Miyakogusa Predicted Gene

Lj6g3v1653280.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1653280.2 Non Chatacterized Hit- tr|I3SY35|I3SY35_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,95.35,6e-16,
,CUFF.59742.2
         (45 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G14110.1 | Symbols: COP9, CSN8, FUS7, EMB143 | COP9 signaloso...    67   2e-12

>AT4G14110.1 | Symbols: COP9, CSN8, FUS7, EMB143 | COP9 signalosome,
           subunit CSN8 | chr4:8133049-8134867 REVERSE LENGTH=197
          Length = 197

 Score = 67.4 bits (163), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 30/45 (66%), Positives = 37/45 (82%)

Query: 1   MLQQGWTADSVSRMLTVKKQPVVTEQKLDPSKLQRLTEYVFHLEH 45
           +++ GWT D+ S+M +VKKQ V  EQK+D SKLQRLTEYVFHLEH
Sbjct: 153 VVENGWTVDAASQMASVKKQAVKREQKVDSSKLQRLTEYVFHLEH 197