Miyakogusa Predicted Gene

Lj6g3v1690560.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1690560.1 Non Chatacterized Hit- tr|I1L0C1|I1L0C1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13834
PE,82.73,0,CAP_GLY_2,CAP Gly-rich domain; LRR,Leucine-rich repeat;
CAP_GLY,CAP Gly-rich domain; LRR_4,Leucine r,CUFF.59764.1
         (433 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G71440.1 | Symbols: PFI, TFC E | tubulin folding cofactor E /...   537   e-153

>AT1G71440.1 | Symbols: PFI, TFC E | tubulin folding cofactor E /
           Pfifferling (PFI) | chr1:26921271-26924373 REVERSE
           LENGTH=531
          Length = 531

 Score =  537 bits (1384), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 270/422 (63%), Positives = 338/422 (80%), Gaps = 4/422 (0%)

Query: 13  VGQRVHASGDSRRIGTVKYVGPVEGYSDIWVGVEWD-NGEGKHDGSINGVRYFHAKSEKS 71
           +GQRVH+  DSRR+GTVKYVG VEGYS  W+GV+WD +G+GKH+GS+NGV YF+ +S+ S
Sbjct: 12  IGQRVHSLNDSRRVGTVKYVGDVEGYSGTWIGVDWDQDGDGKHNGSVNGVFYFNGRSQSS 71

Query: 72  ASFVRAQNLNQGISLLEALETRYRSHSTKDEEDEMYVLSTSNKRVSVQFLGQNQIHDKLS 131
           ASFVR+QNL++GI+LL+ALE RYR+ STKDEEDEMYVLS  N+RVS+Q LG ++I DKLS
Sbjct: 72  ASFVRSQNLSRGITLLQALELRYRTISTKDEEDEMYVLSAGNRRVSIQLLGGDKIQDKLS 131

Query: 132 RFEELTAISLSFMGISSPGDPCHINTTVPNIKALDLSGNLLSEWKDVGTICEQLPALGTL 191
           RFEELT+ SLS++G+SS G    + + +PN+K LDL+GNL+S+W+++G +CEQLPAL TL
Sbjct: 132 RFEELTSASLSYLGVSSLGVSSDLGSILPNLKLLDLTGNLISDWEEIGALCEQLPALTTL 191

Query: 192 NLSYNLMTPYKSELPLLKSIRVLVLNNTGVDWEQVELLRQPLMAIEELHIRGNNISRILP 251
           NLS N ++     LP LK+IRVLVLNN+G+ W QVE+LR+ L  IEELH+ GN IS I  
Sbjct: 192 NLSCNSLSSDIKSLPQLKNIRVLVLNNSGLSWTQVEILRRSLPGIEELHLMGNMISTITS 251

Query: 252 MTSSMVQGFDSLRLLNLEDNCIAEWKEIMKLSQLRCLEQLYLNKNCLSSLFYPDNYSLYE 311
            +SS  Q F+SLRLLNL+DNCI++W E++KLSQL CLEQLYLNKN LS +F   N +  E
Sbjct: 252 TSSSDDQAFNSLRLLNLDDNCISDWSEVLKLSQLPCLEQLYLNKNKLSRIFQSVNGT--E 309

Query: 312 SEVKCCKPFQNLRCLLLGDNNISDLASVDSLNSFPNLVDIRLSGNPITDSTRGGIPRFVL 371
           S  K   PF +L CLLLG NNI DLASVD+LN FP LVDIRLS NPI+D  RGG+PRFVL
Sbjct: 310 SSEKGSDPFPSLSCLLLGANNIGDLASVDALNGFPQLVDIRLSENPISDPVRGGVPRFVL 369

Query: 372 IARLAKIQILNGSEVTPRERKDSEIRYVRLVMSRLHASPGEIK-QHPRFSELKSFYGIED 430
           +ARL K+Q+LNGSEV  RE+KDSEIRYVR+VMS+L+   GEI+  HPRF ELK  +GIED
Sbjct: 370 VARLTKVQVLNGSEVRAREKKDSEIRYVRMVMSKLNDKSGEIELLHPRFYELKKLHGIED 429

Query: 431 EK 432
           E+
Sbjct: 430 ER 431