Miyakogusa Predicted Gene

Lj6g3v1653280.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1653280.1 Non Chatacterized Hit- tr|I3SY35|I3SY35_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,89.36,3e-16,
,CUFF.59742.1
         (71 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G14110.1 | Symbols: COP9, CSN8, FUS7, EMB143 | COP9 signaloso...    68   1e-12

>AT4G14110.1 | Symbols: COP9, CSN8, FUS7, EMB143 | COP9 signalosome,
           subunit CSN8 | chr4:8133049-8134867 REVERSE LENGTH=197
          Length = 197

 Score = 68.2 bits (165), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 30/47 (63%), Positives = 38/47 (80%)

Query: 25  SLMLQQGWTADSVSRMLTVKKQPVVTEQKLDPSKLQRLTEYVFHLEH 71
           + +++ GWT D+ S+M +VKKQ V  EQK+D SKLQRLTEYVFHLEH
Sbjct: 151 TYVVENGWTVDAASQMASVKKQAVKREQKVDSSKLQRLTEYVFHLEH 197