Miyakogusa Predicted Gene

Lj6g3v1694950.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1694950.1 CUFF.59798.1
         (230 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G52155.1 | Symbols:  | Phosphoglycerate mutase family protein...   244   3e-65

>AT3G52155.1 | Symbols:  | Phosphoglycerate mutase family protein |
           chr3:19343740-19344722 FORWARD LENGTH=218
          Length = 218

 Score =  244 bits (624), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 118/177 (66%), Positives = 137/177 (77%)

Query: 54  SDSVSRRLILLRHAQSSWGNPSLRDPDRPLSKSGKEDAMKVSSKLQQLGWIPELILCSDA 113
           S S+SRRLILLRHA SSW + SLRD DRPLSK+G+ DA KV+  L  LGW+P+LIL SDA
Sbjct: 38  STSISRRLILLRHAHSSWDDLSLRDHDRPLSKTGEADAAKVAQILSSLGWLPQLILSSDA 97

Query: 114 TRTKETLKIMXXXXXXXXXXXXHFVSSFYSIAAMDGQTADHLQKIICKYSRDDILTIMCM 173
           TRT+ETLK M            HF+ SFYSIAAMDGQTA+HLQ II KYS  DI TIMCM
Sbjct: 98  TRTRETLKSMQAQVDGFMEANVHFIPSFYSIAAMDGQTAEHLQNIISKYSTPDISTIMCM 157

Query: 174 GHNRGWEEAASMFSGGSVELKTCNAALLETAGKSWDEAFAAAGFGGWQLQGIVKPRS 230
           GHN+GWEEAASM SG S++LKTCNAALL+  G SW+EAFA +G GGW+L+G+V P S
Sbjct: 158 GHNKGWEEAASMLSGASIKLKTCNAALLQAFGNSWEEAFALSGPGGWKLEGLVAPDS 214