Miyakogusa Predicted Gene
- Lj6g3v1679480.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1679480.1 Non Chatacterized Hit- tr|I1MG15|I1MG15_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,79.15,0,PLP-dependent
transferases,Pyridoxal phosphate-dependent transferase, major domain;
DDC_GAD_HDC_YDC,,CUFF.59758.1
(518 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G20340.1 | Symbols: | Pyridoxal phosphate (PLP)-dependent tr... 572 e-163
AT4G28680.1 | Symbols: TYRDC, TYRDC1 | L-tyrosine decarboxylase ... 549 e-156
AT4G28680.4 | Symbols: TYRDC | L-tyrosine decarboxylase | chr4:1... 546 e-155
AT4G28680.3 | Symbols: TYRDC | L-tyrosine decarboxylase | chr4:1... 546 e-155
AT4G28680.2 | Symbols: TYRDC, TYRDC1 | L-tyrosine decarboxylase ... 544 e-155
>AT2G20340.1 | Symbols: | Pyridoxal phosphate (PLP)-dependent
transferases superfamily protein | chr2:8779804-8782490
FORWARD LENGTH=490
Length = 490
Score = 572 bits (1474), Expect = e-163, Method: Compositional matrix adjust.
Identities = 262/516 (50%), Positives = 360/516 (69%), Gaps = 36/516 (6%)
Query: 1 MNPLDPKEFRKQGHMIIDFLADYYQNVANYPVLSQVEPGYLAKLLPPFAPHNPESIETIL 60
+ P+D ++ R+ GH+++DF+ADYY+ + ++PVLSQV+PGYL KLLP AP +PE+++ +L
Sbjct: 9 LKPMDSEQLREYGHLMVDFIADYYKTIEDFPVLSQVQPGYLHKLLPDSAPDHPETLDQVL 68
Query: 61 QDLQQHIIPGITHWQSPNYFAYFPSSGSTAGFLGEMISTGLNVVGFNWVSSPAATELESI 120
D++ I+PG+THWQSP++FAY+PS+ S AGFLGEM+S GL +VGF+WV+SPAATELE I
Sbjct: 69 DDVRAKILPGVTHWQSPSFFAYYPSNSSVAGFLGEMLSAGLGIVGFSWVTSPAATELEMI 128
Query: 121 VMDWLGQALKLPDAFLFKXXXXXXXXXTTCEAILATLVASRDQILYQIGSENLTKLVVYG 180
V+DW+ + L LP+ F+ K + EA+L L+A+RD++L +G L KLVVY
Sbjct: 129 VLDWVAKLLNLPEQFMSKGNGGGVIQGSASEAVLVVLIAARDKVLRSVGKNALEKLVVYS 188
Query: 181 SDQTHCSVQKAAHIVGIHPKNIRAIKTVKSKSFSLEPEALLSAIQSDVKKGLVPCYLCVT 240
SDQTH ++QKA I GIHP+N R + T S +++L PE+L A+ D++ GL+P +LC
Sbjct: 189 SDQTHSALQKACQIAGIHPENCRVLTTDSSTNYALRPESLQEAVSRDLEAGLIPFFLCAN 248
Query: 241 VGTTSTTAIDPIGPLCKVAKDYSMWVHVDAAYAGSACICPEFRHLIDGVEDADSFSFNAH 300
VGTTS+TA+DP+ L K+A +W HVDAAYAGSACICPE+R IDGVE ADSF+ NAH
Sbjct: 249 VGTTSSTAVDPLAALGKIANSNGIWFHVDAAYAGSACICPEYRQYIDGVETADSFNMNAH 308
Query: 301 KWFLTNLDCCCLWVKDPPSLVKSLSTNSVYLENSASETKQVVDYKDWQIPLSRRFRALKV 360
KWFLTN DC LWVKD SL +LSTN +L+N AS+ VVDYKDWQIPL RRFR+LK+
Sbjct: 309 KWFLTNFDCSLLWVKDQDSLTLALSTNPEFLKNKASQANLVVDYKDWQIPLGRRFRSLKL 368
Query: 361 WLVLRSYGVANLRNFLRSHVEMAKTFEELVKKDTRFEIVVPRNLAVVFFRLLPSVTTKFA 420
W+VLR YG L++++R+H+++AK FE+LV +D FEIV PR A+V FRL+P
Sbjct: 369 WMVLRLYGSETLKSYIRNHIKLAKEFEQLVSQDPNFEIVTPRIFALVCFRLVP------- 421
Query: 421 NGKVQNGNLIANGKVQNGNIIANGKVQNGDLKTKDVANEMNRKLLDSINGSGTVYMTHAV 480
V++ + K N NR+LLD++N SG ++M+H
Sbjct: 422 -------------------------VKDEEKK----CNNRNRELLDAVNSSGKLFMSHTA 452
Query: 481 VGGIFVIRCAIGATLTEEMHEIKAWKVVQEHADVII 516
+ G V+RCAIGA LTEE H +AWK++QE A ++
Sbjct: 453 LSGKIVLRCAIGAPLTEEKHVKEAWKIIQEEASYLL 488
>AT4G28680.1 | Symbols: TYRDC, TYRDC1 | L-tyrosine decarboxylase |
chr4:14155248-14158546 FORWARD LENGTH=545
Length = 545
Score = 549 bits (1414), Expect = e-156, Method: Compositional matrix adjust.
Identities = 261/516 (50%), Positives = 352/516 (68%), Gaps = 40/516 (7%)
Query: 1 MNPLDPKEFRKQGHMIIDFLADYYQNVAN----YPVLSQVEPGYLAKLLPPFAPHNPESI 56
M P+D + R+QGH+++DF+ADYY+N+ + +PVLSQV+PGYL +LP AP PES+
Sbjct: 57 MKPMDSELLREQGHIMVDFIADYYKNLQDSPQDFPVLSQVQPGYLRDMLPDSAPERPESL 116
Query: 57 ETILQDLQQHIIPGITHWQSPNYFAYFPSSGSTAGFLGEMISTGLNVVGFNWVSSPAATE 116
+ +L D+ + I+PGITHWQSP+YFAY+ SS S AGFLGEM++ GL+VVGF W++SPAATE
Sbjct: 117 KELLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATE 176
Query: 117 LESIVMDWLGQALKLPDAFLFKXXXXXXXXXTTCEAILATLVASRDQILYQIGSENLTKL 176
LE IV+DWL + L+LPD FL T CEA+L ++A+RD+IL ++G L +L
Sbjct: 177 LEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQL 236
Query: 177 VVYGSDQTHCSVQKAAHIVGIHPKNIRAIKTVKSKSFSLEPEALLSAIQSDVKKGLVPCY 236
VVYGSDQTH S +KA I GIH +NIR +KT S ++ + PE+L AI D+ KG +P +
Sbjct: 237 VVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFF 296
Query: 237 LCVTVGTTSTTAIDPIGPLCKVAKDYSMWVHVDAAYAGSACICPEFRHLIDGVEDADSFS 296
+C TVGTTS+ A+DP+ PL +AK Y +W+HVDAAYAG+ACICPE+R IDG+E+ADSF+
Sbjct: 297 ICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFN 356
Query: 297 FNAHKWFLTNLDCCCLWVKDPPSLVKSLSTNSVYLENSASETKQVVDYKDWQIPLSRRFR 356
NAHKW N C LWVKD SL+ +L TN YLE S+ VV+YKDWQI LSRRFR
Sbjct: 357 MNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFR 416
Query: 357 ALKVWLVLRSYGVANLRNFLRSHVEMAKTFEELVKKDTRFEIVVPRNLAVVFFRLLPSVT 416
+LK+W+VLR YG NLRNF+R HV +AK FE+ V +D FE+V R ++V FRL P
Sbjct: 417 SLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPV-- 474
Query: 417 TKFANGKVQNGNLIANGKVQNGNIIANGKVQNGDLKTKDVANEMNRKLLDSINGSGTVYM 476
+GD +D NE NR+LL ++N +G +++
Sbjct: 475 -------------------------------DGD---EDQCNERNRELLAAVNSTGKIFI 500
Query: 477 THAVVGGIFVIRCAIGATLTEEMHEIKAWKVVQEHA 512
+H + G FV+R A+GA LTEE H +AW+++Q+HA
Sbjct: 501 SHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHA 536
>AT4G28680.4 | Symbols: TYRDC | L-tyrosine decarboxylase |
chr4:14155184-14158546 FORWARD LENGTH=538
Length = 538
Score = 546 bits (1407), Expect = e-155, Method: Compositional matrix adjust.
Identities = 262/518 (50%), Positives = 353/518 (68%), Gaps = 42/518 (8%)
Query: 1 MNPLDPKEFRKQGHMIIDFLADYYQNVAN----YPVLSQVEPGYLAKLLPPFAPHNPESI 56
M P+D + R+QGH+++DF+ADYY+N+ + +PVLSQV+PGYL +LP AP PES+
Sbjct: 48 MKPMDSELLREQGHIMVDFIADYYKNLQDSPQDFPVLSQVQPGYLRDMLPDSAPERPESL 107
Query: 57 ETILQDLQQHIIPGITHWQSPNYFAYFPSSGSTAGFLGEMISTGLNVVGFNWVSSPAATE 116
+ +L D+ + I+PGITHWQSP+YFAY+ SS S AGFLGEM++ GL+VVGF W++SPAATE
Sbjct: 108 KELLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATE 167
Query: 117 LESIVMDWLGQALKLPDAFLF--KXXXXXXXXXTTCEAILATLVASRDQILYQIGSENLT 174
LE IV+DWL + L+LPD FL K T CEA+L ++A+RD+IL ++G L
Sbjct: 168 LEIIVLDWLAKLLQLPDHFLSTGKGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLP 227
Query: 175 KLVVYGSDQTHCSVQKAAHIVGIHPKNIRAIKTVKSKSFSLEPEALLSAIQSDVKKGLVP 234
+LVVYGSDQTH S +KA I GIH +NIR +KT S ++ + PE+L AI D+ KG +P
Sbjct: 228 QLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIP 287
Query: 235 CYLCVTVGTTSTTAIDPIGPLCKVAKDYSMWVHVDAAYAGSACICPEFRHLIDGVEDADS 294
++C TVGTTS+ A+DP+ PL +AK Y +W+HVDAAYAG+ACICPE+R IDG+E+ADS
Sbjct: 288 FFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADS 347
Query: 295 FSFNAHKWFLTNLDCCCLWVKDPPSLVKSLSTNSVYLENSASETKQVVDYKDWQIPLSRR 354
F+ NAHKW N C LWVKD SL+ +L TN YLE S+ VV+YKDWQI LSRR
Sbjct: 348 FNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRR 407
Query: 355 FRALKVWLVLRSYGVANLRNFLRSHVEMAKTFEELVKKDTRFEIVVPRNLAVVFFRLLPS 414
FR+LK+W+VLR YG NLRNF+R HV +AK FE+ V +D FE+V R ++V FRL P
Sbjct: 408 FRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPV 467
Query: 415 VTTKFANGKVQNGNLIANGKVQNGNIIANGKVQNGDLKTKDVANEMNRKLLDSINGSGTV 474
+GD +D NE NR+LL ++N +G +
Sbjct: 468 ---------------------------------DGD---EDQCNERNRELLAAVNSTGKI 491
Query: 475 YMTHAVVGGIFVIRCAIGATLTEEMHEIKAWKVVQEHA 512
+++H + G FV+R A+GA LTEE H +AW+++Q+HA
Sbjct: 492 FISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHA 529
>AT4G28680.3 | Symbols: TYRDC | L-tyrosine decarboxylase |
chr4:14155248-14158546 FORWARD LENGTH=547
Length = 547
Score = 546 bits (1406), Expect = e-155, Method: Compositional matrix adjust.
Identities = 262/518 (50%), Positives = 353/518 (68%), Gaps = 42/518 (8%)
Query: 1 MNPLDPKEFRKQGHMIIDFLADYYQNVAN----YPVLSQVEPGYLAKLLPPFAPHNPESI 56
M P+D + R+QGH+++DF+ADYY+N+ + +PVLSQV+PGYL +LP AP PES+
Sbjct: 57 MKPMDSELLREQGHIMVDFIADYYKNLQDSPQDFPVLSQVQPGYLRDMLPDSAPERPESL 116
Query: 57 ETILQDLQQHIIPGITHWQSPNYFAYFPSSGSTAGFLGEMISTGLNVVGFNWVSSPAATE 116
+ +L D+ + I+PGITHWQSP+YFAY+ SS S AGFLGEM++ GL+VVGF W++SPAATE
Sbjct: 117 KELLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATE 176
Query: 117 LESIVMDWLGQALKLPDAFLF--KXXXXXXXXXTTCEAILATLVASRDQILYQIGSENLT 174
LE IV+DWL + L+LPD FL K T CEA+L ++A+RD+IL ++G L
Sbjct: 177 LEIIVLDWLAKLLQLPDHFLSTGKGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLP 236
Query: 175 KLVVYGSDQTHCSVQKAAHIVGIHPKNIRAIKTVKSKSFSLEPEALLSAIQSDVKKGLVP 234
+LVVYGSDQTH S +KA I GIH +NIR +KT S ++ + PE+L AI D+ KG +P
Sbjct: 237 QLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIP 296
Query: 235 CYLCVTVGTTSTTAIDPIGPLCKVAKDYSMWVHVDAAYAGSACICPEFRHLIDGVEDADS 294
++C TVGTTS+ A+DP+ PL +AK Y +W+HVDAAYAG+ACICPE+R IDG+E+ADS
Sbjct: 297 FFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADS 356
Query: 295 FSFNAHKWFLTNLDCCCLWVKDPPSLVKSLSTNSVYLENSASETKQVVDYKDWQIPLSRR 354
F+ NAHKW N C LWVKD SL+ +L TN YLE S+ VV+YKDWQI LSRR
Sbjct: 357 FNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRR 416
Query: 355 FRALKVWLVLRSYGVANLRNFLRSHVEMAKTFEELVKKDTRFEIVVPRNLAVVFFRLLPS 414
FR+LK+W+VLR YG NLRNF+R HV +AK FE+ V +D FE+V R ++V FRL P
Sbjct: 417 FRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPV 476
Query: 415 VTTKFANGKVQNGNLIANGKVQNGNIIANGKVQNGDLKTKDVANEMNRKLLDSINGSGTV 474
+GD +D NE NR+LL ++N +G +
Sbjct: 477 ---------------------------------DGD---EDQCNERNRELLAAVNSTGKI 500
Query: 475 YMTHAVVGGIFVIRCAIGATLTEEMHEIKAWKVVQEHA 512
+++H + G FV+R A+GA LTEE H +AW+++Q+HA
Sbjct: 501 FISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHA 538
>AT4G28680.2 | Symbols: TYRDC, TYRDC1 | L-tyrosine decarboxylase |
chr4:14155248-14158546 FORWARD LENGTH=547
Length = 547
Score = 544 bits (1402), Expect = e-155, Method: Compositional matrix adjust.
Identities = 261/518 (50%), Positives = 353/518 (68%), Gaps = 42/518 (8%)
Query: 1 MNPLDPKEFRKQGHMIIDFLADYYQNVAN----YPVLSQVEPGYLAKLLPPFAPHNPESI 56
M P+D + R+QGH+++DF+ADYY+N+ + +PVLSQV+PGYL +LP AP PES+
Sbjct: 57 MKPMDSELLREQGHIMVDFIADYYKNLQDSPQDFPVLSQVQPGYLRDMLPDSAPERPESL 116
Query: 57 ETILQDLQQHIIPGITHWQSPNYFAYFPSSGSTAGFLGEMISTGLNVVGFNWVSSPAATE 116
+ +L D+ + I+PGITHWQSP+YFAY+ SS S AGFLGEM++ GL+VVGF W++SPAATE
Sbjct: 117 KELLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATE 176
Query: 117 LESIVMDWLGQALKLPDAFLFKXXXXXXXXXTTCEAILATLVASRDQILYQIGSENLTKL 176
LE IV+DWL + L+LPD FL T CEA+L ++A+RD+IL ++G L +L
Sbjct: 177 LEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQL 236
Query: 177 VVYGSDQTHCSVQKAAHIVGIHPKNIRAIKTVKSKSFSLEPEALLSAIQSDVKKGLVPCY 236
VVYGSDQTH S +KA I GIH +NIR +KT S ++ + PE+L AI D+ KG +P +
Sbjct: 237 VVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFF 296
Query: 237 LCVTVGTTSTTAIDPIGPLCKVAKDYSMWVHVDAAYAGSACICPEFRHLIDGVEDADSFS 296
+C TVGTTS+ A+DP+ PL +AK Y +W+HVDAAYAG+ACICPE+R IDG+E+ADSF+
Sbjct: 297 ICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFN 356
Query: 297 FNAHKWFLTNLDCCCLWVKDPPSLVKSLSTNSVYLENSASETKQ--VVDYKDWQIPLSRR 354
NAHKW N C LWVKD SL+ +L TN YLE +K+ VV+YKDWQI LSRR
Sbjct: 357 MNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVKVSKKDTVVNYKDWQISLSRR 416
Query: 355 FRALKVWLVLRSYGVANLRNFLRSHVEMAKTFEELVKKDTRFEIVVPRNLAVVFFRLLPS 414
FR+LK+W+VLR YG NLRNF+R HV +AK FE+ V +D FE+V R ++V FRL P
Sbjct: 417 FRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPV 476
Query: 415 VTTKFANGKVQNGNLIANGKVQNGNIIANGKVQNGDLKTKDVANEMNRKLLDSINGSGTV 474
+GD +D NE NR+LL ++N +G +
Sbjct: 477 ---------------------------------DGD---EDQCNERNRELLAAVNSTGKI 500
Query: 475 YMTHAVVGGIFVIRCAIGATLTEEMHEIKAWKVVQEHA 512
+++H + G FV+R A+GA LTEE H +AW+++Q+HA
Sbjct: 501 FISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHA 538