Miyakogusa Predicted Gene

Lj6g3v1692490.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1692490.1 tr|G7ZYQ0|G7ZYQ0_MEDTR High affinity cationic
amino acid transporter OS=Medicago truncatula
GN=MTR_0,48.41,2e-18,CATIONIC AMINO ACID TRANSPORTER,Cationic amino
acid transporter; AMINO ACID TRANSPORTER,Amino acid/p,CUFF.59792.1
         (129 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G10600.1 | Symbols: CAT7 | cationic amino acid transporter 7 ...    96   8e-21
AT5G04770.1 | Symbols: ATCAT6, CAT6 | cationic amino acid transp...    90   4e-19
AT2G34960.1 | Symbols: CAT5 | cationic amino acid transporter 5 ...    72   1e-13
AT4G21120.1 | Symbols: AAT1, CAT1 | amino acid transporter 1 | c...    65   1e-11
AT1G17120.1 | Symbols: CAT8 | cationic amino acid transporter 8 ...    63   4e-11

>AT3G10600.1 | Symbols: CAT7 | cationic amino acid transporter 7 |
           chr3:3313969-3317162 FORWARD LENGTH=584
          Length = 584

 Score = 95.5 bits (236), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 58/127 (45%), Positives = 69/127 (54%), Gaps = 44/127 (34%)

Query: 6   NHP--SSFSSFRAYLKTVAHTPSRLARRAVSV---------------------------- 35
           NH   +SFSS R YL +++ TPSR +RRAVSV                            
Sbjct: 7   NHDGDTSFSSLRVYLNSLSDTPSRFSRRAVSVSTSYDEMSRVRAVSGEQMRRTLRWYDLI 66

Query: 36  --------------TTGRAAHDYAGSAFKLSYAIFGLCALLSAFCYTEFVVDMPVAGGAF 81
                         TTGRA+  YAG +  +SYAI GLCALLSAFCYTEF V +PVAGGAF
Sbjct: 67  GLGIGGMIGAGVFVTTGRASRLYAGPSIVVSYAIAGLCALLSAFCYTEFAVHLPVAGGAF 126

Query: 82  SYLRVTF 88
           SY+R+TF
Sbjct: 127 SYIRITF 133


>AT5G04770.1 | Symbols: ATCAT6, CAT6 | cationic amino acid
           transporter 6 | chr5:1379118-1382304 FORWARD LENGTH=583
          Length = 583

 Score = 90.1 bits (222), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 54/120 (45%), Positives = 65/120 (54%), Gaps = 42/120 (35%)

Query: 11  FSSFRAYLKTVAHTPSRLARRAVSV----------------------------------- 35
           FSS R YL +++ TPSRL+RRA+SV                                   
Sbjct: 15  FSSLRVYLNSLSATPSRLSRRAISVSTSSDEMSRVRAVSGEQMRRTLRWYDLIGLGIGGM 74

Query: 36  -------TTGRAAHDYAGSAFKLSYAIFGLCALLSAFCYTEFVVDMPVAGGAFSYLRVTF 88
                  TTGRA+   AG +  +SYAI GLCALLSAFCYTEF V +PVAGGAFSY+R+TF
Sbjct: 75  VGAGVFVTTGRASRLDAGPSIVVSYAIAGLCALLSAFCYTEFAVHLPVAGGAFSYIRITF 134


>AT2G34960.1 | Symbols: CAT5 | cationic amino acid transporter 5 |
           chr2:14744175-14745884 REVERSE LENGTH=569
          Length = 569

 Score = 71.6 bits (174), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 32/54 (59%), Positives = 42/54 (77%)

Query: 33  VSVTTGRAAHDYAGSAFKLSYAIFGLCALLSAFCYTEFVVDMPVAGGAFSYLRV 86
           + V TG+ AH+ AG A  LSY + GL A+LS FCYTEF V++PVAGG+F+YLR+
Sbjct: 86  IFVLTGQEAHEQAGPAIVLSYVVSGLSAMLSVFCYTEFAVEIPVAGGSFAYLRI 139


>AT4G21120.1 | Symbols: AAT1, CAT1 | amino acid transporter 1 |
           chr4:11270318-11273775 FORWARD LENGTH=594
          Length = 594

 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 54/120 (45%), Gaps = 42/120 (35%)

Query: 9   SSFSSFRAYLKTVAHTPSRLARRAVS---------------------------------- 34
            SF S   YLK +  TPSR   R ++                                  
Sbjct: 26  ESFQSMGNYLKALKETPSRFMDRIMTRSLDSDEINEMKARSGHEMKKTLTWWDLMWFGIG 85

Query: 35  --------VTTGRAAHDYAGSAFKLSYAIFGLCALLSAFCYTEFVVDMPVAGGAFSYLRV 86
                   V TG  A +++G A  LSY + G+ A+LS FCYTEF V++PVAGG+F+YLRV
Sbjct: 86  AVIGSGIFVLTGLEARNHSGPAVVLSYVVSGVSAMLSVFCYTEFAVEIPVAGGSFAYLRV 145


>AT1G17120.1 | Symbols: CAT8 | cationic amino acid transporter 8 |
           chr1:5851964-5853736 FORWARD LENGTH=590
          Length = 590

 Score = 63.2 bits (152), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/54 (62%), Positives = 39/54 (72%)

Query: 33  VSVTTGRAAHDYAGSAFKLSYAIFGLCALLSAFCYTEFVVDMPVAGGAFSYLRV 86
           V V TG+ A   AG A  LSYAI G+ ALLS  CY EF V++PVAGG+FSYLRV
Sbjct: 103 VFVITGQEARVGAGPAVVLSYAISGVSALLSVLCYAEFGVEIPVAGGSFSYLRV 156