Miyakogusa Predicted Gene

Lj6g3v1692550.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1692550.1 Non Chatacterized Hit- tr|H9W8J6|H9W8J6_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=U,58.73,0.00000000000002,O-FucT,GDP-fucose protein
O-fucosyltransferase,CUFF.59775.1
         (445 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G05320.1 | Symbols:  | O-fucosyltransferase family protein | ...   542   e-154

>AT3G05320.1 | Symbols:  | O-fucosyltransferase family protein |
           chr3:1513558-1514895 REVERSE LENGTH=445
          Length = 445

 Score =  542 bits (1396), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 274/436 (62%), Positives = 330/436 (75%), Gaps = 20/436 (4%)

Query: 13  KSTASKCMVLFVTVLILRVL---FPPSFPGFDGFEWSNFVYINSHSELGIRQDKFLAVPQ 69
           KS A KC+VL    L  R L   + P     +   + +    +S S  GIR DKFL VPQ
Sbjct: 15  KSVACKCLVLVGIALFYRALLLSYSPRNALSNSLLFRDRHMSDSSSTGGIRTDKFLEVPQ 74

Query: 70  LVWGLNNQKIAFARACLTARMLNRTLLMPSFSASLFYKEIDLLQPISFDKVFQFDKFNTL 129
           +VWGLNNQKIAFARACLTARM+NRTLLMPS SASLFYKE+D L+PI FDKVFQF++FN+L
Sbjct: 75  IVWGLNNQKIAFARACLTARMMNRTLLMPSLSASLFYKEVDKLRPIPFDKVFQFERFNSL 134

Query: 130 CRGFVRLGYYSDVLNRTEVLEMQKGSGRRWTLERDLSQLKEYSIG-SFDDYEVIRIVGKN 188
           C GFVRL  +SDV NR +V +++KGSGRRWT+ERDL  LK+ +   S D++EVIR++GKN
Sbjct: 135 CSGFVRLSRFSDVKNRAQVFDLEKGSGRRWTVERDLEHLKQSARNESIDEFEVIRLIGKN 194

Query: 189 PFMWHDHWHVKDYARVFECLEVLDEIAQEADRVVSRIREVGKEVIGKTESEELKKSITSD 248
           PF+WHDHW V+DYA+VFEC+ V+DEI++EAD+VV +IRE G       E+E  K  + S 
Sbjct: 195 PFLWHDHWPVEDYAKVFECMVVVDEISREADKVVMKIREAG-------EAERAK--LASK 245

Query: 249 SSSFQPLPYVSVHMRIEIDWMIHCKKLEQRLNTNQICSSKKEIMERVKNIVGLKTPIVVY 308
           +    P+P+V+VHMRIEIDWMIHCKKLEQR   ++ICSSK+EI++RV NI GLKTP V+Y
Sbjct: 246 TEILGPVPFVAVHMRIEIDWMIHCKKLEQRKKISEICSSKREILDRVGNISGLKTPTVLY 305

Query: 309 LAVADKLLNT----SSIMEGWGDGFLPFEKKKLAV-DGIYKKYPYLIQSAIDYEVCLRAD 363
           LAVAD LL      SS++ GW DG +PFEKKKL V + IY KY YLIQSAIDYEVCLRAD
Sbjct: 306 LAVADTLLEEKEEDSSVLSGWRDGLIPFEKKKLGVKEEIYGKYSYLIQSAIDYEVCLRAD 365

Query: 364 IFVGNSFSTFSSLIVLERTQKMIRTSVTSMC-GTDVRWPSYAYNLAGESNG-PMRWITNM 421
           +FVGNSFSTFSSLIVLERTQK  R    S C     +W SYAYNLAGESNG P RW+TNM
Sbjct: 366 VFVGNSFSTFSSLIVLERTQKARRLGFMSSCKDGGNKWRSYAYNLAGESNGVPRRWMTNM 425

Query: 422 SDSSLQAISYGTNHIS 437
           + SSLQAISYG+N +S
Sbjct: 426 THSSLQAISYGSNSVS 441