Miyakogusa Predicted Gene

Lj6g3v1693490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1693490.1 Non Chatacterized Hit- tr|B4FL82|B4FL82_MAIZE
Uncharacterized protein OS=Zea mays PE=4
SV=1,48.48,5e-17,UNCHARACTERIZED,NULL; seg,NULL; SNARE_assoc,SNARE
associated Golgi protein,NODE_41345_length_1180_cov_77.446609.path2.1
         (314 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G02370.2 | Symbols:  | SNARE associated Golgi protein family ...   375   e-104
AT2G02370.1 | Symbols:  | SNARE associated Golgi protein family ...   375   e-104
AT1G12450.1 | Symbols:  | SNARE associated Golgi protein family ...   213   1e-55
AT4G22850.1 | Symbols:  | SNARE associated Golgi protein family ...   205   3e-53
AT4G12000.1 | Symbols:  | SNARE associated Golgi protein family ...   201   5e-52
AT4G22850.2 | Symbols:  | SNARE associated Golgi protein family ...   183   1e-46
AT1G03260.1 | Symbols:  | SNARE associated Golgi protein family ...    73   3e-13
AT5G19070.1 | Symbols:  | SNARE associated Golgi protein family ...    62   6e-10
AT1G22850.1 | Symbols:  | SNARE associated Golgi protein family ...    62   7e-10

>AT2G02370.2 | Symbols:  | SNARE associated Golgi protein family |
           chr2:621841-623084 FORWARD LENGTH=320
          Length = 320

 Score =  375 bits (963), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 179/273 (65%), Positives = 208/273 (76%)

Query: 25  SSEYVRLVISDEPRAVETEMIQPREESRINSFRWWMKVLLWCLASXXXXXXXXXXXXPFV 84
            +EYVRLV++ E    ET +   + E +   F WW+K L  C  +            PFV
Sbjct: 21  DNEYVRLVVAHEASPAETVLSLSQSEVQSKKFMWWLKALGICAVALLLTLVFGKWGVPFV 80

Query: 85  FEKILYPTMEWEATAFGRPXXXXXXXXXXXXFPVILFPSGPSMWLAGMIFGYGLGFVIIM 144
           F+K+L P ++WEATAFGRP            FPV L PSGPSMWLAGMIFGYGLGFVIIM
Sbjct: 81  FQKVLIPILQWEATAFGRPMLAIVLVVSLALFPVFLIPSGPSMWLAGMIFGYGLGFVIIM 140

Query: 145 VGTTIGMVLPYLIGLLFRDRIHQWLKKWPQNAEMIRLAGEGSWFHQFQMVALFRISPFPY 204
           VGTTIGMVLPYLIGL+FRDR+HQWLK+WP+ A ++RLA EGSWFHQF++VA+FR+SPFPY
Sbjct: 141 VGTTIGMVLPYLIGLMFRDRLHQWLKRWPRQAAVLRLAAEGSWFHQFRVVAIFRVSPFPY 200

Query: 205 TIFNYAIVVTNMRFWPYLCGSIAGMVPEAFLYIYSGRLIRTLADAQYGKHHLTTVEIVYN 264
           TIFNYAIVVT+MRFWPY  GSIAGM+PEAF+YIYSGRLIRT AD QYG   LTTVEIVYN
Sbjct: 201 TIFNYAIVVTSMRFWPYFFGSIAGMIPEAFIYIYSGRLIRTFADVQYGHQRLTTVEIVYN 260

Query: 265 IISFIIAVVTIVGFTVYAKRTLNELKMAEANEE 297
           +IS +IAVVT V FTVYAKR L EL+ AEANE+
Sbjct: 261 VISLVIAVVTTVAFTVYAKRALRELQNAEANED 293


>AT2G02370.1 | Symbols:  | SNARE associated Golgi protein family |
           chr2:621841-623084 FORWARD LENGTH=320
          Length = 320

 Score =  375 bits (963), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 179/273 (65%), Positives = 208/273 (76%)

Query: 25  SSEYVRLVISDEPRAVETEMIQPREESRINSFRWWMKVLLWCLASXXXXXXXXXXXXPFV 84
            +EYVRLV++ E    ET +   + E +   F WW+K L  C  +            PFV
Sbjct: 21  DNEYVRLVVAHEASPAETVLSLSQSEVQSKKFMWWLKALGICAVALLLTLVFGKWGVPFV 80

Query: 85  FEKILYPTMEWEATAFGRPXXXXXXXXXXXXFPVILFPSGPSMWLAGMIFGYGLGFVIIM 144
           F+K+L P ++WEATAFGRP            FPV L PSGPSMWLAGMIFGYGLGFVIIM
Sbjct: 81  FQKVLIPILQWEATAFGRPMLAIVLVVSLALFPVFLIPSGPSMWLAGMIFGYGLGFVIIM 140

Query: 145 VGTTIGMVLPYLIGLLFRDRIHQWLKKWPQNAEMIRLAGEGSWFHQFQMVALFRISPFPY 204
           VGTTIGMVLPYLIGL+FRDR+HQWLK+WP+ A ++RLA EGSWFHQF++VA+FR+SPFPY
Sbjct: 141 VGTTIGMVLPYLIGLMFRDRLHQWLKRWPRQAAVLRLAAEGSWFHQFRVVAIFRVSPFPY 200

Query: 205 TIFNYAIVVTNMRFWPYLCGSIAGMVPEAFLYIYSGRLIRTLADAQYGKHHLTTVEIVYN 264
           TIFNYAIVVT+MRFWPY  GSIAGM+PEAF+YIYSGRLIRT AD QYG   LTTVEIVYN
Sbjct: 201 TIFNYAIVVTSMRFWPYFFGSIAGMIPEAFIYIYSGRLIRTFADVQYGHQRLTTVEIVYN 260

Query: 265 IISFIIAVVTIVGFTVYAKRTLNELKMAEANEE 297
           +IS +IAVVT V FTVYAKR L EL+ AEANE+
Sbjct: 261 VISLVIAVVTTVAFTVYAKRALRELQNAEANED 293


>AT1G12450.1 | Symbols:  | SNARE associated Golgi protein family |
           chr1:4244496-4245808 FORWARD LENGTH=303
          Length = 303

 Score =  213 bits (543), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 104/243 (42%), Positives = 150/243 (61%), Gaps = 4/243 (1%)

Query: 53  INSFRWWMKV--LLWCLASXXXXXXXXXXXXPFVFEKILYPTMEWEATAFGRPXXXXXXX 110
           + S  +W+K+  L+ CL S            PF+ EK L P + W    F  P       
Sbjct: 53  VTSVWFWVKLISLVVCLGSLAFVIIKWVG--PFLIEKELIPFINWVRNTFSIPVLGLLLF 110

Query: 111 XXXXXFPVILFPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYLIGLLFRDRIHQWLK 170
                FP IL PS PSMW+AG+ FGYG GF++I+   +IG+ LP+LIG LF  ++ +WLK
Sbjct: 111 ASVALFPSILLPSSPSMWMAGLTFGYGKGFLLILSAASIGVTLPFLIGHLFLHKMQEWLK 170

Query: 171 KWPQNAEMIRLAGEGSWFHQFQMVALFRISPFPYTIFNYAIVVTNMRFWPYLCGSIAGMV 230
           K+P+ A ++R AGEG+WFHQFQ V L R+SPFPY I+NY  + T + + PY+ GS+ GMV
Sbjct: 171 KYPKKAAILRAAGEGTWFHQFQAVTLIRVSPFPYIIYNYCALATGVHYGPYILGSLVGMV 230

Query: 231 PEAFLYIYSGRLIRTLADAQYGKHHLTTVEIVYNIISFIIAVVTIVGFTVYAKRTLNELK 290
           PE F+ IY+G ++RTLA A   +H L+ VEIV N++ F +     +  T+YAK+ L+ ++
Sbjct: 231 PEIFVSIYTGIMLRTLAVASDTRHTLSVVEIVVNVLGFCVTASATIVCTIYAKKKLSAMQ 290

Query: 291 MAE 293
             +
Sbjct: 291 SED 293


>AT4G22850.1 | Symbols:  | SNARE associated Golgi protein family |
           chr4:11994194-11995941 FORWARD LENGTH=296
          Length = 296

 Score =  205 bits (522), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 95/213 (44%), Positives = 134/213 (62%), Gaps = 1/213 (0%)

Query: 82  PFVFEKILYPTMEWEATAFGRPXXXXXXXXXXXXFPVILFPSGPSMWLAGMIFGYGLGFV 141
           P + +K L P ++WE   F  P            FP IL PS PSMW+AGM FGYG GF+
Sbjct: 79  PLIMDKELIPLIQWEIRTFTHPVCGLLVFASVAIFPTILLPSTPSMWIAGMTFGYGYGFL 138

Query: 142 IIMVGTTIGMVLPYLIGLLFRDRIHQWLKKWPQNAEMIRLAGEGSWFHQFQMVALFRISP 201
           +I+    +G+ LPY IG LF  +I  WL+++P  A ++R AGEG+W HQF +V L RISP
Sbjct: 139 LIISAAAVGVSLPYFIGQLFCHKIQGWLERYPDQAAVLRAAGEGNWLHQFLLVTLIRISP 198

Query: 202 FPYTIFNYAIVVTNMRFWPYLCGSIAGMVPEAFLYIYSGRLIRTLADAQYGKHH-LTTVE 260
           FPY ++NY  V T +++ PY+ GS+ GMVPE F+ IY+G L+RTLA+A   +   L+  +
Sbjct: 199 FPYILYNYCSVATRVKYGPYITGSLLGMVPEVFVAIYTGILVRTLAEASSAEEQGLSVTQ 258

Query: 261 IVYNIISFIIAVVTIVGFTVYAKRTLNELKMAE 293
           ++ NI+ F+  V T +  T YAKR L  +K  +
Sbjct: 259 VILNILGFLATVATTILITKYAKRQLETMKKED 291


>AT4G12000.1 | Symbols:  | SNARE associated Golgi protein family |
           chr4:7193527-7194942 REVERSE LENGTH=306
          Length = 306

 Score =  201 bits (511), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 98/210 (46%), Positives = 131/210 (62%), Gaps = 1/210 (0%)

Query: 82  PFVFEKILYPTMEWEATAFGRPXXXXXXXXXXXXFPVILFPSGPSMWLAGMIFGYGLGFV 141
           P + +K L P ++WE   F  P            FPVIL P+ PSMW+AG+ FGY  G +
Sbjct: 88  PLIMDKELIPLIKWEMETFTHPVCGILVFASVSLFPVILIPTTPSMWVAGITFGYFYGLL 147

Query: 142 IIMVGTTIGMVLPYLIGLLFRDRIHQWLKKWPQNAEMIRLAGEGSWFHQFQMVALFRISP 201
           + +    IG+ LPY I  LF ++I  WL+++P  A M+R AG GSWFHQF+ V L RISP
Sbjct: 148 LTLPAVAIGVSLPYFISYLFLNKIQGWLERYPDQAAMLRAAGGGSWFHQFRAVTLIRISP 207

Query: 202 FPYTIFNYAIVVTNMRFWPYLCGSIAGMVPEAFLYIYSGRLIRTLADAQYGKHH-LTTVE 260
           FP+ ++NY  V T ++F PY+ GS+ GM PE F+ IY+G LIRTLADA   +   L+ ++
Sbjct: 208 FPFAVYNYCAVATRVKFGPYMAGSLVGMAPEIFVAIYTGILIRTLADASTAEQKGLSILQ 267

Query: 261 IVYNIISFIIAVVTIVGFTVYAKRTLNELK 290
           IV NI  F+  VVT V  T YAKR L  +K
Sbjct: 268 IVLNIFGFVATVVTTVLITKYAKRQLEVMK 297


>AT4G22850.2 | Symbols:  | SNARE associated Golgi protein family |
           chr4:11994194-11996048 FORWARD LENGTH=277
          Length = 277

 Score =  183 bits (465), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 82/174 (47%), Positives = 112/174 (64%)

Query: 82  PFVFEKILYPTMEWEATAFGRPXXXXXXXXXXXXFPVILFPSGPSMWLAGMIFGYGLGFV 141
           P + +K L P ++WE   F  P            FP IL PS PSMW+AGM FGYG GF+
Sbjct: 79  PLIMDKELIPLIQWEIRTFTHPVCGLLVFASVAIFPTILLPSTPSMWIAGMTFGYGYGFL 138

Query: 142 IIMVGTTIGMVLPYLIGLLFRDRIHQWLKKWPQNAEMIRLAGEGSWFHQFQMVALFRISP 201
           +I+    +G+ LPY IG LF  +I  WL+++P  A ++R AGEG+W HQF +V L RISP
Sbjct: 139 LIISAAAVGVSLPYFIGQLFCHKIQGWLERYPDQAAVLRAAGEGNWLHQFLLVTLIRISP 198

Query: 202 FPYTIFNYAIVVTNMRFWPYLCGSIAGMVPEAFLYIYSGRLIRTLADAQYGKHH 255
           FPY ++NY  V T +++ PY+ GS+ GMVPE F+ IY+G L+RTLA+A   +  
Sbjct: 199 FPYILYNYCSVATRVKYGPYITGSLLGMVPEVFVAIYTGILVRTLAEASSAEEQ 252


>AT1G03260.1 | Symbols:  | SNARE associated Golgi protein family |
           chr1:795678-798102 REVERSE LENGTH=274
          Length = 274

 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 90/180 (50%), Gaps = 8/180 (4%)

Query: 131 GMIFGYGLGFVIIMVGTTIGMVLPYLIG-LLFRDRIHQWLKKWPQ-NAEMIRLAGEGSWF 188
           G +FG  +GFV   +G T+G    +L+G  + +  +   +K +P+  A  + +   G   
Sbjct: 77  GYLFGLPVGFVADSLGATLGATAAFLLGRTIGKSYVTSKIKHYPKFQAVSVAIQKSG--- 133

Query: 189 HQFQMVALFRISP-FPYTIFNYAIVVTNMRFWPYLCGSIAGMVPEAFLYIYSGRLIRTLA 247
             F++V L R+ P  P+ + NY + VT +R   Y+  +  GM+P  F  +Y G  ++ L+
Sbjct: 134 --FKIVLLLRVVPILPFNMLNYLLSVTPVRLGEYMLATWLGMMPITFALVYVGTTLKDLS 191

Query: 248 DAQYGKHHLTTVEIVYNIISFIIAVVTIVGFTVYAKRTLNELKMAEANEEAASVSGNASL 307
           D  +G H ++    V  ++   +AV+ I+  T  AK +L++       E     + +AS+
Sbjct: 192 DITHGWHEVSVFRWVIMMVGVALAVILIICITRVAKSSLDKALAENGTELDGKKNDDASV 251


>AT5G19070.1 | Symbols:  | SNARE associated Golgi protein family |
           chr5:6375569-6377470 FORWARD LENGTH=280
          Length = 280

 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 95/191 (49%), Gaps = 14/191 (7%)

Query: 131 GMIFGYGLGFVIIMVGTTIGMVLPYLIG-LLFRDRIHQWLKKWPQNAEMIRLAGEGSWFH 189
           G +FG  +GFV   VG T+G    +L+G  + +  +   LK +PQ  + + LA E S F 
Sbjct: 75  GYLFGLPIGFVADSVGATLGSGAAFLLGRTIGKPFVVAKLKDYPQF-QSVALAIEKSGFK 133

Query: 190 QFQMVALFRISPFPYTIFNYAIVVTNMRFWPYLCGSIAGMVPEAFLYIYSGRLIRTLADA 249
              ++ L  + PF  ++ NY + VT +R  PYL  S  GM+P     +Y G  ++ L+D 
Sbjct: 134 ICLLLRLAPLLPF--SMLNYLLSVTPIRLGPYLLSSWLGMMPITLALVYVGTTLKDLSDV 191

Query: 250 QYGKHHLTTVEIVYNIISFIIAVVTIVGFTVYAKRTLNELKMAE----ANEEAA-----S 300
            +     +     + I S +I+V+ +V  T  AK  L +  +AE     NE  A     +
Sbjct: 192 THKWSEFSPGRWAFLISSLVISVILMVCVTKVAKDALRK-ALAEHGGDMNEAVAALPELT 250

Query: 301 VSGNASLEIEK 311
           V+ +AS ++ +
Sbjct: 251 VTDDASTDLNE 261


>AT1G22850.1 | Symbols:  | SNARE associated Golgi protein family |
           chr1:8080671-8082816 REVERSE LENGTH=344
          Length = 344

 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 75/131 (57%), Gaps = 6/131 (4%)

Query: 118 VILFPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYLIGLLF-RDRIHQWLKKWPQNA 176
           ++  P+ P    AG++FG  +G +I+ +  T+   + +LI   F R+RI + ++   +  
Sbjct: 165 ILAIPALPLTMSAGLLFGPLIGTIIVSISGTMAASVAFLIARYFARERILKLVEDNKKFL 224

Query: 177 EMIRLAGEGSWFHQFQMVALFRISPF-PYTIFNYAIVVTNMRFWPYLCGSIAGMVPEAFL 235
            + +  GE    + F++V L R+SP  P+++ NY   +T+++F PY+ GS  GM+P ++ 
Sbjct: 225 AIDKAIGE----NGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPGSWA 280

Query: 236 YIYSGRLIRTL 246
           Y+ +G   R +
Sbjct: 281 YVSAGAFGRAI 291