Miyakogusa Predicted Gene

Lj6g3v1676440.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1676440.1 Non Chatacterized Hit- tr|A5BBY4|A5BBY4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,44.55,5e-17,GLTP,Glycolipid transfer protein domain; no
description,Glycolipid transfer protein domain; GLYCOLIP,CUFF.59753.1
         (206 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G34690.1 | Symbols: ACD11 | Glycolipid transfer protein (GLTP...   286   9e-78
AT4G39670.1 | Symbols:  | Glycolipid transfer protein (GLTP) fam...   217   5e-57

>AT2G34690.1 | Symbols: ACD11 | Glycolipid transfer protein (GLTP)
           family protein | chr2:14630425-14631779 FORWARD
           LENGTH=206
          Length = 206

 Score =  286 bits (731), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 141/207 (68%), Positives = 164/207 (79%), Gaps = 2/207 (0%)

Query: 1   MADSNGDKTLRLIAGAFKDLASAVADSQKAEVEVAPFSQACSLVSPLFGCLGVAFKFAER 60
           MADS  DK LR I+ AFK LA  + +S   EV V  FS ACSLVSPLFGCLG+AFKFAE 
Sbjct: 1   MADSEADKPLRKISAAFKKLA-IIVNSPNPEVPVTQFSHACSLVSPLFGCLGIAFKFAEM 59

Query: 61  DYVAKVVDLSEASKSIPTLHSLIDRDVQADSVRTAGSHTRNLLRVKRGLDMVRVLFEQML 120
           DYVAKV DL  AS SI TL  ++D+D++AD VR AGSHTRNLLRVKRGLDMV+VLFEQ++
Sbjct: 60  DYVAKVDDLVRASSSISTLVVMMDKDIEADCVRKAGSHTRNLLRVKRGLDMVKVLFEQII 119

Query: 121 VTEG-NSLRDPASKAYEQVFAPYHGWAIRKAVSAGMYLLPTKEQLLQKLNEDEASAKDQM 179
            +EG NSL+DPA+K+Y QVFAP+HGWAIRKAVS GMY LPT+  LL  L EDEA+AK  M
Sbjct: 120 ASEGDNSLKDPATKSYAQVFAPHHGWAIRKAVSLGMYALPTRAHLLNMLKEDEAAAKIHM 179

Query: 180 QIYVSSSASLIQYIDKLFVSRDLGIDW 206
           Q YV+SSA LI Y+D LF+S+ LGIDW
Sbjct: 180 QSYVNSSAPLITYLDNLFLSKQLGIDW 206


>AT4G39670.1 | Symbols:  | Glycolipid transfer protein (GLTP) family
           protein | chr4:18410172-18410861 FORWARD LENGTH=229
          Length = 229

 Score =  217 bits (552), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 100/202 (49%), Positives = 145/202 (71%), Gaps = 5/202 (2%)

Query: 10  LRLIAGAFKDLASAVADSQKAEVE-----VAPFSQACSLVSPLFGCLGVAFKFAERDYVA 64
           L +I  AF+DLA  V   +  E++     +  F  AC+ VS LF CLG AFKFAE +Y+A
Sbjct: 28  LSVITEAFEDLADLVKPQRSDEIDEDELRLDDFCSACTHVSVLFNCLGFAFKFAEMEYIA 87

Query: 65  KVVDLSEASKSIPTLHSLIDRDVQADSVRTAGSHTRNLLRVKRGLDMVRVLFEQMLVTEG 124
           KV DL EASK+  TLH+++D DV+ ++V+T GSH+RNL RV++GLD++R +FEQ L+ + 
Sbjct: 88  KVKDLVEASKTFETLHNILDLDVEKETVKTPGSHSRNLRRVRQGLDLIRAIFEQFLIADD 147

Query: 125 NSLRDPASKAYEQVFAPYHGWAIRKAVSAGMYLLPTKEQLLQKLNEDEASAKDQMQIYVS 184
            SL+D A+ AY +V AP+H WA+R AV AGMY LPT++QLL +LNE + S +  M+ Y+ 
Sbjct: 148 YSLKDAATTAYTEVCAPFHTWAVRTAVYAGMYTLPTRDQLLLRLNETDQSVEKNMRRYME 207

Query: 185 SSASLIQYIDKLFVSRDLGIDW 206
           +S  +I+YIDKL++ R++ +DW
Sbjct: 208 ASRPIIEYIDKLYIERNIKLDW 229