLC 418
S + ++ M I T + QAHA +I GFE AL+ YSK G +
Sbjct: 318 DSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVD 377
Query: 419 SAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACS 478
+A VF+ L K+++SW A++ YANHG G A+++F +M+ + P+ +TF+ +LSAC+
Sbjct: 378 TARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACA 437
Query: 479 HAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAV 538
++GL QG +F S+ + + + HY+C++++LGR GL++EA+ + P + +
Sbjct: 438 YSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRR-APLKTTVNM 496
Query: 539 LVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKE 598
ALL AC++ N+++ + +KL + P G YV++ N Y + + E A V + ++
Sbjct: 497 WAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLES 556
Query: 599 KNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRET---GYTPENSL 655
K + + + ++V + H F G+R E + + Q + LM E GY+ E
Sbjct: 557 KGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQH 616
Query: 656 LI 657
L+
Sbjct: 617 LL 618
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 155/365 (42%), Gaps = 92/365 (25%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSER------------- 115
G + +AR+LFDE+P+R+ SY S+I+ ++ + A +FK M E
Sbjct: 172 GMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVML 231
Query: 116 --------------------------DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAF 149
+ ++D Y+K G +++AR F+ M E+
Sbjct: 232 RASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTV 291
Query: 150 SWTSLISGYFRCGRTEEALQLF----------DQMS------------------------ 175
+W ++I+GY G +EEAL L DQ +
Sbjct: 292 AWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASL 351
Query: 176 -----ERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGY 230
E +V T +V +++ G VD AR FD +P KN I+W A++ Y ++G+ ++
Sbjct: 352 IRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAV 411
Query: 231 KLFLEMPERNVRSWNV----MISGCLSANRVDEAIHLFETMPDRNHVS-----WTAMVSG 281
KLF +M NV +V ++S C + ++ +F +M + + + + M+
Sbjct: 412 KLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIEL 471
Query: 282 LAQNKMVEVARKYFDIMPFKDMA-AWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTI 340
L ++ +++ A + P K W+A++ A + E LEL +V EK G+
Sbjct: 472 LGRDGLLDEAIAFIRRAPLKTTVNMWAALLNAC----RMQENLELGRVVAEKLYGMGPEK 527
Query: 341 IDGYV 345
+ YV
Sbjct: 528 LGNYV 532
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 157/335 (46%), Gaps = 25/335 (7%)
Query: 70 KLKEARKLFDEMPQRDAV-----SYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMV 124
+ +EA +LF+ + R + +Y++++ ++ K + + ++ M + M+
Sbjct: 102 RFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMM 161
Query: 125 DG----YAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLF----DQMSE 176
+ + K G + +AR +FD + ERN +S+ S+ISG+ G EA +LF +++S+
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSD 221
Query: 177 RSVVTWTTMVSGFAQNGLVDHARRF----FDLMPEKNTIAWTAMVKSYLDNGQFSEGYKL 232
T+ M+ A G + ++ L NT ++ Y G +
Sbjct: 222 CETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCA 281
Query: 233 FLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMV---SGLAQN 285
F MPE+ +WN +I+G +EA+ L M D + + + M+ + LA+
Sbjct: 282 FECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKL 341
Query: 286 KMVEVARKYFDIMPFK-DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGY 344
++ + A F+ ++ A +A++ Y + A +F+ +P KN+ WN ++ GY
Sbjct: 342 ELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGY 401
Query: 345 VRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC 379
+G +A++LF M+ + P T +++++C
Sbjct: 402 ANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSAC 436
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 115/258 (44%), Gaps = 53/258 (20%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVY---------------LKNKDV---- 102
I + + G +++AR F+ MP++ V++N++IA Y +++ V
Sbjct: 266 IDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQ 325
Query: 103 --------------------HGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDN 142
++ + E ++VA +A+VD Y+K GR+D AR VFD
Sbjct: 326 FTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDK 385
Query: 143 MTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHA 198
+ +N SW +L+ GY GR +A++LF++M +V VT+ ++S A +GL +
Sbjct: 386 LPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQG 445
Query: 199 RRFFDLMPEKNTIA-----WTAMVKSYLDNGQFSEGYKLFLEMP-ERNVRSWNVMISGCL 252
F M E + I + M++ +G E P + V W +++ C
Sbjct: 446 WEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNAC- 504
Query: 253 SANRVDEAIHLFETMPDR 270
R+ E + L + ++
Sbjct: 505 ---RMQENLELGRVVAEK 519
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 152/499 (30%), Positives = 264/499 (52%), Gaps = 30/499 (6%)
Query: 135 NAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQM----SERSVVTWTTMVSGFA 190
+A +FD + +R+ S S +S + R G + L LF Q+ + S T+T ++ +
Sbjct: 36 HADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACS 95
Query: 191 QNGLVDHARRFFDLM----PEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNV 246
+ R+ LM E TI+ TA++ Y G + ++F + E+++ SWN
Sbjct: 96 LLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNA 155
Query: 247 MISGCLSANRVDEAIHLFETM-PDRNHVS---WTAMVSGLAQNKMVEVARKYFD--IMPF 300
++SG L + EA+ +F M +R +S +++V A K+++ ++ ++
Sbjct: 156 LLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG 215
Query: 301 KDMAAW-SAMITAYVDEKLLGEALELFN-LVPEKNVGIWNTIIDGYVRNGEAGEALRLFI 358
+D+ +AMI+ Y L+ EA++++N L + + N++I G +RN EA F+
Sbjct: 216 RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEA---FL 272
Query: 359 LMLRSCFRPCVTTMTSIITSCDGMVEI---MQAHAMVIHLGFEQNTWVTNALITLYSKSG 415
LM R RP V ++S + C ++ Q H + + GF ++ + N L+ +Y K G
Sbjct: 273 LMSRQ--RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCG 330
Query: 416 DLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVT--SGTKPDEITFVGL 473
+ A +F + SK VVSWT+MI AYA +G G AL++F M SG P+ +TF+ +
Sbjct: 331 QIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVV 390
Query: 474 LSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSE 533
+SAC+HAGLV +G+ F +K Y L EHY C +D+L +AG E +V + ++
Sbjct: 391 ISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMEND 450
Query: 534 ---IDEAVLVALLGACKLHGNIKVANSIGQKLL-SLEPTSSGGYVLLSNAYAAEEQWDEF 589
I A+ VA+L AC L+ ++ + ++L+ P ++ YVL+SN YAA +WD
Sbjct: 451 NQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVV 510
Query: 590 AQVRKRMKEKNVKKISGFS 608
++R ++K K + K +G S
Sbjct: 511 EELRGKLKNKGLVKTAGHS 529
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 178/424 (41%), Gaps = 80/424 (18%)
Query: 33 CQPIFRFLRNFTASISISHDWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSY--- 89
C I RF+R ++ + N+ + + R A LFDE+PQRD S
Sbjct: 4 CLRIGRFIRLGNVTV--------KSTNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQ 55
Query: 90 ----------NSMIAVYLK----------------------------NKDVHGAETIFKA 111
N +A++L+ + VH + K
Sbjct: 56 LSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHA--LMIKQ 113
Query: 112 MSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLF 171
+E ++++A++D Y+K G L ++ VF+++ E++ SW +L+SG+ R G+ +EAL +F
Sbjct: 114 GAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVF 173
Query: 172 DQM----SERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKN---TIAWTAMVKSYLDNG 224
M E S T +++V A ++ ++ ++ + TAM+ Y G
Sbjct: 174 AAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVG 233
Query: 225 QFSEGYKLFLEMPERNVRSWNVM----ISGCLSANRVDEAIHLFETMPDRNHVSWTAMVS 280
+E K++ + NV + VM ISGC+ EA L V ++ ++
Sbjct: 234 LINEAMKVYNSL---NVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQRPNVRV-LSSSLA 289
Query: 281 GLAQNKMVEVARKYFDIMP----FKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGI 336
G + N + + ++ + D + ++ Y + +A +F +P K+V
Sbjct: 290 GCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVS 349
Query: 337 WNTIIDGYVRNGEAGEALRLFILMLR--SCFRPCVTTMTSIITSCDGMVEIMQAHAMVIH 394
W ++ID Y NG+ +AL +F M S P T +I++C AHA ++
Sbjct: 350 WTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISAC--------AHAGLVK 401
Query: 395 LGFE 398
G E
Sbjct: 402 EGKE 405
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/307 (37%), Positives = 175/307 (57%), Gaps = 6/307 (1%)
Query: 307 SAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFR 366
S IT Y A ++F+ PE+ +G WN II G G A EA+ +F+ M RS
Sbjct: 156 SGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLE 215
Query: 367 PCVTTMTSIITSCDGMVEI---MQAHAMVIHLGFEQNTWVT--NALITLYSKSGDLCSAM 421
P TM S+ SC G+ ++ Q H V+ E+ + + N+LI +Y K G + A
Sbjct: 216 PDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLAS 275
Query: 422 LVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAG 481
+FE ++ ++VVSW++MIV YA +G+ AL+ F +M G +P++ITFVG+LSAC H G
Sbjct: 276 HIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGG 335
Query: 482 LVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVA 541
LV +G+ F +K + L + HY C+VD+L R G + EA VV + P + + V
Sbjct: 336 LVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEM-PMKPNVMVWGC 394
Query: 542 LLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNV 601
L+G C+ G++++A + ++ LEP + G YV+L+N YA W + +VRK MK K V
Sbjct: 395 LMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKV 454
Query: 602 KKISGFS 608
KI +S
Sbjct: 455 AKIPAYS 461
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 113/250 (45%), Gaps = 51/250 (20%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIA---------------VYLKNKDVHGAE 106
IT+ + G+ + ARK+FDE P+R S+N++I V +K + +
Sbjct: 159 ITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDD 218
Query: 107 ------------------------TIFKAMSER--DVVAQSAMVDGYAKAGRLDNAREVF 140
+ +A +E D++ ++++D Y K GR+D A +F
Sbjct: 219 FTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIF 278
Query: 141 DNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGLVD 196
+ M +RN SW+S+I GY G T EAL+ F QM E V +T+ ++S GLV+
Sbjct: 279 EEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVE 338
Query: 197 HARRFFDLMP-----EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPER-NVRSWNVMISG 250
+ +F +M E + +V +GQ E K+ EMP + NV W ++ G
Sbjct: 339 EGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGG 398
Query: 251 CLSANRVDEA 260
C V+ A
Sbjct: 399 CEKFGDVEMA 408
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 114/254 (44%), Gaps = 20/254 (7%)
Query: 116 DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMS 175
D +S + Y KAG +NAR+VFD ER SW ++I G GR EA+++F M
Sbjct: 151 DEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMK 210
Query: 176 ERSVVTWT-TMVSGFAQNGLVDHARRFFDL--------MPEKNTI-AWTAMVKSYLDNGQ 225
+ TMVS A G + F L EK+ I +++ Y G+
Sbjct: 211 RSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGR 270
Query: 226 FSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPD----RNHVSWTAMVSG 281
+F EM +RNV SW+ MI G + EA+ F M + N +++ ++S
Sbjct: 271 MDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSA 330
Query: 282 LAQNKMVEVARKYFDIMPFK-----DMAAWSAMITAYVDEKLLGEALELFNLVPEK-NVG 335
+VE + YF +M + ++ + ++ + L EA ++ +P K NV
Sbjct: 331 CVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVM 390
Query: 336 IWNTIIDGYVRNGE 349
+W ++ G + G+
Sbjct: 391 VWGCLMGGCEKFGD 404
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 139/320 (43%), Gaps = 33/320 (10%)
Query: 148 AFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPE 207
AF W +++ Y R +A+Q++ M +V+ + + + H F L E
Sbjct: 82 AFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHD---FTLGKE 138
Query: 208 KNTIAW-----------TAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANR 256
+++A + + Y G+F K+F E PER + SWN +I G A R
Sbjct: 139 LHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGR 198
Query: 257 VDEAIHLFETMP-------DRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFK-----DMA 304
+EA+ +F M D VS TA GL + K ++ K D+
Sbjct: 199 ANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKC--VLQAKTEEKSDIM 256
Query: 305 AWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSC 364
+++I Y + A +F + ++NV W+++I GY NG EAL F M
Sbjct: 257 MLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFG 316
Query: 365 FRPCVTTMTSIITSC--DGMVEIMQAHAMVIHLGFEQNTWVTN--ALITLYSKSGDLCSA 420
RP T ++++C G+VE + + ++ FE +++ ++ L S+ G L A
Sbjct: 317 VRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEA 376
Query: 421 MLVFELLKSK-DVVSWTAMI 439
V E + K +V+ W ++
Sbjct: 377 KKVVEEMPMKPNVMVWGCLM 396
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 102/203 (50%), Gaps = 18/203 (8%)
Query: 336 IWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIM---QAHAMV 392
+WN I+ Y+R+ +A+++++ M+RS P ++ +I + + + + H++
Sbjct: 84 LWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVA 143
Query: 393 IHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHAL 452
+ LGF + + + ITLY K+G+ +A VF+ + + SW A+I + G + A+
Sbjct: 144 VRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAV 203
Query: 453 QVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYS----- 507
++F M SG +PD+ T V + ++C G ++ ++ + L K E S
Sbjct: 204 EMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCV-----LQAKTEEKSDIMML 258
Query: 508 -CLVDMLGRAGLVNEAMDVVSTI 529
L+DM G+ G MD+ S I
Sbjct: 259 NSLIDMYGKCG----RMDLASHI 277
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 105/258 (40%), Gaps = 51/258 (19%)
Query: 85 DAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMT 144
D + I +Y K + A +F ER + + +A++ G AGR + A E+F +M
Sbjct: 151 DEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMK 210
Query: 145 ----ERNAFSWT-------------------------------------SLISGYFRCGR 163
E + F+ SLI Y +CGR
Sbjct: 211 RSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGR 270
Query: 164 TEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPE----KNTIAWTAMVKS 219
+ A +F++M +R+VV+W++M+ G+A NG A F M E N I + ++ +
Sbjct: 271 MDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSA 330
Query: 220 YLDNGQFSEGYKLFLEMP-----ERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHV- 273
+ G EG F M E + + ++ ++ EA + E MP + +V
Sbjct: 331 CVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVM 390
Query: 274 SWTAMVSGLAQNKMVEVA 291
W ++ G + VE+A
Sbjct: 391 VWGCLMGGCEKFGDVEMA 408
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 113/339 (33%), Positives = 190/339 (56%), Gaps = 9/339 (2%)
Query: 321 EALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILM---LRSCFRPCVTTMTSIIT 377
+A ++F+ +P+++ WN + Y+RN + L LF M + C +P T +
Sbjct: 166 DACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQ 225
Query: 378 SCDGMVEI---MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVS 434
+C + + Q H + G ++N L+++YS+ G + A VF ++ ++VVS
Sbjct: 226 ACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVS 285
Query: 435 WTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIK 494
WTA+I A +G G A++ F M+ G P+E T GLLSACSH+GLV +G FD ++
Sbjct: 286 WTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMR 345
Query: 495 -GAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIK 553
G + + + HY C+VD+LGRA L+++A ++ ++ + D + LLGAC++HG+++
Sbjct: 346 SGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSM-EMKPDSTIWRTLLGACRVHGDVE 404
Query: 554 VANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVK 613
+ + L+ L+ +G YVLL N Y+ +W++ ++R MKEK + G S I+++
Sbjct: 405 LGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQ 464
Query: 614 GKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPE 652
G H F V + SHP+ EEIY L + Q L + GY E
Sbjct: 465 GTVHEFIVDDVSHPRKEEIYKMLAEINQQL-KIAGYVAE 502
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 117/248 (47%), Gaps = 32/248 (12%)
Query: 73 EARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMS-------ERDVVAQSAMVD 125
+A K+FDE+P+RD VS+N + + YL+NK +F M + D V +
Sbjct: 166 DACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQ 225
Query: 126 GYAKAGRLDNAREVFDNMTERNAFSW-----TSLISGYFRCGRTEEALQLFDQMSERSVV 180
A G LD ++V D + E N S +L+S Y RCG ++A Q+F M ER+VV
Sbjct: 226 ACANLGALDFGKQVHDFIDE-NGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVV 284
Query: 181 TWTTMVSGFAQNGLVDHARRFFDLM------PEKNTIAWTAMVKSYLDNGQFSEGYKLFL 234
+WT ++SG A NG A F+ M PE+ T+ T ++ + +G +EG F
Sbjct: 285 SWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTL--TGLLSACSHSGLVAEGMMFFD 342
Query: 235 EMP------ERNVRSWNVMISGCLSANRVDEAIHLFETM---PDRNHVSWTAMVSGLAQN 285
M + N+ + ++ A +D+A L ++M PD W ++ +
Sbjct: 343 RMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDS--TIWRTLLGACRVH 400
Query: 286 KMVEVARK 293
VE+ +
Sbjct: 401 GDVELGER 408
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 132/315 (41%), Gaps = 37/315 (11%)
Query: 73 EARKLFDEMPQRDAVSYNSMIAVY-----LKNKDVHGA----ETIFKAMSERDVVAQSAM 123
E +LF + + ++ N + + + +K+ D+ G IF D + + +
Sbjct: 95 EGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTL 154
Query: 124 VDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMS-------E 176
+D Y+ +A +VFD + +R+ SW L S Y R RT + L LFD+M +
Sbjct: 155 MDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVK 214
Query: 177 RSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAW----TAMVKSYLDNGQFSEGYKL 232
VT + A G +D ++ D + E +V Y G + Y++
Sbjct: 215 PDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQV 274
Query: 233 FLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM------PDRNHVSWTAMVSGLAQNK 286
F M ERNV SW +ISG EAI F M P+ + T ++S + +
Sbjct: 275 FYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQ--TLTGLLSACSHSG 332
Query: 287 MVEVARKYFDIM---PFK---DMAAWSAMITAYVDEKLLGEALELFNLVPEK-NVGIWNT 339
+V +FD M FK ++ + ++ +LL +A L + K + IW T
Sbjct: 333 LVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRT 392
Query: 340 IIDGYVRNG--EAGE 352
++ +G E GE
Sbjct: 393 LLGACRVHGDVELGE 407
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 18/200 (9%)
Query: 338 NTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC----DGMVEIMQAHAMVI 393
NT+I + + E RLF + R+ P +S C ++ +Q H +
Sbjct: 81 NTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIF 140
Query: 394 HLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQ 453
GF ++ + L+ LYS + A VF+ + +D VSW + Y + L
Sbjct: 141 SDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLV 200
Query: 454 VFARM---VTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSI-----KGAYNLNLKVEH 505
+F +M V KPD +T + L AC++ G ++ G++V D I GA NL+
Sbjct: 201 LFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLS----- 255
Query: 506 YSCLVDMLGRAGLVNEAMDV 525
+ LV M R G +++A V
Sbjct: 256 -NTLVSMYSRCGSMDKAYQV 274
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 101/235 (42%), Gaps = 22/235 (9%)
Query: 166 EALQLFDQMSERSVVTWTTMVSGFAQN----------GLVDHARRFFDLMPEKNTIAWTA 215
E +LF + S + + S FA GL H + F D +++ T
Sbjct: 95 EGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLS-DSLLMTT 153
Query: 216 MVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDR----- 270
++ Y ++ K+F E+P+R+ SWNV+ S L R + + LF+ M +
Sbjct: 154 LMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCV 213
Query: 271 --NHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAW----SAMITAYVDEKLLGEALE 324
+ V+ + A ++ ++ D + ++ + +++ Y + +A +
Sbjct: 214 KPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQ 273
Query: 325 LFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC 379
+F + E+NV W +I G NG EA+ F ML+ P T+T ++++C
Sbjct: 274 VFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSAC 328
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 142/484 (29%), Positives = 253/484 (52%), Gaps = 33/484 (6%)
Query: 116 DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMS 175
DV ++++ Y+K G L+ A ++F N+ +R+ SW+++I+ Y + G+ +EA+ LF M
Sbjct: 334 DVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMM 393
Query: 176 ----ERSVVTWTTMVSGFA-----QNGLVDHARRF-FDLMPEKNTIAWTAMVKSYLDNGQ 225
+ + VT T+++ G A + G H D+ E T TA++ Y G+
Sbjct: 394 RIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETA--TAVISMYAKCGR 451
Query: 226 FSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM------PDR----NHVSW 275
FS K F +P ++ ++N + G ++A +++ M PD +
Sbjct: 452 FSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQT 511
Query: 276 TAMVSGLAQNKMV--EVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVP-EK 332
A S A+ V ++ + FD + A+I + L A+ LF+ EK
Sbjct: 512 CAFCSDYARGSCVYGQIIKHGFD----SECHVAHALINMFTKCDALAAAIVLFDKCGFEK 567
Query: 333 NVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI---MQAH 389
+ WN +++GY+ +G+A EA+ F M F+P T +I+ + + + M H
Sbjct: 568 STVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVH 627
Query: 390 AMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGH 449
+ +I GF T V N+L+ +Y+K G + S+ F + +K +VSW M+ AYA HG
Sbjct: 628 SSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLAS 687
Query: 450 HALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCL 509
A+ +F M + KPD ++F+ +LSAC HAGLV +G+R+F+ + + + +VEHY+C+
Sbjct: 688 CAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACM 747
Query: 510 VDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTS 569
VD+LG+AGL EA++++ + + V ALL + ++H N+ ++N+ +L+ LEP +
Sbjct: 748 VDLLGKAGLFGEAVEMMRRMRV-KTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLN 806
Query: 570 SGGY 573
Y
Sbjct: 807 PSHY 810
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 127/545 (23%), Positives = 234/545 (42%), Gaps = 70/545 (12%)
Query: 40 LRNFTASISISHDWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKN 99
+ + A + + D + VE+ R L AR++FD+M +D V++N+M++ +N
Sbjct: 122 IHDLIAEMGLESDVYIGTALVEMYCKAR--DLVSARQVFDKMHVKDVVTWNTMVSGLAQN 179
Query: 100 KDVHGAETIFKAMS----ERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERN---AFSWT 152
A +F M + D V+ ++ +K + D R + + ++ AFS +
Sbjct: 180 GCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFS-S 238
Query: 153 SLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKN--- 209
LI Y C A +F+++ + +W TM++ +A NG + FDLM +
Sbjct: 239 GLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRM 298
Query: 210 -------------------------------------TIAWTAMVKSYLDNGQFSEGYKL 232
++A T+++ Y G+ +L
Sbjct: 299 NKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVA-TSLMSMYSKCGELEIAEQL 357
Query: 233 FLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM----PDRNHVSWTAMVSGLAQ---- 284
F+ + +R+V SW+ MI+ A + DEAI LF M N V+ T+++ G A
Sbjct: 358 FINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAAS 417
Query: 285 --NKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIID 342
K + DI ++ +A+I+ Y AL+ F +P K+ +N +
Sbjct: 418 RLGKSIHCYAIKADIE--SELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQ 475
Query: 343 GYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQA---HAMVIHLGFEQ 399
GY + G+A +A ++ M P TM ++ +C + + + +I GF+
Sbjct: 476 GYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDS 535
Query: 400 NTWVTNALITLYSKSGDLCSAMLVFELLK-SKDVVSWTAMIVAYANHGHGHHALQVFARM 458
V +ALI +++K L +A+++F+ K VSW M+ Y HG A+ F +M
Sbjct: 536 ECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQM 595
Query: 459 VTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDS-IKGAYNLNLKVEHYSCLVDMLGRAG 517
+P+ +TFV ++ A + + G V S I+ + V + LVDM + G
Sbjct: 596 KVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNS--LVDMYAKCG 653
Query: 518 LVNEA 522
++ +
Sbjct: 654 MIESS 658
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 189/427 (44%), Gaps = 21/427 (4%)
Query: 123 MVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVV-- 180
+++ Y+ R D +R +FD++ + W S+I GY R G EAL F MSE +
Sbjct: 39 LINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDP 98
Query: 181 ---TWTTMVSGFAQNGLVDHARRFFDLMPE----KNTIAWTAMVKSYLDNGQFSEGYKLF 233
++T + A + R DL+ E + TA+V+ Y ++F
Sbjct: 99 DKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVF 158
Query: 234 LEMPERNVRSWNVMISGCLSANRVDEAIHLFETMP----DRNHVSWTAMVSGLAQNKMVE 289
+M ++V +WN M+SG A+ LF M D +HVS ++ +++ + +
Sbjct: 159 DKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSD 218
Query: 290 VARKYFDIMPFKDM--AAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRN 347
V R ++ K A S +I Y + L A +F V K+ W T++ Y N
Sbjct: 219 VCRCLHGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHN 278
Query: 348 GEAGEALRLFILMLRSCFR---PCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVT 404
G E L LF LM R + +V+ + H + G + V
Sbjct: 279 GFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVA 338
Query: 405 NALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTK 464
+L+++YSK G+L A +F ++ +DVVSW+AMI +Y G A+ +F M+ K
Sbjct: 339 TSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIK 398
Query: 465 PDEITFVGLLSACSHAGLVNQGRRVFD-SIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAM 523
P+ +T +L C+ G+ + +IK ++ ++E + ++ M + G + A+
Sbjct: 399 PNAVTLTSVLQGCAGVAASRLGKSIHCYAIKA--DIESELETATAVISMYAKCGRFSPAL 456
Query: 524 DVVSTIP 530
+P
Sbjct: 457 KAFERLP 463
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 134/546 (24%), Positives = 223/546 (40%), Gaps = 65/546 (11%)
Query: 37 FRFLRNFTASISISHDWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVY 96
FR L S+ +S L+ N I + +R +FD + V +NSMI Y
Sbjct: 18 FRCLLQVHGSLIVS---GLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGY 74
Query: 97 LKNKDVHGAETIFKAMSER---DVVAQSAMVDGYAKAGRLDNAR--EVFDNMT----ERN 147
+ A F MSE D S A AG +D + + D + E +
Sbjct: 75 TRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESD 134
Query: 148 AFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGL------------- 194
+ T+L+ Y + A Q+FD+M + VVTW TMVSG AQNG
Sbjct: 135 VYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRS 194
Query: 195 ----VDHARRFFDLMP-----EKNTIA----------------WTAMVKSYLDNGQFSEG 229
+DH ++L+P EK+ + + ++ Y +
Sbjct: 195 CCVDIDHV-SLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMYCNCADLYAA 253
Query: 230 YKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRN-HVSWTAMVSGLAQNKMV 288
+F E+ ++ SW M++ +E + LF+ M + + ++ A S L V
Sbjct: 254 ESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYV 313
Query: 289 EVARKYFDIMPFK-------DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTII 341
K I + D++ +++++ Y L A +LF + +++V W+ +I
Sbjct: 314 GDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMI 373
Query: 342 DGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI---MQAHAMVIHLGFE 398
Y + G+ EA+ LF M+R +P T+TS++ C G+ H I E
Sbjct: 374 ASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIE 433
Query: 399 QNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARM 458
A+I++Y+K G A+ FE L KD V++ A+ Y G + A V+ M
Sbjct: 434 SELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNM 493
Query: 459 VTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDS-IKGAYNLNLKVEHYSCLVDMLGRAG 517
G PD T VG+L C+ +G V+ IK ++ V H L++M +
Sbjct: 494 KLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAH--ALINMFTKCD 551
Query: 518 LVNEAM 523
+ A+
Sbjct: 552 ALAAAI 557
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 144/344 (41%), Gaps = 68/344 (19%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQS 121
I++ + G+ A K F+ +P +DAV++N++ Y + D + A ++K M V S
Sbjct: 443 ISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDS 502
Query: 122 ---------------------------------------AMVDGYAKAGRLDNAREVFDN 142
A+++ + K L A +FD
Sbjct: 503 RTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDK 562
Query: 143 MT-ERNAFSWTSLISGYFRCGRTEEALQLFDQMS----ERSVVTWTTMVSGFAQ-----N 192
E++ SW +++GY G+ EEA+ F QM + + VT+ +V A+
Sbjct: 563 CGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRV 622
Query: 193 GLVDHAR----RFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMI 248
G+ H+ F P N+ +V Y G K F+E+ + + SWN M+
Sbjct: 623 GMSVHSSLIQCGFCSQTPVGNS-----LVDMYAKCGMIESSEKCFIEISNKYIVSWNTML 677
Query: 249 SGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIMPFK--- 301
S + A+ LF +M + + VS+ +++S +VE ++ F+ M +
Sbjct: 678 SAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKI 737
Query: 302 --DMAAWSAMITAYVDEKLLGEALELFNLVPEK-NVGIWNTIID 342
++ ++ M+ L GEA+E+ + K +VG+W +++
Sbjct: 738 EAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLN 781
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 208 bits (530), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 145/475 (30%), Positives = 235/475 (49%), Gaps = 55/475 (11%)
Query: 195 VDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPER-----NVRSWNVMIS 249
++ AR+ FD M E N ++WT+++ Y D G+ +F +M E N ++ +
Sbjct: 80 INTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFK 139
Query: 250 GC--LSANRVDEAIH--LFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAA 305
C L+ +R+ + IH L + RN V +++V + VE AR+ FD M
Sbjct: 140 ACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSM------- 192
Query: 306 WSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCF 365
+G +NV W ++I Y +N EA+ LF RS F
Sbjct: 193 -------------IGYG---------RNVVSWTSMITAYAQNARGHEAIELF----RS-F 225
Query: 366 RPCVTT-------MTSIITSCDGMVEIM---QAHAMVIHLGFEQNTWVTNALITLYSKSG 415
+T+ + S+I++C + + AH +V G+E NT V +L+ +Y+K G
Sbjct: 226 NAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCG 285
Query: 416 DLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLS 475
L A +F ++ V+S+T+MI+A A HG G A+++F MV P+ +T +G+L
Sbjct: 286 SLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLH 345
Query: 476 ACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEID 535
ACSH+GLVN+G + Y + HY+C+VDMLGR G V+EA ++ TI
Sbjct: 346 ACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQ 405
Query: 536 EAVL-VALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRK 594
A+L ALL A +LHG +++ + ++L+ + Y+ LSNAYA W++ +R
Sbjct: 406 GALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRL 465
Query: 595 RMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGY 649
MK K S I+ K ++F G+ S + EI FL+ L+ M+E G+
Sbjct: 466 EMKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKD-LEKRMKERGH 519
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 127/296 (42%), Gaps = 69/296 (23%)
Query: 70 KLKE---ARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSE------------ 114
KLKE ARKLFDEM + + VS+ S+I+ Y A ++F+ M E
Sbjct: 76 KLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFA 135
Query: 115 ----------------------------RDVVAQSAMVDGYAKAGRLDNAREVFDNMT-- 144
R++V S++VD Y K ++ AR VFD+M
Sbjct: 136 SVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGY 195
Query: 145 ERNAFSWTSLISGYFRCGRTEEALQLF------------DQMSERSVVTWTTMVSGFAQN 192
RN SWTS+I+ Y + R EA++LF +Q SV++ + + G Q
Sbjct: 196 GRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSL-GRLQW 254
Query: 193 GLVDHA---RRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMIS 249
G V H R + E NT+ T+++ Y G S K+FL + +V S+ MI
Sbjct: 255 GKVAHGLVTRGGY----ESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIM 310
Query: 250 GCLSANRVDEAIHLFETMP----DRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFK 301
+ A+ LF+ M + N+V+ ++ + + +V +Y +M K
Sbjct: 311 AKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEK 366
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 141/357 (39%), Gaps = 67/357 (18%)
Query: 116 DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMS 175
D + +V Y K ++ AR++FD M E N SWTS+ISGY G+ + AL +F +M
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 176 E----------------------------------------RSVVTWTTMVSGFAQNGLV 195
E R++V +++V + + V
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDV 182
Query: 196 DHARRFFDLMP--EKNTIAWTAMVKSYLDNGQFSEGYKLF------LEMPERNVRSWNVM 247
+ ARR FD M +N ++WT+M+ +Y N + E +LF L N +
Sbjct: 183 ETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASV 242
Query: 248 ISGCLSANRVD--EAIHLFETMP--DRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDM 303
IS C S R+ + H T + N V T+++ A+ + A K F + +
Sbjct: 243 ISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSV 302
Query: 304 AAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYV----RNGEAGEALRLFIL 359
++++MI A L A++LF+ + + + G + +G E L L
Sbjct: 303 ISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSL 362
Query: 360 MLR-------SCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALIT 409
M S CV M D E+ A I +G EQ + AL++
Sbjct: 363 MAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYEL----AKTIEVGAEQGALLWGALLS 415
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
Query: 389 HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHG 448
H + + LGF +T+ N L+ Y K ++ +A +F+ + +VVSWT++I Y + G
Sbjct: 52 HTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKP 111
Query: 449 HHALQVFARMVTS-GTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYS 507
+AL +F +M P+E TF + ACS G+ + ++ + L + S
Sbjct: 112 QNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEIS-GLRRNIVVSS 170
Query: 508 CLVDMLGRAGLVNEAMDVVSTI 529
LVDM G+ V A V ++
Sbjct: 171 SLVDMYGKCNDVETARRVFDSM 192
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 208 bits (530), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 132/428 (30%), Positives = 220/428 (51%), Gaps = 14/428 (3%)
Query: 196 DHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNV----RSWNVMISGC 251
D+A R F + N + + AM+K Y G E F M R + ++ ++ C
Sbjct: 53 DYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSC 112
Query: 252 --LSANRVDEAIH--LFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWS 307
LS R + +H L T R +V + A+K FD M +++ W+
Sbjct: 113 SSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWN 172
Query: 308 AMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRP 367
MI + D + L LF + E+++ WN++I + G EAL LF M+ F P
Sbjct: 173 LMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDP 232
Query: 368 CVTTMTSI--ITSCDGMVEIMQ-AHAMVIHLG-FEQNTWVTNALITLYSKSGDLCSAMLV 423
T+ ++ I++ G+++ + H+ G F+ V NAL+ Y KSGDL +A +
Sbjct: 233 DEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAI 292
Query: 424 FELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSG-TKPDEITFVGLLSACSHAGL 482
F ++ ++VVSW +I A +G G + +F M+ G P+E TF+G+L+ CS+ G
Sbjct: 293 FRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQ 352
Query: 483 VNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVAL 542
V +G +F + + L + EHY +VD++ R+G + EA + +P + + A+ +L
Sbjct: 353 VERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNA-NAAMWGSL 411
Query: 543 LGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVK 602
L AC+ HG++K+A +L+ +EP +SG YVLLSN YA E +W + +VR MK+ ++
Sbjct: 412 LSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLR 471
Query: 603 KISGFSQI 610
K +G S I
Sbjct: 472 KSTGQSTI 479
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 128/283 (45%), Gaps = 30/283 (10%)
Query: 92 MIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSW 151
++ +Y + A+ +F MSER+VV + M+ G+ +G ++ +F M+ER+ SW
Sbjct: 143 VVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSW 202
Query: 152 TSLISGYFRCGRTEEALQLF----DQMSERSVVTWTTMVSGFAQNGLVDHAR-------- 199
S+IS +CGR EAL+LF DQ + T T++ A G++D +
Sbjct: 203 NSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAES 262
Query: 200 --RFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRV 257
F D + N A+V Y +G +F +M RNV SWN +ISG +
Sbjct: 263 SGLFKDFITVGN-----ALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKG 317
Query: 258 DEAIHLFETMPDR-----NHVSWTAMVSGLAQNKMVEVARKYFDIM--PFKDMAA---WS 307
+ I LF+ M + N ++ +++ + VE + F +M FK A +
Sbjct: 318 EFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYG 377
Query: 308 AMITAYVDEKLLGEALELFNLVP-EKNVGIWNTIIDGYVRNGE 349
AM+ + EA + +P N +W +++ +G+
Sbjct: 378 AMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGD 420
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 121/277 (43%), Gaps = 54/277 (19%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYA 128
G++ +A+K+FDEM +R+ V +N MI + + DV +FK MSER +V+ ++M+ +
Sbjct: 151 GRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLS 210
Query: 129 KAGRLDNAREVFDNMTER----------------------NAFSW--------------- 151
K GR A E+F M ++ + W
Sbjct: 211 KCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFI 270
Query: 152 ---TSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEK 208
+L+ Y + G E A +F +M R+VV+W T++SG A NG + FD M E+
Sbjct: 271 TVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEE 330
Query: 209 NTIA-----WTAMVKSYLDNGQFSEGYKLFLEMPER-----NVRSWNVMISGCLSANRVD 258
+A + ++ GQ G +LF M ER + M+ + R+
Sbjct: 331 GKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRIT 390
Query: 259 EAIHLFETMP-DRNHVSWTAMVSGLAQN---KMVEVA 291
EA + MP + N W +++S + K+ EVA
Sbjct: 391 EAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVA 427
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 154/565 (27%), Positives = 265/565 (46%), Gaps = 61/565 (10%)
Query: 70 KLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAK 129
++ +A K+ DEMP+R S N+ ++ L+N A +F D + ++
Sbjct: 81 QVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFG-----DARVSGSGMNSVTV 135
Query: 130 AGRLDNAREVFDNMT----------ERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV 179
A L ++ M E + TSL+S Y RCG A ++F+++ +SV
Sbjct: 136 ASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSV 195
Query: 180 VTWTTMVSGFAQNGLVDHARRFFDLM-----PEKNTIAWTAMVKSYLDNGQFSEGYKLFL 234
VT+ +SG +NG+++ F+LM E N + + + + G +L
Sbjct: 196 VTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHG 255
Query: 235 EMPERNVRSWNVMISGCL----SANRV-DEAIHLFETMPD-RNHVSWTAMVSGLAQNKMV 288
+ ++ + + M+ L S R A +F + D RN +SW +++SG+ N
Sbjct: 256 LVMKKEFQ-FETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQH 314
Query: 289 EVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNG 348
E A + F EKL E L+ + WN++I G+ + G
Sbjct: 315 ETAVELF--------------------EKLDSEGLK-------PDSATWNSLISGFSQLG 347
Query: 349 EAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIM---QAHAMVIHLGFEQNTWVTN 405
+ EA + F ML P + +TS++++C + + + H VI E++ +V
Sbjct: 348 KVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLT 407
Query: 406 ALITLYSKSGDLCSAMLVFELL--KSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGT 463
+LI +Y K G A +F+ K KD V W MI Y HG A+++F +
Sbjct: 408 SLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKV 467
Query: 464 KPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAM 523
+P TF +LSACSH G V +G ++F ++ Y EH C++D+LGR+G + EA
Sbjct: 468 EPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAK 527
Query: 524 DVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAE 583
+V+ + SE +V +LLG+C+ H + + KL LEP + +V+LS+ YAA
Sbjct: 528 EVIDQM--SEPSSSVYSSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAAL 585
Query: 584 EQWDEFAQVRKRMKEKNVKKISGFS 608
E+W++ +R+ + +K + K+ G S
Sbjct: 586 ERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 99/191 (51%), Gaps = 1/191 (0%)
Query: 300 FKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFIL 359
F D+ +A+++ Y+ K + +AL++ + +PE+ + N + G + NG +A R+F
Sbjct: 63 FVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGD 122
Query: 360 MLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCS 419
S T+ S++ C + MQ H + + GFE +V +L+++YS+ G+
Sbjct: 123 ARVSGSGMNSVTVASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVL 182
Query: 420 AMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVT-SGTKPDEITFVGLLSACS 478
A +FE + K VV++ A I +G + VF M S +P+++TFV ++AC+
Sbjct: 183 AARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACA 242
Query: 479 HAGLVNQGRRV 489
+ GR++
Sbjct: 243 SLLNLQYGRQL 253
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 183/319 (57%), Gaps = 10/319 (3%)
Query: 318 LLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIIT 377
+L +L++ +L+P WN +I GYV+ G E L ++ M ++ P T S+
Sbjct: 164 ILFRSLKIRDLIP------WNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFR 217
Query: 378 SCDGMVEI---MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVS 434
+C + + +AHA++I + N V +AL+ +Y K VF+ L +++V++
Sbjct: 218 ACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVIT 277
Query: 435 WTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIK 494
WT++I Y HG L+ F +M G +P+ +TF+ +L+AC+H GLV++G F S+K
Sbjct: 278 WTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMK 337
Query: 495 GAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKV 554
Y + + +HY+ +VD LGRAG + EA + V P E V +LLGAC++HGN+K+
Sbjct: 338 RDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKE-HPPVWGSLLGACRIHGNVKL 396
Query: 555 ANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKG 614
K L L+PT+ G YV+ +N YA+ + ++VR++M+ VKK G+SQI+++G
Sbjct: 397 LELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQG 456
Query: 615 KNHLFFVGERSHPQVEEIY 633
+ H F + SH E+IY
Sbjct: 457 EVHRFMKDDTSHRLSEKIY 475
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 114/279 (40%), Gaps = 56/279 (20%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKN-------------------KDVHGAETIF 109
G L+ A LF + RD + +N+MI+ Y++ D + ++F
Sbjct: 157 GDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVF 216
Query: 110 KAMSERD--------------------VVAQSAMVDGYAKAGRLDNAREVFDNMTERNAF 149
+A S D ++ SA+VD Y K + VFD ++ RN
Sbjct: 217 RACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVI 276
Query: 150 SWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHA------- 198
+WTSLISGY G+ E L+ F++M E VT+ +++ GLVD
Sbjct: 277 TWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSM 336
Query: 199 RRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMP-ERNVRSWNVMISGCLSANRV 257
+R + + PE A AMV + G+ E Y+ ++ P + + W ++ C V
Sbjct: 337 KRDYGIEPEGQHYA--AMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNV 394
Query: 258 ---DEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARK 293
+ A F + N ++ +G A + E A K
Sbjct: 395 KLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASK 433
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 112/234 (47%), Gaps = 20/234 (8%)
Query: 127 YAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVV----TW 182
YA +G L A +F ++ R+ W ++ISGY + G +E L ++ M + +V T+
Sbjct: 153 YALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTF 212
Query: 183 TTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFSEGYKLFLEMPE 238
++ + ++H +R +M ++ N I +A+V Y FS+G+++F ++
Sbjct: 213 ASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLST 272
Query: 239 RNVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKY 294
RNV +W +ISG +V E + FE M + N V++ +++ +V+ ++
Sbjct: 273 RNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEH 332
Query: 295 FDIMPFKDMAA------WSAMITAYVDEKLLGEALELFNLVP-EKNVGIWNTII 341
F M +D ++AM+ L EA E P +++ +W +++
Sbjct: 333 FYSMK-RDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLL 385
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 113/261 (43%), Gaps = 53/261 (20%)
Query: 92 MIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAG-------------------- 131
++ +Y + D+ A +F+++ RD++ +AM+ GY + G
Sbjct: 149 LLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPD 208
Query: 132 ---------------RLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQLFD 172
RL++ + M +R N ++L+ YF+C + ++FD
Sbjct: 209 QYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFD 268
Query: 173 QMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFSE 228
Q+S R+V+TWT+++SG+ +G V + F+ M E+ N + + ++ + G +
Sbjct: 269 QLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDK 328
Query: 229 GYKLFLEMP-----ERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVS-WTAMVSGL 282
G++ F M E + + M+ A R+ EA P + H W +++
Sbjct: 329 GWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGAC 388
Query: 283 ---AQNKMVEV-ARKYFDIMP 299
K++E+ A K+ ++ P
Sbjct: 389 RIHGNVKLLELAATKFLELDP 409
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 3/125 (2%)
Query: 389 HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHG 448
HA + +GF N ++ L+ LY+ SGDL +A ++F LK +D++ W AMI Y G
Sbjct: 131 HAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLE 190
Query: 449 HHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDS-IKGAYNLNLKVEHYS 507
L ++ M + PD+ TF + ACS + G+R IK N+ V+ S
Sbjct: 191 QEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVD--S 248
Query: 508 CLVDM 512
LVDM
Sbjct: 249 ALVDM 253
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 102/243 (41%), Gaps = 17/243 (6%)
Query: 220 YLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM------PDRNHV 273
Y +G LF + R++ WN MISG + E + ++ M PD+
Sbjct: 153 YALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQ--Y 210
Query: 274 SWTAMVSGLAQNKMVEVARKYFDIMPFK----DMAAWSAMITAYVDEKLLGEALELFNLV 329
++ ++ + +E ++ +M + ++ SA++ Y + +F+ +
Sbjct: 211 TFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQL 270
Query: 330 PEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCD--GMVEIMQ 387
+NV W ++I GY +G+ E L+ F M RP T ++T+C+ G+V+
Sbjct: 271 STRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGW 330
Query: 388 AH--AMVIHLGFEQNTWVTNALITLYSKSGDLCSAM-LVFELLKSKDVVSWTAMIVAYAN 444
H +M G E A++ ++G L A V + + W +++ A
Sbjct: 331 EHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRI 390
Query: 445 HGH 447
HG+
Sbjct: 391 HGN 393
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 218/428 (50%), Gaps = 40/428 (9%)
Query: 183 TTMVSGFAQNGLVDHARRFFDLMPEKNT--IAWTAMVKSYLDNGQFSEGYKLFLEMPERN 240
+ +V +A G + A FD M ++++ AW +++ Y + GQ+ + L+ +M E
Sbjct: 131 SKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDG 190
Query: 241 VR----SWNVMISGC--LSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKY 294
V+ ++ ++ C + + ++ EAIH +V+ Y
Sbjct: 191 VKPDRFTFPRVLKACGGIGSVQIGEAIH----------------------RDLVKEGFGY 228
Query: 295 FDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEAL 354
D+ +A++ Y + +A +F+++P K+ WN+++ GY+ +G EAL
Sbjct: 229 -------DVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEAL 281
Query: 355 RLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKS 414
+F LM+++ P ++S++ Q H VI G E V NALI LYSK
Sbjct: 282 DIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKR 341
Query: 415 GDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLL 474
G L A +F+ + +D VSW A+I A++ + +G L+ F +M + KPD ITFV +L
Sbjct: 342 GQLGQACFIFDQMLERDTVSWNAIISAHSKNSNG---LKYFEQMHRANAKPDGITFVSVL 398
Query: 475 SACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEI 534
S C++ G+V G R+F + Y ++ K+EHY+C+V++ GRAG++ EA ++ E
Sbjct: 399 SLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEA 458
Query: 535 DEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRK 594
V ALL AC LHGN + Q+L LEP + + LL Y+ ++ ++ +VR+
Sbjct: 459 GPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQ 518
Query: 595 RMKEKNVK 602
M ++ ++
Sbjct: 519 MMVDRGLE 526
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 160/351 (45%), Gaps = 32/351 (9%)
Query: 121 SAMVDGYAKAGRLDNAREVFDNMTERNA--FSWTSLISGYFRCGRTEEALQLFDQMSERS 178
S +V YA G + A EVFD M++R++ F+W SLISGY G+ E+A+ L+ QM+E
Sbjct: 131 SKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDG 190
Query: 179 V----VTWTTMVSGFAQNGLVDHARRFF-DLMPEK---NTIAWTAMVKSYLDNGQFSEGY 230
V T+ ++ G V DL+ E + A+V Y G +
Sbjct: 191 VKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKAR 250
Query: 231 KLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM------PDRNHVSWT-AMVSGLA 283
+F +P ++ SWN M++G L + EA+ +F M PD+ +S A V
Sbjct: 251 NVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFK 310
Query: 284 QNKMVE--VARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTII 341
+ + V R+ + +++ +A+I Y LG+A +F+ + E++ WN II
Sbjct: 311 HGRQLHGWVIRRGMEW----ELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAII 366
Query: 342 DGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC--DGMVEIMQA--HAMVIHLGF 397
+ +N L+ F M R+ +P T S+++ C GMVE + M G
Sbjct: 367 SAHSKN---SNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGI 423
Query: 398 EQNTWVTNALITLYSKSGDLCSA--MLVFELLKSKDVVSWTAMIVAYANHG 446
+ ++ LY ++G + A M+V E+ W A++ A HG
Sbjct: 424 DPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHG 474
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 113/265 (42%), Gaps = 54/265 (20%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMS----E 114
N + + + G + +AR +FD +P +D VS+NSM+ YL + +H A IF+ M E
Sbjct: 234 NALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIE 293
Query: 115 RDVVAQS--------------------------------AMVDGYAKAGRLDNAREVFDN 142
D VA S A++ Y+K G+L A +FD
Sbjct: 294 PDKVAISSVLARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQ 353
Query: 143 MTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHA 198
M ER+ SW ++IS + + L+ F+QM + +T+ +++S A G+V+
Sbjct: 354 MLERDTVSWNAIISAH---SKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDG 410
Query: 199 RRFFDLMPEKNTI-----AWTAMVKSYLDNGQFSEGYKLFL-EMP-ERNVRSWNVMISGC 251
R F LM ++ I + MV Y G E Y + + EM E W ++ C
Sbjct: 411 ERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYAC 470
Query: 252 LSANRVD----EAIHLFETMPDRNH 272
D A LFE PD H
Sbjct: 471 YLHGNTDIGEVAAQRLFELEPDNEH 495
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 147/353 (41%), Gaps = 66/353 (18%)
Query: 69 GKLKEARKLFDEMPQRDA--VSYNSMIAVYLKNKDVHGAETIFKAMSE------------ 114
G + A ++FD M +RD+ ++NS+I+ Y + A ++ M+E
Sbjct: 141 GYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPR 200
Query: 115 ------------------RDVVAQ---------SAMVDGYAKAGRLDNAREVFDNMTERN 147
RD+V + +A+V YAK G + AR VFD + ++
Sbjct: 201 VLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKD 260
Query: 148 AFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGL-VDHARRFFDLMP 206
SW S+++GY G EAL +F M + + +S L H R+ +
Sbjct: 261 YVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLHGWVI 320
Query: 207 EKNTIAW-----TAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAI 261
+ + W A++ Y GQ + +F +M ER+ SWN +IS + ++ +
Sbjct: 321 RRG-MEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIIS---AHSKNSNGL 376
Query: 262 HLFETMPDRNH----VSWTAMVSGLAQNKMVEVARKYFDIMPFK-----DMAAWSAMITA 312
FE M N +++ +++S A MVE + F +M + M ++ M+
Sbjct: 377 KYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNL 436
Query: 313 YVDEKLLGEALELF--NLVPEKNVGIWNTIIDGYVRNG--EAGE--ALRLFIL 359
Y ++ EA + + E +W ++ +G + GE A RLF L
Sbjct: 437 YGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFEL 489
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 52 DWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKD-VHGAETIFK 110
+W L N I + +RG+L +A +FD+M +RD VS+N++I+ + KN + + E + +
Sbjct: 325 EWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNGLKYFEQMHR 384
Query: 111 AMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFS-----WTSLISGYFRCGRTE 165
A ++ D + +++ A G +++ +F M++ + +++ Y R G E
Sbjct: 385 ANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMME 444
Query: 166 EALQLFDQMS--ERSVVTWTTMVSGFAQNGLVD----HARRFFDLMPE 207
EA + Q E W ++ +G D A+R F+L P+
Sbjct: 445 EAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPD 492
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/418 (31%), Positives = 221/418 (52%), Gaps = 19/418 (4%)
Query: 208 KNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNV----MISGCLSANRVDEAIHL 263
K + +++SYL G++ LF M +V+ N+ +I S+ V + L
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 264 FETMPDRNHVSW-----TAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKL 318
R + W T+ V + +E +RK FD + + A ++++ A
Sbjct: 109 HGQALKRGFL-WDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGE 167
Query: 319 LGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILML---RSCFRPCVTTMTSI 375
+ A E F +P +V W T+I+G+ + G +AL +F M+ R+ P T S+
Sbjct: 168 MDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSV 227
Query: 376 ITSC-----DGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSK 430
++SC G+ Q H V+ T + AL+ +Y K+GDL A+ +F+ ++ K
Sbjct: 228 LSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDK 287
Query: 431 DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVF 490
V +W A+I A A++G AL++F M +S P+ IT + +L+AC+ + LV+ G ++F
Sbjct: 288 KVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLF 347
Query: 491 DSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHG 550
SI Y + EHY C+VD++GRAGL+ +A + + ++ P E D +VL ALLGACK+H
Sbjct: 348 SSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSL-PFEPDASVLGALLGACKIHE 406
Query: 551 NIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFS 608
N ++ N++G++L+ L+P G YV LS A + W E ++RK M E ++KI +S
Sbjct: 407 NTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 110/229 (48%), Gaps = 19/229 (8%)
Query: 85 DAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMT 144
D S + Y + D+ + +F + VVA ++++D + G +D A E F M
Sbjct: 120 DPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMP 179
Query: 145 ERNAFSWTSLISGYFRCGRTEEALQLFDQM--SERSVVT--WTTMVS------GFAQNGL 194
+ SWT++I+G+ + G +AL +F +M +ER+V+T T VS F Q G
Sbjct: 180 VTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGG- 238
Query: 195 VDHARRFFDLMPEKNTIAWTAMVKSYLD----NGQFSEGYKLFLEMPERNVRSWNVMISG 250
+ ++ + K I T + + LD G +F ++ ++ V +WN +IS
Sbjct: 239 IRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISA 298
Query: 251 CLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYF 295
S R +A+ +FE M N ++ A+++ A++K+V++ + F
Sbjct: 299 LASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLF 347
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 148/341 (43%), Gaps = 33/341 (9%)
Query: 69 GKLKEARKLFDEM----PQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSER----DVVAQ 120
G+ K + LF M Q + +++ S+I + V + +R D Q
Sbjct: 65 GEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQ 124
Query: 121 SAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVV 180
++ V Y + G L+++R++FD++ + SL+ R G + A + F +M VV
Sbjct: 125 TSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVV 184
Query: 181 TWTTMVSGFAQNGLVDHARRFFDLM---------PEKNTIAWTAMVKSYLDNGQFSEGYK 231
+WTT+++GF++ GL A F M P + T + D G G +
Sbjct: 185 SWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQ 244
Query: 232 LFLEMPERNVRSWNVMISGCLS----ANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKM 287
+ + + + + + L A ++ A+ +F+ + D+ +W A++S LA N
Sbjct: 245 IHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGR 304
Query: 288 VEVARKYFDIMP----FKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGI-----WN 338
+ A + F++M + A++TA KL+ ++LF+ + + I +
Sbjct: 305 PKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYG 364
Query: 339 TIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC 379
++D R G +A FI L F P + + +++ +C
Sbjct: 365 CVVDLIGRAGLLVDAAN-FIQSLP--FEPDASVLGALLGAC 402
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 134/295 (45%), Gaps = 29/295 (9%)
Query: 66 GRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVD 125
G G L+ +RK+FD++ V+ NS++ +N ++ A F+ M DVV+ + +++
Sbjct: 132 GEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVIN 191
Query: 126 GYAKAGRLDNAREVFDNMTER-------NAFSWTSLIS--GYFRCGRTEEALQLFDQMSE 176
G++K G A VF M + N ++ S++S F G Q+ +
Sbjct: 192 GFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMS 251
Query: 177 RSVVTWTTMVSG----FAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKL 232
+ ++ TT+ + + + G ++ A FD + +K AW A++ + NG+ + ++
Sbjct: 252 KEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEM 311
Query: 233 FLEMPERNVRSWNV----MISGCLSANRVDEAIHLFET-------MPDRNHVSWTAMVSG 281
F M V + +++ C + VD I LF + +P H + +V
Sbjct: 312 FEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEH--YGCVVDL 369
Query: 282 LAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGI 336
+ + ++ A + +PF+ A +++ A + + E EL N V ++ +G+
Sbjct: 370 IGRAGLLVDAANFIQSLPFEPDA---SVLGALLGACKIHENTELGNTVGKQLIGL 421
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 200 bits (509), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 193/342 (56%), Gaps = 9/342 (2%)
Query: 320 GEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLR-SCFRPCVTTMTSIITS 378
G A ++ ++NV WN +I GYVRN + EAL+ ML + +P + S + +
Sbjct: 115 GLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAA 174
Query: 379 CDGMVEIMQA---HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSW 435
C + ++ A H+++I G E N +++AL+ +Y+K GD+ ++ VF +K DV W
Sbjct: 175 CARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIW 234
Query: 436 TAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKG 495
AMI +A HG A++VF+ M PD ITF+GLL+ CSH GL+ +G+ F +
Sbjct: 235 NAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSR 294
Query: 496 AYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVA 555
+++ K+EHY +VD+LGRAG V EA +++ ++P E D + +LL + + + N ++
Sbjct: 295 RFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPI-EPDVVIWRSLLSSSRTYKNPELG 353
Query: 556 NSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGK 615
Q +L SG YVLLSN Y++ ++W+ +VR+ M ++ ++K G S ++ G
Sbjct: 354 EIAIQ---NLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGM 410
Query: 616 NHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPENSLLI 657
H F G+ SH + + IY L+ +Q + G+ + L++
Sbjct: 411 IHRFKAGDTSHIETKAIYKVLEGLIQK-TKSQGFVSDTDLVL 451
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 116/253 (45%), Gaps = 25/253 (9%)
Query: 123 MVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVV-- 180
+++ K G A++V N +++N +W +I GY R + EEAL+ M + +
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 181 ---TWTTMVSGFAQNGLVDHARRFFDLMP----EKNTIAWTAMVKSYLDNGQFSEGYKLF 233
++ + ++ A+ G + HA+ LM E N I +A+V Y G ++F
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 234 LEMPERNVRSWNVMISGCLSANRVDEAIHLFETM------PDRNHVSWTAMVSGLAQNKM 287
+ +V WN MI+G + EAI +F M PD +++ +++ + +
Sbjct: 224 YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPD--SITFLGLLTTCSHCGL 281
Query: 288 VEVARKYFDIMPFK-----DMAAWSAMITAYVDEKLLGEALELFNLVP-EKNVGIWNTII 341
+E ++YF +M + + + AM+ + EA EL +P E +V IW +++
Sbjct: 282 LEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Query: 342 DG--YVRNGEAGE 352
+N E GE
Sbjct: 342 SSSRTYKNPELGE 354
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 94/193 (48%), Gaps = 16/193 (8%)
Query: 71 LKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMS----ERDVVAQSAMVDG 126
LK D P + S+ S +A + D+H A+ + M E + + SA+VD
Sbjct: 152 LKNMLSFTDIKPNK--FSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDV 209
Query: 127 YAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTW 182
YAK G + +REVF ++ + W ++I+G+ G EA+++F +M V +T+
Sbjct: 210 YAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITF 269
Query: 183 TTMVSGFAQNGLVDHARRFFDLMPEKNTIA-----WTAMVKSYLDNGQFSEGYKLFLEMP 237
+++ + GL++ + +F LM + +I + AMV G+ E Y+L MP
Sbjct: 270 LGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMP 329
Query: 238 -ERNVRSWNVMIS 249
E +V W ++S
Sbjct: 330 IEPDVVIWRSLLS 342
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 136/323 (42%), Gaps = 48/323 (14%)
Query: 153 SLISGYFRCGRTEEALQL---FDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKN 209
S ++ Y RC R+ A +L F +S V ++ + G A++ ++N
Sbjct: 70 STVAAYRRCNRSYLARRLLLWFLSLSP-GVCNINLIIESLMKIGESGLAKKVLRNASDQN 128
Query: 210 TIAWTAMVKSYLDNGQFSEGYKLFLEMPE-RNVRSWNVMISGCLSANRVDEAIHLFETMP 268
I W M+ Y+ N Q+ E K M +++ + L+A +
Sbjct: 129 VITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAA---------CARLG 179
Query: 269 DRNHVSWTAMV---SGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALEL 325
D +H W + SG+ N ++ SA++ Y +G + E+
Sbjct: 180 DLHHAKWVHSLMIDSGIELNAILS-----------------SALVDVYAKCGDIGTSREV 222
Query: 326 FNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCD--GMV 383
F V +V IWN +I G+ +G A EA+R+F M P T ++T+C G++
Sbjct: 223 FYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLL 282
Query: 384 EIMQAHAMVIHLGFEQNTWVTN--ALITLYSKSGDLCSAMLVFELLKS----KDVVSWTA 437
E + + ++ F + + A++ L ++G + A +EL++S DVV W +
Sbjct: 283 EEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEA---YELIESMPIEPDVVIWRS 339
Query: 438 MIVA---YANHGHGHHALQVFAR 457
++ + Y N G A+Q ++
Sbjct: 340 LLSSSRTYKNPELGEIAIQNLSK 362
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 173/312 (55%), Gaps = 4/312 (1%)
Query: 302 DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILML 361
D +A++ Y + L EA LF + E ++ WNT++ Y + E + +L +
Sbjct: 149 DRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFM 208
Query: 362 RSCFRPCVTTMTSIITSCDGMVEIMQ---AHAMVIHLGFEQNTWVTNALITLYSKSGDLC 418
R RP ++ ++I SC + E ++ AH V+ N +V +LI LYSK G L
Sbjct: 209 RMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLS 268
Query: 419 SAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACS 478
A VF+ + +DV + AMI A HG G ++++ +++ G PD TFV +SACS
Sbjct: 269 FARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACS 328
Query: 479 HAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAV 538
H+GLV++G ++F+S+K Y + KVEHY CLVD+LGR+G + EA + + + P + + +
Sbjct: 329 HSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKM-PVKPNATL 387
Query: 539 LVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKE 598
+ LG+ + HG+ + + LL LE +SG YVLLSN YA +W + + R+ MK+
Sbjct: 388 WRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKD 447
Query: 599 KNVKKISGFSQI 610
V K G S +
Sbjct: 448 HRVNKSPGISTL 459
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 120/269 (44%), Gaps = 27/269 (10%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETI---FKAMSER-DVVAQSAMV 124
GKL+EAR LF+ + + D ++N+++A Y ++++ E + F M R + ++ A++
Sbjct: 164 GKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALI 223
Query: 125 DGYAKAGRLDNAR----EVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVV 180
A G V N N F TSLI Y +CG A ++FD+MS+R V
Sbjct: 224 KSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVS 283
Query: 181 TWTTMVSGFAQNGLVDHARRFFD------LMPEKNTIAWTAMVKSYLDNGQFSEGYKLFL 234
+ M+ G A +G + L+P+ T T S+ +G EG ++F
Sbjct: 284 CYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSH--SGLVDEGLQIFN 341
Query: 235 EMP-----ERNVRSWNVMISGCLSANRVDEAIHLFETMPDR-NHVSWTAMVSGLAQN--- 285
M E V + ++ + R++EA + MP + N W + + G +Q
Sbjct: 342 SMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFL-GSSQTHGD 400
Query: 286 -KMVEVARKYFDIMPFKDMAAWSAMITAY 313
+ E+A K+ + F++ + + Y
Sbjct: 401 FERGEIALKHLLGLEFENSGNYVLLSNIY 429
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 319 LGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGE---ALRLF--ILMLRSCF-RPCVTTM 372
L AL + +P +V ++NT+I V N + + A L+ IL RS F RP T
Sbjct: 56 LSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTY 115
Query: 373 TSIITSCDGMVEIMQAHAMVIH---LGF----EQNTWVTNALITLYSKSGDLCSAMLVFE 425
S+ + G H +H L F + +V AL+ Y+ G L A +FE
Sbjct: 116 PSLFKA-SGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFE 174
Query: 426 LLKSKDVVSWTAMIVAYANH---GHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGL 482
++ D+ +W ++ AYAN L +F RM +P+E++ V L+ +C++ G
Sbjct: 175 RIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM---QVRPNELSLVALIKSCANLGE 231
Query: 483 VNQGRRVFDSIKGAYNLNLKVEHY--SCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLV 540
+G V+ + N NL + + + L+D+ + G ++ A V + S+ D +
Sbjct: 232 FVRG--VWAHVYVLKN-NLTLNQFVGTSLIDLYSKCGCLSFARKVFDEM--SQRDVSCYN 286
Query: 541 ALLGACKLHGNIKVANSIGQKLLS--LEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMK 597
A++ +HG + + + L+S L P S +V+ +A + DE Q+ MK
Sbjct: 287 AMIRGLAVHGFGQEGIELYKSLISQGLVP-DSATFVVTISACSHSGLVDEGLQIFNSMK 344
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 211/414 (50%), Gaps = 19/414 (4%)
Query: 211 IAWTAMVKSYLDNGQFSEGYKLFLEMPER-----NVRSWNVMISGCLSANR--VDEAIHL 263
I+ T + SY + G + LFL+M + +++ + C +A R + ++H
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHA 72
Query: 264 FETMPD--RNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGE 321
+ N A++ + V ARK FD +P ++ W+AMI+ Y + E
Sbjct: 73 HSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKE 132
Query: 322 ALELF---NLVPEKNVGIWNTIIDGYVRNGEAG-EALRLFILMLRSCFRPCVTTMTSIIT 377
A+EL+ +++P N +N II G V + A+ + M+ F+P + T+ ++++
Sbjct: 133 AVELYEAMDVMP--NESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVS 190
Query: 378 SCDGMVE---IMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVS 434
+C + I + H+ E + + + L+ Y + G + LVF+ ++ +DVV+
Sbjct: 191 ACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVA 250
Query: 435 WTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIK 494
W+++I AYA HG AL+ F M + PD+I F+ +L ACSHAGL ++ F ++
Sbjct: 251 WSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQ 310
Query: 495 GAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKV 554
G Y L +HYSCLVD+L R G EA V+ +P + ALLGAC+ +G I++
Sbjct: 311 GDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAK-TWGALLGACRNYGEIEL 369
Query: 555 ANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFS 608
A ++LL +EP + YVLL Y + + +E ++R +MKE VK G S
Sbjct: 370 AEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 135/288 (46%), Gaps = 32/288 (11%)
Query: 122 AMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMS-ERSVV 180
A++D Y K + +AR++FD + +RNA W ++IS Y CG+ +EA++L++ M +
Sbjct: 88 ALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNES 147
Query: 181 TWTTMVSGF--AQNG---LVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQF-------SE 228
++ ++ G ++G ++ R+ + + N I A+V + G F S
Sbjct: 148 SFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSY 207
Query: 229 GYKLFLEMPERNVRSWNVMISG-CLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKM 287
++ +E P ++S V G C S V +F++M DR+ V+W++++S A +
Sbjct: 208 AFRNLIE-PHPQLKSGLVEAYGRCGSIVYVQ---LVFDSMEDRDVVAWSSLISAYALHGD 263
Query: 288 VEVARKYFDIMPF----KDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGI------W 337
E A K F M D A+ ++ A L EAL F + + + G+ +
Sbjct: 264 AESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRM-QGDYGLRASKDHY 322
Query: 338 NTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI 385
+ ++D R G EA ++ M +P T +++ +C EI
Sbjct: 323 SCLVDVLSRVGRFEEAYKVIQAMPE---KPTAKTWGALLGACRNYGEI 367
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 119/281 (42%), Gaps = 51/281 (18%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMS-------- 113
+ + G+ + ARKLFDE+PQR+AV +N+MI+ Y V A +++AM
Sbjct: 90 LDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSF 149
Query: 114 -----------------------------ERDVVAQSAMVDGYAKAGRLDNAREV----F 140
+ +++ A+V + G +E+ F
Sbjct: 150 NAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAF 209
Query: 141 DNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARR 200
N+ E + + L+ Y RCG +FD M +R VV W++++S +A +G + A +
Sbjct: 210 RNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALK 269
Query: 201 FFDLMP----EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMP-ERNVRS----WNVMISGC 251
F M + IA+ ++K+ G E F M + +R+ ++ ++
Sbjct: 270 TFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVL 329
Query: 252 LSANRVDEAIHLFETMPDRNHV-SWTAMVSGLAQNKMVEVA 291
R +EA + + MP++ +W A++ +E+A
Sbjct: 330 SRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELA 370
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 111/235 (47%), Gaps = 28/235 (11%)
Query: 147 NAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFF---D 203
N F +L+ Y +C A +LFD++ +R+ V W M+S + G V A + D
Sbjct: 82 NPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMD 141
Query: 204 LMPEKNTIAWTAMVKSYL--DNGQFS--EGYKLFLEMP-ERNVRSWNVMISGC--LSANR 256
+MP N ++ A++K + ++G + E Y+ +E + N+ + ++S C + A R
Sbjct: 142 VMP--NESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFR 199
Query: 257 VDEAIH--LFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYV 314
+ + IH F + + + + +V + + + FD M +D+ AWS++I+AY
Sbjct: 200 LIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYA 259
Query: 315 DEKLLGEA---------LELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILM 360
L G+A +EL + P+ ++ N ++ G A EAL F M
Sbjct: 260 ---LHGDAESALKTFQEMELAKVTPD-DIAFLN-VLKACSHAGLADEALVYFKRM 309
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 158/556 (28%), Positives = 258/556 (46%), Gaps = 85/556 (15%)
Query: 116 DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMS 175
+VV ++++VD Y++ ++++A V ++ E++ F WTS++SG+ R R +EA+ F +M
Sbjct: 258 NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMR 317
Query: 176 ERSV----VTWTTMVS---------------------GFAQ-----NGLVD--------- 196
+ T++ ++S GF N LVD
Sbjct: 318 SLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASE 377
Query: 197 -HARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSA- 254
A R F M N ++WT ++ +D+G + + L +EM +R V V +SG L A
Sbjct: 378 VEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRAC 437
Query: 255 ------NRVDEAIH--LFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAW 306
RV E IH L D V ++V A ++ V+ A M +D +
Sbjct: 438 SKLRHVRRVLE-IHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITY 496
Query: 307 SAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFR 366
++++T + + AL + N + G+ +R+ L L
Sbjct: 497 TSLVTRFNELGKHEMALSVINYM--------------------YGDGIRMDQLSL----- 531
Query: 367 PCVTTMTSIITSCDGMVEI-MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFE 425
P + ++ + G +E H + GF V N+L+ +YSK G L A VFE
Sbjct: 532 PGFISASANL----GALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFE 587
Query: 426 LLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQ 485
+ + DVVSW ++ A++G AL F M T+PD +TF+ LLSACS+ L +
Sbjct: 588 EIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDL 647
Query: 486 GRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVST--IPPSEIDEAVLVALL 543
G F +K YN+ +VEHY LV +LGRAG + EA VV T + P+ + + LL
Sbjct: 648 GLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAM---IFKTLL 704
Query: 544 GACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKK 603
AC+ GN+ + + K L+L P+ Y+LL++ Y + + + R M EK + K
Sbjct: 705 RACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSK 764
Query: 604 ISGFSQIQVKGKNHLF 619
G S ++V+GK H F
Sbjct: 765 KLGKSTVEVQGKVHSF 780
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 185/386 (47%), Gaps = 26/386 (6%)
Query: 127 YAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQM----SERSVVTW 182
Y K + NAR++FD M+ R F+WT +IS + + AL LF++M + + T+
Sbjct: 68 YLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTF 127
Query: 183 TTMVSGFAQNGLVDHARRFFDLMP----EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPE 238
+++V A + + R + E N++ +++ Y GQF E +LF +
Sbjct: 128 SSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQN 187
Query: 239 RNVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVS-----GLAQNKMVE 289
+ SW +MIS + A + EA+ + M N ++ ++ GL K +
Sbjct: 188 ADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIH 247
Query: 290 VARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGE 349
+ +P ++ ++++ Y + +A+ + N E++V +W +++ G+VRN
Sbjct: 248 -SNIIVRGIPL-NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLR 305
Query: 350 AGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI---MQAHAMVIHLGFEQNTWVTNA 406
A EA+ F+ M +P T ++I++ C + + Q H+ I +GFE +T V NA
Sbjct: 306 AKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNA 365
Query: 407 LITLYSK-SGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKP 465
L+ +Y K S A VF + S +VVSWT +I+ +HG + MV +P
Sbjct: 366 LVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEP 425
Query: 466 DEITFVGLLSACSHAGLVNQGRRVFD 491
+ +T G+L ACS + RRV +
Sbjct: 426 NVVTLSGVLRACSK---LRHVRRVLE 448
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 115/521 (22%), Positives = 228/521 (43%), Gaps = 63/521 (12%)
Query: 74 ARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSE------------------- 114
ARKLFDEM R ++ MI+ + K+++ A ++F+ M
Sbjct: 77 ARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAG 136
Query: 115 -RDV-------------------VAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSL 154
RD+ V S++ D Y+K G+ A E+F ++ + SWT +
Sbjct: 137 LRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMM 196
Query: 155 ISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGL----VDHARRFFDLMP 206
IS + EALQ + +M + V T+ ++ + GL H+ +P
Sbjct: 197 ISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIP 256
Query: 207 EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFET 266
N + T++V Y + + ++ E++V W ++SG + R EA+ F
Sbjct: 257 -LNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLE 315
Query: 267 MPD----RNHVSWTAMVSGLAQNKMVEVARKYFD---IMPFKDMA-AWSAMITAYVD-EK 317
M N+ +++A++S + + ++ ++ + F+D +A++ Y+
Sbjct: 316 MRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSA 375
Query: 318 LLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIIT 377
EA +F + NV W T+I G V +G + L + M++ P V T++ ++
Sbjct: 376 SEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLR 435
Query: 378 SCDGM---VEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVS 434
+C + +++ HA ++ + V N+L+ Y+ S + A V +K +D ++
Sbjct: 436 ACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNIT 495
Query: 435 WTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFD-SI 493
+T+++ + G AL V M G + D+++ G +SA ++ G + G+ + S+
Sbjct: 496 YTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSV 555
Query: 494 KGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEI 534
K ++ V + LVDM + G + +A V I ++
Sbjct: 556 KSGFSGAASV--LNSLVDMYSKCGSLEDAKKVFEEIATPDV 594
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 114/223 (51%), Gaps = 5/223 (2%)
Query: 309 MITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPC 368
+++ Y+ + A +LF+ + + V W +I + ++ E AL LF M+ S P
Sbjct: 64 LLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPN 123
Query: 369 VTTMTSIITSCDGMVEIM---QAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFE 425
T +S++ SC G+ +I + H VI GFE N+ V ++L LYSK G A +F
Sbjct: 124 EFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFS 183
Query: 426 LLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQ 485
L++ D +SWT MI + ALQ ++ MV +G P+E TFV LL A S GL
Sbjct: 184 SLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-EF 242
Query: 486 GRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVST 528
G+ + +I + L V + LVD + + +A+ V+++
Sbjct: 243 GKTIHSNII-VRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNS 284
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 131/304 (43%), Gaps = 13/304 (4%)
Query: 220 YLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM----PDRNHVSW 275
YL KLF EM R V +W VMIS + A+ LFE M N ++
Sbjct: 68 YLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTF 127
Query: 276 TAMVSGLAQNKMVEVA-RKYFDIMPFK---DMAAWSAMITAYVDEKLLGEALELFNLVPE 331
+++V A + + R + ++ + S++ Y EA ELF+ +
Sbjct: 128 SSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQN 187
Query: 332 KNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSII--TSCDGMVEIMQAH 389
+ W +I V + EAL+ + M+++ P T ++ +S G+ H
Sbjct: 188 ADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIH 247
Query: 390 AMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGH 449
+ +I G N + +L+ YS+ + A+ V +DV WT+++ + +
Sbjct: 248 SNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAK 307
Query: 450 HALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFD-SIKGAYNLNLKVEHYSC 508
A+ F M + G +P+ T+ +LS CS ++ G+++ +IK + + V +
Sbjct: 308 EAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGN--A 365
Query: 509 LVDM 512
LVDM
Sbjct: 366 LVDM 369
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 386 MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANH 445
+ H VI G +N + N L++LY K+ + +A +F+ + + V +WT MI A+
Sbjct: 43 LHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKS 102
Query: 446 GHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDS-IKGAYNLNLKVE 504
AL +F M+ SGT P+E TF ++ +C+ ++ G RV S IK + N V
Sbjct: 103 QEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVG 162
Query: 505 HYSCLVDMLGRAGLVNEAMDVVSTI 529
S L D+ + G EA ++ S++
Sbjct: 163 --SSLSDLYSKCGQFKEACELFSSL 185
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/470 (28%), Positives = 223/470 (47%), Gaps = 52/470 (11%)
Query: 195 VDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNV------------- 241
++ A + FD MP+ + I+W ++V Y+ +G+F EG LFLE+ +V
Sbjct: 106 LEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAA 165
Query: 242 ----------------------RSWNVMISGCL-----SANRVDEAIHLFETMPDRNHVS 274
NV++ CL +D+A+ +F+ M +++ VS
Sbjct: 166 CARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVS 225
Query: 275 WTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNV 334
W A+V+ ++N +E+ +F MP D ++ +I A+V A ++ + +P N
Sbjct: 226 WNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNS 285
Query: 335 GIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQA---HAM 391
WNTI+ GYV + ++GEA F M S R +++ ++ + + + HA
Sbjct: 286 SSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHAC 345
Query: 392 VIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHA 451
LG + V +ALI +YSK G L A L+F + K+++ W MI YA +G A
Sbjct: 346 AHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEA 405
Query: 452 LQVFARMVTSG-TKPDEITFVGLLSACSHAGL---VNQGRRVFDSIKGAYNLNLKVEHYS 507
+++F ++ KPD TF+ LL+ CSH + V G F+ + Y + VEH
Sbjct: 406 IKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLG--YFEMMINEYRIKPSVEHCC 463
Query: 508 CLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEP 567
L+ +G+ G V +A V+ D ALLGAC ++K A ++ K++ L
Sbjct: 464 SLIRAMGQRGEVWQAKQVIQEFGFG-YDGVAWRALLGACSARKDLKAAKTVAAKMIELGD 522
Query: 568 TSSGG--YVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGK 615
Y+++SN YA E+W E Q+RK M+E V K G S I + K
Sbjct: 523 ADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWIDSRTK 572
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 199/437 (45%), Gaps = 47/437 (10%)
Query: 71 LKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQS-AMVDGYAK 129
L++A K+FDEMP D +S+NS+++ Y+++ +F + DV + A
Sbjct: 106 LEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAA 165
Query: 130 AGRLD--------NAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVT 181
RL +++ V + + N LI Y +CG ++A+ +F M E+ V+
Sbjct: 166 CARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVS 225
Query: 182 WTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNV 241
W +V+ ++NG ++ FF MP +T+ + ++ +++ +G F+ +++ +MP N
Sbjct: 226 WNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNS 285
Query: 242 RSWNVMISGCLSANRVDEAIHLFETMP------DRNHVS-------------WTAMVSGL 282
SWN +++G +++ + EA F M D +S W +++
Sbjct: 286 SSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHAC 345
Query: 283 AQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIID 342
A ++ + SA+I Y +L A +F +P KN+ +WN +I
Sbjct: 346 AHKLGLD-----------SRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMIS 394
Query: 343 GYVRNGEAGEALRLFILMLRSCF----RPCVTTMTSIITSCDGMVEIMQAH--AMVIHLG 396
GY RNG++ EA++LF + + F R + ++ + C+ +E+M + M+
Sbjct: 395 GYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYR 454
Query: 397 FEQNTWVTNALITLYSKSGDLCSAMLVF-ELLKSKDVVSWTAMIVAYANHGHGHHALQVF 455
+ + +LI + G++ A V E D V+W A++ A + A V
Sbjct: 455 IKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVA 514
Query: 456 ARMVTSG-TKPDEITFV 471
A+M+ G DE ++
Sbjct: 515 AKMIELGDADKDEYLYI 531
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 39/219 (17%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVV 118
N I + G+ G + +A +F M ++D VS+N+++A +N + F M D V
Sbjct: 196 NCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTV 255
Query: 119 AQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMS--- 175
+ ++D + K+G +NA +V +M N+ SW ++++GY ++ EA + F +M
Sbjct: 256 TYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSG 315
Query: 176 ------------------------------------ERSVVTWTTMVSGFAQNGLVDHAR 199
+ VV + ++ +++ G++ HA
Sbjct: 316 VRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAE 375
Query: 200 RFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPE 238
F MP KN I W M+ Y NG E KLF ++ +
Sbjct: 376 LMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQ 414
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 138/511 (27%), Positives = 253/511 (49%), Gaps = 57/511 (11%)
Query: 150 SWTSLISGYFRCG-----RTEEALQLFDQMSERSVVTWTTMVSGFAQ----NGLVDHARR 200
SW SLI RC ++ +L + + R+ + +++ F N +A
Sbjct: 10 SWKSLILASQRCNTVKQIKSTHSLFIIHGL-HRNTYAISKLLTAFLHLPNLNKHFHYASS 68
Query: 201 FFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEM---PERNVR----SWNVMISGCLS 253
FD + N+ + M++ + Q G + FL M E ++ +++ +I CL
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLK 128
Query: 254 AN--RVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMIT 311
A V + IH W V F D + ++
Sbjct: 129 ACFFSVGKQIH-----------CWV-------------VKNGVF----LSDSHVQTGVLR 160
Query: 312 AYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTT 371
YV++KLL +A ++F+ +P+ +V W+ +++GYVR G E L +F ML P +
Sbjct: 161 IYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFS 220
Query: 372 MTSIITSCDGMVEIMQA---HAMVIHLGF-EQNTWVTNALITLYSKSGDLCSAMLVFELL 427
+T+ +T+C + + Q H V + E + +V AL+ +Y+K G + +A+ VF+ L
Sbjct: 221 VTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKL 280
Query: 428 KSKDVVSWTAMIVAYANHGHGHHALQVFARMV-TSGTKPDEITFVGLLSACSHAGLVNQG 486
++V SW A+I YA +G+ A+ R+ G KPD + +G+L+AC+H G + +G
Sbjct: 281 TRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEG 340
Query: 487 RRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGAC 546
R + ++++ Y + K EHYSC+VD++ RAG +++A++++ +P + +V ALL C
Sbjct: 341 RSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPL-ASVWGALLNGC 399
Query: 547 KLHGNIKVANSIGQKLLSLEPTS----SGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVK 602
+ H N+++ + LL LE + V LSN Y + ++ E ++VR ++++ V+
Sbjct: 400 RTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVR 459
Query: 603 KISGFSQIQVKGKNHLFFVGERSHPQVEEIY 633
K G+S ++V G F G+ SHP + +I+
Sbjct: 460 KTPGWSVLEVDGNVTKFVSGDVSHPNLLQIH 490
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 140/322 (43%), Gaps = 21/322 (6%)
Query: 272 HVSWTAMVSGLAQN-----KMVEVARKYFDIMPF-KDMAAWSAMITAYVD----EKLLGE 321
H SW +++ LA K ++ F I ++ A S ++TA++ K
Sbjct: 8 HQSWKSLI--LASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHY 65
Query: 322 ALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRS---CFRPCVTTMTSIITS 378
A +F+ + N +++T+I R+ + LR F+LM++ P T +I +
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVA 125
Query: 379 CDGMVEI---MQAHAMVIHLG-FEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVS 434
C Q H V+ G F ++ V ++ +Y + L A VF+ + DVV
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVK 185
Query: 435 WTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIK 494
W ++ Y G G L+VF M+ G +PDE + L+AC+ G + QG+ + + +K
Sbjct: 186 WDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVK 245
Query: 495 GAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKV 554
+ V + LVDM + G + A++V + + AL+G +G K
Sbjct: 246 KKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFS--WAALIGGYAAYGYAKK 303
Query: 555 ANSIGQKLLSLEPTSSGGYVLL 576
A + ++L + VLL
Sbjct: 304 AMTCLERLEREDGIKPDSVVLL 325
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 100/239 (41%), Gaps = 51/239 (21%)
Query: 71 LKEARKLFDEMPQRDAVSYNSMIAVYLK-------------------NKDVHGAETIFKA 111
L +ARK+FDE+PQ D V ++ ++ Y++ D T A
Sbjct: 168 LLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTA 227
Query: 112 MS---------------------ERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFS 150
+ E DV +A+VD YAK G ++ A EVF +T RN FS
Sbjct: 228 CAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFS 287
Query: 151 WTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMV-----SGFAQNGLVDHARRFFDLM 205
W +LI GY G ++A+ +++ + ++V + A G ++ R + M
Sbjct: 288 WAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENM 347
Query: 206 PEKNTIA-----WTAMVKSYLDNGQFSEGYKLFLEMPERNVRS-WNVMISGCLSANRVD 258
+ I ++ +V G+ + L +MP + + S W +++GC + V+
Sbjct: 348 EARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVE 406
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 115/263 (43%), Gaps = 30/263 (11%)
Query: 116 DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQM- 174
D Q+ ++ Y + L +AR+VFD + + + W L++GY RCG E L++F +M
Sbjct: 151 DSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREML 210
Query: 175 ---SERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTI-----AWTAMVKSYLDNGQF 226
E + TT ++ AQ G + + + + +K+ I TA+V Y G
Sbjct: 211 VKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCI 270
Query: 227 SEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM-------PDRNHVSWTAMV 279
++F ++ RNV SW +I G + +A+ E + PD V ++
Sbjct: 271 ETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDS--VVLLGVL 328
Query: 280 SGLAQNKMVEVARKY-------FDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEK 332
+ A +E R ++I P + +S ++ L +AL L +P K
Sbjct: 329 AACAHGGFLEEGRSMLENMEARYEITPKHE--HYSCIVDLMCRAGRLDDALNLIEKMPMK 386
Query: 333 NVG-IWNTIIDGYV--RNGEAGE 352
+ +W +++G +N E GE
Sbjct: 387 PLASVWGALLNGCRTHKNVELGE 409
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 106/258 (41%), Gaps = 51/258 (19%)
Query: 85 DAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNM- 143
D+ ++ +Y+++K + A +F + + DVV +++GY + G EVF M
Sbjct: 151 DSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREML 210
Query: 144 ---------------------------------------TERNAFSWTSLISGYFRCGRT 164
E + F T+L+ Y +CG
Sbjct: 211 VKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCI 270
Query: 165 EEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMV-----KS 219
E A+++F +++ R+V +W ++ G+A G A + + ++ I ++V +
Sbjct: 271 ETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAA 330
Query: 220 YLDNGQFSEGYKLFLEMPER-----NVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVS 274
G EG + M R ++ ++ A R+D+A++L E MP + S
Sbjct: 331 CAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLAS 390
Query: 275 -WTAMVSGLAQNKMVEVA 291
W A+++G +K VE+
Sbjct: 391 VWGALLNGCRTHKNVELG 408
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 138/515 (26%), Positives = 254/515 (49%), Gaps = 57/515 (11%)
Query: 150 SWTSLISGYFRCG-----RTEEALQLFDQMSERSVVTWTTMVSGFAQ----NGLVDHARR 200
SW SLI RC ++ +L + + R+ + +++ F N +A
Sbjct: 10 SWKSLILASQRCNTVKQIKSTHSLFIIHGL-HRNTYAISKLLTAFLHLPNLNKHFHYASS 68
Query: 201 FFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEM---PERNVR----SWNVMISGCLS 253
FD + N+ + M++ + Q G + FL M E ++ +++ +I CL
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLK 128
Query: 254 AN--RVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMIT 311
A V + IH + + +N + D + ++
Sbjct: 129 ACFFSVGKQIHCW-----------------VVKNGVF-----------LSDGHVQTGVLR 160
Query: 312 AYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTT 371
YV++KLL +A ++F+ +P+ +V W+ +++GYVR G E L +F ML P +
Sbjct: 161 IYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFS 220
Query: 372 MTSIITSCDGMVEIMQA---HAMVIHLGF-EQNTWVTNALITLYSKSGDLCSAMLVFELL 427
+T+ +T+C + + Q H V + E + +V AL+ +Y+K G + +A+ VFE L
Sbjct: 221 VTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKL 280
Query: 428 KSKDVVSWTAMIVAYANHGHGHHALQVFARMV-TSGTKPDEITFVGLLSACSHAGLVNQG 486
++V SW A+I YA +G+ A R+ G KPD + +G+L+AC+H G + +G
Sbjct: 281 TRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEG 340
Query: 487 RRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGAC 546
R + ++++ Y + K EHYSC+VD++ RAG +++A+D++ +P + +V ALL C
Sbjct: 341 RTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPL-ASVWGALLNGC 399
Query: 547 KLHGNIKVANSIGQKLLSLEPTS----SGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVK 602
+ H N+++ Q LL LE + V LSN Y + ++ E +VR ++++ ++
Sbjct: 400 RTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIR 459
Query: 603 KISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQ 637
K G+S ++V G F G+ SHP + +I+ +
Sbjct: 460 KTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLIH 494
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 132/303 (43%), Gaps = 21/303 (6%)
Query: 272 HVSWTAMVSGLAQN-----KMVEVARKYFDIMPF-KDMAAWSAMITAYVD----EKLLGE 321
H SW +++ LA K ++ F I ++ A S ++TA++ K
Sbjct: 8 HQSWKSLI--LASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHY 65
Query: 322 ALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRS---CFRPCVTTMTSIITS 378
A +F+ + N +++T+I R+ + LR F+LM++ P T +I +
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVA 125
Query: 379 CDGMVEI---MQAHAMVIHLG-FEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVS 434
C Q H V+ G F + V ++ +Y + L A VF+ + DVV
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVK 185
Query: 435 WTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIK 494
W ++ Y G G L+VF M+ G +PDE + L+AC+ G + QG+ + + +K
Sbjct: 186 WDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVK 245
Query: 495 GAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKV 554
+ V + LVDM + G + A++V + + AL+G +G K
Sbjct: 246 KKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFS--WAALIGGYAAYGYAKK 303
Query: 555 ANS 557
A +
Sbjct: 304 ATT 306
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 100/239 (41%), Gaps = 51/239 (21%)
Query: 71 LKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAM------------------ 112
L +ARK+FDE+PQ D V ++ ++ Y++ +FK M
Sbjct: 168 LFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTA 227
Query: 113 ----------------------SERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFS 150
E DV +A+VD YAK G ++ A EVF+ +T RN FS
Sbjct: 228 CAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFS 287
Query: 151 WTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMV-----SGFAQNGLVDHARRFFDLM 205
W +LI GY G ++A D++ + ++V + A G ++ R + M
Sbjct: 288 WAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENM 347
Query: 206 PEKNTIA-----WTAMVKSYLDNGQFSEGYKLFLEMPERNVRS-WNVMISGCLSANRVD 258
+ I ++ +V G+ + L +MP + + S W +++GC + V+
Sbjct: 348 EARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVE 406
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 105/258 (40%), Gaps = 51/258 (19%)
Query: 85 DAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNM- 143
D ++ +Y+++K + A +F + + DVV +++GY + G EVF M
Sbjct: 151 DGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEML 210
Query: 144 ---------------------------------------TERNAFSWTSLISGYFRCGRT 164
E + F T+L+ Y +CG
Sbjct: 211 VRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCI 270
Query: 165 EEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMV-----KS 219
E A+++F++++ R+V +W ++ G+A G A D + ++ I ++V +
Sbjct: 271 ETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAA 330
Query: 220 YLDNGQFSEGYKLFLEMPER-----NVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVS 274
G EG + M R ++ ++ A R+D+A+ L E MP + S
Sbjct: 331 CAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLAS 390
Query: 275 -WTAMVSGLAQNKMVEVA 291
W A+++G +K VE+
Sbjct: 391 VWGALLNGCRTHKNVELG 408
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 112/255 (43%), Gaps = 22/255 (8%)
Query: 120 QSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV 179
Q+ ++ Y + L +AR+VFD + + + W L++GY RCG E L++F +M R +
Sbjct: 155 QTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGI 214
Query: 180 ----VTWTTMVSGFAQNGLVDHARRFFDLMPEK-----NTIAWTAMVKSYLDNGQFSEGY 230
+ TT ++ AQ G + + + + +K + TA+V Y G
Sbjct: 215 EPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAV 274
Query: 231 KLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMV-----SGLAQN 285
++F ++ RNV SW +I G + +A + + + + ++V + A
Sbjct: 275 EVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHG 334
Query: 286 KMVEVARKYFDIMPFK-----DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVG-IWNT 339
+E R + M + +S ++ L +AL+L +P K + +W
Sbjct: 335 GFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGA 394
Query: 340 IIDGYV--RNGEAGE 352
+++G +N E GE
Sbjct: 395 LLNGCRTHKNVELGE 409
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 142/509 (27%), Positives = 246/509 (48%), Gaps = 45/509 (8%)
Query: 136 AREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVV----TWTTMVSGFAQ 191
A +F++++ N F + ++I GY E A +F+Q+ + + ++ T + ++
Sbjct: 78 ASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSR 137
Query: 192 NGLVDHARRFFDLMPEKNTIAWT----AMVKSYLDNGQFSEGYKLFLEMPER-NVRSWNV 246
V + + +T A++ Y G+ S+ K+F EMP+ + +++
Sbjct: 138 ELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFST 197
Query: 247 MISGCLSANRVDEAIHLFETMPDRNHV-------SWTAMVSGL-----AQNKMVEVARKY 294
+++G L ++ A+ LF M V S+ + +S L A++ V +
Sbjct: 198 LMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIG 257
Query: 295 FDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEAL 354
D+ D+ +A+I Y + A +F+ K+V WN +ID Y + G E +
Sbjct: 258 LDL----DLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECV 313
Query: 355 RLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQ----NTWVTNALITL 410
L M +P +T +++SC E V L E+ + + AL+ +
Sbjct: 314 WLLRQMKYEKMKPNSSTFVGLLSSC-AYSEAAFVGRTVADLLEEERIALDAILGTALVDM 372
Query: 411 YSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTK--PDEI 468
Y+K G L A+ +F +K KDV SWTAMI Y HG A+ +F +M K P+EI
Sbjct: 373 YAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEI 432
Query: 469 TFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVST 528
TF+ +L+ACSH GLV +G R F + AY+ KVEHY C+VD+LGRAG + EA +++
Sbjct: 433 TFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRN 492
Query: 529 IPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAA----EE 584
+P + D ALL AC+++GN + S+ +L + T +LL+ +A E+
Sbjct: 493 LPITS-DSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPEK 551
Query: 585 QWDEFAQVRKRMKEKNVKKISGFSQIQVK 613
D ++ K KE +G+S I+++
Sbjct: 552 SLDN--ELNKGRKE------AGYSAIEIE 572
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 163/410 (39%), Gaps = 88/410 (21%)
Query: 120 QSAMVDGYAKAGRLDNAREVFDNMTER-NAFSWTSLISGYFRCGRTEEALQLFDQMSERS 178
++A++ Y G++ +AR+VFD M + +A ++++L++GY + + AL LF M +
Sbjct: 163 RNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSE 222
Query: 179 VVT---------------------------------------WTTMVSGFAQNGLVDHAR 199
VV T ++ + + G + AR
Sbjct: 223 VVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSAR 282
Query: 200 RFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDE 259
R FD K+ + W M+ Y G E L +M ++ + G LS+ E
Sbjct: 283 RIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSE 342
Query: 260 AIHLFETMPD--------RNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMIT 311
A + T+ D + + TA+V A+ ++E A + F+ M KD+ +W+AMI+
Sbjct: 343 AAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMIS 402
Query: 312 AYVDEKLLGEALELFNLVPEKNVGI------WNTIIDGYVRNGEAGEALRLFILMLRSCF 365
Y L EA+ LFN + E+N + + +++ G E +R CF
Sbjct: 403 GYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIR--------CF 454
Query: 366 RPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAM-LVF 424
+ MVE V H G ++ L ++G L A L+
Sbjct: 455 KR--------------MVEAYSFTPKVEHYG---------CVVDLLGRAGQLEEAYELIR 491
Query: 425 ELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSG-TKP-DEITFVG 472
L + D +W A++ A +G+ V R+ G T P D I G
Sbjct: 492 NLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAG 541
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 114/262 (43%), Gaps = 48/262 (18%)
Query: 58 RNVEITILGRRGKLKEARKLFDEMPQR-DAVSYNSMIAVYLKNKDVHGAETIFKAMSERD 116
RN I GK+ +ARK+FDEMPQ DAV++++++ YL+ A +F+ M + +
Sbjct: 163 RNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSE 222
Query: 117 VVAQ---------------------------------------SAMVDGYAKAGRLDNAR 137
VV +A++ Y K G + +AR
Sbjct: 223 VVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSAR 282
Query: 138 EVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNG 193
+FD ++ +W +I Y + G EE + L QM + T+ ++S A +
Sbjct: 283 RIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSE 342
Query: 194 LVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMIS 249
R DL+ E+ + I TA+V Y G + ++F M +++V+SW MIS
Sbjct: 343 AAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMIS 402
Query: 250 GCLSANRVDEAIHLFETMPDRN 271
G + EA+ LF M + N
Sbjct: 403 GYGAHGLAREAVTLFNKMEEEN 424
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 112/258 (43%), Gaps = 55/258 (21%)
Query: 47 ISISHDWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAE 106
I I D L I + G+ G + AR++FD ++D V++N MI Y K +
Sbjct: 254 IKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECV 313
Query: 107 TIFKAMS------------------------------------ER---DVVAQSAMVDGY 127
+ + M ER D + +A+VD Y
Sbjct: 314 WLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMY 373
Query: 128 AKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV------VT 181
AK G L+ A E+F+ M +++ SWT++ISGY G EA+ LF++M E + +T
Sbjct: 374 AKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEIT 433
Query: 182 WTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSY---LD----NGQFSEGYKLFL 234
+ +++ + GLV R F M E ++T V+ Y +D GQ E Y+L
Sbjct: 434 FLVVLNACSHGGLVMEGIRCFKRMVE--AYSFTPKVEHYGCVVDLLGRAGQLEEAYELIR 491
Query: 235 EMP-ERNVRSWNVMISGC 251
+P + +W +++ C
Sbjct: 492 NLPITSDSTAWRALLAAC 509
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 112/248 (45%), Gaps = 30/248 (12%)
Query: 90 NSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNA----REVFDNMTE 145
++I +Y K + A IF +DVV + M+D YAK G L+ R++ +
Sbjct: 266 TALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMK 325
Query: 146 RNAFSWTSLISGYFRCGRTEEAL---QLFDQMSERSV----VTWTTMVSGFAQNGLVDHA 198
N+ ++ L+S C +E A + D + E + + T +V +A+ GL++ A
Sbjct: 326 PNSSTFVGLLSS---CAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKA 382
Query: 199 RRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVR------SWNVMISGCL 252
F+ M +K+ +WTAM+ Y +G E LF +M E N + ++ V+++ C
Sbjct: 383 VEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACS 442
Query: 253 SANRVDEAIHLFETM-------PDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPF-KDMA 304
V E I F+ M P H + +V L + +E A + +P D
Sbjct: 443 HGGLVMEGIRCFKRMVEAYSFTPKVEH--YGCVVDLLGRAGQLEEAYELIRNLPITSDST 500
Query: 305 AWSAMITA 312
AW A++ A
Sbjct: 501 AWRALLAA 508
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 175/321 (54%), Gaps = 20/321 (6%)
Query: 307 SAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGE--ALRLFILMLR-S 363
+ ++ Y L A ++F+ +PE+ WN +I GY + + G A + +L R S
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 364 C----FRPCVTTMTSIIT--SCDGMVEIMQ-AHAMVIHLGF--EQNTWVTNALITLYSKS 414
C RP TTM +++ S G++EI H + LGF E + ++ AL+ +YSK
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKC 270
Query: 415 GDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLL 474
G L +A VFEL+K K+V +WT+M A +G G+ + RM SG KP+EITF LL
Sbjct: 271 GCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLL 330
Query: 475 SACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEI 534
SA H GLV +G +F S+K + + +EHY C+VD+LG+AG + EA + +P
Sbjct: 331 SAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKP- 389
Query: 535 DEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTS---SGG----YVLLSNAYAAEEQWD 587
D +L +L AC ++G + IG+ LL +E SG YV LSN A + +W
Sbjct: 390 DAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWV 449
Query: 588 EFAQVRKRMKEKNVKKISGFS 608
E ++RK MKE+ +K G+S
Sbjct: 450 EVEKLRKEMKERRIKTRPGYS 470
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 101/230 (43%), Gaps = 61/230 (26%)
Query: 67 RRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKD------------------------- 101
+ G L+ ARK+FDEMP+R +V++N+MI Y +KD
Sbjct: 159 KNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRP 218
Query: 102 -----------------------VHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNARE 138
VHG E DV +A+VD Y+K G L+NA
Sbjct: 219 TDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFS 278
Query: 139 VFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGL 194
VF+ M +N F+WTS+ +G GR E L ++M+E + +T+T+++S + GL
Sbjct: 279 VFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGL 338
Query: 195 VDHARRFFDLMPEKNTIAWTAMVKSY---LD----NGQFSEGYKLFLEMP 237
V+ F M K T +++ Y +D G+ E Y+ L MP
Sbjct: 339 VEEGIELFKSM--KTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMP 386
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
Query: 389 HAMVIHLGF-EQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANH-G 446
H MV LGF ++ + L+ Y+K+GDL A VF+ + + V+W AMI Y +H
Sbjct: 134 HGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKD 193
Query: 447 HGHH----ALQVFARM--VTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSI-KGAYNL 499
G+H A+ +F R SG +P + T V +LSA S GL+ G V I K +
Sbjct: 194 KGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTP 253
Query: 500 NLKVEHYSCLVDMLGRAGLVNEAMDV 525
+ V + LVDM + G +N A V
Sbjct: 254 EVDVFIGTALVDMYSKCGCLNNAFSV 279
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 111/276 (40%), Gaps = 45/276 (16%)
Query: 139 VFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTW---------------- 182
VF + F + +L+ +C + E+++++F + +S + +
Sbjct: 66 VFPRFGHPDKFLFNTLL----KCSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARS 121
Query: 183 ---TTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPER 239
+ + G +G+V ++ + + T ++ Y NG K+F EMPER
Sbjct: 122 ASSSALRVGRIVHGMVKKLGFLYE-----SELIGTTLLHFYAKNGDLRYARKVFDEMPER 176
Query: 240 NVRSWNVMISGCLS-----ANRVDEAIHLFETMP------DRNHVSWTAMVSGLAQNKMV 288
+WN MI G S + +A+ LF + ++S ++Q ++
Sbjct: 177 TSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLL 236
Query: 289 EVA---RKYFDIMPFK---DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIID 342
E+ Y + + F D+ +A++ Y L A +F L+ KNV W ++
Sbjct: 237 EIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMAT 296
Query: 343 GYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITS 378
G NG E L M S +P T TS++++
Sbjct: 297 GLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSA 332
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/331 (35%), Positives = 181/331 (54%), Gaps = 15/331 (4%)
Query: 291 ARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEA 350
A K FD MP ++ W+ MIT + +AL +P + V W TIIDGY R +
Sbjct: 177 AHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKP 236
Query: 351 GEALRLFILMLRSC--FRPCVTTMTSIITSCDGMVEIM---QAHAMVIHLGF-EQNTWVT 404
EA+ LF M+ +C +P T+ +I+ + + ++ HA V GF + VT
Sbjct: 237 KEAILLFSRMV-ACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVT 295
Query: 405 NALITLYSKSGDLCSAMLVFELLKS--KDVVSWTAMIVAYANHGHGHHALQVFARMVTSG 462
N+LI Y+K G + SA F + + K++VSWT MI A+A HG G A+ +F M G
Sbjct: 296 NSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLG 355
Query: 463 TKPDEITFVGLLSACSHAGLVNQG-RRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNE 521
KP+ +T + +L+ACSH GL + F+++ Y + V+HY CLVDML R G + E
Sbjct: 356 LKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEE 415
Query: 522 AMDVVSTIPPSEIDEAVLV--ALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNA 579
A + IP I+E +V LLGAC ++ + ++A + +KL+ LE + G YVL+SN
Sbjct: 416 AEKIALEIP---IEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNI 472
Query: 580 YAAEEQWDEFAQVRKRMKEKNVKKISGFSQI 610
+ ++ + + RK+M + V K+ G SQ+
Sbjct: 473 FCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 95/223 (42%), Gaps = 45/223 (20%)
Query: 207 EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFET 266
E + TA+V YL G + +K+F EMPERN +WNVMI+G + ++A+ E
Sbjct: 155 ESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEK 214
Query: 267 MPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDM-------------AAW------- 306
MP+R VSWT ++ G A+ + A F M D A W
Sbjct: 215 MPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKM 274
Query: 307 ---------------------SAMITAYVDEKLLGEALELFNLVP--EKNVGIWNTIIDG 343
+++I AY + A + F +P KN+ W T+I
Sbjct: 275 CGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISA 334
Query: 344 YVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCD--GMVE 384
+ +G EA+ +F M R +P TM S++ +C G+ E
Sbjct: 335 FAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAE 377
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 22/265 (8%)
Query: 114 ERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQ 173
E V Q+A+V Y G + +A +VFD M ERN +W +I+G G E+AL ++
Sbjct: 155 ESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEK 214
Query: 174 MSERSVVTWTTMVSGFAQNGLVDHARRFFDLMP-----EKNTIAWTAMVKSYLDNGQFSE 228
M R+VV+WTT++ G+A+ A F M + N I A++ + + G
Sbjct: 215 MPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKM 274
Query: 229 GYKLFLEMPER-----NVRSWNVMISGCLSANRVDEAIHLFETMPD--RNHVSWTAMVSG 281
+ + +R ++R N +I + A F +P+ +N VSWT M+S
Sbjct: 275 CGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISA 334
Query: 282 LAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLG-----EALELFN-LVPE---- 331
A + M + A F M + + + ++ G E LE FN +V E
Sbjct: 335 FAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKIT 394
Query: 332 KNVGIWNTIIDGYVRNGEAGEALRL 356
+V + ++D R G EA ++
Sbjct: 395 PDVKHYGCLVDMLRRKGRLEEAEKI 419
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 124/278 (44%), Gaps = 30/278 (10%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYA 128
G + +A K+FDEMP+R+ V++N MI D A + M R VV+ + ++DGYA
Sbjct: 172 GNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYA 231
Query: 129 KAGRLDNAREVFDNMT-----ERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTW- 182
+ + A +F M + N + +++ + G + + + +R V
Sbjct: 232 RVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCD 291
Query: 183 ----TTMVSGFAQNGLVDHARRFFDLMP--EKNTIAWTAMVKSYLDNGQFSEGYKLFLEM 236
+++ +A+ G + A +FF +P KN ++WT M+ ++ +G E +F +M
Sbjct: 292 IRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDM 351
Query: 237 PERNVRSWNVMISGCLSANR-----VDEAIHLFETM-------PDRNHVSWTAMVSGLAQ 284
++ V + L+A +E + F TM PD H + +V L +
Sbjct: 352 ERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKH--YGCLVDMLRR 409
Query: 285 NKMVEVARKYFDIMPFKDMA-AWSAMITA---YVDEKL 318
+E A K +P ++ A W ++ A Y D +L
Sbjct: 410 KGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAEL 447
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 135/518 (26%), Positives = 227/518 (43%), Gaps = 66/518 (12%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMI--AVYLKNKDVHGAETIFKAMSER----DVVAQSA 122
G +K+A+K+FDE + S+N+++ V K + F M E +V + S
Sbjct: 160 GSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSN 219
Query: 123 MVDGYAKAGRLDNAREV----FDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERS 178
+ +A A L + N + F TSL+ YF+CG+ A ++FD++ ER
Sbjct: 220 VFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERD 279
Query: 179 VVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTI--------------------------- 211
+V W M++G A N A F M + I
Sbjct: 280 IVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVH 339
Query: 212 --------------AWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRV 257
+ ++ Y G + G ++F +RN SW ++SG + R
Sbjct: 340 AHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRF 399
Query: 258 DEAIHLFETM------PDRNHVSWT----AMVSGLAQNKMVEVARKYFDIMPFKDMAAWS 307
D+A+ M PD ++ A + + Q K + +P +++ +
Sbjct: 400 DQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLP--NVSLVT 457
Query: 308 AMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRP 367
+++ Y + + LF+ + ++NV W +ID YV N + + +F LML S RP
Sbjct: 458 SLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRP 517
Query: 368 CVTTMTSIITSCDGMVEIM---QAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVF 424
TM ++T C + + + H ++ FE +V+ +I +Y K GDL SA F
Sbjct: 518 DSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSF 577
Query: 425 ELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVN 484
+ + K ++WTA+I AY + A+ F +MV+ G P+ TF +LS CS AG V+
Sbjct: 578 DAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVD 637
Query: 485 QGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEA 522
+ R F+ + YNL EHYS ++++L R G V EA
Sbjct: 638 EAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/471 (22%), Positives = 194/471 (41%), Gaps = 78/471 (16%)
Query: 93 IAVYLKNKDVHGAETIFKAMSERDVVAQ----SAMVDGYAKAGRLDNAREVF----DNMT 144
I ++ + ++ A TI + +R + SA+++ + L + ++V N
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 145 ERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDL 204
E N F T L+ Y CG ++A ++FD+ + +V +W ++ G +G +R+ D+
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISG----KKRYQDV 198
Query: 205 MPE----------------------------------------KNTI-----AWTAMVKS 219
+ KN + T++V
Sbjct: 199 LSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDM 258
Query: 220 YLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDR-----NHVS 274
Y G+ ++F E+ ER++ W MI+G R EA+ LF TM N V
Sbjct: 259 YFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVI 318
Query: 275 WTAMVSGLAQNKMVEVAR---------KYFDIMPFKDMAAWSAMITAYVDEKLLGEALEL 325
T ++ L K +++ + K + PF S +I Y + +
Sbjct: 319 LTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPF----VHSGLIDLYCKCGDMASGRRV 374
Query: 326 FNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI 385
F ++N W ++ GY NG +ALR + M + FRP V T+ +++ C + I
Sbjct: 375 FYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAI 434
Query: 386 MQA---HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAY 442
Q H + F N + +L+ +YSK G + +F+ L+ ++V +WTAMI Y
Sbjct: 435 KQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCY 494
Query: 443 ANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSI 493
+ ++VF M+ S +PD +T +L+ CS + G+ + I
Sbjct: 495 VENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHI 545
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/485 (26%), Positives = 230/485 (47%), Gaps = 42/485 (8%)
Query: 90 NSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTER--- 146
NS+I+ Y K + H AE +F+ D+V+ +A++ AK+ A ++F +M E
Sbjct: 254 NSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFS 313
Query: 147 -NAFSWTSLIS-----GYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARR 200
N ++ S++ CGR + L E +V ++ +A+ G ++ +R
Sbjct: 314 PNQGTYVSVLGVSSLVQLLSCGRQIHGM-LIKNGCETGIVLGNALIDFYAKCGNLEDSRL 372
Query: 201 FFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEA 260
FD + +KN + W A++ Y N LFL+M + R S L + V E
Sbjct: 373 CFDYIRDKNIVCWNALLSGY-ANKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTEL 431
Query: 261 IHLFETMP----DRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDE 316
L + + N ++++ A+N+++ A D W++ T+ V
Sbjct: 432 QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLD---------WASGPTSVVPL 482
Query: 317 KLLG----------EALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFR 366
++ E+++L + + + + WN I R+ E + LF ML+S R
Sbjct: 483 NIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIR 542
Query: 367 PCVTTMTSIITSCDGMVEIM---QAHAMVIHLGFE-QNTWVTNALITLYSKSGDLCSAML 422
P T SI++ C + ++ H ++ F +T+V N LI +Y K G + S M
Sbjct: 543 PDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMK 602
Query: 423 VFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGL 482
VFE + K++++WTA+I HG+G AL+ F ++ G KPD ++F+ +L+AC H G+
Sbjct: 603 VFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGM 662
Query: 483 VNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIP-PSEIDEAVLVA 541
V +G +F +K Y + +++HY C VD+L R G + EA ++ +P P+ D V
Sbjct: 663 VKEGMGLFQKMKD-YGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPA--DAPVWRT 719
Query: 542 LLGAC 546
L C
Sbjct: 720 FLDGC 724
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 133/580 (22%), Positives = 248/580 (42%), Gaps = 100/580 (17%)
Query: 62 ITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQS 121
I++ + G++ A K+FD+MP+R+ VS+N++I Y K DV A +F M +
Sbjct: 56 ISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQ 115
Query: 122 AMVDGYAKAGRLD-NAREVFDNMTER------NAFSWTSLISGYFRCGRTEEALQLFDQM 174
+ V G LD A ++ + +AF T L+ Y R E A Q+F+ M
Sbjct: 116 STVSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDM 175
Query: 175 SERSVVTWTTMVSGFAQNGLVDHARRFF----------------------------DLMP 206
+S+ TW M+S G + FF D+
Sbjct: 176 PFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISK 235
Query: 207 EKNTIAW-----------TAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSAN 255
+ + A +++ +Y G ++F + ++ SWN +I +
Sbjct: 236 QLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSE 295
Query: 256 RVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIMPFKD-----MAAW 306
+A+ LF +MP+ N ++ +++ + +++ R+ ++ K+ +
Sbjct: 296 NPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGML-IKNGCETGIVLG 354
Query: 307 SAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFR 366
+A+I Y L ++ F+ + +KN+ WN ++ GY N + L LF+ ML+ FR
Sbjct: 355 NALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFR 413
Query: 367 PCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFE- 425
P T ++ + SC + E+ Q H++++ +G+E N +V ++L+ Y+K+ + A+L+ +
Sbjct: 414 PTEYTFSTALKSC-CVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDW 472
Query: 426 -------------------------------LLKSKDVVSWTAMIVAYANHGHGHHALQV 454
L+ D VSW I A + + +++
Sbjct: 473 ASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIEL 532
Query: 455 FARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSI-KGAYNLNLKVEHYSC--LVD 511
F M+ S +PD+ TFV +LS CS + G + I K ++ + + C L+D
Sbjct: 533 FKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSC---ADTFVCNVLID 589
Query: 512 MLGRAGLVNEAMDVV-STIPPSEIDEAVLVALLGACKLHG 550
M G+ G + M V T + I L++ LG +HG
Sbjct: 590 MYGKCGSIRSVMKVFEETREKNLITWTALISCLG---IHG 626
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 186/403 (46%), Gaps = 25/403 (6%)
Query: 96 YLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLI 155
+ + K +H ++ + V + ++ Y K G + A +VFD M ERN S+ ++I
Sbjct: 28 FARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTII 87
Query: 156 SGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVD-------HARRFFDLMPEK 208
GY + G ++A +F +M + + VSG +D H +
Sbjct: 88 KGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMA 147
Query: 209 NTIAWTAMVKSY--LDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFET 266
+ T ++ Y LD + +E ++F +MP +++ +WN M+S + E + F
Sbjct: 148 DAFVGTCLLCLYGRLDLLEMAE--QVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRE 205
Query: 267 M----PDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFK----DMAAWSAMITAYVDEKL 318
+ S+ ++ G++ K ++++++ K +++ +++I+AY
Sbjct: 206 LVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGN 265
Query: 319 LGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITS 378
A +F ++ WN II ++ +AL+LF+ M F P T S++
Sbjct: 266 THMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVL-G 324
Query: 379 CDGMVEIM----QAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVS 434
+V+++ Q H M+I G E + NALI Y+K G+L + L F+ ++ K++V
Sbjct: 325 VSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVC 384
Query: 435 WTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSAC 477
W A++ YAN G L +F +M+ G +P E TF L +C
Sbjct: 385 WNALLSGYANK-DGPICLSLFLQMLQMGFRPTEYTFSTALKSC 426
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 132/286 (46%), Gaps = 14/286 (4%)
Query: 216 MVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSW 275
++ Y G+ S K+F +MPERN S+N +I G VD+A +F M ++
Sbjct: 55 IISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPN 114
Query: 276 TAMVSGL---------AQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELF 326
+ VSGL A ++ ++ KY M D + ++ Y LL A ++F
Sbjct: 115 QSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMA--DAFVGTCLLCLYGRLDLLEMAEQVF 172
Query: 327 NLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSII--TSCDGMVE 384
+P K++ WN ++ G E + F ++R ++ ++ SC ++
Sbjct: 173 EDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLD 232
Query: 385 I-MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYA 443
I Q H G + V N+LI+ Y K G+ A +F+ S D+VSW A+I A A
Sbjct: 233 ISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATA 292
Query: 444 NHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRV 489
+ AL++F M G P++ T+V +L S L++ GR++
Sbjct: 293 KSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQI 338
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 113/279 (40%), Gaps = 37/279 (13%)
Query: 52 DW-----SLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAE 106
DW S+ N+ I RRG+ E+ KL + Q D VS+N IA ++
Sbjct: 471 DWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVI 530
Query: 107 TIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFD--------------NMTERNAFSWT 152
+FK M + ++ D Y L ++ D + + + F
Sbjct: 531 ELFKHMLQSNIRP-----DKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCN 585
Query: 153 SLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVS-----GFAQNGLVDHARRFFDLMPE 207
LI Y +CG +++F++ E++++TWT ++S G+ Q L + + L +
Sbjct: 586 VLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEAL-EKFKETLSLGFK 644
Query: 208 KNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRS----WNVMISGCLSANRVDEAIHL 263
+ +++ +++ + G EG LF +M + V + + + EA HL
Sbjct: 645 PDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHL 704
Query: 264 FETMP-DRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFK 301
MP + W + G N+ E R +++ F+
Sbjct: 705 IREMPFPADAPVWRTFLDGC--NRFAEEQRNTLNVVSFQ 741
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 22/153 (14%)
Query: 389 HAMVIHLG--FEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHG 446
HA+ I L Q +V N +I+LY K G++ A VF+ + ++ VS+ +I Y+ +G
Sbjct: 35 HALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYG 94
Query: 447 HGHHALQVFARMVTSGTKPDEITFVGLLSACS---------HAGLVNQGRRVFDSIKGAY 497
A VF+ M G P++ T GLLS S H + G + D+ G
Sbjct: 95 DVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVG-- 152
Query: 498 NLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIP 530
+CL+ + GR L+ A V +P
Sbjct: 153 ---------TCLLCLYGRLDLLEMAEQVFEDMP 176
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 209/415 (50%), Gaps = 15/415 (3%)
Query: 209 NTIAWTAMVKSYLD-NGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM 267
N + + +V +Y N F +F MP RN+ SWN++I + ++I LF M
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 268 -------PDRNHVSWTA-MVSGLAQNKMVEVARKYFDIMPFKD-MAAWSAMITAYVDEKL 318
PD + S + K ++ + F + SA++ YVD
Sbjct: 125 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGK 184
Query: 319 LGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITS 378
L A +LF+ +P ++ ++ + GYV+ GEA L +F M S F M S++ +
Sbjct: 185 LLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMA 244
Query: 379 CDGMVEIMQA---HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSW 435
C + + H I + NA+ +Y K L A VF + +DV+SW
Sbjct: 245 CGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISW 304
Query: 436 TAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKG 495
+++I+ Y G + ++F M+ G +P+ +TF+G+LSAC+H GLV + F ++
Sbjct: 305 SSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQ- 363
Query: 496 AYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVA 555
YN+ +++HY+ + D + RAGL+ EA + +P DEAV+ A+L CK++GN++V
Sbjct: 364 EYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKP-DEAVMGAVLSGCKVYGNVEVG 422
Query: 556 NSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKISGFSQI 610
+ ++L+ L+P + YV L+ Y+A ++DE +R+ MKEK + K+ G S I
Sbjct: 423 ERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 95/231 (41%), Gaps = 48/231 (20%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQS------- 121
GKL ARKLFD+MP RD+V Y +M Y++ + +F+ M S
Sbjct: 183 GKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLL 242
Query: 122 --------------------------------AMVDGYAKAGRLDNAREVFDNMTERNAF 149
A+ D Y K LD A VF NM+ R+
Sbjct: 243 MACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVI 302
Query: 150 SWTSLISGYFRCGRTEEALQLFDQM----SERSVVTWTTMVSGFAQNGLVDHARRFFDLM 205
SW+SLI GY G + +LFD+M E + VT+ ++S A GLV+ + +F LM
Sbjct: 303 SWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLM 362
Query: 206 PEKNTIAWTAMVKSYLD----NGQFSEGYKLFLEMPERNVRS-WNVMISGC 251
E N + S D G E K +MP + + ++SGC
Sbjct: 363 QEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGC 413
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 121/289 (41%), Gaps = 59/289 (20%)
Query: 120 QSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSE--- 176
SA+V Y G+L +AR++FD+M R++ +T++ GY + G L +F +M
Sbjct: 172 SSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGF 231
Query: 177 -----------------------RSVVTWT-------------TMVSGFAQNGLVDHARR 200
+SV W + + + ++D+A
Sbjct: 232 ALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHT 291
Query: 201 FFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEM----PERNVRSWNVMISGCLSANR 256
F M ++ I+W++++ Y +G +KLF EM E N ++ ++S C
Sbjct: 292 VFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGL 351
Query: 257 VDEAIHLFETMPDRNHVS----WTAMVSGLAQNKMVEVARKYFDIMPFK-DMAAWSAMIT 311
V+++ F M + N V + ++ +++ ++E A K+ + MP K D A A+++
Sbjct: 352 VEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLS 411
Query: 312 AY-------VDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEA 353
V E++ A EL L P K + T+ Y G EA
Sbjct: 412 GCKVYGNVEVGERV---ARELIQLKPRK-ASYYVTLAGLYSAAGRFDEA 456
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 147/621 (23%), Positives = 280/621 (45%), Gaps = 71/621 (11%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIA------VYLKNKDVHGAETIFKAM 112
N I L + G L A + FDEM RD V+YN +I+ L+ +++ AE + +
Sbjct: 50 NRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELY-AEMVSCGL 108
Query: 113 SER----------------------------------DVVAQSAMVDGYAKAGRLDNARE 138
E ++ +SA+V YA +D A +
Sbjct: 109 RESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALK 168
Query: 139 VFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGL 194
+FD M +RN L+ + + G ++ +++ +M V +T+ M+ G + + L
Sbjct: 169 LFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRL 228
Query: 195 VDHARRFFDLMPEK-----NTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMIS 249
V ++ L+ + N +V Y G S + F +PE++V SWN ++S
Sbjct: 229 VYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVS 288
Query: 250 GCLSANRVDEAIHLFETM----------PDRNHVSWTAMVSGLAQNKMVE--VARKYFDI 297
C V +++ LF M P + +++ + S + K + V + FD+
Sbjct: 289 VCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDV 348
Query: 298 MPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLF 357
+ SA+I Y + + L+ +P N+ N+++ + G + + +F
Sbjct: 349 ---SSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMF 405
Query: 358 ILMLRSCFRPCVTTMTSIITSC-----DGMVEIMQAHAMVIHLGFEQNTWVTNALITLYS 412
LM+ T+++++ + + + H I G+ + V+ +LI Y+
Sbjct: 406 GLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYT 465
Query: 413 KSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVG 472
KSG + VF+ L + ++ T++I YA +G G +++ M PDE+T +
Sbjct: 466 KSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILS 525
Query: 473 LLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPS 532
+LS CSH+GLV +G +FDS++ Y ++ + Y+C+VD+LGRAGLV +A ++
Sbjct: 526 VLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQ-ARG 584
Query: 533 EIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQV 592
+ D +LL +C++H N + + L++LEP + Y+ +S Y ++ Q+
Sbjct: 585 DADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQI 644
Query: 593 RKRMKEKNVKKISGFSQIQVK 613
R+ + + + G+S + VK
Sbjct: 645 REIAASRELMREIGYSSVVVK 665
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 134/562 (23%), Positives = 245/562 (43%), Gaps = 91/562 (16%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKN---------------KDVH 103
N I G+ G + +AR+LF+EMP+RD S+N++I +N V
Sbjct: 100 NRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVR 159
Query: 104 GAETIFKAMSER------------------------DVVAQSAMVDGYAKAGRLDNAREV 139
ET F + + +V ++++VD Y K + +AR V
Sbjct: 160 ATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRV 219
Query: 140 FDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV-------------------- 179
FD + + SW ++ Y G +EA+ +F +M E +V
Sbjct: 220 FDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLAL 279
Query: 180 -------------------VTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSY 220
V T++ + + ++ ARR FD K+ +WT+ + Y
Sbjct: 280 EVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGY 339
Query: 221 LDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMP------DRNHVS 274
+G E +LF MPERN+ SWN M+ G + A+ DEA+ M D +
Sbjct: 340 AMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLV 399
Query: 275 WTAMV-SGLAQNKMVEVARKYFDIMPFK-DMAAWSAMITAYVDEKLLGEALELFNLVPE- 331
W V SG++ +M + A + + ++ +A++ Y L A F + E
Sbjct: 400 WILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSEL 459
Query: 332 KNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI---MQA 388
++ WN ++ G R G + +AL F M +P T+ +++ C + +
Sbjct: 460 RDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAI 518
Query: 389 HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHG 448
H +I G++ + + A++ +YSK A+ VF+ ++D++ W ++I +G
Sbjct: 519 HGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRS 578
Query: 449 HHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSC 508
++F + G KPD +TF+G+L AC G V G + F S+ Y+++ +VEHY C
Sbjct: 579 KEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDC 638
Query: 509 LVDMLGRAGLVNEAMDVVSTIP 530
++++ + G +++ + + +P
Sbjct: 639 MIELYCKYGCLHQLEEFLLLMP 660
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 3/192 (1%)
Query: 299 PFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFI 358
P + + I AY + +A ELF +PE++ G WN +I +NG + E R+F
Sbjct: 92 PLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFR 151
Query: 359 LMLRSCFRPCVTTMTSIITSCDGMVEIM---QAHAMVIHLGFEQNTWVTNALITLYSKSG 415
M R R T+ ++ SC ++++ Q H V+ G+ N + +++ +Y K
Sbjct: 152 RMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCR 211
Query: 416 DLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLS 475
+ A VF+ + + VSW ++ Y G A+ +F +M+ +P T ++
Sbjct: 212 VMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVML 271
Query: 476 ACSHAGLVNQGR 487
ACS + + G+
Sbjct: 272 ACSRSLALEVGK 283
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 13/174 (7%)
Query: 375 IITSCDGMVEIMQAHAMVIHL-GFEQ--NTWVTNALITLYSKSGDLCSAMLVFELLKSKD 431
+ SC ++QA + HL F ++ N I Y K G + A +FE + +D
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERD 126
Query: 432 VVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFD 491
SW A+I A A +G ++F RM G + E +F G+L +C GL+ R +
Sbjct: 127 GGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSC---GLILDLRLLRQ 183
Query: 492 ----SIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTI-PPSEIDEAVLV 540
+K Y+ N+ +E + +VD+ G+ ++++A V I PS++ V+V
Sbjct: 184 LHCAVVKYGYSGNVDLE--TSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIV 235
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 186/359 (51%), Gaps = 10/359 (2%)
Query: 288 VEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRN 347
+++A+K F +P +D+ +W+++I V + A +LF+ +P+KN+ WN +I Y+
Sbjct: 169 LDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGA 228
Query: 348 GEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQA---HAMVIHLGFEQNTWVT 404
G ++ LF M+R+ F+ +T+ ++ +C + + HA +I + +
Sbjct: 229 NNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVID 288
Query: 405 NALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTK 464
ALI +Y K ++ A +F+ L ++ V+W MI+A+ HG L++F M+ +
Sbjct: 289 TALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLR 348
Query: 465 PDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMD 524
PDE+TFVG+L C+ AGLV+QG+ + + + + H C+ ++ AG EA +
Sbjct: 349 PDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEE 408
Query: 525 VVSTIPPSEI--DEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAA 582
+ +P ++ + LL + + GN + SI + L+ +P + Y LL N Y+
Sbjct: 409 ALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSV 468
Query: 583 EEQWDEFAQVRKRMKEKNVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQ 641
+W++ +VR+ +KE+ + +I G + +K H +G + +V F + SL+
Sbjct: 469 TGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLRLGCKEAEKV-----FTETSLE 522
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 24/222 (10%)
Query: 153 SLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIA 212
SL+ Y CG + A +LF ++ +R +V+W ++++G +NG V A + FD MP+KN I+
Sbjct: 158 SLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIIS 217
Query: 213 WTAMVKSYLDNGQFSEGYKLFLEMP----ERNVRSWNVMISGCLSANRVDE--AIH--LF 264
W M+ +YL LF EM + N + ++++ C + R+ E ++H L
Sbjct: 218 WNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLI 277
Query: 265 ETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALE 324
T + + V TA++ + K V +AR+ FD + ++ W+ MI A+ L G
Sbjct: 278 RTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHC---LHGR--- 331
Query: 325 LFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFR 366
PE + ++ +I+G +R E F+ +L C R
Sbjct: 332 -----PEGGLELFEAMINGMLRPDEV-----TFVGVLCGCAR 363
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 127/280 (45%), Gaps = 27/280 (9%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYA 128
G L A+KLF E+P+RD VS+NS+IA ++N DV A +F M ++++++ + M+ Y
Sbjct: 167 GALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYL 226
Query: 129 KAGRLDNAREVFDNMT----ERNAFSWTSLISGYFRCGRTEEA----LQLFDQMSERSVV 180
A + +F M + N + L++ R R +E L SVV
Sbjct: 227 GANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVV 286
Query: 181 TWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERN 240
T ++ + + V ARR FD + +N + W M+ ++ +G+ G +LF M
Sbjct: 287 IDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGM 346
Query: 241 VRSWNV----MISGCLSANRVDEA-------IHLFETMPDRNHVSWTAMVSGLAQNKMVE 289
+R V ++ GC A V + + F+ P+ H W M + + E
Sbjct: 347 LRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGH-QW-CMANLYSSAGFPE 404
Query: 290 VARKYFDIMPFKDMAA----WSAMITA--YVDEKLLGEAL 323
A + +P +D+ W+ ++++ + LGE++
Sbjct: 405 EAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESI 444
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 103/239 (43%), Gaps = 50/239 (20%)
Query: 67 RRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAM-------------- 112
R G + A KLFDEMP ++ +S+N MI+ YL + + ++F+ M
Sbjct: 196 RNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVL 255
Query: 113 -------SER------------------DVVAQSAMVDGYAKAGRLDNAREVFDNMTERN 147
S R VV +A++D Y K + AR +FD+++ RN
Sbjct: 256 LLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRN 315
Query: 148 AFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHARRFFD 203
+W +I + GR E L+LF+ M + VT+ ++ G A+ GLV + ++
Sbjct: 316 KVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYS 375
Query: 204 LMPEKNTIA------WTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANR 256
LM ++ I W M Y G E + +P+ +V + + LS++R
Sbjct: 376 LMVDEFQIKPNFGHQW-CMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSR 433
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 104/227 (45%), Gaps = 24/227 (10%)
Query: 90 NSMIAVYLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAF 149
NS++ +Y + A+ +F + +RD+V+ ++++ G + G + A ++FD M ++N
Sbjct: 157 NSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNII 216
Query: 150 SWTSLISGYFRCGRTEEALQLFDQM-------SERSVVTWTTMV--SGFAQNGLVDHA-- 198
SW +IS Y ++ LF +M +E ++V S + G HA
Sbjct: 217 SWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASL 276
Query: 199 -RRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRV 257
R F + + + TA++ Y + ++F + RN +WNVMI R
Sbjct: 277 IRTFLN----SSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRP 332
Query: 258 DEAIHLFETM------PDRNHVSWTAMVSGLAQNKMVEVARKYFDIM 298
+ + LFE M PD V++ ++ G A+ +V + Y+ +M
Sbjct: 333 EGGLELFEAMINGMLRPD--EVTFVGVLCGCARAGLVSQGQSYYSLM 377
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 163/292 (55%), Gaps = 13/292 (4%)
Query: 322 ALELFNLVPEK-NVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCD 380
A ++F+ PEK N+ +W +I Y N + EA+ LF M +T +++C
Sbjct: 119 ARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACA 178
Query: 381 G-----MVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSW 435
M E + + ++ + + N+L+ +Y KSG+ A +F+ KDV ++
Sbjct: 179 DLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTY 238
Query: 436 TAMIVAYANHGHGHHALQVFARMVT------SGTKPDEITFVGLLSACSHAGLVNQGRRV 489
T+MI YA +G +L++F +M T + P+++TF+G+L ACSH+GLV +G+R
Sbjct: 239 TSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRH 298
Query: 490 FDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLH 549
F S+ YNL + H+ C+VD+ R+G + +A + ++ +P + + LLGAC LH
Sbjct: 299 FKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKP-NTVIWRTLLGACSLH 357
Query: 550 GNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNV 601
GN+++ + +++ L+ G YV LSN YA++ WDE +++R R++++ +
Sbjct: 358 GNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKRRM 409
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 126/277 (45%), Gaps = 33/277 (11%)
Query: 183 TTMVSGFAQNGLVDHARRFFDLMPEK-NTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNV 241
T++V ++ G VD+AR+ FD PEK N + WTAM+ +Y +N E +LF M +
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKI 163
Query: 242 RSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFK 301
V+++ LSA A+ + E + R+ + RK M
Sbjct: 164 ELDGVIVTVALSACADLGAVQMGEEIYSRS------------------IKRKRRLAM--- 202
Query: 302 DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILM- 360
D+ ++++ YV +A +LF+ K+V + ++I GY NG+A E+L LF M
Sbjct: 203 DLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMK 262
Query: 361 -----LRSCFRPCVTTMTSIITSC--DGMVEIMQAH--AMVIHLGFEQNTWVTNALITLY 411
+ P T ++ +C G+VE + H +M++ + ++ L+
Sbjct: 263 TIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLF 322
Query: 412 SKSGDLCSAM-LVFELLKSKDVVSWTAMIVAYANHGH 447
+SG L A + ++ + V W ++ A + HG+
Sbjct: 323 CRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGN 359
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 123/271 (45%), Gaps = 29/271 (10%)
Query: 120 QSAMVDGYAKAGRLDNAREVFDNMTER-NAFSWTSLISGYFRCGRTEEALQLFDQMSERS 178
Q+++V Y+ G +D AR+VFD E+ N WT++IS Y + EA++LF +M
Sbjct: 103 QTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEK 162
Query: 179 V----VTWTTMVSGFAQNGLVDHARRFFDL-MPEKNTIAW-----TAMVKSYLDNGQFSE 228
+ V T +S A G V + + K +A +++ Y+ +G+ +
Sbjct: 163 IELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEK 222
Query: 229 GYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMP----------DRNHVSWTAM 278
KLF E ++V ++ MI G + E++ LF+ M N V++ +
Sbjct: 223 ARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGV 282
Query: 279 VSGLAQNKMVEVARKYFD--IMPFK---DMAAWSAMITAYVDEKLLGEALELFNLVPEK- 332
+ + + +VE +++F IM + A + M+ + L +A E N +P K
Sbjct: 283 LMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKP 342
Query: 333 NVGIWNTIIDGYVRNG--EAGEALRLFILML 361
N IW T++ +G E GE ++ I L
Sbjct: 343 NTVIWRTLLGACSLHGNVELGEEVQRRIFEL 373
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 151/354 (42%), Gaps = 55/354 (15%)
Query: 69 GKLKEARKLFDEMPQR-DAVSYNSMIAVYLKNKDVHGAETIFKAMS----ERDVVAQSAM 123
G + AR++FDE P++ + V + +MI+ Y +N++ A +FK M E D V +
Sbjct: 114 GDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVA 173
Query: 124 VDGYAKAGRLDNAREVFDNMTERN---AFSWT---SLISGYFRCGRTEEALQLFDQMSER 177
+ A G + E++ +R A T SL++ Y + G TE+A +LFD+ +
Sbjct: 174 LSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRK 233
Query: 178 SVVTWTTMVSGFAQNGLVDHARRFF----------DLMPEKNTIAWTAMVKSYLDNGQFS 227
V T+T+M+ G+A NG + F D + N + + ++ + +G
Sbjct: 234 DVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVE 293
Query: 228 EGYKLFLEMP-ERNVRS----WNVMISGCLSANRVDEAIHLFETMPDR-NHVSWTAMVSG 281
EG + F M + N++ + M+ + + +A MP + N V W ++
Sbjct: 294 EGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGA 353
Query: 282 LAQNKMV----EVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNV--- 334
+ + V EV R+ F+ + + + A+ Y + + E ++ + V ++ +
Sbjct: 354 CSLHGNVELGEEVQRRIFE-LDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKRRMPGK 412
Query: 335 ------GIWNTIIDGYVRN------GEAGEALRLFILMLRSCFRPCVTTMTSII 376
I N + G N GE E LR C C+T+ +I
Sbjct: 413 SWIELGSIINEFVSGPDNNDEQLMMGEISEVLR--------CLVSCMTSFDCVI 458
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 23/200 (11%)
Query: 338 NTIIDGYVRNGEAGEALRLFILMLRSCFR--PCVTTMTSII-----------TSCDGMVE 384
N + Y+ +GE +AL L R FR P S++ +S DG
Sbjct: 32 NHTLKQYLESGEPIKAL----LDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGR-- 85
Query: 385 IMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVF-ELLKSKDVVSWTAMIVAYA 443
Q HA+V LGF + +L+ YS GD+ A VF E + +++V WTAMI AY
Sbjct: 86 --QIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYT 143
Query: 444 NHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFD-SIKGAYNLNLK 502
+ + A+++F RM + D + LSAC+ G V G ++ SIK L +
Sbjct: 144 ENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMD 203
Query: 503 VEHYSCLVDMLGRAGLVNEA 522
+ + L++M ++G +A
Sbjct: 204 LTLRNSLLNMYVKSGETEKA 223
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 94/211 (44%), Gaps = 27/211 (12%)
Query: 58 RNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDV 117
RN + + + G+ ++ARKLFDE ++D +Y SMI Y N + +FK M D
Sbjct: 207 RNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQ 266
Query: 118 VAQSAMV---------------DGYAKAGRLDNAREVFD-NMTERNAFSWTSLISGYFRC 161
+ + G + G+ + D N+ R A + ++ + R
Sbjct: 267 SQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREA-HFGCMVDLFCRS 325
Query: 162 GRTEEALQLFDQMS-ERSVVTWTTMVSGFAQNGLVDHA----RRFFDLMPEKNTIA-WTA 215
G ++A + +QM + + V W T++ + +G V+ RR F+L +++ + + A
Sbjct: 326 GHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFEL--DRDHVGDYVA 383
Query: 216 MVKSYLDNGQFSEGYKLFLEMPERNV--RSW 244
+ Y G + E K+ + +R + +SW
Sbjct: 384 LSNIYASKGMWDEKSKMRDRVRKRRMPGKSW 414
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/505 (25%), Positives = 232/505 (45%), Gaps = 37/505 (7%)
Query: 64 ILGRRGKLKEARKLF--DEMPQRDAVSYNS------MIAVYLKN-------KDVHGAETI 108
+ G+R F + + Q D+ S++S ++A +L++ K +H
Sbjct: 51 VSGKRASFDSGFSGFKGENVNQDDSSSFDSERVDYALLAEWLQSSNGMRLIKRIHA--MA 108
Query: 109 FKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEAL 168
K ++ + + ++ + G L AR+VFD+M E+N +WT++I GY + G +EA
Sbjct: 109 LKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAF 168
Query: 169 QLFDQ--------MSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSY 220
LF+ +ER V + S A+ L + N I +++V Y
Sbjct: 169 ALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFY 228
Query: 221 LDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWT 276
G+ + + F M E++V SW +IS C +AI +F M + N +
Sbjct: 229 AQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVC 288
Query: 277 AMVSGLAQNKMVEVARKYFDI----MPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEK 332
+++ ++ K + R+ + M D+ ++++ Y + + ++F+ + +
Sbjct: 289 SILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNR 348
Query: 333 NVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIM---QAH 389
N W +II + R G EA+ LF +M R T+ SI+ +C + ++ + H
Sbjct: 349 NTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELH 408
Query: 390 AMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGH 449
A +I E+N ++ + L+ LY K G+ A V + L S+DVVSWTAMI ++ GH
Sbjct: 409 AQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHES 468
Query: 450 HALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCL 509
AL M+ G +P+ T+ L AC+++ + GR + K + L+ V S L
Sbjct: 469 EALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALS-NVFVGSAL 527
Query: 510 VDMLGRAGLVNEAMDVVSTIPPSEI 534
+ M + G V+EA V ++P +
Sbjct: 528 IHMYAKCGFVSEAFRVFDSMPEKNL 552
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 120/479 (25%), Positives = 211/479 (44%), Gaps = 78/479 (16%)
Query: 67 RRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIF--------KAMSERDVV 118
R G L ARK+FD MP+++ V++ +MI YLK A +F + +ER V
Sbjct: 129 RLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFV 188
Query: 119 AQSAMVDGYAKAGRLDNAREVFDNMTE---RNAFSWTSLISGYFRCGRTEEALQLFDQMS 175
+++ ++ + R+V NM + N +SL+ Y +CG AL+ FD M
Sbjct: 189 C---LLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDMME 245
Query: 176 ERSVVTWTTMVSGFAQNG-----------LVDH--------------------ARRF--- 201
E+ V++WT ++S ++ G +++H A RF
Sbjct: 246 EKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQ 305
Query: 202 -----FDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANR 256
M + + T+++ Y G+ S+ K+F M RN +W +I+
Sbjct: 306 VHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGF 365
Query: 257 VDEAIHLFETMPDR----NHVSWTAMVSG--------LAQNKMVEVARKYFDIMPFKDMA 304
+EAI LF M R N+++ +++ L + ++ + + K++
Sbjct: 366 GEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIE----KNVY 421
Query: 305 AWSAMITAYVDEKLLGEALELFNLV---PEKNVGIWNTIIDGYVRNGEAGEALRLFILML 361
S ++ Y GE+ + FN++ P ++V W +I G G EAL M+
Sbjct: 422 IGSTLVWLYCK---CGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMI 478
Query: 362 RSCFRPCVTTMTSIITSCDGMVEIM---QAHAMVIHLGFEQNTWVTNALITLYSKSGDLC 418
+ P T +S + +C ++ H++ N +V +ALI +Y+K G +
Sbjct: 479 QEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVS 538
Query: 419 SAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSAC 477
A VF+ + K++VSW AMI+ YA +G AL++ RM G + D+ F +LS C
Sbjct: 539 EAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 173/378 (45%), Gaps = 62/378 (16%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAE---------------------T 107
G+L A + FD M ++D +S+ ++I+ ++ HG + +
Sbjct: 232 GELTSALRAFDMMEEKDVISWTAVISAC--SRKGHGIKAIGMFIGMLNHWFLPNEFTVCS 289
Query: 108 IFKAMSER--------------------DVVAQSAMVDGYAKAGRLDNAREVFDNMTERN 147
I KA SE DV ++++D YAK G + + R+VFD M+ RN
Sbjct: 290 ILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRN 349
Query: 148 AFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWT-TMVSGFAQNGLVD--------HA 198
+WTS+I+ + R G EEA+ LF M R ++ T+VS G V HA
Sbjct: 350 TVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHA 409
Query: 199 RRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVD 258
+ + + EKN + +V Y G+ + + + ++P R+V SW MISGC S
Sbjct: 410 QIIKNSI-EKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHES 468
Query: 259 EAIHLFETM----PDRNHVSWTAMVSGLAQNKMVEVARKYFDIM----PFKDMAAWSAMI 310
EA+ + M + N ++++ + A ++ + + R I ++ SA+I
Sbjct: 469 EALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALI 528
Query: 311 TAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVT 370
Y + EA +F+ +PEKN+ W +I GY RNG EAL+L M F
Sbjct: 529 HMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDY 588
Query: 371 TMTSIITSCDGMVEIMQA 388
+I+++C G +E+ +A
Sbjct: 589 IFATILSTC-GDIELDEA 605
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 86/187 (45%), Gaps = 7/187 (3%)
Query: 376 ITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSW 435
+ S +GM I + HAM + +Q + N LI+ + GDL A VF+ + K+ V+W
Sbjct: 92 LQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTW 151
Query: 436 TAMIVAYANHGHGHHALQVFARMVTSGTK-PDEITFVGLLSACSHAGLVNQGRRVFDSIK 494
TAMI Y +G A +F V G + +E FV LL+ CS GR+V ++
Sbjct: 152 TAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMV 211
Query: 495 GAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLVALLGAC--KLHGNI 552
NL VE S LV + G + A+ + E D A++ AC K HG
Sbjct: 212 KVGVGNLIVE--SSLVYFYAQCGELTSALRAFDMME--EKDVISWTAVISACSRKGHGIK 267
Query: 553 KVANSIG 559
+ IG
Sbjct: 268 AIGMFIG 274
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 180/389 (46%), Gaps = 44/389 (11%)
Query: 154 LISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLM-----PEK 208
LIS G T+ A +F+Q+ S TW M+ + N A F LM +
Sbjct: 58 LISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQF 117
Query: 209 NTIAWTAMVKSYLDNGQFSEGYKLF-LEMPE---RNVRSWNVMISGCLSANRVDEAIHLF 264
+ + ++K+ L + G ++ L + +V N ++ + D +F
Sbjct: 118 DKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVF 177
Query: 265 ETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALE 324
+ MP R+ VSWT M+ GL N ++ A F+ MP +++ +W+AMITAYV + EA +
Sbjct: 178 DKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQ 237
Query: 325 LFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVE 384
LF + +V +P T+ +++ + +
Sbjct: 238 LFRRMQVDDV-------------------------------KPNEFTIVNLLQASTQLGS 266
Query: 385 IMQA---HAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVA 441
+ H GF + ++ ALI +YSK G L A VF++++ K + +W +MI +
Sbjct: 267 LSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITS 326
Query: 442 YANHGHGHHALQVFARMVTSGT-KPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLN 500
HG G AL +F M + +PD ITFVG+LSAC++ G V G R F + Y ++
Sbjct: 327 LGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGIS 386
Query: 501 LKVEHYSCLVDMLGRAGLVNEAMDVVSTI 529
EH +C++ +L +A V +A ++V ++
Sbjct: 387 PIREHNACMIQLLEQALEVEKASNLVESM 415
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 115/229 (50%), Gaps = 13/229 (5%)
Query: 147 NAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMP 206
+ F +L+ YF+CG+ + ++FD+M RS+V+WTTM+ G N +D A F+ MP
Sbjct: 153 DVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMP 212
Query: 207 EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFET 266
+N ++WTAM+ +Y+ N + E ++LF M +V+ I L A+ ++ +
Sbjct: 213 MRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRW 272
Query: 267 MPDRNHVS--------WTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKL 318
+ D H + TA++ ++ ++ ARK FD+M K +A W++MIT+
Sbjct: 273 VHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGC 332
Query: 319 LGEALELFNLVP-----EKNVGIWNTIIDGYVRNGEAGEALRLFILMLR 362
EAL LF + E + + ++ G + LR F M++
Sbjct: 333 GEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQ 381
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 120/279 (43%), Gaps = 51/279 (18%)
Query: 325 LFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILML---RSCFRPCVTTMTSIITSCDG 381
+FN + + WN +I N + EAL LFILM+ +S F T +I +C
Sbjct: 74 VFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKF--TFPFVIKACLA 131
Query: 382 MVEI---MQAHAMVIHLGFEQNTWVTNALITLYSKSG----------------------- 415
I Q H + I GF + + N L+ LY K G
Sbjct: 132 SSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTM 191
Query: 416 --------DLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDE 467
L SA +VF + ++VVSWTAMI AY + A Q+F RM KP+E
Sbjct: 192 LYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNE 251
Query: 468 ITFVGLLSACSHAGLVNQGRRVFD-SIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVV 526
T V LL A + G ++ GR V D + K + L+ + + L+DM + G + +A V
Sbjct: 252 FTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLG--TALIDMYSKCGSLQDARKVF 309
Query: 527 STIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSL 565
+ + A +++ + +HG G++ LSL
Sbjct: 310 DVMQGKSL--ATWNSMITSLGVHG-------CGEEALSL 339
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 150/366 (40%), Gaps = 80/366 (21%)
Query: 53 WSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKD------VHGAE 106
W+L R++ + R L + Q D ++ +I L + VHG
Sbjct: 86 WNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLA 145
Query: 107 TIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEE 166
KA DV Q+ ++D Y K G+ D+ R+VFD M R+ SWT+++ G + +
Sbjct: 146 --IKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDS 203
Query: 167 ALQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFF------DLMPEKNTIA-------- 212
A +F+QM R+VV+WT M++ + +N D A + F D+ P + TI
Sbjct: 204 AEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQ 263
Query: 213 --------W-----------------TAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVM 247
W TA++ Y G + K+F M +++ +WN M
Sbjct: 264 LGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSM 323
Query: 248 ISGCLSANRVDEAIHLFETM-------PDRNHVSWTAMVSGLAQNKMVEVARKYFD---- 296
I+ +EA+ LFE M PD +++ ++S A V+ +YF
Sbjct: 324 ITSLGVHGCGEEALSLFEEMEEEASVEPDA--ITFVGVLSACANTGNVKDGLRYFTRMIQ 381
Query: 297 ---IMPFKDMAAWSAMITAYVDEKLLGEALEL---FNLV------PEKNVGIWNTIIDGY 344
I P ++ A MI +LL +ALE+ NLV P+ N N DG
Sbjct: 382 VYGISPIREHNA--CMI------QLLEQALEVEKASNLVESMDSDPDFNSSFGNEYTDGM 433
Query: 345 VRNGEA 350
E
Sbjct: 434 NETNET 439
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 124/301 (41%), Gaps = 55/301 (18%)
Query: 131 GRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQL-----------FDQMS---- 175
G A VF+ + + F+W +I + EAL L FD+ +
Sbjct: 66 GETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFV 125
Query: 176 -----ERSVVTWTTMVSGFA-----------QNGLV---------DHARRFFDLMPEKNT 210
S + T V G A QN L+ D R+ FD MP ++
Sbjct: 126 IKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSI 185
Query: 211 IAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM--- 267
++WT M+ + N Q +F +MP RNV SW MI+ + R DEA LF M
Sbjct: 186 VSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVD 245
Query: 268 ---PDR----NHVSWTAMVSGLAQNKMV-EVARKYFDIMPFKDMAAWSAMITAYVDEKLL 319
P+ N + + + L+ + V + A K ++ D +A+I Y L
Sbjct: 246 DVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVL---DCFLGTALIDMYSKCGSL 302
Query: 320 GEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLF-ILMLRSCFRPCVTTMTSIITS 378
+A ++F+++ K++ WN++I +G EAL LF + + P T ++++
Sbjct: 303 QDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSA 362
Query: 379 C 379
C
Sbjct: 363 C 363
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 100/233 (42%), Gaps = 15/233 (6%)
Query: 375 IITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVS 434
+ +C ++ Q H +I + + LI++ S G+ A LVF L+S +
Sbjct: 26 FLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFT 85
Query: 435 WTAMIVAYANHGHGHHALQVFARMVTS-GTKPDEITFVGLLSACSHAGLVNQGRRVFD-S 492
W MI + + + AL +F M+ S ++ D+ TF ++ AC + + G +V +
Sbjct: 86 WNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLA 145
Query: 493 IK-GAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDE--AVLVALLGACKLH 549
IK G +N V + L+D+ + G + V +P I +L L+ +L
Sbjct: 146 IKAGFFN---DVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLD 202
Query: 550 GNIKVANSIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVK 602
V N + + + + + AY + DE Q+ +RM+ +VK
Sbjct: 203 SAEIVFNQMPMR-------NVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVK 248
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 188/421 (44%), Gaps = 39/421 (9%)
Query: 47 ISISHDWSLRKRNVEITILGRRGKLKEARKLFDEM----PQRDAVSYNSMIAVYLKNKDV 102
+ + H L N + L GK EA L D+M Q +AV+Y ++ V K+
Sbjct: 185 VEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQT 244
Query: 103 HGAETIFKAMSER----DVVAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSL 154
A + + M ER D V S ++DG K G LDNA +F+ M + N ++ L
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNIL 304
Query: 155 ISGYFRCGRTEEALQLFDQMSER----SVVTWTTMVSGFAQNGLVDHARRFFDLMPEK-- 208
I G+ GR ++ +L M +R +VVT++ ++ F + G + A M +
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI 364
Query: 209 --NTIAWTAMVKSYLDNGQFSEGYKLFLEMPER----NVRSWNVMISGCLSANRVDEAIH 262
+TI +T+++ + + ++ M + N+R++N++I+G ANR+D+ +
Sbjct: 365 APDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLE 424
Query: 263 LFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIMPFK----DMAAWSAMITAYV 314
LF M R + V++ ++ G + + VA++ F M + ++ + ++
Sbjct: 425 LFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLC 484
Query: 315 DEKLLGEALELFNLVP----EKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVT 370
D +ALE+F + E ++GI+N II G + +A LF + +P V
Sbjct: 485 DNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVK 544
Query: 371 TMTSIITSCDGMVEIMQAHAMVIHL---GFEQNTWVTNALITLYSKSGDLCSAMLVFELL 427
T +I + +A + + G + W N LI + GD ++ + E L
Sbjct: 545 TYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604
Query: 428 K 428
K
Sbjct: 605 K 605
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 122/550 (22%), Positives = 232/550 (42%), Gaps = 81/550 (14%)
Query: 41 RNFTA--SISISHDWSLRKRNVEITILGRRGKLKEARKLFDEM----PQRDAVSYNSMIA 94
R F+A ++S+ LR V+I K +A LF +M P + ++ + +
Sbjct: 44 RGFSAFSDRNLSYRERLRSGLVDI-------KADDAIDLFRDMIHSRPLPTVIDFSRLFS 96
Query: 95 VYLKNKDVHGAETIFKAMSERDVVAQ----SAMVDGYAKAGRLDNAREVFDNMT----ER 146
K K + K M + + S M++ + + +L A + E
Sbjct: 97 AIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEP 156
Query: 147 NAFSWTSLISGYFRCGRTEEALQLFDQMSER----SVVTWTTMVSGFAQNGLVDHARRFF 202
N ++++LI+G GR EAL+L D+M E ++T T+V+G +G A
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216
Query: 203 DLMPE----KNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVR----SWNVMISGCLSA 254
D M E N + + ++ +GQ + +L +M ERN++ ++++I G
Sbjct: 217 DKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKH 276
Query: 255 NRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMI 310
+D A +LF M + N +++ ++ G F + W
Sbjct: 277 GSLDNAFNLFNEMEMKGITTNIITYNILIGG------------------FCNAGRWDD-- 316
Query: 311 TAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVT 370
KLL + ++ + P NV ++ +ID +V+ G+ EA L M+ P
Sbjct: 317 ----GAKLLRDMIKR-KINP--NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369
Query: 371 TMTSIITSCDGMVE---IMQAHAMV---IHLGFEQNTWVTNALITLYSKSGDLCSAMLVF 424
T TS+I DG + + +A+ MV + G + N N LI Y K+ + + +F
Sbjct: 370 TYTSLI---DGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 425 ELLKSK----DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHA 480
+ + D V++ +I + G + A ++F MV+ P+ +T+ LL
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Query: 481 GLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVL- 539
G + +F+ I+ + + L + Y+ ++ + A V++A D+ ++P + V
Sbjct: 487 GESEKALEIFEKIEKS-KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKT 545
Query: 540 --VALLGACK 547
+ + G CK
Sbjct: 546 YNIMIGGLCK 555
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 166/347 (47%), Gaps = 36/347 (10%)
Query: 47 ISISHDWSLRKRNVEITILGRRGKLKEARKLFDEMP----QRDAVSYNSMIAVYLKNKDV 102
+ + H +L N + L GK+ +A L D M Q + V+Y ++ V K+
Sbjct: 185 VEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQT 244
Query: 103 HGAETIFKAMSER----DVVAQSAMVDGYAKAGRLDNAREVFDNMT----ERNAFSWTSL 154
A + + M ER D V S ++DG K G LDNA +F+ M + + ++ +L
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 304
Query: 155 ISGYFRCGRTEEALQLFDQMSER----SVVTWTTMVSGFAQNGLVDHARRFFDLMPEK-- 208
I G+ GR ++ +L M +R +VVT++ ++ F + G + A + M ++
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364
Query: 209 --NTIAWTAMVKSYLDNGQFSEGYKLFLEMPER----NVRSWNVMISGCLSANRVDEAIH 262
NTI + +++ + + E ++ M + ++ ++N++I+G ANR+D+ +
Sbjct: 365 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLE 424
Query: 263 LFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIMPFK----DMAAWSAMITAYV 314
LF M R N V++ +V G Q+ +EVA+K F M + D+ ++ ++
Sbjct: 425 LFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLC 484
Query: 315 DEKLLGEALELFNLVP----EKNVGIWNTIIDGYVRNGEAGEALRLF 357
D L +ALE+F + E ++GI+ II G + +A LF
Sbjct: 485 DNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLF 531
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 103/478 (21%), Positives = 213/478 (44%), Gaps = 50/478 (10%)
Query: 43 FTASISISHDWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDV 102
+T SI I+ RK + + +G+ KL + D V +N+++ V
Sbjct: 124 YTLSIMINCFCRCRKLSYAFSTMGKIMKLGY---------EPDTVIFNTLLNGLCLECRV 174
Query: 103 HGAETIFKAMSER----DVVAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSL 154
A + M E ++ + +V+G G++ +A + D M E N ++ +
Sbjct: 175 SEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPV 234
Query: 155 ISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHARRFFDLMPEK-- 208
++ + G+T A++L +M ER++ V ++ ++ G ++G +D+A F+ M K
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 294
Query: 209 --NTIAWTAMVKSYLDNGQFSEGYKLFLEMPER----NVRSWNVMISGCLSANRVDEAIH 262
+ I + ++ + + G++ +G KL +M +R NV +++V+I + ++ EA
Sbjct: 295 KADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQ 354
Query: 263 LFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIMPFK----DMAAWSAMITAYV 314
L + M R N +++ +++ G + +E A + D+M K D+ ++ +I Y
Sbjct: 355 LLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC 414
Query: 315 DEKLLGEALELFNLVPEK----NVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVT 370
+ + LELF + + N +NT++ G+ ++G+ A +LF M+ RP +
Sbjct: 415 KANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIV 474
Query: 371 TMTSIITS-CDG--MVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELL 427
+ ++ CD + + ++ + E + + +I + + A +F L
Sbjct: 475 SYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSL 534
Query: 428 KSK----DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAG 481
K D ++ MI A +F +M G PDE+T+ L+ A H G
Sbjct: 535 PLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA--HLG 590
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 178/436 (40%), Gaps = 47/436 (10%)
Query: 233 FLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM----PDRNHVSWTAMVSGLAQNKMV 288
F +RN+ + + SG L + D+A+ LF M P + + + S +A+ K
Sbjct: 46 FSTFSDRNLSYRDKLSSG-LVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQY 104
Query: 289 EVARKYFDIMPFKDMA----AWSAMITAYVDEKLLGEAL----ELFNLVPEKNVGIWNTI 340
E+ M K +A S MI + + L A ++ L E + I+NT+
Sbjct: 105 ELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTL 164
Query: 341 IDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMV---IHLGF 397
++G EAL L M+ +P + T+ +++ ++ A ++ + GF
Sbjct: 165 LNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGF 224
Query: 398 EQNTWVTNALITLYSKSGDLCSAMLVFELLKSK----DVVSWTAMIVAYANHGHGHHALQ 453
+ N ++ + KSG AM + ++ + D V ++ +I G +A
Sbjct: 225 QPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFN 284
Query: 454 VFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVF-DSIKGAYNLNLKVEHYSCLVDM 512
+F M G K D IT+ L+ +AG + G ++ D IK + N V +S L+D
Sbjct: 285 LFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN--VVTFSVLIDS 342
Query: 513 LGRAGLVNEAMDVVST-----IPPSEIDEAVLVALLGACK---LHGNIKVANSIGQKLLS 564
+ G + EA ++ I P+ I L+ G CK L I++ + + K
Sbjct: 343 FVKEGKLREADQLLKEMMQRGIAPNTITYNSLID--GFCKENRLEEAIQMVDLMISK--G 398
Query: 565 LEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNV--------KKISGFSQ---IQVK 613
+P + +L N Y + D+ ++ + M + V + GF Q ++V
Sbjct: 399 CDPDIM-TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVA 457
Query: 614 GKNHLFFVGERSHPQV 629
K V R P +
Sbjct: 458 KKLFQEMVSRRVRPDI 473
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 108/536 (20%), Positives = 217/536 (40%), Gaps = 79/536 (14%)
Query: 99 NKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSL 154
N+ + E F S+R++ + + G + D+A ++F +M + + L
Sbjct: 36 NELLFCCERGFSTFSDRNLSYRDKLSSGLVGI-KADDAVDLFRDMIQSRPLPTVIDFNRL 94
Query: 155 ISGYFRCGRTEEALQLFDQMSER----SVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNT 210
S + + E L L QM + S+ T + M++ F + K +
Sbjct: 95 FSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCR--------------CRKLS 140
Query: 211 IAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDR 270
A++ M K GY E + +N +++G RV EA+ L + M +
Sbjct: 141 YAFSTMGKI------MKLGY-------EPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 271 NH----VSWTAMVSGLAQNKMVEVARKYFDIM---PFK-DMAAWSAMITAYVDEKLLGEA 322
H ++ +V+GL N V A D M F+ + + ++ A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 323 LELFNLVPEKNVGI----WNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITS 378
+EL + E+N+ + ++ IIDG ++G A LF M F+ + T ++I
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 379 -C-----DGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSA-MLVFELLK--- 428
C D ++++ +I N + LI + K G L A L+ E+++
Sbjct: 308 FCNAGRWDDGAKLLRD---MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364
Query: 429 SKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRR 488
+ + +++ ++I + A+Q+ M++ G PD +TF L++ A ++ G
Sbjct: 365 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLE 424
Query: 489 VFD--SIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVL---VALL 543
+F S++G Y+ LV ++G + A + + + ++ + L
Sbjct: 425 LFREMSLRGVIA---NTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLD 481
Query: 544 GAC---KLHGNIKVANSIGQKLLSLEPTSSGGYVL----LSNAYAAEEQWDEFAQV 592
G C +L +++ I + + L+ G Y++ + NA ++ WD F +
Sbjct: 482 GLCDNGELEKALEIFGKIEKSKMELDI---GIYMIIIHGMCNASKVDDAWDLFCSL 534
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/465 (23%), Positives = 201/465 (43%), Gaps = 55/465 (11%)
Query: 85 DAVSYNSMIAVYLKNKDVHGAETIFKAMS----ERDVVAQSAMVDGYAKAGRLDNAREVF 140
D +Y+ I + + + A + M E D+V S++++GY + R+ +A +
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 141 DNMTE----RNAFSWTSLISGYFRCGRTEEALQLFDQMSER----SVVTWTTMVSGFAQN 192
D M E + F++T+LI G F + EA+ L DQM +R +VT+ T+V+G +
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 193 GLVDHARRFFDLMP----EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVR----SW 244
G +D A M E + + + ++ + LF EM + +R ++
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 245 NVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLA-QNKMVEVARKYFDIMP 299
+ +IS + R +A L M +R N V+++A++ + K+VE A K +D M
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE-AEKLYDEMI 355
Query: 300 FK----DMAAWSAMITAYVDEKLLGEALELFNLVPEK----NVGIWNTIIDGYVRNGEAG 351
+ D+ +S++I + L EA +F L+ K NV ++T+I G+ +
Sbjct: 356 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVE 415
Query: 352 EALRLFILMLRSCFRPCVTTMTSII------TSCDGMVEIMQAHAMVIHLGFEQNTWVTN 405
E + LF M + T T++I CD + + ++ +G N N
Sbjct: 416 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ---MVSVGVHPNILTYN 472
Query: 406 ALITLYSKSGDLCSAMLVFELLK----SKDVVSWTAMIVAYANHGHGHHALQVFARMVTS 461
L+ K+G L AM+VFE L+ D+ ++ MI G ++F +
Sbjct: 473 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK 532
Query: 462 GTKPDEITFVGLLSACSHAGLVNQGRRVFDSIK--------GAYN 498
G P+ I + ++S G + + +K G YN
Sbjct: 533 GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYN 577
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 160/331 (48%), Gaps = 56/331 (16%)
Query: 62 ITILGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSER-- 115
I+ L G+ +A +L +M +R + V+++++I ++K + AE ++ M +R
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 116 --DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAF----SWTSLISGYFRCGRTEEALQ 169
D+ S++++G+ RLD A+ +F+ M ++ F ++++LI G+ + R EE ++
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 170 LFDQMSERSVV----TWTTMVSGFAQNGLVDHARRFFDLMPE----KNTIAWTAMVKSYL 221
LF +MS+R +V T+TT++ GF Q D+A+ F M N + + ++
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 222 DNGQFSEGYKLFLEMP----ERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTA 277
NG+ ++ +F + E ++ ++N+MI G A +V++ LF +
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS--------- 530
Query: 278 MVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLV----PEKN 333
+ G++ N + A++ MI+ + + EA L + P N
Sbjct: 531 -LKGVSPN-----------------VIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPN 572
Query: 334 VGIWNTIIDGYVRNGEAGEALRLFILMLRSC 364
G +NT+I +R+G+ EA I +RSC
Sbjct: 573 SGTYNTLIRARLRDGDR-EASAELIKEMRSC 602
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 162/386 (41%), Gaps = 54/386 (13%)
Query: 132 RLDNAREVFDNMTERNAFS----WTSLISGYFRCGRTEEALQLFDQMS----ERSVVTWT 183
++D+A ++F +M + F + L+S + + E + L +QM + T++
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 184 TMVSGFAQNGLVDHA----RRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPER 239
++ F + + A + L E + + ++++ Y + + S+ L +M E
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 240 NVR----SWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVA 291
+ ++ +I G N+ EA+ L + M R + V++ +V+GL + +++A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 292 RKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAG 351
M EK G+ E +V I+NTIIDG +
Sbjct: 243 LSLLKKM-----------------EK--GKI--------EADVVIYNTIIDGLCKYKHMD 275
Query: 352 EALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMV---IHLGFEQNTWVTNALI 408
+AL LF M RP V T +S+I+ A ++ I N +ALI
Sbjct: 276 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 335
Query: 409 TLYSKSGDLCSAMLVF-ELLK---SKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTK 464
+ K G L A ++ E++K D+ +++++I + H A +F M++
Sbjct: 336 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 395
Query: 465 PDEITFVGLLSACSHAGLVNQGRRVF 490
P+ +T+ L+ A V +G +F
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELF 421
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/476 (23%), Positives = 221/476 (46%), Gaps = 43/476 (9%)
Query: 62 ITILGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSER-- 115
I L + GKL +A +LFDEM +R D YN +I +LK KD A ++ + E
Sbjct: 191 INDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSS 250
Query: 116 ---DVVAQSAMVDGYAKAGRLDNAREVFDNMT----ERNAFSWTSLISGYFRCGRTEEAL 168
+V + M+ G +K GR+D+ ++++ M E++ ++++SLI G G ++A
Sbjct: 251 VYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAE 310
Query: 169 QLFDQMSER----SVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNT---IAWTAMVKSYL 221
+F+++ ER VVT+ TM+ GF + G + + + +M KN+ +++ ++K L
Sbjct: 311 SVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLL 370
Query: 222 DNGQFSEGYKLFLEMPER----NVRSWNVMISGCLSANRVDEAIHLF-ETMPDRNHV--- 273
+NG+ E ++ MP + + ++ + I G V++A+ + E H+
Sbjct: 371 ENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVY 430
Query: 274 SWTAMVSGLAQNKMVEVARKYFDIMPFKDMA----AWSAMITAYVDEKLLGEA----LEL 325
++ +++ L + K +E A M + +A+I + + LGEA E+
Sbjct: 431 AYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREM 490
Query: 326 FNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITS-C-DGMV 383
V +N +I G + G+ GEA ML + ++P + T + ++ C D +
Sbjct: 491 GKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKI 550
Query: 384 EI-MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSK----DVVSWTAM 438
++ ++ + G E + + N LI G L AM V ++ + ++V++ +
Sbjct: 551 DLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTL 610
Query: 439 IVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIK 494
+ + G + A ++ M G +PD I++ ++ V+ FD +
Sbjct: 611 MEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDAR 666
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 74/161 (45%), Gaps = 16/161 (9%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGA----ETIFK 110
N+ I L + GK EA EM + D +Y+ ++ +++ + A +
Sbjct: 503 NILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQ 562
Query: 111 AMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNA----FSWTSLISGYFRCGRTEE 166
+ E DV+ + ++ G G+LD+A V NM RN ++ +L+ G+F+ G +
Sbjct: 563 SGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNR 622
Query: 167 ALQLFDQMS----ERSVVTWTTMVSGFAQNGLVDHARRFFD 203
A ++ M + ++++ T++ G V +A FFD
Sbjct: 623 ATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFD 663
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/473 (24%), Positives = 222/473 (46%), Gaps = 60/473 (12%)
Query: 59 NVEITILGRRGKLKEARKLFDEMP----QRDAVSYNSMIAVYLKNKDVHGAETIFKAMSE 114
N IT R +EA ++F+EM D V+YN+++ VY K+ H + K ++E
Sbjct: 283 NTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKS---HRPKEAMKVLNE 339
Query: 115 -------RDVVAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGR 163
+V ++++ YA+ G LD A E+ + M E+ + F++T+L+SG+ R G+
Sbjct: 340 MVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGK 399
Query: 164 TEEALQLFDQM----SERSVVTWTTMVSGFAQNGLVDHARRFFD------LMPEKNTIAW 213
E A+ +F++M + ++ T+ + + G + FD L P+ + W
Sbjct: 400 VESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPD--IVTW 457
Query: 214 TAMVKSYLDNGQFSEGYKLFLEM------PERNVRSWNVMISGCLSANRVDEAIHLFETM 267
++ + NG SE +F EM PER ++N +IS ++A+ ++ M
Sbjct: 458 NTLLAVFGQNGMDSEVSGVFKEMKRAGFVPER--ETFNTLISAYSRCGSFEQAMTVYRRM 515
Query: 268 PD----RNHVSWTAMVSGLAQNKMVEVARKYFDIMP----FKDMAAWSAMITAYVDEKLL 319
D + ++ +++ LA+ M E + K M + + +++ AY + K +
Sbjct: 516 LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEI 575
Query: 320 GE----ALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSI 375
G A E+++ V E + T++ + EA R F + F P +TT+ S+
Sbjct: 576 GLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSM 635
Query: 376 ITSCDGMVEIMQAHAMVIHL---GFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSK-- 430
++ + +A+ ++ ++ GF + N+L+ ++S+S D + + + +K
Sbjct: 636 VSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGI 695
Query: 431 --DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEI---TFVGLLSACS 478
D++S+ +I AY + A ++F+ M SG PD I TF+G +A S
Sbjct: 696 KPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADS 748
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 131/596 (21%), Positives = 245/596 (41%), Gaps = 120/596 (20%)
Query: 96 YLKNKDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSW 151
++K KD +++M + VVA ++ K GR+ +A +F+ + E + +S+
Sbjct: 161 FMKQKD-------YQSMLDNSVVA--IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSY 211
Query: 152 TSLISGYFRCGRTEEALQLFDQMSE----RSVVTWTTMVSGFAQNGLVDHARRFFDLMPE 207
TSLIS + GR EA+ +F +M E +++T+ +++ F + G
Sbjct: 212 TSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMG-------------- 257
Query: 208 KNTIAW---TAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLF 264
W T++V+ +G + Y ++N +I+ C + EA +F
Sbjct: 258 ---TPWNKITSLVEKMKSDGIAPDAY------------TYNTLITCCKRGSLHQEAAQVF 302
Query: 265 ETMP----DRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFK----DMAAWSAMITAYVDE 316
E M + V++ A++ ++ + A K + M + ++++I+AY +
Sbjct: 303 EEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARD 362
Query: 317 KLLGEALELFNLVPEK----NVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTM 372
+L EA+EL N + EK +V + T++ G+ R G+ A+ +F M + +P + T
Sbjct: 363 GMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTF 422
Query: 373 TSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLK---- 428
NA I +Y G M +F+ +
Sbjct: 423 --------------------------------NAFIKMYGNRGKFTEMMKIFDEINVCGL 450
Query: 429 SKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRR 488
S D+V+W ++ + +G VF M +G P+ TF L+SA S G Q
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT 510
Query: 489 VFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEI--DEAVLVALLGAC 546
V+ + A + + Y+ ++ L R G+ ++ V++ + +E +LL A
Sbjct: 511 VYRRMLDA-GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY 569
Query: 547 KLHGNIKVANSIGQKLLS--LEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVKKI 604
I + +S+ +++ S +EP + VLL + D + + E K
Sbjct: 570 ANGKEIGLMHSLAEEVYSGVIEPRA----VLLKTLVLVCSKCDLLPEAERAFSE---LKE 622
Query: 605 SGFSQIQVKGKNHLFFVGERSHPQVEEIYGFLQQSLQPLMRETGYTPE----NSLL 656
GFS + + G R V + G L M+E G+TP NSL+
Sbjct: 623 RGFSPDITTLNSMVSIYGRRQ--MVAKANGVLD-----YMKERGFTPSMATYNSLM 671
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/488 (22%), Positives = 220/488 (45%), Gaps = 54/488 (11%)
Query: 85 DAVSYNSMIAVYLKNKDVHGAETIFKAMS----ERDVVAQSAMVDGYAKAGRLDNAREVF 140
DA +YN++I + A +F+ M D V +A++D Y K+ R A +V
Sbjct: 278 DAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVL 337
Query: 141 DNMTERNAFS-----WTSLISGYFRCGRTEEALQLFDQMSER----SVVTWTTMVSGFAQ 191
+ M N FS + SLIS Y R G +EA++L +QM+E+ V T+TT++SGF +
Sbjct: 338 NEMV-LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFER 396
Query: 192 NGLVDHARRFFDLMP----EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMP----ERNVRS 243
G V+ A F+ M + N + A +K Y + G+F+E K+F E+ ++ +
Sbjct: 397 AGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVT 456
Query: 244 WNVMISGCLSANRVDEAIH-LFETM------PDRNHVSWTAMVSGLAQ----NKMVEVAR 292
WN +++ N +D + +F+ M P+R ++ ++S ++ + + V R
Sbjct: 457 WNTLLA-VFGQNGMDSEVSGVFKEMKRAGFVPERE--TFNTLISAYSRCGSFEQAMTVYR 513
Query: 293 KYFDIMPFKDMAAWSAMITAYV-------DEKLLGEALELFNLVPEKNVGIWNTIIDGYV 345
+ D D++ ++ ++ A EK+L E +E P N + +++ Y
Sbjct: 514 RMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAE-MEDGRCKP--NELTYCSLLHAYA 570
Query: 346 RNGEAGEALRLFILMLRSCFRP---CVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTW 402
E G L + P + T+ + + CD + E +A + + GF +
Sbjct: 571 NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDIT 630
Query: 403 VTNALITLYSKSGDLCSAMLVFELLKSK----DVVSWTAMIVAYANHGHGHHALQVFARM 458
N+++++Y + + A V + +K + + ++ +++ ++ + ++ +
Sbjct: 631 TLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREI 690
Query: 459 VTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGL 518
+ G KPD I++ ++ A + R+F ++ + + V Y+ + +
Sbjct: 691 LAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNS-GIVPDVITYNTFIGSYAADSM 749
Query: 519 VNEAMDVV 526
EA+ VV
Sbjct: 750 FEEAIGVV 757
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 100/523 (19%), Positives = 224/523 (42%), Gaps = 77/523 (14%)
Query: 52 DWSLRKRNVE-----------ITILGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVY 96
DW +++++ + I++LG+ G++ A +F+ + + D SY S+I+ +
Sbjct: 159 DWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAF 218
Query: 97 LKNKDVHGAETIFKAMSE----RDVVAQSAMVDGYAKAGRLDN-----AREVFDNMTERN 147
+ A +FK M E ++ + +++ + K G N ++ + +
Sbjct: 219 ANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPD 278
Query: 148 AFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHARRFFD 203
A+++ +LI+ R +EA Q+F++M VT+ ++ + ++ A + +
Sbjct: 279 AYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLN 338
Query: 204 LMP----EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPER----NVRSWNVMISGCLSAN 255
M + + + +++ +Y +G E +L +M E+ +V ++ ++SG A
Sbjct: 339 EMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAG 398
Query: 256 RVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVD 315
+V+ A+ +FE M RN +G N + ++A I Y +
Sbjct: 399 KVESAMSIFEEM--RN--------AGCKPN-----------------ICTFNAFIKMYGN 431
Query: 316 EKLLGEALELFNLVP----EKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTT 371
E +++F+ + ++ WNT++ + +NG E +F M R+ F P T
Sbjct: 432 RGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERET 491
Query: 372 MTSIITS---CDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLK 428
++I++ C + M + ++ G + N ++ ++ G + V ++
Sbjct: 492 FNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEME 551
Query: 429 S----KDVVSWTAMIVAYANHGHGHHALQVFARMVTSGT-KPDEITFVGLLSACSHAGLV 483
+ +++ +++ AYAN G + A V SG +P + L+ CS L+
Sbjct: 552 DGRCKPNELTYCSLLHAYAN-GKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLL 610
Query: 484 NQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVV 526
+ R F +K + + + +V + GR +V +A V+
Sbjct: 611 PEAERAFSELK-ERGFSPDITTLNSMVSIYGRRQMVAKANGVL 652
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 154/362 (42%), Gaps = 33/362 (9%)
Query: 215 AMVKSYLDNGQF----SEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFE-TMPD 269
++++ D+GQ SE ++ F + PE + G + D A+ F+ M
Sbjct: 105 SLIEPNFDSGQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQ 164
Query: 270 RNHVSW------TAMVSGLAQNKMVEVARKYFDIMPFK----DMAAWSAMITAYVDEKLL 319
+++ S ++S L + V A F+ + D+ +++++I+A+ +
Sbjct: 165 KDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRY 224
Query: 320 GEALELFNLVPEKNVG----IWNTIIDGYVRNGEAGEALRLFILMLRS-CFRPCVTTMTS 374
EA+ +F + E +N I++ + + G + + ++S P T +
Sbjct: 225 REAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNT 284
Query: 375 IITSCD-GMV--EIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLK--- 428
+IT C G + E Q + GF + NAL+ +Y KS AM V +
Sbjct: 285 LITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNG 344
Query: 429 -SKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGR 487
S +V++ ++I AYA G A+++ +M GTKPD T+ LLS AG V
Sbjct: 345 FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAM 404
Query: 488 RVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDV-----VSTIPPSEIDEAVLVAL 542
+F+ ++ A + ++ + M G G E M + V + P + L+A+
Sbjct: 405 SIFEEMRNA-GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAV 463
Query: 543 LG 544
G
Sbjct: 464 FG 465
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 149/383 (38%), Gaps = 94/383 (24%)
Query: 59 NVEITILGRRGKLKEARKLFDEMP----QRDAVSYNSMIAVYLKNKDVHGAETIFKAMSE 114
N I + G RGK E K+FDE+ D V++N+++AV+ +N +FK M
Sbjct: 423 NAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 482
Query: 115 RDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQM 174
V + RE F+ +LIS Y RCG E+A+ ++ +M
Sbjct: 483 AGFVPE----------------RETFN-----------TLISAYSRCGSFEQAMTVYRRM 515
Query: 175 SERSVV----TWTTMVSGFAQNGLVDHARRFFDLMPE----KNTIAWTAMVKSYLDNGQF 226
+ V T+ T+++ A+ G+ + + + M + N + + +++ +Y + +
Sbjct: 516 LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEI 575
Query: 227 SEGYKLFLEMPERNVRSWNVMISG----CLSANRVDEAIHLFETMPDRNH----VSWTAM 278
+ L E+ + V++ C + + EA F + +R + +M
Sbjct: 576 GLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSM 635
Query: 279 VSGLAQNKMVEVARKYFDIMPFK------------------------------------- 301
VS + +MV A D M +
Sbjct: 636 VSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGI 695
Query: 302 --DMAAWSAMITAYVDEKLLGEALELFN------LVPEKNVGIWNTIIDGYVRNGEAGEA 353
D+ +++ +I AY + +A +F+ +VP+ V +NT I Y + EA
Sbjct: 696 KPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPD--VITYNTFIGSYAADSMFEEA 753
Query: 354 LRLFILMLRSCFRPCVTTMTSII 376
+ + M++ RP T SI+
Sbjct: 754 IGVVRYMIKHGCRPNQNTYNSIV 776
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 198/450 (44%), Gaps = 47/450 (10%)
Query: 88 SYNSMIAVYLKNKDVHGAETIFKAM----SERDVVAQSAMVDGYAKAGRLDNAREVFDNM 143
+YN +I + + + A + M E +V S++++GY R+ +A + D M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 144 TE----RNAFSWTSLISGYFRCGRTEEALQLFDQMSER----SVVTWTTMVSGFAQNGLV 195
E + ++T+LI G F + EA+ L D+M +R ++VT+ +V+G + G +
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 196 DHARRFFDLMP----EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVR----SWNVM 247
D A + M E N + ++ ++ S + LF EM + VR +++ +
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 248 ISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLA-QNKMVEVARKYFDIMPFK- 301
IS + R +A L M +R N V++ A++ + K+VE A K +D M +
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVE-AEKLYDEMIKRS 360
Query: 302 ---DMAAWSAMITAYVDEKLLGEALELFNLVPEK----NVGIWNTIIDGYVRNGEAGEAL 354
D+ +S++I + L EA +F L+ K NV +NT+I+G+ + E +
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420
Query: 355 RLFILMLRSCFRPCVTTMTSII------TSCDGMVEIMQAHAMVIHLGFEQNTWVTNALI 408
LF M + T T++I CD + + ++ G N N L+
Sbjct: 421 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ---MVSDGVHPNIMTYNTLL 477
Query: 409 TLYSKSGDLCSAMLVFELLK----SKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTK 464
K+G L AM+VFE L+ + ++ MI G +F + G K
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
Query: 465 PDEITFVGLLSACSHAGLVNQGRRVFDSIK 494
PD I + ++S GL + +F ++
Sbjct: 538 PDVIIYNTMISGFCRKGLKEEADALFRKMR 567
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 180/429 (41%), Gaps = 85/429 (19%)
Query: 70 KLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMS----ERDVVAQS 121
K EA L D M QR + V+Y ++ K D+ A + M E +VV S
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYS 264
Query: 122 AMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQLFDQMSER 177
++D K D+A +F M + N +++SLIS R +A +L M ER
Sbjct: 265 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER 324
Query: 178 ----SVVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFSEG 229
+VVT+ ++ F + G + A + +D M ++ + +++++ + + + E
Sbjct: 325 KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 384
Query: 230 YKLFLEMPER----NVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSG 281
+F M + NV ++N +I+G A R+DE + LF M R N V++T ++ G
Sbjct: 385 KHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHG 444
Query: 282 LAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTII 341
Q + + A+ M FK M + N+ +NT++
Sbjct: 445 FFQARDCDNAQ-----MVFKQMVSDGV----------------------HPNIMTYNTLL 477
Query: 342 DGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNT 401
DG +NG+ +A+ +F + RS P + T +I +GM + G ++
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI---EGMCKA----------GKVEDG 524
Query: 402 WVTNALITLYSKSGDL-CSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVT 460
W DL CS L + +K DV+ + MI + G A +F +M
Sbjct: 525 W-------------DLFCS--LSLKGVKP-DVIIYNTMISGFCRKGLKEEADALFRKMRE 568
Query: 461 SGTKPDEIT 469
G PD T
Sbjct: 569 DGPLPDSGT 577
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 116/233 (49%), Gaps = 24/233 (10%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSE 114
N I + GKL EA KL+DEM +R D +Y+S+I + + + A+ +F+ M
Sbjct: 334 NALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 393
Query: 115 RD----VVAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEE 166
+D VV + +++G+ KA R+D E+F M++R N ++T+LI G+F+ +
Sbjct: 394 KDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 453
Query: 167 ALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHARRFFDLMP----EKNTIAWTAMVK 218
A +F QM V +T+ T++ G +NG ++ A F+ + E + M++
Sbjct: 454 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 513
Query: 219 SYLDNGQFSEGYKLFLEMPERNVRS----WNVMISGCLSANRVDEAIHLFETM 267
G+ +G+ LF + + V+ +N MISG +EA LF M
Sbjct: 514 GMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/482 (23%), Positives = 210/482 (43%), Gaps = 58/482 (12%)
Query: 65 LGRRGKLKEARKLFDEM----PQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSER----D 116
+ GK + ++ F +M + +YN MI K DV A +F+ M R D
Sbjct: 237 FAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPD 296
Query: 117 VVAQSAMVDGYAKAGRLDNAREVFDNM----TERNAFSWTSLISGYFRCGRTEEALQLFD 172
V ++M+DG+ K GRLD+ F+ M E + ++ +LI+ + + G+ L+ +
Sbjct: 297 TVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYR 356
Query: 173 QMS----ERSVVTWTTMVSGFAQNGLVDHARRFF------DLMPEKNTIAWTAMVKSYLD 222
+M + +VV+++T+V F + G++ A +F+ L+P N +T+++ +
Sbjct: 357 EMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVP--NEYTYTSLIDANCK 414
Query: 223 NGQFSEGYKLFLEM----PERNVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVS 274
G S+ ++L EM E NV ++ +I G A R+ EA LF M N S
Sbjct: 415 IGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS 474
Query: 275 WTAMVSGLAQNKMVEVARKYFD------IMPFKDMAAWSAMITAYVDEKLLGEALELFNL 328
+ A++ G + K ++ A + + I P D+ + I + + A + N
Sbjct: 475 YNALIHGFVKAKNMDRALELLNELKGRGIKP--DLLLYGTFIWGLCSLEKIEAAKVVMNE 532
Query: 329 VPE----KNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVE 384
+ E N I+ T++D Y ++G E L L M V T +I DG+ +
Sbjct: 533 MKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLI---DGLCK 589
Query: 385 IMQAHAMVIH-------LGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVV---- 433
V + G + N + A+I K + +A +FE + K +V
Sbjct: 590 NKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRT 649
Query: 434 SWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSI 493
++T+++ G+ AL + +M G K D + + L+ SH + + R + +
Sbjct: 650 AYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 709
Query: 494 KG 495
G
Sbjct: 710 IG 711
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 130/281 (46%), Gaps = 29/281 (10%)
Query: 47 ISISHDWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAV----SYNSMIAVYLKNKDV 102
+ + +W++ I L ++KEA +LF +M + SYN++I ++K K++
Sbjct: 429 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 488
Query: 103 HGAETIFKAMSER----DVVAQSAMVDGYAKAGRLDNAREVFDNMTE----RNAFSWTSL 154
A + + R D++ + G +++ A+ V + M E N+ +T+L
Sbjct: 489 DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 548
Query: 155 ISGYFRCGRTEEALQLFDQMSER----SVVTWTTMVSGFAQNGLVDHARRFF-----DLM 205
+ YF+ G E L L D+M E +VVT+ ++ G +N LV A +F D
Sbjct: 549 MDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG 608
Query: 206 PEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNV----RSWNVMISGCLSANRVDEAI 261
+ N +TAM+ + Q LF +M ++ + ++ ++ G V EA+
Sbjct: 609 LQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEAL 668
Query: 262 HLFETMPD----RNHVSWTAMVSGLAQNKMVEVARKYFDIM 298
L + M + + +++T++V GL+ ++ AR + + M
Sbjct: 669 ALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 709
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 101/230 (43%), Gaps = 12/230 (5%)
Query: 304 AAWSAMITAYVDEKLLGEALELFNLVPEKNV----GIWNTIIDGYVRNGEAGEALRLFIL 359
+ A+ + +D +L EA++ F+ + V N ++ + + G+ + R F
Sbjct: 193 GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 252
Query: 360 MLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFE---QNTWVTNALITLYSKSGD 416
M+ + RP V T +I ++ A + + F +T N++I + K G
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 417 LCSAMLVFELLKS----KDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVG 472
L + FE +K DV+++ A+I + G L+ + M +G KP+ +++
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 473 LLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEA 522
L+ A G++ Q + + ++ L Y+ L+D + G +++A
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRV-GLVPNEYTYTSLIDANCKIGNLSDA 421
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 128/551 (23%), Positives = 229/551 (41%), Gaps = 100/551 (18%)
Query: 87 VSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQS----AMVDGYAKAGRLDNAREVFDN 142
+ Y +++ KN AE + + V S +++ G+ + L +A +VFD
Sbjct: 196 IDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDV 255
Query: 143 MTER-----NAFSWTSLISGYFRCGRTEEALQLFDQMSER----SVVTWTTMVSGFAQNG 193
M++ N+ S++ LI G GR EEA L DQM E+ S T+T ++ G
Sbjct: 256 MSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRG 315
Query: 194 LVDHARRFFDLM------PEKNT---------------------------------IAWT 214
L+D A FD M P +T I +
Sbjct: 316 LIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYN 375
Query: 215 AMVKSYLDNGQFSEGYKLFLEMPER----NVRSWNVMISGCLSANRVDEAIHLFETMPDR 270
A++ Y +G+ ++L M +R NVR++N ++ G + +A+HL + M D
Sbjct: 376 ALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN 435
Query: 271 ----NHVSWTAMVSGLAQNKMVEVARKY------FDIMPFKDMAAWSAMITAYVDEKLLG 320
+ VS+ ++ GL + + A K FDI P D ++A+I A+ +
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEP--DCLTFTAIINAFCKQGKAD 493
Query: 321 EALELFNLVPEKNVGI----WNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSII 376
A L+ K + + T+IDG + G+ +AL + +++ ++ I+
Sbjct: 494 VASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVIL 553
Query: 377 TSCDGMVEIMQAHAM---VIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSK--- 430
++ + AM + LG + L+ +SGD+ + + EL+K
Sbjct: 554 DMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCL 613
Query: 431 -DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGR-- 487
+V +T +I G A ++ + M SG P+ +T+ ++ G VN G+
Sbjct: 614 PNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVK-----GYVNNGKLD 668
Query: 488 RVFDSIKG----AYNLNLKVEHYSCLVD--MLGRAGLVNEAMDVVSTIP-----PSEIDE 536
R ++++ Y LN ++ YS L+ +L + G+ N VS I P I+E
Sbjct: 669 RALETVRAMVERGYELNDRI--YSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINE 726
Query: 537 AV-LVALLGAC 546
+ +V LG C
Sbjct: 727 LISVVEQLGGC 737
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 102/505 (20%), Positives = 198/505 (39%), Gaps = 88/505 (17%)
Query: 59 NVEITILGRRGKLKEA----RKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSE 114
V I L R GK++EA RK+ + ++YN++I Y K+ V A + M +
Sbjct: 340 TVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEK 399
Query: 115 R----DVVAQSAMVDGYAKAGRLDNA----REVFDNMTERNAFSWTSLISGYFRCGRTEE 166
R +V + +++G + G+ A + + DN + S+ LI G R G
Sbjct: 400 RACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNT 459
Query: 167 ALQLFDQMS----ERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVK 218
A +L M+ E +T+T +++ F + G D A F LM K + + T ++
Sbjct: 460 AYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLID 519
Query: 219 SYLDNGQ-----------------------------FSEGYKLFLEMPE----------R 239
G+ S+G K+ E+
Sbjct: 520 GVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVP 579
Query: 240 NVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYF 295
+V ++ ++ G + + + + + E M N +T +++GL Q VE A K
Sbjct: 580 SVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLL 639
Query: 296 DIMPFKDMA----AWSAMITAYVDEKLLGEALELFNLVPEK----NVGIWNTIIDGYV-- 345
M ++ ++ M+ YV+ L ALE + E+ N I+++++ G+V
Sbjct: 640 SAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLS 699
Query: 346 -RNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVT 404
+ + E + + LR C+ + S++ G + + +V L E T +
Sbjct: 700 QKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIF-LVTRLCKEGRTDES 758
Query: 405 NALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTK 464
N L+ + G VF L K+ D++ + +Y + +++ ++ SG
Sbjct: 759 NDLVQNVLERG-------VF-LEKAMDII-----MESYCSKKKHTKCMELITLVLKSGFV 805
Query: 465 PDEITFVGLLSACSHAGLVNQGRRV 489
P +F ++ G + R +
Sbjct: 806 PSFKSFCLVIQGLKKEGDAERAREL 830
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/324 (19%), Positives = 130/324 (40%), Gaps = 49/324 (15%)
Query: 179 VVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTI----AWTAMVKSYLDNGQFSEGYKLFL 234
++ + T+V+ +NG + A F + + + T+++ + + K+F
Sbjct: 195 MIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFD 254
Query: 235 EMPER-----NVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQN 285
M + N S++++I G R++EA L + M ++ + ++T ++ L
Sbjct: 255 VMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDR 314
Query: 286 KMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEK--------NVGIW 337
+++ A FD M + T +D +E N V K +V +
Sbjct: 315 GLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITY 374
Query: 338 NTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGF 397
N +I+GY ++G A L +M + +P V T ++ +G+ + + + V HL
Sbjct: 375 NALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELM---EGLCRVGKPYKAV-HL-- 428
Query: 398 EQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFAR 457
+ N L S D+VS+ +I GH + A ++ +
Sbjct: 429 -LKRMLDNGL---------------------SPDIVSYNVLIDGLCREGHMNTAYKLLSS 466
Query: 458 MVTSGTKPDEITFVGLLSACSHAG 481
M +PD +TF +++A G
Sbjct: 467 MNCFDIEPDCLTFTAIINAFCKQG 490
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/471 (23%), Positives = 203/471 (43%), Gaps = 75/471 (15%)
Query: 67 RRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSER----DVV 118
R G+L+E K + M D + ++I + + A I + + DV+
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 119 AQSAMVDGYAKAGRLDN--------------------------------AREVFDNMTER 146
+ M+ GY KAG ++N A EV D M +R
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233
Query: 147 NAF----SWTSLISGYFRCGRTEEALQLFDQMSER----SVVTWTTMVSGFAQNGLVDHA 198
+ + ++T LI R A++L D+M +R VVT+ +V+G + G +D A
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293
Query: 199 RRFFDLMP----EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPER----NVRSWNVMISG 250
+F + MP + N I +++S G++ + KL +M + +V ++N++I+
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINF 353
Query: 251 CLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIM----PFKD 302
+ AI + E MP N +S+ ++ G + K ++ A +Y + M + D
Sbjct: 354 LCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD 413
Query: 303 MAAWSAMITAYVDEKLLGEALELFNLVPEKNVG----IWNTIIDGYVRNGEAGEALRLFI 358
+ ++ M+TA + + +A+E+ N + K +NT+IDG + G+ G+A++L
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473
Query: 359 LMLRSCFRPCVTTMTSII--TSCDGMV-EIMQAHAMVIHLGFEQNTWVTNALITLYSKS- 414
M +P T +S++ S +G V E ++ +G N N+++ KS
Sbjct: 474 EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSR 533
Query: 415 -GDLCSAMLVFELLKS--KDVVSWTAMIVAYANHGHGHHALQVFARMVTSG 462
D LVF + + + S+T +I A G AL++ + G
Sbjct: 534 QTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 124/271 (45%), Gaps = 49/271 (18%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSE 114
N+ I L R+G L A + ++MPQ +++SYN ++ + K K + A + M
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 115 R----DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNA----FSWTSLISGYFRCGRTEE 166
R D+V + M+ K G++++A E+ + ++ + ++ ++I G + G+T +
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Query: 167 ALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLD 222
A++L D+M + + +T++++V G ++ G VD A +FF
Sbjct: 468 AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF-------------------- 507
Query: 223 NGQFSEGYKLFLEMPER-NVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTA 277
F M R N ++N ++ G + + D AI M +R N S+T
Sbjct: 508 --------HEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559
Query: 278 MVSGLAQNKMVEVARKYFDIMPFKDMAAWSA 308
++ GLA M + A + + + K + S+
Sbjct: 560 LIEGLAYEGMAKEALELLNELCNKGLMKKSS 590
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 144/308 (46%), Gaps = 32/308 (10%)
Query: 59 NVEITILGRRGKLKEARKLFDEMP----QRDAVSYNSMIAVYLKNKDVHGAETIFKAMSE 114
NV + + + G+L EA K ++MP Q + +++N ++ AE + M
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 337
Query: 115 R----DVVAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEE 166
+ VV + +++ + G L A ++ + M + N+ S+ L+ G+ + + +
Sbjct: 338 KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDR 397
Query: 167 ALQLFDQMSER----SVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNT----IAWTAMVK 218
A++ ++M R +VT+ TM++ ++G V+ A + + K I + ++
Sbjct: 398 AIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID 457
Query: 219 SYLDNGQFSEGYKLFLEMPERNVR----SWNVMISGCLSANRVDEAI---HLFETMPDR- 270
G+ + KL EM ++++ +++ ++ G +VDEAI H FE M R
Sbjct: 458 GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517
Query: 271 NHVSWTAMVSGLAQNKMVEVARKYFDIMPFK----DMAAWSAMITAYVDEKLLGEALELF 326
N V++ +++ GL +++ + A + M + + +++ +I E + EALEL
Sbjct: 518 NAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELL 577
Query: 327 NLVPEKNV 334
N + K +
Sbjct: 578 NELCNKGL 585
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 101/218 (46%), Gaps = 15/218 (6%)
Query: 321 EALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITS-C 379
E LE VP+ V +N +I GY + GE AL + M S P V T +I+ S C
Sbjct: 161 EILEGSGAVPD--VITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLC 215
Query: 380 DG--MVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSK----DVV 433
D + + M+ ++ + LI + + AM + + ++ + DVV
Sbjct: 216 DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVV 275
Query: 434 SWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITF-VGLLSACSHAGLVNQGRRVFDS 492
++ ++ G A++ M +SG +P+ IT + L S CS ++ + + D
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM 335
Query: 493 IKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIP 530
++ ++ + V ++ L++ L R GL+ A+D++ +P
Sbjct: 336 LRKGFSPS--VVTFNILINFLCRKGLLGRAIDILEKMP 371
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 187/421 (44%), Gaps = 39/421 (9%)
Query: 47 ISISHDWSLRKRNVEITILGRRGKLKEARKLFDEMP----QRDAVSYNSMIAVYLKNKDV 102
+ + H +L N + L GK+ +A L D M Q + V+Y ++ V K+
Sbjct: 169 VEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQT 228
Query: 103 HGAETIFKAMSER----DVVAQSAMVDGYAKAGRLDNAREVFDNMT----ERNAFSWTSL 154
A + + M ER D V S ++DG K G LDNA +F+ M + + +T+L
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288
Query: 155 ISGYFRCGRTEEALQLFDQMSER----SVVTWTTMVSGFAQNGLVDHARRFFDLMPEK-- 208
I G+ GR ++ +L M +R VV ++ ++ F + G + A M ++
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Query: 209 --NTIAWTAMVKSYLDNGQFSEGYKLFLEMPER----NVRSWNVMISGCLSANRVDEAIH 262
+T+ +T+++ + Q + + M + N+R++N++I+G AN +D+ +
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE 408
Query: 263 LFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIMPFK----DMAAWSAMITAYV 314
LF M R + V++ ++ G + +EVA++ F M + D+ ++ ++
Sbjct: 409 LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468
Query: 315 DEKLLGEALELFNLVP----EKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVT 370
D +ALE+F + E ++GI+N II G + +A LF + +P V
Sbjct: 469 DNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVK 528
Query: 371 TMTSIITSCDGMVEIMQAHAMVIHL---GFEQNTWVTNALITLYSKSGDLCSAMLVFELL 427
T +I + +A + + G N N LI + GD + + E +
Sbjct: 529 TYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Query: 428 K 428
K
Sbjct: 589 K 589
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 125/593 (21%), Positives = 252/593 (42%), Gaps = 85/593 (14%)
Query: 49 ISHDWSLRKRNVEITILGRRGKLKEARKLFDEM----PQRDAVSYNSMIAVYLKNKDVHG 104
+S+ LR V+I K +A LF EM P+ + ++ + +V + K
Sbjct: 38 VSYRERLRSGIVDI-------KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDL 90
Query: 105 AETIFKAMSERDVV----AQSAMVDGYAKAGRLDNAREVFDNMT----ERNAFSWTSLIS 156
+ K M + + S M++ + +L A + E + ++++LI+
Sbjct: 91 VLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLIN 150
Query: 157 GYFRCGRTEEALQLFDQMSER----SVVTWTTMVSGFAQNGLVDHARRFFDLMPE----K 208
G GR EAL+L D+M E +++T +V+G NG V A D M E
Sbjct: 151 GLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQP 210
Query: 209 NTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVR----SWNVMISGCLSANRVDEAIHLF 264
N + + ++K +GQ + +L +M ER ++ ++++I G +D A +LF
Sbjct: 211 NEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLF 270
Query: 265 ETMPDR----NHVSWTAMVSGLA-QNKMVEVARKYFDIMPFK---DMAAWSAMITAYVDE 316
M + + + +T ++ G + + A+ D++ K D+ A+SA+I +V E
Sbjct: 271 NEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKE 330
Query: 317 KLLGEALELFNLVPEKNVG----IWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTM 372
L EA EL + ++ + + ++IDG+ + + +A + LM
Sbjct: 331 GKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM------------ 378
Query: 373 TSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSK-- 430
+ G N N LI Y K+ + + +F + +
Sbjct: 379 --------------------VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 431 --DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRR 488
D V++ +I + G A ++F MV+ +PD +++ LL G +
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478
Query: 489 VFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVL---VALLGA 545
+F+ I+ + + L + Y+ ++ + A V++A D+ ++P + V + + G
Sbjct: 479 IFEKIEKS-KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGL 537
Query: 546 CKLHGNIKVANSIGQKLLSLEPTSSG-GYVLLSNAYAAEEQWDEFAQVRKRMK 597
CK G++ A+ + +K+ + +G Y +L A+ E + A++ + +K
Sbjct: 538 CK-KGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIK 589
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 105/496 (21%), Positives = 204/496 (41%), Gaps = 83/496 (16%)
Query: 108 IFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTER--------------------- 146
I K E D V S +++G GR+ A E+ D M E
Sbjct: 133 IIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGK 192
Query: 147 ------------------NAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTT 184
N ++ ++ + G+T A++L +M ER + V ++
Sbjct: 193 VSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSI 252
Query: 185 MVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFSEGYKLFLEMPER- 239
++ G ++G +D+A F+ M K + I +T +++ + G++ +G KL +M +R
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 240 ---NVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVAR 292
+V +++ +I + ++ EA L + M R + V++T+++ G + ++ A
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 293 KYFDIMPFK----DMAAWSAMITAYVDEKLLGEALELFNLVPEKNV----GIWNTIIDGY 344
D+M K ++ ++ +I Y L+ + LELF + + V +NT+I G+
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 345 VRNGEAGEALRLFILMLRSCFRPCVTTMTSIITS-CDG--------MVEIMQAHAMVIHL 395
G+ A LF M+ RP + + ++ CD + E ++ M + +
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDI 492
Query: 396 GFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSK----DVVSWTAMIVAYANHGHGHHA 451
G + N +I + + A +F L K DV ++ MI G A
Sbjct: 493 G------IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Query: 452 LQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVD 511
+F +M G P+ T+ L+ A G + ++ + IK ++ +VD
Sbjct: 547 DLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRC-GFSVDASTVKMVVD 605
Query: 512 MLGRAGLVNEAMDVVS 527
ML L +D++S
Sbjct: 606 MLSDGRLKKSFLDMLS 621
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/469 (23%), Positives = 204/469 (43%), Gaps = 70/469 (14%)
Query: 53 WSLRKRNVEITILGRRGKLKEARKLFDEMP----QRDAVSYNSMIAVYLKNKDVHGAETI 108
WSL + I + GK+ EA EM + D V Y S+I + ++ + +
Sbjct: 210 WSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKAL 269
Query: 109 FKAMSERD----VVAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFR 160
F + ER + + ++ G+ K G+L A E+F+ M ER N +++T LI G
Sbjct: 270 FDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCG 329
Query: 161 CGRTEEALQLFDQMSER----SVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNT----IA 212
G+T+EALQL + M E+ + VT+ +++ ++GLV A +LM ++ T I
Sbjct: 330 VGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNIT 389
Query: 213 WTAMVKSYLDNGQFSEGYKLFLEM------PERNVRSWNVMISGCLSANRVDEAIHLFET 266
+ ++ G E KL M + +V S+N +I G NR+ +A+ +++
Sbjct: 390 YNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDL 449
Query: 267 MPDR----NHVSWTAMVSGLAQ----NKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKL 318
+ ++ + V+ +++ + NK +E+ ++ D ++ ++AMI + +
Sbjct: 450 LVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGM 509
Query: 319 LGEALELF------NLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTM 372
L A L L P +V +N ++ + G +A RLF M R P V +
Sbjct: 510 LNVAKGLLCKMRVSELQP--SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSF 567
Query: 373 TSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDV 432
+I +I A ++++ + S++G S D+
Sbjct: 568 NIMIDGSLKAGDIKSAESLLVGM----------------SRAG------------LSPDL 599
Query: 433 VSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAG 481
+++ +I + G+ A+ F +MV SG +PD +L C G
Sbjct: 600 FTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQG 648
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/480 (23%), Positives = 214/480 (44%), Gaps = 45/480 (9%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSE 114
N+ + L R + +A L EM + D SYN++I + + K++ A + M
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKG 205
Query: 115 R----DVVAQSAMVDGYAKAGRLDNAREVFDNMT----ERNAFSWTSLISGYFRCGRTEE 166
+V ++D + KAG++D A M E + +TSLI G+ CG +
Sbjct: 206 SGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDR 265
Query: 167 ALQLFDQMSERS----VVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVK 218
LFD++ ER +T+ T++ GF + G + A F+ M E+ N +T ++
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325
Query: 219 SYLDNGQFSEGYKLFLEMPER----NVRSWNVMISGCLSANRVDEAIHLFETMPDR---- 270
G+ E +L M E+ N ++N++I+ V +A+ + E M R
Sbjct: 326 GLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385
Query: 271 NHVSWTAMVSGLAQNKMVEVARKYFDIM------PFKDMAAWSAMITAYVDEKLLGEALE 324
+++++ ++ GL ++ A K +M D+ +++A+I E L +AL+
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445
Query: 325 LFNLVPEK----NVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITS-C 379
+++L+ EK + N +++ ++ G+ +A+ L+ + S T T++I C
Sbjct: 446 IYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFC 505
Query: 380 D-GMVEIMQAHAMVIHLG-FEQNTWVTNALITLYSKSGDLCSAMLVFELLKSK----DVV 433
GM+ + + + + + + + N L++ K G L A +FE ++ DVV
Sbjct: 506 KTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVV 565
Query: 434 SWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSI 493
S+ MI G A + M +G PD T+ L++ G +++ FD +
Sbjct: 566 SFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 113/510 (22%), Positives = 212/510 (41%), Gaps = 44/510 (8%)
Query: 132 RLDNAREVFDNMTERN---AFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTT 184
+L NA VF + AF+ +L++ R E A + +M E V+ +
Sbjct: 53 QLKNAVSVFQQAVDSGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSG 112
Query: 185 MVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFSEGYKLFLEMPER- 239
++ + Q A LM ++ N ++K N + + L EM
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172
Query: 240 ---NVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVAR 292
+V S+N +I G +++A+ L M + V+W ++ + ++ A
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 293 KYFDIMPF----KDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVG----IWNTIIDGY 344
+ M F D+ ++++I + D L LF+ V E+ +NT+I G+
Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292
Query: 345 VRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGM---VEIMQAHAMVIHLGFEQNT 401
+ G+ EA +F M+ RP V T T +I G+ E +Q ++I E N
Sbjct: 293 CKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNA 352
Query: 402 WVTNALITLYSKSGDLCSAMLVFELLKSK----DVVSWTAMIVAYANHGHGHHALQVFAR 457
N +I K G + A+ + EL+K + D +++ ++ G A ++
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412
Query: 458 MV--TSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGR 515
M+ +S T PD I++ L+ ++Q ++D + +V + L++ +
Sbjct: 413 MLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT-NILLNSTLK 471
Query: 516 AGLVNEAMDVVSTIPPSEI---DEAVLVALLGACKLHGNIKVANSIGQKLL--SLEPTSS 570
AG VN+AM++ I S+I + + G CK G + VA + K+ L+P S
Sbjct: 472 AGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCK-TGMLNVAKGLLCKMRVSELQP-SV 529
Query: 571 GGYVLLSNAYAAEEQWDEFAQVRKRMKEKN 600
Y L ++ E D+ ++ + M+ N
Sbjct: 530 FDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 111/484 (22%), Positives = 214/484 (44%), Gaps = 62/484 (12%)
Query: 43 FTASISISHDWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKDV 102
+T +I I+ +K ++LGR KL + D +++++++ + V
Sbjct: 106 YTMTIMINCYCRKKKLLFAFSVLGRAWKLGY---------EPDTITFSTLVNGFCLEGRV 156
Query: 103 HGAETIFKAMSER----DVVAQSAMVDGYAKAGRLDNAREVFDNMTE----RNAFSWTSL 154
A + M E D+V S +++G GR+ A + D M E + ++ +
Sbjct: 157 SEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPV 216
Query: 155 ISGYFRCGRTEEALQLFDQMSER----SVVTWTTMVSGFAQNGLVDHARRFFDLMPEK-- 208
++ + G + AL LF +M ER SVV ++ ++ ++G D A F+ M K
Sbjct: 217 LNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGI 276
Query: 209 --NTIAWTAMVKSYLDNGQFSEGYKLFLEMPERN----VRSWNVMISGCLSANRVDEAIH 262
+ + +++++ ++G++ +G K+ EM RN V +++ +I + ++ EA
Sbjct: 277 KADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKE 336
Query: 263 LFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIMPFK----DMAAWSAMITAYV 314
L+ M R + +++ +++ G + + A + FD+M K D+ +S +I +Y
Sbjct: 337 LYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYC 396
Query: 315 DEKLLGEALELFNLVPEK----NVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVT 370
K + + + LF + K N +NT++ G+ ++G+ A LF M+ P V
Sbjct: 397 KAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVV 456
Query: 371 TMTSIITS-CDG--------MVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAM 421
T ++ CD + E MQ M + +G + N +I + + A
Sbjct: 457 TYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIG------IYNIIIHGMCNASKVDDAW 510
Query: 422 LVFELLKSK----DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSAC 477
+F L K DVV++ MI G A +F +M G PD+ T+ L+ A
Sbjct: 511 SLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA- 569
Query: 478 SHAG 481
H G
Sbjct: 570 -HLG 572
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 111/514 (21%), Positives = 219/514 (42%), Gaps = 82/514 (15%)
Query: 132 RLDNAREVFDNMTERNAF----SWTSLISGYFRCGRTEEALQLFDQMS----ERSVVTWT 183
++++A ++F++M + + L S R + + L M E + T T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 184 TMVSGFAQNGLVDHA----RRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKL---FLEM 236
M++ + + + A R + L E +TI ++ +V + G+ SE L +EM
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 237 PER-NVRSWNVMISGCLSANRVDEAIHLFETM------PDRNHVSWTAMVSGLAQNKMVE 289
+R ++ + + +I+G RV EA+ L + M PD V++ +++ L ++
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPD--EVTYGPVLNRLCKSGNSA 227
Query: 290 VARKYFDIMPFKDMAA----WSAMITAYVDEKLLGEALELFNLVPEK----NVGIWNTII 341
+A F M +++ A +S +I + + +AL LFN + K +V ++++I
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 342 DGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNT 401
G +G+ + ++ M+ P V T +
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFS---------------------------- 319
Query: 402 WVTNALITLYSKSGDLCSAMLVFELLKSK----DVVSWTAMIVAYANHGHGHHALQVFAR 457
ALI ++ K G L A ++ + ++ D +++ ++I + H A Q+F
Sbjct: 320 ----ALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 375
Query: 458 MVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAG 517
MV+ G +PD +T+ L+++ A V+ G R+F I + L Y+ LV ++G
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS-SKGLIPNTITYNTLVLGFCQSG 434
Query: 518 LVNEAMD-----VVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPT-SSG 571
+N A + V +PPS + +L L G C +G + A I +K+ T G
Sbjct: 435 KLNAAKELFQEMVSRGVPPSVVTYGIL--LDGLCD-NGELNKALEIFEKMQKSRMTLGIG 491
Query: 572 GYVL----LSNAYAAEEQWDEFAQVRKRMKEKNV 601
Y + + NA ++ W F + + + +V
Sbjct: 492 IYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDV 525
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 110/474 (23%), Positives = 197/474 (41%), Gaps = 62/474 (13%)
Query: 85 DAVSYNSMIAVYLKNKDVHGAETIFKAM----SERDVVAQSAMVDGYAKAGRLDNAREVF 140
D +Y S+I Y + KD+ A +F M R+ VA + ++ G A R+D A ++F
Sbjct: 252 DFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLF 311
Query: 141 DNMTERNAF----SWTSLISGYFRCGRTEEALQLFDQMSERSVV----TWTTMVSGFAQN 192
M + F ++T LI R EAL L +M E + T+T ++
Sbjct: 312 VKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQ 371
Query: 193 GLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFSEGYKLFLEMPER----NVRSW 244
+ AR M EK N I + A++ Y G + + M R N R++
Sbjct: 372 CKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTY 431
Query: 245 NVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIMPF 300
N +I G +N V +A+ + M +R + V++ +++ G ++ + A + +M
Sbjct: 432 NELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND 490
Query: 301 K----DMAAWSAMITAYVDEKLLGEALELFNLVPEK----NVGIWNTIIDGYVRNGEAGE 352
+ D +++MI + K + EA +LF+ + +K NV ++ +IDGY + G+ E
Sbjct: 491 RGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDE 550
Query: 353 ALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYS 412
A + ML P T ++I H + ++ T + ++ +
Sbjct: 551 AHLMLEKMLSKNCLPNSLTFNALI------------HGLCADGKLKEATLLEEKMVKIGL 598
Query: 413 KSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVG 472
+ +L+ LLK D HA F +M++SGTKPD T+
Sbjct: 599 QPTVSTDTILIHRLLKDGDF----------------DHAYSRFQQMLSSGTKPDAHTYTT 642
Query: 473 LLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVV 526
+ G + + ++ ++ + YS L+ G G N A DV+
Sbjct: 643 FIQTYCREGRLLDAEDMMAKMR-ENGVSPDLFTYSSLIKGYGDLGQTNFAFDVL 695
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 194/456 (42%), Gaps = 62/456 (13%)
Query: 151 WTSLISGYFRCGRTEEALQLFDQMSERSVV----TWTTMVSGFAQNGLVDHARRFFDLMP 206
+ +L++ R G +E Q++ +M E V T+ MV+G+ + G V+ A ++ +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 207 E----KNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIH 262
E + +T+++ Y +K+F EMP + R
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCR-------------------- 285
Query: 263 LFETMPDRNHVSWTAMVSGLAQNKMVEVARKYF----DIMPFKDMAAWSAMITAYVDEKL 318
RN V++T ++ GL + ++ A F D F + ++ +I + +
Sbjct: 286 -------RNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSER 338
Query: 319 LGEALELFNLVPE----KNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTS 374
EAL L + E N+ + +ID + +A L ML P V T +
Sbjct: 339 KSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNA 398
Query: 375 IITS-CD-GMVE-IMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSK- 430
+I C GM+E + ++ NT N LI Y KS + ++ ++L+ K
Sbjct: 399 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKV 458
Query: 431 --DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRR 488
DVV++ ++I G+ A ++ + M G PD+ T+ ++ + + V +
Sbjct: 459 LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD 518
Query: 489 VFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEA------MDVVSTIPPSEIDEAVLVAL 542
+FDS++ +N V Y+ L+D +AG V+EA M + +P S A++ L
Sbjct: 519 LFDSLEQK-GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 577
Query: 543 LGACKLHGNIKVANSIGQKL--LSLEPTSSGGYVLL 576
G +K A + +K+ + L+PT S +L+
Sbjct: 578 CA----DGKLKEATLLEEKMVKIGLQPTVSTDTILI 609
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 112/484 (23%), Positives = 204/484 (42%), Gaps = 74/484 (15%)
Query: 60 VEITILGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSER 115
V I L + K ++AR+L +M ++ + ++YN++I Y K + A + + M R
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 116 DVVAQS----AMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEA 167
+ + ++ GY K+ + A V + M ER + ++ SLI G R G + A
Sbjct: 423 KLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 168 LQLFDQMSERSVV----TWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKS 219
+L M++R +V T+T+M+ ++ V+ A FD + +K N + +TA++
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541
Query: 220 YLDNGQFSEGYKLFLEMPERNVR----SWNVMISGCLSANRVDEAIHLFETMPD---RNH 272
Y G+ E + + +M +N ++N +I G + ++ EA L E M +
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601
Query: 273 VSW-TAMVSGLAQNKMVEVARKYFDIM----PFKDMAAWSAMITAYVDEKLLGEALELFN 327
VS T ++ L ++ + A F M D ++ I Y E L +A ++
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMA 661
Query: 328 LVPEKNVG----IWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMV 383
+ E V ++++I GY G+ A + M + P T S+I
Sbjct: 662 KMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI------- 714
Query: 384 EIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLC--SAMLVF----ELLK-------SK 430
H + + G ++ + +LC S M+ F ELL+ +
Sbjct: 715 ----KHLLEMKYGKQKGS------------EPELCAMSNMMEFDTVVELLEKMVEHSVTP 758
Query: 431 DVVSWTAMIVAYANHGHGHHALQVFARMV-TSGTKPDEITFVGLLSACSHAGLVNQGRRV 489
+ S+ +I+ G+ A +VF M G P E+ F LLS C N+ +V
Sbjct: 759 NAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKV 818
Query: 490 FDSI 493
D +
Sbjct: 819 VDDM 822
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 98/448 (21%), Positives = 192/448 (42%), Gaps = 49/448 (10%)
Query: 67 RRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSER----DVV 118
R G A +L M R D +Y SMI K+K V A +F ++ ++ +VV
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV 533
Query: 119 AQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQLFDQM 174
+A++DGY KAG++D A + + M + N+ ++ +LI G G+ +EA L ++M
Sbjct: 534 MYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKM 593
Query: 175 S----ERSVVTWTTMVSGFAQNGLVDHARRFFDLM------PEKNTIAWTAMVKSYLDNG 224
+ +V T T ++ ++G DHA F M P+ +T +T +++Y G
Sbjct: 594 VKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHT--YTTFIQTYCREG 651
Query: 225 QFSEGYKLFLEMPERNVR----SWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWT 276
+ + + +M E V +++ +I G + + A + + M D + ++
Sbjct: 652 RLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFL 711
Query: 277 AMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGI 336
+++ L + K + ++ +M + ++ +LL + +E ++ P N
Sbjct: 712 SLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVV------ELLEKMVE-HSVTP--NAKS 762
Query: 337 WNTIIDGYVRNGEAGEALRLFILMLRS-CFRPCVTTMTSIITSCDGMVEIMQAHAMV--- 392
+ +I G G A ++F M R+ P ++++ C + + +A +V
Sbjct: 763 YEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDM 822
Query: 393 IHLGFEQNTWVTNALITLYSKSGDLCSAMLVFE-LLKS---KDVVSWTAMIVAYANHGHG 448
I +G LI K G+ VF+ LL+ +D ++W +I G
Sbjct: 823 ICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLV 882
Query: 449 HHALQVFARMVTSGTKPDEITFVGLLSA 476
++F M +G K T+ L+
Sbjct: 883 EAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 115/541 (21%), Positives = 239/541 (44%), Gaps = 82/541 (15%)
Query: 87 VSYNSMIAVYLKNK-DVHGAETIFKAMSER----DVVAQSAMVDGYAKAGRLDNAREVFD 141
+SYN+++ +++K ++ AE +FK M E +V + ++ G+ AG +D A +FD
Sbjct: 170 LSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFD 229
Query: 142 NMTER----NAFSWTSLISGYFRCGRTEEALQLFDQMS----ERSVVTWTTMVSGFAQNG 193
M + N ++ +LI GY + + ++ +L M+ E +++++ +++G + G
Sbjct: 230 KMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREG 289
Query: 194 --------LVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPER----NV 241
L + RR + L + + + ++K Y G F + + EM +V
Sbjct: 290 RMKEVSFVLTEMNRRGYSL----DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSV 345
Query: 242 RSWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQ----NKMVEVARK 293
++ +I A ++ A+ + M R N ++T +V G +Q N+ V R+
Sbjct: 346 ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLRE 405
Query: 294 YFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEK----NVGIWNTIIDGYVRNGE 349
D + ++A+I + + +A+ + + EK +V ++T++ G+ R+ +
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465
Query: 350 AGEALRLFILMLRSCFRPCVTTMTSIITS-CDG--MVEIMQAHAMVIHLGFEQNTWVTNA 406
EALR+ M+ +P T +S+I C+ E + ++ +G + + A
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 525
Query: 407 LITLYSKSGDLCSAMLVFELLKSK----DVVSWTAMIVAYANHGHGHHALQVFARMVTSG 462
LI Y GDL A+ + + K DVV+++ +I A ++ ++
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE 585
Query: 463 TKPDEITFVGLLSACSH---------------AGLVNQGRRVFDSIKG--------AYNL 499
+ P ++T+ L+ CS+ G++ + +VF+S+ G AYN+
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNI 645
Query: 500 NLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSE--IDEAVLVALLGACKLHGNIKVANS 557
+ H C RAG + +A + + S + ++AL+ A G + NS
Sbjct: 646 MI---HGHC------RAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNS 696
Query: 558 I 558
+
Sbjct: 697 V 697
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 119/501 (23%), Positives = 218/501 (43%), Gaps = 77/501 (15%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSE 114
NV I L R G++KE + EM +R D V+YN++I Y K + H A + M
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
Query: 115 R----DVVAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEE 166
V+ ++++ KAG ++ A E D M R N ++T+L+ G+ + G E
Sbjct: 339 HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 167 ALQLFDQMSER----SVVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVK 218
A ++ +M++ SVVT+ +++G G ++ A + M EK + ++++ ++
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Query: 219 SYLDNGQFSEGYKLFLEMPERNVR----SWNVMISGCLSANRVDEAIHLFETMPDRNHVS 274
+ + E ++ EM E+ ++ +++ +I G R EA L+E M
Sbjct: 459 GFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM------- 511
Query: 275 WTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEK-- 332
+ GL ++ ++A+I AY E L +AL+L N + EK
Sbjct: 512 ---LRVGLPPDEF-----------------TYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Query: 333 --NVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHA 390
+V ++ +I+G + EA RL + + P T ++I +C +
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNI-------- 603
Query: 391 MVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSK----DVVSWTAMIVAYANHG 446
E + V +LI + G + A VFE + K D ++ MI + G
Sbjct: 604 -------EFKSVV--SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAG 654
Query: 447 HGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHY 506
A ++ MV SG +T + L+ A G VN+ V + + L+ + E
Sbjct: 655 DIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELS-EAEQA 713
Query: 507 SCLVDMLGRAGLVNEAMDVVS 527
LV++ R G ++ +DV++
Sbjct: 714 KVLVEINHREGNMDVVLDVLA 734
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 123/286 (43%), Gaps = 23/286 (8%)
Query: 333 NVGIWNTIIDGYVRNGEAGEALRLFILM-LRSCFRPCVTTMTSIITSC-----DGMVEIM 386
NV +N +I G+ G AL LF M + C VT T I C D +++
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLL 263
Query: 387 QAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLK----SKDVVSWTAMIVAY 442
++ A+ G E N N +I + G + V + S D V++ +I Y
Sbjct: 264 RSMALK---GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGY 320
Query: 443 ANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLK 502
G+ H AL + A M+ G P IT+ L+ + AG +N+ D ++ L
Sbjct: 321 CKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR-VRGLCPN 379
Query: 503 VEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLV--ALL-GAC---KLHGNIKVAN 556
Y+ LVD + G +NEA V+ + + +V+ AL+ G C K+ I V
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439
Query: 557 SIGQKLLSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEKNVK 602
+ +K LS + S Y + + + DE +V++ M EK +K
Sbjct: 440 DMKEKGLSPDVVS---YSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 143/646 (22%), Positives = 274/646 (42%), Gaps = 106/646 (16%)
Query: 41 RNFTASISISHDWSLRKRNVE-------ITILGRRGKLKEARKLFDEM------PQRDAV 87
RN A+ + H+ N++ I ++ + G +++A+ LFD M PQ A
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQ--AQ 383
Query: 88 SYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQ----SAMVDGYAKAGRLDNAREVFDNM 143
+Y S+I Y + K+V + M +R++V +V G +G LD A + M
Sbjct: 384 AYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEM 443
Query: 144 ----TERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVV----TWTTMVSGFAQNGLV 195
N +T+LI + + R +A+++ +M E+ + + +++ G ++ +
Sbjct: 444 IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRM 503
Query: 196 DHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGC 251
D AR F M E N + A + Y++ +F+ K EM E V V+ +G
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL 563
Query: 252 LS----ANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIMPFK-- 301
++ +V EA + +M D+ + ++T +++GL +N V+ A + F M K
Sbjct: 564 INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Query: 302 --DMAAWSAMITAYVDEKLLGEALELFNLVPEK----NVGIWN----------------- 338
D+ ++ +I + + +A +F+ + E+ NV I+N
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 339 ------------------TIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCD 380
TIIDGY ++G+ EA RLF M P T+++ C
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743
Query: 381 GMVEIMQAHAM--VIHLGFEQNTWVTNALITLYSKSG--DLCSAML------VFELLKSK 430
+ ++ +A + G +T NALI K G +L + +L F+
Sbjct: 744 RLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKP 803
Query: 431 DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVF 490
+ V++ MI G+ A ++F +M + P IT+ LL+ G + VF
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863
Query: 491 DSIKGAYNLNLKVEH--YSCLVDMLGRAGLVNEAMDVVSTI-PPSEIDEAVLV------A 541
D A ++ +H YS +++ + G+ +A+ +V + + +D+ + A
Sbjct: 864 DEAIAA---GIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRA 920
Query: 542 LLGACKLHGNIKVANSIGQKLLSLE--PTSSGGYVLLSNAYAAEEQ 585
LL G ++VA + + ++ L+ P S+ L++ + + Q
Sbjct: 921 LLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQ 966
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/498 (20%), Positives = 209/498 (41%), Gaps = 57/498 (11%)
Query: 101 DVHGAETIFKAMSERDVV----AQSAMVDGYAKAGRLDNAREVFDNM----TERNAFSWT 152
+V GA + ++M + +V ++DG K RL++A+ + M + +++
Sbjct: 257 NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYS 316
Query: 153 SLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHARRFFDLMPEK 208
LI G + + A L +M + + + ++ G+++ A+ FD M
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS 376
Query: 209 NTI----AWTAMVKSYLDNGQFSEGYKLFLEMPERNV----RSWNVMISGCLSANRVDEA 260
I A+ ++++ Y +GY+L +EM +RN+ ++ ++ G S+ +D A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 261 IHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIMPFK----DMAAWSAMITA 312
++ + M N V +T ++ QN A + M + D+ ++++I
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 313 YVDEKLLGEA----LELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSC-FRP 367
K + EA +E+ + N + I GY+ E A + ++ +R C P
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADK-YVKEMRECGVLP 555
Query: 368 CVTTMTSIITS-CD--GMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVF 424
T +I C ++E A+ ++ G + L+ K+ + A +F
Sbjct: 556 NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIF 615
Query: 425 ELLKSK----DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHA 480
++ K DV S+ +I ++ G+ A +F MV G P+ I + LL +
Sbjct: 616 REMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRS 675
Query: 481 GLVNQGRRVFD--SIKGAYNLNLKVEHYSCLVDMLGRAGLVNEA------MDVVSTIPPS 532
G + + + + D S+KG L+ Y ++D ++G + EA M + +P
Sbjct: 676 GEIEKAKELLDEMSVKG---LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP-- 730
Query: 533 EIDEAVLVALL-GACKLH 549
D V L+ G C+L+
Sbjct: 731 --DSFVYTTLVDGCCRLN 746
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 103/542 (19%), Positives = 204/542 (37%), Gaps = 75/542 (13%)
Query: 85 DAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQ----SAMVDGYAKAGRLDNAREVF 140
D V + + Y+ + A +F + ++V + ++D + RLD +V+
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209
Query: 141 DNMTERNAF----SWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVD 196
M ERN ++ LI + R G + + + +E+ T T V G + +
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFK-TEKEFRTATLNVDGALK---LK 265
Query: 197 HARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNV----RSWNVMISGCL 252
+ L+P K T + ++ + + L +EM V +++++I G L
Sbjct: 266 ESMICKGLVPLKYT--YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLL 323
Query: 253 SANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDM----A 304
D A L M + + +++ ++E A+ FD M +
Sbjct: 324 KGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQ 383
Query: 305 AWSAMITAYVDEKLLGEALEL--------------------------------FNLVPE- 331
A++++I Y EK + + EL +N+V E
Sbjct: 384 AYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEM 443
Query: 332 ------KNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI 385
NV I+ T+I +++N G+A+R+ M P + S+I +
Sbjct: 444 IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRM 503
Query: 386 MQAHAMVIHL---GFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDV----VSWTAM 438
+A + ++ + G + N + A I+ Y ++ + SA + ++ V V T +
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL 563
Query: 439 IVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYN 498
I Y G A + MV G D T+ L++ V+ +F ++G
Sbjct: 564 INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK-G 622
Query: 499 LNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVLV--ALLGACKLHGNIKVAN 556
+ V Y L++ + G + +A + + + V++ LLG G I+ A
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 557 SI 558
+
Sbjct: 683 EL 684
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/468 (20%), Positives = 209/468 (44%), Gaps = 72/468 (15%)
Query: 67 RRGKLKEARKLFDEM----PQRDAVSYNSMIAVYLKNKDVHGAETIFKAMS----ERDVV 118
R KL +A LF +M P V +N +++ +K K ++ K M D+
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 119 AQSAMVDGYAKAGRLDNAREVFDNMT----ERNAFSWTSLISGYFRCGRTEEALQLFDQM 174
+ +++ + ++ A + M E + + SL++G+ R R +A+ L D+M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 175 SE----RSVVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQF 226
E +V + ++ + V+ A FF + K N + +TA+V ++ ++
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 227 SEGYKLFLEMPER----NVRSWNVMISGCLSANRVDEAIHLFETMP----DRNHVSWTAM 278
S+ +L +M ++ NV +++ ++ + +V EA LFE M D + V+++++
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 279 VSGLAQNKMVEVARKYFDIMPFK----DMAAWSAMITAYVDEKLLGEALELFNLVPEK-- 332
++GL + ++ A + FD+M K D+ +++ +I + K + + ++LF + ++
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 333 --NVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHA 390
N +NT+I G+ + G+ +A F +
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFF--------------------------------S 389
Query: 391 MVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSK----DVVSWTAMIVAYANHG 446
+ G + W N L+ +G+L A+++FE ++ + D+V++T +I G
Sbjct: 390 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 449
Query: 447 HGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIK 494
A +F + G KPD +T+ ++S GL+++ ++ +K
Sbjct: 450 KVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 16/166 (9%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMS- 113
N I + ++++ KLF EM QR + V+YN++I + + DV A+ F M
Sbjct: 334 NTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF 393
Query: 114 ---ERDVVAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEE 166
D+ + ++ G G L+ A +F++M +R + ++T++I G + G+ EE
Sbjct: 394 FGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEE 453
Query: 167 ALQLFDQMSER----SVVTWTTMVSGFAQNGLVDHARRFFDLMPEK 208
A LF +S + +VT+TTM+SG GL+ + M ++
Sbjct: 454 AWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 160/334 (47%), Gaps = 36/334 (10%)
Query: 70 KLKEARKLFDEMP----QRDAVSYNSMIAVYLKNKDVHGAETIFKAM----SERDVVAQS 121
++++A LFD++ + + V+Y ++I KN+ ++ A +F M S +VV +
Sbjct: 168 RIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYN 227
Query: 122 AMVDGYAKAGRLDNA----REVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSER 177
A+V G + GR +A R++ E N ++T+LI + + G+ EA +L++ M +
Sbjct: 228 ALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQM 287
Query: 178 S----VVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFSEG 229
S V T+ ++++G GL+D AR+ F LM N + +T ++ + + + +G
Sbjct: 288 SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDG 347
Query: 230 YKLFLEMPER----NVRSWNVMISGCLSANRVDEAIHLFETMPDRNHV----SWTAMVSG 281
K+F EM ++ N ++ V+I G R D A +F M R ++ ++ G
Sbjct: 348 MKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDG 407
Query: 282 LAQNKMVEVARKYFDIMPFKDM----AAWSAMITAYVDEKLLGEALELFNLVPEK----N 333
L N VE A F+ M ++M ++ +I + +A +LF + K N
Sbjct: 408 LCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPN 467
Query: 334 VGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRP 367
V + T+I G+ R G EA LF M F P
Sbjct: 468 VITYTTMISGFCRRGLIHEADSLFKKMKEDGFLP 501
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 156/318 (49%), Gaps = 42/318 (13%)
Query: 62 ITILGRRGKLKEARKLFDEM----PQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSER-- 115
I L + L A +LF++M + + V+YN+++ + A + + M +R
Sbjct: 195 IRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRI 254
Query: 116 --DVVAQSAMVDGYAKAGRLDNAREVFDNMTE----RNAFSWTSLISGYFRCGRTEEALQ 169
+V+ +A++D + K G+L A+E+++ M + + F++ SLI+G G +EA Q
Sbjct: 255 EPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQ 314
Query: 170 LFDQMSERSV----VTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYL 221
+F M V +TT++ GF ++ V+ + F M +K NTI +T +++ Y
Sbjct: 315 MFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYC 374
Query: 222 DNGQFSEGYKLFLEMPER----NVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHV 273
G+ ++F +M R ++R++NV++ G +V++A+ +FE M R N V
Sbjct: 375 LVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIV 434
Query: 274 SWTAMVSGLAQNKMVEVARKYFDIMPFKDMA----AWSAMITAYVDEKLLGEALELFNLV 329
++T ++ G+ + VE A F + K M ++ MI+ + L+ EA LF +
Sbjct: 435 TYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Query: 330 PEKNVGIWNTIIDGYVRN 347
E DG++ N
Sbjct: 495 KE----------DGFLPN 502
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 196/442 (44%), Gaps = 64/442 (14%)
Query: 62 ITILGRRGKLKEARKLFDEM-----PQRDAVSYNSMIAVYLKNKDVHGAETIFKAMS--- 113
++++ + + LF++M P M V L ++ + + K M
Sbjct: 90 LSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGF 149
Query: 114 ERDVVAQSAMVDGYAKAGRLDNAREVFDNMT----ERNAFSWTSLISGYFRCGRTEEALQ 169
E D+V +++++GY R+++A +FD + + N ++T+LI + A++
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 170 LFDQM----SERSVVTWTTMVSGFAQNGL-VDHARRFFDLMP---EKNTIAWTAMVKSYL 221
LF+QM S +VVT+ +V+G + G D A D+M E N I +TA++ +++
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 222 DNGQFSEGYKLFLEMPERNVR----SWNVMISGCLSANRVDEAIHLFETMPDR----NHV 273
G+ E +L+ M + +V ++ +I+G +DEA +F M N V
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEV 329
Query: 274 SWTAMVSGLAQNKMVEVARKYFDIMPFKDMAA----WSAMITAYVDEKLLGEALELFNLV 329
+T ++ G ++K VE K F M K + A ++ +I Y A E+FN +
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389
Query: 330 PEK----NVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI 385
+ ++ +N ++DG NG+ +AL +F M + + T T II GM +
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIII---QGMCK- 445
Query: 386 MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANH 445
LG ++ + + +L+SK +V+++T MI +
Sbjct: 446 ---------LGKVEDAF--DLFCSLFSKG-------------MKPNVITYTTMISGFCRR 481
Query: 446 GHGHHALQVFARMVTSGTKPDE 467
G H A +F +M G P+E
Sbjct: 482 GLIHEADSLFKKMKEDGFLPNE 503
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 171/383 (44%), Gaps = 70/383 (18%)
Query: 145 ERNAFSWTSLISGYFRCGRTEEALQLFDQM----SERSVVTWTTMVSGFAQNGLVDHARR 200
E + ++TSL++GY R E+A+ LFDQ+ + +VVT+TT++ +N ++HA
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 201 FFDLM----PEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPER----NVRSWNVMISGCL 252
F+ M N + + A+V + G++ + L +M +R NV ++ +I +
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 253 SANRVDEAIHLFETM------PDRNHVSWTAMVSGLAQNKMVEVARKYFDIMP----FKD 302
++ EA L+ M PD ++ ++++GL +++ AR+ F +M + +
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDV--FTYGSLINGLCMYGLLDEARQMFYLMERNGCYPN 327
Query: 303 MAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTI-----IDGYVRNGEAGEALRLF 357
++ +I + K + + +++F + +K V + NTI I GY G A +F
Sbjct: 328 EVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV-VANTITYTVLIQGYCLVGRPDVAQEVF 386
Query: 358 ILMLRSCFRPCVTTMTSII--TSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSG 415
M P + T ++ C+G VE
Sbjct: 387 NQMSSRRAPPDIRTYNVLLDGLCCNGKVE------------------------------- 415
Query: 416 DLCSAMLVFELLKSKD----VVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFV 471
A+++FE ++ ++ +V++T +I G A +F + + G KP+ IT+
Sbjct: 416 ---KALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYT 472
Query: 472 GLLSACSHAGLVNQGRRVFDSIK 494
++S GL+++ +F +K
Sbjct: 473 TMISGFCRRGLIHEADSLFKKMK 495
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 167/336 (49%), Gaps = 41/336 (12%)
Query: 62 ITILGRRGKLKEARKLFDEMP----QRDAVSYNSMIAVYLKNKDVHGAETIFKAMSER-- 115
I L + G + A LFD+M + D V Y S++ + A+++ + M++R
Sbjct: 184 IDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKI 243
Query: 116 --DVVAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQ 169
DV+ +A++D + K G+ +A E+++ M N F++TSLI+G+ G +EA Q
Sbjct: 244 KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQ 303
Query: 170 LFDQMSER----SVVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYL 221
+F M + VV +T++++GF + VD A + F M +K NTI +T +++ +
Sbjct: 304 MFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFG 363
Query: 222 DNGQFSEGYKLFLEMPER----NVRSWNVMISGCLSAN-RVDEAIHLFETMPDR------ 270
G+ + ++F M R N+R++NV++ CL N +V +A+ +FE M R
Sbjct: 364 QVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLH-CLCYNGKVKKALMIFEDMQKREMDGVA 422
Query: 271 -NHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDM----AAWSAMITAYVDEKLLGEALEL 325
N ++ ++ GL N +E A F+ M ++M ++ +I + A+ L
Sbjct: 423 PNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNL 482
Query: 326 FNLVPEK----NVGIWNTIIDGYVRNGEAGEALRLF 357
F +P K NV + T+I G R G EA LF
Sbjct: 483 FCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLF 518
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 188/388 (48%), Gaps = 42/388 (10%)
Query: 145 ERNAFSWTSLISGYFRCGRTEEALQLFDQMSER----SVVTWTTMVSGFAQNGLVDHARR 200
E + ++TSLI+G+ R EEA+ + +QM E VV +TT++ +NG V++A
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 201 FFDLMP----EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVR----SWNVMISGCL 252
FD M + + +T++V ++G++ + L M +R ++ ++N +I +
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 253 SANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIMP----FKDMA 304
+ +A L+ M N ++T++++G V+ AR+ F +M F D+
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 305 AWSAMITAYVDEKLLGEALELFNLVPEK----NVGIWNTIIDGYVRNGEAGEALRLFILM 360
A++++I + K + +A+++F + +K N + T+I G+ + G+ A +F M
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 361 LRSCFRPCVTTMTSIITSC---DGMV-------EIMQAHAMVIHLGFEQNTWVTNALITL 410
+ P + T +++ C +G V E MQ M G N W N L+
Sbjct: 379 VSRGVPPNIRTY-NVLLHCLCYNGKVKKALMIFEDMQKREMD---GVAPNIWTYNVLLHG 434
Query: 411 YSKSGDLCSAMLVFELLKSKDV----VSWTAMIVAYANHGHGHHALQVFARMVTSGTKPD 466
+G L A++VFE ++ +++ +++T +I G +A+ +F + + G KP+
Sbjct: 435 LCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPN 494
Query: 467 EITFVGLLSACSHAGLVNQGRRVFDSIK 494
+T+ ++S GL ++ +F +K
Sbjct: 495 VVTYTTMISGLFREGLKHEAHVLFRKMK 522
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 126/255 (49%), Gaps = 31/255 (12%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSE 114
N I + GK +A +L++EM + + +Y S+I + V A +F M
Sbjct: 251 NALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMET 310
Query: 115 R----DVVAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEE 166
+ DVVA +++++G+ K ++D+A ++F M+++ N ++T+LI G+ + G+
Sbjct: 311 KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNV 370
Query: 167 ALQLFDQMSERSVV----TWTTMVSGFAQNGLVDHARRFFDLMPEK-------NTIAWTA 215
A ++F M R V T+ ++ NG V A F+ M ++ N +
Sbjct: 371 AQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNV 430
Query: 216 MVKSYLDNGQFSEGYKLFLEMPERNV----RSWNVMISGCLSANRVDEAIHLFETMPDR- 270
++ NG+ + +F +M +R + ++ ++I G A +V A++LF ++P +
Sbjct: 431 LLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKG 490
Query: 271 ---NHVSWTAMVSGL 282
N V++T M+SGL
Sbjct: 491 VKPNVVTYTTMISGL 505
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 122/274 (44%), Gaps = 25/274 (9%)
Query: 345 VRNG----EAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHL----- 395
+RNG + EAL LF M+ S P + T ++ ++ M+ +VI+L
Sbjct: 44 LRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLN----VIAKMKKFDVVINLCDHLQ 99
Query: 396 --GFEQNTWVTNALITLYSKSGD--LCSAML--VFELLKSKDVVSWTAMIVAYANHGHGH 449
G + + N L+ + +S L S+ L + +L D+V++T++I +
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 450 HALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCL 509
A+ + +MV G KPD + + ++ + G VN +FD ++ Y + V Y+ L
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMEN-YGIRPDVVMYTSL 218
Query: 510 VDMLGRAGLVNEAMDVVSTIPPSEIDEAVLV--ALLGACKLHGNIKVANSIGQKL--LSL 565
V+ L +G +A ++ + +I V+ AL+ A G A + ++ +S+
Sbjct: 219 VNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI 278
Query: 566 EPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKEK 599
P + Y L N + E DE Q+ M+ K
Sbjct: 279 AP-NIFTYTSLINGFCMEGCVDEARQMFYLMETK 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 19/162 (11%)
Query: 65 LGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSER--DVV 118
G+ GK A+++F M R + +YN ++ N V A IF+ M +R D V
Sbjct: 362 FGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGV 421
Query: 119 AQS-----AMVDGYAKAGRLDNAREVFDNMTERN----AFSWTSLISGYFRCGRTEEALQ 169
A + ++ G G+L+ A VF++M +R ++T +I G + G+ + A+
Sbjct: 422 APNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVN 481
Query: 170 LFDQMSER----SVVTWTTMVSGFAQNGLVDHARRFFDLMPE 207
LF + + +VVT+TTM+SG + GL A F M E
Sbjct: 482 LFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/496 (21%), Positives = 218/496 (43%), Gaps = 76/496 (15%)
Query: 59 NVEITILGRRGKLKEARKLFDEMP----QRDAVSYNSMIAVYLKNKDVHGAETIFKAM-- 112
N ++ + + G++K A + MP + D +SYNS+I + +N D+ A + +++
Sbjct: 60 NSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRA 119
Query: 113 -----SERDVVAQSAMVDGYAKAGRLDNAREVFDNM------TERNAFSWTSLISGYFRC 161
+ D+V+ +++ +G++K LD EVF M N ++++ I + +
Sbjct: 120 SHGFICKPDIVSFNSLFNGFSKMKMLD---EVFVYMGVMLKCCSPNVVTYSTWIDTFCKS 176
Query: 162 GRTEEALQLFDQMSERS----VVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAW 213
G + AL+ F M + VVT+T ++ G+ + G ++ A + M N + +
Sbjct: 177 GELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTY 236
Query: 214 TAMVKSYLDNGQFSEGYKLFLEMPERNVRS----WNVMISGCLSANRVDEAIHLFETMPD 269
TA++ + G+ +++ M E V + +I G D A+ M +
Sbjct: 237 TALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLN 296
Query: 270 R----NHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALEL 325
+ + ++ ++SGL N ++ A + + E +E
Sbjct: 297 QGMRLDITAYGVIISGLCGNGKLKEATE-------------------------IVEDMEK 331
Query: 326 FNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI 385
+LVP+ + I+ T+++ Y ++G A+ ++ ++ F P V ++++I DG+ +
Sbjct: 332 SDLVPD--MVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMI---DGIAKN 386
Query: 386 MQAHAMVIHLGFEQ-NTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVS----WTAMIV 440
Q H +++ E+ N + LI K GD +F + +V +T+ I
Sbjct: 387 GQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIA 446
Query: 441 AYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLN 500
G+ A ++ RMV G D + + L+ + GL+ + R+VFD + LN
Sbjct: 447 GLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEM-----LN 501
Query: 501 LKVEHYSCLVDMLGRA 516
+ S + D+L RA
Sbjct: 502 SGISPDSAVFDLLIRA 517
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 115/537 (21%), Positives = 223/537 (41%), Gaps = 120/537 (22%)
Query: 82 PQRDAVSYNSMIAVYLKNKDVHGAETIFKAM----SERDVVAQSAMVDGYAKAGRLDNAR 137
P R S+NS+++ K V AE I +M E DV++ ++++DG+ + G + +A
Sbjct: 54 PHRS--SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSAS 111
Query: 138 EVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVVTWTTMVSGFAQNGLVDH 197
V +++ + F + + +V++ ++ +GF++ ++D
Sbjct: 112 LVLESLRASHGF------------------------ICKPDIVSFNSLFNGFSKMKMLDE 147
Query: 198 ARRFFDLMPE---KNTIAWTAMVKSYLDNGQFSEGYKLFLEMPER----NVRSWNVMISG 250
+ +M + N + ++ + ++ +G+ K F M NV ++ +I G
Sbjct: 148 VFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDG 207
Query: 251 CLSANRVDEAIHLFETMP----DRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAW 306
A ++ A+ L++ M N V++TA++ G + ++ A + + M
Sbjct: 208 YCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRM-------- 259
Query: 307 SAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFR 366
V++++ E N ++ TIIDG+ + G++ A++ ML R
Sbjct: 260 -------VEDRV------------EPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300
Query: 367 PCVTTMTSIITSCDG---------MVEIMQAHAMV------------------------- 392
+T II+ G +VE M+ +V
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNM 360
Query: 393 ----IHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHG 448
I GFE + + +I +K+G L A++ F + K+ DV+ +T +I A G
Sbjct: 361 YHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVM-YTVLIDALCKEGDF 419
Query: 449 HHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAY-----NLNLKV 503
++F+++ +G PD+ + + AGL QG V D+ K L L +
Sbjct: 420 IEVERLFSKISEAGLVPDKFMYTSWI-----AGLCKQGNLV-DAFKLKTRMVQEGLLLDL 473
Query: 504 EHYSCLVDMLGRAGLVNEAMDVVSTIPPSEI--DEAVLVALLGACKLHGNIKVANSI 558
Y+ L+ L GL+ EA V + S I D AV L+ A + GN+ A+ +
Sbjct: 474 LAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDL 530
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 201/462 (43%), Gaps = 55/462 (11%)
Query: 88 SYNSMIAVYLKNKDVHGAETIFKAMS----ERDVVAQSAMVDGYAKAGRLDNAREVFDNM 143
+Y+ +I + + + A + M E D+V +++++G+ R+ +A + M
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 144 TE----RNAFSWTSLISGYFRCGRTEEALQLFDQM----SERSVVTWTTMVSGFAQNGLV 195
E ++F++ +LI G FR R EA+ L D+M + +VT+ +V+G + G +
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 196 DHARRFFDLMP----EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVR----SWNVM 247
D A M E + + ++ + + ++ LF EM + +R ++N +
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 248 ISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLA-QNKMVEVARKYFDIMPFK- 301
I + R +A L M +R N V+++A++ + K+VE A K +D M +
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE-AEKLYDEMIKRS 356
Query: 302 ---DMAAWSAMITAYVDEKLLGEALELFNLVPEK----NVGIWNTIIDGYVRNGEAGEAL 354
D+ +S++I + L EA +F L+ K NV +NT+I G+ + E +
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 355 RLFILMLRSCFRPCVTTMTSII------TSCDGMVEIMQAHAMVIHLGFEQNTWVTNALI 408
LF M + T T++I CD + + ++ G + + L+
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ---MVSDGVLPDIMTYSILL 473
Query: 409 TLYSKSGDLCSAMLVFELLK----SKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTK 464
+G + +A++VFE L+ D+ ++ MI G +F + G K
Sbjct: 474 DGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 533
Query: 465 PDEITFVGLLSACSHAGLVNQGRRVFDSIK--------GAYN 498
P+ +T+ ++S GL + +F +K G YN
Sbjct: 534 PNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYN 575
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 160/334 (47%), Gaps = 56/334 (16%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSE 114
N I L G+ +A +L +M +R + V+++++I ++K + AE ++ M +
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 115 R----DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAF----SWTSLISGYFRCGRTEE 166
R D+ S++++G+ RLD A+ +F+ M ++ F ++ +LI G+ + R +E
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 167 ALQLFDQMSERSVV----TWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVK 218
++LF +MS+R +V T+TT++ GF Q D+A+ F M + + ++ ++
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 219 SYLDNGQFSEGYKLFLEMP----ERNVRSWNVMISGCLSANRVDEAIHLFETMPDR---- 270
+NG+ +F + E ++ ++N+MI G A +V++ LF ++ +
Sbjct: 475 GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 534
Query: 271 NHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVP 330
N V++T M+SG + + E A F E+ P
Sbjct: 535 NVVTYTTMMSGFCRKGLKEEADALFR---------------------------EMKEEGP 567
Query: 331 EKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSC 364
+ G +NT+I ++R+G+ + L I +RSC
Sbjct: 568 LPDSGTYNTLIRAHLRDGDKAASAEL-IREMRSC 600
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/388 (20%), Positives = 158/388 (40%), Gaps = 58/388 (14%)
Query: 132 RLDNAREVFDNMTERNAFS----WTSLISGYFRCGRTEEALQLFDQMSE----RSVVTWT 183
+LD+A +F +M + F ++ L+S + + + + L +QM ++ T++
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 184 TMVSGFAQNGLVDHA----RRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPER 239
+++ F + + A + L E + + +++ + + S+ L +M E
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 240 NVR----SWNVMISGCLSANRVDEAIHLFETM------PDRNHVSWTAMVSGLAQNKMVE 289
+ ++N +I G NR EA+ L + M PD V++ +V+GL + ++
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDL--VTYGIVVNGLCKRGDID 238
Query: 290 VARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGE 349
+A ++ M + E V I+NTIID
Sbjct: 239 LA-----------LSLLKKMEQGKI----------------EPGVVIYNTIIDALCNYKN 271
Query: 350 AGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMV---IHLGFEQNTWVTNA 406
+AL LF M RP V T S+I A ++ I N +A
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 407 LITLYSKSGDLCSAMLVF-ELLK---SKDVVSWTAMIVAYANHGHGHHALQVFARMVTSG 462
LI + K G L A ++ E++K D+ +++++I + H A +F M++
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 463 TKPDEITFVGLLSACSHAGLVNQGRRVF 490
P+ +T+ L+ A V++G +F
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELF 419
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 146/620 (23%), Positives = 259/620 (41%), Gaps = 71/620 (11%)
Query: 88 SYNSMIAVYLKNKDVHGAETIFKAMS----ERDVVAQSAMVDGYAKAGRLDNAREVFDNM 143
SYNS++ V + ++ + I MS V MV G KA +L +V M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 144 TE---RNAFS-WTSLISGYFRCGRTEEALQLFDQMSE----RSVVTWTTMVSGFAQNGLV 195
+ R AFS +T+LI + ++ L LF QM E +V +TT++ GFA+ G V
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 196 DHARRFFDLMP----EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVR----SWNVM 247
D A D M + + + + + S+ G+ +K F E+ ++ ++ M
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 248 ISGCLSANRVDEAIHLFETMPDRNHV----SWTAMVSGLAQNKMVEVARKYFDIMPFK-- 301
I ANR+DEA+ +FE + V ++ M+ G + A + K
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 302 --DMAAWSAMITAYVDEKLLGEALELFNLVPEK---NVGIWNTIIDGYVRNGEAGEALRL 356
+ A++ ++T + EAL++F + + N+ +N +ID R G+ A L
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFEL 399
Query: 357 FILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNT---WVTNALITLYSK 413
M ++ P V T+ ++ ++ +A AM + ++ T +LI K
Sbjct: 400 RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGK 459
Query: 414 SGDLCSAMLVFELLKSKDV----VSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEIT 469
G + A V+E + D + +T++I + NHG +++ M+ PD
Sbjct: 460 VGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQL 519
Query: 470 FVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTI 529
+ AG +GR +F+ IK A YS L+ L +AG NE ++ ++
Sbjct: 520 LNTYMDCMFKAGEPEKGRAMFEEIK-ARRFVPDARSYSILIHGLIKAGFANETYELFYSM 578
Query: 530 PPSEI---DEAVLVALLGACKLHGNIKVANSIGQKLLS--LEPTSSGGYVLLSNAYAAEE 584
A + + G CK G + A + +++ + EPT Y + + A +
Sbjct: 579 KEQGCVLDTRAYNIVIDGFCKC-GKVNKAYQLLEEMKTKGFEPTVV-TYGSVIDGLAKID 636
Query: 585 QWDE----FAQVRKRMKEKNV----KKISGFSQIQVKGKNHLFFVGERSHPQVEEIYGFL 636
+ DE F + + + E NV I GF ++ +++E Y L
Sbjct: 637 RLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVG----------------RIDEAYLIL 680
Query: 637 QQSLQPLMRETGYTPENSLL 656
++ +Q + YT NSLL
Sbjct: 681 EELMQKGLTPNLYT-WNSLL 699
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 113/509 (22%), Positives = 222/509 (43%), Gaps = 77/509 (15%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDAV----SYNSMIAVYLKNKDVHGAETIFKAMSE 114
N +T L + GK+ EA K+F+EM ++DA +YN +I + + + A + +M +
Sbjct: 347 NCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQK 405
Query: 115 R----DVVAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEE 166
+V + MVD K+ +LD A +F+ M + + ++ SLI G + GR ++
Sbjct: 406 AGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDD 465
Query: 167 ALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLD 222
A +++++M + + +T+++ F +G + + + M +N ++ +Y+D
Sbjct: 466 AYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMD 525
Query: 223 ----NGQFSEGYKLFLEMPER----NVRSWNVMISGCLSANRVDEAIHLFETMPDRNHV- 273
G+ +G +F E+ R + RS++++I G + A +E LF +M ++ V
Sbjct: 526 CMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVL 585
Query: 274 ---SWTAMVSGLAQNKMVEVARKYFDIMPFK----DMAAWSAMITAYVDEKLLGEALELF 326
++ ++ G + V A + + M K + + ++I L EA LF
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
Query: 327 NLVPEK----NVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGM 382
K NV I++++IDG+ + G EA + +
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI-------------------------L 680
Query: 383 VEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLK----SKDVVSWTAM 438
E+MQ G N + N+L+ K+ ++ A++ F+ +K + + V++ +
Sbjct: 681 EELMQK-------GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGIL 733
Query: 439 IVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYN 498
I + A + M G KP I++ ++S + AG + + +FD K
Sbjct: 734 INGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKA--- 790
Query: 499 LNLKVEHYSCLVDMLGRAGLVNEAMDVVS 527
N V +C M+ N AMD S
Sbjct: 791 -NGGVPDSACYNAMIEGLSNGNRAMDAFS 818
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 109/469 (23%), Positives = 211/469 (44%), Gaps = 53/469 (11%)
Query: 54 SLRKRNVEITILGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIF 109
+L N+ I +L R GKL A +L D M + + + N M+ K++ + A +F
Sbjct: 376 NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMF 435
Query: 110 KAMSER----DVVAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRC 161
+ M + D + +++DG K GR+D+A +V++ M + N+ +TSLI +F
Sbjct: 436 EEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNH 495
Query: 162 GRTEEALQLFDQMSERSVVT----WTTMVSGFAQNGLVDHARRFFDLMPEKNTI----AW 213
GR E+ +++ M ++ T + + G + R F+ + + + ++
Sbjct: 496 GRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSY 555
Query: 214 TAMVKSYLDNGQFSEGYKLFLEMPER----NVRSWNVMISGCLSANRVDEAIHLFETMPD 269
+ ++ + G +E Y+LF M E+ + R++N++I G +V++A L E M
Sbjct: 556 SILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKT 615
Query: 270 RNH----VSWTAMVSGLAQNKMVEVARKYFDIMPFK----DMAAWSAMITAY-----VDE 316
+ V++ +++ GLA+ ++ A F+ K ++ +S++I + +DE
Sbjct: 616 KGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDE 675
Query: 317 K-LLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSI 375
L+ E L L P N+ WN+++D V+ E EAL F M P T +
Sbjct: 676 AYLILEELMQKGLTP--NLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGIL 733
Query: 376 ITSCDGMVEIMQAHAMVI------HLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKS 429
I +G+ ++ + + + G + +T +I+ +K+G++ A +F+ K+
Sbjct: 734 I---NGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKA 790
Query: 430 K----DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLL 474
D + AMI +N A +F G T V LL
Sbjct: 791 NGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLL 839
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 122/555 (21%), Positives = 226/555 (40%), Gaps = 84/555 (15%)
Query: 48 SISHDWSLRKRNVEITILGRRGKLKEARKLFDEMP----QRDAVSYNSMIAVYLKNKDVH 103
S S D + NV I G+ GK+ A K F E+ + D V+Y SMI V K +
Sbjct: 231 SSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLD 290
Query: 104 GAETIFKAMSERDVV----AQSAMVDGYAKAGRLDNAREVFDNMTERNA----FSWTSLI 155
A +F+ + + V A + M+ GY AG+ D A + + + + ++ ++
Sbjct: 291 EAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCIL 350
Query: 156 SGYFRCGRTEEALQLFDQMSERS---VVTWTTMVSGFAQNGLVDHARRFFDLMPE----K 208
+ + G+ +EAL++F++M + + + T+ ++ + G +D A D M +
Sbjct: 351 TCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFP 410
Query: 209 NTIAWTAMVKSYLDNGQFSEGYKLFLEMPER----NVRSWNVMISGCLSANRVDEAIHLF 264
N MV + + E +F EM + + ++ +I G RVD+A ++
Sbjct: 411 NVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVY 470
Query: 265 ETMPDR----NHVSWTAMVSGLAQNKMVEVARK-------------------YFDIM--- 298
E M D N + +T+++ + E K Y D M
Sbjct: 471 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKA 530
Query: 299 --PFK---------------DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGI----W 337
P K D ++S +I + E ELF + E+ + +
Sbjct: 531 GEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 590
Query: 338 NTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEI--MQAHAMVIHL 395
N +IDG+ + G+ +A +L M F P V T S+I DG+ +I + M+
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVI---DGLAKIDRLDEAYMLFEE 647
Query: 396 G----FEQNTWVTNALITLYSKSGDLCSAMLVFELLKSK----DVVSWTAMIVAYANHGH 447
E N + ++LI + K G + A L+ E L K ++ +W +++ A
Sbjct: 648 AKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEE 707
Query: 448 GHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYS 507
+ AL F M P+++T+ L++ N+ + ++ + Y+
Sbjct: 708 INEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQ-KQGMKPSTISYT 766
Query: 508 CLVDMLGRAGLVNEA 522
++ L +AG + EA
Sbjct: 767 TMISGLAKAGNIAEA 781
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 121/520 (23%), Positives = 222/520 (42%), Gaps = 92/520 (17%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDA----VSYNSMIAVYLKNKDVHGAETIFKAMSE 114
N I LG G+ EA ++M +R ++Y+ ++ + K + A + K M++
Sbjct: 299 NTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTK 358
Query: 115 R----DVVAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEE 166
+ +V+ + ++D + +AG L+ A E+ D M + + ++ +LI GY + G+ +
Sbjct: 359 KGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADN 418
Query: 167 ALQLFDQM----------SERSVVTW-----------------------------TTMVS 187
A +L +M S SV+ TT++S
Sbjct: 419 AERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLIS 478
Query: 188 GFAQNGLVDHAR------RFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNV 241
G ++G H++ +F + +T A++ + G+ E +++ E+ R
Sbjct: 479 GLCKHG--KHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGC 536
Query: 242 R----SWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARK 293
S+N +ISGC ++DEA + M R ++ +++ ++ GL VE A +
Sbjct: 537 VMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ 596
Query: 294 YFD------IMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVG----IWNTIIDG 343
++D ++P D+ +S MI + E E F+ + KNV ++N +I
Sbjct: 597 FWDDCKRNGMLP--DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA 654
Query: 344 YVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHL---GFEQN 400
Y R+G AL L M P T TS+I + + +A + + G E N
Sbjct: 655 YCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714
Query: 401 TWVTNALITLYSKSGDLCSAMLVFELLKSKDV----VSWTAMIVAYANHGHGHHALQVFA 456
+ ALI Y K G + + + SK+V +++T MI YA G+ A ++
Sbjct: 715 VFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLN 774
Query: 457 RMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGA 496
M G PD IT+ + G + QG V ++ KG+
Sbjct: 775 EMREKGIVPDSITYKEFI-----YGYLKQG-GVLEAFKGS 808
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 109/501 (21%), Positives = 204/501 (40%), Gaps = 43/501 (8%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQ---RDAVSYNSMIAVYLKNKDVHGAETIFKAMSER 115
N+ +T L R + ++ + FD + + D + + I + K V A +F M E
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEA 289
Query: 116 ----DVVAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEA 167
+VV + ++DG GR D A + M ER +++ L+ G R R +A
Sbjct: 290 GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDA 349
Query: 168 LQLFDQMSER----SVVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKS 219
+ +M+++ +V+ + ++ F + G ++ A DLM K + + ++K
Sbjct: 350 YFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKG 409
Query: 220 YLDNGQFSEGYKLFLEMPE----RNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVS- 274
Y NGQ +L EM N S+ +I S D A+ M RN
Sbjct: 410 YCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPG 469
Query: 275 ---WTAMVSGLAQ----NKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFN 327
T ++SGL + +K +E+ ++ + D +A++ + L EA +
Sbjct: 470 GGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQK 529
Query: 328 LVPEKNVGI----WNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMV 383
+ + + +NT+I G + EA M++ +P T + +I M
Sbjct: 530 EILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMN 589
Query: 384 EIMQAHAM---VIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDV----VSWT 436
++ +A G + + + +I K+ F+ + SK+V V +
Sbjct: 590 KVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYN 649
Query: 437 AMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGA 496
+I AY G AL++ M G P+ T+ L+ S V + + +F+ ++
Sbjct: 650 HLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR-M 708
Query: 497 YNLNLKVEHYSCLVDMLGRAG 517
L V HY+ L+D G+ G
Sbjct: 709 EGLEPNVFHYTALIDGYGKLG 729
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 115/569 (20%), Positives = 238/569 (41%), Gaps = 49/569 (8%)
Query: 78 FDEMPQRDAVSYNSMIAVY---LKNKDVHGAETIFKAMSERDVVAQSA----MVDGYAKA 130
FDE +R + +I VY K + A +F ++ + + ++ +A
Sbjct: 182 FDEEIRRKMS--DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRA 239
Query: 131 GRLDNAREVFDNMTE---RNAFSWTSLISGYFRCGRTEEALQLFDQMSER----SVVTWT 183
E FD + + + + +T+ I+ + + G+ EEA++LF +M E +VVT+
Sbjct: 240 NEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFN 299
Query: 184 TMVSGFAQNGLVDHARRFFDLMPEKNT----IAWTAMVKSYLDNGQFSEGYKLFLEMPER 239
T++ G G D A F + M E+ I ++ +VK + + Y + EM ++
Sbjct: 300 TVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK 359
Query: 240 ----NVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVA 291
NV +N +I + A +++AI + + M + ++ ++ G +N + A
Sbjct: 360 GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA 419
Query: 292 RKYFDIM---PFK-DMAAWSAMITAYVDEKLLGEALELFNLVPEKNV----GIWNTIIDG 343
+ M F + +++++I + AL + +N+ G+ T+I G
Sbjct: 420 ERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISG 479
Query: 344 YVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITS-CDG--MVEIMQAHAMVIHLGFEQN 400
++G+ +AL L+ L F T +++ C+ + E + ++ G +
Sbjct: 480 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 539
Query: 401 TWVTNALITLYSKSGDLCSA-MLVFELLK---SKDVVSWTAMIVAYANHGHGHHALQVFA 456
N LI+ L A M + E++K D +++ +I N A+Q +
Sbjct: 540 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 599
Query: 457 RMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRA 516
+G PD T+ ++ C A +G+ FD + + N+ Y+ L+ R+
Sbjct: 600 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM-SKNVQPNTVVYNHLIRAYCRS 658
Query: 517 GLVNEAMDVVSTIPPSEI--DEAVLVALLGACKLHGNIKVANSIGQ--KLLSLEPTSSGG 572
G ++ A+++ + I + A +L+ + ++ A + + ++ LEP
Sbjct: 659 GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVF-H 717
Query: 573 YVLLSNAYAAEEQWDEFAQVRKRMKEKNV 601
Y L + Y Q + + + M KNV
Sbjct: 718 YTALIDGYGKLGQMVKVECLLREMHSKNV 746
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 27/203 (13%)
Query: 70 KLKEARKLFDEM----PQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSA--- 122
+ +E ++ FDEM Q + V YN +I Y ++ + A + + M + + SA
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 684
Query: 123 -MVDGYAKAGRLDNAREVFDNMT----ERNAFSWTSLISGYFRCGRTEEALQLFDQMSER 177
++ G + R++ A+ +F+ M E N F +T+LI GY + G+ + L +M +
Sbjct: 685 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 744
Query: 178 SV----VTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFSEG 229
+V +T+T M+ G+A++G V A R + M EK ++I + + YL G E
Sbjct: 745 NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Query: 230 YKLFLEMPERN----VRSWNVMI 248
+K E N + WN +I
Sbjct: 805 FK---GSDEENYAAIIEGWNKLI 824
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 121/520 (23%), Positives = 222/520 (42%), Gaps = 92/520 (17%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQRDA----VSYNSMIAVYLKNKDVHGAETIFKAMSE 114
N I LG G+ EA ++M +R ++Y+ ++ + K + A + K M++
Sbjct: 299 NTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTK 358
Query: 115 R----DVVAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEE 166
+ +V+ + ++D + +AG L+ A E+ D M + + ++ +LI GY + G+ +
Sbjct: 359 KGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADN 418
Query: 167 ALQLFDQM----------SERSVVTW-----------------------------TTMVS 187
A +L +M S SV+ TT++S
Sbjct: 419 AERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLIS 478
Query: 188 GFAQNGLVDHAR------RFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNV 241
G ++G H++ +F + +T A++ + G+ E +++ E+ R
Sbjct: 479 GLCKHG--KHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGC 536
Query: 242 R----SWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARK 293
S+N +ISGC ++DEA + M R ++ +++ ++ GL VE A +
Sbjct: 537 VMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ 596
Query: 294 YFD------IMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVG----IWNTIIDG 343
++D ++P D+ +S MI + E E F+ + KNV ++N +I
Sbjct: 597 FWDDCKRNGMLP--DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA 654
Query: 344 YVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHL---GFEQN 400
Y R+G AL L M P T TS+I + + +A + + G E N
Sbjct: 655 YCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714
Query: 401 TWVTNALITLYSKSGDLCSAMLVFELLKSKDV----VSWTAMIVAYANHGHGHHALQVFA 456
+ ALI Y K G + + + SK+V +++T MI YA G+ A ++
Sbjct: 715 VFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLN 774
Query: 457 RMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGA 496
M G PD IT+ + G + QG V ++ KG+
Sbjct: 775 EMREKGIVPDSITYKEFI-----YGYLKQG-GVLEAFKGS 808
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 109/501 (21%), Positives = 204/501 (40%), Gaps = 43/501 (8%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQ---RDAVSYNSMIAVYLKNKDVHGAETIFKAMSER 115
N+ +T L R + ++ + FD + + D + + I + K V A +F M E
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEA 289
Query: 116 ----DVVAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEA 167
+VV + ++DG GR D A + M ER +++ L+ G R R +A
Sbjct: 290 GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDA 349
Query: 168 LQLFDQMSER----SVVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKS 219
+ +M+++ +V+ + ++ F + G ++ A DLM K + + ++K
Sbjct: 350 YFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKG 409
Query: 220 YLDNGQFSEGYKLFLEMPE----RNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVS- 274
Y NGQ +L EM N S+ +I S D A+ M RN
Sbjct: 410 YCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPG 469
Query: 275 ---WTAMVSGLAQ----NKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFN 327
T ++SGL + +K +E+ ++ + D +A++ + L EA +
Sbjct: 470 GGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQK 529
Query: 328 LVPEKNVGI----WNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMV 383
+ + + +NT+I G + EA M++ +P T + +I M
Sbjct: 530 EILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMN 589
Query: 384 EIMQAHAM---VIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDV----VSWT 436
++ +A G + + + +I K+ F+ + SK+V V +
Sbjct: 590 KVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYN 649
Query: 437 AMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGA 496
+I AY G AL++ M G P+ T+ L+ S V + + +F+ ++
Sbjct: 650 HLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR-M 708
Query: 497 YNLNLKVEHYSCLVDMLGRAG 517
L V HY+ L+D G+ G
Sbjct: 709 EGLEPNVFHYTALIDGYGKLG 729
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 115/569 (20%), Positives = 238/569 (41%), Gaps = 49/569 (8%)
Query: 78 FDEMPQRDAVSYNSMIAVY---LKNKDVHGAETIFKAMSERDVVAQSA----MVDGYAKA 130
FDE +R + +I VY K + A +F ++ + + ++ +A
Sbjct: 182 FDEEIRRKMS--DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRA 239
Query: 131 GRLDNAREVFDNMTE---RNAFSWTSLISGYFRCGRTEEALQLFDQMSER----SVVTWT 183
E FD + + + + +T+ I+ + + G+ EEA++LF +M E +VVT+
Sbjct: 240 NEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFN 299
Query: 184 TMVSGFAQNGLVDHARRFFDLMPEKNT----IAWTAMVKSYLDNGQFSEGYKLFLEMPER 239
T++ G G D A F + M E+ I ++ +VK + + Y + EM ++
Sbjct: 300 TVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK 359
Query: 240 ----NVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVA 291
NV +N +I + A +++AI + + M + ++ ++ G +N + A
Sbjct: 360 GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA 419
Query: 292 RKYFDIM---PFK-DMAAWSAMITAYVDEKLLGEALELFNLVPEKNV----GIWNTIIDG 343
+ M F + +++++I + AL + +N+ G+ T+I G
Sbjct: 420 ERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISG 479
Query: 344 YVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITS-CDG--MVEIMQAHAMVIHLGFEQN 400
++G+ +AL L+ L F T +++ C+ + E + ++ G +
Sbjct: 480 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 539
Query: 401 TWVTNALITLYSKSGDLCSA-MLVFELLK---SKDVVSWTAMIVAYANHGHGHHALQVFA 456
N LI+ L A M + E++K D +++ +I N A+Q +
Sbjct: 540 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 599
Query: 457 RMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRA 516
+G PD T+ ++ C A +G+ FD + + N+ Y+ L+ R+
Sbjct: 600 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM-SKNVQPNTVVYNHLIRAYCRS 658
Query: 517 GLVNEAMDVVSTIPPSEI--DEAVLVALLGACKLHGNIKVANSIGQ--KLLSLEPTSSGG 572
G ++ A+++ + I + A +L+ + ++ A + + ++ LEP
Sbjct: 659 GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVF-H 717
Query: 573 YVLLSNAYAAEEQWDEFAQVRKRMKEKNV 601
Y L + Y Q + + + M KNV
Sbjct: 718 YTALIDGYGKLGQMVKVECLLREMHSKNV 746
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 27/203 (13%)
Query: 70 KLKEARKLFDEM----PQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQSA--- 122
+ +E ++ FDEM Q + V YN +I Y ++ + A + + M + + SA
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 684
Query: 123 -MVDGYAKAGRLDNAREVFDNMT----ERNAFSWTSLISGYFRCGRTEEALQLFDQMSER 177
++ G + R++ A+ +F+ M E N F +T+LI GY + G+ + L +M +
Sbjct: 685 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 744
Query: 178 SV----VTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFSEG 229
+V +T+T M+ G+A++G V A R + M EK ++I + + YL G E
Sbjct: 745 NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Query: 230 YKLFLEMPERN----VRSWNVMI 248
+K E N + WN +I
Sbjct: 805 FK---GSDEENYAAIIEGWNKLI 824
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 206/463 (44%), Gaps = 53/463 (11%)
Query: 67 RRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAM----SERDVV 118
+ G L KLF + + D V ++S I VY+K+ D+ A ++K M +VV
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVV 392
Query: 119 AQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQLFDQM 174
+ ++ G + GR+ A ++ + +R + +++SLI G+ +CG L++ M
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 175 SE----RSVVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQF 226
+ VV + +V G ++ GL+ HA RF M + N + + +++ + +F
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 227 SEGYKLFLEMP----ERNVRSWNVMISGCLSANRVDEAIHLFETM------PDRNHVSWT 276
E K+F M + +V ++ ++ + R++EA+ LF M PD +++
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPD--ALAYC 570
Query: 277 AMVSGLAQNKMVEVARKYFDIMPFK----DMAAWSAMITAYVDEKLLGEALELFN-LVP- 330
++ ++ + + FD+M D+A + +I + +A + FN L+
Sbjct: 571 TLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG 630
Query: 331 --EKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSII------TSCDGM 382
E ++ +NT+I GY EA R+F L+ + F P T+T +I DG
Sbjct: 631 KMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGA 690
Query: 383 VEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSK----DVVSWTAM 438
+ + A G + N L+ +SKS D+ + +FE ++ K +VS++ +
Sbjct: 691 IRMFSIMA---EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSII 747
Query: 439 IVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAG 481
I G A +F + + + PD + + L+ G
Sbjct: 748 IDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVG 790
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 111/516 (21%), Positives = 231/516 (44%), Gaps = 47/516 (9%)
Query: 77 LFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSER----DVVAQSAMVDGYAKAGR 132
+ D P + V++ ++I + K ++ A +FK M +R D++A S ++DGY KAG
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 133 LDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQLFDQM----SERSVVTWTT 184
L ++F + + ++S I Y + G A ++ +M +VVT+T
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 185 MVSGFAQNGLVDHARRFFDLM----PEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPE-- 238
++ G Q+G + A + + E + + +++++ + G G+ L+ +M +
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 239 --RNVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVAR 292
+V + V++ G + A+ M + N V + +++ G + + A
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 293 KYFDIMPF----KDMAAWSAMITAYVDEKLLGEAL----ELFNLVPEKNVGIWNTIIDGY 344
K F +M D+A ++ ++ + E L EAL +F + E + + T+ID +
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAF 576
Query: 345 VRNGEAGEALRLFILMLRSCFRPCVTTMTSIIT---SCDGMVEIMQAHAMVIHLGFEQNT 401
++ + L+LF LM R+ + +I C + + + +I E +
Sbjct: 577 CKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDI 636
Query: 402 WVTNALITLYSKSGDLCSAMLVFELLK----SKDVVSWTAMIVAYANHGHGHHALQVFAR 457
N +I Y L A +FELLK + V+ T +I + A+++F+
Sbjct: 637 VTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSI 696
Query: 458 MVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAG 517
M G+KP+ +T+ L+ S + + ++F+ ++ ++ + YS ++D L + G
Sbjct: 697 MAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ-EKGISPSIVSYSIIIDGLCKRG 755
Query: 518 LVNEAMDVV-----STIPPSEIDEAVLVALLGACKL 548
V+EA ++ + + P + A+L+ G CK+
Sbjct: 756 RVDEATNIFHQAIDAKLLPDVVAYAILIR--GYCKV 789
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 94/475 (19%), Positives = 180/475 (37%), Gaps = 76/475 (16%)
Query: 64 ILGRRGKLKEARKLFDEMPQRDAVSYNSMIAVYLKNKD----------------VHGAET 107
+L R G A K+FDEM +N + ++ ++ D V A
Sbjct: 108 VLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYGMVDKALE 167
Query: 108 IFKAMSERDVVAQS----AMVDGYAKAGRLDNAREVFDNMT----ERNAFSWTSLISGYF 159
IF ++ VV M++ + R+D + FD + E + S +
Sbjct: 168 IFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDAL 227
Query: 160 RC-GRTEEALQLFDQMSER----SVVTWTTMVSGFAQNGLVDHARRFFDLM----PEKNT 210
C G +AL + ER +V+ ++ G + + ++ A R L+ P N
Sbjct: 228 FCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQ-IEVASRLLSLVLDCGPAPNV 286
Query: 211 IAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDR 270
+ + ++ + G+ + LF M +R + PD
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIE-------------------------PDL 321
Query: 271 NHVSWTAMVSGLAQNKMVEVARKYFDIMPFK----DMAAWSAMITAYVDEKLLGEALELF 326
++++ ++ G + M+ + K F K D+ +S+ I YV L A ++
Sbjct: 322 --IAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVY 379
Query: 327 NLV----PEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSII---TSC 379
+ NV + +I G ++G EA ++ +L+ P + T +S+I C
Sbjct: 380 KRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKC 439
Query: 380 DGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAM-LVFELLKSK---DVVSW 435
+ + +I +G+ + + L+ SK G + AM ++L +VV +
Sbjct: 440 GNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVF 499
Query: 436 TAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVF 490
++I + AL+VF M G KPD TF ++ G + + +F
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF 554
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 105/461 (22%), Positives = 200/461 (43%), Gaps = 53/461 (11%)
Query: 88 SYNSMIAVYLKNKDVHGAETIFKAMSE----RDVVAQSAMVDGYAKAGRLDNAREVFDNM 143
+YN MI + + A I M + +V +++++G+ R+ A + D M
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 144 TE----RNAFSWTSLISGYFRCGRTEEALQLFDQM----SERSVVTWTTMVSGFAQNGLV 195
E + ++T+L+ G F+ + EA+ L ++M + +VT+ +++G + G
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 196 DHARRFFDLMP----EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVR----SWNVM 247
D A + M E + + ++ ++ S + LF EM + +R +++ +
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 248 ISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIMPFK-- 301
IS + R +A L M +R N V++ +++ A+ + A K FD M +
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 302 --DMAAWSAMITAYVDEKLLGEALELFNLVPEKN----VGIWNTIIDGYVRNGEAGEALR 355
++ ++++I + L EA ++F L+ K+ V +NT+I+G+ + + + +
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 356 LFILMLRSCFRPCVTTMTSII------TSCDGMVEIMQAHAMVIHLGFEQNTWVTNALIT 409
LF M R T T++I + CD + + ++ G N N L+
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ---MVSDGVHPNIMTYNTLLD 458
Query: 410 LYSKSGDLCSAMLVFELL-KSK---DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKP 465
K+G L AM+VFE L KSK D+ ++ M G +F + G KP
Sbjct: 459 GLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKP 518
Query: 466 DEITFVGLLSACSHAGLVNQGRRVFDSIK--------GAYN 498
D I + ++S GL + +F +K G YN
Sbjct: 519 DVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYN 559
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 156/332 (46%), Gaps = 41/332 (12%)
Query: 71 LKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSER----DVVAQSA 122
+ +A LF EM + D +Y+S+I+ A + M ER +VV ++
Sbjct: 256 VDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNS 315
Query: 123 MVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQLFDQMSER- 177
++D +AK G+L A ++FD M +R N ++ SLI+G+ R +EA Q+F M +
Sbjct: 316 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 375
Query: 178 ---SVVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFSEGY 230
VVT+ T+++GF + V F M + NT+ +T ++ +
Sbjct: 376 CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQ 435
Query: 231 KLFLEMPER----NVRSWNVMISGCLSANRVDEAIHLFETM------PDRNHVSWTAMVS 280
+F +M N+ ++N ++ G ++++A+ +FE + PD ++ M
Sbjct: 436 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDI--YTYNIMSE 493
Query: 281 GLAQNKMVEVARKYFDIMPFK----DMAAWSAMITAYVDEKLLGEALELFNLV----PEK 332
G+ + VE F + K D+ A++ MI+ + + L EA LF + P
Sbjct: 494 GMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLP 553
Query: 333 NVGIWNTIIDGYVRNGEAGEALRLFILMLRSC 364
+ G +NT+I ++R+G+ + L I +RSC
Sbjct: 554 DSGTYNTLIRAHLRDGDKAASAEL-IKEMRSC 584
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 118/235 (50%), Gaps = 24/235 (10%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSE 114
N I + GKL EA KLFDEM QR + V+YNS+I + + + A+ IF M
Sbjct: 314 NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 373
Query: 115 R----DVVAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEE 166
+ DVV + +++G+ KA ++ + E+F +M+ R N ++T+LI G+F+ +
Sbjct: 374 KDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDN 433
Query: 167 ALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHARRFFDLMP----EKNTIAWTAMVK 218
A +F QM V +T+ T++ G +NG ++ A F+ + E + + M +
Sbjct: 434 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSE 493
Query: 219 SYLDNGQFSEGYKLFLEMPERNVR----SWNVMISGCLSANRVDEAIHLFETMPD 269
G+ +G+ LF + + V+ ++N MISG +EA LF M +
Sbjct: 494 GMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE 548
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 111/502 (22%), Positives = 209/502 (41%), Gaps = 45/502 (8%)
Query: 163 RTEEALQLFDQMSER----SVVTWTTMVSGFAQNGLVDHARRFFDLMP----EKNTIAWT 214
+ +EA+ LF +M + S+V ++ ++S A+ D F + M N +
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 215 AMVKSYLDNGQFSEGYKLFLEMPE----RNVRSWNVMISGCLSANRVDEAIHLFETMPDR 270
M+ Q S + +M + ++ + N +++G NR+ EA+ L + M +
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 271 NH----VSWTAMVSGLAQNKMVEVARKYFDIMPFK----DMAAWSAMITAYVDEKLLGEA 322
+ V++T +V GL Q+ A + M K D+ + A+I A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 323 LELFNLVP----EKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITS 378
L L N + E +V I++T+ID + +AL LF M RP V T +S+I+
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 379 CDGMVEIMQAHAMV---IHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSK----D 431
A ++ + N N+LI ++K G L A +F+ + + +
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 432 VVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFD 491
+V++ ++I + H A Q+F MV+ PD +T+ L++ A V G +F
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 492 SIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVL---VALLGACKL 548
+ L Y+ L+ +A + A V + + ++ L G CK
Sbjct: 405 DM-SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK- 462
Query: 549 HGNIKVANSIGQKLL--SLEPTSSGGYVL---LSNAYAAEEQWDEFAQVRKRMKEKNV-- 601
+G ++ A + + L +EP ++ + A E+ WD F + + + +V
Sbjct: 463 NGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIA 522
Query: 602 --KKISGFSQIQVKGKNHLFFV 621
ISGF + +K + + F+
Sbjct: 523 YNTMISGFCKKGLKEEAYTLFI 544
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 183/401 (45%), Gaps = 41/401 (10%)
Query: 69 GKLKEARKLFDEM----PQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSER----DVVAQ 120
GK+ EA L D M Q D V+YNS++ ++ D A + + M ER DV
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231
Query: 121 SAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQLFDQMSE 176
S ++D + G +D A +F M + + ++ SL+ G + G+ + L M
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
Query: 177 R----SVVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFSE 228
R +V+T+ ++ F + G + A + M + N I + ++ Y + SE
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351
Query: 229 GYKLFLEMPERN-----VRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMV 279
+ L++ RN + ++ +I G RVD+ + +F + R N V+++ +V
Sbjct: 352 ANNM-LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Query: 280 SGLAQNKMVEVARKYFDIM----PFKDMAAWSAMITAYVDEKLLGEALELF-NLVPEK-N 333
G Q+ +++A + F M D+ + ++ D L +ALE+F +L K +
Sbjct: 411 QGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 470
Query: 334 VGI--WNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAM 391
+GI + TII+G + G+ +A LF + +P V T T +I+ + +A+ +
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 530
Query: 392 VIHL---GFEQNTWVTNALITLYSKSGDLCSAMLVFELLKS 429
+ + G N N LI + + GDL ++ + E +KS
Sbjct: 531 LRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/463 (22%), Positives = 205/463 (44%), Gaps = 69/463 (14%)
Query: 133 LDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMS----ERSVVTWTTMVSG 188
LD +++ N N ++ +I+ + RC +T A + ++ E T+ T++ G
Sbjct: 108 LDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKG 167
Query: 189 FAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVR-- 242
G V A D M E + + + ++V +G S L +M ERNV+
Sbjct: 168 LFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 227
Query: 243 --SWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFD 296
+++ +I +D AI LF+ M + + V++ ++V GL + A K+ D
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK------AGKWND 281
Query: 297 -IMPFKDMAA---------WSAMITAYVDEKLLGEALELFNLVPEK----NVGIWNTIID 342
+ KDM + ++ ++ +V E L EA EL+ + + N+ +NT++D
Sbjct: 282 GALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 341
Query: 343 GYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTW 402
GY EA + LM+R+ P + T TS+I + + MV + +
Sbjct: 342 GYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI----------KGYCMVKRVDDGMKVF 391
Query: 403 VTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSG 462
SK G + +A V+++ ++ + G A ++F MV+ G
Sbjct: 392 RN------ISKRGLVANA------------VTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 463 TKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEA 522
PD +T+ LL G + + +F+ ++ + ++L + Y+ +++ + + G V +A
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS-KMDLGIVMYTTIIEGMCKGGKVEDA 492
Query: 523 MDVVSTIPPSEIDEAVL---VALLGACKLHGNIKVANSIGQKL 562
++ ++P + V+ V + G CK G++ AN + +K+
Sbjct: 493 WNLFCSLPCKGVKPNVMTYTVMISGLCK-KGSLSEANILLRKM 534
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 135/285 (47%), Gaps = 28/285 (9%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAM-- 112
NV + + + GKL+EA +L+ EM R + ++YN+++ Y + A + M
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Query: 113 --SERDVVAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEE 166
D+V ++++ GY R+D+ +VF N+++R NA +++ L+ G+ + G+ +
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL 421
Query: 167 ALQLFDQMSERSVV----TWTTMVSGFAQNGLVDHARRFF-DLMPEK---NTIAWTAMVK 218
A +LF +M V+ T+ ++ G NG ++ A F DL K + +T +++
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 219 SYLDNGQFSEGYKLFLEMPER----NVRSWNVMISGCLSANRVDEAIHLFETMPDR---- 270
G+ + + LF +P + NV ++ VMISG + EA L M +
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541
Query: 271 NHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVD 315
N ++ ++ ++ + + K + M +A ++ I +D
Sbjct: 542 NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 175/400 (43%), Gaps = 38/400 (9%)
Query: 131 GRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQLFDQMSERSVV----TW 182
G ++ A VFD M+ R ++ S+ ++ G FR G+ +EA + M +R + T
Sbjct: 196 GLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATC 255
Query: 183 TTMVSGFAQNGLVDHA----RRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPE 238
T +++ +NGLV+ A R+ DL + N I +T+++ G + +++ EM
Sbjct: 256 TLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVR 315
Query: 239 R----NVRSWNVMISGCLSANRVDEAIHLF------ETMPDRNHVSWTAMVSGLAQNKMV 288
NV + +I G ++A LF +T H ++T+M+ G + +
Sbjct: 316 NGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVH-TYTSMIGGYCKEDKL 374
Query: 289 EVARKYFDIMP----FKDMAAWSAMITAYVDEKLLGEALELFNLVPEK----NVGIWNTI 340
A F M F ++ ++ +I + G A EL NL+ ++ N+ +N
Sbjct: 375 NRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAA 434
Query: 341 IDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHL---GF 397
ID + A EA L T T +I +I QA A + GF
Sbjct: 435 IDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGF 494
Query: 398 EQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVV----SWTAMIVAYANHGHGHHALQ 453
E + + N LI + + + + +F+L+ S ++ ++T+MI Y G AL+
Sbjct: 495 EADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALK 554
Query: 454 VFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSI 493
F M G PD T+ L+S +V++ ++++++
Sbjct: 555 YFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAM 594
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 119/267 (44%), Gaps = 37/267 (13%)
Query: 65 LGRRGKLKEARKLFDEMPQRDAV-----SYNSMIAVYLKNKDVHGAETIFKAMSER---- 115
L +RG ++A +LF ++ + D +Y SMI Y K ++ AE +F M E+
Sbjct: 332 LCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFP 391
Query: 116 DVVAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQLF 171
+V + +++G+ KAG A E+ + M + N +++ + I + R EA +L
Sbjct: 392 NVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELL 451
Query: 172 DQMS----ERSVVTWTTMVSGFAQNGLVDHARRFFDLMP----EKNTIAWTAMVKSYLDN 223
++ E VT+T ++ + ++ A FF M E + ++ ++
Sbjct: 452 NKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQ 511
Query: 224 GQFSEGYKLFL------EMPERNVRSWNVMISGCLSANRVDEAIHLFETM------PDRN 271
+ E +LF +P + ++ MIS +D A+ F M PD
Sbjct: 512 KKMKESERLFQLVVSLGLIPTK--ETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPD-- 567
Query: 272 HVSWTAMVSGLAQNKMVEVARKYFDIM 298
++ +++SGL + MV+ A K ++ M
Sbjct: 568 SFTYGSLISGLCKKSMVDEACKLYEAM 594
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 137/268 (51%), Gaps = 28/268 (10%)
Query: 71 LKEARKLFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSER----DVVAQSAMVDG 126
L+ +++ D + V+Y+S+I K+ + AE M + +V+ SA++D
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 127 YAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQLFDQMSER----S 178
YAK G+L V+ M + N F+++SLI G R +EA+++ D M + +
Sbjct: 128 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 187
Query: 179 VVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFSEGYKLFL 234
VVT++T+ +GF ++ VD + D MP++ NT++ ++K Y G+ +F
Sbjct: 188 VVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFG 247
Query: 235 EMPER----NVRSWNVMISGCLSANRVDEAIHLFETMP----DRNHVSWTAMVSGLAQNK 286
M N+RS+N++++G + V++A+ FE M D + +++T M+ G+ +
Sbjct: 248 YMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKAC 307
Query: 287 MVEVARKYFDIMPFK----DMAAWSAMI 310
MV+ A F + FK D A++ MI
Sbjct: 308 MVKEAYDLFYKLKFKRVEPDFKAYTIMI 335
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 156/316 (49%), Gaps = 32/316 (10%)
Query: 114 ERDVVAQSAMVDGYAKAGRLDNAREVFDNM----TERNAFSWTSLISGYFRCGRTEEALQ 169
E D+V S++V+G+ + + +A V M +R+ T LI + AL+
Sbjct: 10 EPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALE 69
Query: 170 LFDQMSER----SVVTWTTMVSGFAQNG-LVDHARRFFDLMPEK---NTIAWTAMVKSYL 221
+ +M +R +VVT++++++G ++G L D RR ++ +K N I ++A++ +Y
Sbjct: 70 VLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYA 129
Query: 222 DNGQFSE---GYKLFLEMP-ERNVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHV 273
G+ S+ YK+ ++M + NV +++ +I G NRVDEAI + + M + N V
Sbjct: 130 KRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVV 189
Query: 274 SWTAMVSGLAQNKMVEVARKYFDIMPFKDMAA----WSAMITAYVDEKLLGEALELF--- 326
+++ + +G ++ V+ K D MP + +AA + +I Y + AL +F
Sbjct: 190 TYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYM 249
Query: 327 ---NLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMV 383
L+P N+ +N ++ G NGE +AL F M ++ + T T +I
Sbjct: 250 TSNGLIP--NIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKAC 307
Query: 384 EIMQAHAMVIHLGFEQ 399
+ +A+ + L F++
Sbjct: 308 MVKEAYDLFYKLKFKR 323
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 160/331 (48%), Gaps = 56/331 (16%)
Query: 62 ITILGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSER-- 115
I+ L G+ +A +L +M ++ + V++N++I ++K AE ++ M +R
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 116 --DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAF----SWTSLISGYFRCGRTEEALQ 169
D+ +++V+G+ RLD A+++F+ M ++ F ++ +LI G+ + R E+ +
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 170 LFDQMSERSVV----TWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYL 221
LF +MS R +V T+TT++ G +G D+A++ F M + + ++ ++
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481
Query: 222 DNGQFSEGYKLFLEMPERNVR----SWNVMISGCLSANRVDEAIHLFETMPDR----NHV 273
+NG+ + ++F M + ++ + MI G A +VD+ LF ++ + N V
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541
Query: 274 SWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKN 333
++ M+SGL ++++ AY K + E P N
Sbjct: 542 TYNTMISGLCSKRLLQ---------------------EAYALLKKMKED------GPLPN 574
Query: 334 VGIWNTIIDGYVRNGEAGEALRLFILMLRSC 364
G +NT+I ++R+G+ + L I +RSC
Sbjct: 575 SGTYNTLIRAHLRDGDKAASAEL-IREMRSC 604
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 97/461 (21%), Positives = 195/461 (42%), Gaps = 53/461 (11%)
Query: 88 SYNSMIAVYLKNKDVHGAETIFKAMS----ERDVVAQSAMVDGYAKAGRLDNAREVFDNM 143
+YN +I + + + A + M E +V S++++GY R+ +A + D M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 144 TER----NAFSWTSLISGYFRCGRTEEALQLFDQMSER----SVVTWTTMVSGFAQNGLV 195
E + ++T+LI G F + EA+ L D+M +R ++VT+ +V+G + G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 196 DHARRFFDLMP----EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVR----SWNVM 247
D A + M E + + + ++ S + LF EM + +R +++ +
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 248 ISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLA-QNKMVEVARKYFDIMPFK- 301
IS S R +A L M ++ N V++ A++ + K VE + Y D++
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 302 --DMAAWSAMITAYVDEKLLGEALELFNLVPEKN----VGIWNTIIDGYVRNGEAGEALR 355
D+ +++++ + L +A ++F + K+ V +NT+I G+ ++ +
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 356 LFILMLRSCFRPCVTTMTSIIT------SCDGMVEIMQAHAMVIHLGFEQNTWVTNALIT 409
LF M T T++I CD ++ + ++ G + + L+
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ---MVSDGVPPDIMTYSILLD 478
Query: 410 LYSKSGDLCSAMLVFELLKSK----DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKP 465
+G L A+ VF+ ++ D+ +T MI G +F + G KP
Sbjct: 479 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 538
Query: 466 DEITFVGLLSACSHAGLVNQGRRVFDSIK--------GAYN 498
+ +T+ ++S L+ + + +K G YN
Sbjct: 539 NVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYN 579
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 192/412 (46%), Gaps = 32/412 (7%)
Query: 149 FSWTSLISGYFRCGRTEEALQLFDQMS----ERSVVTWTTMVSGFAQNGLVDHARRFFDL 204
+++ LI+ + R + AL L +M E S+VT +++++G+ + A D
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 205 MPE----KNTIAWTAMVKSYLDNGQFSEGYKLFLEMPER----NVRSWNVMISGCLSANR 256
M E +TI +T ++ + + SE L M +R N+ ++ V+++G
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 257 VDEAIHLFETMP----DRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFK----DMAAWSA 308
D A++L M + + V + ++ L + + V+ A F M K ++ +S+
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 309 MITAYVDEKLLGEALELFNLVPEK----NVGIWNTIIDGYVRNGEAGEALRLFILMLRSC 364
+I+ +A +L + + EK N+ +N +ID +V+ G+ EA +L+ M++
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 365 FRPCVTTMTSIITS-C--DGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAM 421
P + T S++ C D + + Q ++ + N LI + KS +
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 422 LVFELLKSK----DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSAC 477
+F + + D V++T +I + G +A +VF +MV+ G PD +T+ LL
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Query: 478 SHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTI 529
+ G + + VFD ++ + + L + Y+ +++ + +AG V++ D+ ++
Sbjct: 481 CNNGKLEKALEVFDYMQKS-EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 531
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 129/579 (22%), Positives = 234/579 (40%), Gaps = 89/579 (15%)
Query: 85 DAVSYNSMIAVYLKNKDVHGAETIFKAMSERDVVAQ----SAMVDGYAKAGRLDNAREVF 140
D ++N +I + + A + + M +V + ++ GY + G LD A +
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 141 DNMTERNAFSWTS-----LISGYFRCGRTEEALQLFDQMSERS-----VVTWTTMVSGFA 190
+ M E SW++ ++ G+ + GR E+AL +MS + T+ T+V+G
Sbjct: 248 EQMVEFGC-SWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 191 QNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRSWNVMISG 250
+ G V HA D+M EGY + +V ++N +ISG
Sbjct: 307 KAGHVKHAIEIMDVM--------------------LQEGY-------DPDVYTYNSVISG 339
Query: 251 CLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIMPFK----D 302
V EA+ + + M R N V++ ++S L + VE A + ++ K D
Sbjct: 340 LCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399
Query: 303 MAAWSAMITAYVDEKLLGEALELFNLVPEKNVG----IWNTIIDGYVRNGEAGEALRLFI 358
+ ++++I + A+ELF + K +N +ID G+ EAL +
Sbjct: 400 VCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLK 459
Query: 359 LM-LRSCFRPCVTTMTSIITSCDG--------MVEIMQAHAMVIHLGFEQNTWVTNALIT 409
M L C R +T T I C + + M+ H G +N+ N LI
Sbjct: 460 QMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVH------GVSRNSVTYNTLID 513
Query: 410 LYSKSGDLCSAMLVFELL----KSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKP 465
KS + A + + + + D ++ +++ + G A + M ++G +P
Sbjct: 514 GLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEP 573
Query: 466 DEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDV 525
D +T+ L+S AG V ++ SI+ +NL Y+ ++ L R EA+++
Sbjct: 574 DIVTYGTLISGLCKAGRVEVASKLLRSIQ-MKGINLTPHAYNPVIQGLFRKRKTTEAINL 632
Query: 526 VSTI------PPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLS--LEPTSSGGYVLLS 577
+ PP + + + G C G I+ A +LL P S Y+L
Sbjct: 633 FREMLEQNEAPPDAV--SYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAE 690
Query: 578 N--AYAAEEQWDEFAQV---RKRMKEKNVKKISGFSQIQ 611
+ EE + + + R E+ V + G +I+
Sbjct: 691 GLLTLSMEETLVKLVNMVMQKARFSEEEVSMVKGLLKIR 729
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 160/360 (44%), Gaps = 48/360 (13%)
Query: 51 HDWSLRKRNVEITILGRRGKLKEARKLFDEMPQRDA----VSYNSMIAVYLKNKDVHGAE 106
+D + N I+ L + G++KEA ++ D+M RD V+YN++I+ K V A
Sbjct: 326 YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEAT 385
Query: 107 TIFKAMSER----DVVAQSAMVDGYAKAGRLDNAREVFDNM----TERNAFSWTSLISGY 158
+ + ++ + DV ++++ G A E+F+ M E + F++ LI
Sbjct: 386 ELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSL 445
Query: 159 FRCGRTEEALQLFDQMS----ERSVVTWTTMVSGFAQNGLVDHARRFFDLMP----EKNT 210
G+ +EAL + QM RSV+T+ T++ GF + A FD M +N+
Sbjct: 446 CSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNS 505
Query: 211 IAWTAMVKSYLDNGQFSEGYKLFLEM------PERNVRSWNVMISGCLSANRVDEAIHLF 264
+ + ++ + + + +L +M P++ ++N +++ + +A +
Sbjct: 506 VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK--YTYNSLLTHFCRGGDIKKAADIV 563
Query: 265 ETMP----DRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMA----AWSAMITAYVDE 316
+ M + + V++ ++SGL + VEVA K + K + A++ +I +
Sbjct: 564 QAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRK 623
Query: 317 KLLGEALELFNLVPEKNVG---------IWNTIIDGYVRNGEAGEALRLFILMLRSCFRP 367
+ EA+ LF + E+N ++ + +G G EA+ + +L F P
Sbjct: 624 RKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNG---GGPIREAVDFLVELLEKGFVP 680
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/425 (20%), Positives = 179/425 (42%), Gaps = 53/425 (12%)
Query: 128 AKAGRLDNAREVFDNMTERNAFSWTS----LISGYFRCGRTEEALQLFDQMSERSVVTWT 183
++G D+ +++ ++M TS LI Y + +E L SVV W
Sbjct: 94 GRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEIL---------SVVDW- 143
Query: 184 TMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVRS 243
M+ F R +L+ + N++ + + K+ + + +V +
Sbjct: 144 -MIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHA-----------KMSVWGIKPDVST 191
Query: 244 WNVMISGCLSANRVDEAIHLFETMPDRNHV----SWTAMVSGLAQNKMVEVARKYFDIMP 299
+NV+I A+++ AI + E MP V ++T ++ G + ++ A + + M
Sbjct: 192 FNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM- 250
Query: 300 FKDMAAWS-----AMITAYVDEKLLGEALELFN-------LVPEKNVGIWNTIIDGYVRN 347
+ +WS ++ + E + +AL P++ +NT+++G +
Sbjct: 251 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT--FNTLVNGLCKA 308
Query: 348 GEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMV---IHLGFEQNTWVT 404
G A+ + +ML+ + P V T S+I+ + E+ +A ++ I NT
Sbjct: 309 GHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTY 368
Query: 405 NALITLYSKSGDLCSAMLVFELLKSK----DVVSWTAMIVAYANHGHGHHALQVFARMVT 460
N LI+ K + A + +L SK DV ++ ++I + A+++F M +
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRS 428
Query: 461 SGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVN 520
G +PDE T+ L+ + G +++ + ++ + V Y+ L+D +A
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS-GCARSVITYNTLIDGFCKANKTR 487
Query: 521 EAMDV 525
EA ++
Sbjct: 488 EAEEI 492
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/463 (22%), Positives = 199/463 (42%), Gaps = 71/463 (15%)
Query: 85 DAVSYNSMIAVYLKNKDVHGAETIFKAMS----ERDVVAQSAMVDGYAKAGRLDNAREVF 140
D +Y+ I + + + A + M E D+V S++++GY + R+ +A +
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 141 DNMTER----NAFSWTSLISGYFRCGRTEEALQLFDQMSER----SVVTWTTMVSGFAQN 192
D M E + F++T+LI G F + EA+ L DQM +R +VT+ T+V+G +
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 193 GLVD--------------------------------HARRFFDLMPE-------KNTIAW 213
G +D H DL E N + +
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 214 TAMVKSYLDNGQFSEGYKLFLEMPER----NVRSWNVMISGCLSANRVDEAIHLFETMPD 269
+++ + G++S+ +L M E+ NV ++N +I ++ EA L E M
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 270 R----NHVSWTAMVSGLAQNKMVEVARKYFDIMPFKD----MAAWSAMITAYVDEKLLGE 321
R + +++ +++G + ++ A++ F M KD + ++ +I + K + +
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416
Query: 322 ALELFNLVPEK----NVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIIT 377
+ELF + ++ N + TII G+ + G+ A +F M+ + + T + ++
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476
Query: 378 SCDGMVEIMQAHAMVIHLG---FEQNTWVTNALITLYSKSGDLCSAMLVFELLKSK-DVV 433
++ A + +L E N ++ N +I K+G + A +F L K DVV
Sbjct: 477 GLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVV 536
Query: 434 SWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSA 476
++ MI + A +F +M GT P+ T+ L+ A
Sbjct: 537 TYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 188/428 (43%), Gaps = 63/428 (14%)
Query: 65 LGRRGKLKEARKLFDEMP----QRDAVSYNSMIAVYLKNKDVHGAETIFKAMSER----D 116
L +RG + A L ++M + + V +N++I K + V A +F M + +
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Query: 117 VVAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQLFD 172
VV +++++ GR +A + NM E+ N ++ +LI +F+ G+ EA +L +
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHE 352
Query: 173 QMSERSV----VTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSE 228
+M +RS+ +T+ +++GF + +D A++ F M K+ +
Sbjct: 353 EMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLP---------------- 396
Query: 229 GYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQ 284
N++++N +I+G RV++ + LF M R N V++T ++ G Q
Sbjct: 397 -----------NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQ 445
Query: 285 NKMVEVARKYFDIM-----PFKDMAAWSAMITAYVDEKLLGEALELFNLVP----EKNVG 335
+ A+ F M P D+ +S ++ L AL +F + E N+
Sbjct: 446 AGDCDSAQMVFKQMVSNRVP-TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIF 504
Query: 336 IWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHL 395
I+NT+I+G + G+ GEA LF + +P V T ++I+ + +A + +
Sbjct: 505 IYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKM 561
Query: 396 ---GFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHAL 452
G N+ N LI + D ++ + + ++S V + I N H
Sbjct: 562 KEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGRLD 621
Query: 453 QVFARMVT 460
+ F M++
Sbjct: 622 KSFLNMLS 629
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 134/269 (49%), Gaps = 33/269 (12%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSE 114
N I L G+ +A +L M ++ + V++N++I + K + AE + + M +
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 115 R----DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAF----SWTSLISGYFRCGRTEE 166
R D + + +++G+ RLD A+++F M ++ ++ +LI+G+ +C R E+
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416
Query: 167 ALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLD 222
++LF +MS+R + VT+TT++ GF Q G D A+ F M N + M S L
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS-NRVPTDIMTYSILL 475
Query: 223 NGQFSEG----------YKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM---PD 269
+G S G Y EM E N+ +N MI G A +V EA LF ++ PD
Sbjct: 476 HGLCSYGKLDTALVIFKYLQKSEM-ELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPD 534
Query: 270 RNHVSWTAMVSGLAQNKMVEVARKYFDIM 298
V++ M+SGL ++++ A F M
Sbjct: 535 V--VTYNTMISGLCSKRLLQEADDLFRKM 561
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/371 (19%), Positives = 163/371 (43%), Gaps = 29/371 (7%)
Query: 256 RVDEAIHLFETM----PDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPF----KDMAAWS 307
+VD+A+ LF M P + V + ++S +A+ E+ + M D+ +S
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 308 AMITAYVDEKLLGEAL----ELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRS 363
I + L AL ++ L E ++ +++++GY + +A+ L M+
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 364 CFRPCVTTMTSIITSCDGMVEIMQAHAMV---IHLGFEQNTWVTNALITLYSKSGDLCSA 420
++P T T++I + +A A+V + G + + ++ K GD+ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 421 MLVFELLKSK----DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSA 476
+ + +++ +VV + +I + + H A+ +F M T G +P+ +T+ L++
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 477 CSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMD-----VVSTIPP 531
+ G + R+ ++ +N V ++ L+D + G + EA + +I P
Sbjct: 303 LCNYGRWSDASRLLSNML-EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 532 SEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSS-GGYVLLSNAYAAEEQWDEFA 590
I +L+ G C +H + A + + ++S + + Y L N + ++ ++
Sbjct: 362 DTITYNLLIN--GFC-MHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGV 418
Query: 591 QVRKRMKEKNV 601
++ + M ++ +
Sbjct: 419 ELFREMSQRGL 429
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 161/367 (43%), Gaps = 51/367 (13%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQR-----DAVSYNSMIAVYLKNKDVHGAETIFKAMS 113
N ++IL +RG+ A LFDEM + D+ ++N++I + KN V A IFK M
Sbjct: 177 NSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDME 236
Query: 114 ----ERDVVAQSAMVDGYAKAGRLDNAREVFDNMTER------NAFSWTSLISGYFRCGR 163
DVV + ++DG +AG++ A V M ++ N S+T+L+ GY
Sbjct: 237 LYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQE 296
Query: 164 TEEALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHARR--------FFDLMPEKNTI 211
+EA+ +F M R + VT+ T++ G ++ D + F P+ T
Sbjct: 297 IDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACT- 355
Query: 212 AWTAMVKSYLDNGQFSEGYKLFLEMPERNVR----SWNVMISGCLSANRVDEAIHLFETM 267
+ ++K++ D G K+F EM + S++V+I N D A LF +
Sbjct: 356 -FNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNEL 414
Query: 268 PDRN-----------HVSWTAMVSGLAQNKMVEVARKYFDIM---PFKDMAAWSAMITAY 313
++ ++ M L N + A K F + +D ++ +IT +
Sbjct: 415 FEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGH 474
Query: 314 VDEKLLGEALELFNLVPEK----NVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCV 369
E A EL L+ + ++ + +IDG ++ GEA A MLRS + P
Sbjct: 475 CREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVA 534
Query: 370 TTMTSII 376
TT S++
Sbjct: 535 TTFHSVL 541
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 135/329 (41%), Gaps = 72/329 (21%)
Query: 192 NGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPE----RNVRSWNVM 247
NG V R+F+ ++++SY + G F E KLF M + +V ++N +
Sbjct: 131 NGCVKLQDRYFN-----------SLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSL 179
Query: 248 ISGCLSANRVDEAIHLFETM-------PDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPF 300
+S L R A LF+ M PD ++ +++G +N MV+ A F I F
Sbjct: 180 LSILLKRGRTGMAHDLFDEMRRTYGVTPD--SYTFNTLINGFCKNSMVDEA---FRI--F 232
Query: 301 KDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILM 360
KDM EL++ P+ V +NTIIDG R G+ A + M
Sbjct: 233 KDM--------------------ELYHCNPD--VVTYNTIIDGLCRAGKVKIAHNVLSGM 270
Query: 361 LRSC--FRPCVTTMTSIITSCDGMVEIMQAHAMVIH----LGFEQNTWVTNALIT----- 409
L+ P V + T+++ EI +A +V H G + N N LI
Sbjct: 271 LKKATDVHPNVVSYTTLVRGYCMKQEIDEA-VLVFHDMLSRGLKPNAVTYNTLIKGLSEA 329
Query: 410 -LYSKSGDLC----SAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTK 464
Y + D+ A F + D ++ +I A+ + GH A++VF M+
Sbjct: 330 HRYDEIKDILIGGNDAFTTF----APDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLH 385
Query: 465 PDEITFVGLLSACSHAGLVNQGRRVFDSI 493
PD ++ L+ ++ +F+ +
Sbjct: 386 PDSASYSVLIRTLCMRNEFDRAETLFNEL 414
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 170/356 (47%), Gaps = 58/356 (16%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSE 114
N I L G+ +A +L +M +R + V+++++I ++K + AE ++ M +
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 115 R----DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAF----SWTSLISGYFRCGRTEE 166
R D+ S++++G+ RLD A+ +F+ M ++ F ++ +LI G+ + R EE
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 167 ALQLFDQMSERSVV----TWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVK 218
++LF +MS+R +V T+ T++ G Q G D A++ F M + I ++ ++
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 219 SYLDNGQFSEGYKLFLEMP----ERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVS 274
G+ + +F + E ++ ++N+MI G A +V++ LF ++
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS------ 527
Query: 275 WTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEK-- 332
+ G+ N ++ ++ MI+ + + L EA LF + E
Sbjct: 528 ----LKGVKPNVII-----------------YTTMISGFCRKGLKEEADALFREMKEDGT 566
Query: 333 --NVGIWNTIIDGYVRNGEAGEALRLFILMLRSC-FRPCVTTMTSIITSC-DGMVE 384
N G +NT+I +R+G+ + L I +RSC F +T++ +I DG +E
Sbjct: 567 LPNSGTYNTLIRARLRDGDKAASAEL-IKEMRSCGFVGDASTISMVINMLHDGRLE 621
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/483 (21%), Positives = 202/483 (41%), Gaps = 86/483 (17%)
Query: 85 DAVSYNSMIAVYLKNKDVHGAETIFKAMS----ERDVVAQSAMVDGYAKAGRLDNAREVF 140
D SYN +I + + + A + M E D+V S++++GY R+ A +
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 141 DNM----TERNAFSWTSLISGYFRCGRTEEALQLFDQMSER----SVVTWTTMVSGFAQN 192
D M + N ++ +LI G F + EA+ L D+M R + T+ T+V+G +
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233
Query: 193 GLVDHARRFFDLMP----EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVR----SW 244
G +D A M E + + +T ++ + + ++ LF EM + +R ++
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 245 NVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFKDMA 304
N +I + R +A L M +R I P ++
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERK-------------------------INP--NVV 326
Query: 305 AWSAMITAYVDEKLLGEALELFNLVPEKNVG----IWNTIIDGYVRNGEAGEALRLFILM 360
+SA+I A+V E L EA +L++ + ++++ ++++I+G+ + EA +F LM
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 361 L-RSCFRPCVTTMTSIITSCDG--MVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDL 417
+ + CF VT T I C + E M+ + G NT N LI ++GD
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446
Query: 418 CSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSAC 477
A ++F +MV+ G PD IT+ LL
Sbjct: 447 -------------------------------DMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Query: 478 SHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEA 537
G + + VF+ ++ + + + Y+ +++ + +AG V + D+ ++ +
Sbjct: 476 CKYGKLEKALVVFEYLQKS-KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534
Query: 538 VLV 540
V++
Sbjct: 535 VII 537
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 153/331 (46%), Gaps = 24/331 (7%)
Query: 256 RVDEAIHLFETM----PDRNHVSWTAMVSGLAQ-NK---MVEVARKYFDIMPFKDMAAWS 307
++D+A+ LF M P + V + ++S +A+ NK ++ + + ++ D+ +++
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 308 AMITAYVDEKLLGEAL----ELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRS 363
+I + L AL ++ L E ++ +++++GY EA+ L M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 364 CFRPCVTTMTSIITSCDGMVEIMQAHAMV---IHLGFEQNTWVTNALITLYSKSGDLCSA 420
++P T ++I + +A A++ + G + + + ++ K GD+ A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 421 M-LVFELLKSK---DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSA 476
+ L+ ++ K K DVV +T +I A N+ + + AL +F M G +P+ +T+ L+
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 477 -CSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEID 535
C++ + R + D I+ N N V +S L+D + G + EA + + ID
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPN--VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 536 EAVLV--ALLGACKLHGNIKVANSIGQKLLS 564
+ +L+ +H + A + + ++S
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMIS 388
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 159/331 (48%), Gaps = 56/331 (16%)
Query: 62 ITILGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSER-- 115
I+ L G+ +A +L +M ++ + V++N++I ++K AE + M +R
Sbjct: 227 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286
Query: 116 --DVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAF----SWTSLISGYFRCGRTEEALQ 169
D+ +++++G+ RLD A+++F+ M ++ F ++ +LI G+ + R E+ +
Sbjct: 287 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346
Query: 170 LFDQMSERSVV----TWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYL 221
LF +MS R +V T+TT++ G +G D+A++ F M + + ++ ++
Sbjct: 347 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 406
Query: 222 DNGQFSEGYKLFLEMPERNVR----SWNVMISGCLSANRVDEAIHLFETMPDR----NHV 273
+NG+ + ++F M + ++ + MI G A +VD+ LF ++ + N V
Sbjct: 407 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 466
Query: 274 SWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKN 333
++ M+SGL ++++ AY K + E P +
Sbjct: 467 TYNTMISGLCSKRLLQ---------------------EAYALLKKMKED------GPLPD 499
Query: 334 VGIWNTIIDGYVRNGEAGEALRLFILMLRSC 364
G +NT+I ++R+G+ + L I +RSC
Sbjct: 500 SGTYNTLIRAHLRDGDKAASAEL-IREMRSC 529
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/461 (20%), Positives = 196/461 (42%), Gaps = 53/461 (11%)
Query: 88 SYNSMIAVYLKNKDVHGAETIFKAMS----ERDVVAQSAMVDGYAKAGRLDNAREVFDNM 143
+YN +I + + + A + M E +V S++++GY R+ +A + D M
Sbjct: 47 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 106
Query: 144 TER----NAFSWTSLISGYFRCGRTEEALQLFDQMSER----SVVTWTTMVSGFAQNGLV 195
E + ++T+LI G F + EA+ L D+M +R ++VT+ +V+G + G +
Sbjct: 107 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 166
Query: 196 DHARRFFDLMP----EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVR----SWNVM 247
D A + M E + + + ++ S + LF EM + +R +++ +
Sbjct: 167 DLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 226
Query: 248 ISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLA-QNKMVEVARKYFDIMPFK- 301
IS S R +A L M ++ N V++ A++ + K VE + + D++
Sbjct: 227 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286
Query: 302 --DMAAWSAMITAYVDEKLLGEALELFNLVPEKN----VGIWNTIIDGYVRNGEAGEALR 355
D+ ++++I + L +A ++F + K+ + +NT+I G+ ++ +
Sbjct: 287 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346
Query: 356 LFILMLRSCFRPCVTTMTSIIT------SCDGMVEIMQAHAMVIHLGFEQNTWVTNALIT 409
LF M T T++I CD ++ + ++ G + + L+
Sbjct: 347 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ---MVSDGVPPDIMTYSILLD 403
Query: 410 LYSKSGDLCSAMLVFELLKSK----DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKP 465
+G L A+ VF+ ++ D+ +T MI G +F + G KP
Sbjct: 404 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 463
Query: 466 DEITFVGLLSACSHAGLVNQGRRVFDSIK--------GAYN 498
+ +T+ ++S L+ + + +K G YN
Sbjct: 464 NVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYN 504
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 192/414 (46%), Gaps = 32/414 (7%)
Query: 147 NAFSWTSLISGYFRCGRTEEALQLFDQMS----ERSVVTWTTMVSGFAQNGLVDHARRFF 202
N +++ LI+ + R + AL L +M E S+VT +++++G+ + A
Sbjct: 44 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 103
Query: 203 DLMPE----KNTIAWTAMVKSYLDNGQFSEGYKLFLEMPER----NVRSWNVMISGCLSA 254
D M E +TI +T ++ + + SE L M +R N+ ++ V+++G
Sbjct: 104 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 163
Query: 255 NRVDEAIHLFETMP----DRNHVSWTAMVSGLAQNKMVEVARKYFDIMPFK----DMAAW 306
+D A +L M + + V + ++ L + + V+ A F M K ++ +
Sbjct: 164 GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223
Query: 307 SAMITAYVDEKLLGEALELFNLVPEK----NVGIWNTIIDGYVRNGEAGEALRLFILMLR 362
S++I+ +A +L + + EK N+ +N +ID +V+ G+ EA +L M++
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283
Query: 363 SCFRPCVTTMTSIITS-C--DGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCS 419
P + T S+I C D + + Q ++ + N LI + KS +
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343
Query: 420 AMLVFELLKSK----DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLS 475
+F + + D V++T +I + G +A +VF +MV+ G PD +T+ LL
Sbjct: 344 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 403
Query: 476 ACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTI 529
+ G + + VFD ++ + + L + Y+ +++ + +AG V++ D+ ++
Sbjct: 404 GLCNNGKLEKALEVFDYMQKS-EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 456
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 115/235 (48%), Gaps = 24/235 (10%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSE 114
N I + GK EA KL D+M +R D +YNS+I + + + A+ +F+ M
Sbjct: 259 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS 318
Query: 115 RDVVAQ----SAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEE 166
+D + ++ G+ K+ R+++ E+F M+ R + ++T+LI G F G +
Sbjct: 319 KDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 378
Query: 167 ALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVK 218
A ++F QM V +T++ ++ G NG ++ A FD M + + +T M++
Sbjct: 379 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 438
Query: 219 SYLDNGQFSEGYKLFLEMPER----NVRSWNVMISGCLSANRVDEAIHLFETMPD 269
G+ +G+ LF + + NV ++N MISG S + EA L + M +
Sbjct: 439 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 493
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 33/239 (13%)
Query: 20 GVCYHHRRRVFSQCQPIFRFLRNFTASISISHDW--SLRKRNVEITILGRRGKLKEARKL 77
G C H R + + +F F+ +S D L N I + ++++ +L
Sbjct: 299 GFCMHDR---LDKAKQMFEFM--------VSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 347
Query: 78 FDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSER----DVVAQSAMVDGYAK 129
F EM R D V+Y ++I + D A+ +FK M D++ S ++DG
Sbjct: 348 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 407
Query: 130 AGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQLFDQMSER----SVVT 181
G+L+ A EVFD M + + + +T++I G + G+ ++ LF +S + +VVT
Sbjct: 408 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 467
Query: 182 WTTMVSGFAQNGLVDHARRFFDLMPEKNTI----AWTAMVKSYLDNGQFSEGYKLFLEM 236
+ TM+SG L+ A M E + + +++++L +G + +L EM
Sbjct: 468 YNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/488 (23%), Positives = 207/488 (42%), Gaps = 78/488 (15%)
Query: 62 ITILGRRGKLKEARKLFDEM----PQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSE--- 114
I+ LGR GK+ A+++F+ +++++I+ Y ++ A ++F +M E
Sbjct: 240 ISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGL 299
Query: 115 -RDVVAQSAMVDGYAKAG-RLDNAREVFDNMTERNA-----FSWTSLISGYFRCGRTEEA 167
++V +A++D K G + FD M +RN ++ SL++ R G E A
Sbjct: 300 RPNLVTYNAVIDACGKGGMEFKQVAKFFDEM-QRNGVQPDRITFNSLLAVCSRGGLWEAA 358
Query: 168 LQLFDQMS----ERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKS 219
LFD+M+ E+ V ++ T++ + G +D A MP K N ++++ ++
Sbjct: 359 RNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDG 418
Query: 220 YLDNGQFSEGYKLFLEMPERNVR----SWNVMISGCLSANRVDEAIHLFETMPD----RN 271
+ G+F E LF EM + S+N ++S R +EA+ + M ++
Sbjct: 419 FAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKD 478
Query: 272 HVSWTAMVSGLAQNKMVEVARKYFDIMP----FKDMAAWSAMITAYVDEKLLGEALELFN 327
V++ A++ G + + +K F M ++ +S +I Y L EA+E+F
Sbjct: 479 VVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFR 538
Query: 328 LVP----EKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMV 383
+V +++ +ID +NG G A+ L M + P V T SII + G
Sbjct: 539 EFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF-GRS 597
Query: 384 EIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDL---CSAMLVFELLKSKDVVSWTAMIV 440
M A YS G L SA+ + V+ +
Sbjct: 598 ATMDRSAD-------------------YSNGGSLPFSSSALSALTETEGNRVIQLFGQLT 638
Query: 441 AYANHGHGHHA----------LQVFARMVTSGTKPDEITFVGLLSACSH------AGLVN 484
+N+ L+VF +M KP+ +TF +L+ACS A ++
Sbjct: 639 TESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLL 698
Query: 485 QGRRVFDS 492
+ R+FD+
Sbjct: 699 EELRLFDN 706
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 161/352 (45%), Gaps = 40/352 (11%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSE 114
N + + R G + AR LFDEM R D SYN+++ K + A I M
Sbjct: 343 NSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPV 402
Query: 115 R----DVVAQSAMVDGYAKAGRLDNAREVFDNM----TERNAFSWTSLISGYFRCGRTEE 166
+ +VV+ S ++DG+AKAGR D A +F M + S+ +L+S Y + GR+EE
Sbjct: 403 KRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEE 462
Query: 167 ALQLFDQMS----ERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVK 218
AL + +M+ ++ VVT+ ++ G+ + G D ++ F M + N + ++ ++
Sbjct: 463 ALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLID 522
Query: 219 SYLDNGQFSEGYKLFLEMPERNVRSWNVMISGCLSA----NRVDEAIHLFETMPDR---- 270
Y G + E ++F E +R+ V+ S + A V A+ L + M
Sbjct: 523 GYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISP 582
Query: 271 NHVSWTAMVSGLAQNKMVEVARKYFD--IMPFKDMAAWSAMITAYVDEKLLGEALELF-N 327
N V++ +++ ++ ++ + Y + +PF +A SA+ E ++LF
Sbjct: 583 NVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSS-SALSALT-----ETEGNRVIQLFGQ 636
Query: 328 LVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC 379
L E N +G E L +F M + +P V T ++I+ +C
Sbjct: 637 LTTESNNRTTKDCEEGMQ---ELSCILEVFRKMHQLEIKPNVVTFSAILNAC 685
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 163/385 (42%), Gaps = 62/385 (16%)
Query: 183 TTMVSGFAQNGLVDHARRFFDLM---PEKNTI-AWTAMVKSYLDNGQFSEGYKLFLEMPE 238
+ M+S + G V A+R F+ NT+ A++A++ +Y +G E +F M E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 239 RNVR----SWNVMISGCLSAN-RVDEAIHLFETM------PDRNHVSWTAMVSGLAQNKM 287
+R ++N +I C + F+ M PDR +++ ++++ ++ +
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDR--ITFNSLLAVCSRGGL 354
Query: 288 VEVARKYFDIMPFK----DMAAWSAMITAYVDEKLLGEALELFNLVPEK----NVGIWNT 339
E AR FD M + D+ +++ ++ A + A E+ +P K NV ++T
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 340 IIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQ 399
+IDG+ + G EAL LF M +LG
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMR--------------------------------YLGIAL 442
Query: 400 NTWVTNALITLYSKSGDLCSAMLVFELLKS----KDVVSWTAMIVAYANHGHGHHALQVF 455
+ N L+++Y+K G A+ + + S KDVV++ A++ Y G +VF
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 456 ARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGR 515
M P+ +T+ L+ S GL + +F K A L V YS L+D L +
Sbjct: 503 TEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSA-GLRADVVLYSALIDALCK 561
Query: 516 AGLVNEAMDVVSTIPPSEIDEAVLV 540
GLV A+ ++ + I V+
Sbjct: 562 NGLVGSAVSLIDEMTKEGISPNVVT 586
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 174/398 (43%), Gaps = 65/398 (16%)
Query: 121 SAMVDGYAKAGRLDNAREVFDNMTE----RNAFSWTSLISGYFRCGRTEEALQLFDQMSE 176
SAM+ + G++ A+ +F+ +++++LIS Y R G EEA+ +F+ M E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 177 ----RSVVTWTTMVSGFAQNGL-VDHARRFFDLMP----EKNTIAWTAMVKSYLDNGQFS 227
++VT+ ++ + G+ +FFD M + + I + +++ G +
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 228 EGYKLFLEMP----ERNVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMV 279
LF EM E++V S+N ++ ++D A + MP + N VS++ ++
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 280 SGLAQNKMVEVARKYFDIMPF----KDMAAWSAMITAYVDEKLLGEAL----ELFNLVPE 331
G A+ + A F M + D +++ +++ Y EAL E+ ++ +
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 332 KNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAM 391
K+V +N ++ GY + G+ E ++F M R P + T +++I DG
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLI---DG---------- 523
Query: 392 VIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKS----KDVVSWTAMIVAYANHGH 447
YSK G AM +F KS DVV ++A+I A +G
Sbjct: 524 -------------------YSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGL 564
Query: 448 GHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQ 485
A+ + M G P+ +T+ ++ A + +++
Sbjct: 565 VGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDR 602
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 168/371 (45%), Gaps = 41/371 (11%)
Query: 114 ERDVVAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQ 169
E D+V +++++G+ R+ +A + D M E + ++T+LI G F + EA+
Sbjct: 145 EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVA 204
Query: 170 LFDQMSER----SVVTWTTMVSGFAQNGLVDHARRFFDLMP----EKNTIAWTAMVKSYL 221
L D+M +R +VT+ +V+G + G D A + M E N + ++ ++ S
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 264
Query: 222 DNGQFSEGYKLFLEMPERNVR----SWNVMISGCLSANRVDEAIHLFETMPDR----NHV 273
+ LF EM + VR +++ +IS + R +A L M +R N V
Sbjct: 265 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 324
Query: 274 SWTAMVSGLAQNKMVEVARKYFDIMPFK----DMAAWSAMITAYVDEKLLGEALELFNLV 329
+++A++ + + A K ++ M + ++ +S++I + LGEA ++ L+
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384
Query: 330 PEK----NVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSII------TSC 379
K NV +NT+I+G+ + + + LF M + T T++I C
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 444
Query: 380 DGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLK----SKDVVSW 435
D + + ++ +G N N L+ K+G L AM+VFE L+ D+ ++
Sbjct: 445 DNAQMVFKQ---MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 501
Query: 436 TAMIVAYANHG 446
MI G
Sbjct: 502 NIMIEGMCKAG 512
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 147/336 (43%), Gaps = 57/336 (16%)
Query: 70 KLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMS----ERDVVAQS 121
K EA L D M QR D V+Y +++ K D A + M E +VV S
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257
Query: 122 AMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQLFDQMSER 177
++D K D+A +F M + N +++SLIS GR +A +L M ER
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 317
Query: 178 SV----VTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFSEG 229
+ VT++ ++ F + G + A + ++ M ++ N +++++ + + E
Sbjct: 318 KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEA 377
Query: 230 YKLFLEMPER-----NVRSWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVS 280
K LE+ R NV ++N +I+G A RVD+ + LF M R N V++T ++
Sbjct: 378 -KQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436
Query: 281 GLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTI 340
G Q + + A+ M FK M + N+ +N +
Sbjct: 437 GFFQARDCDNAQ-----MVFKQMVSVGV----------------------HPNILTYNIL 469
Query: 341 IDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSII 376
+DG +NG+ +A+ +F + RS P + T +I
Sbjct: 470 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 505
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 94/183 (51%), Gaps = 20/183 (10%)
Query: 67 RRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSERD----VV 118
++GKL +A KL++EM +R + +Y+S+I + + A+ + + M +D VV
Sbjct: 335 KKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVV 394
Query: 119 AQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQLFDQM 174
+ +++G+ KA R+D E+F M++R N ++T+LI G+F+ + A +F QM
Sbjct: 395 TYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 454
Query: 175 SE----RSVVTWTTMVSGFAQNGLVDHARRFFDLMP----EKNTIAWTAMVKSYLDNGQF 226
+++T+ ++ G +NG + A F+ + E + + M++ G++
Sbjct: 455 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW 514
Query: 227 SEG 229
G
Sbjct: 515 KMG 517
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 118/272 (43%), Gaps = 19/272 (6%)
Query: 238 ERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNH----VSWTAMVSGLAQNKMVEVARK 293
E ++ + N +++G NR+ +A+ L + M + + V++T ++ GL + A
Sbjct: 145 EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVA 204
Query: 294 YFDIMPFK----DMAAWSAMITAYVDEKLLGEALELFNLVP----EKNVGIWNTIIDGYV 345
D M + D+ + A++ AL L N + E NV I++T+ID
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 264
Query: 346 RNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMV---IHLGFEQNTW 402
+ +AL LF M RP V T +S+I+ A ++ I N
Sbjct: 265 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 324
Query: 403 VTNALITLYSKSGDLCSAMLVFELLKSK----DVVSWTAMIVAYANHGHGHHALQVFARM 458
+ALI + K G L A ++E + + ++ +++++I + A Q+ M
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384
Query: 459 VTSGTKPDEITFVGLLSACSHAGLVNQGRRVF 490
+ P+ +T+ L++ A V++G +F
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELF 416
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/444 (22%), Positives = 197/444 (44%), Gaps = 66/444 (14%)
Query: 70 KLKEARKLFDEM----PQRDAVSYNSMI-AVYLKNKDVHGAETIFKAMS---ERDVVAQS 121
++ EA L D+M Q + V++N++I ++L NK I + ++ + D+V
Sbjct: 166 RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYG 225
Query: 122 AMVDGYAKAGRLDNAREVFDNMT----ERNAFSWTSLISGYFRCGRTEEALQLFDQMSER 177
+V+G K G D A + + M E + ++I G + ++AL LF +M +
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 285
Query: 178 ----SVVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFSEG 229
+VVT+++++S G A R M E+ + ++A++ +++ G+ E
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 230 YKLFLEMPERNVR----SWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSG 281
KL+ EM +R++ +++ +I+G +R+DEA +FE M + + V++ ++ G
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 405
Query: 282 LAQNKMVEVARKYFDIMPFKDMAA----WSAMITAYVDEKLLGEALELF-----NLVPEK 332
+ K VE + F M + + ++ +I A E+F + VP
Sbjct: 406 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP- 464
Query: 333 NVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMV 392
N+ +NT++DG +NG+ +A+ +F + RS P + T +I +GM +
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI---EGMCKA------- 514
Query: 393 IHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHAL 452
G ++ W ++L DVV++ MI + G A
Sbjct: 515 ---GKVEDGWDLFCNLSLKGVK---------------PDVVAYNTMISGFCRKGSKEEAD 556
Query: 453 QVFARMVTSGTKPDEITFVGLLSA 476
+F M GT P+ + L+ A
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLIRA 580
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 161/342 (47%), Gaps = 37/342 (10%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSE 114
N I L + + +A LF EM + + V+Y+S+I+ A + M E
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 115 R----DVVAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEE 166
R DV SA++D + K G+L A +++D M +R + +++SLI+G+ R +E
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 167 ALQLFDQMSER----SVVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVK 218
A Q+F+ M + VVT+ T++ GF + V+ F M ++ NT+ + +++
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 219 SYLDNGQFSEGYKLFLEMPER----NVRSWNVMISGCLSANRVDEAIHLFETMP----DR 270
G ++F EM N+ ++N ++ G ++++A+ +FE + +
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 271 NHVSWTAMVSGLAQNKMVEVARKYFDIMPFK----DMAAWSAMITAYVDEKLLGEALELF 326
++ M+ G+ + VE F + K D+ A++ MI+ + + EA LF
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559
Query: 327 NLVPE----KNVGIWNTIIDGYVRNGEAGEALRLFILMLRSC 364
+ E N G +NT+I +R+G+ EA I +RSC
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRARLRDGDR-EASAELIKEMRSC 600
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 180/432 (41%), Gaps = 51/432 (11%)
Query: 114 ERDVVAQSAMVDGYAKAGRLDNAREVFDNM----TERNAFSWTSLISGYFRCGRTEEALQ 169
E ++V S++++GY + R+ A + D M + N ++ +LI G F + EA+
Sbjct: 148 EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMA 207
Query: 170 LFDQM----SERSVVTWTTMVSGFAQNGLVDHARRFFDLMP----EKNTIAWTAMVKSYL 221
L D+M + +VT+ +V+G + G D A + M E + + ++
Sbjct: 208 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 267
Query: 222 DNGQFSEGYKLFLEMPERNVR----SWNVMISGCLSANRVDEAIHLFETMPDR----NHV 273
+ LF EM + +R +++ +IS + R +A L M +R +
Sbjct: 268 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 327
Query: 274 SWTAMVSGLA-QNKMVEVARKYFDIMPFKDM----AAWSAMITAYVDEKLLGEALELFNL 328
+++A++ + K+VE A K +D M + + +S++I + L EA ++F
Sbjct: 328 TFSALIDAFVKEGKLVE-AEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386
Query: 329 VPEK----NVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIIT------S 378
+ K +V +NT+I G+ + E + +F M + T +I
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446
Query: 379 CDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLK----SKDVVS 434
CD EI + ++ G N N L+ K+G L AM+VFE L+ + +
Sbjct: 447 CDMAQEIFKE---MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 435 WTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIK 494
+ MI G +F + G KPD + + ++S G + +F +K
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563
Query: 495 --------GAYN 498
G YN
Sbjct: 564 EDGTLPNSGCYN 575
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 125/540 (23%), Positives = 231/540 (42%), Gaps = 66/540 (12%)
Query: 35 PIFRFLRNFTASISISHDWSLRKRNVEITILGRRG----KLKEARKLFDEM----PQRDA 86
P F F S S+D+ + L R G KL +A LF EM P
Sbjct: 30 PSFSFFWRRAFSGKTSYDYREK--------LSRNGLSELKLDDAVALFGEMVKSRPFPSI 81
Query: 87 VSYNSMIAVYLKNKDVHGAETIFKAMSERDV----VAQSAMVDGYAKAGRLDNAREVFDN 142
+ ++ +++ K ++ + M + S +++ + + +L A V
Sbjct: 82 IEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGK 141
Query: 143 MT----ERNAFSWTSLISGYFRCGRTEEALQLFDQM----SERSVVTWTTMVSGFAQNGL 194
M E N + +SL++GY R EA+ L DQM + + VT+ T++ G +
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 201
Query: 195 VDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFSEGYKLFLEMP----ERNVRSWNV 246
A D M K + + + +V G + L +M E V +N
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 261
Query: 247 MISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQ-NKMVEVARKYFDIMPFK 301
+I G +D+A++LF+ M + N V++++++S L + + +R D++ K
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 302 ---DMAAWSAMITAYVDEKLLGEALELFNLVPEKNVG----IWNTIIDGYVRNGEAGEAL 354
D+ +SA+I A+V E L EA +L++ + ++++ ++++I+G+ + EA
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 355 RLFILML-RSCFRPCVTTMTSIITSC--DGMVEIMQAHAMVIHLGFEQNTWVTNALITLY 411
++F M+ + CF VT T I C + E M+ + G NT N LI
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 441
Query: 412 SKSGDLCSAMLVFELLKS----KDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDE 467
++GD A +F+ + S +++++ ++ +G A+ VF + S +P
Sbjct: 442 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501
Query: 468 ITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLK-----VEHYSCLVDMLGRAGLVNEA 522
T+ ++ AG V G +F NL+LK V Y+ ++ R G EA
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLF------CNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 118/521 (22%), Positives = 219/521 (42%), Gaps = 76/521 (14%)
Query: 132 RLDNAREVFDNMTERNAFS----WTSLISGYFRCGRTEEALQLFDQMSERSV----VTWT 183
+LD+A +F M + F ++ L+S + + + + L +QM + T++
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 184 TMVSGFAQNGLVDHAR----RFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYKL----FLE 235
+++ F + + A + L E N + ++++ Y + + SE L F+
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 236 MPERNVRSWNVMISGCLSANRVDEAIHLFETM------PDRNHVSWTAMVSGLAQNKMVE 289
+ N ++N +I G N+ EA+ L + M PD V++ +V+GL + +
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL--VTYGVVVNGLCKRGDTD 238
Query: 290 VARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTIIDGYVRNGE 349
+A F+++ +E L P V I+NTIIDG +
Sbjct: 239 LA---FNLL----------------------NKMEQGKLEP--GVLIYNTIIDGLCKYKH 271
Query: 350 AGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMV---IHLGFEQNTWVTNA 406
+AL LF M RP V T +S+I+ A ++ I + + +A
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 407 LITLYSKSGDLCSAMLVF-ELLK---SKDVVSWTAMIVAYANHGHGHHALQVFARMVTSG 462
LI + K G L A ++ E++K +V+++++I + H A Q+F MV+
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391
Query: 463 TKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEA 522
PD +T+ L+ V +G VF + L Y+ L+ L +AG + A
Sbjct: 392 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREM-SQRGLVGNTVTYNILIQGLFQAGDCDMA 450
Query: 523 MDVVST-----IPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLL--SLEPTSSGGYVL 575
++ +PP+ + L L G CK +G ++ A + + L +EPT ++
Sbjct: 451 QEIFKEMVSDGVPPNIMTYNTL--LDGLCK-NGKLEKAMVVFEYLQRSKMEPTIYTYNIM 507
Query: 576 ---LSNAYAAEEQWDEFAQVRKRMKEKNV----KKISGFSQ 609
+ A E+ WD F + + + +V ISGF +
Sbjct: 508 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 548
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 115/234 (49%), Gaps = 20/234 (8%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSE 114
N I+ + GKL EA KL DEM R D V+YNSMI + K+ A+ +F M+
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
Query: 115 RDVVAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQL 170
DVV + ++D Y +A R+D ++ ++ R N ++ +LI G+ A L
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 171 FDQMSERSV----VTWTTMVSGFAQNGLVDHARRFFDLMP----EKNTIAWTAMVKSYLD 222
F +M V +T ++ GF +N ++ A F+++ + +T+A+ ++
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 549
Query: 223 NGQFSEGYKLFLEMP----ERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNH 272
+ E + LF +P E +V+++NVMISG + + +A LF M D H
Sbjct: 550 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 603
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/462 (23%), Positives = 202/462 (43%), Gaps = 40/462 (8%)
Query: 101 DVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERN----AFSWTSLIS 156
DV T+ + D ++++ + GY A +FD M E ++ +LI+
Sbjct: 175 DVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLIN 234
Query: 157 GYFRCGRTEEALQLFDQMSER----SVVTWTTMVSGFAQNGLVDHARRFFDLMPE----K 208
G GR EA L ++M + VVT+ T+V+G + G A M E
Sbjct: 235 GLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKP 294
Query: 209 NTIAWTAMVKSYLDNGQFSEGYKLFLEMPER----NVRSWNVMISGCLSANRVDEAIHLF 264
+ + ++A++ +G S+ LF EM E+ NV ++N MI G S R +A L
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354
Query: 265 ETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIM----PFKDMAAWSAMITAYVDE 316
M +R + +++ A++S + + A K D M F D +++MI +
Sbjct: 355 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 414
Query: 317 KLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSII 376
+A +F+L+ +V +NTIID Y R E ++L + R R V T+
Sbjct: 415 NRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISR---RGLVANTTTYN 471
Query: 377 TSCDGMVEIMQAHA-------MVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLK- 428
T G E+ +A M+ H G +T N L+ + ++ L A+ +FE+++
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISH-GVCPDTITCNILLYGFCENEKLEEALELFEVIQM 530
Query: 429 SK---DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQ 485
SK D V++ +I A +F + G +PD T+ ++S ++
Sbjct: 531 SKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISD 590
Query: 486 GRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVS 527
+F +K + Y+ L+ +AG ++++++++S
Sbjct: 591 ANVLFHKMKDNGH-EPDNSTYNTLIRGCLKAGEIDKSIELIS 631
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 152/312 (48%), Gaps = 51/312 (16%)
Query: 69 GKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSER----DVVAQ 120
G+ +A++L +M +R D +++N++I+ +K + AE + M R D V
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 404
Query: 121 SAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVV 180
++M+ G+ K R D+A+ +FD M + ++ ++I Y R R +E +QL ++S R +V
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464
Query: 181 ----TWTTMVSGFAQNGLVDHARRFFDLMPE----KNTIAWTAMVKSYLDNGQFSEGYKL 232
T+ T++ GF + ++ A+ F M +TI ++ + +N + E +L
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524
Query: 233 F--LEMPERNVRS--WNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMV 288
F ++M + ++ + +N++I G ++VDEA LF ++P + G+
Sbjct: 525 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP----------IHGVE----- 569
Query: 289 EVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVP----EKNVGIWNTIIDGY 344
D+ ++ MI+ + + + +A LF+ + E + +NT+I G
Sbjct: 570 ------------PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGC 617
Query: 345 VRNGEAGEALRL 356
++ GE +++ L
Sbjct: 618 LKAGEIDKSIEL 629
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/462 (23%), Positives = 202/462 (43%), Gaps = 40/462 (8%)
Query: 101 DVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERN----AFSWTSLIS 156
DV T+ + D ++++ + GY A +FD M E ++ +LI+
Sbjct: 175 DVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLIN 234
Query: 157 GYFRCGRTEEALQLFDQMSER----SVVTWTTMVSGFAQNGLVDHARRFFDLMPE----K 208
G GR EA L ++M + VVT+ T+V+G + G A M E
Sbjct: 235 GLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKP 294
Query: 209 NTIAWTAMVKSYLDNGQFSEGYKLFLEMPER----NVRSWNVMISGCLSANRVDEAIHLF 264
+ + ++A++ +G S+ LF EM E+ NV ++N MI G S R +A L
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354
Query: 265 ETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIM----PFKDMAAWSAMITAYVDE 316
M +R + +++ A++S + + A K D M F D +++MI +
Sbjct: 355 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 414
Query: 317 KLLGEALELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSII 376
+A +F+L+ +V +NTIID Y R E ++L + R R V T+
Sbjct: 415 NRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISR---RGLVANTTTYN 471
Query: 377 TSCDGMVEIMQAHA-------MVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLK- 428
T G E+ +A M+ H G +T N L+ + ++ L A+ +FE+++
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISH-GVCPDTITCNILLYGFCENEKLEEALELFEVIQM 530
Query: 429 SK---DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQ 485
SK D V++ +I A +F + G +PD T+ ++S ++
Sbjct: 531 SKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISD 590
Query: 486 GRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVS 527
+F +K + Y+ L+ +AG ++++++++S
Sbjct: 591 ANVLFHKMKDNGH-EPDNSTYNTLIRGCLKAGEIDKSIELIS 631
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 115/234 (49%), Gaps = 20/234 (8%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSE 114
N I+ + GKL EA KL DEM R D V+YNSMI + K+ A+ +F M+
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
Query: 115 RDVVAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQL 170
DVV + ++D Y +A R+D ++ ++ R N ++ +LI G+ A L
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 171 FDQMSERSV----VTWTTMVSGFAQNGLVDHARRFFDLMP----EKNTIAWTAMVKSYLD 222
F +M V +T ++ GF +N ++ A F+++ + +T+A+ ++
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 549
Query: 223 NGQFSEGYKLFLEMP----ERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNH 272
+ E + LF +P E +V+++NVMISG + + +A LF M D H
Sbjct: 550 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 603
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 152/312 (48%), Gaps = 51/312 (16%)
Query: 69 GKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSER----DVVAQ 120
G+ +A++L +M +R D +++N++I+ +K + AE + M R D V
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 404
Query: 121 SAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQLFDQMSERSVV 180
++M+ G+ K R D+A+ +FD M + ++ ++I Y R R +E +QL ++S R +V
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464
Query: 181 ----TWTTMVSGFAQNGLVDHARRFFDLMPE----KNTIAWTAMVKSYLDNGQFSEGYKL 232
T+ T++ GF + ++ A+ F M +TI ++ + +N + E +L
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524
Query: 233 F--LEMPERNVRS--WNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMV 288
F ++M + ++ + +N++I G ++VDEA LF ++P + G+
Sbjct: 525 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP----------IHGVE----- 569
Query: 289 EVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVP----EKNVGIWNTIIDGY 344
D+ ++ MI+ + + + +A LF+ + E + +NT+I G
Sbjct: 570 ------------PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGC 617
Query: 345 VRNGEAGEALRL 356
++ GE +++ L
Sbjct: 618 LKAGEIDKSIEL 629
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 119/527 (22%), Positives = 234/527 (44%), Gaps = 62/527 (11%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQ----RDAVSYNSMIAVYLKNKDVHGAETIFKAMSE 114
N I L + K EA LFD M + + V+Y+ +I ++ + + A + M +
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD 430
Query: 115 R----DVVAQSAMVDGYAKAGRLDNAR----EVFDNMTERNAFSWTSLISGYFRCGRTEE 166
V +++++G+ K G + A E+ + E ++TSL+ GY G+ +
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490
Query: 167 ALQLFDQMSER----SVVTWTTMVSGFAQNGLVDHARRFFDLMPE----KNTIAWTAMVK 218
AL+L+ +M+ + S+ T+TT++SG + GL+ A + F+ M E N + + M++
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550
Query: 219 SYLDNGQFSEGYKLFLEMPERNV----RSWNVMISG-CLSANRVDEAIH---LFETMPDR 270
Y + G S+ ++ EM E+ + S+ +I G CL+ + + L + +
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 610
Query: 271 NHVSWTAMVSGLAQNKMVEVARKYFDIMPFK----DMAAWSAMITA---YVDEKLL-GEA 322
N + +T ++ G + +E A M + D+ + +I + D KL G
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLL 670
Query: 323 LELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITS-CD- 380
E+ + + + I+ ++ID + G+ EA ++ LM+ P T T++I C
Sbjct: 671 KEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA 730
Query: 381 GMV---EIMQAHAMVIHLGFEQNTW------VTNALITLYSKSGDLCSAMLVFELLKSKD 431
G V E++ + + Q T+ +T + + K+ +L +A+L L +
Sbjct: 731 GFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDM-QKAVELHNAILKGLL---AN 786
Query: 432 VVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFD 491
++ +I + G A ++ RM+ G PD IT+ +++ V + +++
Sbjct: 787 TATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWN 846
Query: 492 SI--KG------AYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTIP 530
S+ KG AYN + H C+ +G+A + M IP
Sbjct: 847 SMTEKGIRPDRVAYNTLI---HGCCVAGEMGKATELRNEMLRQGLIP 890
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 115/517 (22%), Positives = 222/517 (42%), Gaps = 62/517 (11%)
Query: 52 DWSLRKRNVEITILGRRGKLKEARKLFDEMPQRD----AVSYNSMIAVYLKNKDVH-GAE 106
D ++ NV I L ++ K+ EA + ++ +D V+Y +++ K ++ G E
Sbjct: 259 DVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLE 318
Query: 107 TIFKAMSER---DVVAQSAMVDGYAKAGRLDNA----REVFDNMTERNAFSWTSLISGYF 159
+ + + R A S++V+G K G+++ A + V D N F + +LI
Sbjct: 319 MMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLC 378
Query: 160 RCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTI 211
+ + EA LFD+M + + VT++ ++ F + G +D A F M + +
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVY 438
Query: 212 AWTAMVKSYLDNGQFSEGYKLFLEMP----ERNVRSWNVMISGCLSANRVDEAIHLFETM 267
+ +++ + G S EM E V ++ ++ G S ++++A+ L+ M
Sbjct: 439 PYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498
Query: 268 PDRNHV----SWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSA---------MITAYV 314
+ ++T ++SGL + ++ A K F+ +MA W+ MI Y
Sbjct: 499 TGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN-----EMAEWNVKPNRVTYNVMIEGYC 553
Query: 315 DEKLLGEALELFNLVPEKNVGI----WNTIIDGYVRNGEAGEALRLFI--LMLRSC--FR 366
+E + +A E + EK + + +I G G+A EA ++F+ L +C
Sbjct: 554 EEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNE 612
Query: 367 PCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFEL 426
C T + + E + ++ G + + LI K D L F L
Sbjct: 613 ICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD---RKLFFGL 669
Query: 427 LK-------SKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSH 479
LK D V +T+MI A + G A ++ M+ G P+E+T+ +++
Sbjct: 670 LKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCK 729
Query: 480 AGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRA 516
AG VN+ + ++ ++ +V Y C +D+L +
Sbjct: 730 AGFVNEAEVLCSKMQPVSSVPNQVT-YGCFLDILTKG 765
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 163/372 (43%), Gaps = 32/372 (8%)
Query: 154 LISGYFRCGRTEEALQLFDQMSER-----SVVTWTTMVSGFAQNGLVDHARRFFDLMP-- 206
LI Y R R + + +F M + V T + ++ G + A F+ M
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSV 221
Query: 207 --EKNTIAWTAMVKSYLDNGQFSEGYKLFLEMP----ERNVRSWNVMISGCLSANRVDEA 260
+ +T +++S + S ++ M + N+ +NV+I G +V EA
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281
Query: 261 IHLFETMPDRNH----VSWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDE 316
+ + + + ++ V++ +V GL + + E+ + D M + A +++ V+
Sbjct: 282 VGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEG 341
Query: 317 -KLLGEALELFNLVPE-------KNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPC 368
+ G+ E NLV N+ ++N +ID + + EA LF M + RP
Sbjct: 342 LRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPN 401
Query: 369 VTTMTSIITSCDGMVEIMQAHAMV---IHLGFEQNTWVTNALITLYSKSGDLCSAM-LVF 424
T + +I ++ A + + + G + + + N+LI + K GD+ +A +
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMA 461
Query: 425 ELLKSK---DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAG 481
E++ K VV++T+++ Y + G + AL+++ M G P TF LLS AG
Sbjct: 462 EMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAG 521
Query: 482 LVNQGRRVFDSI 493
L+ ++F+ +
Sbjct: 522 LIRDAVKLFNEM 533
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 113/489 (23%), Positives = 201/489 (41%), Gaps = 90/489 (18%)
Query: 67 RRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSER----DVV 118
+RG++ A LF M QR D ++Y+++I Y K + +F + DVV
Sbjct: 298 KRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVV 357
Query: 119 AQSAMVDGYAKAGRLDNAREVFDNM----TERNAFSWTSLISGYFRCGRTEEALQLFDQM 174
S+ +D Y K+G L A V+ M N ++T LI G + GR EA ++ Q+
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417
Query: 175 SER----SVVTWTTMVSGFAQNGLVDHARRFFDLMPE----KNTIAWTAMVKSYLDNGQF 226
+R S+VT+++++ GF + G + ++ M + + + + +V G
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477
Query: 227 SEGYKLFLEMPERNVR----SWNVMISGCLSANRVDEAIHLFETM------PDRNHVSWT 276
+ ++M +++R +N +I G NR DEA+ +F M PD +
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537
Query: 277 AMVS----GLAQNKMVEVARKYFDIMPFK----DMAAWSAMITAYVDEKLLGEALELFN- 327
VS ++ + + FD+M D+A + +I + +A + FN
Sbjct: 538 MRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN 597
Query: 328 LVP---EKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSII------TS 378
L+ E ++ +NT+I GY EA R+F L+ + F P T+T +I
Sbjct: 598 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 657
Query: 379 CDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSK-------- 430
DG + + A G + N L+ +SKS D+ + +FE ++ K
Sbjct: 658 MDGAIRMFSIMA---EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVS 714
Query: 431 -------------------------------DVVSWTAMIVAYANHGHGHHALQVFARMV 459
DVV++ +I Y G A ++ M+
Sbjct: 715 YSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHML 774
Query: 460 TSGTKPDEI 468
+G KPD++
Sbjct: 775 RNGVKPDDL 783
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 110/508 (21%), Positives = 221/508 (43%), Gaps = 107/508 (21%)
Query: 116 DVVAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQLF 171
+VV +++G+ K G +D A ++F M +R + ++++LI GYF+ G +LF
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 172 DQMSER----SVVTWTTMVSGFAQNGLVDHARRFFDLM----PEKNTIAWTAMVKSYLDN 223
Q + VV +++ + + ++G + A + M N + +T ++K +
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 224 GQFSEGYKLFLEMPER----NVRSWNVMISGCLSANRVDEAIHLFETM------PDRNHV 273
G+ E + ++ ++ +R ++ +++ +I G + L+E M PD V
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV--V 462
Query: 274 SWTAMVSGLAQNKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEKN 333
+ +V GL++ ++ A ++ K+LG+++ L N
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRF--------------------SVKMLGQSIRL-------N 495
Query: 334 VGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSII-------TSCDGM---- 382
V ++N++IDG+ R EAL++F LM +P V T T+++ C M
Sbjct: 496 VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTI 555
Query: 383 ----VEIMQAHAM---------VIHLGF--------------------EQNTWVTNALIT 409
++MQ + + VIHL F E + N +I
Sbjct: 556 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 615
Query: 410 LYSKSGDLCSAMLVFELLK----SKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKP 465
Y L A +FELLK + V+ T +I + A+++F+ M G+KP
Sbjct: 616 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKP 675
Query: 466 DEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDV 525
+ +T+ L+ S + + ++F+ ++ ++ + YS ++D L + G V+EA ++
Sbjct: 676 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQ-EKGISPSIVSYSIIIDGLCKRGRVDEATNI 734
Query: 526 V-----STIPPSEIDEAVLVALLGACKL 548
+ + P + A+L+ G CK+
Sbjct: 735 FHQAIDAKLLPDVVAYAILIR--GYCKV 760
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 106/488 (21%), Positives = 199/488 (40%), Gaps = 86/488 (17%)
Query: 77 LFDEMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSER----DVVAQSAMVDGYAKAGR 132
+ D P + V++ ++I + K ++ A +FK M +R D++A S ++DGY KAG
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 133 LDNAREVFDNMTER---------------------------------------NAFSWTS 153
L ++F + N ++T
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 154 LISGYFRCGRTEEALQLFDQMSER----SVVTWTTMVSGFAQNGLVDHARRFFDLMPE-- 207
LI G + GR EA ++ Q+ +R S+VT+++++ GF + G + ++ M +
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 208 --KNTIAWTAMVKSYLDNGQFSEGYKLFLEMPERNVR----SWNVMISGCLSANRVDEAI 261
+ + + +V G + ++M +++R +N +I G NR DEA+
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 262 HLFETM------PDRNHVSWTAMVS----GLAQNKMVEVARKYFDIMPFK----DMAAWS 307
+F M PD + VS ++ + + FD+M D+A +
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCN 576
Query: 308 AMITAYVDEKLLGEALELF-NLVP---EKNVGIWNTIIDGYVRNGEAGEALRLFILMLRS 363
+I + +A + F NL+ E ++ +NT+I GY EA R+F L+ +
Sbjct: 577 VVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVT 636
Query: 364 CFRPCVTTMTSII------TSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDL 417
F P T+T +I DG + + A G + N L+ +SKS D+
Sbjct: 637 PFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA---EKGSKPNAVTYGCLMDWFSKSVDI 693
Query: 418 CSAMLVFELLKSK----DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGL 473
+ +FE ++ K +VS++ +I G A +F + + + PD + + L
Sbjct: 694 EGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAIL 753
Query: 474 LSACSHAG 481
+ G
Sbjct: 754 IRGYCKVG 761
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 137/276 (49%), Gaps = 32/276 (11%)
Query: 67 RRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSERDV----V 118
R+G +K A LFDE+ ++ + +Y ++I K ++ AE + M + V V
Sbjct: 341 RKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQV 400
Query: 119 AQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQ-LFDQ 173
+ ++DGY + G +D A ++D M ++ + F+ ++ S + R R +EA Q LF
Sbjct: 401 VFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM 460
Query: 174 MS---ERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQF 226
M + S V++T ++ + + G V+ A+R F M K N I + M+ +Y G+
Sbjct: 461 MEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKI 520
Query: 227 SEGYKLFLEMP----ERNVRSWNVMISGCLSANRVDEAIHLFETMP----DRNHVSWTAM 278
E KL M + + ++ +I G A+ VDEA+ LF M D+N V++T M
Sbjct: 521 KEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVM 580
Query: 279 VSGLAQNKMVEVARKYFDIMPFK----DMAAWSAMI 310
+SGL++ + A +D M K D ++A+I
Sbjct: 581 ISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 172/418 (41%), Gaps = 108/418 (25%)
Query: 25 HRRRVFSQCQPIFRFLRNFTASISISHDWSLRKRNVEITILGRRGKLKEARKLFDEMPQR 84
+RR C IFR + + I++ +SL + + L RRG++++++KL E +
Sbjct: 200 KKRRRIDLCLEIFRRMVDSGVKITV---YSL---TIVVEGLCRRGEVEKSKKLIKEFSVK 253
Query: 85 ----DAVSYNSMIAVYLKNKDVHGAETIFKAMSERDV----VAQSAMVDGYAKAGRLDNA 136
+A +YN++I Y+K +D G E + K M + V V + +++ K G++ +A
Sbjct: 254 GIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDA 313
Query: 137 REVFDNMTERNAFS----WTSLISGYFRCGRTEEALQLFDQMSERSV------------- 179
++FD M ER S +TSLIS R G + A LFD+++E+ +
Sbjct: 314 EKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDG 373
Query: 180 --------------------------VTWTTMVSGFAQNGLVDHARRFFDLMPEK----- 208
V + T++ G+ + G+VD A +D+M +K
Sbjct: 374 VCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQAD 433
Query: 209 ----------------------------------NTIAWTAMVKSYLDNGQFSEGYKLFL 234
+T+++T ++ Y G E +LF+
Sbjct: 434 VFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFV 493
Query: 235 EMPERNVR----SWNVMISGCLSANRVDEAIHLFETMP----DRNHVSWTAMVSGLAQNK 286
EM + V+ ++NVMI ++ EA L M D + ++T+++ G
Sbjct: 494 EMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIAD 553
Query: 287 MVEVARKYFDIMPFKDM----AAWSAMITAYVDEKLLGEALELFNLVPEKNVGIWNTI 340
V+ A + F M K + ++ MI+ EA L++ + K I N +
Sbjct: 554 NVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKV 611
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/431 (21%), Positives = 178/431 (41%), Gaps = 82/431 (19%)
Query: 129 KAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----V 180
K R+D E+F M + +S T ++ G R G E++ +L + S + +
Sbjct: 201 KRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAY 260
Query: 181 TWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFSEGYKLFLEM 236
T+ T+++ + + +M + N + +T +++ + NG+ S+ KLF EM
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
Query: 237 PERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSGLAQNKMVEVARKYFD 296
ER + S +H++ ++ +SW + + ++ FD
Sbjct: 321 RERGIES----------------DVHVYTSL-----ISWNCRKGNMKRAFLL------FD 353
Query: 297 IMPFKDMA----AWSAMITAYVDEKLLGEALELFNLVPEKNVGI----WNTIIDGYVRNG 348
+ K ++ + A+I +G A L N + K V I +NT+IDGY R G
Sbjct: 354 ELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKG 413
Query: 349 EAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALI 408
EA ++ +M + F+ V T +I SC ++ E W+
Sbjct: 414 MVDEASMIYDVMEQKGFQADVFTCNTI-ASCFNRLKRYD----------EAKQWL----- 457
Query: 409 TLYSKSGDLCSAMLVFELLKSK---DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKP 465
F +++ VS+T +I Y G+ A ++F M + G +P
Sbjct: 458 ---------------FRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQP 502
Query: 466 DEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDV 525
+ IT+ ++ A G + + R++ +++ A ++ Y+ L+ A V+EAM +
Sbjct: 503 NAITYNVMIYAYCKQGKIKEARKLRANME-ANGMDPDSYTYTSLIHGECIADNVDEAMRL 561
Query: 526 VSTIPPSEIDE 536
S + +D+
Sbjct: 562 FSEMGLKGLDQ 572
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 83/168 (49%), Gaps = 19/168 (11%)
Query: 22 CYHHRRRVFSQCQPIFRFLRNFTASISISHDWSLRKRNVEITILGRRGKLKEARKLFDEM 81
C++ +R Q +FR + ++S+ N+ I + + G ++EA++LF EM
Sbjct: 443 CFNRLKRYDEAKQWLFRMMEGGVKLSTVSYT------NL-IDVYCKEGNVEEAKRLFVEM 495
Query: 82 P----QRDAVSYNSMIAVYLKNKDVHGAETIFKAMS----ERDVVAQSAMVDGYAKAGRL 133
Q +A++YN MI Y K + A + M + D ++++ G A +
Sbjct: 496 SSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNV 555
Query: 134 DNAREVFDNM----TERNAFSWTSLISGYFRCGRTEEALQLFDQMSER 177
D A +F M ++N+ ++T +ISG + G+++EA L+D+M +
Sbjct: 556 DEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRK 603
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 186/452 (41%), Gaps = 67/452 (14%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSE 114
N+ I + GK++EAR+ +M + S+N +I Y K A + M
Sbjct: 277 NILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLN 336
Query: 115 RDVVAQSAMVDGYAKA----GRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQL 170
+ ++ + Y A GR+D+ARE+ +M + S+ +L+ GY + G+ EA L
Sbjct: 337 AGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLL 396
Query: 171 FDQMS----ERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLD 222
FD + S+VT+ T++ G ++G ++ A+R + M + + I +T +VK ++
Sbjct: 397 FDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVK 456
Query: 223 NGQFSEGYKLFLEMPERNVR----SWNVMISGCLSANRVDEAIHLFETMPDRNHVS---- 274
NG S +++ EM + ++ ++ G L D+A L E M +H +
Sbjct: 457 NGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLT 516
Query: 275 -WTAMVSGLAQ----NKMVEVARKYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLV 329
+ + GL + K +E RK F + LV
Sbjct: 517 IYNVRIDGLCKVGNLVKAIEFQRKIFRV-----------------------------GLV 547
Query: 330 PEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAH 389
P+ + T+I GY+ NG+ A L+ MLR P V T +I + QA
Sbjct: 548 PDHVT--YTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAF 605
Query: 390 AMVIHL---GFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDV----VSWTAMIVAY 442
+ G N NAL+ K+G++ A ++ + + S+T +I
Sbjct: 606 QYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKN 665
Query: 443 ANHGHGHHALQVFARMVTSGTKPDEITFVGLL 474
+ ++++ M+ +PD T L
Sbjct: 666 CDFEKWEEVVKLYKEMLDKEIEPDGYTHRALF 697
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/435 (20%), Positives = 190/435 (43%), Gaps = 36/435 (8%)
Query: 90 NSMIAVYLKNKDVHGAETIFKAMSER----DVVAQSAMVDGYAKAGRLDNAREVFDNMTE 145
N ++ V ++ ++ A +++ M E V+ + M+D KAG L+ +++ M
Sbjct: 207 NIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKR 266
Query: 146 RN----AFSWTSLISGYFRCGRTEEALQLFDQMSERSVV----TWTTMVSGFAQNGLVDH 197
RN ++ LI+G+ + G+ EEA + M ++ ++ G+ + GL D
Sbjct: 267 RNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDD 326
Query: 198 ARRFFDLMPEKNTIAWTAMVKSYL----DNGQFSEGYKLFLEMPERNVRSWNVMISGCLS 253
A D M T+ Y+ D G+ + +L M +V S+N ++ G +
Sbjct: 327 AWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIK 386
Query: 254 ANRVDEAIHLFETMP----DRNHVSWTAMVSGLAQNKMVEVARKYFDIMP----FKDMAA 305
+ EA LF+ + + V++ ++ GL ++ +E A++ + M F D+
Sbjct: 387 MGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVIT 446
Query: 306 WSAMITAYVDEKLLGEALELFNLVPEKNVG----IWNTIIDGYVRNGEAGEALRLFILML 361
++ ++ +V L A E+++ + K + + T G +R G++ +A RL M+
Sbjct: 447 YTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMV 506
Query: 362 RSCFRPCVTTMTSI----ITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSKSGDL 417
+ T+ ++ + +V+ ++ + +G + +I Y ++G
Sbjct: 507 ATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQF 566
Query: 418 CSAMLVF-ELLKSK---DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGL 473
A ++ E+L+ + V+++ +I +A G A Q M G +P+ +T L
Sbjct: 567 KMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNAL 626
Query: 474 LSACSHAGLVNQGRR 488
L AG +++ R
Sbjct: 627 LYGMCKAGNIDEAYR 641
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/447 (21%), Positives = 186/447 (41%), Gaps = 40/447 (8%)
Query: 133 LDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTT 184
++ A V++ M E ++ +++ F+ G E +++ +M R++ VT+
Sbjct: 219 MNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNI 278
Query: 185 MVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFSEGYKLFLEMPERN 240
+++GF++NG ++ ARRF M ++ +++ Y G F + + + EM
Sbjct: 279 LINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAG 338
Query: 241 V----RSWNVMISGCLSANRVDEAIHLFETMPDRNHVSWTAMVSG-LAQNKMVEVARKYF 295
+ ++N+ I R+D+A L +M + VS+ ++ G + K VE A F
Sbjct: 339 IYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVE-ASLLF 397
Query: 296 DIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEK--------NVGIWNTIIDGYVRN 347
D + D+ +D LE + E+ +V + T++ G+V+N
Sbjct: 398 DDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKN 457
Query: 348 GEAGEALRLFILMLRSCFRP----CVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWV 403
G A ++ MLR +P T + D MV + +
Sbjct: 458 GNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTI 517
Query: 404 TNALITLYSKSGDLCSAM----LVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMV 459
N I K G+L A+ +F + D V++T +I Y +G A ++ M+
Sbjct: 518 YNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEML 577
Query: 460 TSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLV 519
P IT+ L+ + AG + Q + +K + V ++ L+ + +AG +
Sbjct: 578 RKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKR-GVRPNVMTHNALLYGMCKAGNI 636
Query: 520 NEAMDVVST-----IPPSEIDEAVLVA 541
+EA + IPP++ +L++
Sbjct: 637 DEAYRYLCKMEEEGIPPNKYSYTMLIS 663
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/460 (20%), Positives = 205/460 (44%), Gaps = 48/460 (10%)
Query: 67 RRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGA---ETIFKAMSERDVVA 119
R G E+ L + M ++ D + +I + +++ A I + + DV A
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFA 160
Query: 120 QSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQLFDQM- 174
+A+++G+ K R+D+A V D M + + ++ +I G+ + AL++ +Q+
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 175 ---SERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEK----NTIAWTAMVKSYLDNGQFS 227
+ +V+T+T ++ G VD A + D M + + + +++ G
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 228 EGYKLF----LEMPERNVRSWNVMISGCLSANRVDEA----IHLFETMPDRNHVSWTAMV 279
+++ L+ E +V S+N+++ L+ + +E +F D N V+++ ++
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 280 SGLAQNKMVEVARKYFDIMPFK----DMAAWSAMITAYVDEKLLGEALELFNLVPE---- 331
+ L ++ +E A +M K D ++ +I A+ E L A+E +
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 400
Query: 332 KNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAM 391
++ +NT++ +NG+A +AL +F + P ++ ++ ++ + ++A M
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHM 460
Query: 392 VIHL---GFEQNTWVTNALITLYSKSGDLCSAMLVFELLKS-------KDVVSWTAMIVA 441
++ + G + + N++I+ + G + A FELL VV++ +++
Sbjct: 461 ILEMMSNGIDPDEITYNSMISCLCREGMVDEA---FELLVDMRSCEFHPSVVTYNIVLLG 517
Query: 442 YANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAG 481
+ A+ V MV +G +P+E T+ L+ AG
Sbjct: 518 FCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG 557
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/428 (21%), Positives = 196/428 (45%), Gaps = 36/428 (8%)
Query: 152 TSLISGYFRCGRTEEA---LQLFDQMSERSVVTWTTMVSGFAQNGLVDHARRFFDLMPEK 208
T LI G+F +A +++ ++ + V + +++GF + +D A R D M K
Sbjct: 128 TKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSK 187
Query: 209 N----TIAWTAMVKSYLDNGQFSEGYKLFLEMPERN----VRSWNVMISGCLSANRVDEA 260
+ T+ + M+ S G+ K+ ++ N V ++ ++I + VDEA
Sbjct: 188 DFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEA 247
Query: 261 IHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIMPFK----DMAAWSAMITA 312
+ L + M R + ++ ++ G+ + MV+ A + + K D+ +++ ++ A
Sbjct: 248 LKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRA 307
Query: 313 YVDEKLL--GEAL--ELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPC 368
+++ GE L ++F+ + NV ++ +I R+G+ EA+ L LM P
Sbjct: 308 LLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPD 367
Query: 369 VTTMTSIITS-C-DGMVEI-MQAHAMVIHLGFEQNTWVTNALITLYSKSGDLCSAMLVF- 424
+ +I + C +G +++ ++ +I G + N ++ K+G A+ +F
Sbjct: 368 AYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFG 427
Query: 425 ---ELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITFVGLLSACSHAG 481
E+ S + S+ M A + G AL + M+++G PDEIT+ ++S G
Sbjct: 428 KLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREG 487
Query: 482 LVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLGRAGLVNEAMDVVSTI-----PPSEIDE 536
+V++ + ++ + V Y+ ++ +A + +A++V+ ++ P+E
Sbjct: 488 MVDEAFELLVDMRSC-EFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTY 546
Query: 537 AVLVALLG 544
VL+ +G
Sbjct: 547 TVLIEGIG 554
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 169/380 (44%), Gaps = 37/380 (9%)
Query: 147 NAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQNGLVDHARRFF 202
N +++ L+ G ++ GRT +A ++FD M+ R + VT+T ++SG Q G D AR+ F
Sbjct: 197 NLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLF 256
Query: 203 DLMPEK----NTIAWTAMVKSYLDNGQFSEGYKLFLEMPERN-----VRSWNVMISGCLS 253
M +++A A++ + G+ E ++L L + E++ +R ++ +I G
Sbjct: 257 YEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFEL-LRLFEKDGFVLGLRGYSSLIDGLFR 315
Query: 254 ANRVDEAIHLFETMPDRNH----VSWTAMVSGLAQNKMVEVARKYFDIMPFK----DMAA 305
A R +A L+ M +N + +T ++ GL++ +E A K MP K D
Sbjct: 316 ARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYC 375
Query: 306 WSAMITAYVDEKLLGEA----LELFNLVPEKNVGIWNTIIDGYVRNGEAGEALRLFILML 361
++A+I A LL E LE+ + +I RNG EA +F +
Sbjct: 376 YNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIE 435
Query: 362 RSCFRPCVTTMTSIITSCDGMVEIMQAHAMV--IHLG-----FEQNTWVTNALITLYSKS 414
+S P V T ++I E+ +A ++ + +G F + + N +S
Sbjct: 436 KSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVES 495
Query: 415 GDLCSAMLVF----ELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDEITF 470
G + A + S D+VS+ +I + G AL++ + G PD +T+
Sbjct: 496 GSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTY 555
Query: 471 VGLLSACSHAGLVNQGRRVF 490
L++ G + ++F
Sbjct: 556 NTLINGLHRVGREEEAFKLF 575
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 194/433 (44%), Gaps = 54/433 (12%)
Query: 69 GKLKEARKLFDEMPQRDAVSYNSMIAVYLKNK-----DVHGAETIFKAMSERDVVAQSAM 123
G++KE FD P D +YN ++ V ++ + + K ++ +
Sbjct: 151 GRMKE----FDCRP--DVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGIL 204
Query: 124 VDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQLFDQMSER-- 177
+DG K GR +A+++FD+MT R N ++T LISG + G ++A +LF +M
Sbjct: 205 MDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGN 264
Query: 178 --SVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTI----AWTAMVKSYLDNGQFSEGYK 231
V ++ GF + G + A L + + +++++ ++++ ++
Sbjct: 265 YPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFE 324
Query: 232 LFLEMPERNVRS----WNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLA 283
L+ M ++N++ + ++I G A ++++A+ L +MP + + + A++ L
Sbjct: 325 LYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALC 384
Query: 284 QNKMVEVAR----KYFDIMPFKDMAAWSAMITAYVDEKLLGEALELFNLVPEK----NVG 335
++E R + + F D + +I + L+ EA E+F + + +V
Sbjct: 385 GRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVA 444
Query: 336 IWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMT---SIITSCDGMVE---IMQAH 389
+N +IDG ++GE EA L M RP + S S D MVE I++A+
Sbjct: 445 TFNALIDGLCKSGELKEARLLLHKM--EVGRPASLFLRLSHSGNRSFDTMVESGSILKAY 502
Query: 390 AMVIHL---GFEQNTWVTNALITLYSKSGDLCSAMLVFELLK----SKDVVSWTAMIVAY 442
+ H G + N LI + ++GD+ A+ + +L+ S D V++ +I
Sbjct: 503 RDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGL 562
Query: 443 ANHGHGHHALQVF 455
G A ++F
Sbjct: 563 HRVGREEEAFKLF 575
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 127/321 (39%), Gaps = 42/321 (13%)
Query: 59 NVEITILGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIF----K 110
N I L RG L+E R L EM + DA ++ +I +N V AE IF K
Sbjct: 377 NAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEK 436
Query: 111 AMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYFRCGRTEEALQL 170
+ V +A++DG K+G L AR + M GR L
Sbjct: 437 SGCSPSVATFNALIDGLCKSGELKEARLLLHKM----------------EVGRPA---SL 477
Query: 171 FDQMSERSVVTWTTMV-SGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSEG 229
F ++S ++ TMV SG D A F D + +++ ++ + G
Sbjct: 478 FLRLSHSGNRSFDTMVESGSILKAYRDLAH-FADTGSSPDIVSYNVLINGFCRAGDIDGA 536
Query: 230 YKLF----LEMPERNVRSWNVMISGCLSANRVDEAIHLFETMPDRNH--VSWTAMVSGLA 283
KL L+ + ++N +I+G R +EA LF D H + ++++
Sbjct: 537 LKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSC 596
Query: 284 QNKMVEVA----RKYFDIMPFKDMAAWSAMITAYVD---EKLLGEALELFNLVPEKNVGI 336
+ + V VA KY + D + + + + E+ L +EL E +G
Sbjct: 597 RKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGP 656
Query: 337 WNTIIDGYVRNGEAGEALRLF 357
+ + G ++G EAL +F
Sbjct: 657 YTIWLIGLCQSGRFHEALMVF 677
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 202/471 (42%), Gaps = 81/471 (17%)
Query: 71 LKEARKLFD---EMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERD----VVAQSAM 123
+E K++D E+ ++ +Y++++ + + + A + +D VV+ +++
Sbjct: 169 FRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSI 228
Query: 124 VDGYAKAGRLDNAREVFDNMTE----RNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV 179
+ GY K G +D A+ F + + + +S LI+G G EAL+L M++ V
Sbjct: 229 MSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGV 288
Query: 180 ----VTWTTMVSGFAQNGLVDHA----RRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYK 231
VT+ + GF G++ A R D + I +T ++ G G
Sbjct: 289 EPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLV 348
Query: 232 LFLEMPER-----NVRSWNVMISGCLSANRVDEAIHLFETM------PDRNHVSWTAMVS 280
L +M R ++ +VM+SG R+DEA+ LF M PD V+++ ++
Sbjct: 349 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDL--VAYSIVIH 406
Query: 281 GLAQNKMVEVARKYFDIMPFKDMAAWS----AMITAYVDEKLLGEALELFNLVPEK---- 332
GL + ++A +D M K + S A++ + +L EA L + +
Sbjct: 407 GLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL 466
Query: 333 NVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMV 392
++ ++N +IDGY ++G EAL LF +++ + P V T
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATF-------------------- 506
Query: 393 IHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLK----SKDVVSWTAMIVAYANHGHG 448
N+LI Y K+ ++ A + +++K + VVS+T ++ AYAN G+
Sbjct: 507 ------------NSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNT 554
Query: 449 HHALQVFARMVTSGTKPDEIT----FVGLLSACSHAGLVNQGR-RVFDSIK 494
++ M G P +T F GL H + R R+F+ K
Sbjct: 555 KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCK 605
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 202/471 (42%), Gaps = 81/471 (17%)
Query: 71 LKEARKLFD---EMPQRDAVSYNSMIAVYLKNKDVHGAETIFKAMSERD----VVAQSAM 123
+E K++D E+ ++ +Y++++ + + + A + +D VV+ +++
Sbjct: 169 FRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSI 228
Query: 124 VDGYAKAGRLDNAREVFDNMTE----RNAFSWTSLISGYFRCGRTEEALQLFDQMSERSV 179
+ GY K G +D A+ F + + + +S LI+G G EAL+L M++ V
Sbjct: 229 MSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGV 288
Query: 180 ----VTWTTMVSGFAQNGLVDHA----RRFFDLMPEKNTIAWTAMVKSYLDNGQFSEGYK 231
VT+ + GF G++ A R D + I +T ++ G G
Sbjct: 289 EPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLV 348
Query: 232 LFLEMPER-----NVRSWNVMISGCLSANRVDEAIHLFETM------PDRNHVSWTAMVS 280
L +M R ++ +VM+SG R+DEA+ LF M PD V+++ ++
Sbjct: 349 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDL--VAYSIVIH 406
Query: 281 GLAQNKMVEVARKYFDIMPFKDMAAWS----AMITAYVDEKLLGEALELFNLVPEK---- 332
GL + ++A +D M K + S A++ + +L EA L + +
Sbjct: 407 GLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL 466
Query: 333 NVGIWNTIIDGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMV 392
++ ++N +IDGY ++G EAL LF +++ + P V T
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATF-------------------- 506
Query: 393 IHLGFEQNTWVTNALITLYSKSGDLCSAMLVFELLK----SKDVVSWTAMIVAYANHGHG 448
N+LI Y K+ ++ A + +++K + VVS+T ++ AYAN G+
Sbjct: 507 ------------NSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNT 554
Query: 449 HHALQVFARMVTSGTKPDEIT----FVGLLSACSHAGLVNQGR-RVFDSIK 494
++ M G P +T F GL H + R R+F+ K
Sbjct: 555 KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCK 605
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 184/412 (44%), Gaps = 61/412 (14%)
Query: 85 DAVSYNSMIAVYLK-NKDVHGAETIFKAMS---ERDVVAQSAMVDGYAKAGRLDNAREVF 140
D SYN +I + ++ V + K M E DVV S++++G+ + R+ +A ++
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 141 DNMTER----NAFSWTSLISGYFRCGRTEEALQLFDQMSERSV----VTWTTMVSGFAQN 192
M E + + ++I G + G +A++LFD+M V VT+ ++V+G +
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 193 GLVDHARRFF------DLMPEKNTIAWTAMVKSYLDNGQFSEGYKLFLEMPER----NVR 242
G A R D++P N I +TA++ ++ G+FSE KL+ EM R +V
Sbjct: 223 GRWSDAARLMRDMVMRDIVP--NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 280
Query: 243 SWNVMISGCLSANRVDEAIHLFETMPDR----NHVSWTAMVSGLAQNKMVEVARKYFDIM 298
++N +I+G RVDEA + + M + + V++ +++G ++K V+ K F M
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Query: 299 PFK----DMAAWSAMITAYVDEKLLGEALELFNLVPEK-NVGIWNTIIDGYVRNGEAGEA 353
+ D ++ +I Y A E+F+ + + N+ ++ ++ G N +A
Sbjct: 341 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKA 400
Query: 354 LRLFILMLRSCFRPCVTTMTSIITSCDGMVEIMQAHAMVIHLGFEQNTWVTNALITLYSK 413
L LF M +S +TT +I H M +G ++ W
Sbjct: 401 LVLFENMQKSEIELDITTYNIVI------------HGMC-KIGNVEDAW----------- 436
Query: 414 SGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKP 465
DL ++ L DVVS+T MI + + ++ +M G P
Sbjct: 437 --DLFRSLSCKGL--KPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 117/244 (47%), Gaps = 48/244 (19%)
Query: 62 ITILGRRGKLKEARKLFDEMPQR----DAVSYNSMIAVYLKNKDVHGAETIFKAMSER-- 115
I + + GK EA KL++EM +R D +YNS+I + V A+ + M +
Sbjct: 251 IDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 310
Query: 116 --DVVAQSAMVDGYAKAGRLDNAREVFDNMTER----NAFSWTSLISGYFRCGRTEEALQ 169
DVV + +++G+ K+ R+D ++F M +R + ++ ++I GYF+ GR + A +
Sbjct: 311 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQE 370
Query: 170 LFDQMSER-SVVTWTTMVSGFAQNGLVDHARRFFDLMPEKNTIAWTAMVKSYLDNGQFSE 228
+F +M R ++ T++ ++ G N V+ A F +N Q SE
Sbjct: 371 IFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLF-------------------ENMQKSE 411
Query: 229 GYKLFLEMPERNVRSWNVMISGCLSANRVDEAIHLFETM------PDRNHVSWTAMVSGL 282
E ++ ++N++I G V++A LF ++ PD VS+T M+SG
Sbjct: 412 --------IELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPD--VVSYTTMISGF 461
Query: 283 AQNK 286
+ +
Sbjct: 462 CRKR 465
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 149/349 (42%), Gaps = 59/349 (16%)
Query: 302 DMAAWSAMITAYVDEKLLGEALELFNLVPE----KNVGIWNTIIDGYVRNGEAGEALRLF 357
D+ S++I + + +A++L + + E +V I+NTIIDG + G +A+ LF
Sbjct: 138 DVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELF 197
Query: 358 ILMLRSCFRPCVTTMTSIIT--SCDG----MVEIMQAHAMVIHLGFEQNTWVTNALITLY 411
M R R T S++ C G +M+ M N A+I ++
Sbjct: 198 DRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVM---RDIVPNVITFTAVIDVF 254
Query: 412 SKSGDLCSAMLVFELLKSK----DVVSWTAMIVAYANHGHGHHALQVFARMVTSGTKPDE 467
K G AM ++E + + DV ++ ++I HG A Q+ MVT G PD
Sbjct: 255 VKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV 314
Query: 468 ITFVGLLSACSHAGLVNQGRRVF----------DSIKGAYNLNLK--------------- 502
+T+ L++ + V++G ++F D+I YN ++
Sbjct: 315 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTI--TYNTIIQGYFQAGRPDAAQEIF 372
Query: 503 --------VEHYSCLVDMLGRAGLVNEAMDVVSTIPPSEIDEAVL---VALLGACKLHGN 551
+ YS L+ L V +A+ + + SEI+ + + + G CK+ GN
Sbjct: 373 SRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKI-GN 431
Query: 552 IKVANSIGQKL--LSLEPTSSGGYVLLSNAYAAEEQWDEFAQVRKRMKE 598
++ A + + L L+P Y + + + + QWD+ + ++M+E
Sbjct: 432 VEDAWDLFRSLSCKGLKPDVV-SYTTMISGFCRKRQWDKSDLLYRKMQE 479
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 151/324 (46%), Gaps = 26/324 (8%)
Query: 342 DGYVRNGEAGEALRLFILMLRSCFRPCVTTMTSIITSC---DGMVEIMQAH----AMVIH 394
D + ++G+ +AL ++ + ++ + + C +G+ E H A V H
Sbjct: 227 DAFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSH 286
Query: 395 LGFEQNTWVTNALITLYSKSGDLCSAMLVFELLKSKDVVSWTAMIVAYANHGHGHHALQV 454
L N + L+ +YS G A VFE + K++ +W +I +A +G G A+ +
Sbjct: 287 LDLSSN----HVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDM 342
Query: 455 FARMVTSGTKPDEITFVGLLSACSHAGLVNQGRRVFDSIKGAYNLNLKVEHYSCLVDMLG 514
F+R G PD F G+ AC G V++G F+S+ Y + +E Y LV+M
Sbjct: 343 FSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYA 402
Query: 515 RAGLVNEAMDVVSTIPPSEIDEAVLVALLGACKLHGNIKVANSIGQKLLSLEPTSSGGYV 574
G ++EA++ V + P E + V L+ ++HGN+++ + + + L+PT
Sbjct: 403 LPGFLDEALEFVERM-PMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTR----- 456
Query: 575 LLSNAYAAEEQWDEFAQVRKRMKEK-NVKKISGFSQIQVKGKNHLFFVGERSHPQVEEIY 633
++ + F V+ EK ++KK SG VK F G+ + P+ +E++
Sbjct: 457 ------LNKQSREGFIPVKASDVEKESLKKRSGILH-GVKSSMQEFRAGDTNLPENDELF 509
Query: 634 GFLQQSLQPLMRETGYTPENSLLI 657
L ++L+ M E GY E + +
Sbjct: 510 QLL-RNLKMHMVEVGYVAETRMAL 532
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 12/160 (7%)
Query: 100 KDVHGAETIFKAMSERDVVAQSAMVDGYAKAGRLDNAREVFDNMTERNAFSWTSLISGYF 159
K VHG I ++S D+ + +++ Y+ G + A VF+ M+E+N +W +I +
Sbjct: 274 KTVHG--KISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFA 331
Query: 160 RCGRTEEALQLFDQMSERSVVTWTTMVSGF----AQNGLVDHARRFFDLMPEKNTIA--- 212
+ G E+A+ +F + E + + G G VD F+ M IA
Sbjct: 332 KNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSI 391
Query: 213 --WTAMVKSYLDNGQFSEGYKLFLEMP-ERNVRSWNVMIS 249
+ ++V+ Y G E + MP E NV W +++
Sbjct: 392 EDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMN 431